Query 002258
Match_columns 946
No_of_seqs 361 out of 1091
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 19:00:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002258.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002258hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz4_A Protein GBS052; SPAB, G 99.2 8.4E-11 2.9E-15 125.0 12.6 148 48-209 29-220 (239)
2 2pz4_A Protein GBS052; SPAB, G 99.1 4.9E-10 1.7E-14 119.1 16.5 164 145-314 29-220 (239)
3 3kpt_A Collagen adhesion prote 98.9 8.5E-08 2.9E-12 107.6 23.4 63 48-110 19-83 (355)
4 1cwv_A Invasin; integrin-bindi 98.9 9.7E-07 3.3E-11 103.1 31.0 293 126-459 28-378 (492)
5 3kpt_A Collagen adhesion prote 98.7 1E-05 3.6E-10 90.6 30.5 62 145-207 19-83 (355)
6 2x9x_A RRGB, cell WALL surface 98.6 3.5E-07 1.2E-11 105.3 17.2 165 147-315 178-417 (444)
7 2x9x_A RRGB, cell WALL surface 98.6 2.7E-07 9.2E-12 106.2 15.8 154 50-210 178-417 (444)
8 1cwv_A Invasin; integrin-bindi 98.6 5.7E-06 1.9E-10 96.6 26.1 299 49-379 40-380 (492)
9 2y1v_A RRGB, cell WALL surface 98.4 1.7E-06 5.8E-11 103.2 15.0 152 50-209 331-571 (605)
10 3tkv_A FDEC fragment B, attach 98.4 2.9E-06 9.9E-11 97.1 16.0 303 49-379 20-383 (414)
11 3irp_X URO-adherence factor A; 98.4 3.2E-07 1.1E-11 104.6 7.1 76 26-103 306-381 (429)
12 3tkv_A FDEC fragment B, attach 98.4 3.4E-06 1.2E-10 96.5 15.6 307 128-459 10-381 (414)
13 2y1v_A RRGB, cell WALL surface 98.3 5.6E-06 1.9E-10 98.8 17.1 165 147-314 331-571 (605)
14 2xtl_A Cell WALL surface ancho 98.2 6.9E-06 2.4E-10 94.4 14.4 163 146-314 177-422 (452)
15 2xtl_A Cell WALL surface ancho 98.1 1.2E-05 4E-10 92.5 13.6 153 50-210 178-423 (452)
16 3irp_X URO-adherence factor A; 98.1 3.9E-06 1.3E-10 95.7 9.2 70 126-196 306-378 (429)
17 1d2p_A Collagen adhesin, CNA; 97.9 0.0052 1.8E-07 68.8 29.3 282 49-381 20-355 (373)
18 1h8l_A Carboxypeptidase GP180 97.8 5.8E-05 2E-09 85.4 10.3 67 326-394 301-369 (380)
19 3mn8_A LP15968P; catalytic dom 97.8 3.6E-05 1.2E-09 88.5 8.4 66 327-393 338-405 (435)
20 2x5p_A FBA2, fibronectin bindi 97.7 4.7E-05 1.6E-09 71.6 7.2 60 49-111 40-100 (121)
21 2pn5_A TEP1R, thioester-contai 97.7 0.021 7.1E-07 74.7 33.8 264 77-378 64-384 (1325)
22 2nsm_A Carboxypeptidase N cata 97.6 0.00011 3.6E-09 84.9 9.6 63 326-390 321-384 (439)
23 2hr0_A Complement C3 beta chai 97.4 0.0057 1.9E-07 73.9 21.2 210 151-379 141-406 (645)
24 1uwy_A Carboxypeptidase M; met 97.4 0.00021 7.4E-09 81.9 8.1 66 326-393 296-364 (426)
25 2x5p_A FBA2, fibronectin bindi 97.2 0.0007 2.4E-08 63.6 8.0 59 145-207 39-99 (121)
26 1h8l_A Carboxypeptidase GP180 97.2 0.00083 2.8E-08 75.9 9.8 69 126-209 301-369 (380)
27 1d2p_A Collagen adhesin, CNA; 97.2 0.44 1.5E-05 53.2 31.5 272 145-459 19-349 (373)
28 2nsm_A Carboxypeptidase N cata 97.1 0.00096 3.3E-08 76.9 9.6 64 126-205 321-384 (439)
29 3mn8_A LP15968P; catalytic dom 97.1 0.00069 2.3E-08 77.9 7.6 70 126-209 337-406 (435)
30 1uwy_A Carboxypeptidase M; met 97.0 0.00076 2.6E-08 77.4 6.9 69 126-208 296-364 (426)
31 3kcp_A Cellulosomal-scaffoldin 96.6 0.0023 7.7E-08 68.9 6.5 83 308-390 140-232 (321)
32 2ww8_A RRGA, cell WALL surface 96.6 0.0025 8.5E-08 79.2 7.8 66 46-111 57-124 (893)
33 3pf2_A Cell WALL surface ancho 96.5 0.0037 1.3E-07 68.7 7.7 64 48-111 194-293 (319)
34 2boy_A 3-chlorocatechol 1,2-di 96.3 0.0037 1.3E-07 65.9 5.5 48 326-373 103-169 (254)
35 2pn5_A TEP1R, thioester-contai 96.2 1.8 6E-05 56.6 31.6 165 180-363 71-263 (1325)
36 2hr0_A Complement C3 beta chai 96.2 0.45 1.5E-05 57.2 24.2 209 53-294 140-406 (645)
37 2ww8_A RRGA, cell WALL surface 96.1 0.0078 2.7E-07 74.8 8.4 65 144-209 58-125 (893)
38 2xsu_A Catechol 1,2 dioxygenas 96.1 0.0088 3E-07 64.8 7.5 48 326-373 137-203 (312)
39 2azq_A Catechol 1,2-dioxygenas 95.9 0.009 3.1E-07 64.8 6.8 48 326-373 133-199 (311)
40 1nkg_A Rhamnogalacturonase B; 95.9 0.026 8.9E-07 65.4 10.9 71 126-211 258-328 (508)
41 2bum_B Protocatechuate 3,4-dio 95.9 0.0094 3.2E-07 62.4 6.4 48 326-373 79-150 (241)
42 3hr6_A SPAA, putative surface- 95.7 0.0081 2.8E-07 68.8 5.7 64 48-111 320-417 (436)
43 2xsu_A Catechol 1,2 dioxygenas 95.7 0.019 6.5E-07 62.2 8.1 54 126-187 137-204 (312)
44 3th1_A Chlorocatechol 1,2-diox 95.7 0.012 4E-07 62.2 6.1 48 326-373 100-166 (260)
45 1dmh_A 1,2-CTD, catechol 1,2-d 95.6 0.01 3.4E-07 64.4 5.3 48 326-373 134-202 (311)
46 3qdh_A Fimbrial structural sub 95.6 0.0078 2.7E-07 65.2 4.4 63 49-111 176-276 (290)
47 1tmx_A Hydroxyquinol 1,2-dioxy 95.5 0.012 3.9E-07 63.4 5.6 49 326-374 134-200 (293)
48 3qva_A Transthyretin-like prot 95.5 0.015 5.1E-07 53.7 5.4 58 128-193 12-72 (116)
49 1nkg_A Rhamnogalacturonase B; 95.5 0.026 9E-07 65.4 8.8 65 326-394 258-326 (508)
50 3kcp_A Cellulosomal-scaffoldin 95.5 0.014 4.8E-07 62.8 5.9 73 202-294 139-221 (321)
51 2b39_A C3; thioester, immune d 95.5 0.073 2.5E-06 71.1 14.1 214 151-379 162-426 (1661)
52 3t63_M 3,4-PCD, protocatechuat 95.5 0.014 4.9E-07 60.8 5.8 48 326-373 78-149 (238)
53 2azq_A Catechol 1,2-dioxygenas 95.4 0.027 9.3E-07 61.0 8.0 55 126-188 133-201 (311)
54 2boy_A 3-chlorocatechol 1,2-di 95.4 0.02 6.8E-07 60.4 6.6 55 126-188 103-171 (254)
55 3hhy_A 1,2-CTD, catechol 1,2-d 95.3 0.019 6.5E-07 61.3 6.1 49 326-374 132-199 (280)
56 3n9t_A PNPC; phospholipid bind 95.3 0.019 6.4E-07 61.7 6.1 49 326-374 130-197 (290)
57 3cu7_A Complement C5; Mg domai 95.3 0.27 9.3E-06 65.7 18.5 210 150-377 158-437 (1676)
58 2bum_A Protocatechuate 3,4-dio 95.2 0.015 5.1E-07 59.8 4.9 48 326-373 53-125 (209)
59 3t63_A 3,4-PCD, protocatechuat 95.2 0.018 6.2E-07 58.6 5.4 49 326-374 49-117 (200)
60 2bum_B Protocatechuate 3,4-dio 95.1 0.049 1.7E-06 57.0 8.7 69 221-289 79-151 (241)
61 3th1_A Chlorocatechol 1,2-diox 95.1 0.027 9.2E-07 59.5 6.7 56 126-189 100-169 (260)
62 3prx_B Cobra venom factor; imm 95.1 3.1 0.00011 55.2 27.4 228 125-377 140-415 (1642)
63 1dmh_A 1,2-CTD, catechol 1,2-d 95.0 0.039 1.3E-06 59.8 7.6 69 221-289 134-203 (311)
64 3hrz_A Cobra venom factor; ser 95.0 1.8 6.2E-05 51.8 23.0 208 151-377 139-393 (627)
65 3t63_A 3,4-PCD, protocatechuat 94.9 0.039 1.3E-06 56.1 7.0 67 221-289 49-117 (200)
66 4acq_A Alpha-2-macroglobulin; 94.9 9 0.00031 50.3 31.0 213 146-377 133-402 (1451)
67 3t63_M 3,4-PCD, protocatechuat 94.9 0.043 1.5E-06 57.2 7.2 54 126-187 78-150 (238)
68 3e8v_A Possible transglutamina 94.8 0.058 2E-06 46.5 6.7 52 328-380 3-62 (82)
69 2g2n_A Transthyretin-like prot 94.8 0.03 1E-06 51.7 5.2 59 128-193 6-71 (114)
70 3pf2_A Cell WALL surface ancho 94.8 0.043 1.5E-06 60.2 7.4 65 145-210 194-295 (319)
71 3o5u_A Chlorocatechol 1,2-diox 94.7 0.029 9.9E-07 59.2 5.6 48 326-373 104-171 (257)
72 3hhy_A 1,2-CTD, catechol 1,2-d 94.7 0.048 1.6E-06 58.2 7.3 68 221-290 132-200 (280)
73 1tmx_A Hydroxyquinol 1,2-dioxy 94.7 0.037 1.3E-06 59.5 6.4 67 221-290 134-201 (293)
74 3n9t_A PNPC; phospholipid bind 94.6 0.057 1.9E-06 57.9 7.5 68 221-290 130-198 (290)
75 3pdd_A Glycoside hydrolase, fa 94.6 2.2 7.7E-05 42.8 19.1 144 326-480 19-179 (190)
76 3uxf_A Fimbrial subunit type 1 94.5 0.013 4.3E-07 68.1 2.4 65 47-111 368-470 (488)
77 3t1w_A Four-domain fibronectin 94.5 6.7 0.00023 42.6 28.7 269 267-555 52-351 (375)
78 1f86_A Transthyretin Thr119Met 94.4 0.036 1.2E-06 51.3 4.8 59 128-193 3-69 (115)
79 3o5u_A Chlorocatechol 1,2-diox 94.3 0.062 2.1E-06 56.7 6.8 68 221-289 104-172 (257)
80 3qec_A Putative carbohydrate b 94.3 0.026 8.8E-07 54.7 3.6 44 886-929 86-134 (150)
81 2bum_A Protocatechuate 3,4-dio 94.2 0.065 2.2E-06 55.0 6.8 68 221-288 53-125 (209)
82 3qec_A Putative carbohydrate b 94.2 0.03 1E-06 54.2 3.8 29 161-189 86-114 (150)
83 2h0e_A Transthyretin-like prot 94.1 0.031 1.1E-06 52.1 3.6 59 128-193 11-74 (121)
84 1xpn_A Hypothetical protein PA 93.9 0.039 1.3E-06 54.4 4.1 28 162-189 107-134 (170)
85 1oo2_A Transthyretin; retinol- 93.9 0.043 1.5E-06 51.0 4.2 59 128-193 4-70 (119)
86 2h4e_A Transthyretin; amyloid, 93.9 0.058 2E-06 50.7 5.0 59 128-193 12-78 (127)
87 4fxk_A Complement C4 beta chai 93.8 3.6 0.00012 49.1 22.2 213 151-378 155-432 (656)
88 3qdh_A Fimbrial structural sub 93.7 0.048 1.6E-06 59.0 4.8 65 145-209 175-277 (290)
89 1wlh_A Gelation factor; ABP-12 93.6 2.2 7.5E-05 46.2 18.1 207 74-312 64-293 (311)
90 1xpn_A Hypothetical protein PA 93.6 0.051 1.7E-06 53.5 4.3 29 263-291 106-134 (170)
91 3iwv_A 5-hydroxyisourate hydro 93.5 0.035 1.2E-06 52.8 2.9 60 127-193 27-95 (138)
92 2xi9_A Ancillary protein 1; ce 93.2 0.14 4.8E-06 58.3 7.6 61 48-111 38-101 (457)
93 4ank_A Transthyretin; hormone 93.0 0.096 3.3E-06 50.5 5.1 59 128-193 32-98 (147)
94 3pdd_A Glycoside hydrolase, fa 93.0 3.7 0.00013 41.2 17.2 102 275-379 52-163 (190)
95 3e8v_A Possible transglutamina 92.7 0.37 1.3E-05 41.5 7.8 49 145-194 12-63 (82)
96 1qfh_A Protein (gelation facto 92.7 1.4 4.9E-05 44.9 13.9 135 52-196 44-184 (212)
97 3hrz_A Cobra venom factor; ser 92.6 12 0.00041 44.6 23.9 209 53-294 138-395 (627)
98 3hr6_A SPAA, putative surface- 92.4 0.1 3.4E-06 59.7 5.2 65 145-210 320-419 (436)
99 2g2n_A Transthyretin-like prot 92.2 0.27 9.2E-06 45.3 6.8 56 223-291 6-67 (114)
100 3qva_A Transthyretin-like prot 92.2 0.11 3.9E-06 47.8 4.2 54 327-380 11-72 (116)
101 1f86_A Transthyretin Thr119Met 91.6 0.3 1E-05 45.1 6.4 57 223-291 3-65 (115)
102 2x9z_A RRGB, cell WALL surface 91.2 0.7 2.4E-05 49.1 9.9 58 227-300 164-228 (262)
103 1ti6_B Pyrogallol hydroxytrans 91.0 0.64 2.2E-05 49.7 9.3 50 145-196 207-256 (274)
104 2h4e_A Transthyretin; amyloid, 91.0 0.7 2.4E-05 43.3 8.3 57 223-291 12-74 (127)
105 1oo2_A Transthyretin; retinol- 90.7 0.58 2E-05 43.4 7.4 57 223-291 4-66 (119)
106 1tdq_A Tenascin-R; extracellul 90.6 17 0.00059 37.4 23.2 184 356-555 65-268 (283)
107 3uxf_A Fimbrial subunit type 1 90.4 0.21 7.3E-06 57.8 5.2 84 230-315 368-472 (488)
108 2k7p_A Filamin-A; IG-like, ABP 90.4 11 0.00039 37.5 17.4 133 50-194 32-174 (188)
109 2b39_A C3; thioester, immune d 90.2 2.6 8.8E-05 56.3 16.0 42 53-94 161-210 (1661)
110 2x9z_A RRGB, cell WALL surface 90.1 0.47 1.6E-05 50.5 7.1 51 146-196 172-228 (262)
111 3cu7_A Complement C5; Mg domai 89.9 5.9 0.0002 53.0 19.1 42 53-94 158-206 (1676)
112 3iwv_A 5-hydroxyisourate hydro 89.6 0.34 1.2E-05 46.0 4.9 58 223-291 28-91 (138)
113 1wlh_A Gelation factor; ABP-12 89.4 6.6 0.00023 42.3 16.0 135 52-195 143-282 (311)
114 4ank_A Transthyretin; hormone 89.4 0.32 1.1E-05 46.9 4.6 53 328-380 32-98 (147)
115 3prx_B Cobra venom factor; imm 89.4 20 0.00069 47.5 23.2 209 53-293 160-416 (1642)
116 2h0e_A Transthyretin-like prot 89.0 0.47 1.6E-05 44.1 5.4 53 223-291 11-70 (121)
117 1ti6_B Pyrogallol hydroxytrans 88.9 1.3 4.4E-05 47.3 9.6 68 227-318 203-270 (274)
118 2xi9_A Ancillary protein 1; ce 88.9 0.42 1.4E-05 54.4 5.9 63 144-210 37-103 (457)
119 1d2o_A Collagen adhesin, CNA; 88.4 11 0.00038 37.7 15.5 128 50-196 21-170 (187)
120 4fxt_A Uncharacterized protein 88.4 11 0.00037 38.1 15.3 77 219-312 6-86 (202)
121 2j3s_A Filamin-A; cytoskeleton 87.3 20 0.00067 38.2 17.8 31 266-296 147-179 (288)
122 2k7p_A Filamin-A; IG-like, ABP 86.4 20 0.00069 35.6 16.2 127 150-295 35-173 (188)
123 1fnf_A Fibronectin; RGD, extra 86.4 38 0.0013 36.2 37.1 205 337-555 120-349 (368)
124 4acq_A Alpha-2-macroglobulin; 85.9 99 0.0034 40.5 29.4 95 183-293 77-187 (1451)
125 1f00_I Intimin; immunoglobulin 85.7 5.6 0.00019 42.5 12.1 52 327-379 22-81 (282)
126 4fxk_A Complement C4 beta chai 85.2 59 0.002 38.4 22.4 43 53-95 154-202 (656)
127 1f00_I Intimin; immunoglobulin 84.8 3.9 0.00013 43.7 10.4 58 222-294 22-81 (282)
128 3hn5_A Putative exported prote 84.4 9 0.00031 39.0 12.3 59 218-291 8-71 (215)
129 2k7q_A Filamin-A; IG-like, ABP 84.3 16 0.00056 36.3 14.4 50 146-195 28-80 (191)
130 3t1w_A Four-domain fibronectin 83.8 51 0.0017 35.4 34.4 285 147-460 31-351 (375)
131 1r6v_A Subtilisin-like serine 82.9 7 0.00024 47.0 12.6 131 329-459 451-611 (671)
132 1r6v_A Subtilisin-like serine 82.9 29 0.001 41.6 18.0 46 146-192 461-506 (671)
133 2k7q_A Filamin-A; IG-like, ABP 82.5 29 0.00098 34.5 15.3 135 49-195 28-175 (191)
134 1qfh_A Protein (gelation facto 81.0 39 0.0013 34.0 16.0 138 149-312 44-194 (212)
135 3hn5_A Putative exported prote 78.2 12 0.0004 38.2 10.4 57 320-378 5-73 (215)
136 3r8q_A Fibronectin; heparin, F 77.9 67 0.0023 33.0 24.7 44 147-190 47-93 (290)
137 3r8q_A Fibronectin; heparin, F 76.4 73 0.0025 32.7 23.0 185 356-555 71-275 (290)
138 3d33_A Domain of unknown funct 75.4 4.6 0.00016 36.7 6.0 49 50-98 47-101 (108)
139 3uaf_A TTR-52; beta barrel/san 74.3 3 0.0001 38.6 4.5 44 126-178 5-56 (117)
140 3pe9_A Fibronectin(III)-like m 73.7 9.4 0.00032 34.0 7.6 52 326-379 19-71 (98)
141 3rfz_B Outer membrane usher pr 72.8 19 0.00066 44.4 12.6 106 268-376 692-801 (843)
142 4fxt_A Uncharacterized protein 72.2 26 0.00091 35.3 11.2 55 323-379 5-70 (202)
143 3uaf_A TTR-52; beta barrel/san 69.8 7 0.00024 36.0 5.9 51 221-281 5-57 (117)
144 3osv_A Flagellar basal-BODY RO 68.4 23 0.00079 33.4 9.5 45 146-190 34-89 (138)
145 2j3s_A Filamin-A; cytoskeleton 67.2 1.3E+02 0.0044 31.7 22.2 130 53-195 38-180 (288)
146 2p9r_A Alpha-2-M, alpha-2-macr 67.1 23 0.00078 31.2 8.7 46 146-191 31-85 (102)
147 2l4o_A Cell WALL surface ancho 64.3 2.9 0.0001 41.6 2.3 23 167-190 103-127 (181)
148 1d2o_A Collagen adhesin, CNA; 61.7 1.3E+02 0.0045 29.8 17.2 121 145-290 19-160 (187)
149 3c12_A FLGD, flagellar protein 60.4 16 0.00054 34.5 6.7 44 147-190 37-91 (138)
150 3c12_A FLGD, flagellar protein 60.3 46 0.0016 31.2 9.9 13 448-460 80-92 (138)
151 3sd2_A Putative member of DUF3 59.3 24 0.00081 31.5 7.0 49 50-98 43-94 (101)
152 1fnf_A Fibronectin; RGD, extra 57.0 2E+02 0.0067 30.4 33.7 103 355-461 235-350 (368)
153 2l4o_A Cell WALL surface ancho 56.3 7.5 0.00026 38.6 3.7 25 268-293 102-128 (181)
154 2p9r_A Alpha-2-M, alpha-2-macr 55.5 34 0.0012 30.0 7.7 43 53-95 37-86 (102)
155 1qr4_A Protein (tenascin); fib 54.8 1.4E+02 0.0049 28.1 15.5 102 440-554 56-166 (186)
156 1tdq_A Tenascin-R; extracellul 54.6 1.8E+02 0.0063 29.3 25.5 40 339-378 223-268 (283)
157 2wz8_A Cellulosome protein doc 53.8 14 0.00047 35.8 5.0 79 536-630 47-132 (156)
158 4eiu_A Uncharacterized hypothe 52.4 48 0.0016 34.4 9.0 56 321-376 5-76 (249)
159 3d33_A Domain of unknown funct 50.3 34 0.0011 31.0 6.6 51 145-195 45-101 (108)
160 3l48_A Outer membrane usher pr 47.4 25 0.00087 30.9 5.3 47 327-373 9-58 (94)
161 3osv_A Flagellar basal-BODY RO 45.8 25 0.00084 33.2 5.3 42 52-93 37-89 (138)
162 2gee_A Hypothetical protein; f 44.7 2.2E+02 0.0076 27.4 15.0 105 269-378 72-188 (203)
163 1qr4_A Protein (tenascin); fib 44.6 2E+02 0.007 26.9 15.6 44 147-190 33-77 (186)
164 3sd2_A Putative member of DUF3 42.8 1.6E+02 0.0055 26.2 9.5 52 145-196 41-95 (101)
165 4eiu_A Uncharacterized hypothe 42.4 2.7E+02 0.0091 28.9 12.6 70 121-191 5-78 (249)
166 2ee9_A Filamin-B; beta-sandwic 41.6 78 0.0027 27.8 7.5 43 50-93 28-74 (95)
167 4a2l_A BT_4663, two-component 41.1 20 0.00069 43.5 5.0 40 533-579 741-782 (795)
168 2w1n_A O-GLCNACASE NAGJ; hexos 40.7 2.4E+02 0.0081 28.9 11.7 42 336-377 176-219 (238)
169 3v9f_A Two-component system se 40.4 30 0.001 41.8 6.4 40 532-578 734-775 (781)
170 2d7n_A Filamin-C; beta-sandwic 38.5 36 0.0012 29.8 4.8 41 52-93 22-66 (93)
171 3ott_A Two-component system se 36.8 23 0.00078 42.8 4.5 38 535-579 709-748 (758)
172 2dlg_A Filamin-B; beta-sandwic 36.5 63 0.0021 28.7 6.2 43 51-94 30-76 (102)
173 2c9r_A COPC, copper resistance 35.6 54 0.0019 29.2 5.6 27 177-205 72-101 (102)
174 2ds4_A Tripartite motif protei 35.4 83 0.0029 27.8 7.0 42 53-94 50-96 (113)
175 2xwx_A GBPA, glcnac-binding pr 35.4 2.6E+02 0.009 31.0 12.3 47 326-377 325-372 (391)
176 3p4l_A Neogenin; iron homeosta 34.3 3.2E+02 0.011 26.2 13.4 41 338-378 136-186 (211)
177 3l48_A Outer membrane usher pr 32.9 36 0.0012 29.9 3.9 53 852-909 2-55 (94)
178 3rgh_A Filamin-A; cell adhesio 32.6 1.3E+02 0.0046 26.2 7.7 23 532-554 59-83 (100)
179 3ubh_A Neural-cadherin; cell a 31.5 5.6E+02 0.019 28.2 16.4 71 546-618 180-255 (419)
180 2dia_A Filamin-B; beta-sandwic 31.4 65 0.0022 28.9 5.6 41 52-93 42-86 (113)
181 3g3l_A Putative uncharacterize 30.4 43 0.0015 33.5 4.3 54 325-383 14-69 (327)
182 3ubf_A Neural-cadherin; cell a 30.1 5.1E+02 0.017 27.2 15.8 73 545-619 174-251 (316)
183 2dia_A Filamin-B; beta-sandwic 29.3 1.8E+02 0.0062 25.9 8.2 23 532-554 62-86 (113)
184 3rgh_A Filamin-A; cell adhesio 29.3 68 0.0023 28.2 5.2 40 53-93 40-83 (100)
185 1nqj_A Class 1 collagenase; be 29.0 1.1E+02 0.0038 28.0 6.7 60 850-913 43-104 (119)
186 2h41_A Fibronectin; beta sandw 27.7 1E+02 0.0035 26.8 6.0 28 527-554 50-78 (95)
187 2dmb_A Filamin-B; beta-sandwic 27.3 1.4E+02 0.0049 27.2 7.2 22 533-554 64-87 (124)
188 2c9r_A COPC, copper resistance 27.1 67 0.0023 28.5 4.7 45 48-92 28-84 (102)
189 2ee9_A Filamin-B; beta-sandwic 27.1 2E+02 0.0068 25.2 7.7 31 266-296 46-78 (95)
190 2dj4_A Filamin-B; beta-sandwic 27.0 60 0.002 28.9 4.4 42 52-93 43-87 (108)
191 1lyq_A PCOC copper resistance 26.8 71 0.0024 28.5 4.8 28 176-205 73-103 (104)
192 3fcg_A F1 capsule-anchoring pr 26.6 1.7E+02 0.0058 25.5 7.0 45 49-95 22-70 (90)
193 3ppe_A Vascular endothelial ca 24.8 3.4E+02 0.012 26.7 10.1 82 546-631 67-159 (203)
194 3v9f_A Two-component system se 24.7 59 0.002 39.2 5.2 25 269-293 733-757 (781)
195 3klq_A Putative pilus anchorin 24.3 2.2E+02 0.0074 26.9 7.8 61 418-479 24-88 (141)
196 4a2l_A BT_4663, two-component 24.2 62 0.0021 39.1 5.3 42 270-311 740-781 (795)
197 2d7m_A Filamin-C; beta-sandwic 24.1 67 0.0023 28.9 4.2 41 53-93 45-88 (115)
198 3pe9_A Fibronectin(III)-like m 23.9 3.4E+02 0.012 23.8 8.6 66 406-480 20-87 (98)
199 3mvs_A Cadherin-23, otocadheri 23.7 4.3E+02 0.015 26.0 10.7 79 546-632 76-163 (210)
200 2dmb_A Filamin-B; beta-sandwic 23.7 51 0.0017 30.4 3.3 41 52-93 43-87 (124)
201 1lyq_A PCOC copper resistance 22.8 69 0.0024 28.6 3.9 45 48-92 29-86 (104)
202 2d7n_A Filamin-C; beta-sandwic 22.4 2.1E+02 0.0072 24.8 7.0 43 418-460 22-67 (93)
203 3cnk_A Filamin-A; FLNA24, X-RA 22.2 88 0.003 26.6 4.4 40 53-93 31-74 (89)
204 3ott_A Two-component system se 22.0 68 0.0023 38.5 5.0 40 272-311 708-747 (758)
205 2dlg_A Filamin-B; beta-sandwic 20.4 2.7E+02 0.0091 24.5 7.3 50 147-196 29-81 (102)
No 1
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=99.18 E-value=8.4e-11 Score=124.97 Aligned_cols=148 Identities=18% Similarity=0.169 Sum_probs=109.2
Q ss_pred CccccceEEEEEeCCCC----------------------EEEEEEeCCCcEEEcCCCCCccEEE-EEEcCCCcccCCcee
Q 002258 48 RLDYSHVTVELRTLDGL----------------------VKESTQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKV 104 (946)
Q Consensus 48 ~i~~sgv~V~L~~~~G~----------------------~~~~t~t~~nG~y~ip~l~~G~Y~l-~v~~P~G~~~~p~~v 104 (946)
.-+|+||+|+|+..++. .+.+.+|+.+|.+.+..|++|.|.| ++++|.| ...+..+
T Consensus 29 g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~v~Et~aP~G-~l~~~~~ 107 (239)
T 2pz4_A 29 GTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEK-NRNVSAF 107 (239)
T ss_dssp CEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEE-CTTBCCE
T ss_pred CCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCCCeeEEEEEEECCCC-cccCceE
Confidence 34689999999986543 5666788999999999999999999 7889999 8888888
Q ss_pred EEEEcCCCcCCCceeeEEEeCcEEEeEE----EeccCCccccCCCCCCcceEEEEEeCCCcEE---------------EE
Q 002258 105 AVTVDDTGCNGNEDINFRFTGFTLLGRV----VGAIGGESCLDKGGGPSNVNVELLSHSGDLI---------------SS 165 (946)
Q Consensus 105 ~v~vd~~~~s~~~dinf~~~g~~IsG~V----~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v---------------~~ 165 (946)
.+.+..+ +.+....-...|.+ .+..| .++.+|+||.++|++.+|..+ ..
T Consensus 108 ~v~i~~d-------v~v~~~n~~~~g~~~i~K~d~~~-----~~~~~L~GA~F~l~~~~g~~~~~~~~g~~~~~~~~~~~ 175 (239)
T 2pz4_A 108 LVDLSED-------KVIYPKIIWSTGELDLLKVGVDG-----DTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKH 175 (239)
T ss_dssp EEEESSC-------EEECCCBCCCEEEEEEEEEEEET-----TEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSC
T ss_pred EEEeCCC-------eEEEEeeeeeeccEEEEEeccCC-----CCCcccCCCEEEEEeCCCCEEEeecccceecccccceE
Confidence 8887653 22222222234433 12111 123799999999999888543 46
Q ss_pred EEeCCCceEEEccccCceEEEEEec--CCceEEeeccEEEEEccCC
Q 002258 166 VITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEVELGFEN 209 (946)
Q Consensus 166 ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~~~~~~~v~v~~~~ 209 (946)
.+||++|.+.|.+|++|+|+|.+.. .||.+. .....|+|..+.
T Consensus 176 ~~Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~~~~f~i~~~~ 220 (239)
T 2pz4_A 176 LETDSSGHIRISGLIHGDYVLKEIETQSGYQIG-QAETAVTIEKSK 220 (239)
T ss_dssp EECCTTSEEEEEEEESEEEEEEEEECCTTBCCC-CSEEEEEECTTS
T ss_pred EEECCCCeEEECCCCCceEEEEEEECCCCcCcC-CccEEEEEeCCC
Confidence 8999999999999999999998854 488866 333677776554
No 2
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=99.15 E-value=4.9e-10 Score=119.06 Aligned_cols=164 Identities=16% Similarity=0.156 Sum_probs=103.5
Q ss_pred CCCCcceEEEEEeCCC----------------------cEEEEEEeCCCceEEEccccCceEEEEEec-CCceEEeeccE
Q 002258 145 GGGPSNVNVELLSHSG----------------------DLISSVITSSEGSYLFKNIIPGKYKLRASH-PNLSVEVRGST 201 (946)
Q Consensus 145 g~plaGv~V~L~~~~g----------------------~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~-~g~~~~~~~~~ 201 (946)
+.||+||.++|+..++ +.+.+.+||++|.+.|.+|++|+|.|++.. |.-.+. ....
T Consensus 29 g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~v~Et~aP~G~l~-~~~~ 107 (239)
T 2pz4_A 29 GTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRN-VSAF 107 (239)
T ss_dssp CEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEECTT-BCCE
T ss_pred CCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCCCeeEEEEEEECCCCccc-CceE
Confidence 6899999999997432 367889999999999999999999999864 422322 1225
Q ss_pred EEEEccCCeeeeeeeeccceEEeE-EEeeCC---CceeceEEEEEECCCCcccCC-CCCCCccCccceeeEEEecCCceE
Q 002258 202 EVELGFENGEVDDIFFAPGYEIRG-LVVAQG---NPILGVHIYLYSDDVGKVDCP-QGSGNALGERKALCHAVSDADGKF 276 (946)
Q Consensus 202 ~v~v~~~~~~v~~~l~v~g~~v~G-~V~~~G---~Pi~Ga~V~L~~~~~~~~~c~-~g~~~~~~~g~~~~~~~TD~~G~f 276 (946)
.|++..+ ..+...-...-..+.- ++..+| .+|+||.|.|+..++..+... .|.. ..+.......+||++|.+
T Consensus 108 ~v~i~~d-v~v~~~n~~~~g~~~i~K~d~~~~~~~~L~GA~F~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~Td~~G~~ 184 (239)
T 2pz4_A 108 LVDLSED-KVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVH--SQDIDAAKHLETDSSGHI 184 (239)
T ss_dssp EEEESSC-EEECCCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEE--CCSTTCBSCEECCTTSEE
T ss_pred EEEeCCC-eEEEEeeeeeeccEEEEEeccCCCCCcccCCCEEEEEeCCCCEEEeecccce--ecccccceEEEECCCCeE
Confidence 5666543 2221100000111111 222334 899999999999765422100 0000 000011246799999999
Q ss_pred EECCcCCeeEEEEEEEcCCceEEEecCceEEEEEeccc
Q 002258 277 MFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRHQH 314 (946)
Q Consensus 277 ~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~ 314 (946)
.|.+|++|+|+|++.....++. +....+.|+|..+.
T Consensus 185 ~~~~L~~G~Y~l~EtkAP~GY~--l~~~~~~f~i~~~~ 220 (239)
T 2pz4_A 185 RISGLIHGDYVLKEIETQSGYQ--IGQAETAVTIEKSK 220 (239)
T ss_dssp EEEEEESEEEEEEEEECCTTBC--CCCSEEEEEECTTS
T ss_pred EECCCCCceEEEEEEECCCCcC--cCCccEEEEEeCCC
Confidence 9999999999999976655543 34455777777654
No 3
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=98.92 E-value=8.5e-08 Score=107.62 Aligned_cols=63 Identities=17% Similarity=0.282 Sum_probs=53.8
Q ss_pred CccccceEEEEEeCCCCEEE-EEEeCCCcEEEcCCCCCccEEE-EEEcCCCcccCCceeEEEEcC
Q 002258 48 RLDYSHVTVELRTLDGLVKE-STQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDD 110 (946)
Q Consensus 48 ~i~~sgv~V~L~~~~G~~~~-~t~t~~nG~y~ip~l~~G~Y~l-~v~~P~G~~~~p~~v~v~vd~ 110 (946)
.-.|+||+|+|++.+|..+. ..+|+.+|.+.+..|++|.|.| +..+|.||...+..+++.|..
T Consensus 19 ~~~L~GA~F~l~~~~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~aP~GY~~~~~~~~f~v~~ 83 (355)
T 3kpt_A 19 EKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKN 83 (355)
T ss_dssp GCBCCSCEEEEEETTSCEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCCCEEEEECS
T ss_pred CCCcCCcEEEEEECCCCEEEEEEEECCCCeEEECCcCCceEEEEEEeCCCCeEcCCceEEEEEec
Confidence 44689999999999998874 4577889999999999999999 788999999988777777765
No 4
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=98.88 E-value=9.7e-07 Score=103.08 Aligned_cols=293 Identities=15% Similarity=0.146 Sum_probs=171.8
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEE--EEEEeCCCceEEEc--cccCceEEEEEecCCceEEeeccE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLI--SSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGST 201 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v--~~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~~~~~~~ 201 (946)
..++-+|+++. |.|++|..|.+...+|..+ .+.+||++|.+.+. .-.+|.|.|.+...+-.. +.
T Consensus 28 ~~ltatV~D~~--------Gnpv~g~~Vtf~~~~g~~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~s~----s~ 95 (492)
T 1cwv_A 28 ITVEFTVADFE--------GKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQ----SV 95 (492)
T ss_dssp EEEEEEEECTT--------SCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTEEE----EE
T ss_pred EEEEEEEEcCC--------CCCCCCCEEEEEECCCccccccceeeCCCceEEEEEEcCcceEEEEEEEECCccc----ee
Confidence 34666788763 6899999999987666432 47899999999876 347999999998776322 23
Q ss_pred EEEEccCCee-------ee-eeeeccc---eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEE
Q 002258 202 EVELGFENGE-------VD-DIFFAPG---YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAV 269 (946)
Q Consensus 202 ~v~v~~~~~~-------v~-~~l~v~g---~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~ 269 (946)
.+++..+... +. ......| ..+.-+|++ .|+||+|+.|.+....+. +...+
T Consensus 96 ~v~f~a~~~~a~~s~l~~~~~~~~A~g~~~~tltatv~Da~GNpv~g~~Vtf~~~~g~-----------------~~~~T 158 (492)
T 1cwv_A 96 DTHFVKGTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGN-----------------MGVIT 158 (492)
T ss_dssp EEEEECCCBCGGGCEEEEESSEEETTSSCCEEEEEECBBTTSCBCCSCCEEEEESSSE-----------------ECCCE
T ss_pred EEEEeeccCcccceeEEEeccceecCCceeEEEEEEEEcCCCCCcCCcEEEEEECCCc-----------------eeeeE
Confidence 3444333211 11 1122222 355566665 599999999998765321 23356
Q ss_pred ecCCceEEE--CCcCCeeEEEEEEEcCCceE-----EEecC------ceEEEEEeccceeeeceeEE---EeeEEEeEEE
Q 002258 270 SDADGKFMF--KSVPCGQYELVPHYKGENTV-----FDVSP------SLVSMSVRHQHVTVPEKFQV---TGFSVGGRVV 333 (946)
Q Consensus 270 TD~~G~f~f--~~Lp~G~Y~v~~~~~~~~~~-----~~~~P------~~~~vtV~~~~~~l~~~f~~---~g~sV~G~V~ 333 (946)
+|++|.+.+ ....+|.|+|.+...+.... +.+.+ ....+++..+. ... ....+.-+|.
T Consensus 159 td~~G~at~tlts~~aG~~tVtA~v~g~~~~~~s~~vtf~a~~~~~~~~~~l~v~~~~------~~A~g~~~~tltatv~ 232 (492)
T 1cwv_A 159 DHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVPSVTVNFTADPIPDAGRSSFTVSTPD------ILADGTMSSTLSFVPV 232 (492)
T ss_dssp ECSSSEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEEEECCSSCCTTTCEEEESCSE------EETTSCCCEEEEEECB
T ss_pred ecCCcEEEEEEEccCceEEEEEEEECCccccccceEEEEEccCccccceeeEeecccc------eeeCCcceEEEEEEEE
Confidence 789999877 44568999999976553221 11110 01112222111 111 1246788899
Q ss_pred cCCCCeeeceE-EEE--ccEEe---eEeCCCceEEEccc--CCceEEEEEEeccceeccee-eEEEccCcceeceEEEee
Q 002258 334 DENDMGVEGVK-ILV--DGHER---SITDRDGYYKLDQV--TSNRYTIEAVKVHYKFNKLK-EYMVLPNMASIADIKAIS 404 (946)
Q Consensus 334 d~~G~pl~ga~-V~l--~G~~~---~~TD~~G~f~~~~L--~pG~Y~I~a~~~~y~~~~~~-~v~v~p~~~~i~dI~~~~ 404 (946)
|.+|+||+|.. |.+ +|..+ ..||.+|.|+..-. .+|.++|.+...+......+ .+.+.+. ..+..|..
T Consensus 233 D~~GNpv~g~~~V~f~~~G~~v~~s~~T~~~G~~t~t~t~~~aG~~tVtA~~~g~~~~~~~~~i~f~~~-~~~~~i~v-- 309 (492)
T 1cwv_A 233 DKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVVGNSVGDVTITPQVDTLILSTLQKKISLFPV-PTLTGILV-- 309 (492)
T ss_dssp CTTSCBCCSCCSEEEEEEESCCEECCCEECSSCEEEEEECSSCEEEEEEEEETTEECGGGCEEEEEECC-CCEEEEEE--
T ss_pred CCCCCCccCCceEEEecCCceeeeeeEecCCceEEEEEEcCcceEEEEEEEECCcccccccceEEEEee-cccceEEe--
Confidence 99999999987 776 55433 36899999887422 57999999988775443321 2444442 12333322
Q ss_pred eEEEEEEEEcCC------cccEEEEEEeCCC---ccc-------ceeeeeCCceEEEEE-EcCeeEEEEEEe
Q 002258 405 YDICGVVRTVGS------GNKVKVALTHGPD---KVK-------PQVKQTDNNGNFCFE-VPPGEYRLSAMA 459 (946)
Q Consensus 405 ~~v~G~V~~~~~------~~~a~VtL~~~~~---~~~-------~~~~~Td~~G~F~f~-l~pG~Y~v~~~~ 459 (946)
.|.-...+. ...+.+++..... +.. .....+|++|.-.|. -..+..+|.+..
T Consensus 310 ---ng~~~~~~~gfP~tgf~~A~f~~~~~~~~~~n~~y~wsss~~~~~tvd~~G~vt~~~~~~~~vtITat~ 378 (492)
T 1cwv_A 310 ---NGQNFATDKGFPKTIFKNATFQLQMDNDVANNTQYEWSSSFTPNVSVNDQGQVTITYQTYSEVAVTAKS 378 (492)
T ss_dssp ---TTEEECTTSCCCSEEETTCEEEEEETTCGGGGGGEEEEESSTTTEEECTTCEEEECSCCSSCEEEEEEE
T ss_pred ---ccccccccCCCCceeEEeEEEEEecCCccccCCceeecccCcceEEECCCceEEEEecCCCEEEEEEEe
Confidence 111111110 1223444421110 000 124577999999888 444556777765
No 5
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=98.69 E-value=1e-05 Score=90.62 Aligned_cols=62 Identities=11% Similarity=0.205 Sum_probs=50.9
Q ss_pred CCCCcceEEEEEeCCCcEE-EEEEeCCCceEEEccccCceEEEEEec--CCceEEeeccEEEEEcc
Q 002258 145 GGGPSNVNVELLSHSGDLI-SSVITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEVELGF 207 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~~v-~~ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~~~~~~~v~v~~ 207 (946)
+.+|+||.++|++.+|..+ ...+||++|.+.|.+|++|.|.|.+.. .||.+. .....|.|..
T Consensus 19 ~~~L~GA~F~l~~~~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~aP~GY~~~-~~~~~f~v~~ 83 (355)
T 3kpt_A 19 EKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVID-PTKREFFVKN 83 (355)
T ss_dssp GCBCCSCEEEEEETTSCEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCC-CCCEEEEECS
T ss_pred CCCcCCcEEEEEECCCCEEEEEEEECCCCeEEECCcCCceEEEEEEeCCCCeEcC-CceEEEEEec
Confidence 6899999999999988766 577999999999999999999999864 378765 2236666653
No 6
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=98.65 E-value=3.5e-07 Score=105.26 Aligned_cols=165 Identities=13% Similarity=0.162 Sum_probs=103.0
Q ss_pred CCcceEEEEEeCC-CcE-EEEEEeCCCceEEEccc-cCceEEEEEec-CCceEEe--e-ccEEEEEccCCe---e-e--e
Q 002258 147 GPSNVNVELLSHS-GDL-ISSVITSSEGSYLFKNI-IPGKYKLRASH-PNLSVEV--R-GSTEVELGFENG---E-V--D 213 (946)
Q Consensus 147 plaGv~V~L~~~~-g~~-v~~ttTd~~G~f~f~~l-~pG~Y~l~~~~-~g~~~~~--~-~~~~v~v~~~~~---~-v--~ 213 (946)
..+||.++|++.+ |.. ....+||++|.+.|.+| +||+|+|.+.. .||.+.. . ....|++..... . + .
T Consensus 178 ~g~~A~F~L~~~~~~~~v~~~~ttd~~G~~~~~~L~~~G~Y~v~Et~a~GY~l~~~~~~~~~~vtI~~~~~~~~~~~~~~ 257 (444)
T 2x9x_A 178 AGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLDPT 257 (444)
T ss_dssp CCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEEECCCCCCCBCCC
T ss_pred cCCceEEEEEECCCCcEEEEEEEeCCCceEEEcCCCCCCcEEEEEEecCceEecccccCCcEEEEEeccccccccccccc
Confidence 3456999999875 433 34788999999999999 99999999854 6887652 1 123455543211 0 0 0
Q ss_pred eeeeccceEEe-EEEeeCCCceeceEEEEEECC--CCcccCCCC------------------------------------
Q 002258 214 DIFFAPGYEIR-GLVVAQGNPILGVHIYLYSDD--VGKVDCPQG------------------------------------ 254 (946)
Q Consensus 214 ~~l~v~g~~v~-G~V~~~G~Pi~Ga~V~L~~~~--~~~~~c~~g------------------------------------ 254 (946)
..-.+.| .+. =+|..+|++|+||.|.|++.+ +..+.....
T Consensus 258 ~~~v~~g-~v~~~KvD~~~~~L~GA~F~l~~~~~~g~~v~~~~~~~~~~~~~~L~~g~y~~~EAp~gY~~~t~e~~~~~~ 336 (444)
T 2x9x_A 258 EPKVVTY-GKKFVKVNDKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQE 336 (444)
T ss_dssp CCEEECE-EEEEEEECTTCCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTSCCC------
T ss_pred cceEEee-eEEEEEECCCCCCcCCcEEEEEecCCCCcEEeeecccccccccccccccceeeeecccccccccccccccce
Confidence 0001111 111 123345899999999999876 433210000
Q ss_pred --------------------C---CCccCccceeeEEEecCCceEEECCcCCeeEEEEEEEcCCceEEEecCceEEEEEe
Q 002258 255 --------------------S---GNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVR 311 (946)
Q Consensus 255 --------------------~---~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~~vtV~ 311 (946)
. .+... ...+...+||++|.|.|.+|++|+|+|++.....++. +....+.|+|.
T Consensus 337 ~~kid~~~~~l~gA~~~~~~~~~~~~~~~-~~~~~~~~td~~G~~~~~~L~~G~Y~l~EtkAP~GY~--l~~~~~~f~i~ 413 (444)
T 2x9x_A 337 KEKVDKAQAAYNAAVIAANNAFEWVADKD-NENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYA--LLTSRQKFEVT 413 (444)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSEEEESCTT-CTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSC--CCCSCEEEEEC
T ss_pred eeeecccccccccceeecccceeeccccc-cCceeEEEECCCCeEEECCCCCceEEEEEeeCCCCcc--cCCCcEEEEEe
Confidence 0 00000 0113468999999999999999999999987666544 33445778887
Q ss_pred ccce
Q 002258 312 HQHV 315 (946)
Q Consensus 312 ~~~~ 315 (946)
.++.
T Consensus 414 ~~~~ 417 (444)
T 2x9x_A 414 ATSY 417 (444)
T ss_dssp TTTT
T ss_pred CCcc
Confidence 6543
No 7
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=98.64 E-value=2.7e-07 Score=106.24 Aligned_cols=154 Identities=10% Similarity=0.134 Sum_probs=100.5
Q ss_pred cccceEEEEEeCC-CCEEE-EEEeCCCcEEEcCCC-CCccEEEEEEcCCCcccCC----ceeEEEEcCCCcCCCceeeEE
Q 002258 50 DYSHVTVELRTLD-GLVKE-STQCAPNGYYFIPVY-DKGSFVIKVNGPEGWSWNP----DKVAVTVDDTGCNGNEDINFR 122 (946)
Q Consensus 50 ~~sgv~V~L~~~~-G~~~~-~t~t~~nG~y~ip~l-~~G~Y~l~v~~P~G~~~~p----~~v~v~vd~~~~s~~~dinf~ 122 (946)
..++++|+|++.+ |..+. ...|+.+|.+.+..| .+|+|.|+...+.||..+. ....|.|....-.....++..
T Consensus 178 ~g~~A~F~L~~~~~~~~v~~~~ttd~~G~~~~~~L~~~G~Y~v~Et~a~GY~l~~~~~~~~~~vtI~~~~~~~~~~~~~~ 257 (444)
T 2x9x_A 178 AGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLDPT 257 (444)
T ss_dssp CCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEEECCCCCCCBCCC
T ss_pred cCCceEEEEEECCCCcEEEEEEEeCCCceEEEcCCCCCCcEEEEEEecCceEecccccCCcEEEEEeccccccccccccc
Confidence 3456999999976 54444 446677999999999 9999999654459998653 344555543110000001000
Q ss_pred EeCcEEEeEE-EeccCCccccCCCCCCcceEEEEEeCC--CcEEE-----------------------------------
Q 002258 123 FTGFTLLGRV-VGAIGGESCLDKGGGPSNVNVELLSHS--GDLIS----------------------------------- 164 (946)
Q Consensus 123 ~~g~~IsG~V-~~~~g~~s~~~~g~plaGv~V~L~~~~--g~~v~----------------------------------- 164 (946)
..-.+.|.| +.+.+ . .+.+|+||.++|++.+ |..+.
