Query 002263
Match_columns 946
No_of_seqs 720 out of 5213
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 20:10:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002263.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002263hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2040 Glycine dehydrogenase 100.0 1E-232 3E-237 1880.6 63.6 926 1-940 67-999 (1001)
2 PRK12566 glycine dehydrogenase 100.0 3E-210 7E-215 1851.0 87.2 921 1-937 28-953 (954)
3 TIGR00461 gcvP glycine dehydro 100.0 3E-206 7E-211 1832.3 91.8 923 1-931 13-939 (939)
4 PLN02414 glycine dehydrogenase 100.0 7E-196 1E-200 1766.9 92.2 938 1-939 50-987 (993)
5 PRK05367 glycine dehydrogenase 100.0 7E-195 2E-199 1770.8 88.9 923 1-938 25-954 (954)
6 COG1003 GcvP Glycine cleavage 100.0 7E-113 2E-117 912.5 38.7 459 445-910 29-496 (496)
7 COG0403 GcvP Glycine cleavage 100.0 3E-106 6E-111 865.1 39.2 415 1-418 22-447 (450)
8 PF02347 GDC-P: Glycine cleava 100.0 2.8E-94 6E-99 802.0 35.0 412 1-415 14-429 (429)
9 PF02347 GDC-P: Glycine cleava 100.0 1.8E-68 4E-73 595.1 29.9 403 402-853 5-429 (429)
10 PRK04366 glycine dehydrogenase 100.0 4.4E-61 9.4E-66 562.8 41.7 446 434-931 32-481 (481)
11 COG0403 GcvP Glycine cleavage 100.0 4E-59 8.7E-64 501.4 33.6 409 404-856 15-447 (450)
12 TIGR00461 gcvP glycine dehydro 100.0 1.8E-55 3.9E-60 529.9 37.3 401 402-854 4-426 (939)
13 PRK12566 glycine dehydrogenase 100.0 4E-54 8.6E-59 514.1 34.2 399 402-854 19-439 (954)
14 PRK04366 glycine dehydrogenase 100.0 1.7E-53 3.7E-58 498.8 37.7 381 14-417 30-444 (481)
15 PRK05367 glycine dehydrogenase 100.0 6.4E-52 1.4E-56 509.3 36.5 402 400-854 14-437 (954)
16 PRK00451 glycine dehydrogenase 100.0 3.8E-51 8.3E-56 478.3 40.4 409 1-416 15-443 (447)
17 PLN02414 glycine dehydrogenase 100.0 8.9E-49 1.9E-53 478.4 35.1 403 402-855 41-465 (993)
18 KOG2040 Glycine dehydrogenase 100.0 1.6E-43 3.5E-48 390.4 24.5 397 404-854 60-478 (1001)
19 COG1003 GcvP Glycine cleavage 100.0 1.2E-42 2.5E-47 373.1 30.5 388 6-417 19-443 (496)
20 PRK00451 glycine dehydrogenase 100.0 1.3E-38 2.8E-43 372.7 40.2 415 402-857 6-446 (447)
21 cd00613 GDC-P Glycine cleavage 100.0 1.2E-35 2.6E-40 342.7 37.7 375 38-415 1-398 (398)
22 COG0520 csdA Selenocysteine ly 100.0 1.2E-34 2.6E-39 329.4 35.7 362 38-417 5-401 (405)
23 cd00613 GDC-P Glycine cleavage 100.0 2.9E-34 6.3E-39 331.1 34.8 375 458-853 1-398 (398)
24 PRK09295 bifunctional cysteine 100.0 1.3E-27 2.8E-32 276.5 33.7 360 37-416 4-399 (406)
25 PF00266 Aminotran_5: Aminotra 100.0 1.4E-27 2.9E-32 273.0 27.1 326 67-411 10-371 (371)
26 PRK10874 cysteine sulfinate de 100.0 1.7E-26 3.7E-31 266.7 34.5 361 36-417 4-394 (401)
27 COG1104 NifS Cysteine sulfinat 100.0 1.6E-26 3.4E-31 253.1 32.0 290 96-417 41-373 (386)
28 TIGR03392 FeS_syn_CsdA cystein 100.0 1.8E-26 4E-31 266.2 34.1 357 39-417 4-391 (398)
29 PLN02855 Bifunctional selenocy 100.0 1.6E-26 3.5E-31 268.7 32.8 310 94-417 71-414 (424)
30 PRK13520 L-tyrosine decarboxyl 100.0 3.2E-26 6.9E-31 261.6 32.6 359 455-858 1-370 (371)
31 PLN03032 serine decarboxylase; 100.0 6.8E-26 1.5E-30 255.0 33.4 297 516-856 62-373 (374)
32 TIGR01788 Glu-decarb-GAD gluta 100.0 1.8E-25 3.9E-30 256.7 36.9 382 448-860 16-430 (431)
33 PLN02263 serine decarboxylase 100.0 6.5E-26 1.4E-30 258.1 32.2 300 517-860 130-444 (470)
34 COG0520 csdA Selenocysteine ly 100.0 6.8E-26 1.5E-30 257.9 31.7 315 515-858 61-404 (405)
35 PRK02769 histidine decarboxyla 99.9 4.3E-25 9.3E-30 250.4 34.0 299 516-859 61-372 (380)
36 KOG1383 Glutamate decarboxylas 99.9 2.8E-25 6.2E-30 242.0 30.5 374 447-862 54-449 (491)
37 PLN02590 probable tyrosine dec 99.9 3.5E-25 7.6E-30 258.7 32.9 388 453-862 105-535 (539)
38 TIGR01814 kynureninase kynuren 99.9 3.3E-25 7.2E-30 256.2 30.3 294 110-417 80-403 (406)
39 TIGR01979 sufS cysteine desulf 99.9 1.2E-24 2.6E-29 251.5 34.2 307 95-416 58-396 (403)
40 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.1E-24 2.5E-29 251.2 32.7 298 93-415 54-397 (397)
41 PLN02651 cysteine desulfurase 99.9 1.1E-24 2.5E-29 248.1 31.6 308 67-409 10-364 (364)
42 PLN02880 tyrosine decarboxylas 99.9 1.8E-24 4E-29 252.9 31.3 387 453-862 57-487 (490)
43 COG1104 NifS Cysteine sulfinat 99.9 2E-24 4.4E-29 236.6 29.3 309 518-862 42-380 (386)
44 COG0076 GadB Glutamate decarbo 99.9 9.3E-25 2E-29 251.2 27.6 341 453-827 35-405 (460)
45 TIGR03402 FeS_nifS cysteine de 99.9 7.2E-24 1.6E-28 243.0 34.3 292 94-417 37-368 (379)
46 cd06453 SufS_like Cysteine des 99.9 1.8E-23 4E-28 239.1 33.8 307 93-415 37-373 (373)
47 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.6E-23 5.6E-28 237.8 34.1 361 457-856 1-373 (373)
48 TIGR01977 am_tr_V_EF2568 cyste 99.9 4.1E-23 8.9E-28 236.4 33.8 301 95-416 40-374 (376)
49 PLN02724 Molybdenum cofactor s 99.9 3E-23 6.6E-28 257.2 32.0 308 93-417 72-484 (805)
50 PRK13520 L-tyrosine decarboxyl 99.9 9.6E-23 2.1E-27 232.9 33.5 346 35-416 1-366 (371)
51 PF00282 Pyridoxal_deC: Pyrido 99.9 3.8E-24 8.2E-29 242.3 20.8 330 448-797 11-372 (373)
52 TIGR03403 nifS_epsilon cystein 99.9 4.5E-22 9.8E-27 228.3 33.0 289 97-417 40-371 (382)
53 TIGR03799 NOD_PanD_pyr putativ 99.9 7.7E-22 1.7E-26 231.2 34.1 377 448-852 61-518 (522)
54 TIGR02006 IscS cysteine desulf 99.9 1.3E-21 2.8E-26 226.0 34.4 289 97-417 45-373 (402)
55 cd06450 DOPA_deC_like DOPA dec 99.9 1.1E-22 2.5E-27 229.9 24.2 294 513-855 31-344 (345)
56 PRK02948 cysteine desulfurase; 99.9 1.2E-21 2.6E-26 224.8 32.6 292 93-417 37-370 (381)
57 TIGR01979 sufS cysteine desulf 99.9 1.1E-21 2.4E-26 226.8 32.4 313 519-860 61-402 (403)
58 COG0075 Serine-pyruvate aminot 99.9 7.8E-22 1.7E-26 218.2 29.5 325 58-417 8-359 (383)
59 PRK09295 bifunctional cysteine 99.9 1.8E-21 3.9E-26 225.2 32.2 311 518-858 65-403 (406)
60 TIGR03392 FeS_syn_CsdA cystein 99.9 2.8E-21 6.1E-26 223.0 32.0 312 518-860 58-396 (398)
61 cd06453 SufS_like Cysteine des 99.9 3.2E-21 7E-26 220.5 31.8 310 517-853 40-373 (373)
62 PRK10874 cysteine sulfinate de 99.9 4.6E-21 1E-25 221.5 33.2 312 518-860 61-399 (401)
63 PLN02409 serine--glyoxylate am 99.9 2E-21 4.3E-26 224.0 29.2 323 58-417 12-368 (401)
64 PLN02855 Bifunctional selenocy 99.9 6.1E-21 1.3E-25 222.0 32.2 314 520-862 76-421 (424)
65 PRK03080 phosphoserine aminotr 99.9 3.4E-21 7.4E-26 220.2 28.7 297 97-417 46-369 (378)
66 cd06451 AGAT_like Alanine-glyo 99.9 4.6E-21 9.9E-26 217.9 29.1 311 518-857 30-355 (356)
67 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.1E-21 1.1E-25 220.8 29.8 310 516-853 56-397 (397)
68 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.4E-20 5.2E-25 213.3 34.4 342 37-416 1-371 (373)
69 TIGR03402 FeS_nifS cysteine de 99.9 2.4E-20 5.3E-25 213.8 32.1 309 518-862 40-375 (379)
70 PRK02769 histidine decarboxyla 99.9 2E-20 4.3E-25 212.3 29.6 280 96-418 62-369 (380)
71 PF00266 Aminotran_5: Aminotra 99.9 5.9E-21 1.3E-25 218.2 25.1 302 518-849 41-371 (371)
72 PRK13580 serine hydroxymethylt 99.9 1.5E-20 3.2E-25 214.8 27.0 306 519-860 94-446 (493)
73 TIGR01977 am_tr_V_EF2568 cyste 99.9 4.7E-20 1E-24 211.2 31.1 306 518-855 42-375 (376)
74 COG0156 BioF 7-keto-8-aminopel 99.9 4.6E-21 1E-25 214.3 21.9 316 52-417 43-386 (388)
75 PRK02948 cysteine desulfurase; 99.9 7.7E-20 1.7E-24 209.8 32.1 306 519-861 42-376 (381)
76 PTZ00094 serine hydroxymethylt 99.9 4.6E-20 9.9E-25 215.7 30.5 305 519-862 78-411 (452)
77 COG0112 GlyA Glycine/serine hy 99.9 1.4E-20 3.1E-25 202.6 23.2 296 521-859 73-390 (413)
78 TIGR02006 IscS cysteine desulf 99.9 9E-20 2E-24 210.7 31.8 308 520-862 47-380 (402)
79 TIGR03403 nifS_epsilon cystein 99.9 2.1E-19 4.6E-24 206.3 34.2 307 522-862 44-378 (382)
80 cd06451 AGAT_like Alanine-glyo 99.9 4.3E-20 9.4E-25 209.9 27.9 317 65-417 7-353 (356)
81 PRK14012 cysteine desulfurase; 99.9 1.2E-19 2.6E-24 209.9 32.0 290 98-417 48-375 (404)
82 TIGR02326 transamin_PhnW 2-ami 99.9 1E-19 2.2E-24 207.5 30.7 317 59-417 7-358 (363)
83 PLN02651 cysteine desulfurase 99.9 7.3E-20 1.6E-24 208.7 28.5 295 518-847 41-364 (364)
84 TIGR01814 kynureninase kynuren 99.9 1.3E-19 2.8E-24 209.7 30.1 295 531-857 80-405 (406)
85 TIGR01788 Glu-decarb-GAD gluta 99.9 3.9E-19 8.4E-24 204.5 33.1 349 27-417 15-425 (431)
86 TIGR03235 DNA_S_dndA cysteine 99.9 2.7E-19 6E-24 203.1 30.9 287 67-388 9-319 (353)
87 TIGR01366 serC_3 phosphoserine 99.9 1.6E-19 3.5E-24 204.8 28.4 326 60-417 8-356 (361)
88 TIGR03811 tyr_de_CO2_Ent tyros 99.9 2.5E-19 5.4E-24 211.5 30.6 342 457-818 61-522 (608)
89 TIGR03531 selenium_SpcS O-phos 99.9 2.1E-19 4.5E-24 205.7 28.6 362 448-856 29-443 (444)
90 PLN02271 serine hydroxymethylt 99.9 1.7E-19 3.6E-24 206.4 27.7 311 520-858 194-539 (586)
91 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.7E-19 5.9E-24 205.5 29.8 306 521-859 64-381 (387)
92 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.2E-19 6.8E-24 203.8 30.2 308 517-859 48-368 (370)
93 KOG1549 Cysteine desulfurase N 99.9 1.1E-19 2.4E-24 199.9 25.2 322 57-417 45-414 (428)
94 PLN02409 serine--glyoxylate am 99.8 2.1E-19 4.5E-24 207.2 28.5 320 517-861 39-374 (401)
95 TIGR02326 transamin_PhnW 2-ami 99.8 4.1E-19 8.8E-24 202.5 30.1 314 518-857 33-360 (363)
96 COG4992 ArgD Ornithine/acetylo 99.8 3.8E-19 8.3E-24 194.8 27.9 318 478-862 52-401 (404)
97 PLN03032 serine decarboxylase; 99.8 7.2E-19 1.6E-23 198.2 30.6 279 95-417 62-372 (374)
98 PRK13479 2-aminoethylphosphona 99.8 1.5E-18 3.2E-23 198.3 32.0 320 58-417 8-359 (368)
99 PRK14012 cysteine desulfurase; 99.8 2.1E-18 4.6E-23 199.4 33.0 310 520-862 49-382 (404)
100 PTZ00094 serine hydroxymethylt 99.8 3.4E-19 7.3E-24 208.4 26.5 286 95-417 75-404 (452)
101 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.4E-18 3E-23 197.2 30.5 321 60-417 4-353 (355)
102 PRK13479 2-aminoethylphosphona 99.8 1.5E-18 3.2E-23 198.3 30.8 317 518-860 35-364 (368)
103 PRK05355 3-phosphoserine/phosp 99.8 3.3E-19 7.1E-24 202.0 25.1 318 59-417 7-354 (360)
104 TIGR01364 serC_1 phosphoserine 99.8 5.8E-19 1.2E-23 199.0 26.7 313 67-416 2-343 (349)
105 COG3844 Kynureninase [Amino ac 99.8 6.1E-19 1.3E-23 184.1 24.2 305 97-417 74-398 (407)
106 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 8.9E-19 1.9E-23 198.8 28.0 312 518-856 29-354 (355)
107 cd00611 PSAT_like Phosphoserin 99.8 3E-19 6.5E-24 202.6 23.9 320 60-417 4-352 (355)
108 TIGR01822 2am3keto_CoA 2-amino 99.8 8.7E-19 1.9E-23 202.0 27.8 281 93-417 77-385 (393)
109 cd00378 SHMT Serine-glycine hy 99.8 2.8E-18 6.2E-23 198.3 28.5 296 522-860 66-386 (402)
110 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 6.5E-18 1.4E-22 194.1 30.7 284 95-417 59-377 (387)
111 COG0075 Serine-pyruvate aminot 99.8 8.7E-18 1.9E-22 186.2 28.9 313 518-861 36-365 (383)
112 PLN02955 8-amino-7-oxononanoat 99.8 2.6E-18 5.7E-23 196.4 25.3 303 56-417 110-457 (476)
113 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.3E-17 2.8E-22 190.5 30.6 285 93-417 45-364 (370)
114 PRK05937 8-amino-7-oxononanoat 99.8 3.2E-18 6.8E-23 195.5 25.3 315 54-417 10-346 (370)
115 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 7.7E-18 1.7E-22 191.8 28.3 301 522-857 46-360 (361)
116 KOG1359 Glycine C-acetyltransf 99.8 9.4E-19 2E-23 179.6 16.7 308 53-417 72-408 (417)
117 PLN03226 serine hydroxymethylt 99.8 2.3E-17 4.9E-22 192.5 29.7 309 525-863 85-423 (475)
118 PF00464 SHMT: Serine hydroxym 99.8 2.3E-18 5E-23 193.0 20.1 299 522-851 68-397 (399)
119 PRK13034 serine hydroxymethylt 99.8 3E-17 6.5E-22 189.7 28.3 297 520-858 70-391 (416)
120 PRK00011 glyA serine hydroxyme 99.8 3.4E-17 7.4E-22 190.2 28.3 292 525-859 76-389 (416)
121 PRK07179 hypothetical protein; 99.8 1.6E-17 3.4E-22 192.4 24.4 270 99-417 99-394 (407)
122 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 6.2E-18 1.4E-22 190.3 20.0 266 99-406 66-416 (417)
123 PLN03227 serine palmitoyltrans 99.8 2.7E-17 5.9E-22 188.8 25.7 309 52-417 2-378 (392)
124 COG0436 Aspartate/tyrosine/aro 99.8 3.7E-17 8.1E-22 186.7 26.3 351 457-859 10-391 (393)
125 PLN02483 serine palmitoyltrans 99.8 5.4E-17 1.2E-21 190.9 28.3 314 54-417 106-462 (489)
126 cd06450 DOPA_deC_like DOPA dec 99.8 2.8E-17 6E-22 186.0 24.8 264 93-417 32-344 (345)
127 TIGR01822 2am3keto_CoA 2-amino 99.8 4.5E-17 9.8E-22 187.7 27.0 296 516-860 79-390 (393)
128 TIGR01437 selA_rel uncharacter 99.8 5E-17 1.1E-21 184.7 26.2 295 519-856 44-362 (363)
129 cd00616 AHBA_syn 3-amino-5-hyd 99.8 3.9E-17 8.5E-22 185.2 24.6 301 521-854 19-352 (352)
130 COG0161 BioA Adenosylmethionin 99.8 4.3E-17 9.2E-22 182.9 24.3 340 481-862 57-446 (449)
131 cd00609 AAT_like Aspartate ami 99.8 6.5E-17 1.4E-21 182.5 25.6 296 515-854 35-349 (350)
132 PRK07179 hypothetical protein; 99.8 8.2E-17 1.8E-21 186.4 26.5 287 521-860 100-399 (407)
133 KOG2862 Alanine-glyoxylate ami 99.8 2.2E-16 4.7E-21 164.1 26.4 325 57-417 19-378 (385)
134 COG0076 GadB Glutamate decarbo 99.8 1.4E-16 2.9E-21 183.9 27.6 326 28-389 32-402 (460)
135 PRK15029 arginine decarboxylas 99.8 4.3E-17 9.4E-22 195.9 24.2 278 99-416 205-599 (755)