T Consensus 258 -~~~v~~g~v~~~KvD----~-~~~~L~GA~F~l~~~~~~g~~v~~~~~~~~~~~~~~L~~g~y~~~EAp~gY~~~t~e~ 331 (444)
T 2x9x_A 258 -EPKVVTYGKKFVKVN----D-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQ 331 (444)
T ss_dssp -CCEEECEEEEEEEEC----T-TCCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTSCCC-
T ss_pred -cceEEeeeEEEEEEC----C-CCCCcCCcEEEEEecCCCCcEEeeecccccccccccccccceeeeecccccccccccc
Confidence 001123333 21111 1 2589999999999887 65543
Q ss_pred ---------------------------------------EEEeCCCceEEEccccCceEEEEEec--CCceEEeeccEEE
Q 002258 165 ---------------------------------------SVITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEV 203 (946)
Q Consensus 165 ---------------------------------------~ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~~~~~~~v 203 (946)
..+||++|.|.|.+|++|+|.|.+.. .||.+. ...+.|
T Consensus 332 ~~~~~~~kid~~~~~l~gA~~~~~~~~~~~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~~~~f 410 (444)
T 2x9x_A 332 QTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALL-TSRQKF 410 (444)
T ss_dssp -----CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCC-CSCEEE
T ss_pred cccceeeeecccccccccceeecccceeeccccccCceeEEEECCCCeEEECCCCCceEEEEEeeCCCCcccC-CCcEEE
Confidence 46899999999999999999999864 488865 334788
Q ss_pred EEccCCe
Q 002258 204 ELGFENG 210 (946)
Q Consensus 204 ~v~~~~~ 210 (946)
+|..+..
T Consensus 411 ~i~~~~~ 417 (444)
T 2x9x_A 411 EVTATSY 417 (444)
T ss_dssp EECTTTT
T ss_pred EEeCCcc
Confidence 8876544
No 8
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=98.61 E-value=5.7e-06 Score=96.61 Aligned_cols=299 Identities=13% Similarity=0.128 Sum_probs=164.5
Q ss_pred ccccceEEEEEeCCCCEE--EEEEeCCCcEEEcC--CCCCccEEEEEEcCCCcccCCceeEEEEcCCCcCCCceeeEEE-
Q 002258 49 LDYSHVTVELRTLDGLVK--ESTQCAPNGYYFIP--VYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRF- 123 (946)
Q Consensus 49 i~~sgv~V~L~~~~G~~~--~~t~t~~nG~y~ip--~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~~~~s~~~dinf~~- 123 (946)
-+++|.+|.+....|.+. .+..|+++|.+.+. ...+|.|.|.++.. |- ..++.+.+-.+... .....+..
T Consensus 40 npv~g~~Vtf~~~~g~~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~-g~---s~s~~v~f~a~~~~-a~~s~l~~~ 114 (492)
T 1cwv_A 40 KPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVE-GQ---RQSVDTHFVKGTIA-ADKSTLAAV 114 (492)
T ss_dssp CBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEET-TE---EEEEEEEEECCCBC-GGGCEEEEE
T ss_pred CCCCCCEEEEEECCCccccccceeeCCCceEEEEEEcCcceEEEEEEEEC-Cc---cceeEEEEeeccCc-ccceeEEEe
Confidence 356799999876667653 35578999999954 35799999988864 32 22344444432111 01112221
Q ss_pred ------eC---cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEc--cccCceEEEEEecCC
Q 002258 124 ------TG---FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPN 192 (946)
Q Consensus 124 ------~g---~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g 192 (946)
.| ..++-+|+++ .|.|++|+.|.+....|. +...+||++|.+++. ...+|.|+|.+...+
T Consensus 115 ~~~~~A~g~~~~tltatv~Da--------~GNpv~g~~Vtf~~~~g~-~~~~Ttd~~G~at~tlts~~aG~~tVtA~v~g 185 (492)
T 1cwv_A 115 PTSIIADGLMASTITLELKDT--------YGDPQAGANVAFDTTLGN-MGVITDHNDGTYSAPLTSTTLGVATVTVKVDG 185 (492)
T ss_dssp SSEEETTSSCCEEEEEECBBT--------TSCBCCSCCEEEEESSSE-ECCCEECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred ccceecCCceeEEEEEEEEcC--------CCCCcCCcEEEEEECCCc-eeeeEecCCcEEEEEEEccCceEEEEEEEECC
Confidence 12 3455555554 379999999999876664 345677999998875 347899999999887
Q ss_pred ceEEeeccEEEEEccCC--------eeeee-eeeccc---eEEeEEEee-CCCceeceE-EEEEECCCCcccCCCCCCCc
Q 002258 193 LSVEVRGSTEVELGFEN--------GEVDD-IFFAPG---YEIRGLVVA-QGNPILGVH-IYLYSDDVGKVDCPQGSGNA 258 (946)
Q Consensus 193 ~~~~~~~~~~v~v~~~~--------~~v~~-~l~v~g---~~v~G~V~~-~G~Pi~Ga~-V~L~~~~~~~~~c~~g~~~~ 258 (946)
.... ..+..|++..+. +.+.. .+...| ..+.-+|++ .|+||+|.. |.+... +..
T Consensus 186 ~~~~-~~s~~vtf~a~~~~~~~~~~l~v~~~~~~A~g~~~~tltatv~D~~GNpv~g~~~V~f~~~-G~~---------- 253 (492)
T 1cwv_A 186 AAFS-VPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQN-GVP---------- 253 (492)
T ss_dssp EEEE-EEEEEEEEECCSSCCTTTCEEEESCSEEETTSCCCEEEEEECBCTTSCBCCSCCSEEEEEE-ESC----------
T ss_pred cccc-ccceEEEEEccCccccceeeEeecccceeeCCcceEEEEEEEECCCCCCccCCceEEEecC-Cce----------
Confidence 6543 122445444332 11111 122222 356667775 599999987 776533 111
Q ss_pred cCccceeeEEEecCCceEEECC--cCCeeEEEEEEEcCCce-----EEEecC--ceEEEEEeccceeeeceeEEEeeE-E
Q 002258 259 LGERKALCHAVSDADGKFMFKS--VPCGQYELVPHYKGENT-----VFDVSP--SLVSMSVRHQHVTVPEKFQVTGFS-V 328 (946)
Q Consensus 259 ~~~g~~~~~~~TD~~G~f~f~~--Lp~G~Y~v~~~~~~~~~-----~~~~~P--~~~~vtV~~~~~~l~~~f~~~g~s-V 328 (946)
......||.+|.|...- -.+|.++|.+...+... .+.+.+ ....+.+.+......+.|.-++|. .
T Consensus 254 -----v~~s~~T~~~G~~t~t~t~~~aG~~tVtA~~~g~~~~~~~~~i~f~~~~~~~~i~vng~~~~~~~gfP~tgf~~A 328 (492)
T 1cwv_A 254 -----VSISPITEQPDSYTATVVGNSVGDVTITPQVDTLILSTLQKKISLFPVPTLTGILVNGQNFATDKGFPKTIFKNA 328 (492)
T ss_dssp -----CEECCCEECSSCEEEEEECSSCEEEEEEEEETTEECGGGCEEEEEECCCCEEEEEETTEEECTTSCCCSEEETTC
T ss_pred -----eeeeeEecCCceEEEEEEcCcceEEEEEEEECCcccccccceEEEEeecccceEEeccccccccCCCCceeEEeE
Confidence 11234589999987642 24789999997654321 011111 001111111000000012111211 1
Q ss_pred EeEEEcCCCCeeeceEEEE--ccEEeeEeCCCceEEEcccCCceEEEEEEecc
Q 002258 329 GGRVVDENDMGVEGVKILV--DGHERSITDRDGYYKLDQVTSNRYTIEAVKVH 379 (946)
Q Consensus 329 ~G~V~d~~G~pl~ga~V~l--~G~~~~~TD~~G~f~~~~L~pG~Y~I~a~~~~ 379 (946)
.-++.. ++.++.+..+.+ +-...+++|++|.-+|.....+..+|++...+
T Consensus 329 ~f~~~~-~~~~~~n~~y~wsss~~~~~tvd~~G~vt~~~~~~~~vtITat~~~ 380 (492)
T 1cwv_A 329 TFQLQM-DNDVANNTQYEWSSSFTPNVSVNDQGQVTITYQTYSEVAVTAKSKK 380 (492)
T ss_dssp EEEEEE-TTCGGGGGGEEEEESSTTTEEECTTCEEEECSCCSSCEEEEEEESS
T ss_pred EEEEec-CCccccCCceeecccCcceEEECCCceEEEEecCCCEEEEEEEeCC
Confidence 112221 344444433333 21122588999999997655566888887654
No 9
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=98.41 E-value=1.7e-06 Score=103.18 Aligned_cols=152 Identities=9% Similarity=0.141 Sum_probs=97.9
Q ss_pred cccc--eEEEEEeCC-CCEEEEEE-eCCCcEEEcCCC-CCccEEE-EEEcCCCcccCC----ceeEEEEcCCCcCCCcee
Q 002258 50 DYSH--VTVELRTLD-GLVKESTQ-CAPNGYYFIPVY-DKGSFVI-KVNGPEGWSWNP----DKVAVTVDDTGCNGNEDI 119 (946)
Q Consensus 50 ~~sg--v~V~L~~~~-G~~~~~t~-t~~nG~y~ip~l-~~G~Y~l-~v~~P~G~~~~p----~~v~v~vd~~~~s~~~di 119 (946)
.|+| |+|+|++.+ |..+..+. ++.+|.+.+..| .+|+|+| +.++ .||..+. ....++|....-.....+
T Consensus 331 ~L~G~~A~F~l~~~~~~~~~~~~~~~~~~~~~~f~~L~~~g~Y~~~Et~a-~GY~l~~~~~~~~~~vti~n~~~~~p~~~ 409 (605)
T 2y1v_A 331 IPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSI-KGYSADYQEITTAGEIAVKNWKDENPKPL 409 (605)
T ss_dssp CCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCB-TTBEEEECCCCSTTEEEEEEEECCCCCCB
T ss_pred ccCCceEEEEEEECCCCeEEEeeeccCCceEEEEecCCCCccEEEEEeec-CceeccccccccceEEEEeeccccCcccc
Confidence 5788 999999987 55544433 344888888877 9999999 5667 9997653 334454433100000011
Q ss_pred eEEEeCcEEEeEE-EeccCCccccCCCCCCcceEEEEEeCC--CcEEE--------------------------------
Q 002258 120 NFRFTGFTLLGRV-VGAIGGESCLDKGGGPSNVNVELLSHS--GDLIS-------------------------------- 164 (946)
Q Consensus 120 nf~~~g~~IsG~V-~~~~g~~s~~~~g~plaGv~V~L~~~~--g~~v~-------------------------------- 164 (946)
+.. ..-.++|.+ +.+.+ . .+.+|+||.++|++.+ |..+.
T Consensus 410 ~~~-~~~v~tg~v~~~KvD----~-~~~~L~GA~F~l~~~~~~g~~~~~k~~~~t~~~g~~l~~g~y~~~ea~~gY~~~~ 483 (605)
T 2y1v_A 410 DPT-EPKVVTYGKKFVKVN----D-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALT 483 (605)
T ss_dssp CCC-CCEEECEEEEEEEEC----T-TCCBCCCCEEEEESSSSSSCEEECCGGGSCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ccC-cceEEeeeEEEEEEC----C-CCCCcCCCEEEEEecCCCCcEEEecccccccccccccccccceeccccccccccc
Confidence 100 011123333 11111 1 2489999999999877 65542
Q ss_pred ------------------------------------------EEEeCCCceEEEccccCceEEEEEec--CCceEEeecc
Q 002258 165 ------------------------------------------SVITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGS 200 (946)
Q Consensus 165 ------------------------------------------~ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~~~~~ 200 (946)
..+||++|.|.|.+|++|+|.|.+.. .||.+. ...
T Consensus 484 ~~~~~~~~~~kvd~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~~ 562 (605)
T 2y1v_A 484 AQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALL-TSR 562 (605)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHHCSSCEEESCTTSTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSCCC-SSC
T ss_pred cccccceeeeeeccccccccchhhccccceEEecccccccceeEeeCCCCEEEECCCCCceEEEEEeeCCCCcccC-CCc
Confidence 46899999999999999999999864 488866 334
Q ss_pred EEEEEccCC
Q 002258 201 TEVELGFEN 209 (946)
Q Consensus 201 ~~v~v~~~~ 209 (946)
+.|+|..+.
T Consensus 563 ~~f~i~~~~ 571 (605)
T 2y1v_A 563 QKFEVTATS 571 (605)
T ss_dssp EEEEECTTT
T ss_pred EEEEEcCCc
Confidence 778877554
No 10
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=98.40 E-value=2.9e-06 Score=97.10 Aligned_cols=303 Identities=14% Similarity=0.172 Sum_probs=134.2
Q ss_pred ccccceEEEEE----eCCCCEEEEEEeCCCcEEE--cCCCCCccEEEEEEcCCCcccCCceeEEEEcCCCcCCCceeeEE
Q 002258 49 LDYSHVTVELR----TLDGLVKESTQCAPNGYYF--IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFR 122 (946)
Q Consensus 49 i~~sgv~V~L~----~~~G~~~~~t~t~~nG~y~--ip~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~~~~s~~~dinf~ 122 (946)
-+++|..|.+- ..+|..+....+..+|.|. +-.-.+|.|.|.+..- |......+..+.+..+.-+. ....+.
T Consensus 20 npv~g~~V~~~~~~~~~~~~tl~~~~~~~~G~~t~tlTst~aG~~~VtA~~~-~~~~~~~~~~v~f~a~~~~a-~~s~l~ 97 (414)
T 3tkv_A 20 NPVTGEASRLRLVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVVRAFSE-QYQLGTLQQTLKFVAGPLDA-AHSSIT 97 (414)
T ss_dssp -----------------------------------------------------------------CCCCCCCG-GGCEEE
T ss_pred CCCCCceeEEEEeecCCCCceEcccEEcCCcEEEEEEEccCcceEEEEEEEc-CccccccceEEEEEcCCCcc-ceEEEE
Confidence 34557776663 2234444444455699999 3334789999976642 11111111222222211000 000111
Q ss_pred E--e----C--cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCc-----EEEEEEeCCCceEEEc---cccCceEEE
Q 002258 123 F--T----G--FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGD-----LISSVITSSEGSYLFK---NIIPGKYKL 186 (946)
Q Consensus 123 ~--~----g--~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~-----~v~~ttTd~~G~f~f~---~l~pG~Y~l 186 (946)
. . + -.+.=+|.++ .|.|++|..|......|. .....+++.+|.|.+. +-.+|.|.|
T Consensus 98 ~~~~~~~A~g~~t~t~~v~Da--------~gnpv~g~~V~~~~~~g~~~~~~t~~~~t~~~~G~~tatlT~~t~aG~~~V 169 (414)
T 3tkv_A 98 LNPDKPVVGGTVTAIWTAKDA--------NDNPVTGLNPDAPSLSGAAAAGSTASGWTDNGDGTWTAQISLGTTAGELDV 169 (414)
T ss_dssp EESSSCBTTSEEEEEEECBCT--------TCCBCCSCCCCCCEEESGGGTTCEECCCEECSSSEEEEEEECCSCCEEEEE
T ss_pred ECCCceecCCEEEEEEEEECC--------CCCCcCCCEEEEEecCCCcccceeccceEECCCcEEEEEEEeccccccEEE
Confidence 1 0 0 0111134444 378999987766543332 3445677899998765 455899999
Q ss_pred EEecCCceEEeeccEEEEEccCCee-------eeeeeeccce--EEeEEEee-CCCceeceEEEEEECCCCcccCCCCCC
Q 002258 187 RASHPNLSVEVRGSTEVELGFENGE-------VDDIFFAPGY--EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSG 256 (946)
Q Consensus 187 ~~~~~g~~~~~~~~~~v~v~~~~~~-------v~~~l~v~g~--~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~ 256 (946)
.+.-.+-... .....+++..+... +...-...|- .+.-+|++ .|+|++|..|.+......
T Consensus 170 ta~v~g~~~~-~~~~~vtf~a~~~sa~~s~l~~~~~~~~Ag~~~t~t~~v~Da~GNpv~g~~V~f~~~~~~--------- 239 (414)
T 3tkv_A 170 MPKLNGQDAA-ANAAKVTVVADALSSNQSKVSVAEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTA--------- 239 (414)
T ss_dssp ECEETTEECS-SSCEEEEEBCCSBCTTTCEEEESCSEEETTCEEEEEEECBBTTCCBCCSCCEEEEEESGG---------
T ss_pred EEEECCeecc-ccceeEEEEcCCCcceeeEEEEcccceecCCEEEEEEEEEcCCCCCcCCCEEEEEEccCC---------
Confidence 9987664432 11234554443321 1111112222 33444554 599999988876544210
Q ss_pred CccCccceeeEEEecCCceEEEC---CcCCeeEEEEEEEcCCce-----EEEecCc-----eEEEEEeccceeeeceeEE
Q 002258 257 NALGERKALCHAVSDADGKFMFK---SVPCGQYELVPHYKGENT-----VFDVSPS-----LVSMSVRHQHVTVPEKFQV 323 (946)
Q Consensus 257 ~~~~~g~~~~~~~TD~~G~f~f~---~Lp~G~Y~v~~~~~~~~~-----~~~~~P~-----~~~vtV~~~~~~l~~~f~~ 323 (946)
..+..+...+++.+|.|+.. +..+|.|.|.+...+... .+.+.|. ...+.+......- .
T Consensus 240 ---~~~~t~s~~tt~~~G~~~~t~ta~t~aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~~~~~a-~---- 311 (414)
T 3tkv_A 240 ---SEGATVSSWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKTPTV-K---- 311 (414)
T ss_dssp ---GTTCEECCCEEEETTEEEEEEECCSCCEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEESCSSCBT-T----
T ss_pred ---CCCceecceEECCCcEEEEEEEcCcccceEEEEEEECCEeccccceEEEEecCCccccceEEEeCCceeec-C----
Confidence 00112334578899999877 567899999997655321 1111111 1112221111100 0
Q ss_pred EeeEEEeEEEcCCCCeeeceEEEE---ccE----------EeeEeCCCceEEEc---ccCCceEEEEEEecc
Q 002258 324 TGFSVGGRVVDENDMGVEGVKILV---DGH----------ERSITDRDGYYKLD---QVTSNRYTIEAVKVH 379 (946)
Q Consensus 324 ~g~sV~G~V~d~~G~pl~ga~V~l---~G~----------~~~~TD~~G~f~~~---~L~pG~Y~I~a~~~~ 379 (946)
....+.-+|+|..|+||+|..|.+ +|. ...+||.+|.|... +-..|.|+|.+...+
T Consensus 312 ~~~~vt~tv~D~~GNpv~g~~V~f~~~~g~~~~~~~~~t~~~~tt~~~G~~~~tlta~t~aG~~~vta~v~g 383 (414)
T 3tkv_A 312 TTTELTFTMKDAYGNPVTGLKPDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQLSVMPRVNG 383 (414)
T ss_dssp CEEEEEEECBBTTSCBCCSCCCCCCEEESGGGCSSSCCEECCCEEEETTEEEEEEECCSCCEEEEEECEETT
T ss_pred CeEEEEEEEEeCCCCCCCCcEEEEEecccceeeccCCCccceeEECCCCEEEEEEEccceeeEEEEEEEECC
Confidence 013566688899999999999876 231 12489999999873 346799999998876
No 11
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=98.37 E-value=3.2e-07 Score=104.56 Aligned_cols=76 Identities=21% Similarity=0.304 Sum_probs=69.2
Q ss_pred EeecceeeeccccccccccCCCCccccceEEEEEeCCCCEEEEEEeCCCcEEEcCCCCCccEEEEEEcCCCcccCCce
Q 002258 26 HGCGGFVEASSSLIKSRKATDARLDYSHVTVELRTLDGLVKESTQCAPNGYYFIPVYDKGSFVIKVNGPEGWSWNPDK 103 (946)
Q Consensus 26 ~gcggfv~~~~~~~~~~~~~d~~i~~sgv~V~L~~~~G~~~~~t~t~~nG~y~ip~l~~G~Y~l~v~~P~G~~~~p~~ 103 (946)
.+.|||||.+ .++|.++.+.+.+++||+|+|++++|.++.+++|+++|+|.|..|.||.|+|++.+|.||.+.+..
T Consensus 306 ~~igg~Vw~D--~n~nG~~D~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~t~~~ 381 (429)
T 3irp_X 306 GGFGGYVWFD--KNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPTQAN 381 (429)
T ss_dssp EEEEEEEEEC--TTSSSSSCCSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEECCSS
T ss_pred EEEccEEEEe--CCCCCCcCcCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEEcCCC
Confidence 6679999977 467888888999999999999999999999999999999999999999999999999999987653
No 12
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=98.37 E-value=3.4e-06 Score=96.51 Aligned_cols=307 Identities=13% Similarity=0.132 Sum_probs=122.3
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEE----eCCCcEEEEEEeCCCceEEEc--cccCceEEEEEecCCceEEeeccE
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELL----SHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGST 201 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~----~~~g~~v~~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~~~~~~~ 201 (946)
+.-+|.+. .|.|++|..|.+. ..++..+...+++.+|.|.+. .-.+|.|.|.+.-.+.... ....
T Consensus 10 lta~v~D~--------~Gnpv~g~~V~~~~~~~~~~~~tl~~~~~~~~G~~t~tlTst~aG~~~VtA~~~~~~~~-~~~~ 80 (414)
T 3tkv_A 10 LTLTAVDS--------EGNPVTGEASRLRLVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVVRAFSEQYQLG-TLQQ 80 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEECC--------CCCCCCCceeEEEEeecCCCCceEcccEEcCCcEEEEEEEccCcceEEEEEEEcCcccc-ccce
Confidence 44456665 3689999888873 233444566677889999865 4468999999876554211 0011
Q ss_pred EEEEccCCe-----e--eeeeeeccce--EEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEec
Q 002258 202 EVELGFENG-----E--VDDIFFAPGY--EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSD 271 (946)
Q Consensus 202 ~v~v~~~~~-----~--v~~~l~v~g~--~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD 271 (946)
.+.+..+.. . +.+.-.+.+. .+.-+|++ .|+||+|..|.+....+..+ .+......+++
T Consensus 81 ~v~f~a~~~~a~~s~l~~~~~~~~A~g~~t~t~~v~Da~gnpv~g~~V~~~~~~g~~~-----------~~~t~~~~t~~ 149 (414)
T 3tkv_A 81 TLKFVAGPLDAAHSSITLNPDKPVVGGTVTAIWTAKDANDNPVTGLNPDAPSLSGAAA-----------AGSTASGWTDN 149 (414)
T ss_dssp ---CCCCCCCGGGCEEEEESSSCBTTSEEEEEEECBCTTCCBCCSCCCCCCEEESGGG-----------TTCEECCCEEC
T ss_pred EEEEEcCCCccceEEEEECCCceecCCEEEEEEEEECCCCCCcCCCEEEEEecCCCcc-----------cceeccceEEC
Confidence 222222211 0 1111111111 12224544 59999998776544322100 00012345678
Q ss_pred CCceEEE--C-CcCCeeEEEEEEEcCCce-----EEEecCce-----EEEEEeccceeeeceeEEEeeEEEeEEEcCCCC
Q 002258 272 ADGKFMF--K-SVPCGQYELVPHYKGENT-----VFDVSPSL-----VSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDM 338 (946)
Q Consensus 272 ~~G~f~f--~-~Lp~G~Y~v~~~~~~~~~-----~~~~~P~~-----~~vtV~~~~~~l~~~f~~~g~sV~G~V~d~~G~ 338 (946)
.+|.|.+ . +-.+|.|.|.+...+... ...+.+.. ..+.+..+...-. ....+.-+|.|.+|+
T Consensus 150 ~~G~~tatlT~~t~aG~~~Vta~v~g~~~~~~~~~vtf~a~~~sa~~s~l~~~~~~~~Ag-----~~~t~t~~v~Da~GN 224 (414)
T 3tkv_A 150 GDGTWTAQISLGTTAGELDVMPKLNGQDAAANAAKVTVVADALSSNQSKVSVAEDHVKAG-----ESTTVTLVAKDAHGN 224 (414)
T ss_dssp SSSEEEEEEECCSCCEEEEEECEETTEECSSSCEEEEEBCCSBCTTTCEEEESCSEEETT-----CEEEEEEECBBTTCC
T ss_pred CCcEEEEEEEeccccccEEEEEEECCeeccccceeEEEEcCCCcceeeEEEEcccceecC-----CEEEEEEEEEcCCCC
Confidence 9999865 4 566999999997654321 11111110 1122221111100 113566778899999
Q ss_pred eeeceEEEE--cc-----EEe--eEeCCCceEEEc---ccCCceEEEEEEeccceecc-eeeEEEccCcceeceEEEe--
Q 002258 339 GVEGVKILV--DG-----HER--SITDRDGYYKLD---QVTSNRYTIEAVKVHYKFNK-LKEYMVLPNMASIADIKAI-- 403 (946)
Q Consensus 339 pl~ga~V~l--~G-----~~~--~~TD~~G~f~~~---~L~pG~Y~I~a~~~~y~~~~-~~~v~v~p~~~~i~dI~~~-- 403 (946)
|++|..|.+ ++ -.+ .+++.+|.|+.. ...+|.|+|.+...+-.... ...+.+.|.......+.+.
T Consensus 225 pv~g~~V~f~~~~~~~~~~t~s~~tt~~~G~~~~t~ta~t~aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~ 304 (414)
T 3tkv_A 225 AISGLSLSASLTGTASEGATVSSWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVAD 304 (414)
T ss_dssp BCCSCCEEEEEESGGGTTCEECCCEEEETTEEEEEEECCSCCEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEES
T ss_pred CcCCCEEEEEEccCCCCCceecceEECCCcEEEEEEEcCcccceEEEEEEECCEeccccceEEEEecCCccccceEEEeC
Confidence 999998877 32 222 378899999886 45789999999887744321 1145666543322222211
Q ss_pred --------eeEEEEEEEEcCCc--ccEEEEEE--eCCCc-----ccceeeeeCCceEEEEEEc----CeeEEEEEEe
Q 002258 404 --------SYDICGVVRTVGSG--NKVKVALT--HGPDK-----VKPQVKQTDNNGNFCFEVP----PGEYRLSAMA 459 (946)
Q Consensus 404 --------~~~v~G~V~~~~~~--~~a~VtL~--~~~~~-----~~~~~~~Td~~G~F~f~l~----pG~Y~v~~~~ 459 (946)
...+.-+|++..+. .+..|.+. .+... .......+|.+|.|...|. +|.|+|.+..
T Consensus 305 ~~~~~a~~~~~vt~tv~D~~GNpv~g~~V~f~~~~g~~~~~~~~~t~~~~tt~~~G~~~~tlta~t~aG~~~vta~v 381 (414)
T 3tkv_A 305 NKTPTVKTTTELTFTMKDAYGNPVTGLKPDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQLSVMPRV 381 (414)
T ss_dssp CSSCBTTCEEEEEEECBBTTSCBCCSCCCCCCEEESGGGCSSSCCEECCCEEEETTEEEEEEECCSCCEEEEEECEE
T ss_pred CceeecCCeEEEEEEEEeCCCCCCCCcEEEEEecccceeeccCCCccceeEECCCCEEEEEEEccceeeEEEEEEEE
Confidence 11344444444432 23333332 11100 0013456788888888844 5888887776
No 13
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=98.34 E-value=5.6e-06 Score=98.77 Aligned_cols=165 Identities=14% Similarity=0.157 Sum_probs=101.5
Q ss_pred CCcc--eEEEEEeCCC-cEEE-EEEeCCCceEEEccc-cCceEEEEEec-CCceEEe--e-ccEEEEEccCCeeeeeeee
Q 002258 147 GPSN--VNVELLSHSG-DLIS-SVITSSEGSYLFKNI-IPGKYKLRASH-PNLSVEV--R-GSTEVELGFENGEVDDIFF 217 (946)
Q Consensus 147 plaG--v~V~L~~~~g-~~v~-~ttTd~~G~f~f~~l-~pG~Y~l~~~~-~g~~~~~--~-~~~~v~v~~~~~~v~~~l~ 217 (946)
+|+| |.++|++.++ ..+. .+.++.+|.+.|.+| +||.|+|.+.. .||.+.. . ....|+|..........+.
T Consensus 331 ~L~G~~A~F~l~~~~~~~~~~~~~~~~~~~~~~f~~L~~~g~Y~~~Et~a~GY~l~~~~~~~~~~vti~n~~~~~p~~~~ 410 (605)
T 2y1v_A 331 IPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLD 410 (605)
T ss_dssp CCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEEEEEECCCCCCBC
T ss_pred ccCCceEEEEEEECCCCeEEEeeeccCCceEEEEecCCCCccEEEEEeecCceeccccccccceEEEEeeccccCccccc
Confidence 7899 9999998764 4333 466788899999999 99999999843 7887662 0 1134444422110000000
Q ss_pred c-cceEEeEE-----EeeCCCceeceEEEEEECC--CCcccCCCC-----------------------------------
Q 002258 218 A-PGYEIRGL-----VVAQGNPILGVHIYLYSDD--VGKVDCPQG----------------------------------- 254 (946)
Q Consensus 218 v-~g~~v~G~-----V~~~G~Pi~Ga~V~L~~~~--~~~~~c~~g----------------------------------- 254 (946)
. ..-.+.|. |..++++|+||.|.|++.+ +..+....+
T Consensus 411 ~~~~~v~tg~v~~~KvD~~~~~L~GA~F~l~~~~~~g~~~~~k~~~~t~~~g~~l~~g~y~~~ea~~gY~~~~~~~~~~~ 490 (605)
T 2y1v_A 411 PTEPKVVTYGKKFVKVNDKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQ 490 (605)
T ss_dssp CCCCEEECEEEEEEEECTTCCBCCCCEEEEESSSSSSCEEECCGGGSCHHHHHHHHHHHHHHHHHHHHHHTSCTTTCCHH
T ss_pred cCcceEEeeeEEEEEECCCCCCcCCCEEEEEecCCCCcEEEecccccccccccccccccceeccccccccccccccccce
Confidence 0 01112232 3345799999999999876 432210000
Q ss_pred ---------------------C---CCccCccceeeEEEecCCceEEECCcCCeeEEEEEEEcCCceEEEecCceEEEEE
Q 002258 255 ---------------------S---GNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSV 310 (946)
Q Consensus 255 ---------------------~---~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~~vtV 310 (946)
. .+.. +...+...+||++|.|.|.+|++|+|+|++.....++. +....+.|+|
T Consensus 491 ~~~kvd~~~~~~~~a~~~a~~~~~~~~~~-~~~~~~~~~t~~~G~~~~~~L~~G~Y~l~EtkAP~GY~--l~~~~~~f~i 567 (605)
T 2y1v_A 491 EKEKVDKAQAAYNAAVIAANNAFEWVADK-DNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYA--LLTSRQKFEV 567 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSCEEESCT-TSTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTSC--CCSSCEEEEE
T ss_pred eeeeeccccccccchhhccccceEEeccc-ccccceeEeeCCCCEEEECCCCCceEEEEEeeCCCCcc--cCCCcEEEEE
Confidence 0 0000 00112467999999999999999999999987666543 3344567777
Q ss_pred eccc
Q 002258 311 RHQH 314 (946)
Q Consensus 311 ~~~~ 314 (946)
..++
T Consensus 568 ~~~~ 571 (605)
T 2y1v_A 568 TATS 571 (605)
T ss_dssp CTTT
T ss_pred cCCc
Confidence 7654
No 14
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=98.25 E-value=6.9e-06 Score=94.42 Aligned_cols=163 Identities=14% Similarity=0.140 Sum_probs=98.7
Q ss_pred CCCcc--eEEEEEeCCCcE-EE----EEEeCCCceEEEcccc-CceEEEEEecCCceEEe--eccEEEEEccC----Cee
Q 002258 146 GGPSN--VNVELLSHSGDL-IS----SVITSSEGSYLFKNII-PGKYKLRASHPNLSVEV--RGSTEVELGFE----NGE 211 (946)
Q Consensus 146 ~plaG--v~V~L~~~~g~~-v~----~ttTd~~G~f~f~~l~-pG~Y~l~~~~~g~~~~~--~~~~~v~v~~~----~~~ 211 (946)
.+|+| |.++|++.++.. +. ..+++.+|.+.|.+|. ||.|+|.+...||.+.. .....+++... +..
T Consensus 177 ~~L~G~~A~F~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~Y~~~Et~~GY~~~~~~~~~g~iti~n~k~~~~p~ 256 (452)
T 2xtl_A 177 KADETVDAVFTLQVKDGDKWVNVDSAKATAATSFKHTFENLDNAKTYRVIERVSGYAPEYVSFVNGVVTIKNNKDSNEPT 256 (452)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEEEEEEESCEEEEECSCCTTSCEEEEEECSSSEEEEEEEETTEEEEEEEECTTSCC
T ss_pred ccCCCceEEEEEEECCCceEEEeccceeeecccceEEEccCCCCccEEEEEeeCCcccceeccccceEEEeccccccCcc
Confidence 38999 999999876532 22 2347899999999997 99999999889997551 00112333211 000
Q ss_pred -eeeeeeccceEEeEE-----EeeC-CCceeceEEEEEECCCCcccCCCCCC----------------Ccc---------
Q 002258 212 -VDDIFFAPGYEIRGL-----VVAQ-GNPILGVHIYLYSDDVGKVDCPQGSG----------------NAL--------- 259 (946)
Q Consensus 212 -v~~~l~v~g~~v~G~-----V~~~-G~Pi~Ga~V~L~~~~~~~~~c~~g~~----------------~~~--------- 259 (946)
+.+. ..-.+.|. |..+ +++|+||.|.|.. ++..+....... .+|
T Consensus 257 p~~p~---~~~v~tg~~~~~KvD~~~~~~L~GA~F~l~~-~g~~~~~~t~~~g~~~~~~l~~~~~~~~kAp~gY~~~~~~ 332 (452)
T 2xtl_A 257 PINPS---EPKVVTYGRKFVKTNKDGKERLAGATFLVKK-DGKYLARKSGVATDAEKAAVDSTKSALDAAVKAYNDLTKE 332 (452)
T ss_dssp CBCCC---CCEEECEEEEEEEECSSSSCBCSCCEEEEEE-TTEEEEEECCSCCHHHHHHHHHHHHHHHHHHHHHHTSCHH
T ss_pred ccCCC---cceEEEccEEEEEECCCCCcccCCCEEEEEE-CCEEEEEeeccccceeecccCcchhhhhhcchhhhccccc
Confidence 0000 00112232 2233 4799999999987 543211000000 000
Q ss_pred -------------------------------------CccceeeEEEecCCceEEECCcCCeeEEEEEEEcCCceEEEec
Q 002258 260 -------------------------------------GERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVS 302 (946)
Q Consensus 260 -------------------------------------~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~ 302 (946)
.........+||++|.|.|.+|++|.|+|.+.....++. +.
T Consensus 333 ~~~~~~G~~~~~k~d~~~~~~~~~l~~a~~~f~~~~~~~~~~~~~~ttd~~G~~~~~~L~~G~Y~l~EtkAP~GY~--l~ 410 (452)
T 2xtl_A 333 KQEGQDGKSALATVSEKQKAYNDAFVKANYSYEWVEDKNAKNVVKLISNDKGQFEITGLTEGQYSLEETQAPTGYA--KL 410 (452)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCTTCTTBCCEECCTTSEEEEEEECSEEEEEEEEECCTTBC--CC
T ss_pred cccccccceEEEEecccccccchhhhccccceEEeccCCCcceeEEEeCCCCeEEECCCCCceEEEEEeeCCCCcc--cC
Confidence 000123567999999999999999999999987666644 33
Q ss_pred CceEEEEEeccc
Q 002258 303 PSLVSMSVRHQH 314 (946)
Q Consensus 303 P~~~~vtV~~~~ 314 (946)
...+.|+|..++
T Consensus 411 ~~~~~f~i~~~~ 422 (452)
T 2xtl_A 411 SGDVSFNVNATS 422 (452)
T ss_dssp SSCEEEEECTTT
T ss_pred CCCEEEEEeCCc
Confidence 445778887654
No 15
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=98.15 E-value=1.2e-05 Score=92.52 Aligned_cols=153 Identities=12% Similarity=0.095 Sum_probs=92.7
Q ss_pred cccc--eEEEEEeCCCCEEEEE-----EeCCCcEEEcCCCC-CccEEEEEEcCCCcccCC---ceeEEEEcCCCc-CCCc
Q 002258 50 DYSH--VTVELRTLDGLVKEST-----QCAPNGYYFIPVYD-KGSFVIKVNGPEGWSWNP---DKVAVTVDDTGC-NGNE 117 (946)
Q Consensus 50 ~~sg--v~V~L~~~~G~~~~~t-----~t~~nG~y~ip~l~-~G~Y~l~v~~P~G~~~~p---~~v~v~vd~~~~-s~~~ 117 (946)
.|+| |+|+|++.++...... +++.+|.+.+..|+ +|+|+|+... .||..+- ....+.+....- ....
T Consensus 178 ~L~G~~A~F~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~Y~~~Et~-~GY~~~~~~~~~g~iti~n~k~~~~p~ 256 (452)
T 2xtl_A 178 ADETVDAVFTLQVKDGDKWVNVDSAKATAATSFKHTFENLDNAKTYRVIERV-SGYAPEYVSFVNGVVTIKNNKDSNEPT 256 (452)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEEEEEEESCEEEEECSCCTTSCEEEEEEC-SSSEEEEEEEETTEEEEEEEECTTSCC
T ss_pred cCCCceEEEEEEECCCceEEEeccceeeecccceEEEccCCCCccEEEEEee-CCcccceeccccceEEEeccccccCcc
Confidence 4677 9999999875543322 34569999998887 9999997766 8996430 001122221000 0000
Q ss_pred eeeEEEeCcEEEeEE-EeccCCccccCCCCCCcceEEEEEeCCCcEE---------------------------------
Q 002258 118 DINFRFTGFTLLGRV-VGAIGGESCLDKGGGPSNVNVELLSHSGDLI--------------------------------- 163 (946)
Q Consensus 118 dinf~~~g~~IsG~V-~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v--------------------------------- 163 (946)
.++- -..-.+.|.+ +...+ ..++.+|+||.+.|.+ +|..+
T Consensus 257 p~~p-~~~~v~tg~~~~~KvD----~~~~~~L~GA~F~l~~-~g~~~~~~t~~~g~~~~~~l~~~~~~~~kAp~gY~~~~ 330 (452)
T 2xtl_A 257 PINP-SEPKVVTYGRKFVKTN----KDGKERLAGATFLVKK-DGKYLARKSGVATDAEKAAVDSTKSALDAAVKAYNDLT 330 (452)
T ss_dssp CBCC-CCCEEECEEEEEEEEC----SSSSCBCSCCEEEEEE-TTEEEEEECCSCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ccCC-CcceEEEccEEEEEEC----CCCCcccCCCEEEEEE-CCEEEEEeeccccceeecccCcchhhhhhcchhhhccc
Confidence 0000 0001123333 11111 1124699999999977 55432
Q ss_pred ---------------------------------------------EEEEeCCCceEEEccccCceEEEEEec--CCceEE
Q 002258 164 ---------------------------------------------SSVITSSEGSYLFKNIIPGKYKLRASH--PNLSVE 196 (946)
Q Consensus 164 ---------------------------------------------~~ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~ 196 (946)
...+||++|.|.|.+|++|+|.|.+.. .||.+.
T Consensus 331 ~~~~~~~~G~~~~~k~d~~~~~~~~~l~~a~~~f~~~~~~~~~~~~~~ttd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~ 410 (452)
T 2xtl_A 331 KEKQEGQDGKSALATVSEKQKAYNDAFVKANYSYEWVEDKNAKNVVKLISNDKGQFEITGLTEGQYSLEETQAPTGYAKL 410 (452)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCTTCTTBCCEECCTTSEEEEEEECSEEEEEEEEECCTTBCCC
T ss_pred cccccccccceEEEEecccccccchhhhccccceEEeccCCCcceeEEEeCCCCeEEECCCCCceEEEEEeeCCCCcccC
Confidence 236799999999999999999999864 488865
Q ss_pred eeccEEEEEccCCe
Q 002258 197 VRGSTEVELGFENG 210 (946)
Q Consensus 197 ~~~~~~v~v~~~~~ 210 (946)
...+.|+|..+..
T Consensus 411 -~~~~~f~i~~~~~ 423 (452)
T 2xtl_A 411 -SGDVSFNVNATSY 423 (452)
T ss_dssp -SSCEEEEECTTTT
T ss_pred -CCCEEEEEeCCcc
Confidence 3347788875543
No 16
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=98.14 E-value=3.9e-06 Score=95.67 Aligned_cols=70 Identities=23% Similarity=0.298 Sum_probs=57.7
Q ss_pred cEEEeEEEec-cC-CccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecC-CceEE
Q 002258 126 FTLLGRVVGA-IG-GESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHP-NLSVE 196 (946)
Q Consensus 126 ~~IsG~V~~~-~g-~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~-g~~~~ 196 (946)
+.|.|+|... ++ |..+ ..+.|++||+|+|++.+|.++.+++||++|.|.|.+|+||.|+|++..| ||.+.
T Consensus 306 ~~igg~Vw~D~n~nG~~D-~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~t 378 (429)
T 3irp_X 306 GGFGGYVWFDKNNDGVQN-DSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPT 378 (429)
T ss_dssp EEEEEEEEECTTSSSSSC-CSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEEC
T ss_pred EEEccEEEEeCCCCCCcC-cCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEEc
Confidence 5789999543 21 1222 2467999999999999999999999999999999999999999999776 88765
No 17
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=97.93 E-value=0.0052 Score=68.80 Aligned_cols=282 Identities=17% Similarity=0.256 Sum_probs=152.2
Q ss_pred ccccceEEEEEeCCCCEEEEE-EeCC-CcEEEc---CCCCCc---cEEEEEEcCCCcccCCceeEEEEcCCCcCCCceee
Q 002258 49 LDYSHVTVELRTLDGLVKEST-QCAP-NGYYFI---PVYDKG---SFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDIN 120 (946)
Q Consensus 49 i~~sgv~V~L~~~~G~~~~~t-~t~~-nG~y~i---p~l~~G---~Y~l~v~~P~G~~~~p~~v~v~vd~~~~s~~~din 120 (946)
+-.+.++|+|+. +|..+..- .+++ +-.|.| |.|+.| .|.|+..+|+||.. .+++. +|.
T Consensus 20 ~rP~~i~v~L~~-~G~~~~~~~l~~~~~W~~~F~~Lpk~~~G~~i~YtV~E~~~~gY~~-------~~~G~------~It 85 (373)
T 1d2p_A 20 KRPEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTT-------DINGT------TIT 85 (373)
T ss_dssp CCCSEEEEEEEE-TTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEE-------EEETT------EEE
T ss_pred CCCceEEEEEEe-CCcEeeeEEECCCCCceEEEcCCccCCCCCEEEEEEEecCCCCcEE-------eecCc------EEE
Confidence 335689999985 67665443 3444 445665 444445 89998899999863 23331 222
Q ss_pred EEEe--CcEEEeE-EEeccCCccccCCCCCCcceEEEEEeCCCcEEEE---EEeCCCceEEEccccCc------eEEEEE
Q 002258 121 FRFT--GFTLLGR-VVGAIGGESCLDKGGGPSNVNVELLSHSGDLISS---VITSSEGSYLFKNIIPG------KYKLRA 188 (946)
Q Consensus 121 f~~~--g~~IsG~-V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~---ttTd~~G~f~f~~l~pG------~Y~l~~ 188 (946)
-... -..|+.+ +-.. ++. ..+..+..++|+|+. +|..+.. ...+.+..|.|.+||-. .|+|.+
T Consensus 86 N~~~p~~~~i~VtK~W~D-~~n---~dg~rP~~I~v~L~~-~G~~~g~~~~l~~~n~W~~tf~~Lp~~~~G~~i~YtV~E 160 (373)
T 1d2p_A 86 NKYTPGETSATVTKNWDD-NNN---QDGKRPTEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEE 160 (373)
T ss_dssp EEECTTEEEEEEEEEEES-TTT---TTSCCCSEEEEEEEE-TTEEEEEEEEEEGGGTTEEEEEEEESBSSSSBCCEEEEE
T ss_pred eccCCcceEEEEEEEECC-CCc---ccCCCCceEEEEEEE-CCEEcceEEEEecCCceEEEEccCCcccCCCEEEEEEEE
Confidence 2221 1234443 3332 211 124566889999997 4644332 33367789999999876 899998
Q ss_pred --ecCCceEEeeccEEEEEccCCeeeeeeeeccceEEeEE-EeeC-----CCceeceEEEEEECCCCcccCCCCCCCccC
Q 002258 189 --SHPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALG 260 (946)
Q Consensus 189 --~~~g~~~~~~~~~~v~v~~~~~~v~~~l~v~g~~v~G~-V~~~-----G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~ 260 (946)
..+||.....+.. .++..+.+.....-..|+|. +..+ |..-..++|.|+.... .+
T Consensus 161 v~~~~GY~~~~~~~~-----~~~~tITNt~~p~~~~i~v~K~W~d~~~~dg~rP~~I~V~L~~~G~-~~----------- 223 (373)
T 1d2p_A 161 LTKVKGYTTHVDNND-----MGNLITTNKYTPETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGE-KV----------- 223 (373)
T ss_dssp CSCCTTCEEEEECSC-----TTSEEEEEECCCCEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTE-EE-----------
T ss_pred eccCCCcEEEEcccc-----cccEEEEeccccccccccceEEEcCCCcccccCCceEEEEEecCCe-Ee-----------
Confidence 3468876532210 11112222111112345554 3332 4455789999998521 10
Q ss_pred ccceeeEEEecCCceEEECCcCC---e---eEEEEEEEcCCceEEEecCceEEEEEeccceeeeceeEEEeeEEEeEEE-
Q 002258 261 ERKALCHAVSDADGKFMFKSVPC---G---QYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVV- 333 (946)
Q Consensus 261 ~g~~~~~~~TD~~G~f~f~~Lp~---G---~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sV~G~V~- 333 (946)
.......+.+-.|.|.+||. | .|+|.+..- +++ ..++.+-. +-....+...+|+++-.
T Consensus 224 ---~~~~l~~~~~W~~~f~~Lp~y~~G~~i~YtV~E~~v-~gY---------~~~~~g~~--ItNt~~p~~~~v~v~K~W 288 (373)
T 1d2p_A 224 ---KTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHV-KDY---------TTDINGTT--ITNKYTPGETSATVTKNW 288 (373)
T ss_dssp ---EEEEECGGGTSEEEEEEEESEETTEECCEEEEECCC-TTE---------EEEEETTE--EEEEECTTEEEEEEEEEE
T ss_pred ---eeEEecCCCCcEEEEecCCccCCCcEEEEEEEEecC-CCc---------EEEEcCeE--EEcccccccceeEEEEEE
Confidence 01122233456999999984 4 488887321 111 12222211 11111111123444332
Q ss_pred -cC---CCCeeeceEEEE--ccEEee----Ee-CCCceEEEcccCC---c---eEEEEEE--eccce
Q 002258 334 -DE---NDMGVEGVKILV--DGHERS----IT-DRDGYYKLDQVTS---N---RYTIEAV--KVHYK 381 (946)
Q Consensus 334 -d~---~G~pl~ga~V~l--~G~~~~----~T-D~~G~f~~~~L~p---G---~Y~I~a~--~~~y~ 381 (946)
|. +|..-+.++|.| +|+... .+ +.+..|+|.+|+. | .|+|+.. .+||.
T Consensus 289 ~d~~~~~g~rP~si~V~L~~dG~~~~~~~~l~~~n~W~~tf~~L~~~~~G~~i~YtV~E~~~~~GY~ 355 (373)
T 1d2p_A 289 DDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYT 355 (373)
T ss_dssp ESGGGTTSCCCSEEEEEEEETTEEEEEEEEEETTTTTEEEEEEEESEETTEECCEEEEECSCCTTEE
T ss_pred CCCCcccCCCCceEEEEEEeCCcEeeeEEEecCCCceEEEEcCCCccCCCCEEEEEEEEecCCCCcE
Confidence 32 233335688877 887652 22 3455899999986 4 7999875 45664
No 18
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.78 E-value=5.8e-05 Score=85.44 Aligned_cols=67 Identities=21% Similarity=0.185 Sum_probs=55.6
Q ss_pred eEEEeEEEcC-CCCeeeceEEEEccEEe-eEeCCCceEEEcccCCceEEEEEEeccceecceeeEEEccCc
Q 002258 326 FSVGGRVVDE-NDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNM 394 (946)
Q Consensus 326 ~sV~G~V~d~-~G~pl~ga~V~l~G~~~-~~TD~~G~f~~~~L~pG~Y~I~a~~~~y~~~~~~~v~v~p~~ 394 (946)
..|+|+|+|+ +|+||+||+|.+.|... ++||.+|.|.+ .|+||+|+|++++.+|..... .+.+..+.