136 TIGR03235 DNA_S_dndA cysteine 99.8 1.7E-16 3.6E-21 180.3 27.9 269 519-822 41-318 (353)
137 COG0160 GabT 4-aminobutyrate a 99.8 4E-16 8.8E-21 176.3 30.3 327 479-860 67-446 (447)
138 cd06454 KBL_like KBL_like; thi 99.8 1.3E-16 2.9E-21 180.5 26.8 277 94-417 41-347 (349)
139 PRK05937 8-amino-7-oxononanoat 99.8 1.4E-16 3E-21 182.0 27.1 291 513-861 49-352 (370)
140 PLN02721 threonine aldolase 99.8 8.1E-17 1.8E-21 182.7 25.0 292 522-858 42-351 (353)
141 TIGR03246 arg_catab_astC succi 99.8 3.3E-16 7.1E-21 180.5 30.1 288 521-859 78-395 (397)
142 cd06454 KBL_like KBL_like; thi 99.8 6.7E-17 1.5E-21 183.0 23.8 289 519-856 45-348 (349)
143 cd06502 TA_like Low-specificit 99.8 3E-17 6.5E-22 185.0 20.7 287 522-855 34-337 (338)
144 TIGR01821 5aminolev_synth 5-am 99.8 1.1E-16 2.4E-21 185.0 25.8 296 517-860 87-397 (402)
145 PRK04073 rocD ornithine--oxo-a 99.8 3.5E-16 7.6E-21 180.4 29.1 282 522-857 84-395 (396)
146 TIGR01821 5aminolev_synth 5-am 99.7 3.4E-16 7.3E-21 181.0 28.4 280 92-417 83-392 (402)
147 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 8.8E-16 1.9E-20 174.9 30.8 278 99-416 44-357 (361)
148 PRK05964 adenosylmethionine--8 99.7 2.8E-16 6.1E-21 182.5 27.2 336 480-860 54-423 (423)
149 PRK15029 arginine decarboxylas 99.7 2.2E-16 4.9E-21 189.8 26.9 300 521-859 206-604 (755)
150 PRK03080 phosphoserine aminotr 99.7 1.2E-16 2.7E-21 182.7 23.6 309 519-862 47-376 (378)
151 PRK13392 5-aminolevulinate syn 99.7 3.7E-16 8E-21 181.1 25.5 292 520-859 91-397 (410)
152 KOG1549 Cysteine desulfurase N 99.7 4E-16 8.6E-21 172.0 24.1 169 520-701 85-257 (428)
153 PRK08114 cystathionine beta-ly 99.7 8.9E-16 1.9E-20 174.2 27.8 211 103-356 66-284 (395)
154 PRK13393 5-aminolevulinate syn 99.7 6.1E-16 1.3E-20 179.0 26.9 311 55-417 52-392 (406)
155 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 2.3E-17 5E-22 185.7 14.4 288 521-844 67-416 (417)
156 TIGR01437 selA_rel uncharacter 99.7 4.8E-16 1E-20 176.7 25.4 298 67-417 24-361 (363)
157 PRK06943 adenosylmethionine--8 99.7 1.6E-15 3.4E-20 176.7 30.2 338 481-860 67-447 (453)
158 PRK13392 5-aminolevulinate syn 99.7 5.3E-16 1.1E-20 179.8 26.2 277 95-417 87-393 (410)
159 PRK13034 serine hydroxymethylt 99.7 7.5E-16 1.6E-20 178.2 27.2 282 93-417 65-388 (416)
160 PRK09064 5-aminolevulinate syn 99.7 8.3E-16 1.8E-20 178.1 27.5 276 95-417 87-393 (407)
161 PLN02263 serine decarboxylase 99.7 2.9E-15 6.2E-20 171.3 31.2 332 39-418 76-440 (470)
162 PRK13393 5-aminolevulinate syn 99.7 6.6E-16 1.4E-20 178.7 26.6 294 519-860 89-397 (406)
163 PRK09064 5-aminolevulinate syn 99.7 5.2E-16 1.1E-20 179.7 25.7 293 518-860 89-398 (407)
164 PRK06939 2-amino-3-ketobutyrat 99.7 6.6E-16 1.4E-20 178.1 26.4 297 515-860 82-394 (397)
165 PRK00854 rocD ornithine--oxo-a 99.7 2.2E-15 4.7E-20 174.2 30.6 286 521-857 84-399 (401)
166 PLN02483 serine palmitoyltrans 99.7 8E-16 1.7E-20 181.0 27.2 298 517-861 143-468 (489)
167 PLN02724 Molybdenum cofactor s 99.7 5.2E-16 1.1E-20 192.9 26.9 320 515-859 73-488 (805)
168 cd00609 AAT_like Aspartate ami 99.7 2.1E-15 4.5E-20 170.2 29.0 304 60-416 4-349 (350)
169 PRK07678 aminotransferase; Val 99.7 1.6E-15 3.5E-20 176.8 28.6 344 480-860 59-450 (451)
170 TIGR01825 gly_Cac_T_rel pyrido 99.7 1.1E-15 2.4E-20 175.7 26.6 295 515-859 73-381 (385)
171 PRK06108 aspartate aminotransf 99.7 1.5E-15 3.2E-20 174.4 27.5 300 515-857 60-380 (382)
172 PRK05958 8-amino-7-oxononanoat 99.7 8.9E-16 1.9E-20 176.3 25.6 291 516-856 80-384 (385)
173 PRK06225 aspartate aminotransf 99.7 2.3E-15 4.9E-20 172.8 28.7 297 522-862 68-379 (380)
174 PRK05965 hypothetical protein; 99.7 4.6E-15 9.9E-20 173.3 31.3 343 481-862 59-450 (459)
175 PRK07482 hypothetical protein; 99.7 4.3E-15 9.3E-20 173.6 31.0 343 481-862 63-457 (461)
176 TIGR01141 hisC histidinol-phos 99.7 4.8E-16 1E-20 176.0 22.4 280 523-854 57-346 (346)
177 PLN02822 serine palmitoyltrans 99.7 1.2E-15 2.6E-20 179.1 26.4 315 54-417 110-473 (481)
178 PRK06939 2-amino-3-ketobutyrat 99.7 1.5E-15 3.2E-20 175.3 26.7 316 54-417 43-389 (397)
179 PRK05764 aspartate aminotransf 99.7 2.3E-15 5.1E-20 173.5 28.4 307 515-859 67-391 (393)
180 PRK13578 ornithine decarboxyla 99.7 3.7E-16 8.1E-21 185.9 22.2 282 99-416 174-560 (720)
181 TIGR00858 bioF 8-amino-7-oxono 99.7 1.5E-15 3.3E-20 172.6 25.7 288 517-854 58-360 (360)
182 TIGR03372 putres_am_tran putre 99.7 2.9E-15 6.2E-20 173.3 28.1 319 481-856 88-441 (442)
183 cd00616 AHBA_syn 3-amino-5-hyd 99.7 1.4E-15 3E-20 172.5 25.0 279 100-416 19-352 (352)
184 PRK13578 ornithine decarboxyla 99.7 8.3E-16 1.8E-20 183.0 24.0 308 521-859 175-565 (720)
185 PRK06767 methionine gamma-lyas 99.7 2.6E-15 5.6E-20 172.2 27.4 273 102-416 64-384 (386)
186 PLN02624 ornithine-delta-amino 99.7 5.1E-15 1.1E-19 173.7 30.1 293 522-859 119-444 (474)
187 PRK05968 hypothetical protein; 99.7 8.9E-16 1.9E-20 176.0 23.2 274 101-417 65-386 (389)
188 PRK03244 argD acetylornithine 99.7 4.1E-15 8.8E-20 171.8 28.7 279 523-861 88-396 (398)
189 PRK06173 adenosylmethionine--8 99.7 4.5E-15 9.7E-20 171.7 28.9 332 481-861 57-427 (429)
190 PRK01278 argD acetylornithine 99.7 5.6E-15 1.2E-19 170.1 29.0 288 522-859 75-388 (389)
191 PRK03715 argD acetylornithine 99.7 6.5E-15 1.4E-19 169.1 29.2 289 521-860 79-394 (395)
192 PLN02955 8-amino-7-oxononanoat 99.7 2.4E-15 5.3E-20 172.2 25.3 299 516-861 143-463 (476)
193 PRK11522 putrescine--2-oxoglut 99.7 4.3E-15 9.2E-20 173.1 27.8 332 480-863 94-455 (459)
194 PLN02590 probable tyrosine dec 99.7 1.3E-14 2.7E-19 170.3 31.7 359 28-417 102-528 (539)
195 PRK08064 cystathionine beta-ly 99.7 5.7E-15 1.2E-19 169.4 28.3 275 100-418 55-383 (390)
196 PRK13360 omega amino acid--pyr 99.7 1.1E-14 2.3E-19 169.4 30.9 339 480-860 58-441 (442)
197 PRK09028 cystathionine beta-ly 99.7 5.5E-15 1.2E-19 168.3 27.9 271 103-416 65-386 (394)
198 PRK09221 beta alanine--pyruvat 99.7 9.8E-15 2.1E-19 169.8 30.4 306 522-860 94-444 (445)
199 PRK06541 hypothetical protein; 99.7 1.3E-14 2.8E-19 169.4 31.4 343 480-861 64-457 (460)
200 TIGR01324 cysta_beta_ly_B cyst 99.7 3.7E-15 8E-20 169.7 26.2 160 102-270 53-218 (377)
201 PRK05957 aspartate aminotransf 99.7 4.5E-15 9.7E-20 170.8 27.2 304 515-859 64-385 (389)
202 PLN02880 tyrosine decarboxylas 99.7 3.6E-15 7.8E-20 174.9 26.7 360 28-417 54-480 (490)
203 PRK12381 bifunctional succinyl 99.7 7.5E-15 1.6E-19 169.7 28.9 290 522-862 83-402 (406)
204 TIGR01329 cysta_beta_ly_E cyst 99.7 3.7E-15 8E-20 170.2 25.8 272 101-416 49-374 (378)
205 cd00614 CGS_like CGS_like: Cys 99.7 9.1E-15 2E-19 166.9 28.9 214 100-356 41-261 (369)
206 PLN00175 aminotransferase fami 99.7 5.8E-15 1.3E-19 171.0 27.4 347 461-858 43-412 (413)
207 PLN03227 serine palmitoyltrans 99.7 6.4E-15 1.4E-19 169.2 27.3 296 521-861 44-384 (392)
208 PRK13580 serine hydroxymethylt 99.7 2.3E-15 5.1E-20 172.4 23.1 277 102-417 98-441 (493)
209 PLN02822 serine palmitoyltrans 99.7 7.9E-15 1.7E-19 172.3 28.2 299 516-860 150-478 (481)
210 PLN02760 4-aminobutyrate:pyruv 99.7 1.8E-14 4E-19 169.4 31.2 341 481-861 102-493 (504)
211 PRK08742 adenosylmethionine--8 99.7 1.3E-14 2.8E-19 169.4 29.8 308 522-861 109-469 (472)
212 PRK06916 adenosylmethionine--8 99.7 1.3E-14 2.8E-19 169.6 29.6 342 481-861 69-457 (460)
213 TIGR03576 pyridox_MJ0158 pyrid 99.7 1.1E-14 2.3E-19 164.2 28.0 312 39-418 8-344 (346)
214 PRK07681 aspartate aminotransf 99.7 9.2E-15 2E-19 168.8 28.1 296 516-855 69-384 (399)
215 TIGR00474 selA seryl-tRNA(sec) 99.7 1.5E-14 3.3E-19 167.1 29.6 302 67-415 92-453 (454)
216 TIGR00858 bioF 8-amino-7-oxono 99.7 7E-15 1.5E-19 167.1 26.6 274 95-416 57-360 (360)
217 PRK07324 transaminase; Validat 99.7 1E-14 2.2E-19 166.8 28.1 291 524-858 66-369 (373)
218 PRK04311 selenocysteine syntha 99.7 9.1E-15 2E-19 169.4 27.7 306 67-416 97-459 (464)
219 TIGR01141 hisC histidinol-phos 99.7 9.9E-15 2.2E-19 165.3 27.6 298 60-416 25-346 (346)
220 cd00615 Orn_deC_like Ornithine 99.7 4.6E-16 1E-20 172.0 16.2 166 521-702 60-236 (294)
221 PRK09082 methionine aminotrans 99.7 4.3E-15 9.2E-20 170.9 24.5 344 461-855 19-385 (386)
222 TIGR01885 Orn_aminotrans ornit 99.7 2.6E-14 5.7E-19 165.2 31.0 291 521-857 80-400 (401)
223 PRK09264 diaminobutyrate--2-ox 99.7 3.1E-14 6.7E-19 165.3 31.5 331 480-867 51-424 (425)
224 PRK07030 adenosylmethionine--8 99.7 2.3E-14 5.1E-19 167.4 30.4 337 481-860 60-447 (466)
225 PRK00950 histidinol-phosphate 99.7 4.4E-15 9.5E-20 169.2 23.8 282 523-857 72-360 (361)
226 PRK05630 adenosylmethionine--8 99.7 1.2E-14 2.6E-19 168.0 27.6 328 481-859 53-420 (422)
227 cd06502 TA_like Low-specificit 99.7 3.2E-15 7E-20 168.6 22.4 272 101-416 34-336 (338)
228 PRK07682 hypothetical protein; 99.7 3.9E-15 8.5E-20 170.7 23.5 301 515-859 56-376 (378)
229 PRK06105 aminotransferase; Pro 99.7 1.8E-14 4E-19 168.3 29.3 344 481-862 61-452 (460)
230 PRK04612 argD acetylornithine 99.7 2.6E-14 5.5E-19 164.7 30.1 296 522-861 84-405 (408)
231 PRK05355 3-phosphoserine/phosp 99.7 1.8E-15 3.9E-20 171.5 20.1 296 519-858 47-357 (360)
232 PRK07986 adenosylmethionine--8 99.7 1.8E-14 3.9E-19 166.5 28.6 297 522-859 88-423 (428)
233 PRK08117 4-aminobutyrate amino 99.7 2.8E-14 6.1E-19 166.3 30.3 329 480-861 55-431 (433)
234 PRK13238 tnaA tryptophanase/L- 99.7 3.3E-14 7.1E-19 165.7 30.7 318 522-877 80-451 (460)
235 TIGR03799 NOD_PanD_pyr putativ 99.7 3.3E-14 7.2E-19 167.1 30.6 350 28-414 61-518 (522)
236 PRK06207 aspartate aminotransf 99.7 2.6E-14 5.6E-19 165.3 29.3 304 516-860 78-403 (405)
237 cd00378 SHMT Serine-glycine hy 99.7 8.7E-15 1.9E-19 169.3 25.3 279 98-417 63-381 (402)
238 COG0156 BioF 7-keto-8-aminopel 99.7 7.1E-15 1.5E-19 164.7 23.6 291 514-856 78-387 (388)
239 PRK06917 hypothetical protein; 99.7 4.7E-14 1E-18 164.3 31.4 344 480-861 43-439 (447)
240 TIGR01328 met_gam_lyase methio 99.7 1.7E-14 3.7E-19 165.4 27.1 214 102-356 62-281 (391)
241 PRK08134 O-acetylhomoserine am 99.7 6.3E-15 1.4E-19 170.4 23.6 143 100-248 65-213 (433)
242 PRK07483 hypothetical protein; 99.7 5.8E-14 1.3E-18 163.3 31.7 344 480-862 42-440 (443)
243 PRK11658 UDP-4-amino-4-deoxy-L 99.7 1.7E-14 3.7E-19 165.1 27.0 309 522-857 35-377 (379)
244 KOG1360 5-aminolevulinate synt 99.7 2.2E-15 4.9E-20 160.7 18.0 314 56-416 179-519 (570)
245 PRK05093 argD bifunctional N-s 99.7 3.9E-14 8.5E-19 163.8 30.0 287 522-859 84-400 (403)
246 TIGR03588 PseC UDP-4-keto-6-de 99.7 2.2E-14 4.7E-19 164.7 27.4 308 522-856 31-379 (380)
247 PRK07582 cystathionine gamma-l 99.7 3.6E-14 7.7E-19 161.5 28.8 271 102-416 54-364 (366)
248 TIGR03537 DapC succinyldiamino 99.7 2.2E-14 4.7E-19 162.8 26.9 298 516-855 36-349 (350)
249 PRK08361 aspartate aminotransf 99.7 1.7E-14 3.6E-19 166.3 26.2 300 516-858 70-389 (391)
250 PRK07481 hypothetical protein; 99.7 4.1E-14 8.9E-19 165.0 29.6 340 480-860 54-446 (449)
251 PRK08593 4-aminobutyrate amino 99.7 5.6E-14 1.2E-18 163.6 30.5 334 481-869 55-436 (445)
252 PRK05387 histidinol-phosphate 99.7 1.1E-14 2.4E-19 165.4 24.1 283 523-858 63-352 (353)
253 PRK14807 histidinol-phosphate 99.7 2.1E-14 4.6E-19 163.0 26.3 283 523-857 62-350 (351)
254 PRK07309 aromatic amino acid a 99.7 3.6E-14 7.8E-19 163.4 28.5 305 516-860 67-389 (391)
255 PRK05958 8-amino-7-oxononanoat 99.7 4.8E-14 1E-18 161.9 29.3 277 93-417 78-383 (385)
256 PRK15400 lysine decarboxylase 99.7 1E-14 2.2E-19 173.6 24.2 298 521-859 196-559 (714)
257 PRK08133 O-succinylhomoserine 99.6 2.1E-14 4.5E-19 164.8 25.9 213 101-356 63-281 (390)
258 TIGR01825 gly_Cac_T_rel pyrido 99.6 1.6E-14 3.6E-19 165.9 25.0 277 93-417 72-377 (385)
259 PRK15399 lysine decarboxylase 99.6 1.6E-14 3.4E-19 172.0 25.3 272 99-416 195-554 (713)
260 PRK02731 histidinol-phosphate 99.6 1.5E-14 3.2E-19 165.3 24.4 285 523-858 70-365 (367)
261 PRK06234 methionine gamma-lyas 99.6 1.9E-14 4.1E-19 165.6 25.2 274 102-416 67-396 (400)
262 PRK04013 argD acetylornithine/ 99.6 3.5E-14 7.5E-19 160.6 26.8 269 522-860 68-361 (364)
263 PRK08360 4-aminobutyrate amino 99.6 7.6E-14 1.7E-18 162.3 30.4 333 480-869 53-433 (443)
264 PRK00011 glyA serine hydroxyme 99.6 3E-14 6.5E-19 165.6 27.0 273 104-417 76-385 (416)
265 PRK15407 lipopolysaccharide bi 99.6 4.5E-14 9.8E-19 163.9 28.0 376 456-858 2-435 (438)
266 PRK05769 4-aminobutyrate amino 99.6 1.2E-13 2.5E-18 160.9 31.4 290 522-859 99-439 (441)
267 TIGR01325 O_suc_HS_sulf O-succ 99.6 2.3E-14 5E-19 164.0 25.2 213 101-356 56-274 (380)
268 PRK15400 lysine decarboxylase 99.6 8.6E-15 1.9E-19 174.3 22.2 273 99-416 195-554 (714)
269 COG2008 GLY1 Threonine aldolas 99.6 8E-15 1.7E-19 158.1 19.9 293 517-857 32-341 (342)
270 TIGR00508 bioA adenosylmethion 99.6 5.8E-14 1.3E-18 162.8 28.7 299 522-859 90-426 (427)
271 PRK04635 histidinol-phosphate 99.6 1.3E-14 2.8E-19 164.9 22.8 281 523-855 63-351 (354)
272 PRK07504 O-succinylhomoserine 99.6 3E-14 6.6E-19 163.8 26.1 272 102-416 68-394 (398)
273 TIGR02407 ectoine_ectB diamino 99.6 7.7E-14 1.7E-18 161.2 29.6 323 480-859 47-412 (412)