T Consensus 301 ~~i~G~V~D~~~g~pi~~A~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v~~~~ 369 (380)
T 1h8l_A 301 RGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVTK-TVEVDSKG 369 (380)
T ss_dssp CEEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEEE-EEEECSSC
T ss_pred ccceEEEEeCCCCCccCceEEEEecCcceeEECCCEEEEE-ecCCCcEEEEEEEcCccceEE-EEEEcCCC
Confidence 4799999997 89999999999976543 69999999998 699999999999999865543 45555443
No 19
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.76 E-value=3.6e-05 Score=88.52 Aligned_cols=66 Identities=20% Similarity=0.313 Sum_probs=54.6
Q ss_pred EEEeEEEcCCCCeeeceEEEEccE--EeeEeCCCceEEEcccCCceEEEEEEeccceecceeeEEEccC
Q 002258 327 SVGGRVVDENDMGVEGVKILVDGH--ERSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPN 393 (946)
Q Consensus 327 sV~G~V~d~~G~pl~ga~V~l~G~--~~~~TD~~G~f~~~~L~pG~Y~I~a~~~~y~~~~~~~v~v~p~ 393 (946)
.|+|+|+|.+|+||+||+|.+.|. ..++||.+|.|.+ .|+||+|+|++++.||.....+.+.+..+
T Consensus 338 gv~G~V~D~~G~pi~gA~V~v~g~~~~~~~Td~~G~y~~-~l~pG~Y~l~vs~~Gy~~~~~~~v~v~~~ 405 (435)
T 3mn8_A 338 GIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQTSAPQQVRVTND 405 (435)
T ss_dssp SEEEEEECSSSCBCTTCEEEETTCTTSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCCCCCEEEEECCC
T ss_pred eeEEEEECCCCCccCceEEEEecccccceEeCCCCeEEE-ecCCCcEEEEEEEcccccceEEEEEEecC
Confidence 599999999999999999999774 4468999999988 69999999999999983333335666654
No 20
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=97.73 E-value=4.7e-05 Score=71.60 Aligned_cols=60 Identities=18% Similarity=0.287 Sum_probs=51.3
Q ss_pred ccccceEEEEEeCCCCEEEEEEeCCCcEEEcCCCCCccEEE-EEEcCCCcccCCceeEEEEcCC
Q 002258 49 LDYSHVTVELRTLDGLVKESTQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDDT 111 (946)
Q Consensus 49 i~~sgv~V~L~~~~G~~~~~t~t~~nG~y~ip~l~~G~Y~l-~v~~P~G~~~~p~~v~v~vd~~ 111 (946)
-.|+||+|+|++.+|..+.+.. .||.+.+..|++|+|.| +..+|.||... +.+.++|+.+
T Consensus 40 ~~L~GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~i~ftV~~~ 100 (121)
T 2x5p_A 40 KELAGATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETAAPDGYEVA-TAITFTVNEQ 100 (121)
T ss_dssp CBCCCCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEECCTTCCCC-CCEEEEECTT
T ss_pred CCcCCCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEeCCCCcccC-CCEEEEEcCC
Confidence 4689999999999999877654 37999988889999999 78999999986 7788888653
No 21
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=97.69 E-value=0.021 Score=74.74 Aligned_cols=264 Identities=17% Similarity=0.190 Sum_probs=141.2
Q ss_pred EEcCC-CCCccEEEEEEcCCCcccCCceeEEEEcCCCcCCCceeeEEE-------eCcEEEeEEEeccCCccccCCCCCC
Q 002258 77 YFIPV-YDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRF-------TGFTLLGRVVGAIGGESCLDKGGGP 148 (946)
Q Consensus 77 y~ip~-l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~~~~s~~~dinf~~-------~g~~IsG~V~~~~g~~s~~~~g~pl 148 (946)
|.+|. +..|.|.|.+....|..|. .+..|.+... .. ..|.+ .|-+|.=++...+. +..|+
T Consensus 64 ~~vp~~~~~~~~~l~~~~~~~~~f~-~~~~v~~~~~----~~-~~fi~TDr~iYrPGqtV~~r~~~~~~------~~~p~ 131 (1325)
T 2pn5_A 64 FNMPEDLTAGNYKITIDGQRGFSFH-KEAELVYLSK----SI-SGLIQVDKPVFKPGDTVNFRVIVLDT------ELKPP 131 (1325)
T ss_dssp EECCSCCCSCCEEEEEEEESSCCCE-EEEEEEECSC----SE-EEEEEESCSEECTTCEEEEEEEEEET------TSSCC
T ss_pred EEcCCCcCCCcEEEEEEecCCccEE-EEEEEEEEcc----cc-cEEEecCCCccCCCCEEEEEEEEecC------Ccccc
Confidence 34553 3578999988875566664 3344555432 11 12322 23344444322211 13565
Q ss_pred cc---eEEEEEeCCCcEEEEE--EeCCCceEEEc-----cccCceEEEEEecCCce-----EEe----eccEEEEEccCC
Q 002258 149 SN---VNVELLSHSGDLISSV--ITSSEGSYLFK-----NIIPGKYKLRASHPNLS-----VEV----RGSTEVELGFEN 209 (946)
Q Consensus 149 aG---v~V~L~~~~g~~v~~t--tTd~~G~f~f~-----~l~pG~Y~l~~~~~g~~-----~~~----~~~~~v~v~~~~ 209 (946)
.. ++|+|.+++|..+.+. .++..|.|.++ ....|.|+|++...+-. +.+ .|..+|.+....
T Consensus 132 ~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~ 211 (1325)
T 2pn5_A 132 ARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSV 211 (1325)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEECCSCCCCEEEEEEESS
T ss_pred ccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeCCCcEEEEEEEEEeccCceEEEEEecCc
Confidence 53 7899999999776643 56788887663 34579999999764311 221 233444443221
Q ss_pred eeeeeeeeccceEEeEEEee---CCCceec-eEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEEC----Cc
Q 002258 210 GEVDDIFFAPGYEIRGLVVA---QGNPILG-VHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK----SV 281 (946)
Q Consensus 210 ~~v~~~l~v~g~~v~G~V~~---~G~Pi~G-a~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~----~L 281 (946)
.+...+-.+..+|.. .|.|++| +.|.+...+.. .....++|.+|.+.+. .+
T Consensus 212 -----~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~v~~~~~~----------------~~~~~~~d~~G~~~~~~~~~~~ 270 (1325)
T 2pn5_A 212 -----IPLEEHQAVNLTIEANYHFGKPVQGVAKVELYLDDDK----------------LKLKKELTVYGKGQVELRFDNF 270 (1325)
T ss_dssp -----CCBGGGCEEEEEEEEEESSSCBCEEEEEEEEEETTTT----------------EEEEEEEEEESEEEEEEECSSC
T ss_pred -----eEEecCCeEEEEEEEEEcCCCeeeeEEEEEEEECCCC----------------cceeEEEecCcEEEEEEehhHh
Confidence 122344455555553 4999999 88887765210 1135567888888773 22
Q ss_pred C--Ce--eEEEEEEEc--CCceE------EEecCceEEEEEeccceeeeceeEEEe--eEEEeEEEcCCCCeeeceE--E
Q 002258 282 P--CG--QYELVPHYK--GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGVEGVK--I 345 (946)
Q Consensus 282 p--~G--~Y~v~~~~~--~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G~pl~ga~--V 345 (946)
. +. .|.|.+... +.+.. +.+.|....+.+.... . +-..| +.+.-.+.+.+|+|+++.. |
T Consensus 271 ~~~~~~~~~~v~a~V~e~~tg~~~~~~~~i~i~~~~~~i~~~~~~----~-~~~~g~~~~~~v~~~~~dG~p~~~~~~~v 345 (1325)
T 2pn5_A 271 AMDADQQDVPVKVSFVEQYTNRTVVKQSQITVYRYAYRVELIKES----P-QFRPGLPFKCALQFTHHDGTPAKGISGKV 345 (1325)
T ss_dssp CCSSSEEEEEEEEEEEETTTCCEEEEEEEEEEESSSCEEEEEESS----S-SBCTTSCEEEEEEEECTTSCBCTTCEEEE
T ss_pred ccccccceEEEEEEEEECCCcEEEEeeEEEEEEEeeEEEEEEeCC----C-cccCCCCEEEEEEEECCCCCcCCCCceeE
Confidence 1 11 355555432 11111 1122333233322110 0 11112 3455567888999999875 5
Q ss_pred EE---ccEEeeEeCCCceEEEc-cc-CCceEE-EEEEec
Q 002258 346 LV---DGHERSITDRDGYYKLD-QV-TSNRYT-IEAVKV 378 (946)
Q Consensus 346 ~l---~G~~~~~TD~~G~f~~~-~L-~pG~Y~-I~a~~~ 378 (946)
.+ +.....+||++|...|. ++ ..|.|. |++...
T Consensus 346 ~~~~~~~~~~~~t~~~G~~~~~~~~~~~g~y~~l~v~~~ 384 (1325)
T 2pn5_A 346 EVSDVRFETTTTSDNDGLIKLELQPSEGTEQLSIHFNAV 384 (1325)
T ss_dssp EEGGGTEEEEEECCTTSEEEEEECCCTTCCEEEEEEECT
T ss_pred EEEEecceEEEEeCCCCcEEEEEECCCCCeEEEEEEEEc
Confidence 44 23334689999975553 22 357886 877643
No 22
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.62 E-value=0.00011 Score=84.87 Aligned_cols=63 Identities=22% Similarity=0.280 Sum_probs=53.8
Q ss_pred eEEEeEEEcCCCCeeeceEEEEccEEe-eEeCCCceEEEcccCCceEEEEEEeccceecceeeEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMV 390 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l~G~~~-~~TD~~G~f~~~~L~pG~Y~I~a~~~~y~~~~~~~v~v 390 (946)
..|+|+|+|.+|.||+||+|.+.|... ++||.+|.|.+ .|+||+|+|++++.+|..... .+.+
T Consensus 321 ~~i~G~V~D~~g~pi~gA~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v 384 (439)
T 2nsm_A 321 QGIKGMVLDQNYNNLANAVISVSGINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPETV-TVTV 384 (439)
T ss_dssp CSEEEEEECTTSCBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEEE-EEEE
T ss_pred cceEEEEEcCCCCCccceEEEEEcccceeEECCCCeEEE-ccCCeeEEEEEEecCceeEEE-EEEE
Confidence 469999999999999999999977544 68999999988 799999999999999866544 3555
No 23
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=97.41 E-value=0.0057 Score=73.92 Aligned_cols=210 Identities=17% Similarity=0.170 Sum_probs=114.0
Q ss_pred eEEEEEeCCCcEEEE--EEeC-CCceEEEc-----cccCceEEEEEecCC---ce----EEe----eccEEEEEccCCee
Q 002258 151 VNVELLSHSGDLISS--VITS-SEGSYLFK-----NIIPGKYKLRASHPN---LS----VEV----RGSTEVELGFENGE 211 (946)
Q Consensus 151 v~V~L~~~~g~~v~~--ttTd-~~G~f~f~-----~l~pG~Y~l~~~~~g---~~----~~~----~~~~~v~v~~~~~~ 211 (946)
++|+|.+++|..+.+ ..+| ..|.|.++ ..+.|.|+|++...+ .. +.+ .+..+|.+.....
T Consensus 141 v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~- 219 (645)
T 2hr0_A 141 VMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTEK- 219 (645)
T ss_dssp EEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEETTCTTSEEEEEEECCCSCCCCCEEEEEESSS-
T ss_pred EEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEECCCCCceEEEEEEEeeccCCeEEEEEEcCce-
Confidence 788899999976553 3454 78987663 346799999997532 11 221 2334444432221
Q ss_pred eeeeeeccc--eEEeEEEee---CCCceec-eEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECC-----
Q 002258 212 VDDIFFAPG--YEIRGLVVA---QGNPILG-VHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKS----- 280 (946)
Q Consensus 212 v~~~l~v~g--~~v~G~V~~---~G~Pi~G-a~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~----- 280 (946)
....+ -.+..+|.. .|.|++| |.|........... ..+ ........+|.+|.|.|.-
T Consensus 220 ----~~~~~~~~~~~v~v~a~Y~~G~Pv~G~a~v~~~~~~~~~~~------~~~--~~~~~~~~~dg~g~~~l~~~~~~~ 287 (645)
T 2hr0_A 220 ----FYYIYNEKGLEVTITARFLYGKKVEGTAFVIFGIQDGEQRI------SLP--ESLKRIPIEDGSGEVVLSRKVLLD 287 (645)
T ss_dssp ----SEETTCTTCEEEEEEEECTTSCBCCEEEEEEEEEEETTEEE------ECG--GGCEEEEEBTTEEEEEECHHHHHT
T ss_pred ----eEecCCCcEEEEEEEEEEcCCCeeeeEEEEEEEEeeCCeee------ecC--chheeEEeeCCeEEEEEeHHHhhh
Confidence 12223 344555553 4999999 76654322110000 000 0012456789999999751
Q ss_pred -c--C------CeeEEEEEEE-c--CCceE------EEecCceEEEEEeccceeeeceeEEEe--eEEEeEEEcCCCCee
Q 002258 281 -V--P------CGQYELVPHY-K--GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGV 340 (946)
Q Consensus 281 -L--p------~G~Y~v~~~~-~--~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G~pl 340 (946)
. + +..+.|.+.. + +.... +.+.+....+.+.... . +-..| +.+.-.+++.+|+|+
T Consensus 288 ~~~~~~~~~~~~~~~~v~a~V~e~~g~~~~~~~~~~i~i~~~~~~i~~~~~~----~-~~~~g~~~~~~v~~~~~dG~p~ 362 (645)
T 2hr0_A 288 GVQNLRAEDLVGKSLYVSATVILHSGSDMVQAERSGIPIVTSPYQIHFTKTP----K-YFKPGMPFDLMVFVTNPDGSPA 362 (645)
T ss_dssp SCSSCSGGGGTTCEEEEEEEEEESSSSCEEEEEEEEEEEESCSCEEECSSSC----S-BCCTTSEEEEEEEEECSSSSBC
T ss_pred hhcccccccccCcEEEEEEEEEECCCCeEEEeeeeeEEEEEeeEEEEEEeCc----c-ccCCCCcEEEEEEEEcCCCCcc
Confidence 1 1 2256666543 2 22111 1233333333332111 1 11122 344445678899999
Q ss_pred eceEEEE-cc-EEeeEeCCCce--EEEcccCC--ceEEEEEEecc
Q 002258 341 EGVKILV-DG-HERSITDRDGY--YKLDQVTS--NRYTIEAVKVH 379 (946)
Q Consensus 341 ~ga~V~l-~G-~~~~~TD~~G~--f~~~~L~p--G~Y~I~a~~~~ 379 (946)
+|+.|.+ .| ....+||++|. |.| +++. |.|.|++....
T Consensus 363 ~~~~v~l~~~~~~~~~t~~~G~~~~~i-~~~~~~g~y~l~v~~~~ 406 (645)
T 2hr0_A 363 YRVPVAVQGEDTVQSLTQGDGVAKLSI-NTHPSQKPLSITVRTKK 406 (645)
T ss_dssp SCCCEEESSSCCSCCCCCTTSEEEEEE-ECCSCSSCEEEEEEECC
T ss_pred CCEEEEEecCcceeeEECCCCcEEEEE-ECCCCCeEEEEEEEEcC
Confidence 9999998 44 33358899994 555 3443 88999987644
No 24
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.40 E-value=0.00021 Score=81.94 Aligned_cols=66 Identities=20% Similarity=0.237 Sum_probs=54.2
Q ss_pred eEEEeEEEcCCCCeeeceEEEEccEE-e--eEeCCCceEEEcccCCceEEEEEEeccceecceeeEEEccC
Q 002258 326 FSVGGRVVDENDMGVEGVKILVDGHE-R--SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPN 393 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l~G~~-~--~~TD~~G~f~~~~L~pG~Y~I~a~~~~y~~~~~~~v~v~p~ 393 (946)
..|+|+|.|.+|.||+||+|.+.|.. . ++||.+|.|.+ .|+||+|+|.++..+|..... .+.+..+
T Consensus 296 ~~I~G~V~D~~g~pi~gA~V~v~g~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v~~~ 364 (426)
T 1uwy_A 296 LGVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHDPHIT-KVIIPEK 364 (426)
T ss_dssp CSEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSCCEEE-EEEECSS
T ss_pred ceeEEEEECCCCCccCceEEEEEeccccceeEeCCCCEEEe-ccCCeeEEEEEEEcCcccEEE-EEEEeCC
Confidence 46999999999999999999996543 3 68999999998 699999999999999765443 3455443
No 25
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=97.23 E-value=0.0007 Score=63.60 Aligned_cols=59 Identities=24% Similarity=0.344 Sum_probs=49.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEec--CCceEEeeccEEEEEcc
Q 002258 145 GGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEVELGF 207 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~~~~~~~v~v~~ 207 (946)
+.+|+||.++|++.+|+.+.+.+| +|.+.|.+|+||+|+|.+.. .||.+. . ...|+|..
T Consensus 39 g~~L~GA~F~l~~~~g~~v~~~~s--dG~~~~~~L~~G~Y~l~EtkAP~GY~l~-~-~i~ftV~~ 99 (121)
T 2x5p_A 39 GKELAGATMELRDSSGKTISTWIS--DGQVKDFYLMPGKYTFVETAAPDGYEVA-T-AITFTVNE 99 (121)
T ss_dssp CCBCCCCEEEEECTTSCEEEEEEC--CSSCEEEEECSEEEEEEEEECCTTCCCC-C-CEEEEECT
T ss_pred CCCcCCCEEEEEECCCCEEEEEEe--CCEEEEcccCCcEEEEEEEeCCCCcccC-C-CEEEEEcC
Confidence 689999999999999988887776 59999999999999999854 488875 3 36777764
No 26
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.19 E-value=0.00083 Score=75.93 Aligned_cols=69 Identities=25% Similarity=0.327 Sum_probs=54.6
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCCceEEeeccEEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVEL 205 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~~~~~~~v~v 205 (946)
..|+|+|++.. +++|++||+|.+.+. -..++||.+|.|.+ .|+||+|+|.+++.||.... ..|.+
T Consensus 301 ~~i~G~V~D~~-------~g~pi~~A~V~v~~~----~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~---~~v~v 365 (380)
T 1h8l_A 301 RGIWGFVLDAT-------DGRGILNATISVADI----NHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVT---KTVEV 365 (380)
T ss_dssp CEEEEEEEETT-------TCSBCTTCEEEETTE----EEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEE---EEEEE
T ss_pred ccceEEEEeCC-------CCCccCceEEEEecC----cceeEECCCEEEEE-ecCCCcEEEEEEEcCccceE---EEEEE
Confidence 47999999852 379999999998532 25689999999998 59999999999999998551 35666
Q ss_pred ccCC
Q 002258 206 GFEN 209 (946)
Q Consensus 206 ~~~~ 209 (946)
..+.
T Consensus 366 ~~~~ 369 (380)
T 1h8l_A 366 DSKG 369 (380)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 5443
No 27
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=97.18 E-value=0.44 Score=53.20 Aligned_cols=272 Identities=16% Similarity=0.254 Sum_probs=142.4
Q ss_pred CCCCcceEEEEEeCCCcEEEEE--EeCCCceEEEccccC---c---eEEEEEec-CCceEEeeccEEEEEccCCeeeeee
Q 002258 145 GGGPSNVNVELLSHSGDLISSV--ITSSEGSYLFKNIIP---G---KYKLRASH-PNLSVEVRGSTEVELGFENGEVDDI 215 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~~v~~t--tTd~~G~f~f~~l~p---G---~Y~l~~~~-~g~~~~~~~~~~v~v~~~~~~v~~~ 215 (946)
|..++-++|.|+.. |..+.+. ..+.+-.|+|.+||- | .|+|.+.. +||...+.+. .| .+.
T Consensus 19 g~rP~~i~v~L~~~-G~~~~~~~l~~~~~W~~~F~~Lpk~~~G~~i~YtV~E~~~~gY~~~~~G~-~I---------tN~ 87 (373)
T 1d2p_A 19 GKRPEKVSVNLLAN-GEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDINGT-TI---------TNK 87 (373)
T ss_dssp CCCCSEEEEEEEET-TEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEEEEETT-EE---------EEE
T ss_pred CCCCceEEEEEEeC-CcEeeeEEECCCCCceEEEcCCccCCCCCEEEEEEEecCCCCcEEeecCc-EE---------Eec
Confidence 56678899999874 6544432 233456899999987 4 89999855 4776553332 11 111
Q ss_pred eeccceEEeEE-EeeC-----CCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCe-----
Q 002258 216 FFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCG----- 284 (946)
Q Consensus 216 l~v~g~~v~G~-V~~~-----G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G----- 284 (946)
......+|.+. +..+ |..-..++|.|+... ... +. ......+.+-.|.|.+||..
T Consensus 88 ~~p~~~~i~VtK~W~D~~n~dg~rP~~I~v~L~~~G-~~~------------g~-~~~l~~~n~W~~tf~~Lp~~~~G~~ 153 (373)
T 1d2p_A 88 YTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDG-KAT------------GK-TAILNESNNWTHTWTGLDEKAKGQQ 153 (373)
T ss_dssp ECTTEEEEEEEEEEESTTTTTSCCCSEEEEEEEETT-EEE------------EE-EEEEEGGGTTEEEEEEEESBSSSSB
T ss_pred cCCcceEEEEEEEECCCCcccCCCCceEEEEEEECC-EEc------------ce-EEEEecCCceEEEEccCCcccCCCE
Confidence 11122344443 3343 323357999999852 110 00 12233456889999999976
Q ss_pred -eEEEEEEEcCCceEEEecCceEEEEEecc---ceeeeceeEEEeeEEEeEEE--cC---CCCeeeceEEEE--ccEEee
Q 002258 285 -QYELVPHYKGENTVFDVSPSLVSMSVRHQ---HVTVPEKFQVTGFSVGGRVV--DE---NDMGVEGVKILV--DGHERS 353 (946)
Q Consensus 285 -~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~---~~~l~~~f~~~g~sV~G~V~--d~---~G~pl~ga~V~l--~G~~~~ 353 (946)
.|+|.+.....++. .++... ...+-....+.-.+|.|.-. |. +|..-..++|.| +|+.+.
T Consensus 154 i~YtV~Ev~~~~GY~---------~~~~~~~~~~~tITNt~~p~~~~i~v~K~W~d~~~~dg~rP~~I~V~L~~~G~~~~ 224 (373)
T 1d2p_A 154 VKYTVEELTKVKGYT---------THVDNNDMGNLITTNKYTPETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEKVK 224 (373)
T ss_dssp CCEEEEECSCCTTCE---------EEEECSCTTSEEEEEECCCCEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTEEEE
T ss_pred EEEEEEEeccCCCcE---------EEEcccccccEEEEeccccccccccceEEEcCCCcccccCCceEEEEEecCCeEee
Confidence 79998831222221 111111 11111111111235555443 32 255566788887 887652
Q ss_pred ---EeC-CCceEEEcccCC---c---eEEEEEE-eccceecceeeEEEccCcceeceE-EEeeeEEEEEEEEcC-----C
Q 002258 354 ---ITD-RDGYYKLDQVTS---N---RYTIEAV-KVHYKFNKLKEYMVLPNMASIADI-KAISYDICGVVRTVG-----S 416 (946)
Q Consensus 354 ---~TD-~~G~f~~~~L~p---G---~Y~I~a~-~~~y~~~~~~~v~v~p~~~~i~dI-~~~~~~v~G~V~~~~-----~ 416 (946)
.+. .+-.|+|.+||- | .|+|+.. .++|...-. ++ .|.+- .+...+|+++-.-.+ +
T Consensus 225 ~~~l~~~~~W~~~f~~Lp~y~~G~~i~YtV~E~~v~gY~~~~~-g~-------~ItNt~~p~~~~v~v~K~W~d~~~~~g 296 (373)
T 1d2p_A 225 TLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDIN-GT-------TITNKYTPGETSATVTKNWDDNNNQDG 296 (373)
T ss_dssp EEEECGGGTSEEEEEEEESEETTEECCEEEEECCCTTEEEEEE-TT-------EEEEEECTTEEEEEEEEEEESGGGTTS
T ss_pred eEEecCCCCcEEEEecCCccCCCcEEEEEEEEecCCCcEEEEc-Ce-------EEEcccccccceeEEEEEECCCCcccC
Confidence 333 345899999974 4 4888754 345532210 11 12111 011234555444332 1
Q ss_pred c--ccEEEEEEeCCCccc--ceeeeeCCceEEEEE-EcCe------eEEEEEEe
Q 002258 417 G--NKVKVALTHGPDKVK--PQVKQTDNNGNFCFE-VPPG------EYRLSAMA 459 (946)
Q Consensus 417 ~--~~a~VtL~~~~~~~~--~~~~~Td~~G~F~f~-l~pG------~Y~v~~~~ 459 (946)
. ....|.|.. ++... ......+.+-.|.|. |+.. .|+|++..
T Consensus 297 ~rP~si~V~L~~-dG~~~~~~~~l~~~n~W~~tf~~L~~~~~G~~i~YtV~E~~ 349 (373)
T 1d2p_A 297 KRPTEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELT 349 (373)
T ss_dssp CCCSEEEEEEEE-TTEEEEEEEEEETTTTTEEEEEEEESEETTEECCEEEEECS
T ss_pred CCCceEEEEEEe-CCcEeeeEEEecCCCceEEEEcCCCccCCCCEEEEEEEEec
Confidence 2 235666753 22221 111223455689999 8864 89999863
No 28
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.13 E-value=0.00096 Score=76.87 Aligned_cols=64 Identities=20% Similarity=0.344 Sum_probs=52.2
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCCceEEeeccEEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVEL 205 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~~~~~~~v~v 205 (946)
..|+|+|++. +++|++||+|.+.+. -..++||.+|.|.+ .|+||+|+|.+++.||.... ..|.+
T Consensus 321 ~~i~G~V~D~--------~g~pi~gA~V~v~~~----~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~---~~v~v 384 (439)
T 2nsm_A 321 QGIKGMVLDQ--------NYNNLANAVISVSGI----NHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPET---VTVTV 384 (439)
T ss_dssp CSEEEEEECT--------TSCBCTTCEEEETTE----EEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEE---EEEEE
T ss_pred cceEEEEEcC--------CCCCccceEEEEEcc----cceeEECCCCeEEE-ccCCeeEEEEEEecCceeEE---EEEEE
Confidence 5699999985 379999999998532 35689999999987 59999999999999998652 35666
No 29
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.07 E-value=0.00069 Score=77.89 Aligned_cols=70 Identities=24% Similarity=0.304 Sum_probs=53.0
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCCceEEeeccEEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVEL 205 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~~~~~~~v~v 205 (946)
..|+|+|++. +|+|++||+|.+..... ..++||.+|.|.+. |+||+|+|.+++.||.... ...|+|
T Consensus 337 ~gv~G~V~D~--------~G~pi~gA~V~v~g~~~---~~~~Td~~G~y~~~-l~pG~Y~l~vs~~Gy~~~~--~~~v~v 402 (435)
T 3mn8_A 337 IGIKGLVTDA--------SGFPIADANVYVAGLEE---KPMRTSKRGEYWRL-LTPGLYSVHASAFGYQTSA--PQQVRV 402 (435)
T ss_dssp SSEEEEEECS--------SSCBCTTCEEEETTCTT---SCEECCTTCEEEEC-CCSEEEEEEEEBTTBCCCC--CEEEEE
T ss_pred ceeEEEEECC--------CCCccCceEEEEecccc---cceEeCCCCeEEEe-cCCCcEEEEEEEcccccce--EEEEEE
Confidence 3599999986 37999999999953211 35789999999876 9999999999999993221 245666
Q ss_pred ccCC
Q 002258 206 GFEN 209 (946)
Q Consensus 206 ~~~~ 209 (946)
..+.
T Consensus 403 ~~~~ 406 (435)
T 3mn8_A 403 TNDN 406 (435)
T ss_dssp CCCS
T ss_pred ecCC
Confidence 6543
No 30
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=96.98 E-value=0.00076 Score=77.35 Aligned_cols=69 Identities=23% Similarity=0.367 Sum_probs=53.6
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCCceEEeeccEEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVEL 205 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~~~~~~~v~v 205 (946)
..|+|+|.+. +|+|++||+|.+...+.. ..++||.+|.|.+. |+||+|+|.+++.||.... ..|.+
T Consensus 296 ~~I~G~V~D~--------~g~pi~gA~V~v~g~~~~--~~~~Td~~G~y~~~-l~~G~Y~l~vs~~Gy~~~~---~~v~v 361 (426)
T 1uwy_A 296 LGVKGQVFDQ--------NGNPLPNVIVEVQDRKHI--CPYRTNKYGEYYLL-LLPGSYIINVTVPGHDPHI---TKVII 361 (426)
T ss_dssp CSEEEEEECT--------TSCBCCSCEEEETTCCCS--SCCBCCTTCEEEEC-CCSEEEEEEEECSSSCCEE---EEEEE
T ss_pred ceeEEEEECC--------CCCccCceEEEEEecccc--ceeEeCCCCEEEec-cCCeeEEEEEEEcCcccEE---EEEEE
Confidence 4699999985 379999999998643311 24789999999985 9999999999999997541 34666
Q ss_pred ccC
Q 002258 206 GFE 208 (946)
Q Consensus 206 ~~~ 208 (946)
..+
T Consensus 362 ~~~ 364 (426)
T 1uwy_A 362 PEK 364 (426)
T ss_dssp CSS
T ss_pred eCC
Confidence 544
No 31
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=96.61 E-value=0.0023 Score=68.92 Aligned_cols=83 Identities=24% Similarity=0.455 Sum_probs=60.1
Q ss_pred EEEeccceeeeceeEEEeeEEEeEEEcC-------CCCeeeceEEEEccEEe-eEeCCCceEEEcccCCce--EEEEEEe
Q 002258 308 MSVRHQHVTVPEKFQVTGFSVGGRVVDE-------NDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNR--YTIEAVK 377 (946)
Q Consensus 308 vtV~~~~~~l~~~f~~~g~sV~G~V~d~-------~G~pl~ga~V~l~G~~~-~~TD~~G~f~~~~L~pG~--Y~I~a~~ 377 (946)
..+..+.+++.......+++|+|.|... ....-+|++|.+.|... ++||++|+|++.++|+|+ |+|..++
T Consensus 140 ~~~~nG~V~V~~~~~~~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~ 219 (321)
T 3kcp_A 140 TDLINGGVLVTNKPVIEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISR 219 (321)
T ss_dssp CEEECEEEEECCCCCCSSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTSSCEEECCTTSEEEEEEECCEEEEEEEEEEC
T ss_pred eEEECCEEEECCCCCCCCceEEEEEccccccccccchhccCCcEEEEEeccceeEECCCceEEEeccCCCCccEEEEEee
Confidence 3333444444333334478999999753 23456899999977654 799999999999999998 9999999
Q ss_pred ccceecceeeEEE
Q 002258 378 VHYKFNKLKEYMV 390 (946)
Q Consensus 378 ~~y~~~~~~~v~v 390 (946)
++|.......+.+
T Consensus 220 ~g~l~~~i~~~~v 232 (321)
T 3kcp_A 220 ATYLDRVIANVVV 232 (321)
T ss_dssp TEECCEEEEEEEE
T ss_pred cCceeeeeeeeEE
Confidence 9987665544443
No 32
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=96.60 E-value=0.0025 Score=79.23 Aligned_cols=66 Identities=14% Similarity=0.220 Sum_probs=56.4
Q ss_pred CCCccccceEEEEEeCCC-CEEEEEEeCCCcEEEcCCCCCccEEE-EEEcCCCcccCCceeEEEEcCC
Q 002258 46 DARLDYSHVTVELRTLDG-LVKESTQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDDT 111 (946)
Q Consensus 46 d~~i~~sgv~V~L~~~~G-~~~~~t~t~~nG~y~ip~l~~G~Y~l-~v~~P~G~~~~p~~v~v~vd~~ 111 (946)
+..-.|+||+|+|++.++ ..+.+.+|+.+|...+..|.||+|+| +..+|.||....+.+.++|+.+
T Consensus 57 ~~~~~L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~~~~~~v~v~~~ 124 (893)
T 2ww8_A 57 EGGALLGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKN 124 (893)
T ss_dssp STTCBCCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEECTT
T ss_pred CCCCccCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecCCccEEEEECCC
Confidence 344579999999999874 55666778899999999999999999 7899999999998888888764
No 33
>3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A
Probab=96.52 E-value=0.0037 Score=68.68 Aligned_cols=64 Identities=19% Similarity=0.354 Sum_probs=53.0
Q ss_pred CccccceEEEEEeCCCCEEE-------------------------EEEeCCCcEEEcCCCC-------Cc---cEEE-EE
Q 002258 48 RLDYSHVTVELRTLDGLVKE-------------------------STQCAPNGYYFIPVYD-------KG---SFVI-KV 91 (946)
Q Consensus 48 ~i~~sgv~V~L~~~~G~~~~-------------------------~t~t~~nG~y~ip~l~-------~G---~Y~l-~v 91 (946)
...|+||+|+|++.+|..+. .-+|+.+|.+.|..|. +| +|.| +.
T Consensus 194 ~~~L~GA~F~L~~~~g~~~~~~~~~~k~~~~~~~~~~~~~~g~~~~~tt~~~G~~~~~gL~~~~~~~~~G~~~~Y~l~Et 273 (319)
T 3pf2_A 194 TQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTAVTYKLKET 273 (319)
T ss_dssp CSBCCCCEEEEEETTSCBCBCCHHHHHHCCCGGGBSSCCCTTSBCEEECCTTSEEEEEEECCSTTSCTTCCCEEEEEEEE
T ss_pred CcccCCCEEEEEeCCCCEEeeeeeccccccccceeccccccCceeEEEECCCCEEEEccccccccccCCCCcceEEEEEe
Confidence 56799999999998876431 2356779999998887 47 9998 89
Q ss_pred EcCCCcccCCceeEEEEcCC
Q 002258 92 NGPEGWSWNPDKVAVTVDDT 111 (946)
Q Consensus 92 ~~P~G~~~~p~~v~v~vd~~ 111 (946)
.+|.||.+.+++++++|..+
T Consensus 274 kAP~GY~l~~~~~~f~v~~~ 293 (319)
T 3pf2_A 274 KAPEGYVIPDKEIEFTVSQT 293 (319)
T ss_dssp ECCTTBCCCSSCEEEEECTT
T ss_pred eCCCCcccCCCcEEEEEecC
Confidence 99999999999999998775
No 34
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=96.25 E-value=0.0037 Score=65.93 Aligned_cols=48 Identities=25% Similarity=0.430 Sum_probs=41.8
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccEE--------------eeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~~--------------~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|+|.-+.||.|.+
T Consensus 103 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 103 LIFRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp EEEEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 4689999999999999999998 3422 3589999999999999999976
No 35
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=96.20 E-value=1.8 Score=56.59 Aligned_cols=165 Identities=16% Similarity=0.169 Sum_probs=89.4
Q ss_pred cCceEEEEEec-CCceEEeeccEEEEEccCCee----eeeeeeccceEEeEEE--ee-CCCceec---eEEEEEECCCCc
Q 002258 180 IPGKYKLRASH-PNLSVEVRGSTEVELGFENGE----VDDIFFAPGYEIRGLV--VA-QGNPILG---VHIYLYSDDVGK 248 (946)
Q Consensus 180 ~pG~Y~l~~~~-~g~~~~~~~~~~v~v~~~~~~----v~~~l~v~g~~v~G~V--~~-~G~Pi~G---a~V~L~~~~~~~ 248 (946)
.+|.|.|.+.. .+..+. .+..|.+...... .+..+..+|-.|.-++ ++ +.+|+.. +.|.|.+.++..
T Consensus 71 ~~~~~~l~~~~~~~~~f~--~~~~v~~~~~~~~~fi~TDr~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~ 148 (1325)
T 2pn5_A 71 TAGNYKITIDGQRGFSFH--KEAELVYLSKSISGLIQVDKPVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNV 148 (1325)
T ss_dssp CSCCEEEEEEEESSCCCE--EEEEEEECSCSEEEEEEESCSEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCE
T ss_pred CCCcEEEEEEecCCccEE--EEEEEEEEcccccEEEecCCCccCCCCEEEEEEEEecCCccccccCccEEEEEECCCCCE
Confidence 35789887765 455443 1245555544432 2344556676665543 34 4677764 678888776543
Q ss_pred ccCCCCCCCccCccceeeEEEecCCceEEE-----CCcCCeeEEEEEEEcCCc---eEEE---ecCceEEEEEeccceee
Q 002258 249 VDCPQGSGNALGERKALCHAVSDADGKFMF-----KSVPCGQYELVPHYKGEN---TVFD---VSPSLVSMSVRHQHVTV 317 (946)
Q Consensus 249 ~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f-----~~Lp~G~Y~v~~~~~~~~---~~~~---~~P~~~~vtV~~~~~~l 317 (946)
+. .....++..|.|.. ...+.|.|+|++.+.+.. ..|. +.+...++++......+
T Consensus 149 i~--------------~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~~~ 214 (1325)
T 2pn5_A 149 IR--------------KWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVIPL 214 (1325)
T ss_dssp EE--------------EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEECCSCCCCEEEEEEESSCCB
T ss_pred EE--------------EEecccCCCCeEecceECCCCccccceEEEEEeCCCcEEEEEEEEEeccCceEEEEEecCceEE
Confidence 21 23345667776644 344679999999754321 1233 33334455554322111
Q ss_pred eceeEEEeeEEEeEEEcCCCCeeec-eEEEE--cc---EEeeEeCCCceEEE
Q 002258 318 PEKFQVTGFSVGGRVVDENDMGVEG-VKILV--DG---HERSITDRDGYYKL 363 (946)
Q Consensus 318 ~~~f~~~g~sV~G~V~d~~G~pl~g-a~V~l--~G---~~~~~TD~~G~f~~ 363 (946)
... ..+.+.....--.|+|++| |+|.+ ++ ....++|.+|.+.+
T Consensus 215 ~~~---~~~~v~v~a~Y~~G~Pv~G~~~v~v~~~~~~~~~~~~~d~~G~~~~ 263 (1325)
T 2pn5_A 215 EEH---QAVNLTIEANYHFGKPVQGVAKVELYLDDDKLKLKKELTVYGKGQV 263 (1325)
T ss_dssp GGG---CEEEEEEEEEESSSCBCEEEEEEEEEETTTTEEEEEEEEEESEEEE
T ss_pred ecC---CeEEEEEEEEEcCCCeeeeEEEEEEEECCCCcceeEEEecCcEEEE
Confidence 100 0122222333336999999 77776 22 12357888888776
No 36
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=96.20 E-value=0.45 Score=57.25 Aligned_cols=209 Identities=15% Similarity=0.192 Sum_probs=109.9
Q ss_pred ceEEEEEeCCCCEEEEEEe-C--CCcEEE----cCC-CCCccEEEEEEcCC--Ccc----c-----CCceeEEEEcCCCc
Q 002258 53 HVTVELRTLDGLVKESTQC-A--PNGYYF----IPV-YDKGSFVIKVNGPE--GWS----W-----NPDKVAVTVDDTGC 113 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t-~--~nG~y~----ip~-l~~G~Y~l~v~~P~--G~~----~-----~p~~v~v~vd~~~~ 113 (946)
-++|.|+|++|..+.+... . .+|.|. +|- ...|.|.|++..-. +.. | -+...+++++...
T Consensus 140 ~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~- 218 (645)
T 2hr0_A 140 TVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTE- 218 (645)
T ss_dssp EEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEETTCTTSEEEEEEECCCSCCCCCEEEEEESS-
T ss_pred eEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEECCCCCceEEEEEEEeeccCCeEEEEEEcCc-
Confidence 4789999999998876432 3 567654 433 25699999987532 111 1 1222233332210
Q ss_pred CCCceeeEEEeC--cEEEeEEEeccCCccccCCCCCCcc-eEEEEE--eCCC------cEEEEEEeCCCceEEEcc--c-
Q 002258 114 NGNEDINFRFTG--FTLLGRVVGAIGGESCLDKGGGPSN-VNVELL--SHSG------DLISSVITSSEGSYLFKN--I- 179 (946)
Q Consensus 114 s~~~dinf~~~g--~~IsG~V~~~~g~~s~~~~g~plaG-v~V~L~--~~~g------~~v~~ttTd~~G~f~f~~--l- 179 (946)
.+...+ -.+..+|.... --|+|++| +.|... ..+. .......+|.+|.|.|.- +
T Consensus 219 ------~~~~~~~~~~~~v~v~a~Y------~~G~Pv~G~a~v~~~~~~~~~~~~~~~~~~~~~~~dg~g~~~l~~~~~~ 286 (645)
T 2hr0_A 219 ------KFYYIYNEKGLEVTITARF------LYGKKVEGTAFVIFGIQDGEQRISLPESLKRIPIEDGSGEVVLSRKVLL 286 (645)
T ss_dssp ------SSEETTCTTCEEEEEEEEC------TTSCBCCEEEEEEEEEEETTEEEECGGGCEEEEEBTTEEEEEECHHHHH
T ss_pred ------eeEecCCCcEEEEEEEEEE------cCCCeeeeEEEEEEEEeeCCeeeecCchheeEEeeCCeEEEEEeHHHhh
Confidence 011223 33444443321 02689998 666542 2110 112466789999999851 0
Q ss_pred -----------cCceEEEEEec---CCceEEeeccEEEEEccCCeeee----eeeeccceEEeEEEe--e-CCCceeceE
Q 002258 180 -----------IPGKYKLRASH---PNLSVEVRGSTEVELGFENGEVD----DIFFAPGYEIRGLVV--A-QGNPILGVH 238 (946)
Q Consensus 180 -----------~pG~Y~l~~~~---~g~~~~~~~~~~v~v~~~~~~v~----~~l~v~g~~v~G~V~--~-~G~Pi~Ga~ 238 (946)
.+..|.|.++- .|-.........+.+......+. .....+|....+.|. + +|+|++|+.
T Consensus 287 ~~~~~~~~~~~~~~~~~v~a~V~e~~g~~~~~~~~~~i~i~~~~~~i~~~~~~~~~~~g~~~~~~v~~~~~dG~p~~~~~ 366 (645)
T 2hr0_A 287 DGVQNLRAEDLVGKSLYVSATVILHSGSDMVQAERSGIPIVTSPYQIHFTKTPKYFKPGMPFDLMVFVTNPDGSPAYRVP 366 (645)
T ss_dssp TSCSSCSGGGGTTCEEEEEEEEEESSSSCEEEEEEEEEEEESCSCEEECSSSCSBCCTTSEEEEEEEEECSSSSBCSCCC
T ss_pred hhhcccccccccCcEEEEEEEEEECCCCeEEEeeeeeEEEEEeeEEEEEEeCccccCCCCcEEEEEEEEcCCCCccCCEE
Confidence 12246555532 22211111123344433333221 123345555566554 3 699999998
Q ss_pred EEEEECCCCcccCCCCCCCccCccceeeEEEecCCc--eEEECCcCC--eeEEEEEEEcC
Q 002258 239 IYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADG--KFMFKSVPC--GQYELVPHYKG 294 (946)
Q Consensus 239 V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G--~f~f~~Lp~--G~Y~v~~~~~~ 294 (946)
|.|.... ....+||++| .|.|. ++. |.|.|.+.+..
T Consensus 367 v~l~~~~-------------------~~~~~t~~~G~~~~~i~-~~~~~g~y~l~v~~~~ 406 (645)
T 2hr0_A 367 VAVQGED-------------------TVQSLTQGDGVAKLSIN-THPSQKPLSITVRTKK 406 (645)
T ss_dssp EEESSSC-------------------CSCCCCCTTSEEEEEEE-CCSCSSCEEEEEEECC
T ss_pred EEEecCc-------------------ceeeEECCCCcEEEEEE-CCCCCeEEEEEEEEcC
Confidence 8875320 1235788899 55553 443 88999987544
No 37
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=96.14 E-value=0.0078 Score=74.85 Aligned_cols=65 Identities=22% Similarity=0.303 Sum_probs=52.7
Q ss_pred CCCCCcceEEEEEeCCC-cEEEEEEeCCCceEEEccccCceEEEEEec--CCceEEeeccEEEEEccCC
Q 002258 144 KGGGPSNVNVELLSHSG-DLISSVITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEVELGFEN 209 (946)
Q Consensus 144 ~g~plaGv~V~L~~~~g-~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~~~~~~~v~v~~~~ 209 (946)
++.+|+||+++|.+.++ ..+.+.+||++|.+.|.+|+||+|+|.+.. .||... .....|+|..+.
T Consensus 58 ~~~~L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~-~~~~~v~v~~~g 125 (893)
T 2ww8_A 58 GGALLGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPS-TKQWTVEVEKNG 125 (893)
T ss_dssp TTCBCCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCC-CCEEEEEECTTC
T ss_pred CCCccCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecC-CccEEEEECCCc
Confidence 36899999999998875 557788999999999999999999999864 488766 334677776443
No 38
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=96.08 E-value=0.0088 Score=64.82 Aligned_cols=48 Identities=27% Similarity=0.359 Sum_probs=41.6
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccE--------------EeeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGH--------------ERSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~--------------~~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|.|.-|.||.|.+
T Consensus 137 l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~i 203 (312)
T 2xsu_A 137 LIIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGC 203 (312)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccC
Confidence 4689999999999999999998 332 13589999999999999999985
No 39
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=95.95 E-value=0.009 Score=64.80 Aligned_cols=48 Identities=27% Similarity=0.487 Sum_probs=41.7
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccEE--------------eeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~~--------------~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|+|.-+.||.|.+
T Consensus 133 l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~ 199 (311)
T 2azq_A 133 MFLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGC 199 (311)
T ss_dssp EEEEEEEECSSSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEEC
T ss_pred EEEEEEEEcCCCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCC
Confidence 4689999999999999999998 3432 2589999999999999999985
No 40
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=95.93 E-value=0.026 Score=65.44 Aligned_cols=71 Identities=20% Similarity=0.180 Sum_probs=51.4
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCCceEEeeccEEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVEL 205 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~~~~~~~v~v 205 (946)
-+|+|+|. | .+.+.+.|.+.+..+ .-..+.||++|.|+|.+|+||+|+|.+.++|+... ...|+|
T Consensus 258 GtVsG~V~---G--------~~~~~~avv~~~~k~-~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~---~~~VtV 322 (508)
T 1nkg_A 258 GKVAGTAS---G--------ADSSMDWVVHWYNDA-AQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVA---TSSVTV 322 (508)
T ss_dssp BEEEEEEE---S--------SCTTSCEEEEEECSS-CEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEE---EEEEEE
T ss_pred cEEEEEEc---C--------ccCCceEEEEEcCCC-ceeEEEECCCCcEEeCCcCCceEEEEEEECceEEE---EeEEEE
Confidence 37889876 2 333334444444444 34689999999999999999999999999998544 357788
Q ss_pred ccCCee
Q 002258 206 GFENGE 211 (946)
Q Consensus 206 ~~~~~~ 211 (946)
..+...
T Consensus 323 ~aG~t~ 328 (508)
T 1nkg_A 323 SAGSTT 328 (508)
T ss_dssp CTTCEE
T ss_pred cCCCee
Confidence 766653
No 41
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=95.88 E-value=0.0094 Score=62.42 Aligned_cols=48 Identities=29% Similarity=0.465 Sum_probs=41.6
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccE-------------------EeeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGH-------------------ERSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~-------------------~~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|+|.-|.||.|.+
T Consensus 79 i~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 150 (241)
T 2bum_B 79 VIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW 150 (241)
T ss_dssp EEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCcccc
Confidence 4689999999999999999998 332 12489999999999999999987
No 42
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=95.75 E-value=0.0081 Score=68.79 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=51.7
Q ss_pred CccccceEEEEEeCCCCE-------------EEEEEeCCCcEEEcCCC--------------------CCccEEE-EEEc
Q 002258 48 RLDYSHVTVELRTLDGLV-------------KESTQCAPNGYYFIPVY--------------------DKGSFVI-KVNG 93 (946)
Q Consensus 48 ~i~~sgv~V~L~~~~G~~-------------~~~t~t~~nG~y~ip~l--------------------~~G~Y~l-~v~~ 93 (946)
...|+||+|+|++.++.. ...-+|+.+|.+.|..| .+|+|.| +..+
T Consensus 320 ~~~L~GA~F~L~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~gL~~~~~~~~~~~~~~~~~~~~~~g~Y~lvETkA 399 (436)
T 3hr6_A 320 PGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETAT 399 (436)
T ss_dssp CCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEETTTTSCSEEEEEEEEC
T ss_pred CcccCCCEEEEEECCCCccccccCCceeeccceEEEeCCCcEEEEeCccccccccccccccccccccCCCCeEEEEEecC
Confidence 457999999999876531 12336778999998877 5799998 8999
Q ss_pred CCCcccCCceeEEEEcCC
Q 002258 94 PEGWSWNPDKVAVTVDDT 111 (946)
Q Consensus 94 P~G~~~~p~~v~v~vd~~ 111 (946)
|.||.+.++++.++|..+
T Consensus 400 P~GY~l~~~pi~fti~~~ 417 (436)
T 3hr6_A 400 ASGYELLPKPVIVKLEAN 417 (436)
T ss_dssp CTTCBCCSSCEEECCCCC
T ss_pred CCCcCcCCCcEEEEEecC
Confidence 999999999999888764
No 43
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=95.71 E-value=0.019 Score=62.23 Aligned_cols=54 Identities=22% Similarity=0.401 Sum_probs=44.1
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCC--C------------cEEEEEEeCCCceEEEccccCceEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G------------DLISSVITSSEGSYLFKNIIPGKYKLR 187 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g------------~~v~~ttTd~~G~f~f~~l~pG~Y~l~ 187 (946)
..|.|+|++. +|.|++||.|++...+ | ..-....||++|+|+|.-|.||.|.+-
T Consensus 137 l~v~G~V~D~--------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ip 204 (312)
T 2xsu_A 137 LIIEGTVTDT--------EGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGCP 204 (312)
T ss_dssp EEEEEEEEET--------TSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECC--------CCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccCC
Confidence 3578999985 3799999999998644 3 124578999999999999999999864
No 44
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=95.66 E-value=0.012 Score=62.22 Aligned_cols=48 Identities=27% Similarity=0.430 Sum_probs=41.2
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccEE--------------eeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~~--------------~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||-|-+
T Consensus 100 l~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 100 LIIRGTVRSDTGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCC
Confidence 4689999999999999999998 3321 2589999999999999999965
No 45
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=95.58 E-value=0.01 Score=64.36 Aligned_cols=48 Identities=21% Similarity=0.432 Sum_probs=41.4
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccEE----------------eeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGHE----------------RSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~~----------------~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|+|.-+.||.|.+
T Consensus 134 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 134 LILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 4689999999999999999998 3321 2589999999999999999976
No 46
>3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii}
Probab=95.55 E-value=0.0078 Score=65.23 Aligned_cols=63 Identities=10% Similarity=0.156 Sum_probs=48.0
Q ss_pred ccccceEEEEEeCCCC------------EE-----EEEEeCCCcEEEcCCC-----------------CCccEEE-EEEc
Q 002258 49 LDYSHVTVELRTLDGL------------VK-----ESTQCAPNGYYFIPVY-----------------DKGSFVI-KVNG 93 (946)
Q Consensus 49 i~~sgv~V~L~~~~G~------------~~-----~~t~t~~nG~y~ip~l-----------------~~G~Y~l-~v~~ 93 (946)
..|+||+|+|++.+|. .+ ..-+|+.+|.+.|..| ++|+|.| +.++
T Consensus 176 ~~L~GA~F~L~~~~~~~~~~~~~~~~g~~i~~~~~~~~tTd~~G~~~~~gL~~~d~~~~~~~~~~~~~~~~~Y~l~EtkA 255 (290)
T 3qdh_A 176 AGLQGAQFQLYKAKNAYAGTCTKDKEGDPIAINGETTLTTDAQGAINVKGLFISDSIDGANRDNQKDATARCYVLVETKA 255 (290)
T ss_dssp -CCTTCEEEEEEESSTTCSSCCSCEESSCCCBTTBSSEECCTTSEEEEEEEEEEESCCCTTSSCCTTCSEEEEEEEEEEC
T ss_pred cccCCCEEEEEECCCcccceeeccccCceEecCCceEEEECCCCEEEEeCcccccccccccccccccCCCceEEEEEccC
Confidence 5699999999987653 11 1336778999998877 6799999 7999
Q ss_pred CCCcccCCc---eeEEEEcCC
Q 002258 94 PEGWSWNPD---KVAVTVDDT 111 (946)
Q Consensus 94 P~G~~~~p~---~v~v~vd~~ 111 (946)
|.||.+... ..++.|..+
T Consensus 256 P~GY~l~~~~~~~~~~~v~~~ 276 (290)
T 3qdh_A 256 PAGYVLPAGDGAVTPVKIEVG 276 (290)
T ss_dssp CTTBCCCCGGGGEEEEEEEC-
T ss_pred CCCeEcCcCcCCceeEEEECC
Confidence 999999877 566666543
No 47
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=95.55 E-value=0.012 Score=63.37 Aligned_cols=49 Identities=31% Similarity=0.432 Sum_probs=42.3
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccE-------------EeeEeCCCceEEEcccCCceEEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGH-------------ERSITDRDGYYKLDQVTSNRYTIE 374 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~-------------~~~~TD~~G~f~~~~L~pG~Y~I~ 374 (946)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|+|.-+.||.|.+.