274 TIGR03531 selenium_SpcS O-phos 99.6 9.8E-14 2.1E-18 159.2 29.9 342 27-417 28-442 (444)
275 PRK05942 aspartate aminotransf 99.6 3.6E-14 7.9E-19 163.6 26.6 296 515-857 72-387 (394)
276 PRK05967 cystathionine beta-ly 99.6 2.7E-14 5.9E-19 162.3 25.0 272 102-416 67-390 (395)
277 cd00610 OAT_like Acetyl ornith 99.6 6.9E-14 1.5E-18 162.3 28.8 295 519-856 78-412 (413)
278 PRK06176 cystathionine gamma-s 99.6 5.5E-14 1.2E-18 160.5 27.3 272 101-416 52-377 (380)
279 PRK06058 4-aminobutyrate amino 99.6 7.7E-14 1.7E-18 162.8 29.0 294 521-859 100-442 (443)
280 PRK08960 hypothetical protein; 99.6 5.1E-14 1.1E-18 162.0 27.2 298 515-854 68-382 (387)
281 PRK08248 O-acetylhomoserine am 99.6 2E-14 4.3E-19 166.3 23.8 142 102-249 67-214 (431)
282 PRK07495 4-aminobutyrate amino 99.6 1.3E-13 2.8E-18 159.7 30.5 330 480-861 52-423 (425)
283 PRK06062 hypothetical protein; 99.6 8.2E-14 1.8E-18 162.4 29.0 329 481-862 66-448 (451)
284 COG0001 HemL Glutamate-1-semia 99.6 8.2E-14 1.8E-18 154.7 27.4 291 521-861 94-430 (432)
285 PRK05639 4-aminobutyrate amino 99.6 1.2E-13 2.5E-18 161.1 30.0 297 522-861 98-445 (457)
286 PRK12389 glutamate-1-semialdeh 99.6 6.5E-14 1.4E-18 162.6 27.8 319 480-859 65-427 (428)
287 PRK06082 4-aminobutyrate amino 99.6 1.1E-13 2.4E-18 161.6 29.5 299 521-862 114-454 (459)
288 KOG0629 Glutamate decarboxylas 99.6 7.1E-15 1.5E-19 158.8 17.7 328 513-856 134-506 (510)
289 TIGR01366 serC_3 phosphoserine 99.6 1.5E-14 3.2E-19 164.3 21.5 302 519-859 40-360 (361)
290 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 6.3E-14 1.4E-18 158.9 26.3 271 102-415 58-385 (386)
291 PLN02509 cystathionine beta-ly 99.6 3.5E-14 7.7E-19 164.5 24.8 273 101-417 135-461 (464)
292 PRK12403 putative aminotransfe 99.6 2.5E-13 5.4E-18 158.8 32.1 341 481-861 67-454 (460)
293 PRK01688 histidinol-phosphate 99.6 1.3E-14 2.8E-19 164.7 20.7 281 523-854 60-351 (351)
294 PRK07050 cystathionine beta-ly 99.6 2.3E-14 5E-19 164.4 23.0 272 102-416 68-390 (394)
295 PRK08912 hypothetical protein; 99.6 6.8E-14 1.5E-18 161.0 27.0 301 515-857 62-384 (387)
296 PRK06290 aspartate aminotransf 99.6 4.7E-14 1E-18 163.1 25.6 306 516-860 81-406 (410)
297 PRK12414 putative aminotransfe 99.6 3.2E-14 6.8E-19 163.5 24.0 296 515-854 65-382 (384)
298 PRK07550 hypothetical protein; 99.6 1E-13 2.2E-18 159.4 28.3 350 458-856 14-384 (386)
299 TIGR00709 dat 2,4-diaminobutyr 99.6 2.3E-13 5.1E-18 158.6 31.5 328 480-861 51-437 (442)
300 PRK07337 aminotransferase; Val 99.6 5.7E-14 1.2E-18 161.7 26.2 303 515-855 66-385 (388)
301 TIGR03540 DapC_direct LL-diami 99.6 8.4E-14 1.8E-18 160.0 27.5 295 515-853 66-380 (383)
302 TIGR01364 serC_1 phosphoserine 99.6 2E-14 4.4E-19 162.2 21.7 295 519-858 36-347 (349)
303 PLN03026 histidinol-phosphate 99.6 5.2E-14 1.1E-18 161.4 25.4 284 523-856 89-379 (380)
304 PRK08064 cystathionine beta-ly 99.6 4.4E-14 9.6E-19 162.1 24.5 280 521-855 55-382 (390)
305 PRK07777 aminotransferase; Val 99.6 6.2E-14 1.3E-18 161.3 25.8 299 515-856 60-383 (387)
306 PRK06938 diaminobutyrate--2-ox 99.6 2.3E-13 4.9E-18 159.1 30.7 297 522-860 108-461 (464)
307 PRK08861 cystathionine gamma-s 99.6 9.3E-14 2E-18 158.4 26.7 272 102-416 56-382 (388)
308 PRK07811 cystathionine gamma-s 99.6 1.2E-13 2.7E-18 158.3 27.8 273 101-416 63-387 (388)
309 PRK03158 histidinol-phosphate 99.6 6.2E-14 1.3E-18 159.7 25.3 281 523-856 67-358 (359)
310 KOG2862 Alanine-glyoxylate ami 99.6 1.2E-13 2.7E-18 143.8 24.9 308 518-859 48-382 (385)
311 PRK09105 putative aminotransfe 99.6 9.9E-14 2.1E-18 158.4 26.9 280 522-857 80-368 (370)
312 PRK07480 putative aminotransfe 99.6 2.1E-13 4.6E-18 159.1 30.1 343 480-862 62-451 (456)
313 PLN00145 tyrosine/nicotianamin 99.6 3.1E-13 6.7E-18 157.3 31.4 314 515-861 93-426 (430)
314 PRK07810 O-succinylhomoserine 99.6 5.6E-14 1.2E-18 161.6 24.8 213 101-356 72-291 (403)
315 PRK08249 cystathionine gamma-s 99.6 9.8E-14 2.1E-18 159.3 26.8 274 100-416 65-392 (398)
316 PRK07036 hypothetical protein; 99.6 3.8E-13 8.3E-18 157.4 32.1 341 480-862 63-455 (466)
317 PLN02482 glutamate-1-semialdeh 99.6 6.3E-14 1.4E-18 163.5 25.3 289 522-859 141-473 (474)
318 PRK15399 lysine decarboxylase 99.6 9.6E-14 2.1E-18 165.4 27.0 299 521-859 196-559 (713)
319 PRK08068 transaminase; Reviewe 99.6 1.1E-13 2.5E-18 159.2 26.8 293 516-853 70-383 (389)
320 PTZ00125 ornithine aminotransf 99.6 5.2E-13 1.1E-17 154.4 32.2 297 521-861 74-397 (400)
321 PRK09148 aminotransferase; Val 99.6 1.9E-13 4.1E-18 158.2 28.6 309 515-862 67-393 (405)
322 PRK07812 O-acetylhomoserine am 99.6 5.9E-14 1.3E-18 162.1 24.2 141 102-248 72-219 (436)
323 cd00614 CGS_like CGS_like: Cys 99.6 4.6E-14 9.9E-19 161.1 23.0 210 522-777 42-257 (369)
324 PRK05613 O-acetylhomoserine am 99.6 4.9E-14 1.1E-18 162.9 23.4 145 100-250 70-220 (437)
325 TIGR01365 serC_2 phosphoserine 99.6 9.4E-14 2E-18 156.8 25.1 296 97-416 37-368 (374)
326 PLN02242 methionine gamma-lyas 99.6 1E-13 2.2E-18 160.0 25.7 218 100-358 77-302 (418)
327 KOG2467 Glycine/serine hydroxy 99.6 8.7E-14 1.9E-18 147.5 22.6 354 468-863 46-430 (477)
328 PRK09147 succinyldiaminopimela 99.6 1.8E-13 3.9E-18 157.9 27.7 299 515-857 64-394 (396)
329 PRK07505 hypothetical protein; 99.6 1.3E-13 2.7E-18 159.5 26.2 291 519-859 90-399 (402)
330 PRK09276 LL-diaminopimelate am 99.6 2E-13 4.3E-18 157.1 27.6 295 516-853 69-382 (385)
331 PRK09792 4-aminobutyrate trans 99.6 4.4E-13 9.6E-18 155.4 30.6 327 480-858 52-420 (421)
332 PRK08153 histidinol-phosphate 99.6 2.1E-13 4.6E-18 155.8 27.5 291 523-862 70-368 (369)
333 TIGR01264 tyr_amTase_E tyrosin 99.6 3.3E-13 7.1E-18 156.1 29.1 306 516-859 73-399 (401)
334 PRK05968 hypothetical protein; 99.6 4.3E-14 9.4E-19 162.1 21.6 283 522-860 65-387 (389)
335 PLN02187 rooty/superroot1 99.6 3.2E-13 7E-18 158.3 29.3 343 476-862 65-441 (462)
336 PRK07503 methionine gamma-lyas 99.6 3.8E-13 8.1E-18 155.0 29.2 276 101-417 67-396 (403)
337 PRK08574 cystathionine gamma-s 99.6 1.9E-13 4.2E-18 156.3 26.5 212 101-356 55-273 (385)
338 PRK10534 L-threonine aldolase; 99.6 2.5E-14 5.5E-19 161.1 19.0 282 522-857 36-331 (333)
339 PRK03321 putative aminotransfe 99.6 5.7E-14 1.2E-18 159.5 21.9 282 522-858 59-350 (352)
340 PRK04870 histidinol-phosphate 99.6 1.9E-13 4.2E-18 155.4 26.2 282 523-856 66-355 (356)
341 PRK07671 cystathionine beta-ly 99.6 2.6E-13 5.6E-18 154.9 27.2 212 101-356 52-270 (377)
342 PRK06702 O-acetylhomoserine am 99.6 2E-13 4.4E-18 156.8 26.4 143 101-249 63-212 (432)
343 TIGR01328 met_gam_lyase methio 99.6 1E-13 2.3E-18 158.9 23.9 219 522-784 61-287 (391)
344 PLN02721 threonine aldolase 99.6 1.2E-13 2.7E-18 156.7 24.3 273 101-417 42-348 (353)
345 COG0626 MetC Cystathionine bet 99.6 2.5E-13 5.5E-18 152.0 26.1 273 102-416 66-393 (396)
346 PRK08247 cystathionine gamma-s 99.6 1.8E-13 3.9E-18 155.9 25.6 228 101-372 54-289 (366)
347 PRK06348 aspartate aminotransf 99.6 3.7E-13 8E-18 154.7 28.4 300 515-855 65-381 (384)
348 PRK02936 argD acetylornithine 99.6 4.9E-13 1.1E-17 153.4 29.2 276 520-856 71-376 (377)
349 TIGR01329 cysta_beta_ly_E cyst 99.6 8.8E-14 1.9E-18 158.9 22.6 281 522-859 49-375 (378)
350 PLN00144 acetylornithine trans 99.6 5.8E-13 1.3E-17 152.5 29.3 285 522-859 59-380 (382)
351 PRK08861 cystathionine gamma-s 99.6 9.6E-14 2.1E-18 158.3 22.6 217 522-784 55-280 (388)
352 PLN03226 serine hydroxymethylt 99.6 2.7E-13 5.9E-18 158.4 26.8 282 104-417 85-415 (475)
353 PRK07269 cystathionine gamma-s 99.6 2.5E-13 5.5E-18 154.0 25.8 236 102-381 57-301 (364)
354 PLN02656 tyrosine transaminase 99.6 4.1E-13 8.8E-18 155.6 27.9 306 515-858 72-402 (409)
355 PF00155 Aminotran_1_2: Aminot 99.6 5.6E-14 1.2E-18 160.2 20.4 289 524-853 48-363 (363)
356 COG0079 HisC Histidinol-phosph 99.6 2.9E-13 6.2E-18 152.2 25.3 284 522-859 59-354 (356)
357 TIGR02379 ECA_wecE TDP-4-keto- 99.6 4.2E-13 9.1E-18 153.2 27.1 307 522-857 33-375 (376)
358 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 3.6E-13 7.9E-18 154.1 26.6 307 521-857 32-374 (375)
359 PRK09028 cystathionine beta-ly 99.6 1.5E-13 3.3E-18 156.5 23.3 216 523-784 64-287 (394)
360 COG1982 LdcC Arginine/lysine/o 99.6 9.7E-14 2.1E-18 159.0 21.3 279 99-416 70-403 (557)
361 cd00611 PSAT_like Phosphoserin 99.6 7.2E-14 1.6E-18 158.7 20.3 293 519-856 43-353 (355)
362 PRK06777 4-aminobutyrate amino 99.6 7.8E-13 1.7E-17 153.3 29.2 322 480-857 52-419 (421)
363 PRK05994 O-acetylhomoserine am 99.6 2.9E-13 6.2E-18 156.9 25.6 152 102-262 66-223 (427)
364 PF00282 Pyridoxal_deC: Pyrido 99.6 8.9E-14 1.9E-18 157.9 20.9 315 27-370 10-372 (373)
365 COG1982 LdcC Arginine/lysine/o 99.6 1.4E-13 3.1E-18 157.6 22.5 297 522-854 72-403 (557)
366 PRK08776 cystathionine gamma-s 99.6 5.2E-13 1.1E-17 153.6 27.3 273 102-417 63-390 (405)
367 PRK06460 hypothetical protein; 99.6 7.6E-13 1.7E-17 151.1 28.4 213 100-355 46-264 (376)
368 PRK07504 O-succinylhomoserine 99.6 2.2E-13 4.8E-18 156.6 23.9 216 522-784 67-292 (398)
369 PRK02731 histidinol-phosphate 99.6 7.7E-13 1.7E-17 151.1 28.3 265 102-417 70-362 (367)
370 PRK08045 cystathionine gamma-s 99.6 6.2E-13 1.3E-17 152.1 27.4 273 102-417 55-382 (386)
371 TIGR00713 hemL glutamate-1-sem 99.6 2.7E-13 5.8E-18 157.9 24.7 290 522-859 90-422 (423)
372 PRK01533 histidinol-phosphate 99.6 1.7E-13 3.8E-18 156.1 22.6 278 523-858 67-354 (366)
373 PRK07046 aminotransferase; Val 99.6 2.7E-13 5.7E-18 158.0 24.6 329 480-861 87-452 (453)
374 KOG1402 Ornithine aminotransfe 99.6 8.8E-13 1.9E-17 138.3 25.6 334 460-857 57-425 (427)
375 PRK05613 O-acetylhomoserine am 99.6 4.8E-13 1E-17 154.7 26.3 145 521-684 70-219 (437)
376 PRK06107 aspartate aminotransf 99.6 4.8E-13 1E-17 154.7 26.4 308 515-860 69-401 (402)
377 PRK06931 diaminobutyrate--2-ox 99.6 1.3E-12 2.9E-17 152.5 30.3 329 480-861 70-456 (459)
378 PRK06084 O-acetylhomoserine am 99.6 2.6E-13 5.6E-18 156.9 24.1 155 102-265 61-221 (425)
379 KOG1404 Alanine-glyoxylate ami 99.6 1E-13 2.2E-18 148.9 18.8 322 481-853 63-432 (442)
380 TIGR00707 argD acetylornithine 99.6 1.1E-12 2.3E-17 150.6 28.7 289 521-856 70-378 (379)
381 PRK04311 selenocysteine syntha 99.6 4.1E-13 8.9E-18 155.7 25.2 291 522-858 129-463 (464)
382 PRK11658 UDP-4-amino-4-deoxy-L 99.6 3.3E-13 7.1E-18 154.6 24.1 287 101-416 35-374 (379)
383 TIGR03576 pyridox_MJ0158 pyrid 99.6 3.2E-13 6.9E-18 152.3 23.5 281 517-856 51-344 (346)
384 PRK06148 hypothetical protein; 99.6 5.2E-13 1.1E-17 169.2 27.9 297 522-860 665-1011(1013)
385 PRK00615 glutamate-1-semialdeh 99.6 4.7E-13 1E-17 154.9 25.2 326 481-861 66-430 (433)
386 PRK08114 cystathionine beta-ly 99.6 1.1E-13 2.4E-18 157.2 19.3 260 522-855 64-333 (395)
387 PF01041 DegT_DnrJ_EryC1: DegT 99.6 4E-13 8.6E-18 153.1 23.9 303 521-854 26-363 (363)
388 PRK07366 succinyldiaminopimela 99.6 6.6E-13 1.4E-17 152.9 25.8 301 515-856 67-387 (388)
389 COG1103 Archaea-specific pyrid 99.6 8.5E-13 1.8E-17 134.9 23.2 303 522-859 63-380 (382)
390 PRK06149 hypothetical protein; 99.6 8.9E-13 1.9E-17 167.1 29.1 298 521-859 625-970 (972)
391 PRK06767 methionine gamma-lyas 99.6 1.3E-13 2.8E-18 158.2 19.6 285 522-859 63-385 (386)
392 PRK03317 histidinol-phosphate 99.6 8.6E-13 1.9E-17 150.8 26.4 289 517-858 66-363 (368)
393 PRK13355 bifunctional HTH-doma 99.6 6.7E-13 1.5E-17 158.2 26.4 309 515-859 184-514 (517)
394 TIGR00474 selA seryl-tRNA(sec) 99.6 5.4E-13 1.2E-17 154.3 24.7 293 521-853 123-453 (454)
395 PRK07683 aminotransferase A; V 99.5 1.2E-12 2.5E-17 150.7 27.5 300 516-858 65-382 (387)
396 PRK08248 O-acetylhomoserine am 99.5 1.1E-12 2.3E-17 152.0 26.9 143 522-684 66-213 (431)
397 TIGR02080 O_succ_thio_ly O-suc 99.5 1.4E-12 3.1E-17 149.0 27.6 212 102-356 54-272 (382)
398 PRK05994 O-acetylhomoserine am 99.5 1.1E-12 2.4E-17 152.1 27.0 143 522-684 65-212 (427)
399 PTZ00433 tyrosine aminotransfe 99.5 1.2E-12 2.5E-17 152.0 27.3 308 516-861 75-410 (412)
400 PRK05166 histidinol-phosphate 99.5 1.1E-12 2.3E-17 150.1 26.6 282 524-857 75-369 (371)
401 PRK08297 L-lysine aminotransfe 99.5 9.3E-13 2E-17 153.3 26.4 330 480-860 57-442 (443)
402 COG3844 Kynureninase [Amino ac 99.5 1.4E-12 3E-17 137.0 24.7 308 518-860 74-403 (407)
403 PLN02271 serine hydroxymethylt 99.5 3.5E-13 7.6E-18 154.9 22.2 293 103-416 198-535 (586)
404 PRK07568 aspartate aminotransf 99.5 1.7E-12 3.7E-17 149.9 28.4 257 567-860 111-393 (397)
405 PRK02627 acetylornithine amino 99.5 3.4E-12 7.3E-17 147.4 30.7 289 520-859 81-394 (396)
406 PRK15481 transcriptional regul 99.5 1E-12 2.2E-17 153.4 26.6 273 539-858 143-430 (431)
407 TIGR01140 L_thr_O3P_dcar L-thr 99.5 4.4E-13 9.5E-18 150.8 22.7 270 523-854 50-330 (330)
408 PRK07582 cystathionine gamma-l 99.5 4.9E-13 1.1E-17 152.3 23.2 275 522-854 53-364 (366)
409 cd00615 Orn_deC_like Ornithine 99.5 3.7E-14 8.1E-19 156.8 13.7 154 99-266 59-236 (294)
410 PRK08056 threonine-phosphate d 99.5 8.3E-13 1.8E-17 150.2 25.0 282 523-857 58-353 (356)