T Consensus 134 l~v~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~p 200 (293)
T 1tmx_A 134 CWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPIP 200 (293)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccCC
Confidence 4689999999999999999998 343 135899999999999999999864
No 48
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=95.52 E-value=0.015 Score=53.70 Aligned_cols=58 Identities=19% Similarity=0.319 Sum_probs=46.7
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEE---ccccCceEEEEEecCCc
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLF---KNIIPGKYKLRASHPNL 193 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f---~~l~pG~Y~l~~~~~g~ 193 (946)
|+=.|++.. .|.|.+|+.|+|...+ +.+.+.+||+||+... ..+.+|.|+|......|
T Consensus 12 lstHVLDt~-------~G~PAagv~V~L~~~~-~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Y 72 (116)
T 3qva_A 12 LSTHILDIS-------TGTPAEGVTVSLSREG-ETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAW 72 (116)
T ss_dssp EEEEEEETT-------TTEECTTCEEEEEETT-EEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHH
T ss_pred eeeEEeecC-------CCcCCCCCEEEEEEcc-EeEEEeccCCCCCccccccccCCCceEEEEEeHHHH
Confidence 666788763 5899999999999766 7789999999999842 23678999999976555
No 49
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=95.50 E-value=0.026 Score=65.40 Aligned_cols=65 Identities=14% Similarity=0.103 Sum_probs=47.4
Q ss_pred eEEEeEEEcCCCCeeec-eEEEE--cc-EEeeEeCCCceEEEcccCCceEEEEEEeccceecceeeEEEccCc
Q 002258 326 FSVGGRVVDENDMGVEG-VKILV--DG-HERSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNM 394 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~g-a~V~l--~G-~~~~~TD~~G~f~~~~L~pG~Y~I~a~~~~y~~~~~~~v~v~p~~ 394 (946)
.+|+|+|. |.|.+. +.|.+ .+ +.-++||++|.|++.+|+||+|+|.+..+++.+... .+.|.++.
T Consensus 258 GtVsG~V~---G~~~~~~avv~~~~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~~~-~VtV~aG~ 326 (508)
T 1nkg_A 258 GKVAGTAS---GADSSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATS-SVTVSAGS 326 (508)
T ss_dssp BEEEEEEE---SSCTTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEE-EEEECTTC
T ss_pred cEEEEEEc---CccCCceEEEEEcCCCceeEEEECCCCcEEeCCcCCceEEEEEEECceEEEEe-EEEEcCCC
Confidence 58999988 555222 23332 22 233799999999999999999999999999755444 56777654
No 50
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=95.48 E-value=0.014 Score=62.82 Aligned_cols=73 Identities=23% Similarity=0.313 Sum_probs=55.5
Q ss_pred EEEEccCCeeeeeeeeccceEEeEEEeeC--------CCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCC
Q 002258 202 EVELGFENGEVDDIFFAPGYEIRGLVVAQ--------GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDAD 273 (946)
Q Consensus 202 ~v~v~~~~~~v~~~l~v~g~~v~G~V~~~--------G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~ 273 (946)
.+.+..+...+.+...+.++.|+|-|..+ ...-+|++|.+...+ .+++||++
T Consensus 139 ~~~~~nG~V~V~~~~~~~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~--------------------~sa~tD~~ 198 (321)
T 3kcp_A 139 ETDLINGGVLVTNKPVIEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTE--------------------LYAVTDAN 198 (321)
T ss_dssp CCEEECEEEEECCCCCCSSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTSS--------------------CEEECCTT
T ss_pred ceEEECCEEEECCCCCCCCceEEEEEccccccccccchhccCCcEEEEEecc--------------------ceeEECCC
Confidence 34445555556556677899999998853 245678888876552 58999999
Q ss_pred ceEEECCcCCee--EEEEEEEcC
Q 002258 274 GKFMFKSVPCGQ--YELVPHYKG 294 (946)
Q Consensus 274 G~f~f~~Lp~G~--Y~v~~~~~~ 294 (946)
|+|++.++|+|+ |+|....++
T Consensus 199 G~f~I~~vp~~~~~ytl~i~~~g 221 (321)
T 3kcp_A 199 GYFEITGVPANASGYTLKISRAT 221 (321)
T ss_dssp SEEEEEEECCEEEEEEEEEECTE
T ss_pred ceEEEeccCCCCccEEEEEeecC
Confidence 999999999998 999996444
No 51
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=95.47 E-value=0.073 Score=71.12 Aligned_cols=214 Identities=14% Similarity=0.173 Sum_probs=108.7
Q ss_pred eEEEEEeCCCcEEEE--EE-eCCCceEEEc-----cccCceEEEEEecCCceEEeeccEEEEEccC---C--eeee--ee
Q 002258 151 VNVELLSHSGDLISS--VI-TSSEGSYLFK-----NIIPGKYKLRASHPNLSVEVRGSTEVELGFE---N--GEVD--DI 215 (946)
Q Consensus 151 v~V~L~~~~g~~v~~--tt-Td~~G~f~f~-----~l~pG~Y~l~~~~~g~~~~~~~~~~v~v~~~---~--~~v~--~~ 215 (946)
++|+|.+++|..+.+ .. ||..|.|.++ +.+.|.|+|++...+..-. ..+..|.|..= . ..+. ..
T Consensus 162 v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~-~~~~~F~VeEYvlP~feV~i~~~~~ 240 (1661)
T 2b39_A 162 VFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYEDSPQQ-VFSAEFEVKEYVLPSFEVQLEPEEK 240 (1661)
T ss_dssp EEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEETTEEEE-EEEEEEEECCCCCCSBCCEEECSSS
T ss_pred EEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEeecCCCc-eEEEEEEEEEccCCcEEEEEEcCcc
Confidence 789999999976654 23 4588977653 3357999999975431100 01123433310 0 0011 11
Q ss_pred eeccc--eEEeEEEee---CCCceeceE-EEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEEC--CcC-----
Q 002258 216 FFAPG--YEIRGLVVA---QGNPILGVH-IYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK--SVP----- 282 (946)
Q Consensus 216 l~v~g--~~v~G~V~~---~G~Pi~Ga~-V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~--~Lp----- 282 (946)
....+ -.+..+|.. .|.|++|.. +.+.......- ...+ ........+|.+|.|.|. .++
T Consensus 241 ~~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~~~~~~~~~~------~~~~--~~~~~~~~~dg~G~~~l~~~~~~~~~~~ 312 (1661)
T 2b39_A 241 FYYIDDPDGLKVNIIARFLYGEQVDGTAFVIFGVQDGDRR------ISLT--HSLTRVPINDGNGEAILKRQVLLNGVQP 312 (1661)
T ss_dssp SCCSSCSSCCCEEEECBBSSSCBCCEEEEEEEEEECSSCE------ECCG--GGCEEEEESSSCEEECCCTTTTSSSCTT
T ss_pred eEecCCCcEEEEEEEEEEcCCCceeeEEEEEEEEecCCcc------cccC--cceeeeEecCCeEEEEEehHHhhccccc
Confidence 11122 334455553 499999863 22222111000 0000 001235568999999984 111
Q ss_pred -------CeeEEEEEEE-c--CCceE------EEecCceEEEEEeccceeeeceeEEEeeE--EEeEEEcCCCCeeeceE
Q 002258 283 -------CGQYELVPHY-K--GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTGFS--VGGRVVDENDMGVEGVK 344 (946)
Q Consensus 283 -------~G~Y~v~~~~-~--~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g~s--V~G~V~d~~G~pl~ga~ 344 (946)
.-.+.|.+.. + +.... +.+.|....+.+... + .+-.+|.. +.-.+++.+|+|+++..
T Consensus 313 ~~~~~~~~~~~~v~a~V~e~~gg~~~~~~~~~i~i~~~~~~i~~~~~----~-~~~~~g~~~~~~v~~~~~dG~p~~~~~ 387 (1661)
T 2b39_A 313 SRADALVGKSIYVSATVILQSGSDMVEAERTGIPIVTSPYQIHFTKT----P-KFFKPAMPFDLMVYVTNPDGSPARHIP 387 (1661)
T ss_dssp CHHHHSSSCBCEEEEEEEETTTCCCCEECCCCCBCCSCSSBCCBSSC----C-SEECSSEEEECCBBCBBTTTBCCSSCC
T ss_pred CChhhccCcEEEEEEEEEEcCCceEEEeeeEEEEEEEeeEEEEEEeC----C-CccCCCCcEEEEEEEEcCCCCCcCCce
Confidence 1246666532 2 22111 112222222222111 1 12222333 33345688999999999
Q ss_pred EEE-ccEEeeEeCCCc--eEEEcccC--CceEEEEEEecc
Q 002258 345 ILV-DGHERSITDRDG--YYKLDQVT--SNRYTIEAVKVH 379 (946)
Q Consensus 345 V~l-~G~~~~~TD~~G--~f~~~~L~--pG~Y~I~a~~~~ 379 (946)
|.+ .++...+||++| .|.| +++ .|.|.|++....
T Consensus 388 v~v~~~~~~~~t~~~G~~~~~i-~~~~~~g~y~l~v~~~d 426 (1661)
T 2b39_A 388 VVTQGSNVQSLTQDDGVAKLSI-NTQNKRDPLTITVRTKK 426 (1661)
T ss_dssp EEETTCCCCCCCSSSCBCCCEE-EECSCCSCEEEEEEECC
T ss_pred EEEeccceEEEECCCCeEEEEE-ECCCCCcEEEEEEEEcC
Confidence 988 444446889999 5666 344 478999987643
No 52
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=95.47 E-value=0.014 Score=60.80 Aligned_cols=48 Identities=31% Similarity=0.511 Sum_probs=41.3
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccEE-------------------eeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGHE-------------------RSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~~-------------------~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-|.||.|.+
T Consensus 78 i~l~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 78 IIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 4689999999999999999998 2311 2489999999999999999987
No 53
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=95.41 E-value=0.027 Score=61.04 Aligned_cols=55 Identities=31% Similarity=0.528 Sum_probs=44.7
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCC--C------------cEEEEEEeCCCceEEEccccCceEEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G------------DLISSVITSSEGSYLFKNIIPGKYKLRA 188 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g------------~~v~~ttTd~~G~f~f~~l~pG~Y~l~~ 188 (946)
..|.|+|++. +|.|++||.|++...+ | ..-....||++|+|+|.-+.||.|.+-.
T Consensus 133 l~v~G~V~D~--------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~p~ 201 (311)
T 2azq_A 133 MFLQGQVFDA--------NGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGCDP 201 (311)
T ss_dssp EEEEEEEECS--------SSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEECCT
T ss_pred EEEEEEEEcC--------CCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCCCC
Confidence 4578999985 3699999999998654 3 1245789999999999999999998643
No 54
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=95.38 E-value=0.02 Score=60.39 Aligned_cols=55 Identities=20% Similarity=0.511 Sum_probs=44.9
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCC--Cc------------EEEEEEeCCCceEEEccccCceEEEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GD------------LISSVITSSEGSYLFKNIIPGKYKLRA 188 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g~------------~v~~ttTd~~G~f~f~~l~pG~Y~l~~ 188 (946)
..|+|+|++. +|+|++||.|++...+ |. .-....||++|+|+|..+.||.|.+-.
T Consensus 103 l~l~G~V~D~--------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~p~ 171 (254)
T 2boy_A 103 LIFRGEVVDQ--------EGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEIPK 171 (254)
T ss_dssp EEEEEEEECT--------TSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECCT
T ss_pred EEEEEEEECC--------CCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccCCC
Confidence 4578999985 3799999999998554 41 145788999999999999999998743
No 55
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=95.29 E-value=0.019 Score=61.26 Aligned_cols=49 Identities=29% Similarity=0.574 Sum_probs=41.7
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccE--------------EeeEeCCCceEEEcccCCceEEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGH--------------ERSITDRDGYYKLDQVTSNRYTIE 374 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~--------------~~~~TD~~G~f~~~~L~pG~Y~I~ 374 (946)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|.|.-+.||.|.+-
T Consensus 132 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~p 199 (280)
T 3hhy_A 132 LVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQIP 199 (280)
T ss_dssp EEEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCCC
Confidence 4689999999999999999998 332 125899999999999999999764
No 56
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=95.28 E-value=0.019 Score=61.68 Aligned_cols=49 Identities=31% Similarity=0.414 Sum_probs=41.8
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccE--------------EeeEeCCCceEEEcccCCceEEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGH--------------ERSITDRDGYYKLDQVTSNRYTIE 374 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~--------------~~~~TD~~G~f~~~~L~pG~Y~I~ 374 (946)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|.|.-+.||.|.+-
T Consensus 130 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~p 197 (290)
T 3n9t_A 130 ALVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPIP 197 (290)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCCC
Confidence 4689999999999999999998 332 124899999999999999999863
No 57
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=95.25 E-value=0.27 Score=65.72 Aligned_cols=210 Identities=15% Similarity=0.104 Sum_probs=104.9
Q ss_pred ceEEEEEeCCCcEEEE-EEeCCCceEEE------ccccCceEEEEEecCCce-------EEe----eccEEEEEccCCee
Q 002258 150 NVNVELLSHSGDLISS-VITSSEGSYLF------KNIIPGKYKLRASHPNLS-------VEV----RGSTEVELGFENGE 211 (946)
Q Consensus 150 Gv~V~L~~~~g~~v~~-ttTd~~G~f~f------~~l~pG~Y~l~~~~~g~~-------~~~----~~~~~v~v~~~~~~ 211 (946)
-++|+|.+++|..+.+ ..+...|.|.| .+.+.|.|+|++...++. +.| .|..+|++....
T Consensus 158 ~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~s~~F~VeEYvlP~feV~i~~~~-- 235 (1676)
T 3cu7_A 158 ETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEY-- 235 (1676)
T ss_dssp CEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSSSCCCEEEEEEEECEECCCSSEECCEESC--
T ss_pred ceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecCCCCceEEEEEEEccccCceEEEEEEccC--
Confidence 3789999999955432 33348898884 445679999999865421 111 122233222111
Q ss_pred eeeeeeccc-eEEeEEEee---CCCce-ec-eEEEEEECCCCcccCCCCCCC-ccCccceeeEEEecCCceEEEC----C
Q 002258 212 VDDIFFAPG-YEIRGLVVA---QGNPI-LG-VHIYLYSDDVGKVDCPQGSGN-ALGERKALCHAVSDADGKFMFK----S 280 (946)
Q Consensus 212 v~~~l~v~g-~~v~G~V~~---~G~Pi-~G-a~V~L~~~~~~~~~c~~g~~~-~~~~g~~~~~~~TD~~G~f~f~----~ 280 (946)
..+.+.+ -.+..+|.. .|.|+ .| +.|.+.... .|..+... .+. .... ++..+|.+.|. .
T Consensus 236 --~~~~~~d~~~~~v~v~A~Y~yG~PV~~G~a~v~~~~~~----~~~~~~~~~~~~---~~~~-~~l~~G~~~~~~~~~~ 305 (1676)
T 3cu7_A 236 --NFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIRE----DLKDDQKEMMQT---AMQN-TMLINGIAQVTFDSET 305 (1676)
T ss_dssp --SEECSTTSSCCEEEECEEETTTEECSEEEEEEEEEEES----CSSCSCCEEESS---CCBC-CCEETTBEEEECCTTT
T ss_pred --cEEEecCCCEEEEEEEEEEcCCceeecCeEEEEEEEee----ccCCCcceeccc---ceEE-EEeccceEEEEEeHHH
Confidence 1122222 234444443 49999 88 666554331 00000000 000 0011 12137777662 1
Q ss_pred cC------------CeeEEEEEEEc---CCceE------EEecCceEEEEEeccceeeeceeEEEe--eEEEeEEEcCCC
Q 002258 281 VP------------CGQYELVPHYK---GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDEND 337 (946)
Q Consensus 281 Lp------------~G~Y~v~~~~~---~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G 337 (946)
+. +..+.|.+... +.... +.+.|....+.+... +. +-.+| +.+.-.+++.+|
T Consensus 306 ~~~~~~~~~~~~~~~~~l~v~a~V~E~~gg~~~~~~~~~i~i~~~~~~i~~~~~----~~-~~k~g~p~~~~v~~~~~dG 380 (1676)
T 3cu7_A 306 AVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVAT----PL-FLKPGIPYPIKVQVKDSLD 380 (1676)
T ss_dssp TTTTTSSCCCSTTCCSEEEEEEEEEESSSCCCEEEEECCCEECSCSEEECCBSC----CS-EECSSSCEEEEEEEEETTC
T ss_pred hhhhccccchhhccCceEEEEEEEEECCCCeEEEeeEEEEEEEeeeEEEEEecC----CC-cccCCCcEEEEEEEEcCCC
Confidence 11 23566665421 11111 123333333332211 11 11122 345556788999
Q ss_pred CeeeceEEEEcc-EE-------------eeEeCCCc--eEEEcccCCce--EEEEEEe
Q 002258 338 MGVEGVKILVDG-HE-------------RSITDRDG--YYKLDQVTSNR--YTIEAVK 377 (946)
Q Consensus 338 ~pl~ga~V~l~G-~~-------------~~~TD~~G--~f~~~~L~pG~--Y~I~a~~ 377 (946)
+|+++..|.+.. .. ..+||++| .|.| +++.|. |.|++..
T Consensus 381 ~p~~~~~v~l~~~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~-~~~~~~~~~~l~v~~ 437 (1676)
T 3cu7_A 381 QLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVL-NLPSGVTVLEFNVKT 437 (1676)
T ss_dssp CBCCSCEEEEEEEEEETTSCEEECCCEEEECCSSSCEEEEEE-CCCTTEEEEEEEEEE
T ss_pred CccCcceEEEeccccccccccccccccceeEECCCCeEEEEE-ECCCCCeEEEEEEEE
Confidence 999999998832 11 24789999 5666 455553 6777764
No 58
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=95.22 E-value=0.015 Score=59.76 Aligned_cols=48 Identities=17% Similarity=0.309 Sum_probs=40.4
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccE-------------------EeeEe-CCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGH-------------------ERSIT-DRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~-------------------~~~~T-D~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|. -...| |++|+|+|.-|.||.|..
T Consensus 53 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp~ 125 (209)
T 2bum_A 53 IRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPG 125 (209)
T ss_dssp EEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCBC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcccC
Confidence 4789999999999999999998 331 12467 999999999999999864
No 59
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=95.20 E-value=0.018 Score=58.62 Aligned_cols=49 Identities=27% Similarity=0.268 Sum_probs=41.7
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccEE--------------eeEeCCC-ceEEEcccCCceEEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRD-GYYKLDQVTSNRYTIE 374 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~~--------------~~~TD~~-G~f~~~~L~pG~Y~I~ 374 (946)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++ |+|.|.-+.||.|.+.
T Consensus 49 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~~ 117 (200)
T 3t63_A 49 ILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNA 117 (200)
T ss_dssp EEEEECEECTTSCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEECT
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCCC
Confidence 4689999999999999999998 3321 2489999 9999999999999863
No 60
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=95.15 E-value=0.049 Score=57.02 Aligned_cols=69 Identities=13% Similarity=0.216 Sum_probs=47.0
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCC-CCCccC--ccceeeEEEecCCceEEECCcCCeeEEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQG-SGNALG--ERKALCHAVSDADGKFMFKSVPCGQYELV 289 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g-~~~~~~--~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~ 289 (946)
..|.|+|++ +|+||+||.|.++..+......... ....+. +........||++|+|.|..+.||.|.+.
T Consensus 79 i~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~~ 151 (241)
T 2bum_B 79 VIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPWR 151 (241)
T ss_dssp EEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEES
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCccccC
Confidence 368899997 6999999999999765321110000 000011 11124678999999999999999999874
No 61
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=95.13 E-value=0.027 Score=59.51 Aligned_cols=56 Identities=18% Similarity=0.367 Sum_probs=45.7
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCC--C------------cEEEEEEeCCCceEEEccccCceEEEEEe
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G------------DLISSVITSSEGSYLFKNIIPGKYKLRAS 189 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g------------~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~ 189 (946)
..|+|+|++. +|+|++||.|++...+ | ..-....||++|+|+|.-+.||-|-+-..
T Consensus 100 l~v~G~V~D~--------~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypip~d 169 (260)
T 3th1_A 100 LIIRGTVRSD--------TGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQIPYE 169 (260)
T ss_dssp EEEEEEEEET--------TSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEECCCS
T ss_pred EEEEEEEECC--------CCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCCCCC
Confidence 3588999985 3699999999998654 3 12568899999999999999999987543
No 62
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=95.12 E-value=3.1 Score=55.19 Aligned_cols=228 Identities=21% Similarity=0.214 Sum_probs=114.8
Q ss_pred CcEEEeEEEeccCCccccCCCCCC-cceEEEEEeCCCcEEEEEEe--CCCceEEEccc-cCceEEEEEecCCc------e
Q 002258 125 GFTLLGRVVGAIGGESCLDKGGGP-SNVNVELLSHSGDLISSVIT--SSEGSYLFKNI-IPGKYKLRASHPNL------S 194 (946)
Q Consensus 125 g~~IsG~V~~~~g~~s~~~~g~pl-aGv~V~L~~~~g~~v~~ttT--d~~G~f~f~~l-~pG~Y~l~~~~~g~------~ 194 (946)
|-+|.-+++..+. +..|+ .-++|.|.+++|..+..... +-.+.|.+..- +.|.|+|.+...+. .
T Consensus 140 GqtV~~rvi~~~~------~~~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~~~~~~~~~~ 213 (1642)
T 3prx_B 140 GSPVLYRVFSMDH------NTSKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAY 213 (1642)
T ss_dssp TCEEEEEEEECCC-----------CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEEEEcC------CCcccCceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeCCCCcEEEEE
Confidence 4466666655421 12333 12678888999976654332 24566766655 56999999975432 1
Q ss_pred EEe----eccEEEEEccCCeeeeeeeecc-ceEEeEEEee---CCCceeceEEEEEE-C--CCCcccCCCCCCCccCccc
Q 002258 195 VEV----RGSTEVELGFENGEVDDIFFAP-GYEIRGLVVA---QGNPILGVHIYLYS-D--DVGKVDCPQGSGNALGERK 263 (946)
Q Consensus 195 ~~~----~~~~~v~v~~~~~~v~~~l~v~-g~~v~G~V~~---~G~Pi~Ga~V~L~~-~--~~~~~~c~~g~~~~~~~g~ 263 (946)
+.| .|+.+|.+..... .+.+. +-.+...|.+ -|+|++|.....+. . +....-| ..
T Consensus 214 F~VeeYvlP~FeV~v~~~~~----~~~~~~~~~~~v~V~ArY~yGkPV~G~v~v~fg~~~~~~~~~~~----------~~ 279 (1642)
T 3prx_B 214 FDVRKYVLPSFEVRLQPSEK----FFYIDGNENFHVSITARYLYGEEVEGVAFVLFGVKIDDAKKSIP----------DS 279 (1642)
T ss_dssp EEECSCCCCSEEEEEEESSS----EEETTSCCCEEEEEEEEETTSCBCCEEEEEEEEEEETTEEEECG----------GG
T ss_pred EEEEEEecCcEEEEEeccce----eEEecCCCeEEEEEEEEeCCCCceeeeEEEEEEeccCCCccccc----------cc
Confidence 221 2334444432211 11222 3345555554 49999985322221 1 1000000 00
Q ss_pred eeeEEEecCCceEEECCc------CC------eeEEEEEEEc---CCceE------EEecCceEEEEEeccceeeeceeE
Q 002258 264 ALCHAVSDADGKFMFKSV------PC------GQYELVPHYK---GENTV------FDVSPSLVSMSVRHQHVTVPEKFQ 322 (946)
Q Consensus 264 ~~~~~~TD~~G~f~f~~L------p~------G~Y~v~~~~~---~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~ 322 (946)
......+|.+|.|.|.-- +. ..+.|.+.-. +.... +.+.+....+.+... + .|-
T Consensus 280 l~~~~~~dg~G~~~~~~~~~~~~~~~~~~~~~~~l~V~atV~eE~gg~~~~~~~~~i~i~~~~~~i~f~~~----~-~~~ 354 (1642)
T 3prx_B 280 LTRIPIIDGDGKATLKRDTFRSRFPNLNELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPYQIHFTKT----P-KYF 354 (1642)
T ss_dssp CEEEEEBTTEEEEEECHHHHHHHCCCGGGTSSEEEEEEEEEEETTSSCEEEEEEEEEEEESCSCEEECTTS----C-SEE
T ss_pred cceeEEecCcEEEEEehhhhcccccccccccceEEEEEEEEEEeCCCCEEEeeeeeEEEEecceEEEEEeC----c-ccc
Confidence 123457899999997521 11 1244444321 21211 112222222222210 1 122
Q ss_pred EEe--eEEEeEEEcCCCCeeeceEEEE-ccEEeeEeCCCceEEEc-ccCC--ceEEEEEEe
Q 002258 323 VTG--FSVGGRVVDENDMGVEGVKILV-DGHERSITDRDGYYKLD-QVTS--NRYTIEAVK 377 (946)
Q Consensus 323 ~~g--~sV~G~V~d~~G~pl~ga~V~l-~G~~~~~TD~~G~f~~~-~L~p--G~Y~I~a~~ 377 (946)
.+| +.+.-+|.+++|.|++++.|.+ .+....+||++|...|. +.+. ..+.|++..
T Consensus 355 kpG~p~~~~v~v~~~dg~P~~~~~V~v~~~~~~~tTd~~G~a~f~i~t~~~~~~l~i~~~~ 415 (1642)
T 3prx_B 355 KPGMPYELTVYVTNPDGSPAAHVPVVSEAFHSMGTTLSDGTAKLILNIPLNAQSLPITVRT 415 (1642)
T ss_dssp CTTSCEEEEEEEECTTSCBCCSCEEEEGGGTEEEECCTTSEEEEEECCCTTCCCCEEEEEC
T ss_pred CCCCCEEEEEEEECCCCCCCCCceEEEEeccceeeeCCCceEEEEEECCCCCcEEEEEEEE
Confidence 233 4555567889999999999998 34444689999975553 3333 457787763
No 63
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=95.01 E-value=0.039 Score=59.80 Aligned_cols=69 Identities=9% Similarity=0.213 Sum_probs=47.3
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELV 289 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~ 289 (946)
..+.|+|++ +|+||+||.|.++..+...............+........||++|+|.|..+.||.|.+-
T Consensus 134 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~p 203 (311)
T 1dmh_A 134 LILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCP 203 (311)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccCC
Confidence 367899997 699999999999987632111110000000111235678999999999999999999864
No 64
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=95.01 E-value=1.8 Score=51.76 Aligned_cols=208 Identities=19% Similarity=0.175 Sum_probs=106.0
Q ss_pred eEEEEEeCCCcEEEEEE-e-CCCceEEEccc-cCceEEEEEecCCc------eEEe----eccEEEEEccCCeeeeeeee
Q 002258 151 VNVELLSHSGDLISSVI-T-SSEGSYLFKNI-IPGKYKLRASHPNL------SVEV----RGSTEVELGFENGEVDDIFF 217 (946)
Q Consensus 151 v~V~L~~~~g~~v~~tt-T-d~~G~f~f~~l-~pG~Y~l~~~~~g~------~~~~----~~~~~v~v~~~~~~v~~~l~ 217 (946)
++|+|.+++|..+.... + +-.+.|.+..- +.|.|+|.+...+. .+.+ .++.+|.+..... .+.
T Consensus 139 ~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~~~F~Veeyv~P~feV~~~~~~~----~~~ 214 (627)
T 3hrz_A 139 VIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEK----FFY 214 (627)
T ss_dssp EEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETTCSCCEEEEEEECCCCCCSEEEEEEESSS----EEE
T ss_pred EEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECCCceEEEEEEEEeEEECCcEEEEEecCcc----eEE
Confidence 67888999997665422 2 23566666644 46999999975431 1222 2344554443221 111
Q ss_pred cc-ceEEeEEEee---CCCceec-eEEEEEECC-C-CcccCCCCCCCccCccceeeEEEecCCceEEECC----------
Q 002258 218 AP-GYEIRGLVVA---QGNPILG-VHIYLYSDD-V-GKVDCPQGSGNALGERKALCHAVSDADGKFMFKS---------- 280 (946)
Q Consensus 218 v~-g~~v~G~V~~---~G~Pi~G-a~V~L~~~~-~-~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~---------- 280 (946)
+. +-.+..+|.+ .|.|+.| |.+.+.... + ....|. ........|..|.|.|..
T Consensus 215 ~~~~~~~~~~v~a~y~~G~Pv~G~v~v~~~~~~~~~~~~~~~----------~~~~~~~~~G~g~~~l~~~~~~~~~~~~ 284 (627)
T 3hrz_A 215 IDGNENFHVSITARYLYGEEVEGVAFVLFGVKIDDAKKSIPD----------SLTRIPIIDGDGKATLKRDTFRSRFPNL 284 (627)
T ss_dssp TTCCCCEEEEEEEEETTSCBCCEEEEEEEEEEETTEEEECGG----------GCEEEEEBTTEEEEEECHHHHHHHCCCG
T ss_pred ecCCCEEEEEEEEEECCCCEeccEEEEEEEEccCCceeeccc----------hheeEEecCCeEEEEEEHHHhhhhhcch
Confidence 22 4445555554 4999998 344332111 1 000000 001234467778887642
Q ss_pred --cCCeeEEEEEEEc---CCceEE------EecCceEEEEEeccceeeeceeEEEe--eEEEeEEEcCCCCeeeceEEEE
Q 002258 281 --VPCGQYELVPHYK---GENTVF------DVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGVEGVKILV 347 (946)
Q Consensus 281 --Lp~G~Y~v~~~~~---~~~~~~------~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G~pl~ga~V~l 347 (946)
+-...+.|.+.-. +..... .+......+.... .+. +-.+| +.+.-+|.+.+|.|+++..|.+
T Consensus 285 ~~~~~~~l~v~a~V~~e~gt~~~~~~~~~i~i~~~~~~i~f~~----~~~-~~kpG~p~~~~v~v~~~dg~P~~~~~V~v 359 (627)
T 3hrz_A 285 NELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPYQIHFTK----TPK-YFKPGMPYELTVYVTNPDGSPAAHVPVVS 359 (627)
T ss_dssp GGGTTCEEEEEEEEEETTSSCEEEEEEEEEEEESSSCEEECTT----SCS-EECTTSCEEEEEEEECTTSCBCTTCEEEE
T ss_pred hhhcCcEEEEEEEEEEecCCeEEEcccceEEEEeecEEEEEEe----ccc-cccCCCcEEEEEEEECCCCCcCCCceEEE
Confidence 1122455555322 211111 1111111222111 011 11223 4556677889999999999998
Q ss_pred -ccEEeeEeCCCceEEEc-ccCC--ceEEEEEEe
Q 002258 348 -DGHERSITDRDGYYKLD-QVTS--NRYTIEAVK 377 (946)
Q Consensus 348 -~G~~~~~TD~~G~f~~~-~L~p--G~Y~I~a~~ 377 (946)
.+....+||++|...|. +.+. +.+.|++..
T Consensus 360 ~~~~~~~~td~~G~a~f~i~t~~~~~~l~i~~~~ 393 (627)
T 3hrz_A 360 EAFHSMGTTLSDGTAKLILNIPLNAQSLPITVRT 393 (627)
T ss_dssp GGGTEEEECCTTSEEEEEECCCTTCSEEEEEEEE
T ss_pred EcCcceeEECCCCeEEEEEECCCCCcEEEEEEEe
Confidence 34444689999986552 2332 457777764
No 65
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=94.93 E-value=0.039 Score=56.14 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=47.2
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCC-ceEEECCcCCeeEEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDAD-GKFMFKSVPCGQYELV 289 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~-G~f~f~~Lp~G~Y~v~ 289 (946)
..|.|+|++ +|+||+||.|.++..+.......+... .+ +....+...||++ |+|.|..+.||.|...
T Consensus 49 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~-~~-~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~~ 117 (200)
T 3t63_A 49 ILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNL-EN-AFNSFGRTATTFDAGEWTLHTVKPGVVNNA 117 (200)
T ss_dssp EEEEECEECTTSCBCSSCEEEEEECCTTSCCCCBCCT-TS-SBCSEEEEECCSSCCSEEEEEECCCCEECT
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCC-CC-CccccceEecCCCCCEEEEEEECCcCcCCC
Confidence 467899997 699999999999987532111111100 01 1123578899999 9999999999999864
No 66
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=94.93 E-value=9 Score=50.30 Aligned_cols=213 Identities=17% Similarity=0.213 Sum_probs=109.8
Q ss_pred CCCcce--EEEEEeCCCcEEEE--EEeCCCceEEEc-----cccCceEEEEEecC-Cce----EEe----eccEEEEEcc
Q 002258 146 GGPSNV--NVELLSHSGDLISS--VITSSEGSYLFK-----NIIPGKYKLRASHP-NLS----VEV----RGSTEVELGF 207 (946)
Q Consensus 146 ~plaGv--~V~L~~~~g~~v~~--ttTd~~G~f~f~-----~l~pG~Y~l~~~~~-g~~----~~~----~~~~~v~v~~ 207 (946)
.|...- .|++.+++|..+.+ ..++..|.++.+ ....|.|+|.+... +-. +.+ .|+.+|.+..
T Consensus 133 ~p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~~~~~~~~~F~V~eYvlP~FeV~v~~ 212 (1451)
T 4acq_A 133 HPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVEEFVLPKFEVQVTV 212 (1451)
T ss_dssp CBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTTCCEEEEEEEECCCCCCSCEEEEEC
T ss_pred cCccCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEecCCceEEEEEEEeeeeCCcEEEEEeC
Confidence 454432 57889999977654 567888876543 22459999999764 221 211 2334444432
Q ss_pred CCeeeeeeeeccceEEeEEEee---CCCceeceEEEEEE--CCCCcccCCCCCCCccCcccee---eEEEecCCceEEEC
Q 002258 208 ENGEVDDIFFAPGYEIRGLVVA---QGNPILGVHIYLYS--DDVGKVDCPQGSGNALGERKAL---CHAVSDADGKFMFK 279 (946)
Q Consensus 208 ~~~~v~~~l~v~g~~v~G~V~~---~G~Pi~Ga~V~L~~--~~~~~~~c~~g~~~~~~~g~~~---~~~~TD~~G~f~f~ 279 (946)
... +.+.+-.+.+.|.+ -|+|+.| .+.+.- ....-..|... ....+ ....+|.+|.+.+.
T Consensus 213 ~~~-----~~~~~~~~~~~i~a~Y~~G~pV~G-~~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~G~~~~~ 280 (1451)
T 4acq_A 213 PKI-----ITILEEEMNVSVCGLYTYGKPVPG-HVTVSICRKYSDASDCHGE------DSQAFCEKFSGQLNSHGCFYQQ 280 (1451)
T ss_dssp CSE-----EESSCSCCEEEEEEECSSSCBCCC-EEEECCBCCCTTTTTSCSS------CCCCCBCCEEEECCSSCCCEEE
T ss_pred Cce-----EeecCCEEEEEEEEEEcCCCEEcc-eEEEEEEEecccccccccc------ccccccceeeEEEcCCeEEEEE
Confidence 221 22333344555554 4999999 444432 11100011100 00011 24678889988775
Q ss_pred Cc----C------CeeEEEEEEEcCC--ce--------EEEecCceEEEEEeccceeeeceeEEEe--eEEEeEEEcCCC
Q 002258 280 SV----P------CGQYELVPHYKGE--NT--------VFDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDEND 337 (946)
Q Consensus 280 ~L----p------~G~Y~v~~~~~~~--~~--------~~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G 337 (946)
-. . ...+.|.+.-... +. .+.-+|-.+.|. . .+.-|. +| |.+.-+|.+++|
T Consensus 281 ~~~~~~~~~~~~~~~~l~V~atVtE~gtg~~~~~~~~i~i~~s~~~i~f~--~----t~~~fk-PG~pf~~~v~v~~~dg 353 (1451)
T 4acq_A 281 VKTKVFQLKRKEYEMKLHTEAQIQEEGTVVELTGRQSSEITRTITKLSFV--K----VDSHFR-QGIPFFGQVRLVDGKG 353 (1451)
T ss_dssp CCGGGSCSSSSCCBCBCEEEEECSSSCCSCCEEECCCCEEECCCSEEEEE--E----ECSEEC-SSSCCEEEEEEECTTS
T ss_pred EEHHHhcchhhccCeEEEEEEEEEEccceEEEeceEEEEEEeeeeEEEEe--c----CCCccc-CCCcEEEEEEEEcCCC
Confidence 11 1 1244555532211 11 111222222221 1 111122 23 456667789999
Q ss_pred CeeeceEEEE--ccE---EeeEeCCCceEEEc-ccC---CceEEEEEEe
Q 002258 338 MGVEGVKILV--DGH---ERSITDRDGYYKLD-QVT---SNRYTIEAVK 377 (946)
Q Consensus 338 ~pl~ga~V~l--~G~---~~~~TD~~G~f~~~-~L~---pG~Y~I~a~~ 377 (946)
.|+++..|.+ ++. ...+||++|...|. +.+ .+.++|++..
T Consensus 354 ~P~~~~~v~v~~~~~~~~~~~~t~~~G~a~f~i~~~~~~~~~l~i~~~~ 402 (1451)
T 4acq_A 354 VPIPNKVIFIRGNEANYYSNATTDEHGLVQFSINTTNVMGTSLTVRVNY 402 (1451)
T ss_dssp CBCCSCBCEEEETTTCCCCCCBCCTTSEEEEECCCCSSSCEEEEEESCC
T ss_pred CcCCCceEEEEecccceeeeeEeCCCCcEEEEEeCCCCCCcEEEEEEEE
Confidence 9999998887 332 23589999986663 222 2467887653
No 67
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=94.88 E-value=0.043 Score=57.23 Aligned_cols=54 Identities=33% Similarity=0.514 Sum_probs=44.4
Q ss_pred cEEEeEEEeccCCccccCCCCCCcceEEEEEeCC--C-----------------cEEEEEEeCCCceEEEccccCceEEE
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G-----------------DLISSVITSSEGSYLFKNIIPGKYKL 186 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g-----------------~~v~~ttTd~~G~f~f~~l~pG~Y~l 186 (946)
..|+|+|++. +|.|++||.|++...+ | .......||++|+|+|.-|.||.|.+
T Consensus 78 i~l~G~V~D~--------~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 78 IIVAGRVVDQ--------YGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp EEEEEEEEET--------TSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECC--------CCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 4578999985 3799999999998654 3 12457899999999999999999987
Q ss_pred E
Q 002258 187 R 187 (946)
Q Consensus 187 ~ 187 (946)
.
T Consensus 150 p 150 (238)
T 3t63_M 150 R 150 (238)
T ss_dssp S
T ss_pred C
Confidence 3
No 68
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=94.84 E-value=0.058 Score=46.54 Aligned_cols=52 Identities=19% Similarity=0.084 Sum_probs=41.8
Q ss_pred EEeEEEcCCCCeeeceEEEE---c-cEE----eeEeCCCceEEEcccCCceEEEEEEeccc
Q 002258 328 VGGRVVDENDMGVEGVKILV---D-GHE----RSITDRDGYYKLDQVTSNRYTIEAVKVHY 380 (946)
Q Consensus 328 V~G~V~d~~G~pl~ga~V~l---~-G~~----~~~TD~~G~f~~~~L~pG~Y~I~a~~~~y 380 (946)
+.-+|+|.+|+|++||.|.+ | .+. ...||++|.+.| -.--|+-.|.+.+++.
T Consensus 3 ~~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~-~~G~Gd~~v~A~k~G~ 62 (82)
T 3e8v_A 3 GSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASL-TAGKGDMLVWASKDGR 62 (82)
T ss_dssp EEEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEE-ECCSEEEEEEEEETTE
T ss_pred EEEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEE-EEcCCceEEEeccCCE
Confidence 44478999999999999987 3 221 148999999999 6677889999988883
No 69
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=94.83 E-value=0.03 Score=51.68 Aligned_cols=59 Identities=15% Similarity=0.226 Sum_probs=45.2
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeCCC---cEEEEEEeCCCceEE----EccccCceEEEEEecCCc
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG---DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g---~~v~~ttTd~~G~f~----f~~l~pG~Y~l~~~~~g~ 193 (946)
|+=.|++.. .|.|.+|+.|+|...++ +.+.+.+||+||+.. =..+.+|.|+|......|
T Consensus 6 lstHVLDt~-------~G~PAagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 71 (114)
T 2g2n_A 6 LSVHILNQQ-------TGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDY 71 (114)
T ss_dssp EEEEEEETT-------TTEECCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEECHHHH
T ss_pred eEEEEecCC-------CcCCCCCCEEEEEEeCCCCcEEEEEEecCCCCccccccCCCCCCceEEEEEEEhhHh
Confidence 555677752 58999999999987554 468899999999972 124668999999976555
No 70
>3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A
Probab=94.80 E-value=0.043 Score=60.18 Aligned_cols=65 Identities=15% Similarity=0.326 Sum_probs=51.2
Q ss_pred CCCCcceEEEEEeCCCcEE-------------------------EEEEeCCCceEEEcccc-------Cc---eEEEEEe
Q 002258 145 GGGPSNVNVELLSHSGDLI-------------------------SSVITSSEGSYLFKNII-------PG---KYKLRAS 189 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~~v-------------------------~~ttTd~~G~f~f~~l~-------pG---~Y~l~~~ 189 (946)
+.+|+||.++|++.+|..+ ...+||++|.+.|.+|. || .|.|.+.
T Consensus 194 ~~~L~GA~F~L~~~~g~~~~~~~~~~k~~~~~~~~~~~~~~g~~~~~tt~~~G~~~~~gL~~~~~~~~~G~~~~Y~l~Et 273 (319)
T 3pf2_A 194 TQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTAVTYKLKET 273 (319)
T ss_dssp CSBCCCCEEEEEETTSCBCBCCHHHHHHCCCGGGBSSCCCTTSBCEEECCTTSEEEEEEECCSTTSCTTCCCEEEEEEEE
T ss_pred CcccCCCEEEEEeCCCCEEeeeeeccccccccceeccccccCceeEEEECCCCEEEEccccccccccCCCCcceEEEEEe
Confidence 6899999999998887433 15689999999999999 58 9999986
Q ss_pred c--CCceEEeeccEEEEEccCCe
Q 002258 190 H--PNLSVEVRGSTEVELGFENG 210 (946)
Q Consensus 190 ~--~g~~~~~~~~~~v~v~~~~~ 210 (946)
. .||.+. .....|+|..+..
T Consensus 274 kAP~GY~l~-~~~~~f~v~~~~~ 295 (319)
T 3pf2_A 274 KAPEGYVIP-DKEIEFTVSQTSY 295 (319)
T ss_dssp ECCTTBCCC-SSCEEEEECTTSS
T ss_pred eCCCCcccC-CCcEEEEEecCCc
Confidence 4 388876 3347788876554
No 71
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=94.75 E-value=0.029 Score=59.17 Aligned_cols=48 Identities=27% Similarity=0.460 Sum_probs=40.9
Q ss_pred eEEEeEEEcCCCCeeeceEEEE-----ccE---------------EeeEeCCCceEEEcccCCceEEE
Q 002258 326 FSVGGRVVDENDMGVEGVKILV-----DGH---------------ERSITDRDGYYKLDQVTSNRYTI 373 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l-----~G~---------------~~~~TD~~G~f~~~~L~pG~Y~I 373 (946)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|.|.-+.||.|-+
T Consensus 104 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 171 (257)
T 3o5u_A 104 MRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEI 171 (257)
T ss_dssp EEEEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcCC
Confidence 4689999999999999999998 231 12489999999999999999965
No 72
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=94.72 E-value=0.048 Score=58.18 Aligned_cols=68 Identities=16% Similarity=0.299 Sum_probs=47.5
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVP 290 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~ 290 (946)
..+.|+|.+ +|+||+||.|.++..+.......... ..+ +....+...||++|+|.|..+.||.|.+-.
T Consensus 132 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~-~~~-~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~p~ 200 (280)
T 3hhy_A 132 LVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAP-HLP-EWNLRGTIIADEEGRYEITTIQPAPYQIPT 200 (280)
T ss_dssp EEEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSST-TSC-TTTTEEEEECCTTSEEEEEEECCCCEECCC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCCCC-CCC-CCcceEEEEeCCCceEEEEEECCcCcCCCC
Confidence 467899997 69999999999997653211110000 011 112357889999999999999999998643
No 73
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=94.70 E-value=0.037 Score=59.48 Aligned_cols=67 Identities=22% Similarity=0.297 Sum_probs=47.4
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVP 290 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~ 290 (946)
..+.|+|++ +|+||+||.|.++..+.......+ .+.. +........||++|+|.|..+.||.|.+-.
T Consensus 134 l~v~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~--~~~~-~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~p~ 201 (293)
T 1tmx_A 134 CWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQ--YDDD-RTAARAHLLSGPDGGYAFWAITPTPYPIPH 201 (293)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCGGG--SSSC-CCCSEEEEECCTTSEEEEEEECCCCEECCC
T ss_pred EEEEEEEECCCCCCCCCceeEEEecCCCCcccCC--ccCC-CCCceeEEEeCCCceEEEEEECCCcccCCC
Confidence 357899997 699999999999977532111000 0011 122357789999999999999999998753
No 74
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=94.57 E-value=0.057 Score=57.93 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=47.5
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVP 290 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~ 290 (946)
..+.|+|++ +|+||+||.|.++..+.......... +.+ +....+...||++|+|.|..+.||.|.+-.
T Consensus 130 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~-~~~-~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~p~ 198 (290)
T 3n9t_A 130 ALVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDP-DQP-FGNLRGRYRSDNDGCFAIQTTVPVCYPIPT 198 (290)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTST-TSC-TTTTEEEEECCTTSEEEEEEECCCCEECCC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCC-CCC-CCCceeEEEeCCCceEEEEEeCCCCcCCCC
Confidence 357899997 69999999999997653211110000 011 112357889999999999999999998743
No 75
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=94.57 E-value=2.2 Score=42.82 Aligned_cols=144 Identities=15% Similarity=0.164 Sum_probs=79.6
Q ss_pred eEEEeEEEcCCCCeeeceEEEEccEEeeEeC-CCceEEEcccCCceEEEEEEeccce---ecc-eeeEEEccCcceeceE
Q 002258 326 FSVGGRVVDENDMGVEGVKILVDGHERSITD-RDGYYKLDQVTSNRYTIEAVKVHYK---FNK-LKEYMVLPNMASIADI 400 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l~G~~~~~TD-~~G~f~~~~L~pG~Y~I~a~~~~y~---~~~-~~~v~v~p~~~~i~dI 400 (946)
+.|.+... ++ .+|..+++++||+.+.... ..-.|.+..+.+|.|+|++++-... ... ...+.+.+..+....|
T Consensus 19 vtv~~~As-~d-~~V~~Ve~~~dg~~v~~~t~~~ys~~~~~~~~G~htlta~A~D~aGn~s~s~~v~vtV~~~~~Ptv~i 96 (190)
T 3pdd_A 19 INISATVK-SK-TPVSKVEFYNGDTLISSDTTAPYTAKITGAAVGAYNLKAVAVLSDGRRIESPVTPVLVKVIVKPTVKL 96 (190)
T ss_dssp EEEEEEEC-CS-SCEEEEEEEETTEEEEEECSSSEEEEECSCCSEEEEEEEEEEETTSCEEECCCEEEEEECCCCCEEEE
T ss_pred EEEEEEEe-CC-CCEEEEEEEECCEEEccccCCceEEEeccCCCccEEEEEEEEECCCCEeeecceeEEeccCCCCceee
Confidence 45666666 33 4899999999998875322 2235666677899999998764421 111 1134444211111122
Q ss_pred EE----------eeeEEEEEEEEcCCcccEEEEEEeCCCcccceeeeeCCceEEEEE--EcCeeEEEEEEeeCCCCCCce
Q 002258 401 KA----------ISYDICGVVRTVGSGNKVKVALTHGPDKVKPQVKQTDNNGNFCFE--VPPGEYRLSAMAATPESSSGI 468 (946)
Q Consensus 401 ~~----------~~~~v~G~V~~~~~~~~a~VtL~~~~~~~~~~~~~Td~~G~F~f~--l~pG~Y~v~~~~~~~e~~~G~ 468 (946)
.. ....|++...+.++ ...+|.+..+. . ..-++..+.|.+. .++|.|+|++.+.+.. |-
T Consensus 97 tsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~dg-~----~v~t~t~~~y~~~~~~~~G~~tl~a~A~D~a---Gn 167 (190)
T 3pdd_A 97 TAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDG-E----VIGSDREAPYEYEWKAVEGNHEISVIAYDDD---DA 167 (190)
T ss_dssp EECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEETT-E----EEEEECSSSEEEEEECCSEEEEEEEEEEETT---CC
T ss_pred cCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEECC-E----EEecccCCCEEEEEecCCeeEEEEEEEEECC---CC
Confidence 21 12355555553322 34666665432 1 2223445556665 5889999999987543 43
Q ss_pred EEcCCeEEEEEc
Q 002258 469 LFLPPYADVVVK 480 (946)
Q Consensus 469 ~~~p~~~~V~V~ 480 (946)
.-....+.|+|.