411 PRK05939 hypothetical protein; 99.5 8.5E-13 1.8E-17 151.4 25.2 142 101-249 49-196 (397)
412 PRK05387 histidinol-phosphate 99.5 2.4E-12 5.1E-17 146.3 28.7 268 103-416 64-348 (353)
413 COG2873 MET17 O-acetylhomoseri 99.5 1.3E-12 2.9E-17 139.9 24.4 140 104-249 67-212 (426)
414 PRK07050 cystathionine beta-ly 99.5 4.1E-13 9E-18 154.1 22.4 286 522-859 67-391 (394)
415 TIGR01324 cysta_beta_ly_B cyst 99.5 5.3E-13 1.2E-17 152.1 23.1 210 522-777 52-266 (377)
416 PRK08134 O-acetylhomoserine am 99.5 8.8E-13 1.9E-17 152.6 25.1 143 522-684 66-213 (433)
417 TIGR03538 DapC_gpp succinyldia 99.5 1.6E-12 3.5E-17 149.9 27.4 296 515-855 63-391 (393)
418 PRK06234 methionine gamma-lyas 99.5 5.5E-13 1.2E-17 153.5 23.1 212 522-777 66-284 (400)
419 PLN02509 cystathionine beta-ly 99.5 3.2E-13 6.9E-18 156.6 21.2 216 521-784 134-359 (464)
420 PRK07503 methionine gamma-lyas 99.5 8.6E-13 1.9E-17 152.0 24.7 212 522-777 67-283 (403)
421 PLN00143 tyrosine/nicotianamin 99.5 4.6E-12 1E-16 146.8 30.8 312 516-859 74-404 (409)
422 PRK08363 alanine aminotransfer 99.5 1.3E-12 2.8E-17 150.9 26.1 306 516-859 70-394 (398)
423 PRK08133 O-succinylhomoserine 99.5 3.5E-13 7.7E-18 154.6 20.9 259 522-854 63-327 (390)
424 TIGR00699 GABAtrns_euk 4-amino 99.5 2.7E-12 5.8E-17 149.0 28.1 284 524-856 109-463 (464)
425 PRK06434 cystathionine gamma-l 99.5 1.5E-12 3.2E-17 148.2 25.5 271 101-416 66-383 (384)
426 TIGR00700 GABAtrnsam 4-aminobu 99.5 5.1E-12 1.1E-16 146.7 30.6 325 480-857 45-418 (420)
427 PRK08175 aminotransferase; Val 99.5 3.2E-12 7E-17 147.5 28.9 305 515-858 66-388 (395)
428 PRK08636 aspartate aminotransf 99.5 3.1E-12 6.8E-17 148.0 28.7 307 515-859 70-400 (403)
429 KOG1383 Glutamate decarboxylas 99.5 2.4E-12 5.3E-17 141.6 25.9 354 27-417 54-442 (491)
430 COG0399 WecE Predicted pyridox 99.5 3.6E-12 7.8E-17 142.0 27.7 303 522-858 36-372 (374)
431 TIGR01325 O_suc_HS_sulf O-succ 99.5 5.9E-13 1.3E-17 152.5 22.2 210 522-778 56-271 (380)
432 TIGR01265 tyr_nico_aTase tyros 99.5 5.5E-12 1.2E-16 145.9 30.5 261 567-858 119-400 (403)
433 PRK06918 4-aminobutyrate amino 99.5 5.2E-12 1.1E-16 147.9 30.5 332 480-862 66-446 (451)
434 PRK04781 histidinol-phosphate 99.5 2.4E-12 5.2E-17 146.8 27.0 284 523-857 62-361 (364)
435 TIGR03251 LAT_fam L-lysine 6-t 99.5 1.7E-12 3.7E-17 150.9 26.1 290 522-855 87-430 (431)
436 TIGR03588 PseC UDP-4-keto-6-de 99.5 9.8E-13 2.1E-17 151.0 23.9 290 101-417 31-378 (380)
437 cd00617 Tnase_like Tryptophana 99.5 2.6E-12 5.5E-17 147.9 27.0 319 522-877 55-426 (431)
438 PLN02452 phosphoserine transam 99.5 1.6E-12 3.5E-17 146.8 25.0 316 59-417 11-359 (365)
439 PRK06176 cystathionine gamma-s 99.5 4.6E-13 1E-17 152.9 20.7 209 522-777 52-266 (380)
440 KOG0628 Aromatic-L-amino-acid/ 99.5 5.4E-12 1.2E-16 138.4 27.6 374 454-861 49-473 (511)
441 PLN02242 methionine gamma-lyas 99.5 4.1E-13 8.8E-18 155.0 19.9 261 522-855 78-348 (418)
442 PRK08574 cystathionine gamma-s 99.5 6E-13 1.3E-17 152.3 21.0 257 522-854 55-321 (385)
443 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2.8E-12 6E-17 148.6 26.7 141 102-248 60-206 (418)
444 KOG0053 Cystathionine beta-lya 99.5 1.1E-12 2.3E-17 145.0 21.9 161 102-271 80-247 (409)
445 PRK05939 hypothetical protein; 99.5 4.1E-12 8.8E-17 145.8 27.8 235 522-784 49-294 (397)
446 cd01494 AAT_I Aspartate aminot 99.5 2.8E-13 6E-18 136.0 16.1 161 522-700 2-170 (170)
447 PRK08249 cystathionine gamma-s 99.5 6.3E-13 1.4E-17 152.6 21.0 260 522-854 66-330 (398)
448 PRK07908 hypothetical protein; 99.5 2.4E-12 5.1E-17 146.1 25.3 279 523-858 61-346 (349)
449 PRK06225 aspartate aminotransf 99.5 1.4E-11 3.1E-16 141.4 31.8 323 38-417 14-372 (380)
450 PRK07812 O-acetylhomoserine am 99.5 1.9E-12 4.2E-17 149.6 24.6 279 522-854 71-368 (436)
451 PRK09105 putative aminotransfe 99.5 6.9E-12 1.5E-16 143.3 28.5 297 58-416 47-365 (370)
452 PRK08776 cystathionine gamma-s 99.5 4.4E-12 9.4E-17 146.0 26.9 210 522-777 62-277 (405)
453 PRK08045 cystathionine gamma-s 99.5 1.2E-12 2.5E-17 149.9 22.0 217 522-784 54-279 (386)
454 KOG0257 Kynurenine aminotransf 99.5 2.6E-12 5.7E-17 140.2 23.4 295 460-798 18-344 (420)
455 PRK09265 aminotransferase AlaT 99.5 4.9E-12 1.1E-16 146.4 27.5 310 515-859 71-401 (404)
456 PRK07811 cystathionine gamma-s 99.5 1.2E-12 2.6E-17 150.2 21.9 214 522-784 63-288 (388)
457 PRK06108 aspartate aminotransf 99.5 1.5E-11 3.3E-16 141.2 31.0 326 41-416 12-377 (382)
458 PRK05957 aspartate aminotransf 99.5 1.1E-11 2.5E-16 142.6 29.9 311 58-416 31-380 (389)
459 PRK02610 histidinol-phosphate 99.5 4.5E-12 9.7E-17 145.2 26.4 294 516-859 66-371 (374)
460 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 4.2E-12 9.1E-17 147.1 26.0 156 522-701 59-219 (418)
461 PTZ00377 alanine aminotransfer 99.5 1.3E-11 2.8E-16 146.0 30.6 314 516-862 115-478 (481)
462 PLN02376 1-aminocyclopropane-1 99.5 9.6E-12 2.1E-16 146.7 29.1 308 515-861 93-440 (496)
463 PRK06836 aspartate aminotransf 99.5 7.5E-12 1.6E-16 144.4 27.5 300 516-859 73-391 (394)
464 PRK05839 hypothetical protein; 99.5 4.5E-12 9.7E-17 145.2 25.3 290 515-857 59-372 (374)
465 PTZ00376 aspartate aminotransf 99.5 2.3E-12 4.9E-17 149.2 23.0 300 515-858 71-402 (404)
466 COG1103 Archaea-specific pyrid 99.5 5.8E-12 1.2E-16 128.9 22.8 303 68-417 29-376 (382)
467 PRK06425 histidinol-phosphate 99.5 3.7E-12 8.1E-17 143.4 23.9 276 523-857 43-331 (332)
468 PRK05664 threonine-phosphate d 99.5 5.5E-12 1.2E-16 141.9 25.0 272 523-860 52-329 (330)
469 PRK00062 glutamate-1-semialdeh 99.5 4.4E-12 9.5E-17 147.5 24.6 290 522-860 92-425 (426)
470 PRK07671 cystathionine beta-ly 99.5 3.1E-12 6.8E-17 146.1 22.2 258 522-854 52-315 (377)
471 PRK05967 cystathionine beta-ly 99.5 3.9E-12 8.5E-17 144.8 22.7 218 521-784 65-290 (395)
472 PRK06358 threonine-phosphate d 99.5 7.3E-12 1.6E-16 142.3 24.7 281 523-857 57-353 (354)
473 PRK07865 N-succinyldiaminopime 99.5 4.6E-12 9.9E-17 144.6 23.0 284 515-854 61-363 (364)
474 PRK04260 acetylornithine amino 99.5 3.1E-11 6.6E-16 138.4 29.8 266 539-856 87-374 (375)
475 PRK07810 O-succinylhomoserine 99.5 1E-12 2.2E-17 151.2 17.3 210 522-777 72-287 (403)
476 PRK06702 O-acetylhomoserine am 99.5 8.2E-12 1.8E-16 143.7 24.3 144 522-684 63-211 (432)
477 PRK06460 hypothetical protein; 99.5 5.3E-12 1.2E-16 144.2 22.7 260 522-854 47-311 (376)
478 PF01041 DegT_DnrJ_EryC1: DegT 99.5 4.7E-12 1E-16 144.4 22.1 281 100-416 26-363 (363)
479 PRK06084 O-acetylhomoserine am 99.5 1.8E-11 3.9E-16 141.7 27.1 143 522-684 60-207 (425)