T Consensus 168 ~s~s~~vtvtv~ 179 (190)
T 3pdd_A 168 ASTPDSVKIFVK 179 (190)
T ss_dssp BCCCEEEEEEEB
T ss_pred EEecceEEEEEC
Confidence 224445666663
No 76
>3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris}
Probab=94.49 E-value=0.013 Score=68.08 Aligned_cols=65 Identities=14% Similarity=0.269 Sum_probs=51.1
Q ss_pred CCccccceEEEEEeCCCC-----EE-----------------EEEEeCCCcEEEcCCCC---------------CccEEE
Q 002258 47 ARLDYSHVTVELRTLDGL-----VK-----------------ESTQCAPNGYYFIPVYD---------------KGSFVI 89 (946)
Q Consensus 47 ~~i~~sgv~V~L~~~~G~-----~~-----------------~~t~t~~nG~y~ip~l~---------------~G~Y~l 89 (946)
....|+||+|+||+.+|. ++ ..-+|+.+|.+.|..|. +|+|.|
T Consensus 368 ~~~~LaGAeF~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~i~gL~~~d~~~~~~~~~~~~~~~Y~l 447 (488)
T 3uxf_A 368 DKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYVNGAKKDQLTDEDYYCL 447 (488)
T ss_dssp CGGGGTTCEEEEEEEEEETTEEEECCSCTTSSSCCCCCBTTBSCEECBTTTEEEEEEEECTTEETTEECCSCCTTSEEEE
T ss_pred CCcccCCCEEEEEeccCCcccceeeecccccccccceecCCceEEEECCCCEEEEcCeEeecccccccccccCCCCcEEE
Confidence 456799999999986643 11 12367789999988877 679998
Q ss_pred -EEEcCCCcccCCceeEEEEcCC
Q 002258 90 -KVNGPEGWSWNPDKVAVTVDDT 111 (946)
Q Consensus 90 -~v~~P~G~~~~p~~v~v~vd~~ 111 (946)
+.++|.||.+.++++.++|..+
T Consensus 448 ~EtkAP~GY~l~~~pi~f~v~~~ 470 (488)
T 3uxf_A 448 VETKAPEGYNLQADPLPFRVLAE 470 (488)
T ss_dssp EEEECCTTBCCCSSCEEECCCHH
T ss_pred EEeeCCCCcccCCCcEEEEEecC
Confidence 8999999999999888887653
No 77
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=94.48 E-value=6.7 Score=42.59 Aligned_cols=269 Identities=12% Similarity=0.131 Sum_probs=122.2
Q ss_pred EEEecCCceEEECCcCCe-eEEEEEEEcCCceEEEecCceEEEEEeccceeeeceeEEEe---eEEEeEEEc--CCCCee
Q 002258 267 HAVSDADGKFMFKSVPCG-QYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTG---FSVGGRVVD--ENDMGV 340 (946)
Q Consensus 267 ~~~TD~~G~f~f~~Lp~G-~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g---~sV~G~V~d--~~G~pl 340 (946)
.......-.|.+.+|.|| .|.+++....... . -.|.. +.....-.. +..+.+.. -+| +|.. ..+.++
T Consensus 52 ~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-~-s~~~~--~~~~~~~p~-p~~l~~~~~~~~si--~l~W~~~~~~~i 124 (375)
T 3t1w_A 52 EVVHADQSSCTFDNLSPGLEYNVSVYTVKDDK-E-SVPIS--DTIIPEVPQ-LTDLSFVDITDSSI--GLRWTPLNSSTI 124 (375)
T ss_dssp EEEETTCCEEEECCCCTTCCEEEEEEEEETTE-E-CCCEE--EEECCCCCC-CSCCEEECCCSSEE--EEECCCCCCTTE
T ss_pred EEcCCCccEEEEcCCcCCCEEEEEEEEEcCCC-C-CCcEE--eeEcCCCCC-CceEEEEecCCCeE--EEEEECCCCCCc
Confidence 344556679999999999 5877764332211 0 01111 111110000 11122111 111 2222 234567
Q ss_pred eceEEEE--ccEE-----eeEeCCCceEEEcccCCce-EEEEEEeccc-eecceeeEEEccCcceeceEEEeee---EEE
Q 002258 341 EGVKILV--DGHE-----RSITDRDGYYKLDQVTSNR-YTIEAVKVHY-KFNKLKEYMVLPNMASIADIKAISY---DIC 408 (946)
Q Consensus 341 ~ga~V~l--~G~~-----~~~TD~~G~f~~~~L~pG~-Y~I~a~~~~y-~~~~~~~v~v~p~~~~i~dI~~~~~---~v~ 408 (946)
.+-.|.. .+.. .......-.|.+.+|.||+ |.+++.+-.- .......+......+...++.+... ++
T Consensus 125 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~p~~l~~~~~~~~si- 203 (375)
T 3t1w_A 125 IGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTM- 203 (375)
T ss_dssp EEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSCE-
T ss_pred eEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeecCCCCCceeEEEecccCEE-
Confidence 7777765 2211 1233455689999999996 8888765321 1111111111111111223333211 11
Q ss_pred EEEEEcC----CcccEEEEEEeCC--CcccceeeeeCCceEEEEE-EcCee-EEEEEEeeCCCCCCceEEcCCeEEEEE-
Q 002258 409 GVVRTVG----SGNKVKVALTHGP--DKVKPQVKQTDNNGNFCFE-VPPGE-YRLSAMAATPESSSGILFLPPYADVVV- 479 (946)
Q Consensus 409 G~V~~~~----~~~~a~VtL~~~~--~~~~~~~~~Td~~G~F~f~-l~pG~-Y~v~~~~~~~e~~~G~~~~p~~~~V~V- 479 (946)
+|.-.. ......|...... ... .........-.|.+. |.||+ |.+++.+... .|. -.+....+..
T Consensus 204 -~l~W~~p~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~---~g~-s~~~~~~~~t~ 277 (375)
T 3t1w_A 204 -RVTWAPPPSIDLTNFLVRYSPVKNEEDV-AELSISPSDNAVVLTNLLPGTEYVVSVSSVYE---QHE-STPLRGRQKTG 277 (375)
T ss_dssp -EEEEECCSSCCCCEEEEEEEEGGGTTCC-EEEEECTTCCEEEECSCCTTCEEEEEEEEEET---TEE-CCCEEEEEECC
T ss_pred -EEEEcCCCCCCccEEEEEEEeCCCCCCc-EEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcC---CCc-CCceeeEEecC
Confidence 111111 1234555554221 111 122233445789998 99986 8888877432 231 1111111111
Q ss_pred cCcccceEEEEe-eeEEEEEEEeccC--CCCceEEEEEEcCcccccCCcceeEEEeeCCccEEEcccCCcc-EEEEEEee
Q 002258 480 KSPLLNIEFSQA-LVNVLGNVACKER--CGPLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGK-YRLEVKRT 555 (946)
Q Consensus 480 ~~pv~~i~F~q~-~a~V~G~V~~~~~--~~~~~~VtL~~~~~~~~~~~~~~~~~~t~~~G~f~f~~v~PG~-Y~v~v~~~ 555 (946)
..+..++.+... ..+|. |..... ...+-.|.....+.. +......+....-.|.+.+|.||+ |.+++...
T Consensus 278 p~~P~~l~~~~~~~~sv~--l~W~~p~~~~~~Y~v~~~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 351 (375)
T 3t1w_A 278 LDSPTGIDFSDITANSFT--VHWIAPRATITGYRIRHHPEHFS----GRPREDRVPHSRNSITLTNLTPGTEYVVSIVAL 351 (375)
T ss_dssp CCCCEEEEEESCCSSCEE--EEEECCSSCCSEEEEEEEETTCC----SSCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCccEeeeccCCEEE--EEECCCCcceeeEEEEEEECCCC----CcceeEEcCCCccEEEECCCCCCCEEEEEEEEE
Confidence 133344444321 11222 333221 112334555544431 123334445567899999999995 99998854
No 78
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=94.45 E-value=0.036 Score=51.27 Aligned_cols=59 Identities=24% Similarity=0.387 Sum_probs=44.7
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeCC--C--cEEEEEEeCCCceEE----EccccCceEEEEEecCCc
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g--~~v~~ttTd~~G~f~----f~~l~pG~Y~l~~~~~g~ 193 (946)
|+=.|++.. .|.|.+|+.|+|...+ + +.+.+.+||+||+.. -..+.+|.|+|......|
T Consensus 3 lstHVLDt~-------~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 69 (115)
T 1f86_A 3 LMVKVLDAV-------RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 69 (115)
T ss_dssp EEEEEEETT-------TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred eeEEEccCC-------CCCcCCCCEEEEEEcCCCCCcEEEEEeecCCCccccCcCCCCCCcceEEEEEEEhhHh
Confidence 444577652 5899999999998642 3 468999999999983 234678999999976555
No 79
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=94.27 E-value=0.062 Score=56.65 Aligned_cols=68 Identities=21% Similarity=0.216 Sum_probs=47.2
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELV 289 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~ 289 (946)
..+.|+|++ +|+||+||.|.++..+.......... ..+......+...||++|+|.|..+.||.|-+-
T Consensus 104 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~-~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~p 172 (257)
T 3o5u_A 104 MRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSP-ALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEIP 172 (257)
T ss_dssp EEEEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCT-TSCSSCTTEEEECCCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCC-CCCcccCceeEEEeCCCceEEEEEECCCCcCCC
Confidence 357899997 69999999999997653211110000 111112235788999999999999999999763
No 80
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=94.26 E-value=0.026 Score=54.65 Aligned_cols=44 Identities=23% Similarity=0.400 Sum_probs=35.8
Q ss_pred ccccccccCCCceEEecccCCCceeeEeee-----eeEEEEeecceeee
Q 002258 886 GYRNNSVSWAGGSFHFDNLFPGNFYLRPLL-----KLGTAACIQNLCIK 929 (946)
Q Consensus 886 ~yR~n~~t~~~G~~~f~~L~PG~Y~lr~~~-----kEy~f~~~~~~~~~ 929 (946)
.|+.-..+|++|.|.|.+|+||+|||.+.+ .++..+|+-++-.|
T Consensus 86 ~y~r~t~cD~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk 134 (150)
T 3qec_A 86 TYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTK 134 (150)
T ss_dssp GGCEEEECCTTSEEEEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEE
T ss_pred cceeEEEeCCCCcEEECCCCCccEEEEEEEEeccCCCCCcccccceEEE
Confidence 577778999999999999999999997664 35667777776655
No 81
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=94.24 E-value=0.065 Score=54.97 Aligned_cols=68 Identities=18% Similarity=0.167 Sum_probs=45.1
Q ss_pred eEEeEEEee-CCCceeceEEEEEECCCCcccCCCCCC-CccC--ccceeeEEEe-cCCceEEECCcCCeeEEE
Q 002258 221 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSG-NALG--ERKALCHAVS-DADGKFMFKSVPCGQYEL 288 (946)
Q Consensus 221 ~~v~G~V~~-~G~Pi~Ga~V~L~~~~~~~~~c~~g~~-~~~~--~g~~~~~~~T-D~~G~f~f~~Lp~G~Y~v 288 (946)
..|.|+|++ +|+||+||.|.++..+........... ..+. +........| |++|+|+|..+.||.|..
T Consensus 53 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp~ 125 (209)
T 2bum_A 53 IRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPG 125 (209)
T ss_dssp EEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCBC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcccC
Confidence 367899997 699999999999976532111000000 0000 1112466778 999999999999999874
No 82
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=94.16 E-value=0.03 Score=54.22 Aligned_cols=29 Identities=21% Similarity=0.457 Sum_probs=26.0
Q ss_pred cEEEEEEeCCCceEEEccccCceEEEEEe
Q 002258 161 DLISSVITSSEGSYLFKNIIPGKYKLRAS 189 (946)
Q Consensus 161 ~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~ 189 (946)
..+.++++|++|+|.|++|+||+|.|.+.
T Consensus 86 ~y~r~t~cD~~G~F~F~~Lp~G~Yyl~a~ 114 (150)
T 3qec_A 86 TYVREATTDQNGRFDFDHIPNGTYYISSE 114 (150)
T ss_dssp GGCEEEECCTTSEEEEEEECSEEEEEEEE
T ss_pred cceeEEEeCCCCcEEECCCCCccEEEEEE
Confidence 44789999999999999999999999873
No 83
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=94.06 E-value=0.031 Score=52.08 Aligned_cols=59 Identities=17% Similarity=0.294 Sum_probs=46.6
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEE-----EccccCceEEEEEecCCc
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYL-----FKNIIPGKYKLRASHPNL 193 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~-----f~~l~pG~Y~l~~~~~g~ 193 (946)
|+=.|++.. .|.|.+|+.|+|...+.+.+.+.+||+||+.. =..+.+|.|+|......|
T Consensus 11 lstHVLDt~-------~G~PAagv~V~L~~~~~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~tg~Y 74 (121)
T 2h0e_A 11 LTTHILDLT-------CGKPAANVKIGLKRLGESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHAGDY 74 (121)
T ss_dssp EECCEEETT-------TTEECTTCEEEEEETTSCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECHHHH
T ss_pred eeEEEecCC-------CcCCCCCCEEEEEECCceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEEhHHh
Confidence 555677752 58999999999987556678999999999972 235779999999976655
No 84
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=93.90 E-value=0.039 Score=54.38 Aligned_cols=28 Identities=21% Similarity=0.474 Sum_probs=25.6
Q ss_pred EEEEEEeCCCceEEEccccCceEEEEEe
Q 002258 162 LISSVITSSEGSYLFKNIIPGKYKLRAS 189 (946)
Q Consensus 162 ~v~~ttTd~~G~f~f~~l~pG~Y~l~~~ 189 (946)
.+.++++|++|+|.|.+|+||.|.|.+.
T Consensus 107 y~r~t~~D~~G~F~F~~Lp~G~Yyl~a~ 134 (170)
T 1xpn_A 107 YVREATTDQNGRFDFDHIPNGTYYISSE 134 (170)
T ss_dssp HCEEEEECSSCEEEECSCCSEEEEEEEE
T ss_pred ceeEEEecCCCcEEecCCCCccEEEEEE
Confidence 4689999999999999999999999873
No 85
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=93.88 E-value=0.043 Score=50.98 Aligned_cols=59 Identities=19% Similarity=0.367 Sum_probs=44.6
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeCC--C--cEEEEEEeCCCceEE----EccccCceEEEEEecCCc
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~--g--~~v~~ttTd~~G~f~----f~~l~pG~Y~l~~~~~g~ 193 (946)
|+=.|++.. .|.|.+|+.|+|...+ + +.+.+.+||+||+.. =..+.+|.|+|.+....|
T Consensus 4 lstHVLDt~-------~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 70 (119)
T 1oo2_A 4 LMVKILDAV-------KGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEFDTKAY 70 (119)
T ss_dssp EEEEEEETT-------TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEECHHHH
T ss_pred eeEEEecCC-------CcCCCCCCEEEEEEeCCCCCcEEEEEEecCCCCcccCcCCCCCCCceEEEEEEEhHHh
Confidence 444577752 5899999999998642 3 468999999999972 224678999999976555
No 86
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=93.87 E-value=0.058 Score=50.68 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=45.5
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeC--CC--cEEEEEEeCCCceEE----EccccCceEEEEEecCCc
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSH--SG--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 193 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~--~g--~~v~~ttTd~~G~f~----f~~l~pG~Y~l~~~~~g~ 193 (946)
|+=.|++.. .|.|.+|+.|+|... ++ +.+.+.+||+||+.. -..+.+|.|+|.+....|
T Consensus 12 LStHVLDt~-------~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 78 (127)
T 2h4e_A 12 LMVKVLDAV-------RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 78 (127)
T ss_dssp EEEEEEETT-------TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred EEEEEecCC-------CcCCCCCCEEEEEEeCCCCCeEEEEEeecCCCccccCcCCCCCccceEEEEEEEhHHh
Confidence 555688763 589999999999864 33 468999999999983 234678999999976555
No 87
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=93.81 E-value=3.6 Score=49.14 Aligned_cols=213 Identities=14% Similarity=0.116 Sum_probs=103.7
Q ss_pred eEEEEEeCCCcEEE-EEEeCCCceEEEc-----cccCceEEEEEecCC-----c--eEEe----eccEEEEEccCCeeee
Q 002258 151 VNVELLSHSGDLIS-SVITSSEGSYLFK-----NIIPGKYKLRASHPN-----L--SVEV----RGSTEVELGFENGEVD 213 (946)
Q Consensus 151 v~V~L~~~~g~~v~-~ttTd~~G~f~f~-----~l~pG~Y~l~~~~~g-----~--~~~~----~~~~~v~v~~~~~~v~ 213 (946)
++|.+.+++|..+. ...+..+|.|.++ +.+.|.|+|.+...+ + .+.+ .+..+|.+......+.
T Consensus 155 ~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~s~~F~VeeyvlP~feV~i~~~~~~~~ 234 (656)
T 4fxk_A 155 ITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSDGLESNSSTQFEVKKYVLPNFEVKITPGKPYIL 234 (656)
T ss_dssp EEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESSCTTCCCCEEEEECCCCCCSEEEEEEESSSSCC
T ss_pred ceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcCCCceeEEEEEEEEEEecCcEEEEEecCcceee
Confidence 67888999996554 3455678988765 345699999996532 1 1222 2445555543221100
Q ss_pred eeeeccceEEeEEEee---CCCceec-eEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECC---------
Q 002258 214 DIFFAPGYEIRGLVVA---QGNPILG-VHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKS--------- 280 (946)
Q Consensus 214 ~~l~v~g~~v~G~V~~---~G~Pi~G-a~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~--------- 280 (946)
.....+-.+..+|.. -|+|+.| +.+......... ............++.+|...+.-
T Consensus 235 -~~~~~~~~~~v~v~a~Y~~G~PV~G~~~v~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 304 (656)
T 4fxk_A 235 -TVPGHLDEMQLDIQARYIYGKPVQGVAYVRFGLLDEDG---------KKTFFRGLESQTKLVNGQSHISLSKAEFQDAL 304 (656)
T ss_dssp -EETTEECCCEEEEEEEETTCCCCCSEEEEEEEECCTTS---------CCEEEEEEEEEEECSSSEEEEECCHHHHHHHH
T ss_pred -eccCCCCeEEEEEEEEEccCccEeeEEEEEEEEecCCC---------CccccccccccEEeecCEEEEEECHHHhhhhh
Confidence 000112234444543 4999998 555544332100 00000112345677788777641
Q ss_pred ---------cCCeeEEEEEEEc---CCceE------EEecCceEEEEEeccceeeeceeEEEe--eEEEeEEEcCCCCee
Q 002258 281 ---------VPCGQYELVPHYK---GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGV 340 (946)
Q Consensus 281 ---------Lp~G~Y~v~~~~~---~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G~pl 340 (946)
..+..+.+.+.-. +.... +.+.+....+...... ..| .+| +.+.-.+++.+|+|+
T Consensus 305 ~~~~~~~~~~~~~~l~v~a~V~e~~g~~~~~~~~~~i~~~~~~~~i~~~~~~----~~~-kpg~p~~~~v~v~~~dG~P~ 379 (656)
T 4fxk_A 305 EKLNMGITDLQGLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSLDLSKTK----RHL-VPGAPFLLQALVREMSGSPA 379 (656)
T ss_dssp HHTSCCSSTTTTTCEECEEEEECCSSSCCCEEECCCEECCSSSSEEECCSSC----SCC-CTTSBCCEEEEEECSSSSCC
T ss_pred cccccccccccCceEEEEEEEEECCCCeEEEEEEEEEEEecccEEEEEeccC----CeE-cCCCcEEEEEEEECCCCCCC
Confidence 1122455544321 11110 1111112222221110 001 112 344446778899999
Q ss_pred eceEEEEcc--------E----EeeEeCCCceEEEcccCC---ceEEEEEEec
Q 002258 341 EGVKILVDG--------H----ERSITDRDGYYKLDQVTS---NRYTIEAVKV 378 (946)
Q Consensus 341 ~ga~V~l~G--------~----~~~~TD~~G~f~~~~L~p---G~Y~I~a~~~ 378 (946)
++..|.+.- . ....+|.+|.+.+.-..| |.|.+++...
T Consensus 380 ~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~ 432 (656)
T 4fxk_A 380 SGIPVKVSATVSSPGSVPEVQDIQQNTDGSGQVSIPIIIPQTISELQLSVSAG 432 (656)
T ss_dssp CSCCEEEEEEEECGGGCEEEEEEEECCCTTSEEEECCBCCTTCSEEEEEEEES
T ss_pred CCceEEEEEEEeccceEEeeeEEEEEecCCceEEEEEeCCCCCcEEEEEEEeC
Confidence 998887611 1 113678888888753222 5577766543
No 88
>3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii}
Probab=93.72 E-value=0.048 Score=59.04 Aligned_cols=65 Identities=15% Similarity=0.237 Sum_probs=46.9
Q ss_pred CCCCcceEEEEEeCCCc------------EE-----EEEEeCCCceEEEccc-----------------cCceEEEEEec
Q 002258 145 GGGPSNVNVELLSHSGD------------LI-----SSVITSSEGSYLFKNI-----------------IPGKYKLRASH 190 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~------------~v-----~~ttTd~~G~f~f~~l-----------------~pG~Y~l~~~~ 190 (946)
..+|+||.++|++..+. ++ ...+||++|.+.|.+| ++|.|.|.+.+
T Consensus 175 ~~~L~GA~F~L~~~~~~~~~~~~~~~~g~~i~~~~~~~~tTd~~G~~~~~gL~~~d~~~~~~~~~~~~~~~~~Y~l~Etk 254 (290)
T 3qdh_A 175 KAGLQGAQFQLYKAKNAYAGTCTKDKEGDPIAINGETTLTTDAQGAINVKGLFISDSIDGANRDNQKDATARCYVLVETK 254 (290)
T ss_dssp --CCTTCEEEEEEESSTTCSSCCSCEESSCCCBTTBSSEECCTTSEEEEEEEEEEESCCCTTSSCCTTCSEEEEEEEEEE
T ss_pred CcccCCCEEEEEECCCcccceeeccccCceEecCCceEEEECCCCEEEEeCcccccccccccccccccCCCceEEEEEcc
Confidence 47999999999976542 22 3578999999999999 67999999864
Q ss_pred --CCceEEee--ccEEEEEccCC
Q 002258 191 --PNLSVEVR--GSTEVELGFEN 209 (946)
Q Consensus 191 --~g~~~~~~--~~~~v~v~~~~ 209 (946)
.||.+... ...+|+|..+.
T Consensus 255 AP~GY~l~~~~~~~~~~~v~~~~ 277 (290)
T 3qdh_A 255 APAGYVLPAGDGAVTPVKIEVGA 277 (290)
T ss_dssp CCTTBCCCCGGGGEEEEEEEC--
T ss_pred CCCCeEcCcCcCCceeEEEECCC
Confidence 48887622 14677776653
No 89
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=93.62 E-value=2.2 Score=46.16 Aligned_cols=207 Identities=15% Similarity=0.155 Sum_probs=104.0
Q ss_pred CcEEE---cCCCCCccEEEEEEcCCCcccCCceeEEEEcC----CCcCC-CceeeEEEeCcEEEeEEEec--cCCccccC
Q 002258 74 NGYYF---IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDD----TGCNG-NEDINFRFTGFTLLGRVVGA--IGGESCLD 143 (946)
Q Consensus 74 nG~y~---ip~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~----~~~s~-~~dinf~~~g~~IsG~V~~~--~g~~s~~~ 143 (946)
+|.|. .|. .+|.|.|.+.-- |....-.+..+.|.. ..|.. +..+.-...|....=.|... .|+. +
T Consensus 64 dG~y~v~y~p~-~~G~~~i~v~~~-~~~i~gsPf~~~v~~~~d~~~~~~~G~gl~~~~~g~~~~f~V~~~D~~G~~-~-- 138 (311)
T 1wlh_A 64 DGTYDVEFEPK-EAGDYVINLTLD-GDNVNGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVA-R-- 138 (311)
T ss_dssp SSEEEEEECCC-SCSEEEEEEEES-SSBCTTCSEEEEEECCBCTTTCCEESGGGTCEESSSCEEEEEECBBSSSSB-C--
T ss_pred CCEEEEEEEcc-CccceEEEEEEC-CEECCCCceEEEEccccccceeEEeccccceeecCCCEEEEEEecCCCCCE-E--
Confidence 89888 354 799999988853 344333334444432 22211 01111112232222233222 1110 0
Q ss_pred CCCCCcceEEEEEeCCCcEE-EEEEeCCCceEEEccc--cCceEEEEEecCCceEEeecc-EEEEEccCCeeeeeeeecc
Q 002258 144 KGGGPSNVNVELLSHSGDLI-SSVITSSEGSYLFKNI--IPGKYKLRASHPNLSVEVRGS-TEVELGFENGEVDDIFFAP 219 (946)
Q Consensus 144 ~g~plaGv~V~L~~~~g~~v-~~ttTd~~G~f~f~~l--~pG~Y~l~~~~~g~~~~~~~~-~~v~v~~~~~~v~~~l~v~ 219 (946)
..+-..+++.+.+.+|..+ ...+-..+|.|.+.-. .+|.|.|.+...+..+. ++ ..+.|..+... ....+
T Consensus 139 -~~g~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g~~I~--gSPF~v~V~~~~d~--~~v~~- 212 (311)
T 1wlh_A 139 -TDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIK--NMPIDVKCIEGANG--EDSSF- 212 (311)
T ss_dssp -SSCCCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETTEECT--TCSCEEEEECCCCG--GGCEE-
T ss_pred -ecCCCcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECC--CCCEEEEECCCCCC--CceEE-
Confidence 1233457888888777332 3445567898877643 57999999987775432 22 34444322100 00000
Q ss_pred ceEEeEEEe--e-CCCce----eceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCc--CCeeEEEEE
Q 002258 220 GYEIRGLVV--A-QGNPI----LGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV--PCGQYELVP 290 (946)
Q Consensus 220 g~~v~G~V~--~-~G~Pi----~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~L--p~G~Y~v~~ 290 (946)
....=+|. + .|+|+ ....+.+...++ ...+..+...+|.|.+.=. .+|.|.|.+
T Consensus 213 -~~~~f~V~~~D~~gn~~~~G~~~l~v~i~~p~g----------------~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V 275 (311)
T 1wlh_A 213 -GSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAE----------------EITLDAIDNQDGTYTAAYSLVGNGRFSTGV 275 (311)
T ss_dssp -EEEEEEEECBCTTSSBCSSCCSCEEEEEESCCS----------------EEEEEEEECSSSEEEEEEEEECSEEEEEEE
T ss_pred -EeEEEEEEEeccCCCeeecCCCcEEEEEECCCC----------------CceeEEEECCCCEEEEEEECCCCEeEEEEE
Confidence 11111231 2 36554 235555554322 2235666778999766544 489999999
Q ss_pred EEcCCceEEEecCceEEEEEec
Q 002258 291 HYKGENTVFDVSPSLVSMSVRH 312 (946)
Q Consensus 291 ~~~~~~~~~~~~P~~~~vtV~~ 312 (946)
.+.+.+ +..+...+.|..
T Consensus 276 ~~~g~~----I~gsPf~v~v~~ 293 (311)
T 1wlh_A 276 KLNGKH----IEGSPFKQVLGN 293 (311)
T ss_dssp EETTEE----CTTCSEEEEESC
T ss_pred EECCEE----CCCCCEEEEEcC
Confidence 877643 333444555543
No 90
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=93.59 E-value=0.051 Score=53.54 Aligned_cols=29 Identities=28% Similarity=0.602 Sum_probs=26.6
Q ss_pred ceeeEEEecCCceEEECCcCCeeEEEEEE
Q 002258 263 KALCHAVSDADGKFMFKSVPCGQYELVPH 291 (946)
Q Consensus 263 ~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~ 291 (946)
..+..+++|++|+|.|.+||+|+|.|...
T Consensus 106 ~y~r~t~~D~~G~F~F~~Lp~G~Yyl~a~ 134 (170)
T 1xpn_A 106 TYVREATTDQNGRFDFDHIPNGTYYISSE 134 (170)
T ss_dssp HHCEEEEECSSCEEEECSCCSEEEEEEEE
T ss_pred cceeEEEecCCCcEEecCCCCccEEEEEE
Confidence 36789999999999999999999999984
No 91
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=93.51 E-value=0.035 Score=52.75 Aligned_cols=60 Identities=23% Similarity=0.376 Sum_probs=46.3
Q ss_pred EEEeEEEeccCCccccCCCCCCcceEEEEEeCCC-----cEEEEEEeCCCceEE--E--ccccCceEEEEEecCCc
Q 002258 127 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG-----DLISSVITSSEGSYL--F--KNIIPGKYKLRASHPNL 193 (946)
Q Consensus 127 ~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g-----~~v~~ttTd~~G~f~--f--~~l~pG~Y~l~~~~~g~ 193 (946)
.|+=.|++.. .|.|.+||.|+|...++ ..+.+.+||+||+.. + ..+.+|.|+|.+....|
T Consensus 27 ~LTtHVLDt~-------~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 95 (138)
T 3iwv_A 27 PLSTHVLNIA-------QGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKY 95 (138)
T ss_dssp CEECCEEETT-------TTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHHHH
T ss_pred CceEEEeecC-------CccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEehHHH
Confidence 4666788763 58999999999986432 458899999999975 2 24678999999976655
No 92
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=93.17 E-value=0.14 Score=58.28 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=38.9
Q ss_pred CccccceEEEEEeCCCCEEEE--EEeCCCcEEEcCCCCCccEEE-EEEcCCCcccCCceeEEEEcCC
Q 002258 48 RLDYSHVTVELRTLDGLVKES--TQCAPNGYYFIPVYDKGSFVI-KVNGPEGWSWNPDKVAVTVDDT 111 (946)
Q Consensus 48 ~i~~sgv~V~L~~~~G~~~~~--t~t~~nG~y~ip~l~~G~Y~l-~v~~P~G~~~~p~~v~v~vd~~ 111 (946)
.-.|+||+++|++.+|..+.. -+++..+.+ +. |++|+|+| +..+|+||.. .+.+.++|..+
T Consensus 38 ~~~L~GA~f~L~~~~g~~v~e~~w~s~~~~~~-~~-L~~G~YtL~Et~AP~GY~~-a~~I~FtV~~~ 101 (457)
T 2xi9_A 38 SKLLEGATLQLTGDNVNSFQARVFSSNDIGER-IE-LSDGTYTLTELNSPAGYSI-AEPITFKVEAG 101 (457)
T ss_dssp SSCCCCCEEEEC---------CEEECCSSCEE-EE-CCSEEEEEEEEECCTTBCC-CCCEEEEEETT
T ss_pred CCccCCcEEEEEeCCCCeeeeeEEEeCCceeE-Ee-eCCceEEEEEecCCCCcee-ccCEEEEecCC
Confidence 345889999999999887665 233345554 44 59999999 7899999997 46688888653
No 93
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=93.00 E-value=0.096 Score=50.48 Aligned_cols=59 Identities=24% Similarity=0.376 Sum_probs=45.0
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeC--CC--cEEEEEEeCCCceEEE----ccccCceEEEEEecCCc
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSH--SG--DLISSVITSSEGSYLF----KNIIPGKYKLRASHPNL 193 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~--~g--~~v~~ttTd~~G~f~f----~~l~pG~Y~l~~~~~g~ 193 (946)
|+=.|++.. +|.|.+|+.|+|... ++ +.+.+.+||+|||..- ..+.+|.|+|......|
T Consensus 32 LTtHVLDt~-------~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 98 (147)
T 4ank_A 32 LMVKVLDAV-------RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 98 (147)
T ss_dssp EEEEEEETT-------TTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred eEEEEEeCC-------CCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHHH
Confidence 666788753 489999999999753 34 5689999999999752 23467999999976554
No 94
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.00 E-value=3.7 Score=41.24 Aligned_cols=102 Identities=14% Similarity=0.098 Sum_probs=56.5
Q ss_pred eEEECCcCCeeEEEEEEEcCCceEEEecCceEEEEEec-cceeee-------ceeEE-EeeEEEeEEEcCCCCeeeceEE
Q 002258 275 KFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRH-QHVTVP-------EKFQV-TGFSVGGRVVDENDMGVEGVKI 345 (946)
Q Consensus 275 ~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~~vtV~~-~~~~l~-------~~f~~-~g~sV~G~V~d~~G~pl~ga~V 345 (946)
.|.+..+++|.|+|.+......-... ....+.|+|.. ..+.+. ..+.. ....|++...|.+| .|..+.+
T Consensus 52 s~~~~~~~~G~htlta~A~D~aGn~s-~s~~v~vtV~~~~~Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~ 129 (190)
T 3pdd_A 52 TAKITGAAVGAYNLKAVAVLSDGRRI-ESPVTPVLVKVIVKPTVKLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDF 129 (190)
T ss_dssp EEEECSCCSEEEEEEEEEEETTSCEE-ECCCEEEEEECCCCCEEEEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEE
T ss_pred EEEeccCCCccEEEEEEEEECCCCEe-eecceeEEeccCCCCceeecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEE
Confidence 55667788999999875322110000 11224455541 111111 00100 12456667776655 5999999
Q ss_pred EEccEEeeE-eCCCceEEEcccCCceEEEEEEecc
Q 002258 346 LVDGHERSI-TDRDGYYKLDQVTSNRYTIEAVKVH 379 (946)
Q Consensus 346 ~l~G~~~~~-TD~~G~f~~~~L~pG~Y~I~a~~~~ 379 (946)
++||..+.+ +...-.|.+.. .+|.|+|++.+-+
T Consensus 130 ~~dg~~v~t~t~~~y~~~~~~-~~G~~tl~a~A~D 163 (190)
T 3pdd_A 130 LVDGEVIGSDREAPYEYEWKA-VEGNHEISVIAYD 163 (190)
T ss_dssp EETTEEEEEECSSSEEEEEEC-CSEEEEEEEEEEE
T ss_pred EECCEEEecccCCCEEEEEec-CCeeEEEEEEEEE
Confidence 999987753 22333455544 8899999988644
No 95
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=92.68 E-value=0.37 Score=41.51 Aligned_cols=49 Identities=16% Similarity=0.125 Sum_probs=39.5
Q ss_pred CCCCcceEEEE--EeCCC-cEEEEEEeCCCceEEEccccCceEEEEEecCCce
Q 002258 145 GGGPSNVNVEL--LSHSG-DLISSVITSSEGSYLFKNIIPGKYKLRASHPNLS 194 (946)
Q Consensus 145 g~plaGv~V~L--~~~~g-~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~ 194 (946)
|.|++||.|++ ++-.. -.+++..||++|.++|. .--|+-.|.+.+.||-
T Consensus 12 GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~ 63 (82)
T 3e8v_A 12 GQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRF 63 (82)
T ss_dssp SCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEE
T ss_pred CCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEE
Confidence 79999987765 44322 34778999999999999 7788999999999874
No 96
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=92.67 E-value=1.4 Score=44.93 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=79.5
Q ss_pred cceEEEEEeCCCCEEEEEEeCC-CcEEE--cCCCCCccEEEEEEcCCCcccCCceeEEEEcCCC-cCCCceeeEEEeCcE
Q 002258 52 SHVTVELRTLDGLVKESTQCAP-NGYYF--IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTG-CNGNEDINFRFTGFT 127 (946)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t~~-nG~y~--ip~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~~~-~s~~~dinf~~~g~~ 127 (946)
..++|.+..++|..+.-...+. ||.|. +-...+|.|.|.+.--. ....-.+..+.|.... ++. ..+...-|.
T Consensus 44 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g-~~i~gSPf~v~v~~~~~~~~---~~~~~~~f~ 119 (212)
T 1qfh_A 44 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG-NPIKNMPIDVKCIEGANGED---SSFGSFTFT 119 (212)
T ss_dssp CCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT-EECBTCSEEEEEECCCCGGG---CEEEEEEEE
T ss_pred CeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC-EecCCCcceEEEccCCCCCc---eEEEEEEEE
Confidence 3678888888886555555554 89998 33348999999988532 3333233455554421 111 111111122
Q ss_pred EEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEc--cccCceEEEEEecCCceEE
Q 002258 128 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVE 196 (946)
Q Consensus 128 IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~~ 196 (946)
|. ..+..|+ . ...+....++++...+|......+...||.|.+. ...+|.|.|.+...+..+.
T Consensus 120 V~--~~D~~G~-~---~~~G~~~l~v~i~~p~g~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~~I~ 184 (212)
T 1qfh_A 120 VA--AKNKKGE-V---KTYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIE 184 (212)
T ss_dssp EE--CBCTTSS-B---CSSCCCCEEEEEEECCSEEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTEECB
T ss_pred EE--EeccCCC-E---eecCCCcEEEEEECCCCceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCEECC
Confidence 21 1122121 0 1245667888998888843445667889977655 4468999999988776543
No 97
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=92.59 E-value=12 Score=44.61 Aligned_cols=209 Identities=14% Similarity=0.128 Sum_probs=109.3
Q ss_pred ceEEEEEeCCCCEEEEEEeCC--CcEEEcCCC-CCccEEEEEEcCCCc-----cc-----CCceeEEEEcCCCcCCCcee
Q 002258 53 HVTVELRTLDGLVKESTQCAP--NGYYFIPVY-DKGSFVIKVNGPEGW-----SW-----NPDKVAVTVDDTGCNGNEDI 119 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~~--nG~y~ip~l-~~G~Y~l~v~~P~G~-----~~-----~p~~v~v~vd~~~~s~~~di 119 (946)
-+++.|+|++|..+.+....+ .+.|.+|-- ..|.|+|++....+- .| .|...+++++...
T Consensus 138 ~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~~~F~Veeyv~P~feV~~~~~~------- 210 (627)
T 3hrz_A 138 TVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSE------- 210 (627)
T ss_dssp CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETTCSCCEEEEEEECCCCCCSEEEEEEESS-------
T ss_pred cEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECCCceEEEEEEEEeEEECCcEEEEEecCc-------
Confidence 478999999999888754444 466776553 469999998864321 12 2333334433210
Q ss_pred eEE-Ee-CcEEEeEEEeccCCccccCCCCCCcc-eEEEE--EeCCCc------EEEEEEeCCCceEEEccc---------
Q 002258 120 NFR-FT-GFTLLGRVVGAIGGESCLDKGGGPSN-VNVEL--LSHSGD------LISSVITSSEGSYLFKNI--------- 179 (946)
Q Consensus 120 nf~-~~-g~~IsG~V~~~~g~~s~~~~g~plaG-v~V~L--~~~~g~------~v~~ttTd~~G~f~f~~l--------- 179 (946)
.+. +. +-.+..+|.... --|+|+.| |+|.+ ...+.. .-.....|..|.|.|.--
T Consensus 211 ~~~~~~~~~~~~~~v~a~y------~~G~Pv~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~G~g~~~l~~~~~~~~~~~~ 284 (627)
T 3hrz_A 211 KFFYIDGNENFHVSITARY------LYGEEVEGVAFVLFGVKIDDAKKSIPDSLTRIPIIDGDGKATLKRDTFRSRFPNL 284 (627)
T ss_dssp SEEETTCCCCEEEEEEEEE------TTSCBCCEEEEEEEEEEETTEEEECGGGCEEEEEBTTEEEEEECHHHHHHHCCCG
T ss_pred ceEEecCCCEEEEEEEEEE------CCCCEeccEEEEEEEEccCCceeeccchheeEEecCCeEEEEEEHHHhhhhhcch
Confidence 111 12 323333442221 02688888 44443 121111 112344677778876521
Q ss_pred ---cCceEEEEEe---cCCceEEeeccEEEEEccCCeee----eeeeeccceEEeEEEe--e-CCCceeceEEEEEECCC
Q 002258 180 ---IPGKYKLRAS---HPNLSVEVRGSTEVELGFENGEV----DDIFFAPGYEIRGLVV--A-QGNPILGVHIYLYSDDV 246 (946)
Q Consensus 180 ---~pG~Y~l~~~---~~g~~~~~~~~~~v~v~~~~~~v----~~~l~v~g~~v~G~V~--~-~G~Pi~Ga~V~L~~~~~ 246 (946)
....+.|.+. ..|-.........+.+......+ .+.+..+|....|+|. + +|.|++++.|.+...
T Consensus 285 ~~~~~~~l~v~a~V~~e~gt~~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dg~P~~~~~V~v~~~-- 362 (627)
T 3hrz_A 285 NELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPYQIHFTKTPKYFKPGMPYELTVYVTNPDGSPAAHVPVVSEAF-- 362 (627)
T ss_dssp GGGTTCEEEEEEEEEETTSSCEEEEEEEEEEEESSSCEEECTTSCSEECTTSCEEEEEEEECTTSCBCTTCEEEEGGG--
T ss_pred hhhcCcEEEEEEEEEEecCCeEEEcccceEEEEeecEEEEEEeccccccCCCcEEEEEEEECCCCCcCCCceEEEEcC--
Confidence 1123445442 22322221222334444433332 1234456766666655 3 699999999877432
Q ss_pred CcccCCCCCCCccCccceeeEEEecCCceEEECC-cCC--eeEEEEEEEcC
Q 002258 247 GKVDCPQGSGNALGERKALCHAVSDADGKFMFKS-VPC--GQYELVPHYKG 294 (946)
Q Consensus 247 ~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~-Lp~--G~Y~v~~~~~~ 294 (946)
-...+||++|...|.= .+. +.+.|.+.+..
T Consensus 363 ------------------~~~~~td~~G~a~f~i~t~~~~~~l~i~~~~~~ 395 (627)
T 3hrz_A 363 ------------------HSMGTTLSDGTAKLILNIPLNAQSLPITVRTNH 395 (627)
T ss_dssp ------------------TEEEECCTTSEEEEEECCCTTCSEEEEEEEECC
T ss_pred ------------------cceeEECCCCeEEEEEECCCCCcEEEEEEEeCC
Confidence 1467899999877752 222 46777776543
No 98
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=92.39 E-value=0.1 Score=59.74 Aligned_cols=65 Identities=14% Similarity=0.176 Sum_probs=49.2
Q ss_pred CCCCcceEEEEEeCCCcE-------------EEEEEeCCCceEEEccc--------------------cCceEEEEEec-
Q 002258 145 GGGPSNVNVELLSHSGDL-------------ISSVITSSEGSYLFKNI--------------------IPGKYKLRASH- 190 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~~-------------v~~ttTd~~G~f~f~~l--------------------~pG~Y~l~~~~- 190 (946)
+.+|+||.++|++.++.. ....+||++|.+.|.+| .+|.|.|.+.+
T Consensus 320 ~~~L~GA~F~L~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~gL~~~~~~~~~~~~~~~~~~~~~~g~Y~lvETkA 399 (436)
T 3hr6_A 320 PGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETAT 399 (436)
T ss_dssp CCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEETTTTSCSEEEEEEEEC
T ss_pred CcccCCCEEEEEECCCCccccccCCceeeccceEEEeCCCcEEEEeCccccccccccccccccccccCCCCeEEEEEecC
Confidence 579999999999765421 13578999999999999 57999999864
Q ss_pred -CCceEEeeccEEEEEccCCe
Q 002258 191 -PNLSVEVRGSTEVELGFENG 210 (946)
Q Consensus 191 -~g~~~~~~~~~~v~v~~~~~ 210 (946)
.||.+. ...+.|+|..++.
T Consensus 400 P~GY~l~-~~pi~fti~~~~~ 419 (436)
T 3hr6_A 400 ASGYELL-PKPVIVKLEANES 419 (436)
T ss_dssp CTTCBCC-SSCEEECCCCCTT
T ss_pred CCCcCcC-CCcEEEEEecCCc
Confidence 488876 3336777765544
No 99
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=92.21 E-value=0.27 Score=45.28 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=41.3
Q ss_pred EeEEEee--CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEE----ECCcCCeeEEEEEE
Q 002258 223 IRGLVVA--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM----FKSVPCGQYELVPH 291 (946)
Q Consensus 223 v~G~V~~--~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~----f~~Lp~G~Y~v~~~ 291 (946)
|+=.|.+ .|.|.+|+.|.|+..++. ....+...+||+||+.. =..+.+|.|+|++.
T Consensus 6 lstHVLDt~~G~PAagv~V~L~~~~~~-------------~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~ 67 (114)
T 2g2n_A 6 LSVHILNQQTGKPAADVTVTLEKKADN-------------GWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFK 67 (114)
T ss_dssp EEEEEEETTTTEECCSCEEEEEEECSS-------------SEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEEC
T ss_pred eEEEEecCCCcCCCCCCEEEEEEeCCC-------------CcEEEEEEecCCCCccccccCCCCCCceEEEEEEE
Confidence 4556775 499999999999986421 12357899999999972 12466899999984
No 100
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=92.16 E-value=0.11 Score=47.83 Aligned_cols=54 Identities=19% Similarity=0.353 Sum_probs=42.7
Q ss_pred EEEeEEEcC-CCCeeeceEEEEc--cEEe--eEeCCCceEEE---cccCCceEEEEEEeccc
Q 002258 327 SVGGRVVDE-NDMGVEGVKILVD--GHER--SITDRDGYYKL---DQVTSNRYTIEAVKVHY 380 (946)
Q Consensus 327 sV~G~V~d~-~G~pl~ga~V~l~--G~~~--~~TD~~G~f~~---~~L~pG~Y~I~a~~~~y 380 (946)
.|+-.|+|. .|.|.+|+.|.|. .+.+ ++||+||+... +.+.+|.|.|.+....|
T Consensus 11 ~lstHVLDt~~G~PAagv~V~L~~~~~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Y 72 (116)
T 3qva_A 11 TLSTHILDISTGTPAEGVTVSLSREGETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAW 72 (116)
T ss_dssp CEEEEEEETTTTEECTTCEEEEEETTEEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHH
T ss_pred CeeeEEeecCCCcCCCCCEEEEEEccEeEEEeccCCCCCccccccccCCCceEEEEEeHHHH
Confidence 467789997 8999999999992 2433 58999999853 34678999999987776
No 101
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=91.65 E-value=0.3 Score=45.12 Aligned_cols=57 Identities=12% Similarity=0.273 Sum_probs=41.2
Q ss_pred EeEEEee--CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEE----ECCcCCeeEEEEEE
Q 002258 223 IRGLVVA--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM----FKSVPCGQYELVPH 291 (946)
Q Consensus 223 v~G~V~~--~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~----f~~Lp~G~Y~v~~~ 291 (946)
|+=.|.+ .|.|.+|+.|.|+..++. .....+...+||+|||.. -..+.+|.|+|++.
T Consensus 3 lstHVLDt~~G~PAagv~V~L~~~~~~------------~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~ 65 (115)
T 1f86_A 3 LMVKVLDAVRGSPAINVAVHVFRKAAD------------DTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEID 65 (115)
T ss_dssp EEEEEEETTTTEECTTCEEEEEEECTT------------SCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEEC
T ss_pred eeEEEccCCCCCcCCCCEEEEEEcCCC------------CCcEEEEEeecCCCccccCcCCCCCCcceEEEEEEE
Confidence 3445665 499999999999985310 012357899999999983 23467899999984
No 102
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=91.25 E-value=0.7 Score=49.07 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=41.3
Q ss_pred EeeCCC---ceeceE--EEEEECCCCcccCCCCCCCccCccceeeEEE-ecCCceEEECCc-CCeeEEEEEEEcCCceEE
Q 002258 227 VVAQGN---PILGVH--IYLYSDDVGKVDCPQGSGNALGERKALCHAV-SDADGKFMFKSV-PCGQYELVPHYKGENTVF 299 (946)
Q Consensus 227 V~~~G~---Pi~Ga~--V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~-TD~~G~f~f~~L-p~G~Y~v~~~~~~~~~~~ 299 (946)
+..+|. +|+||. |.|+...+. ..+.... ||++|.|.|.+| .+|+|+|.+... .++..
T Consensus 164 ~d~~~~~~~~L~GA~~~F~l~~~~~~---------------~~~~~~~~t~~~g~~~~~gLd~~g~Y~l~Et~a-~GY~~ 227 (262)
T 2x9z_A 164 TWVDATGAPIPAGAEATFDLVNAQAG---------------KVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSI-KGYSA 227 (262)
T ss_dssp EEECTTSCBCCCCSCEEEEEEETTTC---------------CEEEEEEECTTCSEEEECSCCTTSCEEEEECCB-TTBEE
T ss_pred EcCCCCcccCcCCcEEEEEEEECCCC---------------cEEEEEEecCCceEEEEeCCCCCCCEEEEEEEe-CCccc
Confidence 334454 899976 999987431 1223333 899999999999 799999999765 55543
Q ss_pred E
Q 002258 300 D 300 (946)
Q Consensus 300 ~ 300 (946)
.
T Consensus 228 ~ 228 (262)
T 2x9z_A 228 D 228 (262)
T ss_dssp E
T ss_pred c
Confidence 3
No 103
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=91.03 E-value=0.64 Score=49.74 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=43.8
Q ss_pred CCCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCCceEE
Q 002258 145 GGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVE 196 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g~~~~ 196 (946)
..-++++.|.|. ..|..+..+.||+.|.|.|..|++|.|+|.+.+.|| ..
T Consensus 207 ~~~~~~~~vpl~-~~~~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g~-p~ 256 (274)
T 1ti6_B 207 GDCFEGAKVVLK-SGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGK-SY 256 (274)
T ss_dssp TEECTTCEEEEE-ETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTE-EE
T ss_pred cccccCCEEEEE-cCCcEEEEEeecCcCcEEEeccCCcceEEEEecCCC-Cc
Confidence 456777888888 447778899999999999999999999999999999 55
No 104
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=90.97 E-value=0.7 Score=43.34 Aligned_cols=57 Identities=12% Similarity=0.273 Sum_probs=41.7
Q ss_pred EeEEEee--CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEE----ECCcCCeeEEEEEE
Q 002258 223 IRGLVVA--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM----FKSVPCGQYELVPH 291 (946)
Q Consensus 223 v~G~V~~--~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~----f~~Lp~G~Y~v~~~ 291 (946)
|+=.|.+ .|.|.+|+.|.|+..+.. .....+...+||+|||.. -..+.+|.|+|++.
T Consensus 12 LStHVLDt~~G~PAagv~V~L~~~~~~------------~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~ 74 (127)
T 2h4e_A 12 LMVKVLDAVRGSPAINVAVHVFRKAAD------------DTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEID 74 (127)
T ss_dssp EEEEEEETTTTEECTTCEEEEEEECTT------------SCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEEC
T ss_pred EEEEEecCCCcCCCCCCEEEEEEeCCC------------CCeEEEEEeecCCCccccCcCCCCCccceEEEEEEE
Confidence 4556776 499999999999975210 012357899999999983 23467899999984
No 105
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=90.74 E-value=0.58 Score=43.40 Aligned_cols=57 Identities=19% Similarity=0.345 Sum_probs=41.1
Q ss_pred EeEEEee--CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEE----ECCcCCeeEEEEEE
Q 002258 223 IRGLVVA--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM----FKSVPCGQYELVPH 291 (946)
Q Consensus 223 v~G~V~~--~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~----f~~Lp~G~Y~v~~~ 291 (946)
|+=.|.+ .|.|.+|+.|.|+..++. .....+...+||+|||.. =..+.+|.|+|++.
T Consensus 4 lstHVLDt~~G~PAagv~V~L~~~~~~------------~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~ 66 (119)
T 1oo2_A 4 LMVKILDAVKGTPAGSVALKVSQKTAD------------GGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEFD 66 (119)
T ss_dssp EEEEEEETTTTEECTTCEEEEEEECTT------------SCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEEC
T ss_pred eeEEEecCCCcCCCCCCEEEEEEeCCC------------CCcEEEEEEecCCCCcccCcCCCCCCCceEEEEEEE
Confidence 4445665 499999999999975210 012357899999999973 22467899999984
No 106
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=90.58 E-value=17 Score=37.42 Aligned_cols=184 Identities=11% Similarity=0.147 Sum_probs=86.1
Q ss_pred CCCceEEEcccCCce-EEEEEEeccc-eecceeeEEEccCcceeceEEEeee---EEEEEEEEc---CCcccEEEEEEeC
Q 002258 356 DRDGYYKLDQVTSNR-YTIEAVKVHY-KFNKLKEYMVLPNMASIADIKAISY---DICGVVRTV---GSGNKVKVALTHG 427 (946)
Q Consensus 356 D~~G~f~~~~L~pG~-Y~I~a~~~~y-~~~~~~~v~v~p~~~~i~dI~~~~~---~v~G~V~~~---~~~~~a~VtL~~~ 427 (946)
...-.|.+.+|.||+ |.+++.+-.- .........+........++.+... +| +|.-. .......|.....
T Consensus 65 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~~sv--~l~W~~p~~~i~~Y~v~~~~~ 142 (283)
T 1tdq_A 65 PPLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRVGSRTATSL--DLEWDNSEAEAQEYKVVYSTL 142 (283)
T ss_dssp TTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEECSSCE--EEEEECCSSCCSEEEEEEEET
T ss_pred CCCCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCCceEEEecCCCeE--EEEecCCCCCccEEEEEEEeC
Confidence 345579999999997 9888765331 1111111111110011123332211 11 12211 1234556666543
Q ss_pred CCcccceeeeeCC---ceEEEEE-EcCee-EEEEEEeeCCCCCCceEEcCCeEEEEE-c--CcccceEEEEee-eEEEEE
Q 002258 428 PDKVKPQVKQTDN---NGNFCFE-VPPGE-YRLSAMAATPESSSGILFLPPYADVVV-K--SPLLNIEFSQAL-VNVLGN 498 (946)
Q Consensus 428 ~~~~~~~~~~Td~---~G~F~f~-l~pG~-Y~v~~~~~~~e~~~G~~~~p~~~~V~V-~--~pv~~i~F~q~~-a~V~G~ 498 (946)
.+........... .-.|.+. |.||+ |.+++.+... .|. . ....+.. . .+..++...... .+|.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~---~g~--s-~~~~~~~~t~~~~P~~l~~~~~~~~sv~-- 214 (283)
T 1tdq_A 143 AGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMN---SKQ--S-IPATMNARTELDSPRDLMVTASSETSIS-- 214 (283)
T ss_dssp TCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEET---TEE--C-CCEEEEEECCCCCCEEEEEEEECSSCEE--
T ss_pred CCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeC---CCC--C-cceEEEecCCCCCCCccEEeEecCCEEE--
Confidence 2221111222233 6788898 99998 9998887532 231 1 2222333 1 223344433211 1122
Q ss_pred EEeccCCC--CceEEEEEEcCcccccCCcceeEEEeeCCccEEEcccCCcc-EEEEEEee
Q 002258 499 VACKERCG--PLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGK-YRLEVKRT 555 (946)
Q Consensus 499 V~~~~~~~--~~~~VtL~~~~~~~~~~~~~~~~~~t~~~G~f~f~~v~PG~-Y~v~v~~~ 555 (946)
|......+ .+-.|.....++ ......+....-.|.+.+|.||. |.+++...
T Consensus 215 l~W~~p~~~i~~Y~v~~~~~~~------~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 268 (283)
T 1tdq_A 215 LIWTKASGPIDHYRITFTPSSG------ISSEVTVPRDRTSYTLTDLEPGAEYIISITAE 268 (283)
T ss_dssp EEEECCCSCCSEEEEEEECSSS------CCEEEEEESSCSEEEECCCCTTCCEEEEEEEE
T ss_pred EEEeCCCCcccEEEEEEEcCCC------CeeEEEeCCCccEEEECCCCCCCEEEEEEEEE
Confidence 22322111 122333332222 22333445566789999999998 99998853
No 107
>3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris}
Probab=90.44 E-value=0.21 Score=57.83 Aligned_cols=84 Identities=11% Similarity=0.050 Sum_probs=54.3
Q ss_pred CCCceeceEEEEEECCCC-----cccCCCCCCC-ccCccceeeEEEecCCceEEECCcC---------------CeeEEE
Q 002258 230 QGNPILGVHIYLYSDDVG-----KVDCPQGSGN-ALGERKALCHAVSDADGKFMFKSVP---------------CGQYEL 288 (946)
Q Consensus 230 ~G~Pi~Ga~V~L~~~~~~-----~~~c~~g~~~-~~~~g~~~~~~~TD~~G~f~f~~Lp---------------~G~Y~v 288 (946)
.+.+|+||.|.|++.++. .+.|.+.... .+..-......+||++|.+.|.+|+ +|+|+|
T Consensus 368 ~~~~LaGAeF~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~i~gL~~~d~~~~~~~~~~~~~~~Y~l 447 (488)
T 3uxf_A 368 DKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYVNGAKKDQLTDEDYYCL 447 (488)
T ss_dssp CGGGGTTCEEEEEEEEEETTEEEECCSCTTSSSCCCCCBTTBSCEECBTTTEEEEEEEECTTEETTEECCSCCTTSEEEE
T ss_pred CCcccCCCEEEEEeccCCcccceeeecccccccccceecCCceEEEECCCCEEEEcCeEeecccccccccccCCCCcEEE
Confidence 357999999999987642 1223321100 0000001235799999999999999 679999
Q ss_pred EEEEcCCceEEEecCceEEEEEeccce
Q 002258 289 VPHYKGENTVFDVSPSLVSMSVRHQHV 315 (946)
Q Consensus 289 ~~~~~~~~~~~~~~P~~~~vtV~~~~~ 315 (946)
++.....++ .+.+..+.|+|..++.
T Consensus 448 ~EtkAP~GY--~l~~~pi~f~v~~~~~ 472 (488)
T 3uxf_A 448 VETKAPEGY--NLQADPLPFRVLAEKA 472 (488)
T ss_dssp EEEECCTTB--CCCSSCEEECCCHHHH
T ss_pred EEeeCCCCc--ccCCCcEEEEEecCcc
Confidence 998766654 3445667788876543
No 108
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=90.35 E-value=11 Score=37.45 Aligned_cols=133 Identities=15% Similarity=0.183 Sum_probs=75.2
Q ss_pred cccceEEEEEeCCCCEEEEEEe-CCCcEEE---cCCCCCccEEEEEEcCCCcccCCceeEEEEcC---CCcCC-CceeeE
Q 002258 50 DYSHVTVELRTLDGLVKESTQC-APNGYYF---IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDD---TGCNG-NEDINF 121 (946)
Q Consensus 50 ~~sgv~V~L~~~~G~~~~~t~t-~~nG~y~---ip~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~---~~~s~-~~dinf 121 (946)
.-..+++++.+++|....-..+ ..+|.|. .|- .+|.|.|.+.--. ....-.+..+.|.. ..|.. +..+.-
T Consensus 32 ~~~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~-~~G~h~i~V~~~g-~~i~gSPf~~~V~~~d~~~~~~~G~GL~~ 109 (188)
T 2k7p_A 32 KKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPS-EAGLHEMDIRYDN-MHIPGSPLQFYVDYVNCGHVTAYGPGLTH 109 (188)
T ss_dssp CSSCEEEEEECTTSCEECCEEEECSSSEEEEEECCC-CCEEEEEEEEETT-EECTTCSEEEEECCTTSSSCEEESSTTTE
T ss_pred cCceEEEEEECCCCCccccEEEeCCCCEEEEEEEcc-ccEeEEEEEEECC-EecCCCCEEEEecccCCcceEEeCccccc
Confidence 3457889999999987665555 4489988 354 8999999888532 22222223344432 12210 000111
Q ss_pred EEeCcEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEcc--ccCceEEEEEecCCce
Q 002258 122 RFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKN--IIPGKYKLRASHPNLS 194 (946)
Q Consensus 122 ~~~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~--l~pG~Y~l~~~~~g~~ 194 (946)
...|....=.|... +++..+.+|++...++..+ ...-..||.|.+.- -.||.|.|.+...+..
T Consensus 110 ~~vg~~~~F~V~t~---------dag~g~l~v~I~gp~~~~~-~~~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~ 174 (188)
T 2k7p_A 110 GVVNKPATFTVNTK---------DAGEGGLSLAIEGPSKAEI-SCTDNQDGTCSVSYLPVLPGDYSILVKYNEQH 174 (188)
T ss_dssp EETTSCEEEEEECT---------TCCSSCEEEEEECSSCCEE-EEEECTTSEEEEEEECCSSEEEEEEEEETTEE
T ss_pred ceeCccEEEEEEeC---------CCCCCCeEEEEeCCCCCeE-EEEECCCCEEEEEEEeCCCEEEEEEEEECCEE
Confidence 11222212122222 2445667777776665433 35667889766553 3579999988776644
No 109
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=90.20 E-value=2.6 Score=56.33 Aligned_cols=42 Identities=24% Similarity=0.288 Sum_probs=29.8
Q ss_pred ceEEEEEeCCCCEEEEEEeC---CCcEEE----cCC-CCCccEEEEEEcC
Q 002258 53 HVTVELRTLDGLVKESTQCA---PNGYYF----IPV-YDKGSFVIKVNGP 94 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~---~nG~y~----ip~-l~~G~Y~l~v~~P 94 (946)
-++|+|+|++|..+.+.... .+|.|. +|- ...|.|.|++...
T Consensus 161 ~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 161 TVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp CEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred eEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 47899999999888775433 566543 433 2569999998753
No 110
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=90.06 E-value=0.47 Score=50.46 Aligned_cols=51 Identities=14% Similarity=0.296 Sum_probs=40.6
Q ss_pred CCCcceE--EEEEeCCC-cEEEEEE-eCCCceEEEccc-cCceEEEEEec-CCceEE
Q 002258 146 GGPSNVN--VELLSHSG-DLISSVI-TSSEGSYLFKNI-IPGKYKLRASH-PNLSVE 196 (946)
Q Consensus 146 ~plaGv~--V~L~~~~g-~~v~~tt-Td~~G~f~f~~l-~pG~Y~l~~~~-~g~~~~ 196 (946)
.+|+||. ++|++.++ ..+..+. |+++|.+.|.+| .+|+|.|.+.+ .||.+.
T Consensus 172 ~~L~GA~~~F~l~~~~~~~~~~~~~~t~~~g~~~~~gLd~~g~Y~l~Et~a~GY~~~ 228 (262)
T 2x9z_A 172 PIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSAD 228 (262)
T ss_dssp BCCCCSCEEEEEEETTTCCEEEEEEECTTCSEEEECSCCTTSCEEEEECCBTTBEEE
T ss_pred cCcCCcEEEEEEEECCCCcEEEEEEecCCceEEEEeCCCCCCCEEEEEEEeCCcccc
Confidence 4899966 99998765 4444444 899999999999 79999999843 788765
No 111
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=89.93 E-value=5.9 Score=52.97 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=30.6
Q ss_pred ceEEEEEeCCCCEEEEEEeC-CCcEEE-----cC-CCCCccEEEEEEcC
Q 002258 53 HVTVELRTLDGLVKESTQCA-PNGYYF-----IP-VYDKGSFVIKVNGP 94 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~-~nG~y~-----ip-~l~~G~Y~l~v~~P 94 (946)
-++|+|+|++|..+.+-... .+|.|. +| ....|.|.|++...
T Consensus 158 ~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~ 206 (1676)
T 3cu7_A 158 ETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYK 206 (1676)
T ss_dssp CEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBS
T ss_pred ceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEec
Confidence 58899999999887765443 477765 33 33579999998863
No 112
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=89.58 E-value=0.34 Score=46.03 Aligned_cols=58 Identities=21% Similarity=0.264 Sum_probs=42.4
Q ss_pred EeEEEee--CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEE--E--CCcCCeeEEEEEE
Q 002258 223 IRGLVVA--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM--F--KSVPCGQYELVPH 291 (946)
Q Consensus 223 v~G~V~~--~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~--f--~~Lp~G~Y~v~~~ 291 (946)
|+-.|.+ .|.|.+|+.|.|+..++. ......+...+||+||+.. + ..+.+|.|+|.+.
T Consensus 28 LTtHVLDt~~G~PAagv~V~L~~~~~~-----------~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~ 91 (138)
T 3iwv_A 28 LSTHVLNIAQGVPGANMTIVLHRLDPV-----------SSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFE 91 (138)
T ss_dssp EECCEEETTTTEECTTCEEEEEEECSS-----------SCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEEC
T ss_pred ceEEEeecCCccCCCCCEEEEEEECCC-----------CCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEe
Confidence 5556776 499999999999986420 0112347889999999985 2 2478899999984
No 113
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=89.42 E-value=6.6 Score=42.33 Aligned_cols=135 Identities=17% Similarity=0.225 Sum_probs=74.6
Q ss_pred cceEEEEEeCCCCEEEEEEeC-CCcEEE--cCCCCCccEEEEEEcCCCcccCCceeEEEEcCCCcCCCceeeEEEeCcEE
Q 002258 52 SHVTVELRTLDGLVKESTQCA-PNGYYF--IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRFTGFTL 128 (946)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t~-~nG~y~--ip~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~~~~s~~~dinf~~~g~~I 128 (946)
..+++++..++|..+....++ .||.|. +-...+|.|.|.+.--. -...-.+..+.|.... ... .+.....-|.|
T Consensus 143 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g-~~I~gSPF~v~V~~~~-d~~-~v~~~~~~f~V 219 (311)
T 1wlh_A 143 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG-NPIKNMPIDVKCIEGA-NGE-DSSFGSFTFTV 219 (311)
T ss_dssp CCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETT-EECTTCSCEEEEECCC-CGG-GCEEEEEEEEE
T ss_pred CcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECC-EECCCCCEEEEECCCC-CCC-ceEEEeEEEEE
Confidence 357888888888544444443 489988 44448999999888532 2222223445553321 100 11111111111
Q ss_pred EeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEc--cccCceEEEEEecCCceE
Q 002258 129 LGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSV 195 (946)
Q Consensus 129 sG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~ 195 (946)
+..+..|+- + -.+.....|.+...+|.+....+...+|.|.+. ...+|.|.|.+...+..+
T Consensus 220 --~~~D~~gn~-~---~~G~~~l~v~i~~p~g~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~~I 282 (311)
T 1wlh_A 220 --AAKNKKGEV-K---TYGGDKFEVSITGPAEEITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHI 282 (311)
T ss_dssp --ECBCTTSSB-C---SSCCSCEEEEEESCCSEEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTEEC
T ss_pred --EEeccCCCe-e---ecCCCcEEEEEECCCCCceeEEEECCCCEEEEEEECCCCEeEEEEEEECCEEC
Confidence 111221100 0 034456888888887844445567789997554 446899999998777654
No 114
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=89.40 E-value=0.32 Score=46.89 Aligned_cols=53 Identities=19% Similarity=0.210 Sum_probs=41.5
Q ss_pred EEeEEEcC-CCCeeeceEEEE-----ccE--Ee--eEeCCCceEEE----cccCCceEEEEEEeccc
Q 002258 328 VGGRVVDE-NDMGVEGVKILV-----DGH--ER--SITDRDGYYKL----DQVTSNRYTIEAVKVHY 380 (946)
Q Consensus 328 V~G~V~d~-~G~pl~ga~V~l-----~G~--~~--~~TD~~G~f~~----~~L~pG~Y~I~a~~~~y 380 (946)
|+=.|+|. .|.|.+|+.|.| +|+ .+ ++||+||+..- +.+.+|.|.|.+....|
T Consensus 32 LTtHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 98 (147)
T 4ank_A 32 LMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 98 (147)
T ss_dssp EEEEEEETTTTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred eEEEEEeCCCCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHHH
Confidence 66789997 899999999998 332 22 58999999742 24568999999987776
No 115
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=89.39 E-value=20 Score=47.52 Aligned_cols=209 Identities=14% Similarity=0.119 Sum_probs=108.6
Q ss_pred ceEEEEEeCCCCEEEEEEeCC--CcEEEcCCC-CCccEEEEEEcCCCc-----cc-----CCceeEEEEcCCCcCCCcee
Q 002258 53 HVTVELRTLDGLVKESTQCAP--NGYYFIPVY-DKGSFVIKVNGPEGW-----SW-----NPDKVAVTVDDTGCNGNEDI 119 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~~--nG~y~ip~l-~~G~Y~l~v~~P~G~-----~~-----~p~~v~v~vd~~~~s~~~di 119 (946)
-++|.|.|++|..+.+....+ .+.|.+|-. ..|.|+|++....+- .| -+...+|.++... .
T Consensus 160 ~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~~~~~~~~~~F~VeeYvlP~FeV~v~~~~-----~- 233 (1642)
T 3prx_B 160 TVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSE-----K- 233 (1642)
T ss_dssp CEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEETTEEEEEEEEEEECSCCCCSEEEEEEESS-----S-
T ss_pred eEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeCCCCcEEEEEEEEEEEecCcEEEEEeccc-----e-
Confidence 467889999999888865444 567776543 569999998765321 11 1222333333210 0
Q ss_pred eEEEe-CcEEEeEEEeccCCccccCCCCCCcce-EEE--EEeCCCc------EEEEEEeCCCceEEEccc--c-------
Q 002258 120 NFRFT-GFTLLGRVVGAIGGESCLDKGGGPSNV-NVE--LLSHSGD------LISSVITSSEGSYLFKNI--I------- 180 (946)
Q Consensus 120 nf~~~-g~~IsG~V~~~~g~~s~~~~g~plaGv-~V~--L~~~~g~------~v~~ttTd~~G~f~f~~l--~------- 180 (946)
-+.+. +-.+...|....= -|+|++|. .+. +.+.+.. ......+|.+|.|+|.-- .
T Consensus 234 ~~~~~~~~~~~v~V~ArY~------yGkPV~G~v~v~fg~~~~~~~~~~~~~l~~~~~~dg~G~~~~~~~~~~~~~~~~~ 307 (1642)
T 3prx_B 234 FFYIDGNENFHVSITARYL------YGEEVEGVAFVLFGVKIDDAKKSIPDSLTRIPIIDGDGKATLKRDTFRSRFPNLN 307 (1642)
T ss_dssp EEETTSCCCEEEEEEEEET------TSCBCCEEEEEEEEEEETTEEEECGGGCEEEEEBTTEEEEEECHHHHHHHCCCGG
T ss_pred eEEecCCCeEEEEEEEEeC------CCCceeeeEEEEEEeccCCCccccccccceeEEecCcEEEEEehhhhcccccccc
Confidence 01111 2223333322110 25777773 332 2222111 123457899999997621 0
Q ss_pred -Cc--eEEEEEe---cCCceEEeeccEEEEEccCCeeee----eeeeccceEEeEEEe--e-CCCceeceEEEEEECCCC
Q 002258 181 -PG--KYKLRAS---HPNLSVEVRGSTEVELGFENGEVD----DIFFAPGYEIRGLVV--A-QGNPILGVHIYLYSDDVG 247 (946)
Q Consensus 181 -pG--~Y~l~~~---~~g~~~~~~~~~~v~v~~~~~~v~----~~l~v~g~~v~G~V~--~-~G~Pi~Ga~V~L~~~~~~ 247 (946)
+- .+.|.+. ..|-.........+.+......+. +.+..+|....++|. + +|.|++++.|.+...
T Consensus 308 ~~~~~~l~V~atV~eE~gg~~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dg~P~~~~~V~v~~~--- 384 (1642)
T 3prx_B 308 ELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPYQIHFTKTPKYFKPGMPYELTVYVTNPDGSPAAHVPVVSEAF--- 384 (1642)
T ss_dssp GTSSEEEEEEEEEEETTSSCEEEEEEEEEEEESCSCEEECTTSCSEECTTSCEEEEEEEECTTSCBCCSCEEEEGGG---
T ss_pred cccceEEEEEEEEEEeCCCCEEEeeeeeEEEEecceEEEEEeCccccCCCCCEEEEEEEECCCCCCCCCceEEEEec---
Confidence 11 2334331 223222211112444444333221 334556766667655 3 699999999877432
Q ss_pred cccCCCCCCCccCccceeeEEEecCCceEEECC-cCC--eeEEEEEEEc
Q 002258 248 KVDCPQGSGNALGERKALCHAVSDADGKFMFKS-VPC--GQYELVPHYK 293 (946)
Q Consensus 248 ~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~-Lp~--G~Y~v~~~~~ 293 (946)
-...+||++|...|.= .+. ..+.|.+.+.
T Consensus 385 -----------------~~~~tTd~~G~a~f~i~t~~~~~~l~i~~~~~ 416 (1642)
T 3prx_B 385 -----------------HSMGTTLSDGTAKLILNIPLNAQSLPITVRTN 416 (1642)
T ss_dssp -----------------TEEEECCTTSEEEEEECCCTTCCCCEEEEECC
T ss_pred -----------------cceeeeCCCceEEEEEECCCCCcEEEEEEEEc
Confidence 1456899999877753 222 3577777543
No 116
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=89.04 E-value=0.47 Score=44.14 Aligned_cols=53 Identities=19% Similarity=0.276 Sum_probs=41.0
Q ss_pred EeEEEee--CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEE-----ECCcCCeeEEEEEE
Q 002258 223 IRGLVVA--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM-----FKSVPCGQYELVPH 291 (946)
Q Consensus 223 v~G~V~~--~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~-----f~~Lp~G~Y~v~~~ 291 (946)
|+=.|.+ .|.|.+|+.|.|+..+ ...+...+||+||+.. =..+.+|.|+|++.
T Consensus 11 lstHVLDt~~G~PAagv~V~L~~~~----------------~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~ 70 (121)
T 2h0e_A 11 LTTHILDLTCGKPAANVKIGLKRLG----------------ESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFH 70 (121)
T ss_dssp EECCEEETTTTEECTTCEEEEEETT----------------SCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEEC
T ss_pred eeEEEecCCCcCCCCCCEEEEEECC----------------ceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEE
Confidence 4556775 4999999999999853 1246899999999972 23577999999984
No 117
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=88.94 E-value=1.3 Score=47.34 Aligned_cols=68 Identities=21% Similarity=0.327 Sum_probs=49.5
Q ss_pred EeeCCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEEEEEcCCceEEEecCceE
Q 002258 227 VVAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLV 306 (946)
Q Consensus 227 V~~~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~ 306 (946)
+..++.-++++.|.|... + ..+....||+.|.|.|..|++|.|+|.....+ + |...
T Consensus 203 ~~a~~~~~~~~~vpl~~~-~----------------~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g------~-p~~~ 258 (274)
T 1ti6_B 203 ILVQGDCFEGAKVVLKSG-G----------------KEVASAETNFFGEFKFDALDNGEYTVEIDADG------K-SYSD 258 (274)
T ss_dssp EEETTEECTTCEEEEEET-T----------------EEEEEEECCTTSEEEEEEECSEEEEEEEEETT------E-EEEE
T ss_pred cccccccccCCEEEEEcC-C----------------cEEEEEeecCcCcEEEeccCCcceEEEEecCC------C-Cccc
Confidence 335677888889988843 2 23678999999999999999999999997665 3 5555
Q ss_pred EEEEeccceeee
Q 002258 307 SMSVRHQHVTVP 318 (946)
Q Consensus 307 ~vtV~~~~~~l~ 318 (946)
.+.|...++.+.
T Consensus 259 ~~~~~~~~~~lg 270 (274)
T 1ti6_B 259 TVVIDDKSVDLG 270 (274)
T ss_dssp EEEESSSCEEEE
T ss_pred eeEEccCccccc
Confidence 555544444443
No 118
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=88.89 E-value=0.42 Score=54.40 Aligned_cols=63 Identities=10% Similarity=0.127 Sum_probs=40.6
Q ss_pred CCCCCcceEEEEEeCCCcEEEE--EEeCCCceEEEccccCceEEEEEec--CCceEEeeccEEEEEccCCe
Q 002258 144 KGGGPSNVNVELLSHSGDLISS--VITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEVELGFENG 210 (946)
Q Consensus 144 ~g~plaGv~V~L~~~~g~~v~~--ttTd~~G~f~f~~l~pG~Y~l~~~~--~g~~~~~~~~~~v~v~~~~~ 210 (946)
++..|+||.++|++.+|..+.. .+++..+.+ + +|++|+|+|.+.. .||... ..+.|+|..+.+
T Consensus 37 ~~~~L~GA~f~L~~~~g~~v~e~~w~s~~~~~~-~-~L~~G~YtL~Et~AP~GY~~a--~~I~FtV~~~~v 103 (457)
T 2xi9_A 37 YSKLLEGATLQLTGDNVNSFQARVFSSNDIGER-I-ELSDGTYTLTELNSPAGYSIA--EPITFKVEAGKV 103 (457)
T ss_dssp CSSCCCCCEEEEC---------CEEECCSSCEE-E-ECCSEEEEEEEEECCTTBCCC--CCEEEEEETTEE
T ss_pred CCCccCCcEEEEEeCCCCeeeeeEEEeCCceeE-E-eeCCceEEEEEecCCCCceec--cCEEEEecCCeE
Confidence 3689999999999888866655 666666664 3 5999999999853 488753 347888876554
No 119
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=88.44 E-value=11 Score=37.66 Aligned_cols=128 Identities=17% Similarity=0.294 Sum_probs=76.1
Q ss_pred cccceEEEEEeCCCCEEEE-EEeCC-CcEEE---cCCCCCc---cEEEEEEcCCCcccCCceeEEEEcCCCcCCCceeeE
Q 002258 50 DYSHVTVELRTLDGLVKES-TQCAP-NGYYF---IPVYDKG---SFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINF 121 (946)
Q Consensus 50 ~~sgv~V~L~~~~G~~~~~-t~t~~-nG~y~---ip~l~~G---~Y~l~v~~P~G~~~~p~~v~v~vd~~~~s~~~dinf 121 (946)
-.+.|+|+|+. +|..+.. +.+++ +-.|. +|.|+.| .|+|+....+||.- .+++ .+|.-
T Consensus 21 rp~~i~v~L~~-~G~~~~~~~l~~~~~W~~~F~~Lp~y~~G~~i~YtV~E~~v~gY~~-------~i~G------~~ITN 86 (187)
T 1d2o_A 21 RPEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTT-------DING------TTITN 86 (187)
T ss_dssp CCSEEEEEEEE-TTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEE-------EEET------TEEEE
T ss_pred CCceEEEEEEE-CCeEeeeEEEecCCCcEEEECCCcccCCCCEEEEEEEeCCCCCcEE-------eecc------EEEEc
Confidence 34679999985 6765544 34444 44455 4555556 49998888888752 2333 13333
Q ss_pred EEeC--cEEEeE-EEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEE---eCCCceEEEccccC---c---eEEEEEe
Q 002258 122 RFTG--FTLLGR-VVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVI---TSSEGSYLFKNIIP---G---KYKLRAS 189 (946)
Q Consensus 122 ~~~g--~~IsG~-V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~tt---Td~~G~f~f~~l~p---G---~Y~l~~~ 189 (946)
.... ..|+++ +-.. ++. ..+..+.-++|+|+. +|..+..+. .+.+-.|.|.+|+- | .|+|.+.
T Consensus 87 t~~P~~~~i~V~K~W~d-~~~---~~~~rP~~I~v~L~~-dG~~~g~~~~l~~~n~W~~tf~~Lp~~~~G~~i~YtV~E~ 161 (187)
T 1d2o_A 87 KYTPGETSATVTKNWDD-NNN---QDGKRPTEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEEL 161 (187)
T ss_dssp EECTTEEEEEEEEEEES-STT---SSSCCCSCEEEEEEE-TTEEEEEEEEESGGGTTEEEEEEEESEETTEECCEEEEEC
T ss_pred cccCccccceeeEEEcC-CCC---ccCCCCceEEEEEEe-CCeEeceEEEEecCCceEEEEcCCCccCCCCEEEEEEEEe
Confidence 3322 234443 3332 211 124456789999997 565554322 34567899999985 3 6999885
Q ss_pred --cCCceEE
Q 002258 190 --HPNLSVE 196 (946)
Q Consensus 190 --~~g~~~~ 196 (946)
.+||...
T Consensus 162 ~~~~GY~~~ 170 (187)
T 1d2o_A 162 TKVKGYTTH 170 (187)
T ss_dssp SCCTTEEEE
T ss_pred CcCCCcEEE
Confidence 4688755
No 120
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=88.40 E-value=11 Score=38.13 Aligned_cols=77 Identities=19% Similarity=0.238 Sum_probs=49.4
Q ss_pred cceEEeEEEeeCCCcee----ceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEEEEEcC
Q 002258 219 PGYEIRGLVVAQGNPIL----GVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKG 294 (946)
Q Consensus 219 ~g~~v~G~V~~~G~Pi~----Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~~~~ 294 (946)
+...++|+++.+|+|+. |+.+.|+...-.. + .-.......||.|+ ..|-.|+|.|.+.-.+
T Consensus 6 P~a~l~G~iv~tgE~i~~~~~gv~i~l~e~g~~~----------~----~~~~~~v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 6 PKATLTGKAIYDGEAVGVRSGSSEFALFQDGYAL----------K----GSIPVYIAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp CEEEEEEEEEETTEECBCCTTTEEEEEECCC------------------CCEEEEBCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CCceEEEEEEECCCEeeecCCceEEEEEEcccCC----------C----CCeeEEEcCCCcEE-EEEEcceeEEEECCCC
Confidence 44678999998777764 7999998653100 0 12456778999999 9999999999963223
Q ss_pred CceEEEecCceEEEEEec
Q 002258 295 ENTVFDVSPSLVSMSVRH 312 (946)
Q Consensus 295 ~~~~~~~~P~~~~vtV~~ 312 (946)
. .+.-...++.+.|.+
T Consensus 71 p--f~~~~~dti~v~i~G 86 (202)
T 4fxt_A 71 P--WERPSNDTIYITVRG 86 (202)
T ss_dssp S--BCCCSSCEEEEEESS
T ss_pred C--cccCCCceEEEEECC
Confidence 2 111123445566644
No 121
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=87.32 E-value=20 Score=38.17 Aligned_cols=31 Identities=23% Similarity=0.477 Sum_probs=17.2
Q ss_pred eEEEecCCceEEECCcC--CeeEEEEEEEcCCc
Q 002258 266 CHAVSDADGKFMFKSVP--CGQYELVPHYKGEN 296 (946)
Q Consensus 266 ~~~~TD~~G~f~f~~Lp--~G~Y~v~~~~~~~~ 296 (946)
+...-..+|.|.+.=+| .|.|+|.+.+.+.+
T Consensus 147 ~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~g~~ 179 (288)
T 2j3s_A 147 AEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQH 179 (288)
T ss_dssp EBC-------CCCBCCCCSCEEEEEEEEETTEE
T ss_pred eEEEeCCCCEEEEEEecccceeeEEEEEECCee
Confidence 33344578888877666 68999999877643
No 122
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=86.41 E-value=20 Score=35.61 Aligned_cols=127 Identities=13% Similarity=0.188 Sum_probs=65.6
Q ss_pred ceEEEEEeCCCcEEE-EEEeCCCceEEEc--cccCceEEEEEecCCceEEeecc-EEEEEcc---CCeeee-eeee--cc
Q 002258 150 NVNVELLSHSGDLIS-SVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGS-TEVELGF---ENGEVD-DIFF--AP 219 (946)
Q Consensus 150 Gv~V~L~~~~g~~v~-~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~~~~~~-~~v~v~~---~~~~v~-~~l~--v~ 219 (946)
.+++.+.+++|.... ..+-..+|.|.+. .-.+|.|.|.+...+..+. ++ ..+.+.. +...+. +.+. ..
T Consensus 35 ~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g~~i~--gSPf~~~V~~~d~~~~~~~G~GL~~~~v 112 (188)
T 2k7p_A 35 EITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIP--GSPLQFYVDYVNCGHVTAYGPGLTHGVV 112 (188)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETTEECT--TCSEEEEECCTTSSSCEEESSTTTEEET
T ss_pred eEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECCEecC--CCCEEEEecccCCcceEEeCccccccee
Confidence 466777777776543 3444688987665 4467999999988776543 22 3344421 111110 0000 00
Q ss_pred ceEEeEEEeeCCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcC--CeeEEEEEEEcCC
Q 002258 220 GYEIRGLVVAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVP--CGQYELVPHYKGE 295 (946)
Q Consensus 220 g~~v~G~V~~~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp--~G~Y~v~~~~~~~ 295 (946)
|-...=.|...+....+..|.+....+ ......-..||.|.+.=.| +|.|.|.+.+.+.
T Consensus 113 g~~~~F~V~t~dag~g~l~v~I~gp~~-----------------~~~~~~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 173 (188)
T 2k7p_A 113 NKPATFTVNTKDAGEGGLSLAIEGPSK-----------------AEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQ 173 (188)
T ss_dssp TSCEEEEEECTTCCSSCEEEEEECSSC-----------------CEEEEEECTTSEEEEEEECCSSEEEEEEEEETTE
T ss_pred CccEEEEEEeCCCCCCCeEEEEeCCCC-----------------CeEEEEECCCCEEEEEEEeCCCEEEEEEEEECCE
Confidence 111111222222223344454443211 1123455678977666554 7899999877664
No 123
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=86.37 E-value=38 Score=36.21 Aligned_cols=205 Identities=13% Similarity=0.139 Sum_probs=95.6
Q ss_pred CCeeeceEEEE---cc----EEeeEeCCCceEEEcccCCce-EEEEEEeccc--eecceeeEEEccCcceeceEEEeee-
Q 002258 337 DMGVEGVKILV---DG----HERSITDRDGYYKLDQVTSNR-YTIEAVKVHY--KFNKLKEYMVLPNMASIADIKAISY- 405 (946)
Q Consensus 337 G~pl~ga~V~l---~G----~~~~~TD~~G~f~~~~L~pG~-Y~I~a~~~~y--~~~~~~~v~v~p~~~~i~dI~~~~~- 405 (946)
+.++.+-.|.. ++ .........-.|.+.+|.||+ |.+++.+-.- ...+.......+. ..-.++.+...
T Consensus 120 ~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~-~~P~~l~~~~~~ 198 (368)
T 1fnf_A 120 SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGL-DSPTGIDFSDIT 198 (368)
T ss_dssp TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC-CCCEEEEEESCC
T ss_pred CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEeeecCCC-CCCCccEEEEcc
Confidence 44566666654 11 111233345689999999996 8888765321 1111111111111 11113333221
Q ss_pred --EEEEEEEEcC---CcccEEEEEEeCCC-cccceeeeeCCceEEEEE-EcCee-EEEEEEeeCCCCCCceEEcCCeEEE
Q 002258 406 --DICGVVRTVG---SGNKVKVALTHGPD-KVKPQVKQTDNNGNFCFE-VPPGE-YRLSAMAATPESSSGILFLPPYADV 477 (946)
Q Consensus 406 --~v~G~V~~~~---~~~~a~VtL~~~~~-~~~~~~~~Td~~G~F~f~-l~pG~-Y~v~~~~~~~e~~~G~~~~p~~~~V 477 (946)
+| +|.-.. ......|....... ............-.|.+. |.||+ |.+++.+... .|. .+.....
T Consensus 199 ~~sv--~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~---~g~--~~~~~~~ 271 (368)
T 1fnf_A 199 ANSF--TVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNG---REE--SPLLIGQ 271 (368)
T ss_dssp SSEE--EEEEECCSSCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEET---TEE--CCCEEEE
T ss_pred CCEE--EEEEeCCCCCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeC---Ccc--CCccccc
Confidence 11 122111 23345665553221 111122233455689999 99996 8888877532 231 2222111
Q ss_pred --EEcCcccceEEEEe-eeEEEEEEEeccCCC--CceEEEEEEcCcccccCCcceeEEEeeCCccEEEcccCCcc-EEEE
Q 002258 478 --VVKSPLLNIEFSQA-LVNVLGNVACKERCG--PLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGK-YRLE 551 (946)
Q Consensus 478 --~V~~pv~~i~F~q~-~a~V~G~V~~~~~~~--~~~~VtL~~~~~~~~~~~~~~~~~~t~~~G~f~f~~v~PG~-Y~v~ 551 (946)
+...+..++..... ..+|. |....... .+-.|.....++. .......+....-.|.+.+|.||. |.++
T Consensus 272 ~~t~p~~P~~l~~~~~~~~sv~--l~W~~p~~~i~~Y~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~ 345 (368)
T 1fnf_A 272 QSTVSDVPRDLEVVAATPTSLL--ISWDAPAVTVRYYRITYGETGGN----SPVQEFTVPGSKSTATISGLKPGVDYTIT 345 (368)
T ss_dssp EECCCCSCEEEEEEEEETTEEE--EEEECCSSCCSEEEEEEEETTCC----SCCEEEEEETTCCEEEECSCCTTCCEEEE
T ss_pred ccCCCCCCCeeEEEecCCCEEE--EEeeCCCCccceEEEEEEECCCC----CccEEEEcCCCeeEEEecCCCCCCEEEEE
Confidence 11123334443321 11222 33332211 1334444443332 122233445566789999999998 9999
Q ss_pred EEee
Q 002258 552 VKRT 555 (946)
Q Consensus 552 v~~~ 555 (946)
+...
T Consensus 346 V~A~ 349 (368)
T 1fnf_A 346 VYAV 349 (368)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9854
No 124
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=85.92 E-value=99 Score=40.55 Aligned_cols=95 Identities=21% Similarity=0.315 Sum_probs=52.7
Q ss_pred eEEEEEe--cCCceEEeeccEEEEEccCCee----eeeeeeccceEEeEEEe--e-CCCceece--EEEEEECCCCcccC
Q 002258 183 KYKLRAS--HPNLSVEVRGSTEVELGFENGE----VDDIFFAPGYEIRGLVV--A-QGNPILGV--HIYLYSDDVGKVDC 251 (946)
Q Consensus 183 ~Y~l~~~--~~g~~~~~~~~~~v~v~~~~~~----v~~~l~v~g~~v~G~V~--~-~G~Pi~Ga--~V~L~~~~~~~~~c 251 (946)
.|.|... .++..+.. +..|.+...+.. .+..+.-+|-.|.=||. + +.+|+..- .|.+.+.++..+.
T Consensus 77 ~~~v~v~~~~~~~~f~~--~~~v~v~~~~~~~fiqTDK~iY~Pgq~V~~rv~~~~~~~~p~~~~~~~v~i~dp~g~~i~- 153 (1451)
T 4acq_A 77 VMFLTVQVKGPTQEFKK--RTTVMVKNEDSLVFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIA- 153 (1451)
T ss_dssp EEEEEEEEECSSCCEEE--EEEEEEECCCCEEEEEESCSEECTTCEEEEEEEEECTTCCBCCCEEEEEEEECTTSCEEE-
T ss_pred cEEEEEEEEeCCeEEEE--EEEEEEEccCccEEEECCCCcCCCCCEEEEEEEEECCCCcCccCceeEEEEECCCCCEEE-
Confidence 4666554 35555542 234555443322 23455567767766655 2 35777543 3566666554331
Q ss_pred CCCCCCccCccceeeEEEecCCc----eEEECCcC-CeeEEEEEEEc
Q 002258 252 PQGSGNALGERKALCHAVSDADG----KFMFKSVP-CGQYELVPHYK 293 (946)
Q Consensus 252 ~~g~~~~~~~g~~~~~~~TD~~G----~f~f~~Lp-~G~Y~v~~~~~ 293 (946)
.....++..| .|.++..+ .|.|+|.+.+.
T Consensus 154 -------------~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 154 -------------QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp -------------EEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred -------------EeeeccCCCCeEEEEeECCCCCCceeEEEEEEec
Confidence 1235667767 55555554 69999999765
No 125
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=85.71 E-value=5.6 Score=42.45 Aligned_cols=52 Identities=23% Similarity=0.279 Sum_probs=42.4
Q ss_pred EEEeEEEcCCCCeeeceEEEE---ccEE---eeEeCCCceEE--EcccCCceEEEEEEecc
Q 002258 327 SVGGRVVDENDMGVEGVKILV---DGHE---RSITDRDGYYK--LDQVTSNRYTIEAVKVH 379 (946)
Q Consensus 327 sV~G~V~d~~G~pl~ga~V~l---~G~~---~~~TD~~G~f~--~~~L~pG~Y~I~a~~~~ 379 (946)
.+.-+|.| +|+||+|..|.+ +|.. ..+||++|..+ |....+|.++|++...+
T Consensus 22 t~tatV~D-~gnpv~g~~V~fs~~~G~l~~~~~~Td~~G~atvtltst~aG~~~VtA~v~~ 81 (282)
T 1f00_I 22 TYTVKVMK-GDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSD 81 (282)
T ss_dssp EEEEEEEE-TTEECTTCEEEEEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETT
T ss_pred EEEEEEEE-CCcccCCcEEEEEcCCCccccceeEECCCcEEEEEEEcCCceEEEEEEEECC
Confidence 56667889 999999999988 6643 25999999876 55668999999999876
No 126
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=85.17 E-value=59 Score=38.42 Aligned_cols=43 Identities=21% Similarity=0.375 Sum_probs=30.7
Q ss_pred ceEEEEEeCCCCEEEEEEe-CCCcEEE----cCC-CCCccEEEEEEcCC
Q 002258 53 HVTVELRTLDGLVKESTQC-APNGYYF----IPV-YDKGSFVIKVNGPE 95 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t-~~nG~y~----ip~-l~~G~Y~l~v~~P~ 95 (946)
-+++.|.+++|..+.+... .++|.|. +|. ...|.|+|++...+
T Consensus 154 ~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 154 TITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSD 202 (656)
T ss_dssp CEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESS
T ss_pred cceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcC
Confidence 4678899999988777543 4477766 332 24699999988644
No 127
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=84.85 E-value=3.9 Score=43.70 Aligned_cols=58 Identities=10% Similarity=0.059 Sum_probs=44.2
Q ss_pred EEeEEEeeCCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEE--ECCcCCeeEEEEEEEcC
Q 002258 222 EIRGLVVAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM--FKSVPCGQYELVPHYKG 294 (946)
Q Consensus 222 ~v~G~V~~~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~--f~~Lp~G~Y~v~~~~~~ 294 (946)
.+.-+|.+.|+||+|..|......+.. .....+||++|... +.+..+|.+.|.+...+
T Consensus 22 t~tatV~D~gnpv~g~~V~fs~~~G~l---------------~~~~~~Td~~G~atvtltst~aG~~~VtA~v~~ 81 (282)
T 1f00_I 22 TYTVKVMKGDKPVSNQEVTFTTTLGKL---------------SNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSD 81 (282)
T ss_dssp EEEEEEEETTEECTTCEEEEEESSSEE---------------SCSEEECCTTSEEEEEEECSSCEEECEEEEETT
T ss_pred EEEEEEEECCcccCCcEEEEEcCCCcc---------------ccceeEECCCcEEEEEEEcCCceEEEEEEEECC
Confidence 455577778999999999988765421 12467999999997 55677999999997554
No 128
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=84.42 E-value=9 Score=39.01 Aligned_cols=59 Identities=22% Similarity=0.425 Sum_probs=42.5
Q ss_pred ccceEEeEEEeeCCCcee-----ceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCeeEEEEEE
Q 002258 218 APGYEIRGLVVAQGNPIL-----GVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPH 291 (946)
Q Consensus 218 v~g~~v~G~V~~~G~Pi~-----Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G~Y~v~~~ 291 (946)
.+...++|+|+.+|+||. |+.+.|+...-.. + .-.......||.|+ ..|-.|+|+|.+.
T Consensus 8 eP~a~l~G~iv~tGE~i~~~~~~gv~i~l~E~gy~~----------~----~~~~~~v~qDGtf~-~~lF~G~Yki~~~ 71 (215)
T 3hn5_A 8 APESMLTGRVMYNGEALQLRGNEAVQLQLYQHGYAK----------H----DPINVYVNQDGMYS-ANLFDGEYQMITK 71 (215)
T ss_dssp --CEEEEEEEEETTEECCCCCTTSCEEEEESSCGGG----------C----CCEEEEBCTTSEEE-EEECSEEEEEEEC
T ss_pred CCCceEEEEEEECCCEeeecCCCceEEEEEEcccCC----------C----CCeeEEEcCCCcEE-EEEECceeEEEEe
Confidence 345678999998777763 5899998653100 0 12466778999999 8999999999983
No 129
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=84.32 E-value=16 Score=36.26 Aligned_cols=50 Identities=14% Similarity=0.060 Sum_probs=35.8
Q ss_pred CCCcceEEEEEeCCCcEE-EEEEeCCCceEE--EccccCceEEEEEecCCceE
Q 002258 146 GGPSNVNVELLSHSGDLI-SSVITSSEGSYL--FKNIIPGKYKLRASHPNLSV 195 (946)
Q Consensus 146 ~plaGv~V~L~~~~g~~v-~~ttTd~~G~f~--f~~l~pG~Y~l~~~~~g~~~ 195 (946)
.....+++++.+++|..+ +..+-..+|.|. |..-.+|.|.|.+...|..+
T Consensus 28 ~~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g~~V 80 (191)
T 2k7q_A 28 TDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHV 80 (191)
T ss_dssp CCSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETTEEC
T ss_pred CCCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECCEEC
Confidence 456668888888888543 344447789886 45556899999998877654
No 130
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=83.78 E-value=51 Score=35.38 Aligned_cols=285 Identities=13% Similarity=0.149 Sum_probs=124.6
Q ss_pred CCcceEEEEEeCCC---cEEEEEEeCCCceEEEccccCc-eEEEEEec--CCceEEeeccEEEEEccCCeeeeeeeec--
Q 002258 147 GPSNVNVELLSHSG---DLISSVITSSEGSYLFKNIIPG-KYKLRASH--PNLSVEVRGSTEVELGFENGEVDDIFFA-- 218 (946)
Q Consensus 147 plaGv~V~L~~~~g---~~v~~ttTd~~G~f~f~~l~pG-~Y~l~~~~--~g~~~~~~~~~~v~v~~~~~~v~~~l~v-- 218 (946)
++.|-.|.....++ ...........-.|.+.+|.|| .|.+++.+ .+.. . .+ ..+.....--. ...+.+
T Consensus 31 ~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~-s-~~-~~~~~~~~~p~-p~~l~~~~ 106 (375)
T 3t1w_A 31 DITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKE-S-VP-ISDTIIPEVPQ-LTDLSFVD 106 (375)
T ss_dssp SCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEEETTEE-C-CC-EEEEECCCCCC-CSCCEEEC
T ss_pred CeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEEcCCCC-C-Cc-EEeeEcCCCCC-CceEEEEe
Confidence 34455555443322 2233344556679999999999 58877644 2211 1 11 12211111000 001111
Q ss_pred -cceEEeEEEe-e--CCCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCCe-eEEEEEEEc
Q 002258 219 -PGYEIRGLVV-A--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCG-QYELVPHYK 293 (946)
Q Consensus 219 -~g~~v~G~V~-~--~G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~G-~Y~v~~~~~ 293 (946)
....+ +|. . .+.++.+-.|........ ............-.|.+.+|.|| .|.+++...
T Consensus 107 ~~~~si--~l~W~~~~~~~i~~Y~v~~~~~~~~--------------~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 170 (375)
T 3t1w_A 107 ITDSSI--GLRWTPLNSSTIIGYRITVVAAGEG--------------IPIFEDFVDSSVGYYTVTGLEPGIDYDISVITL 170 (375)
T ss_dssp CCSSEE--EEECCCCCCTTEEEEEEEEEESSSC--------------CSCEEEEECTTCCEEEEECCCTTCEEEEEEEEE
T ss_pred cCCCeE--EEEEECCCCCCceEEEEEEEECCCC--------------CceeEEEcCCCcceEEEeCCCCCCEEEEEEEEE
Confidence 11111 121 1 244677777766554211 00123344556679999999999 587776422
Q ss_pred CCceEEEecCceEEEEEeccceeeeceeEEEe---eEEEeEEEcCCCCeeeceEEEE---c--cE--EeeEeCCCceEEE
Q 002258 294 GENTVFDVSPSLVSMSVRHQHVTVPEKFQVTG---FSVGGRVVDENDMGVEGVKILV---D--GH--ERSITDRDGYYKL 363 (946)
Q Consensus 294 ~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g---~sV~G~V~d~~G~pl~ga~V~l---~--G~--~~~~TD~~G~f~~ 363 (946)
.... . -.|....+... ..-+..+.+.. -+|.-.-..+.+.++.+-.|.. + +. ........-.|.+
T Consensus 171 ~~~g-~-s~~s~~~~~t~---~~~p~~l~~~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i 245 (375)
T 3t1w_A 171 INGG-E-SAPTTLTQQTA---VPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVL 245 (375)
T ss_dssp ETTE-E-CCCEEEEEECC---CCCCEEEEEESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEE
T ss_pred eCCc-c-cCCeeeeeecC---CCCCceeEEEecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEe
Confidence 2111 0 01111111100 00011111110 0111111112344566666655 1 11 1123344578999
Q ss_pred cccCCce-EEEEEEeccc--eecceeeEEE-ccCcceeceEEEeee---EEEEEEEEc---CCcccEEEEEEeCCC-ccc
Q 002258 364 DQVTSNR-YTIEAVKVHY--KFNKLKEYMV-LPNMASIADIKAISY---DICGVVRTV---GSGNKVKVALTHGPD-KVK 432 (946)
Q Consensus 364 ~~L~pG~-Y~I~a~~~~y--~~~~~~~v~v-~p~~~~i~dI~~~~~---~v~G~V~~~---~~~~~a~VtL~~~~~-~~~ 432 (946)
.+|.||+ |.+++.+-.- .......... .|.. -.++.+... ++ .|.-. .......|......+ ...
T Consensus 246 ~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~~sv--~l~W~~p~~~~~~Y~v~~~~~~~~~~~ 321 (375)
T 3t1w_A 246 TNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDS--PTGIDFSDITANSF--TVHWIAPRATITGYRIRHHPEHFSGRP 321 (375)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC--CEEEEEESCCSSCE--EEEEECCSSCCSEEEEEEEETTCCSSC
T ss_pred CCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCC--CCccEeeeccCCEE--EEEECCCCcceeeEEEEEEECCCCCcc
Confidence 9999996 8888765321 1111111111 1111 113333211 11 12211 123456666654322 111
Q ss_pred ceeeeeCCceEEEEE-EcCe-eEEEEEEee
Q 002258 433 PQVKQTDNNGNFCFE-VPPG-EYRLSAMAA 460 (946)
Q Consensus 433 ~~~~~Td~~G~F~f~-l~pG-~Y~v~~~~~ 460 (946)
.........-.|.+. |.|| .|.+++.+.
T Consensus 322 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 351 (375)
T 3t1w_A 322 REDRVPHSRNSITLTNLTPGTEYVVSIVAL 351 (375)
T ss_dssp EEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred eeEEcCCCccEEEECCCCCCCEEEEEEEEE
Confidence 123334455688888 9999 688888774
No 131
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=82.88 E-value=7 Score=46.98 Aligned_cols=131 Identities=14% Similarity=0.073 Sum_probs=71.7
Q ss_pred EeEEEcCCC-CeeeceEEEEc---cE-EeeEeCCCceEEEcccCCceEEEEEEeccceeccee--------e-EEEccCc
Q 002258 329 GGRVVDEND-MGVEGVKILVD---GH-ERSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLK--------E-YMVLPNM 394 (946)
Q Consensus 329 ~G~V~d~~G-~pl~ga~V~l~---G~-~~~~TD~~G~f~~~~L~pG~Y~I~a~~~~y~~~~~~--------~-v~v~p~~ 394 (946)
..+|.|..| -+++.+.|.|. |. ..+.|+.||...|.++.||+|+|.+..+...-.... + +.+.-..
T Consensus 451 ~v~vtd~~~~~~~~~~~v~l~~~~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (671)
T 1r6v_A 451 QVVVTDAKGNFGVPTVFVSMMRDNGSCYYAKTGPDGIARFPHIDSGTYDIFVGGPDHWDRALAPYDGESIPGGYAIALRM 530 (671)
T ss_dssp EEEEECTTSCSBCTTEEEEEECSSSCCEEEECCTTSEEEEEEEECEEEEEEEEEECCCSCCSCTTTSCCCCCSCSSCSCG
T ss_pred EEEEecCCCCcCcceeEEEEecCCCceEecccCCCCceeeeccCceEEEEEEecccccCCCccccccccCCceeeeccch
Confidence 445667633 45677777773 33 236899999999999999999999876543222110 0 0000001
Q ss_pred ceeceEEEee-------eEEEEEEE------EcC---CcccEEEEEEeCCCcccceeeeeCCceEEEEEEcCeeEEEEEE
Q 002258 395 ASIADIKAIS-------YDICGVVR------TVG---SGNKVKVALTHGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSAM 458 (946)
Q Consensus 395 ~~i~dI~~~~-------~~v~G~V~------~~~---~~~~a~VtL~~~~~~~~~~~~~Td~~G~F~f~l~pG~Y~v~~~ 458 (946)
.....-.+.. ..|.++.. ... .....++.+.+.......+.....+++.|.|...||.|.|...
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (671)
T 1r6v_A 531 AEERQASFVGFGVSPDATQLNVNFNSTLQVKFSTNLSTLKDPQFVVVDPLLRGVYGRVAYARNQTYDLSLLSGQISFGIQ 610 (671)
T ss_dssp GGCCEEEEEEEEEBTTBCEEEEECCCCEEEEECCCCTTSSSCEEEEECTTCSCEEEEEECCTTCEEECTTCEEEEEEEEE
T ss_pred hhhcccccccccccccceEEEEEEeeEEEEEecCcCCCCCCceEEEecCccccceEEeeeccCCceEeEecCCeEEEEEE
Confidence 0100111111 12222211 111 1234456565533222234556677999999977999999987
Q ss_pred e
Q 002258 459 A 459 (946)
Q Consensus 459 ~ 459 (946)
.
T Consensus 611 ~ 611 (671)
T 1r6v_A 611 T 611 (671)
T ss_dssp C
T ss_pred e
Confidence 6
No 132
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=82.87 E-value=29 Score=41.56 Aligned_cols=46 Identities=24% Similarity=0.359 Sum_probs=37.4
Q ss_pred CCCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCceEEEEEecCC
Q 002258 146 GGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPN 192 (946)
Q Consensus 146 ~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~g 192 (946)
.+++.+.|+|...+|. ...+.|+.+|...|..+.||+|.|.+..+.
T Consensus 461 ~~~~~~~v~l~~~~~~-~~~~~t~~dg~~~~~~~~~G~Y~~~v~g~~ 506 (671)
T 1r6v_A 461 FGVPTVFVSMMRDNGS-CYYAKTGPDGIARFPHIDSGTYDIFVGGPD 506 (671)
T ss_dssp SBCTTEEEEEECSSSC-CEEEECCTTSEEEEEEEECEEEEEEEEEEC
T ss_pred cCcceeEEEEecCCCc-eEecccCCCCceeeeccCceEEEEEEeccc
Confidence 4567788999877764 457889999999999999999999986543
No 133
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=82.50 E-value=29 Score=34.46 Aligned_cols=135 Identities=14% Similarity=0.122 Sum_probs=72.4
Q ss_pred ccccceEEEEEeCCCCEEEEEEe-CCCcEEE---cCCCCCccEEEEEEcCCCcccCCceeEEEEcC----C--CcCC-Cc
Q 002258 49 LDYSHVTVELRTLDGLVKESTQC-APNGYYF---IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDD----T--GCNG-NE 117 (946)
Q Consensus 49 i~~sgv~V~L~~~~G~~~~~t~t-~~nG~y~---ip~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~----~--~~s~-~~ 117 (946)
.+...+++++..++|....-... ..+|.|. .|- ..|.|.|.+.-- |....-.+..+.|.. + .|.. +.
T Consensus 28 ~~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~-~~G~~~i~V~~~-g~~V~gSPf~v~V~~~~~~d~~~~~~~G~ 105 (191)
T 2k7q_A 28 TDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPK-ETGEHLVHVKKN-GQHVASSPIPVVISQSEIGDASRVRVSGQ 105 (191)
T ss_dssp CCSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCS-SSEEEEEEEEET-TEECTTCSEEEEECGGGTTCGGGCEEESG
T ss_pred CCCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEcc-CCEeEEEEEEEC-CEECCCCCEEEEEcccCCCCcceEEEeCc
Confidence 34568999999999976554444 4589887 455 799999988763 232222234444421 1 1110 00
Q ss_pred eeeEEEeCcEEEeEEEeccCCccccCCCCCCcceEEEEEeCCCcEEEEEEeCCCceEEEc--cccCceEEEEEecCCceE
Q 002258 118 DINFRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSV 195 (946)
Q Consensus 118 dinf~~~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~ 195 (946)
.+.-...|....=.|... +++..+++|.+..+++.. ....-..||.|.+. .-.||.|.|.+...+..+
T Consensus 106 Gl~~~~~g~~~~F~V~t~---------dag~g~l~v~V~gp~~~~-~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I 175 (191)
T 2k7q_A 106 GLHEGHTFEPAEFIIDTR---------DAGYGGLSLSIEGPSKVD-INTEDLEDGTCRVTYCPTEPGNYIINIKFADQHV 175 (191)
T ss_dssp GGTEEESSSCEEEEEECG---------GGCSEEEEEEEEESSCEE-EEEEECTTSCEEEEEEESSCEEEEEEEEETTEEC
T ss_pred cccceecCCcEEEEEEeC---------CCCCCceEEEEECCCCce-EEEEECCCCEEEEEEEeCCCceEEEEEEECCEEC
Confidence 011111121111122222 234445667666555422 24455677865544 446789999887766543
No 134
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=81.03 E-value=39 Score=33.99 Aligned_cols=138 Identities=12% Similarity=0.163 Sum_probs=75.7
Q ss_pred cceEEEEEeCCCcEEE-EEEeCCCceEEEccc--cCceEEEEEecCCceEEeecc-EEEEEccCCeeeeeeeeccceEEe
Q 002258 149 SNVNVELLSHSGDLIS-SVITSSEGSYLFKNI--IPGKYKLRASHPNLSVEVRGS-TEVELGFENGEVDDIFFAPGYEIR 224 (946)
Q Consensus 149 aGv~V~L~~~~g~~v~-~ttTd~~G~f~f~~l--~pG~Y~l~~~~~g~~~~~~~~-~~v~v~~~~~~v~~~l~v~g~~v~ 224 (946)
..++|.+..++|..+. ..+-..||.|.+.-. .+|.|.|.+...+..+. ++ ..+.+..+... .. ..+. ...
T Consensus 44 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g~~i~--gSPf~v~v~~~~~~-~~-~~~~--~~~ 117 (212)
T 1qfh_A 44 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIK--NMPIDVKCIEGANG-ED-SSFG--SFT 117 (212)
T ss_dssp CCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETTEECB--TCSEEEEEECCCCG-GG-CEEE--EEE
T ss_pred CeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECCEecC--CCcceEEEccCCCC-Cc-eEEE--EEE
Confidence 3467777776664333 344457898886543 57999999988776543 22 34444332110 00 0000 011
Q ss_pred EEEe--e-CCCce----eceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcC--CeeEEEEEEEcCC
Q 002258 225 GLVV--A-QGNPI----LGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVP--CGQYELVPHYKGE 295 (946)
Q Consensus 225 G~V~--~-~G~Pi----~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp--~G~Y~v~~~~~~~ 295 (946)
=.|. + .|++. ....+.+...++ ...+......||.|.+.=.| +|.|.|.+.+.+.
T Consensus 118 f~V~~~D~~G~~~~~G~~~l~v~i~~p~g----------------~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~ 181 (212)
T 1qfh_A 118 FTVAAKNKKGEVKTYGGDKFEVSITGPAE----------------EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 181 (212)
T ss_dssp EEEECBCTTSSBCSSCCCCEEEEEEECCS----------------EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred EEEEEeccCCCEeecCCCcEEEEEECCCC----------------ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 1121 1 24332 345666665432 12355667789988766554 7999999987765
Q ss_pred ceEEEecCceEEEEEec
Q 002258 296 NTVFDVSPSLVSMSVRH 312 (946)
Q Consensus 296 ~~~~~~~P~~~~vtV~~ 312 (946)
+ +..+...+.|..
T Consensus 182 ~----I~gSPF~v~V~~ 194 (212)
T 1qfh_A 182 H----IEGSPFKQVLGN 194 (212)
T ss_dssp E----CBTCSEEEEESC
T ss_pred E----CCCCCeEEEEcC
Confidence 4 333445555544
No 135
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=78.17 E-value=12 Score=38.23 Aligned_cols=57 Identities=18% Similarity=0.324 Sum_probs=39.0
Q ss_pred eeEEEeeEEEeEEEcCCCCee-----eceEEEE------c-cEEeeEeCCCceEEEcccCCceEEEEEEec
Q 002258 320 KFQVTGFSVGGRVVDENDMGV-----EGVKILV------D-GHERSITDRDGYYKLDQVTSNRYTIEAVKV 378 (946)
Q Consensus 320 ~f~~~g~sV~G~V~d~~G~pl-----~ga~V~l------~-G~~~~~TD~~G~f~~~~L~pG~Y~I~a~~~ 378 (946)
++..+...+.|+|+. +|+|| .|++|.| + +..-.....||.|+ .-|=.|+|.|.....
T Consensus 5 NYDeP~a~l~G~iv~-tGE~i~~~~~~gv~i~l~E~gy~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~g 73 (215)
T 3hn5_A 5 NYDAPESMLTGRVMY-NGEALQLRGNEAVQLQLYQHGYAKHDPINVYVNQDGMYS-ANLFDGEYQMITKSG 73 (215)
T ss_dssp -----CEEEEEEEEE-TTEECCCCCTTSCEEEEESSCGGGCCCEEEEBCTTSEEE-EEECSEEEEEEECTT
T ss_pred CCCCCCceEEEEEEE-CCCEeeecCCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEECceeEEEEecC
Confidence 355556789999984 45554 3588888 1 22224788999999 799999999998743
No 136
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=77.91 E-value=67 Score=33.05 Aligned_cols=44 Identities=11% Similarity=0.227 Sum_probs=25.5
Q ss_pred CCcceEEEEEeCC--CcEEEEEEeCCCceEEEccccCc-eEEEEEec
Q 002258 147 GPSNVNVELLSHS--GDLISSVITSSEGSYLFKNIIPG-KYKLRASH 190 (946)
Q Consensus 147 plaGv~V~L~~~~--g~~v~~ttTd~~G~f~f~~l~pG-~Y~l~~~~ 190 (946)
++.|-.|.....+ +.......+...-.|.+.+|.|| .|.+++.+
T Consensus 47 ~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 93 (290)
T 3r8q_A 47 QLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYA 93 (290)
T ss_dssp CCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEE
T ss_pred CeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEE
Confidence 4445555544332 22222233445568999999999 58777643
No 137
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=76.36 E-value=73 Score=32.72 Aligned_cols=185 Identities=10% Similarity=0.102 Sum_probs=84.6
Q ss_pred CCCceEEEcccCCce-EEEEEEeccc-eecceeeEEE-ccC-cceeceEEEeee---EEEEEEEEc--C-CcccEEEEEE
Q 002258 356 DRDGYYKLDQVTSNR-YTIEAVKVHY-KFNKLKEYMV-LPN-MASIADIKAISY---DICGVVRTV--G-SGNKVKVALT 425 (946)
Q Consensus 356 D~~G~f~~~~L~pG~-Y~I~a~~~~y-~~~~~~~v~v-~p~-~~~i~dI~~~~~---~v~G~V~~~--~-~~~~a~VtL~ 425 (946)
...-.|.+.+|.||+ |.+++.+-.- .........+ +.. .....++.+... +| +|.-. . ......|...
T Consensus 71 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~~sv--~l~W~~p~~~~~~Y~v~~~ 148 (290)
T 3r8q_A 71 PDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTI--TISWRTKTETITGFQVDAV 148 (290)
T ss_dssp TTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECSSCE--EEEEECCSCCCCEEEEEEE
T ss_pred CCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCCCeE--EEEEeCCCCcccEEEEEEE
Confidence 345589999999996 8888765321 1111111111 111 111123332211 11 11111 1 2344566554
Q ss_pred eCCCcccceeeeeCCceEEEEE-EcCee-EEEEEEeeCCCCCCceEEcCCeEEEEE-c--CcccceEEEEe-eeEEEEEE
Q 002258 426 HGPDKVKPQVKQTDNNGNFCFE-VPPGE-YRLSAMAATPESSSGILFLPPYADVVV-K--SPLLNIEFSQA-LVNVLGNV 499 (946)
Q Consensus 426 ~~~~~~~~~~~~Td~~G~F~f~-l~pG~-Y~v~~~~~~~e~~~G~~~~p~~~~V~V-~--~pv~~i~F~q~-~a~V~G~V 499 (946)
...+............-.|.+. |.||+ |.+++.+... .|. . ....+.. . .+..++..... ..+|. |
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~---~g~--s-~~~~~~~~t~p~~P~~l~~~~~~~~sv~--l 220 (290)
T 3r8q_A 149 PANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLND---NAR--S-SPVVIDASTAIDAPSNLRFLATTPNSLL--V 220 (290)
T ss_dssp ESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET---TEE--C-CCEEEEEECCCCCCEEEEEEEEETTEEE--E
T ss_pred ECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeC---Ccc--c-CCEEEEecCCCCCCCccEEEeeCCCEEE--E
Confidence 3222211122333445678998 99997 9988877432 231 1 1223333 1 33344444321 11222 3
Q ss_pred EeccCCC--CceEEEEEEcCcccccCCcceeE-EEeeCCccEEEcccCCcc-EEEEEEee
Q 002258 500 ACKERCG--PLVTVTLMRLGQKHYDGTEKKTV-SLTDDSDQFLFRDVLPGK-YRLEVKRT 555 (946)
Q Consensus 500 ~~~~~~~--~~~~VtL~~~~~~~~~~~~~~~~-~~t~~~G~f~f~~v~PG~-Y~v~v~~~ 555 (946)
......+ .+-.|.....+.. ..... ......-.|.+.+|.||+ |.+++...
T Consensus 221 ~W~~p~~~~~~Y~v~~~~~~~~-----~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 275 (290)
T 3r8q_A 221 SWQPPRARITGYIIKYEKPGSP-----PREVVPRPRPGVTEATITGLEPGTEYTIYVIAL 275 (290)
T ss_dssp EEECCSSCCCEEEEEEECTTSC-----CEECSSCCCTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred EEeCCCCcccEEEEEEEeCCCC-----cceeEeccCCCccEEEECCCCCCCEEEEEEEEE
Confidence 3332212 1223333322221 11001 112356789999999996 99998854
No 138
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=75.38 E-value=4.6 Score=36.71 Aligned_cols=49 Identities=14% Similarity=0.277 Sum_probs=37.8
Q ss_pred cccceEEEEE-eCCCCEEEEEEeCC--CcEEE--cCCCCCccEEEEEEcC-CCcc
Q 002258 50 DYSHVTVELR-TLDGLVKESTQCAP--NGYYF--IPVYDKGSFVIKVNGP-EGWS 98 (946)
Q Consensus 50 ~~sgv~V~L~-~~~G~~~~~t~t~~--nG~y~--ip~l~~G~Y~l~v~~P-~G~~ 98 (946)
++..|+|++. +..|.++++-.... +.++. +..+.+|.|.|+++.+ .+|.
T Consensus 47 ~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~~~~l 101 (108)
T 3d33_A 47 PDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTPSGHL 101 (108)
T ss_dssp CCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEESSCEE
T ss_pred cCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCCCCEE
Confidence 4569999999 67799998876643 34555 5666899999999988 6554
No 139
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=74.30 E-value=3 Score=38.59 Aligned_cols=44 Identities=14% Similarity=0.291 Sum_probs=33.6
Q ss_pred cEEEeEEEeccCCccccCCCCCC--cceEEEEEeCC------CcEEEEEEeCCCceEEEcc
Q 002258 126 FTLLGRVVGAIGGESCLDKGGGP--SNVNVELLSHS------GDLISSVITSSEGSYLFKN 178 (946)
Q Consensus 126 ~~IsG~V~~~~g~~s~~~~g~pl--aGv~V~L~~~~------g~~v~~ttTd~~G~f~f~~ 178 (946)
..|.|++.=. +.|. .+|.|.|++.+ ...+.++.||++|+|.+.+
T Consensus 5 V~V~G~L~C~---------~~Pa~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 5 LMATGVLKCP---------TDPEAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp EEEEEEEECT---------TCGGGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEE
T ss_pred EEEEEEEEeC---------CccCCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEE
Confidence 4578888742 4664 48999999622 2578899999999999985
No 140
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=73.71 E-value=9.4 Score=34.00 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=36.9
Q ss_pred eEEEeEEEcCCCCeeeceEEEEccEEeeE-eCCCceEEEcccCCceEEEEEEecc
Q 002258 326 FSVGGRVVDENDMGVEGVKILVDGHERSI-TDRDGYYKLDQVTSNRYTIEAVKVH 379 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l~G~~~~~-TD~~G~f~~~~L~pG~Y~I~a~~~~ 379 (946)
..|.+...|.+| .|..+.|++||..+.+ |-+-=.|.+... +|.|+|++++-+
T Consensus 19 v~i~a~A~D~dg-~V~kVef~vdg~~vg~dt~apy~~~w~~~-~G~htl~a~AtD 71 (98)
T 3pe9_A 19 LKITATASDSDG-KISRVDFLVDGEVIGSDREAPYEYEWKAV-EGNHEISVIAYD 71 (98)
T ss_dssp EEEEEEECCSSS-CEEEEEEEETTEEEEEECSSSEEEEEECC-SEEEEEEEEEEE
T ss_pred EEEEEEEEeCCC-CEEEEEEEECCEEecccccCCEEEEEEcC-CccEEEEEEEEE
Confidence 456677776655 7999999999987753 223335666555 899999998744
No 141
>3rfz_B Outer membrane usher protein, type 1 fimbrial SYN; beta-barrel, pilus assembly, outer-membrane, cell adhesion-T protein-chaperone complex; 2.80A {Escherichia coli} PDB: 3ohn_A 1zdv_A
Probab=72.78 E-value=19 Score=44.39 Aligned_cols=106 Identities=8% Similarity=0.112 Sum_probs=68.8
Q ss_pred EEecCCceEEECCcCCe-eEEEEEEEcCCceEEEecCceEEEEEeccceeeeceeEE-EeeEEEeEEEcCCCCeee-ceE
Q 002258 268 AVSDADGKFMFKSVPCG-QYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQV-TGFSVGGRVVDENDMGVE-GVK 344 (946)
Q Consensus 268 ~~TD~~G~f~f~~Lp~G-~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~-~g~sV~G~V~d~~G~pl~-ga~ 344 (946)
+.||..|.-.++.|.|= .-+|......-+...++.-....+....+.+... .|.+ .+..+-.++.++ |+||+ ||.
T Consensus 692 ~~Td~~G~avvp~l~pY~~N~i~iD~~~Lp~dvel~~t~~~v~P~~GAvv~~-~F~~~~g~~~l~~l~~~-G~~lPfGa~ 769 (843)
T 3rfz_B 692 VRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVRA-EFKARVGIKLLMTLTHN-NKPLPFGAM 769 (843)
T ss_dssp CBCCTTSEEEESCCCTTSCEEEEBCGGGSCTTEEESCSEEEECBCTTCEEEE-ECCEEESEEEEEEEEET-TEECCTTCE
T ss_pred ceECCCCeEEECCCCcccccEEEEcCCCCCCCEEEeccEEEEEECCCCEEEE-EEEEEeeEEEEEEEeeC-CCCCCCceE
Confidence 57999999999999874 3445442121111122333333444444444333 3543 355677788899 99999 898
Q ss_pred EEE-ccEEeeEeCCCceEEEcccCCceEEEEEE
Q 002258 345 ILV-DGHERSITDRDGYYKLDQVTSNRYTIEAV 376 (946)
Q Consensus 345 V~l-~G~~~~~TD~~G~f~~~~L~pG~Y~I~a~ 376 (946)
|.- +|+.+...+.+|..-+.+++++. +|.+.
T Consensus 770 V~~~~~~~~giVg~~G~vyl~gl~~~~-~L~V~ 801 (843)
T 3rfz_B 770 VTSESSQSSGIVADNGQVYLSGMPLAG-KVQVK 801 (843)
T ss_dssp EEESSSSCEEECCGGGEEEEEEECSEE-EEEEE
T ss_pred EEcCCCcEEEEEcCCCEEEEEcCCCCc-EEEEE
Confidence 876 46667899999999999998753 45554
No 142
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=72.20 E-value=26 Score=35.31 Aligned_cols=55 Identities=15% Similarity=0.242 Sum_probs=38.8
Q ss_pred EEeeEEEeEEEcCCCCee----eceEEEE--cc-----EEeeEeCCCceEEEcccCCceEEEEEEecc
Q 002258 323 VTGFSVGGRVVDENDMGV----EGVKILV--DG-----HERSITDRDGYYKLDQVTSNRYTIEAVKVH 379 (946)
Q Consensus 323 ~~g~sV~G~V~d~~G~pl----~ga~V~l--~G-----~~~~~TD~~G~f~~~~L~pG~Y~I~a~~~~ 379 (946)
.+...+.|+|+. +|+|| .|+++.| .| ..-.....||.|+ .-|=.|+|.|.....+
T Consensus 5 ~P~a~l~G~iv~-tgE~i~~~~~gv~i~l~e~g~~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 5 EPKATLTGKAIY-DGEAVGVRSGSSEFALFQDGYALKGSIPVYIAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp -CEEEEEEEEEE-TTEECBCCTTTEEEEEECCC----CCEEEEBCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CCCceEEEEEEE-CCCEeeecCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEEcceeEEEECCCC
Confidence 345678999984 45554 4688887 22 2224788999999 8999999999954333
No 143
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=69.78 E-value=7 Score=36.04 Aligned_cols=51 Identities=20% Similarity=0.305 Sum_probs=35.8
Q ss_pred eEEeEEEeeCCCce--eceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCc
Q 002258 221 YEIRGLVVAQGNPI--LGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV 281 (946)
Q Consensus 221 ~~v~G~V~~~G~Pi--~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~L 281 (946)
..|.|++.-.++|. .+|.|.|+..+... ...-..+..+.||++|+|.+.+-
T Consensus 5 V~V~G~L~C~~~Pa~~~~V~V~L~d~~~~~----------~d~Ddll~~~~Td~~G~F~l~G~ 57 (117)
T 3uaf_A 5 LMATGVLKCPTDPEAVKKVHIDLWDAAAAA----------AESDDLMGRTWSDRNGNFQVTGC 57 (117)
T ss_dssp EEEEEEEECTTCGGGGSSCEEEEEEHHHHH----------TTSCCEEEEEECCTTSEEEEEEE
T ss_pred EEEEEEEEeCCccCCCCCEEEEEEeccccc----------CCchHhheeeEECCCCEEEEEEE
Confidence 36789999889985 48999999732100 00012467899999999999753
No 144
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=68.35 E-value=23 Score=33.37 Aligned_cols=45 Identities=29% Similarity=0.468 Sum_probs=32.1
Q ss_pred CCCcceEEEEEeCCCcEEEEEEe--CCCceEEE--c-------cccCceEEEEEec
Q 002258 146 GGPSNVNVELLSHSGDLISSVIT--SSEGSYLF--K-------NIIPGKYKLRASH 190 (946)
Q Consensus 146 ~plaGv~V~L~~~~g~~v~~ttT--d~~G~f~f--~-------~l~pG~Y~l~~~~ 190 (946)
.+...++|++++.+|+++++... -+.|.+.| + .+++|.|++++.+
T Consensus 34 ~~a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a 89 (138)
T 3osv_A 34 VSSSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQT 89 (138)
T ss_dssp BCEEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred CCCcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEE
Confidence 34567999999999988776532 35675444 4 3889999988754
No 145
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=67.16 E-value=1.3e+02 Score=31.67 Aligned_cols=130 Identities=12% Similarity=0.180 Sum_probs=59.7
Q ss_pred ceEEEEEeCCCCEEEEEEeCCCcEEE---cCCCCCccEEEEEEcCCCcccCCceeEEEEcCCCcCCCceeeEEEeCcEEE
Q 002258 53 HVTVELRTLDGLVKESTQCAPNGYYF---IPVYDKGSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRFTGFTLL 129 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~~nG~y~---ip~l~~G~Y~l~v~~P~G~~~~p~~v~v~vd~~~~s~~~dinf~~~g~~Is 129 (946)
+++|.+..+.+..+.-.+ ..||.|. .|- .+|.|.|.+.--. -...-.+..+.|.+.. ++.- .+.
T Consensus 38 ~l~v~i~~p~~~~~~~~d-~~dGty~v~y~p~-~~G~y~i~V~~~g-~~i~gSPf~v~v~~~~-----~v~~-----~~~ 104 (288)
T 2j3s_A 38 GLSLSIEGPSKVDINTED-LEDGTCRVTYCPT-EPGNYIINIKFAD-QHVPGSPFSVKVTGEG-----RVKE-----SIT 104 (288)
T ss_dssp CEEEEEESSSCCEEEEEE-CTTSEEEEEEECS-SCEEEEEEEEETT-EECTTCSEEEEEESCC-----SEEE-----EEE
T ss_pred cEEEEEECCCCceeEEEE-CCCCEEEEEEECC-CCeEEEEEEEECC-EECCCCCEEEEEcCCc-----cccc-----eec
Confidence 566666655553332222 3488887 354 7999999887532 2222122334443320 1110 111
Q ss_pred eEEEe----ccCCccc---cCCCCCCcceEEEEEeCCCcEEEE-EEeCCCceEEEc--cccCceEEEEEecCCceE
Q 002258 130 GRVVG----AIGGESC---LDKGGGPSNVNVELLSHSGDLISS-VITSSEGSYLFK--NIIPGKYKLRASHPNLSV 195 (946)
Q Consensus 130 G~V~~----~~g~~s~---~~~g~plaGv~V~L~~~~g~~v~~-ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~ 195 (946)
+.... ..|...+ ...+.+....++++.+.+|..... ..-..+|.|.+. ....|.|.|.+...|..+
T Consensus 105 ~~~~~~~~~~vg~~~~~~~~~~~~~~~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~g~~i 180 (288)
T 2j3s_A 105 RRRRAPSVANVGSHCDLSLKIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQHV 180 (288)
T ss_dssp EEECCCCCCSCCSSCCC--------CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEETTEEC
T ss_pred ccccCCCccccCcceEEEEEcCCCCcCceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEECCeeC
Confidence 11100 0010000 001233455677788888755433 333477877655 445799999998777654
No 146
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=67.10 E-value=23 Score=31.22 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=33.1
Q ss_pred CCCcc--eEEEEEeCCCcEEEE--EEeCCCceEEEc-----cccCceEEEEEecC
Q 002258 146 GGPSN--VNVELLSHSGDLISS--VITSSEGSYLFK-----NIIPGKYKLRASHP 191 (946)
Q Consensus 146 ~plaG--v~V~L~~~~g~~v~~--ttTd~~G~f~f~-----~l~pG~Y~l~~~~~ 191 (946)
.|+.+ ++|+|.+++|..+.+ ..++.+|.|.++ +.+.|.|+|++...
T Consensus 31 ~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 31 HPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp CBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred cCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 34443 478899999977654 566888988764 23569999999764
No 147
>2l4o_A Cell WALL surface anchor family protein; RRGB, pilus, cell adhesion; NMR {Streptococcus pneumoniae}
Probab=64.35 E-value=2.9 Score=41.59 Aligned_cols=23 Identities=35% Similarity=0.596 Sum_probs=20.8
Q ss_pred EeCCCceEEEcccc-Cce-EEEEEec
Q 002258 167 ITSSEGSYLFKNII-PGK-YKLRASH 190 (946)
Q Consensus 167 tTd~~G~f~f~~l~-pG~-Y~l~~~~ 190 (946)
+|+++| ..|.+++ .|. |.|.+.+
T Consensus 103 ~T~~dG-~~F~~l~~~G~~Yl~vE~~ 127 (181)
T 2l4o_A 103 LTEAEG-AKFNTANLPAAKYKIYEIH 127 (181)
T ss_dssp ECCSSC-EEEECTTSCSSEEEEEECT
T ss_pred eeCCCC-EEeecCccCCceEEEEEcc
Confidence 789999 9999998 899 9999965
No 148
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=61.65 E-value=1.3e+02 Score=29.80 Aligned_cols=121 Identities=18% Similarity=0.329 Sum_probs=70.5
Q ss_pred CCCCcceEEEEEeCCCcEEEE--EEeCCCceEEEccccC---c---eEEEEEe-cCCceEEeeccEEEEEccCCeeeeee
Q 002258 145 GGGPSNVNVELLSHSGDLISS--VITSSEGSYLFKNIIP---G---KYKLRAS-HPNLSVEVRGSTEVELGFENGEVDDI 215 (946)
Q Consensus 145 g~plaGv~V~L~~~~g~~v~~--ttTd~~G~f~f~~l~p---G---~Y~l~~~-~~g~~~~~~~~~~v~v~~~~~~v~~~ 215 (946)
+..+.-++|.|+. +|..+.+ .+.+.+-.|+|.+||- | .|+|.+. -+||.....+ ..|+ +.
T Consensus 19 g~rp~~i~v~L~~-~G~~~~~~~l~~~~~W~~~F~~Lp~y~~G~~i~YtV~E~~v~gY~~~i~G-~~IT---------Nt 87 (187)
T 1d2o_A 19 GKRPEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDING-TTIT---------NK 87 (187)
T ss_dssp SCCCSEEEEEEEE-TTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEEEEET-TEEE---------EE
T ss_pred CCCCceEEEEEEE-CCeEeeeEEEecCCCcEEEECCCcccCCCCEEEEEEEeCCCCCcEEeecc-EEEE---------cc
Confidence 5667889999987 4644433 3345677899999985 4 6999985 4788755332 1221 11
Q ss_pred eeccceEEeEE-EeeC-----CCceeceEEEEEECCCCcccCCCCCCCccCccceeeEEEecCCceEEECCcCC---e--
Q 002258 216 FFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPC---G-- 284 (946)
Q Consensus 216 l~v~g~~v~G~-V~~~-----G~Pi~Ga~V~L~~~~~~~~~c~~g~~~~~~~g~~~~~~~TD~~G~f~f~~Lp~---G-- 284 (946)
.......|.++ +..+ |..-..++|.|+.. +..+ +. ......+.+-.|.|.+||. |
T Consensus 88 ~~P~~~~i~V~K~W~d~~~~~~~rP~~I~v~L~~d-G~~~------------g~-~~~l~~~n~W~~tf~~Lp~~~~G~~ 153 (187)
T 1d2o_A 88 YTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQD-GKAT------------GK-TAILNESNNWTHTWTGLDEKAKGQQ 153 (187)
T ss_dssp ECTTEEEEEEEEEEESSTTSSSCCCSCEEEEEEET-TEEE------------EE-EEEESGGGTTEEEEEEEESEETTEE
T ss_pred ccCccccceeeEEEcCCCCccCCCCceEEEEEEeC-CeEe------------ce-EEEEecCCceEEEEcCCCccCCCCE
Confidence 11122345543 3443 22225699999985 2110 00 0112234578999999985 3
Q ss_pred -eEEEEE
Q 002258 285 -QYELVP 290 (946)
Q Consensus 285 -~Y~v~~ 290 (946)
.|+|.+
T Consensus 154 i~YtV~E 160 (187)
T 1d2o_A 154 VKYTVEE 160 (187)
T ss_dssp CCEEEEE
T ss_pred EEEEEEE
Confidence 488877
No 149
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=60.44 E-value=16 Score=34.49 Aligned_cols=44 Identities=25% Similarity=0.483 Sum_probs=32.2
Q ss_pred CCcceEEEEEeCCCcEEEEEE--eCCCceEEEc--c-------ccCceEEEEEec
Q 002258 147 GPSNVNVELLSHSGDLISSVI--TSSEGSYLFK--N-------IIPGKYKLRASH 190 (946)
Q Consensus 147 plaGv~V~L~~~~g~~v~~tt--Td~~G~f~f~--~-------l~pG~Y~l~~~~ 190 (946)
+...++|++++.+|+++++.. .-+.|.+.|. + ++||.|++++..
T Consensus 37 ~a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a 91 (138)
T 3c12_A 37 SAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQ 91 (138)
T ss_dssp SSEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEE
Confidence 456789999999998877643 4566776664 2 788999988753
No 150
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=60.30 E-value=46 Score=31.24 Aligned_cols=13 Identities=23% Similarity=0.598 Sum_probs=10.8
Q ss_pred EcCeeEEEEEEee
Q 002258 448 VPPGEYRLSAMAA 460 (946)
Q Consensus 448 l~pG~Y~v~~~~~ 460 (946)
++||.|++++...
T Consensus 80 ~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 80 MAAGKYGITATQT 92 (138)
T ss_dssp CCSEEEEEEEEEE
T ss_pred CCCceEEEEEEEE
Confidence 6789999998875
No 151
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=59.32 E-value=24 Score=31.52 Aligned_cols=49 Identities=10% Similarity=0.148 Sum_probs=36.9
Q ss_pred cccceEEEEEeC-CCCEEEEEEeCCCcEEE--cCCCCCccEEEEEEcCCCcc
Q 002258 50 DYSHVTVELRTL-DGLVKESTQCAPNGYYF--IPVYDKGSFVIKVNGPEGWS 98 (946)
Q Consensus 50 ~~sgv~V~L~~~-~G~~~~~t~t~~nG~y~--ip~l~~G~Y~l~v~~P~G~~ 98 (946)
.++.|+|.+.+. .|..+++-.-..-.... ++.-.+|.|+|++....+|.
T Consensus 43 ~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~~~L 94 (101)
T 3sd2_A 43 AKDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILNDCLL 94 (101)
T ss_dssp CCSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETTEEE
T ss_pred CCCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCCcEE
Confidence 356899999997 59999886443323455 56667999999999988664
No 152
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=57.01 E-value=2e+02 Score=30.39 Aligned_cols=103 Identities=11% Similarity=0.196 Sum_probs=51.0
Q ss_pred eCCCceEEEcccCCce-EEEEEEeccce-ecceeeEE-E-ccCcceeceEEEeee---EEEEEEEEcC---CcccEEEEE
Q 002258 355 TDRDGYYKLDQVTSNR-YTIEAVKVHYK-FNKLKEYM-V-LPNMASIADIKAISY---DICGVVRTVG---SGNKVKVAL 424 (946)
Q Consensus 355 TD~~G~f~~~~L~pG~-Y~I~a~~~~y~-~~~~~~v~-v-~p~~~~i~dI~~~~~---~v~G~V~~~~---~~~~a~VtL 424 (946)
....-.|.+.+|.||+ |.+++.+-.-. ........ . .|..+ .++.+... +| .|.-.. ......|..
T Consensus 235 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P--~~l~~~~~~~~sv--~l~W~~p~~~i~~Y~v~~ 310 (368)
T 1fnf_A 235 PHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVP--RDLEVVAATPTSL--LISWDAPAVTVRYYRITY 310 (368)
T ss_dssp ETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCSC--EEEEEEEEETTEE--EEEEECCSSCCSEEEEEE
T ss_pred CCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCCC--CeeEEEecCCCEE--EEEeeCCCCccceEEEEE
Confidence 3455689999999996 88887653311 11110111 1 11111 12322211 11 122111 234556666
Q ss_pred EeCCCccc-ceeeeeCCceEEEEE-EcCee-EEEEEEeeC
Q 002258 425 THGPDKVK-PQVKQTDNNGNFCFE-VPPGE-YRLSAMAAT 461 (946)
Q Consensus 425 ~~~~~~~~-~~~~~Td~~G~F~f~-l~pG~-Y~v~~~~~~ 461 (946)
....+... .........-.|.+. |.||+ |.+++.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~ 350 (368)
T 1fnf_A 311 GETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVT 350 (368)
T ss_dssp EETTCCSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEEC
T ss_pred EECCCCCccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeC
Confidence 53222111 112233455688998 99998 999988754
No 153
>2l4o_A Cell WALL surface anchor family protein; RRGB, pilus, cell adhesion; NMR {Streptococcus pneumoniae}
Probab=56.34 E-value=7.5 Score=38.64 Aligned_cols=25 Identities=16% Similarity=0.337 Sum_probs=21.7
Q ss_pred EEecCCceEEECCcC-Cee-EEEEEEEc
Q 002258 268 AVSDADGKFMFKSVP-CGQ-YELVPHYK 293 (946)
Q Consensus 268 ~~TD~~G~f~f~~Lp-~G~-Y~v~~~~~ 293 (946)
.+|+++| ..|.+|+ .|. |.|.+...
T Consensus 102 ~~T~~dG-~~F~~l~~~G~~Yl~vE~~~ 128 (181)
T 2l4o_A 102 KLTEAEG-AKFNTANLPAAKYKIYEIHS 128 (181)
T ss_dssp EECCSSC-EEEECTTSCSSEEEEEECTT
T ss_pred eeeCCCC-EEeecCccCCceEEEEEccC
Confidence 4899999 9999999 899 99999633
No 154
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=55.48 E-value=34 Score=30.04 Aligned_cols=43 Identities=14% Similarity=0.018 Sum_probs=31.0
Q ss_pred ceEEEEEeCCCCEEEEE--EeCCCcEEE----cCC-CCCccEEEEEEcCC
Q 002258 53 HVTVELRTLDGLVKEST--QCAPNGYYF----IPV-YDKGSFVIKVNGPE 95 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t--~t~~nG~y~----ip~-l~~G~Y~l~v~~P~ 95 (946)
-++|+|.|++|..+.+. .++.+|.|. +|- ...|.|.|++....
T Consensus 37 ~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 37 IPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp EEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred ceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 36899999999988773 344567654 433 35799999988754
No 155
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=54.78 E-value=1.4e+02 Score=28.09 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=55.8
Q ss_pred CceEEEEE-EcCee-EEEEEEeeCCCCCCceEEcCCeEEEEE-c--CcccceEEEEee-eEEEEEEEeccCCC--CceEE
Q 002258 440 NNGNFCFE-VPPGE-YRLSAMAATPESSSGILFLPPYADVVV-K--SPLLNIEFSQAL-VNVLGNVACKERCG--PLVTV 511 (946)
Q Consensus 440 ~~G~F~f~-l~pG~-Y~v~~~~~~~e~~~G~~~~p~~~~V~V-~--~pv~~i~F~q~~-a~V~G~V~~~~~~~--~~~~V 511 (946)
..-.|.+. |.||+ |.+++.+... .+. -.| ..+.+ . .+..++...... .+|. |......+ .+-.|
T Consensus 56 ~~~~~~i~~L~p~t~Y~~~V~a~~~---~~~-s~~--~~~~~~t~p~~P~~l~~~~~~~~sv~--l~W~~p~~~i~~Y~v 127 (186)
T 1qr4_A 56 DSTSFILRGLDAGTEYTISLVAEKG---RHK-SKP--TTIKGSTVVGSPKGISFSDITENSAT--VSWTPPRSRVDSYRV 127 (186)
T ss_dssp TCSEEEEESCCSSCEEEEEEEEESS---SCB-CCC--EEEEEECCCCCCSCEEEESCCSSCEE--EEECCCSSCCSEEEE
T ss_pred CCCEEEECCCCCCCEEEEEEEEEcC---Ccc-CCC--EEEEEECCCCCCCccEEEEeCCCEEE--EEEECCCCcccEEEE
Confidence 44678999 99997 8888887532 121 122 23333 1 344455554311 1222 33332111 13344
Q ss_pred EEEEcCcccccCCcceeEEEeeCCccEEEcccCCcc-EEEEEEe
Q 002258 512 TLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGK-YRLEVKR 554 (946)
Q Consensus 512 tL~~~~~~~~~~~~~~~~~~t~~~G~f~f~~v~PG~-Y~v~v~~ 554 (946)
.....++. ......+....-.|.+.+|.||+ |++++..
T Consensus 128 ~~~~~~~~-----~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 166 (186)
T 1qr4_A 128 SYVPITGG-----TPNVVTVDGSKTRTKLVKLVPGVDYNVNIIS 166 (186)
T ss_dssp EEEETTCC-----CCEEEEEETTCCEEEECSCCSSCEEEEEEEE
T ss_pred EEEeCCCC-----CceEEEcCCCcCEEEEcCCCCCCEEEEEEEE
Confidence 44443332 22334445567899999999996 9999985
No 156
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=54.64 E-value=1.8e+02 Score=29.32 Aligned_cols=40 Identities=18% Similarity=0.314 Sum_probs=25.5
Q ss_pred eeeceEEEE---ccE--EeeEeCCCceEEEcccCCce-EEEEEEec
Q 002258 339 GVEGVKILV---DGH--ERSITDRDGYYKLDQVTSNR-YTIEAVKV 378 (946)
Q Consensus 339 pl~ga~V~l---~G~--~~~~TD~~G~f~~~~L~pG~-Y~I~a~~~ 378 (946)
++.+-.|.. ++. ........-.|.+.+|.||+ |.+++.+-
T Consensus 223 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 268 (283)
T 1tdq_A 223 PIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAE 268 (283)
T ss_dssp CCSEEEEEEECSSSCCEEEEEESSCSEEEECCCCTTCCEEEEEEEE
T ss_pred cccEEEEEEEcCCCCeeEEEeCCCccEEEECCCCCCCEEEEEEEEE
Confidence 455555655 222 12233445579999999997 99887653
No 157
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=53.83 E-value=14 Score=35.81 Aligned_cols=79 Identities=18% Similarity=0.323 Sum_probs=43.0
Q ss_pred ccEEEccc---CCccEEEEEEeeccccccCCCCeeEe----eeeEEEEeecCccccceEEEeeeEEEEEecceeeEEEEe
Q 002258 536 DQFLFRDV---LPGKYRLEVKRTSREASSMEDNWCWE----QSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQ 608 (946)
Q Consensus 536 G~f~f~~v---~PG~Y~v~v~~~~~~~~~~~~~~cw~----~~~~~v~V~~~~~~~i~f~q~Gy~~~i~~sh~~~~~~~~ 608 (946)
+...|.+| ..|.|.|.+++..++... .|-|. ...+.|.|.......+.|-.+|=|-.
T Consensus 47 ~~vtf~~V~~~~aG~Y~l~irYang~~~~---~~~y~~~~~~r~~~v~VNG~~~~~v~fp~Tg~W~~------------- 110 (156)
T 2wz8_A 47 NYLQFNNVYVPQAGTYRMVVQFANAEVFG---QHSYNNNVVDRYCSISVNGGPEKGHYFFNTRGWNT------------- 110 (156)
T ss_dssp SCEEEEEEEESSCEEEEEEEEEECCCBC----------CBCCEEEEEEETTCCCEEEEECCCSSTTC-------------
T ss_pred CEEEEEEEecCCCcEEEEEEEEECCCccc---ccccCCccCcceEEEEECCceeeEEEeCCCCCCCc-------------
Confidence 44555433 379999999986432221 24444 56777877654434455554432110
Q ss_pred eCCCeeeEEecccceeEEecCC
Q 002258 609 QDGSHVPLKVKKGSQHICVESP 630 (946)
Q Consensus 609 ~~~~~~~~~l~~G~~~~cv~~~ 630 (946)
.....+.+.|++|.|.|-+...
T Consensus 111 ~~~~tv~V~L~aG~NtI~~~~~ 132 (156)
T 2wz8_A 111 YRTDIIDVYLNAGNNTIRFYNG 132 (156)
T ss_dssp CEEEEEEEEECSEEEEEEEECC
T ss_pred ceEEEEEEEECCCceEEEEEec
Confidence 0011235789999999988654
No 158
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=52.43 E-value=48 Score=34.38 Aligned_cols=56 Identities=20% Similarity=0.345 Sum_probs=40.9
Q ss_pred eEEEeeEEEeEEEcC-CCCeee------ceEEEE--c--c---EE--eeEeCCCceEEEcccCCceEEEEEE
Q 002258 321 FQVTGFSVGGRVVDE-NDMGVE------GVKILV--D--G---HE--RSITDRDGYYKLDQVTSNRYTIEAV 376 (946)
Q Consensus 321 f~~~g~sV~G~V~d~-~G~pl~------ga~V~l--~--G---~~--~~~TD~~G~f~~~~L~pG~Y~I~a~ 376 (946)
+..+...+.|+|+|. +|++|. |++|.| . | .. -.....||.|+=.-|=.|+|.|...
T Consensus 5 YDeP~s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 5 YEEPSETIWGEVVDEATGKRVLTDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp ---CCEEEEEEEEETTTCCBCCCCSSTTSCEEEEEECCSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEE
T ss_pred CCCCcceeEEEEEECCCCCEeeeccCCCceEEEEEecccccCCCccCCEEECCCCceeeeeEEcceeEEEeC
Confidence 444556899999996 677763 588888 1 1 11 2378899999966899999999987
No 159
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=50.29 E-value=34 Score=31.01 Aligned_cols=51 Identities=12% Similarity=0.196 Sum_probs=36.4
Q ss_pred CCCCcceEEEEE-eCCCcEEEE-EEeCCCc-e--EEEccccCceEEEEEecC-CceE
Q 002258 145 GGGPSNVNVELL-SHSGDLISS-VITSSEG-S--YLFKNIIPGKYKLRASHP-NLSV 195 (946)
Q Consensus 145 g~plaGv~V~L~-~~~g~~v~~-ttTd~~G-~--f~f~~l~pG~Y~l~~~~~-g~~~ 195 (946)
..++..|+|++. +..|+++.+ +.+.+.| . +.+.+..+|.|.|...+. +..+
T Consensus 45 ~~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~~~~l 101 (108)
T 3d33_A 45 ASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTPSGHL 101 (108)
T ss_dssp SSCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEESSCEE
T ss_pred CCcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCCCCEE
Confidence 479999999999 677877654 4444433 3 445566799999999877 5443
No 160
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=47.42 E-value=25 Score=30.93 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=35.7
Q ss_pred EEEeEEEcCCCCeee-ceEEEE-ccEEeeEeCCCceEEEcccCC-ceEEE
Q 002258 327 SVGGRVVDENDMGVE-GVKILV-DGHERSITDRDGYYKLDQVTS-NRYTI 373 (946)
Q Consensus 327 sV~G~V~d~~G~pl~-ga~V~l-~G~~~~~TD~~G~f~~~~L~p-G~Y~I 373 (946)
.+--++.+++|+|++ ||.|.- +|+.+...+.+|..-++++++ |+..|
T Consensus 9 ~~ll~l~~~dG~plPfGA~V~d~~g~~~giVG~~G~vyl~gl~~~g~L~V 58 (94)
T 3l48_A 9 RLFAILRLADGSQPPFGASVTSEKGRELGMVADEGLAWLSGVTPGETLSV 58 (94)
T ss_dssp CEEEEEEETTSCCCCTTCEEECTTCCEEEEBCGGGEEEESSCCTTCEEEE
T ss_pred EEEEEEECCCCCcCCCccEEEcCCCceEEEECCCCEEEEECCCCCCEEEE
Confidence 334467788899998 888865 567778999999999999976 44444
No 161
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=45.82 E-value=25 Score=33.17 Aligned_cols=42 Identities=17% Similarity=0.223 Sum_probs=30.4
Q ss_pred cceEEEEEeCCCCEEEEEEe--CCCcEE--EcC-------CCCCccEEEEEEc
Q 002258 52 SHVTVELRTLDGLVKESTQC--APNGYY--FIP-------VYDKGSFVIKVNG 93 (946)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t--~~nG~y--~ip-------~l~~G~Y~l~v~~ 93 (946)
..++|+++|.+|.++.+..- .+-|.+ .-+ .+++|.|++++.+
T Consensus 37 ~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a 89 (138)
T 3osv_A 37 SNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQT 89 (138)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred cEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEE
Confidence 47899999999999888643 345644 333 2578999988765
No 162
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=44.75 E-value=2.2e+02 Score=27.38 Aligned_cols=105 Identities=13% Similarity=0.209 Sum_probs=50.8
Q ss_pred EecCCceEEECCcCCe-eEEEEEEEcCCceEEEecCceEEEEEeccceeeeceeEEEe---eEEEeEEEcCCCCeeeceE
Q 002258 269 VSDADGKFMFKSVPCG-QYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTG---FSVGGRVVDENDMGVEGVK 344 (946)
Q Consensus 269 ~TD~~G~f~f~~Lp~G-~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g---~sV~G~V~d~~G~pl~ga~ 344 (946)
.....-.|.+.+|.|| .|.+.+........ -.|. .+....... -+..+.+.. -+|.=.-..+.+.++.+-.
T Consensus 72 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~--s~~~--~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~ 146 (203)
T 2gee_A 72 VDSSVGYYTVTGLEPGIDYDISVYTVKNGGE--STPT--TLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFL 146 (203)
T ss_dssp EETTCCEEEECSCCTTCEEEEEEEEESSSCB--CCCE--EEEEECCCC-CCEEEEEEEEETTEEEEEEECCSSCCCSEEE
T ss_pred cCCCccEEEeCCCCCCCEEEEEEEEEeCCCc--cccE--eeeecCCCc-CCCceEEEEcCCCEEEEEEcCCCCCCccEEE
Confidence 3445668999999999 58877643221100 0111 111111000 011122111 1121111112233666666
Q ss_pred EEE---ccE----EeeEeCCCceEEEcccCCce-EEEEEEec
Q 002258 345 ILV---DGH----ERSITDRDGYYKLDQVTSNR-YTIEAVKV 378 (946)
Q Consensus 345 V~l---~G~----~~~~TD~~G~f~~~~L~pG~-Y~I~a~~~ 378 (946)
|.. ++. ........-.|.+.+|.||+ |.+++.+-
T Consensus 147 v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 188 (203)
T 2gee_A 147 VRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSV 188 (203)
T ss_dssp EEEEETTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred EEEEECCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEe
Confidence 665 221 11233355689999999997 98887763
No 163
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=44.55 E-value=2e+02 Score=26.93 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=27.1
Q ss_pred CCcceEEEEEeCCCcEEEEEEeCCCceEEEccccCc-eEEEEEec
Q 002258 147 GPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPG-KYKLRASH 190 (946)
Q Consensus 147 plaGv~V~L~~~~g~~v~~ttTd~~G~f~f~~l~pG-~Y~l~~~~ 190 (946)
++.|-.|.....++...........-.|.+.+|.|| .|.+++.+
T Consensus 33 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 77 (186)
T 1qr4_A 33 KFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVA 77 (186)
T ss_dssp CCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEE
T ss_pred CccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEE
Confidence 445555555544444333333445568999999999 48877654
No 164
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=42.77 E-value=1.6e+02 Score=26.21 Aligned_cols=52 Identities=12% Similarity=0.245 Sum_probs=38.5
Q ss_pred CCCCcceEEEEEeC-CCcEEEEEEeCCCceEEEc--cccCceEEEEEecCCceEE
Q 002258 145 GGGPSNVNVELLSH-SGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVE 196 (946)
Q Consensus 145 g~plaGv~V~L~~~-~g~~v~~ttTd~~G~f~f~--~l~pG~Y~l~~~~~g~~~~ 196 (946)
..+++.|+|++.+. .|+.+.+-+--......++ +-..|.|.|...+..+.+.
T Consensus 41 ~~~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~~~Lt 95 (101)
T 3sd2_A 41 GRAKDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILNDCLLE 95 (101)
T ss_dssp SSCCSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETTEEEE
T ss_pred ccCCCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCCcEEE
Confidence 46899999999987 5888776544444456665 3357899999998887654
No 165
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=42.35 E-value=2.7e+02 Score=28.85 Aligned_cols=70 Identities=23% Similarity=0.386 Sum_probs=43.9
Q ss_pred EEEeCcEEEeEEEeccCCccccCCCCCCcceEEEEEeCC-C---cEEEEEEeCCCceEEEccccCceEEEEEecC
Q 002258 121 FRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS-G---DLISSVITSSEGSYLFKNIIPGKYKLRASHP 191 (946)
Q Consensus 121 f~~~g~~IsG~V~~~~g~~s~~~~g~plaGv~V~L~~~~-g---~~v~~ttTd~~G~f~f~~l~pG~Y~l~~~~~ 191 (946)
+.-.-..++|+|++...|+.. .+..+-.|++|+|+..+ + ..+.......||.|+=..|=.|+|.|....|
T Consensus 5 YDeP~s~l~G~ivd~~tGE~i-~~~~g~~gv~i~l~E~g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~Gp 78 (249)
T 4eiu_A 5 YEEPSETIWGEVVDEATGKRV-LTDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRIDGP 78 (249)
T ss_dssp ---CCEEEEEEEEETTTCCBC-CCCSSTTSCEEEEEECCSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEESS
T ss_pred CCCCcceeEEEEEECCCCCEe-eeccCCCceEEEEEecccccCCCccCCEEECCCCceeeeeEEcceeEEEeCCC
Confidence 333446789999885211111 11223357999998654 1 1111457789999996668999999999844
No 166
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.58 E-value=78 Score=27.80 Aligned_cols=43 Identities=14% Similarity=0.176 Sum_probs=32.4
Q ss_pred cccceEEEEEeCCCCEEEEEEeCC-CcEEE---cCCCCCccEEEEEEc
Q 002258 50 DYSHVTVELRTLDGLVKESTQCAP-NGYYF---IPVYDKGSFVIKVNG 93 (946)
Q Consensus 50 ~~sgv~V~L~~~~G~~~~~t~t~~-nG~y~---ip~l~~G~Y~l~v~~ 93 (946)
+-..+++++.+++|....-...+- ||.|. .|. .+|.|.|.++-
T Consensus 28 g~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~-e~G~h~v~V~~ 74 (95)
T 2ee9_A 28 RKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPT-EVGLHEMHIKY 74 (95)
T ss_dssp CTTSEEEEEECTTSCEECCEEEECSSSCEEEECCCC-SSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCCccccEEEeCCCCeEEEEEEec-CCEeEEEEEEE
Confidence 455789999999998765544444 89888 455 89999998874
No 167
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=41.06 E-value=20 Score=43.49 Aligned_cols=40 Identities=20% Similarity=0.369 Sum_probs=29.7
Q ss_pred eCCccEEEcccCCccEEEEEEeeccccccCCCCeeEe--eeeEEEEeec
Q 002258 533 DDSDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWE--QSFIGVDVGT 579 (946)
Q Consensus 533 ~~~G~f~f~~v~PG~Y~v~v~~~~~~~~~~~~~~cw~--~~~~~v~V~~ 579 (946)
....+..|++|+||+|+++|+.. +.+.-|. ..++.|.|.+
T Consensus 741 ~~~~~~~ytnL~pG~Y~f~V~a~-------n~~g~w~~~~~~l~i~I~P 782 (795)
T 4a2l_A 741 TDSRTVSYSNLPQGTYQFLVKAA-------NSDGKWNPIPTALEIIVLP 782 (795)
T ss_dssp SSCCEEEEECCCSEEEEEEEEEE-------CTTSCBCSSCEEEEEEECC
T ss_pred CCcCeEEecccCCCeEEEEEEEE-------CCCCccCCCceEEEEEEEC
Confidence 45677899999999999999865 4455664 4566777653
No 168
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=40.71 E-value=2.4e+02 Score=28.90 Aligned_cols=42 Identities=19% Similarity=0.423 Sum_probs=35.2
Q ss_pred CCCeeeceEEEEccEEeeEeCCCc-eEEEcccCCce-EEEEEEe
Q 002258 336 NDMGVEGVKILVDGHERSITDRDG-YYKLDQVTSNR-YTIEAVK 377 (946)
Q Consensus 336 ~G~pl~ga~V~l~G~~~~~TD~~G-~f~~~~L~pG~-Y~I~a~~ 377 (946)
++.+|.+-.|+-+|+.++..+.++ .|++.+|.|.+ |++++.+
T Consensus 176 ~~~GI~gY~ly~~g~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 176 TTEGLEGYILYKDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAA 219 (238)
T ss_dssp CCTTEEEEEEEETTEEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCCceeEEEEeCCceeEEeeccceEEEecCCCCCCEEEEEEEE
Confidence 455699999988998888888887 89999999987 8877765
No 169
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=40.37 E-value=30 Score=41.84 Aligned_cols=40 Identities=25% Similarity=0.585 Sum_probs=29.2
Q ss_pred eeCCccEEEcccCCccEEEEEEeeccccccCCCCeeEee--eeEEEEee
Q 002258 532 TDDSDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWEQ--SFIGVDVG 578 (946)
Q Consensus 532 t~~~G~f~f~~v~PG~Y~v~v~~~~~~~~~~~~~~cw~~--~~~~v~V~ 578 (946)
.....+..|++|+||+|+++|+.. +.+.-|.. .++.|.|.
T Consensus 734 ~~~~~~~~ytnL~pG~Y~f~V~a~-------~~~g~w~~~~~~l~i~I~ 775 (781)
T 3v9f_A 734 INEQNSVTFRNIPPGKYEFLVKAR-------LHNQDWSEDTTSLRIHIN 775 (781)
T ss_dssp ESSCSEEEECSCCSEEEEEEEEEE-------ETTSCCCSCCEEEEEEEC
T ss_pred cCCcceEEEcCCCCceEEEEEEEE-------CCCCccCCCceEEEEEEc
Confidence 445678999999999999999865 34455554 45666665
No 170
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=38.48 E-value=36 Score=29.81 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=30.7
Q ss_pred cceEEEEEeCCCCEEEEEEeCC-CcEEE---cCCCCCccEEEEEEc
Q 002258 52 SHVTVELRTLDGLVKESTQCAP-NGYYF---IPVYDKGSFVIKVNG 93 (946)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t~~-nG~y~---ip~l~~G~Y~l~v~~ 93 (946)
..+++++.+++|....-...+- ||.|. .|- .+|.|.|.+.-
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~-e~G~h~v~V~~ 66 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPT-EKGLHQMGIKY 66 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEECCS-SCEEEEEEEEE
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEEcc-CCEEEEEEEEE
Confidence 4688999999998655444444 89888 455 88999998774
No 171
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=36.85 E-value=23 Score=42.77 Aligned_cols=38 Identities=11% Similarity=0.252 Sum_probs=27.9
Q ss_pred CccEEEcccCCccEEEEEEeeccccccCCCCeeEee--eeEEEEeec
Q 002258 535 SDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWEQ--SFIGVDVGT 579 (946)
Q Consensus 535 ~G~f~f~~v~PG~Y~v~v~~~~~~~~~~~~~~cw~~--~~~~v~V~~ 579 (946)
..+..|++|+||+|+++|+.. +.+.-|.. .++.|.|.+
T Consensus 709 ~~~~~ytnL~pG~Y~f~V~a~-------~~~g~w~~~~~~l~I~I~P 748 (758)
T 3ott_A 709 INRITYSNLSYGNYQLIISKL-------ERDGQPSNRPHILNIRILP 748 (758)
T ss_dssp CCEEEECSCCSEEEEEEEEEB-------CTTSCBCSSCEEEEEEECC
T ss_pred cceEEecCCCCccEEEEEEEe-------CCCCCccCccEEEEEEECC
Confidence 456889999999999999964 44555654 556777653
No 172
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=36.51 E-value=63 Score=28.72 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=32.9
Q ss_pred ccceEEEEEeCCCCEEEEEEeCC-CcEEE---cCCCCCccEEEEEEcC
Q 002258 51 YSHVTVELRTLDGLVKESTQCAP-NGYYF---IPVYDKGSFVIKVNGP 94 (946)
Q Consensus 51 ~sgv~V~L~~~~G~~~~~t~t~~-nG~y~---ip~l~~G~Y~l~v~~P 94 (946)
-..+++++..++|....-...+- ||.|. .|- .+|.|.|.+.--
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~-e~G~h~v~V~~~ 76 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQ-EMGVHTVSVKYR 76 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCC-TTCEEEEEEESS
T ss_pred CCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEec-CCEeEEEEEEEC
Confidence 44789999999998766655544 89998 455 899999988753
No 173
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=35.57 E-value=54 Score=29.17 Aligned_cols=27 Identities=19% Similarity=0.418 Sum_probs=16.4
Q ss_pred ccccCceEEEEEe---cCCceEEeeccEEEEE
Q 002258 177 KNIIPGKYKLRAS---HPNLSVEVRGSTEVEL 205 (946)
Q Consensus 177 ~~l~pG~Y~l~~~---~~g~~~~~~~~~~v~v 205 (946)
..|++|+|+|... .+|... +++..|+|
T Consensus 72 ~~L~~G~YtV~WrvvS~DGH~~--~G~~~FtV 101 (102)
T 2c9r_A 72 SPLTAGTYKVDWRAVSSDTFPI--TGSVTFKV 101 (102)
T ss_dssp SCCCSEEEEEEEEECCTTCCCE--EEEEEEEE
T ss_pred CCCCCceEEEEEEEEecCCCcc--CCEEEEEE
Confidence 4688999999764 344432 34445544
No 174
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.42 E-value=83 Score=27.84 Aligned_cols=42 Identities=17% Similarity=0.194 Sum_probs=28.4
Q ss_pred ceEEEEEeCCC--CEEEEEEeCC-CcEEE--cCCCCCccEEEEEEcC
Q 002258 53 HVTVELRTLDG--LVKESTQCAP-NGYYF--IPVYDKGSFVIKVNGP 94 (946)
Q Consensus 53 gv~V~L~~~~G--~~~~~t~t~~-nG~y~--ip~l~~G~Y~l~v~~P 94 (946)
.++|++..+++ ..+.-...+. ||.|. +....+|+|.|.+.--
T Consensus 50 ~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~ 96 (113)
T 2ds4_A 50 NVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIK 96 (113)
T ss_dssp CEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEES
T ss_pred eEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 47888888775 3444444555 89888 3344789999988753
No 175
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=35.37 E-value=2.6e+02 Score=30.96 Aligned_cols=47 Identities=13% Similarity=0.107 Sum_probs=33.5
Q ss_pred eEEEeEEEcCCCCeeeceEEEEccEE-eeEeCCCceEEEcccCCceEEEEEEe
Q 002258 326 FSVGGRVVDENDMGVEGVKILVDGHE-RSITDRDGYYKLDQVTSNRYTIEAVK 377 (946)
Q Consensus 326 ~sV~G~V~d~~G~pl~ga~V~l~G~~-~~~TD~~G~f~~~~L~pG~Y~I~a~~ 377 (946)
..|+.+|.+..++.++.....+++.. ... .-.+.++.+|.|.|.+..
T Consensus 325 ~~v~~~v~d~~~~~~~~~~~~v~~~~~~~~-----tl~ls~~~aGhh~lvv~~ 372 (391)
T 2xwx_A 325 MSAELTVYNHHQKPLASWSQAMTDGELKSI-----TLELSEAKAGHHMLVSRI 372 (391)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECTTCEEEE-----EEECSCCCSEEEEEEEEE
T ss_pred eEEEEEEEcCCCCccceeeEEEcCCCcceE-----EEEccCCCCccEEEEEEE
Confidence 57888999999999998888773311 110 234568899999988765
No 176
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=34.31 E-value=3.2e+02 Score=26.15 Aligned_cols=41 Identities=12% Similarity=0.121 Sum_probs=27.4
Q ss_pred CeeeceEEEE--ccE-------EeeEeCCCceEEEcccCCce-EEEEEEec
Q 002258 338 MGVEGVKILV--DGH-------ERSITDRDGYYKLDQVTSNR-YTIEAVKV 378 (946)
Q Consensus 338 ~pl~ga~V~l--~G~-------~~~~TD~~G~f~~~~L~pG~-Y~I~a~~~ 378 (946)
.++.+-.|.. .+. ........-.|.+.+|.||+ |.+++.+-
T Consensus 136 g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 186 (211)
T 3p4l_A 136 GKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQAR 186 (211)
T ss_dssp SCCCEEEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEE
T ss_pred CCEEEEEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEE
Confidence 4677777766 111 11234456689999999997 99888763
No 177
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=32.88 E-value=36 Score=29.91 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=35.1
Q ss_pred eeEeeeeeEEEEEEecCCCCCccc-ceEEEEecCCccccccccCCCceEEecccCCCce
Q 002258 852 FSCQKLSQISVRIYSKDDAGEPIP-SVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNF 909 (946)
Q Consensus 852 F~a~kL~~i~v~v~d~~~~~~pl~-gvllsLsg~~~yR~n~~t~~~G~~~f~~L~PG~Y 909 (946)
|...+=-.+.+++.+.| |+||| |+.+.-..+ +...+.+++|.+-+.+|.+..-
T Consensus 2 F~t~~G~~~ll~l~~~d--G~plPfGA~V~d~~g---~~~giVG~~G~vyl~gl~~~g~ 55 (94)
T 3l48_A 2 FSVLKGKRLFAILRLAD--GSQPPFGASVTSEKG---RELGMVADEGLAWLSGVTPGET 55 (94)
T ss_dssp -----CCCEEEEEEETT--SCCCCTTCEEECTTC---CEEEEBCGGGEEEESSCCTTCE
T ss_pred cceEEEEEEEEEEECCC--CCcCCCccEEEcCCC---ceEEEECCCCEEEEECCCCCCE
Confidence 55555556778888876 89999 776643222 3457899999999999986543
No 178
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=32.55 E-value=1.3e+02 Score=26.19 Aligned_cols=23 Identities=17% Similarity=0.379 Sum_probs=15.5
Q ss_pred eeCCccEEEcccC--CccEEEEEEe
Q 002258 532 TDDSDQFLFRDVL--PGKYRLEVKR 554 (946)
Q Consensus 532 t~~~G~f~f~~v~--PG~Y~v~v~~ 554 (946)
-..+|+|.+.=.+ +|.|+|.+..
T Consensus 59 d~~dGty~V~Y~p~~~G~y~i~V~~ 83 (100)
T 3rgh_A 59 DHGDGTHTITYIPLCPGAYTVTIKY 83 (100)
T ss_dssp ECSSSEEEEEEECCSSEEEEEEEEE
T ss_pred eCCCCEEEEEEEeCCCeeEEEEEEE
Confidence 3456777664443 7889999874
No 179
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=31.46 E-value=5.6e+02 Score=28.17 Aligned_cols=71 Identities=10% Similarity=0.092 Sum_probs=40.0
Q ss_pred ccEEEEEEeeccccccCCCCeeEeeeeEEEEeecCccccceEEEeeeEEEEEeccee-----eEEEEeeCCCeeeEEe
Q 002258 546 GKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDV-----DAYMTQQDGSHVPLKV 618 (946)
Q Consensus 546 G~Y~v~v~~~~~~~~~~~~~~cw~~~~~~v~V~~~~~~~i~f~q~Gy~~~i~~sh~~-----~~~~~~~~~~~~~~~l 618 (946)
..|.|.+...+..+.. ..+..-....+.|.|.. +-+.+.|.|.-|.+.|.-..+. .+...++++..+.+.|
T Consensus 180 ~~y~l~V~A~D~g~~~-~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~dn~~i~Ysi 255 (419)
T 3ubh_A 180 MEYVLYVKAEDQNGKV-DDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTL 255 (419)
T ss_dssp CEEEEEEEEEEEEEEC---CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSSCCCCEEEE
T ss_pred cEEEEEEEEEECCCCc-cCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCCCCceEEEE
Confidence 4699988865322111 01112234455677765 5588999999999988665542 2233444444454554
No 180
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=31.38 E-value=65 Score=28.90 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=30.1
Q ss_pred cceEEEEEeCCCCEEEEEEeCC-CcEEE---cCCCCCccEEEEEEc
Q 002258 52 SHVTVELRTLDGLVKESTQCAP-NGYYF---IPVYDKGSFVIKVNG 93 (946)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t~~-nG~y~---ip~l~~G~Y~l~v~~ 93 (946)
..++|++..++|..+.....+. ||.|. .|- .+|.|.|.+.-
T Consensus 42 ~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~-~~G~y~i~V~~ 86 (113)
T 2dia_A 42 GALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPL-TAGMYTLTMKY 86 (113)
T ss_dssp CCEEEEEEETTTEECEEEEEECTTSEEEEEEECS-SCEEEEEEEEE
T ss_pred ccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeC-CCccEEEEEEE
Confidence 3678888888876655555555 89888 454 79999998874
No 181
>3g3l_A Putative uncharacterized membrane-associated PROT; YP_211325.1, putative membrane-associated protein of unknown function; 2.20A {Bacteroides fragilis nctc 9343}
Probab=30.39 E-value=43 Score=33.48 Aligned_cols=54 Identities=13% Similarity=0.226 Sum_probs=43.7
Q ss_pred eeEEEeEEEcC-CCCeeeceEEEEccEEee-EeCCCceEEEcccCCceEEEEEEeccceec
Q 002258 325 GFSVGGRVVDE-NDMGVEGVKILVDGHERS-ITDRDGYYKLDQVTSNRYTIEAVKVHYKFN 383 (946)
Q Consensus 325 g~sV~G~V~d~-~G~pl~ga~V~l~G~~~~-~TD~~G~f~~~~L~pG~Y~I~a~~~~y~~~ 383 (946)
.+-|.|.|.|. .|+-|.-|+|+|+|+.++ .-+.+|.|.-++ |.+.++..+|...
T Consensus 14 KYyIaGtiTdatTGq~LttAtVTlgg~sVt~~fN~~v~ykaeg-----yslvVsa~gYy~v 69 (327)
T 3g3l_A 14 KYYIAGTITDATTGQELTTAKVTLGDKSVTSSFNEQVNYKAEG-----YALVVSADGYYPV 69 (327)
T ss_dssp EEEEEEEEEETTTCCBCTTCEEEETTEEECSEEEEEECCCTTC-----EEEEEECTTBCCE
T ss_pred eEEEEEEeeeccccceEEEEEEEECCeEEeeeccceeeEeecC-----ceEEEEecCceee
Confidence 46788999997 799999999999999884 566778777654 9999999887443
No 182
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=30.14 E-value=5.1e+02 Score=27.25 Aligned_cols=73 Identities=11% Similarity=0.101 Sum_probs=41.2
Q ss_pred CccEEEEEEeeccccccCCCCeeEeeeeEEEEeecCccccceEEEeeeEEEEEeccee-----eEEEEeeCCCeeeEEec
Q 002258 545 PGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDV-----DAYMTQQDGSHVPLKVK 619 (946)
Q Consensus 545 PG~Y~v~v~~~~~~~~~~~~~~cw~~~~~~v~V~~~~~~~i~f~q~Gy~~~i~~sh~~-----~~~~~~~~~~~~~~~l~ 619 (946)
...|.|.+...+.++.. ..........+.|.|.. +-+.+.|.+.-|.+.|.-..+. .+...++++..+.+.|.
T Consensus 174 ~~~y~l~V~A~D~g~~~-~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~Dn~~i~Y~i~ 251 (316)
T 3ubf_A 174 DMEYVLYVKAEDQNGKV-DDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLK 251 (316)
T ss_dssp TCEEEEEEEEEESCC--------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTTCCCEEEEEE
T ss_pred CcEEEEEEEEEeCCCCC-CCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCCCCEEEEEEE
Confidence 45699998865332111 00112233455677765 6678999999999988665552 23334455545555554
No 183
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=29.29 E-value=1.8e+02 Score=25.86 Aligned_cols=23 Identities=22% Similarity=0.377 Sum_probs=15.4
Q ss_pred eeCCccEEEcccC--CccEEEEEEe
Q 002258 532 TDDSDQFLFRDVL--PGKYRLEVKR 554 (946)
Q Consensus 532 t~~~G~f~f~~v~--PG~Y~v~v~~ 554 (946)
-..+|+|.+.=.+ ||.|+|.+..
T Consensus 62 d~~dGty~v~Y~p~~~G~y~i~V~~ 86 (113)
T 2dia_A 62 NNKDGTYAVTYVPLTAGMYTLTMKY 86 (113)
T ss_dssp ECTTSEEEEEEECSSCEEEEEEEEE
T ss_pred ECCCCEEEEEEEeCCCccEEEEEEE
Confidence 3456777654333 8889999874
No 184
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=29.28 E-value=68 Score=28.16 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=28.1
Q ss_pred ceEEEEEeCCCCEEEEEEeCC-CcEEE---cCCCCCccEEEEEEc
Q 002258 53 HVTVELRTLDGLVKESTQCAP-NGYYF---IPVYDKGSFVIKVNG 93 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~~-nG~y~---ip~l~~G~Y~l~v~~ 93 (946)
.++|++.+++|..+.-...+- ||.|. .|- .+|.|.|.+.-
T Consensus 40 ~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~-~~G~y~i~V~~ 83 (100)
T 3rgh_A 40 ELTIEICSEAGLPAEVYIQDHGDGTHTITYIPL-CPGAYTVTIKY 83 (100)
T ss_dssp CEEEEEECTTSCBCEEEEEECSSSEEEEEEECC-SSEEEEEEEEE
T ss_pred eEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeC-CCeeEEEEEEE
Confidence 678888888886554444444 88887 344 78999887764
No 185
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=29.04 E-value=1.1e+02 Score=28.02 Aligned_cols=60 Identities=22% Similarity=0.263 Sum_probs=27.3
Q ss_pred CceeEeeeeeEEEEEEecCCCCCcccceEEEEecCCccccccccCCCc--eEEecccCCCceeeEe
Q 002258 850 NSFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGG--SFHFDNLFPGNFYLRP 913 (946)
Q Consensus 850 ~~F~a~kL~~i~v~v~d~~~~~~pl~gvllsLsg~~~yR~n~~t~~~G--~~~f~~L~PG~Y~lr~ 913 (946)
..|...+-+.|.|.+..+. +.-+.=+|.+-++-+.|-.=.. .+.. +-.| +|.||.|||+-
T Consensus 43 y~f~v~~~g~v~I~l~~~~--~~~~~w~ly~~~dl~nyv~y~~-~~gn~~~~~~-~~~pGkYYl~V 104 (119)
T 1nqj_A 43 YSFEVKEEGEVNIELDKKD--EFGVTWTLHPESNINDRITYGQ-VDGNKVSNKV-KLRPGKYYLLV 104 (119)
T ss_dssp EEEEESSCEEEEEEEEESS--SSEEEEEEEECC----CCEECE-EETTEEEEEE-EECSEEEEEEE
T ss_pred EEEECCCCCeEEEEEEeCC--CCCEEEEEEccCCCccceEEee-cCCCcEEEEE-EcCCcEEEEEE
Confidence 3455556666667666553 2223333444434222211110 1111 1134 47899999964
No 186
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=27.68 E-value=1e+02 Score=26.78 Aligned_cols=28 Identities=25% Similarity=0.516 Sum_probs=23.1
Q ss_pred eeEEEeeCCccEEEcccCCcc-EEEEEEe
Q 002258 527 KTVSLTDDSDQFLFRDVLPGK-YRLEVKR 554 (946)
Q Consensus 527 ~~~~~t~~~G~f~f~~v~PG~-Y~v~v~~ 554 (946)
..+.+....-++.+.+|.||. |+|++..
T Consensus 50 ~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 50 QYLDLPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp EEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEECCCCccEEEECCCCCCCEEEEEEEE
Confidence 345666678899999999998 9999974
No 187
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=27.29 E-value=1.4e+02 Score=27.25 Aligned_cols=22 Identities=18% Similarity=0.357 Sum_probs=15.3
Q ss_pred eCCccEEEcccC--CccEEEEEEe
Q 002258 533 DDSDQFLFRDVL--PGKYRLEVKR 554 (946)
Q Consensus 533 ~~~G~f~f~~v~--PG~Y~v~v~~ 554 (946)
..+|+|.+.=.+ ||.|+|.+..
T Consensus 64 ~~dGty~V~Y~p~~~G~y~I~V~~ 87 (124)
T 2dmb_A 64 NEDGTYDIFYTAAKPGTYVIYVRF 87 (124)
T ss_dssp CTTSCEEEEEECSSCEEEEEEEEE
T ss_pred CCCCEEEEEEEcCCCEEEEEEEEE
Confidence 356777754333 8999999884
No 188
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=27.13 E-value=67 Score=28.54 Aligned_cols=45 Identities=9% Similarity=-0.036 Sum_probs=26.4
Q ss_pred CccccceEEEEEeCCCCEEEE--------EEeCC-CcE-EE--cCCCCCccEEEEEE
Q 002258 48 RLDYSHVTVELRTLDGLVKES--------TQCAP-NGY-YF--IPVYDKGSFVIKVN 92 (946)
Q Consensus 48 ~i~~sgv~V~L~~~~G~~~~~--------t~t~~-nG~-y~--ip~l~~G~Y~l~v~ 92 (946)
+|......|+|++++|..+.. ...++ ++. +. ++.|.+|.|+|.-.
T Consensus 28 ~v~~~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~G~YtV~Wr 84 (102)
T 2c9r_A 28 NLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPKTMVITPASPLTAGTYKVDWR 84 (102)
T ss_dssp CCCGGGCEEEEEEEECC-----CEEECEEEEECSSTTEEEEEESSCCCSEEEEEEEE
T ss_pred CCccCccEEEEECCCCCeeeeccccccccceecCCCCcEEEEECCCCCCceEEEEEE
Confidence 444445678888888876554 33343 455 33 56779999999543
No 189
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.06 E-value=2e+02 Score=25.15 Aligned_cols=31 Identities=26% Similarity=0.445 Sum_probs=24.7
Q ss_pred eEEEecCCceEEECCcC--CeeEEEEEEEcCCc
Q 002258 266 CHAVSDADGKFMFKSVP--CGQYELVPHYKGEN 296 (946)
Q Consensus 266 ~~~~TD~~G~f~f~~Lp--~G~Y~v~~~~~~~~ 296 (946)
+..+-..||.|.+.=.| +|.|+|.+.+.+.+
T Consensus 46 ~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~ 78 (95)
T 2ee9_A 46 PEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSH 78 (95)
T ss_dssp CEEEECSSSCEEEECCCCSSEEEEEEEEESSCB
T ss_pred cEEEeCCCCeEEEEEEecCCEeEEEEEEECCEE
Confidence 45566788999887776 79999999888765
No 190
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=26.96 E-value=60 Score=28.94 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=28.3
Q ss_pred cceEEEEEeCCCCEEEEEEeCC-CcEEE--cCCCCCccEEEEEEc
Q 002258 52 SHVTVELRTLDGLVKESTQCAP-NGYYF--IPVYDKGSFVIKVNG 93 (946)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t~~-nG~y~--ip~l~~G~Y~l~v~~ 93 (946)
..++|++.+++|..+.....+. ||.|. +-...+|.|.|.+.-
T Consensus 43 ~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~ 87 (108)
T 2dj4_A 43 APLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKY 87 (108)
T ss_dssp CCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEE
T ss_pred ceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEE
Confidence 3578888888886544444444 88888 233378999988774
No 191
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=26.79 E-value=71 Score=28.52 Aligned_cols=28 Identities=11% Similarity=0.249 Sum_probs=16.7
Q ss_pred EccccCceEEEEEe---cCCceEEeeccEEEEE
Q 002258 176 FKNIIPGKYKLRAS---HPNLSVEVRGSTEVEL 205 (946)
Q Consensus 176 f~~l~pG~Y~l~~~---~~g~~~~~~~~~~v~v 205 (946)
+..|++|+|+|... .+|... +++..|+|
T Consensus 73 l~~L~~G~YtV~WrvvS~DGH~~--~G~~~FtV 103 (104)
T 1lyq_A 73 REPLPAGTYRVDWRAVSSDTHPI--TGNYTFTV 103 (104)
T ss_dssp SSCCCSEEEEEEEEECCTTSCCE--EEEEEEEE
T ss_pred CCCCCCceEEEEEEEEecCCCcc--CCEEEEEE
Confidence 34689999999764 344433 34445544
No 192
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=26.55 E-value=1.7e+02 Score=25.46 Aligned_cols=45 Identities=16% Similarity=0.318 Sum_probs=29.8
Q ss_pred ccccceEEEEEeCCCCEEEEEEeCCCcEEEcCCCCC----ccEEEEEEcCC
Q 002258 49 LDYSHVTVELRTLDGLVKESTQCAPNGYYFIPVYDK----GSFVIKVNGPE 95 (946)
Q Consensus 49 i~~sgv~V~L~~~~G~~~~~t~t~~nG~y~ip~l~~----G~Y~l~v~~P~ 95 (946)
+.-+.++|+++ .+|.+++++.. +-|-|.|..+.+ |+-.|.++.-+
T Consensus 22 iA~s~A~V~v~-qnG~~iy~~~V-ppGpF~I~dl~~~~~~Gdl~V~v~ead 70 (90)
T 3fcg_A 22 IARTQARVEVL-RDGYTVSNELV-PSGPFELANLPLGGGSGELKVIIHESD 70 (90)
T ss_dssp EESSSEEEEEE-SSSCEEEEEEE-CSEEEEECCCC---CCEEEEEEEECTT
T ss_pred EEcCCcEEEEE-ECCEEEEEeEe-CCCCeEEcCCcccCCceeEEEEEEECC
Confidence 34557889886 78999999987 556777665543 55555554433
No 193
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=24.80 E-value=3.4e+02 Score=26.68 Aligned_cols=82 Identities=20% Similarity=0.206 Sum_probs=47.6
Q ss_pred ccEEEEEEeeccccccCCCCeeEeeeeEEEEeecCccccceEEEeeeEEEEEeccee-----eEEEEeeCC------Cee
Q 002258 546 GKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDV-----DAYMTQQDG------SHV 614 (946)
Q Consensus 546 G~Y~v~v~~~~~~~~~~~~~~cw~~~~~~v~V~~~~~~~i~f~q~Gy~~~i~~sh~~-----~~~~~~~~~------~~~ 614 (946)
-.|.|.+...+.... .-......+.|.|...+-+.+.|.+.-|.+.|.-..+. .+...+++. ..+
T Consensus 67 ~~y~l~v~a~D~g~~----~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i 142 (203)
T 3ppe_A 67 AEYELTAHIIDRRNN----RSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATV 142 (203)
T ss_dssp CEEEEEEEEEETTTT----EECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCE
T ss_pred ceEEEEEEEEECCCC----CcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEE
Confidence 468888875432110 01233456778888777788999999999988765542 334444441 234
Q ss_pred eEEecccceeEEecCCc
Q 002258 615 PLKVKKGSQHICVESPG 631 (946)
Q Consensus 615 ~~~l~~G~~~~cv~~~G 631 (946)
.+.|..|...|.+-..|
T Consensus 143 ~Y~i~~~~~~F~I~~tG 159 (203)
T 3ppe_A 143 TYQIIKGNEYFTVDDSG 159 (203)
T ss_dssp EEEEEESTTTEEECTTS
T ss_pred EEEEeCCCCcEEEeCCe
Confidence 45555554444444333
No 194
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=24.74 E-value=59 Score=39.22 Aligned_cols=25 Identities=20% Similarity=0.562 Sum_probs=20.2
Q ss_pred EecCCceEEECCcCCeeEEEEEEEc
Q 002258 269 VSDADGKFMFKSVPCGQYELVPHYK 293 (946)
Q Consensus 269 ~TD~~G~f~f~~Lp~G~Y~v~~~~~ 293 (946)
.++.+.+..|.+||||+|++++...
T Consensus 733 ~~~~~~~~~ytnL~pG~Y~f~V~a~ 757 (781)
T 3v9f_A 733 TINEQNSVTFRNIPPGKYEFLVKAR 757 (781)
T ss_dssp EESSCSEEEECSCCSEEEEEEEEEE
T ss_pred CcCCcceEEEcCCCCceEEEEEEEE
Confidence 3456778999999999999988543
No 195
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=24.34 E-value=2.2e+02 Score=26.94 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=39.0
Q ss_pred ccEEEEEEeCCCcccceeeeeCCceEEEEE-E---cCeeEEEEEEeeCCCCCCceEEcCCeEEEEE
Q 002258 418 NKVKVALTHGPDKVKPQVKQTDNNGNFCFE-V---PPGEYRLSAMAATPESSSGILFLPPYADVVV 479 (946)
Q Consensus 418 ~~a~VtL~~~~~~~~~~~~~Td~~G~F~f~-l---~pG~Y~v~~~~~~~e~~~G~~~~p~~~~V~V 479 (946)
....++|...+.-+...+...+++|...|. + .||.|+-.+.-.. ....|+.|......|+|
T Consensus 24 ~~Fsf~L~~~dPmP~~~tvt~~a~G~v~F~~i~f~~~G~Y~YtI~E~~-G~~~gvtYD~~~y~VtV 88 (141)
T 3klq_A 24 TPFSVALESIDAMKTIEEITIAGSGKASFSPLTFTTVGQYTYRVYQKP-SQNKDYQADTTVFDVLV 88 (141)
T ss_dssp CEEEEEEEETTTTEEEEEEEEESSEEEECCCEEECSCEEEEEEEEECC-CSSTTEECCCCEEEEEE
T ss_pred ceEEEEEEeCCCCCCcEEEEEcCCCcEEeCceEeCCCEEEEEEEEEeC-CCCCCcEEcCCEEEEEE
Confidence 445666654331111235556788988885 4 7899877776532 34578999888877766
No 196
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=24.19 E-value=62 Score=39.11 Aligned_cols=42 Identities=12% Similarity=0.312 Sum_probs=26.5
Q ss_pred ecCCceEEECCcCCeeEEEEEEEcCCceEEEecCceEEEEEe
Q 002258 270 SDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVR 311 (946)
Q Consensus 270 TD~~G~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~~vtV~ 311 (946)
+..+.+..|.+||||+|++++......-.+.-.+..+.|.|.
T Consensus 740 ~~~~~~~~ytnL~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~ 781 (795)
T 4a2l_A 740 LTDSRTVSYSNLPQGTYQFLVKAANSDGKWNPIPTALEIIVL 781 (795)
T ss_dssp ESSCCEEEEECCCSEEEEEEEEEECTTSCBCSSCEEEEEEEC
T ss_pred CCCcCeEEecccCCCeEEEEEEEECCCCccCCCceEEEEEEE
Confidence 356778999999999999988544333222222344555543
No 197
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=24.12 E-value=67 Score=28.92 Aligned_cols=41 Identities=20% Similarity=0.241 Sum_probs=27.9
Q ss_pred ceEEEEEeCCCCEEEEEEeCC-CcEEE--cCCCCCccEEEEEEc
Q 002258 53 HVTVELRTLDGLVKESTQCAP-NGYYF--IPVYDKGSFVIKVNG 93 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~~-nG~y~--ip~l~~G~Y~l~v~~ 93 (946)
.++|++.+++|..+.....+. ||.|. +-...+|.|.|.+.-
T Consensus 45 ~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~ 88 (115)
T 2d7m_A 45 LLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKY 88 (115)
T ss_dssp CEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEE
T ss_pred EEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEE
Confidence 578888888876544444444 88888 233378999988774
No 198
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=23.95 E-value=3.4e+02 Score=23.77 Aligned_cols=66 Identities=15% Similarity=0.233 Sum_probs=37.2
Q ss_pred EEEEEEEEcCCcccEEEEEEeCCCcccceeeeeCCceEEEE--EEcCeeEEEEEEeeCCCCCCceEEcCCeEEEEEc
Q 002258 406 DICGVVRTVGSGNKVKVALTHGPDKVKPQVKQTDNNGNFCF--EVPPGEYRLSAMAATPESSSGILFLPPYADVVVK 480 (946)
Q Consensus 406 ~v~G~V~~~~~~~~a~VtL~~~~~~~~~~~~~Td~~G~F~f--~l~pG~Y~v~~~~~~~e~~~G~~~~p~~~~V~V~ 480 (946)
.|.+...+.++ ...+|.|..+.. ..-+|..--|.| ...+|.|+|++.+.+.. |-.-....+.|+|.
T Consensus 20 ~i~a~A~D~dg-~V~kVef~vdg~-----~vg~dt~apy~~~w~~~~G~htl~a~AtD~~---G~~~tS~~v~vtV~ 87 (98)
T 3pe9_A 20 KITATASDSDG-KISRVDFLVDGE-----VIGSDREAPYEYEWKAVEGNHEISVIAYDDD---DAASTPDSVKIFVK 87 (98)
T ss_dssp EEEEEECCSSS-CEEEEEEEETTE-----EEEEECSSSEEEEEECCSEEEEEEEEEEETT---CCBCCCEEEEEEEE
T ss_pred EEEEEEEeCCC-CEEEEEEEECCE-----EecccccCCEEEEEEcCCccEEEEEEEEECC---CCEEeeeEEEEEEC
Confidence 45555554332 466777764322 122333444444 53499999999997643 54334555666664
No 199
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=23.70 E-value=4.3e+02 Score=25.97 Aligned_cols=79 Identities=15% Similarity=0.261 Sum_probs=46.5
Q ss_pred ccEEEEEEeeccccccCCCCeeEeeeeEEEEeecCccccceEEEeeeEEEEEeccee-----eEEEEeeC---CCeeeEE
Q 002258 546 GKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDV-----DAYMTQQD---GSHVPLK 617 (946)
Q Consensus 546 G~Y~v~v~~~~~~~~~~~~~~cw~~~~~~v~V~~~~~~~i~f~q~Gy~~~i~~sh~~-----~~~~~~~~---~~~~~~~ 617 (946)
..|.|.+...+ .... ....+.|.|...+-+.+.|.+.-|.+.|.-..++ .+...+++ +..+.+.
T Consensus 76 ~~y~l~v~a~D-------~~~~-~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~ 147 (210)
T 3mvs_A 76 SEFTVEFSVSD-------HQGV-ITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYS 147 (210)
T ss_dssp CEEEEEEEEEC-------SSCE-EEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEE
T ss_pred ceEEEEEEEEe-------CCCC-EEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEE
Confidence 45777776542 1121 2346677777777778999999999988765542 23444444 2234456
Q ss_pred ecccceeEEec-CCce
Q 002258 618 VKKGSQHICVE-SPGV 632 (946)
Q Consensus 618 l~~G~~~~cv~-~~G~ 632 (946)
|..+...|.+- ..|.
T Consensus 148 i~~~~~~F~Id~~tG~ 163 (210)
T 3mvs_A 148 FQPPSPFFAIDSARGI 163 (210)
T ss_dssp ESSCCSSEEECTTTCE
T ss_pred EeCCCCCEEEeCCcEE
Confidence 65555455543 3443
No 200
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=23.68 E-value=51 Score=30.38 Aligned_cols=41 Identities=29% Similarity=0.346 Sum_probs=28.0
Q ss_pred cceEEEEEeCCCCEEEEEEeCC-CcEEE---cCCCCCccEEEEEEc
Q 002258 52 SHVTVELRTLDGLVKESTQCAP-NGYYF---IPVYDKGSFVIKVNG 93 (946)
Q Consensus 52 sgv~V~L~~~~G~~~~~t~t~~-nG~y~---ip~l~~G~Y~l~v~~ 93 (946)
..++|++.+++|..+.....+. ||.|. .|- .+|.|.|.+.-
T Consensus 43 ~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~-~~G~y~I~V~~ 87 (124)
T 2dmb_A 43 GKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAA-KPGTYVIYVRF 87 (124)
T ss_dssp CCEEEEEECTTSCBCCCEEEECTTSCEEEEEECS-SCEEEEEEEEE
T ss_pred CcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcC-CCEEEEEEEEE
Confidence 3678888888876544444443 78887 344 78999887774
No 201
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=22.82 E-value=69 Score=28.57 Aligned_cols=45 Identities=9% Similarity=-0.022 Sum_probs=26.4
Q ss_pred CccccceEEEEEeCCCCEEEE---------EEeCC-CcE-EE--cCCCCCccEEEEEE
Q 002258 48 RLDYSHVTVELRTLDGLVKES---------TQCAP-NGY-YF--IPVYDKGSFVIKVN 92 (946)
Q Consensus 48 ~i~~sgv~V~L~~~~G~~~~~---------t~t~~-nG~-y~--ip~l~~G~Y~l~v~ 92 (946)
+|......|+|++++|..+.. ...++ ++. +. ++.|.+|.|+|.-.
T Consensus 29 ~v~~~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~G~YtV~Wr 86 (104)
T 1lyq_A 29 NLTVKFSGAKLTMTGMKGMSSHSPMPVAAKVAPGADPKSMVIIPREPLPAGTYRVDWR 86 (104)
T ss_dssp CCCGGGCEEEEEEEEEC---CCCCEECCEEEEECSSTTEEEEEESSCCCSEEEEEEEE
T ss_pred CCcccccEEEEECCCCCeeeeccccccccceeecCCCCcEEEEECCCCCCceEEEEEE
Confidence 344445668888888766544 23333 454 33 56779999999543
No 202
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=22.42 E-value=2.1e+02 Score=24.78 Aligned_cols=43 Identities=7% Similarity=0.084 Sum_probs=25.5
Q ss_pred ccEEEEEEeCCCcccceeeeeCCceEEEEE---EcCeeEEEEEEee
Q 002258 418 NKVKVALTHGPDKVKPQVKQTDNNGNFCFE---VPPGEYRLSAMAA 460 (946)
Q Consensus 418 ~~a~VtL~~~~~~~~~~~~~Td~~G~F~f~---l~pG~Y~v~~~~~ 460 (946)
....+.+..-.+........-..||.|++. -.+|.|+|.+.-.
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~ 67 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYD 67 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEES
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEEC
Confidence 334444443333221233445678999887 4569999999874
No 203
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=22.20 E-value=88 Score=26.62 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=25.9
Q ss_pred ceEEEEEeCCCCEEEEEEeCC-CcEEE---cCCCCCccEEEEEEc
Q 002258 53 HVTVELRTLDGLVKESTQCAP-NGYYF---IPVYDKGSFVIKVNG 93 (946)
Q Consensus 53 gv~V~L~~~~G~~~~~t~t~~-nG~y~---ip~l~~G~Y~l~v~~ 93 (946)
.++|.+..++|..+.....+. ||.|. .|- .+|.|.|.+.-
T Consensus 31 ~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~-~~G~y~i~V~~ 74 (89)
T 3cnk_A 31 MLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLK-DKGEYTLVVKW 74 (89)
T ss_dssp CEEEEEECSSSCCSEEEEEEEETTEEEEEEECC-SCEEEEEEEEE
T ss_pred cEEEEEECCCCCceeEEEEECCCCEEEEEEEEC-CCccEEEEEEE
Confidence 567777777775333333333 78888 344 78999888774
No 204
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=22.01 E-value=68 Score=38.51 Aligned_cols=40 Identities=10% Similarity=0.282 Sum_probs=25.7
Q ss_pred CCceEEECCcCCeeEEEEEEEcCCceEEEecCceEEEEEe
Q 002258 272 ADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVR 311 (946)
Q Consensus 272 ~~G~f~f~~Lp~G~Y~v~~~~~~~~~~~~~~P~~~~vtV~ 311 (946)
...+..|.+||||+|++++......-.+.-.+.++.|.|.
T Consensus 708 ~~~~~~ytnL~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~ 747 (758)
T 3ott_A 708 NINRITYSNLSYGNYQLIISKLERDGQPSNRPHILNIRIL 747 (758)
T ss_dssp TCCEEEECSCCSEEEEEEEEEBCTTSCBCSSCEEEEEEEC
T ss_pred CcceEEecCCCCccEEEEEEEeCCCCCccCccEEEEEEEC
Confidence 3457899999999999998654433233333445555554
No 205
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=20.44 E-value=2.7e+02 Score=24.52 Aligned_cols=50 Identities=14% Similarity=0.178 Sum_probs=35.2
Q ss_pred CCcceEEEEEeCCCcEEE-EEEeCCCceEEEccc--cCceEEEEEecCCceEE
Q 002258 147 GPSNVNVELLSHSGDLIS-SVITSSEGSYLFKNI--IPGKYKLRASHPNLSVE 196 (946)
Q Consensus 147 plaGv~V~L~~~~g~~v~-~ttTd~~G~f~f~~l--~pG~Y~l~~~~~g~~~~ 196 (946)
+...+++.+.+++|..+. ...-..||.|.+.-. .+|.|.|.+...|..+.
T Consensus 29 g~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~~I~ 81 (102)
T 2dlg_A 29 NSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVT 81 (102)
T ss_dssp CGGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSSBCS
T ss_pred CCCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCEeCC
Confidence 344578888888885433 455567899986544 57999999988776543
Done!