480 PRK07908 hypothetical protein; 99.5 2.4E-11 5.2E-16 137.9 27.7 297 60-416 28-342 (349)
481 PRK14807 histidinol-phosphate 99.5 3.7E-11 8E-16 136.4 29.2 299 59-416 27-347 (351)
482 PRK07590 L,L-diaminopimelate a 99.4 1.5E-11 3.2E-16 142.7 26.1 357 458-856 17-408 (409)
483 PRK06959 putative threonine-ph 99.4 1.5E-11 3.3E-16 138.8 25.0 273 523-862 56-336 (339)
484 PRK03967 histidinol-phosphate 99.4 1E-11 2.2E-16 140.1 23.5 272 523-858 58-333 (337)
485 PRK06855 aminotransferase; Val 99.4 2.7E-11 6E-16 141.3 27.6 312 515-859 72-429 (433)
486 PLN02607 1-aminocyclopropane-1 99.4 3.6E-11 7.8E-16 140.3 28.3 310 515-862 94-440 (447)
487 PRK05764 aspartate aminotransf 99.4 8.9E-11 1.9E-15 135.4 31.3 269 103-416 72-386 (393)
488 KOG0259 Tyrosine aminotransfer 99.4 4.7E-11 1E-15 128.1 26.4 320 506-860 96-434 (447)
489 PRK07505 hypothetical protein; 99.4 5.6E-11 1.2E-15 137.5 29.5 318 52-417 45-395 (402)
490 PRK08056 threonine-phosphate d 99.4 5.4E-11 1.2E-15 135.4 28.9 298 59-416 25-350 (356)
491 KOG1368 Threonine aldolase [Am 99.4 1.8E-12 3.8E-17 134.5 14.8 285 524-854 60-363 (384)
492 PLN02450 1-aminocyclopropane-1 99.4 3.4E-11 7.5E-16 141.5 27.9 307 516-860 86-431 (468)
493 TIGR01140 L_thr_O3P_dcar L-thr 99.4 2.4E-11 5.3E-16 136.7 25.5 262 102-416 50-330 (330)
494 TIGR03537 DapC succinyldiamino 99.4 7.4E-11 1.6E-15 133.9 29.6 264 108-416 49-348 (350)
495 PF00155 Aminotran_1_2: Aminot 99.4 1.6E-11 3.5E-16 139.9 24.3 269 103-415 48-363 (363)
496 PRK08088 4-aminobutyrate amino 99.4 7.6E-11 1.6E-15 137.3 29.9 295 523-860 87-424 (425)
497 COG2873 MET17 O-acetylhomoseri 99.4 8.3E-11 1.8E-15 126.3 27.3 275 524-858 66-366 (426)
498 PRK00854 rocD ornithine--oxo-a 99.4 3.1E-11 6.6E-16 139.7 26.5 276 99-416 83-396 (401)
499 PRK07269 cystathionine gamma-s 99.4 1.3E-11 2.8E-16 140.2 22.8 215 522-785 56-279 (364)
500 PRK00950 histidinol-phosphate 99.4 4.9E-11 1.1E-15 136.0 27.3 263 102-416 72-357 (361)
No 1
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-232 Score=1880.57 Aligned_cols=926 Identities=70% Similarity=1.149 Sum_probs=887.5
Q ss_pred CccccCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhC
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN 79 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~ 79 (946)
||+++|++|+|+|++++||++| .++++.+| ++++|.|+++|+.++|+||+.|++|+|+|||++++|++|+||+++|
T Consensus 67 ml~tlG~~dl~~l~~~~VP~~Ir~~~~l~~~---~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~vP~~I~RNilen 143 (1001)
T KOG2040|consen 67 MLDTLGYKDLDELIEKTVPKSIRLKRPLKMD---KPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTHVPAVILRNILEN 143 (1001)
T ss_pred HHHhcChhhHHHHHHhhcchhhcccchhcCC---CCcCHHHHHHHHHHHHhhhhHHHHhhccccccccCcHHHHHHhhhC
Confidence 8999999999999999999999 88889997 8999999999999999999999999999999999999999999999
Q ss_pred CccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH
Q 002263 80 PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI 159 (946)
Q Consensus 80 ~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~ 159 (946)
|+|||+|||||||||||+||.+.+||+|+++|||++.+|+||+|+||+++|||.|+.+.. |+++++|+..+||+++++
T Consensus 144 p~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~--krkk~vvd~~~hpqtlsV 221 (1001)
T KOG2040|consen 144 PGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN--KRKKFVVDSNCHPQTLSV 221 (1001)
T ss_pred CcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhc--ccceEEecCCCCcchhhh
Confidence 999999999999999999999999999999999999999999999999999999998866 678899999999999999
Q ss_pred HHHhhcCCCeEEEEeccccccccCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceE
Q 002263 160 CITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADI 239 (946)
Q Consensus 160 ~~~~a~~~gi~v~~~~~~~l~~i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi 239 (946)
++|+++++|++++..|.++.....+++.+|+||||++.|.+.|..++++.+|+.|.++++++|++++..+++|++|||||
T Consensus 222 ~~TRa~~~~i~v~~~~~~~~~~s~~~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDI 301 (1001)
T KOG2040|consen 222 VKTRAKGFGIKVVVSDIKEADYSSKDVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADI 301 (1001)
T ss_pred hhccccccceeEEecCHHHhhccccceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCcee
Confidence 99999999999988877654433567999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHH
Q 002263 240 VVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 319 (946)
Q Consensus 240 ~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~a 319 (946)
++||+|+||+||||||||+|||+|++++.|.||||+||+|+|+.|+++|+|+||||||||||+||||||||+|+|+|+|+
T Consensus 302 avGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANma 381 (1001)
T KOG2040|consen 302 AVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMA 381 (1001)
T ss_pred eeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC-HHHHHHHHHHcCCeeeeecCCeEEEE
Q 002263 320 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTAS 398 (946)
Q Consensus 320 a~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~~~~~lris 398 (946)
|+|+.|||++||++|++|++..+.+|..+|+..| .++.+.++||++.|+... ++++.++..+++|+++.+++++|.+|
T Consensus 382 AmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~ed~tigvs 460 (1001)
T KOG2040|consen 382 AMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKPFFDTLKIRCGCSAEEVLDRAAKRQINLRLVEDGTIGVS 460 (1001)
T ss_pred HHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhccccccceEEEEecCcHHHHHHHHHhhcCceEEeecCceEEe
Confidence 9999999999999999999999999999999998 899988999999999887 89999999999999999999999999
Q ss_pred eccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhh-----hccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCcc
Q 002263 399 FDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV-----ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKEL 473 (946)
Q Consensus 399 ~~~~~t~edid~ll~~l~~~~~~~~~~~~~~~~~-----~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~ 473 (946)
++|+.+++|++++++.|..+ |..++..+. ....|+.++|+++||+||+|+.++||++++|||++|.+||+
T Consensus 461 lDETv~~~DvddLl~vf~~~-----ss~~~~~E~~~~e~~~~~~s~f~Rts~~L~hpVFn~yhSEt~lvRYm~kLenKDl 535 (1001)
T KOG2040|consen 461 LDETVTEKDVDDLLWVFNEE-----SSVELVAESMGEECNGIPPSVFKRTSPYLTHPVFNSYHSETELVRYMKKLENKDL 535 (1001)
T ss_pred ecccccHHHHHHHHHHHccC-----ChHHHHHHhhhhhccCCCCcccccCCccccchhhhhcccHHHHHHHHHHhhccch
Confidence 99999999999999999965 444443322 12468899999999999999999999999999999999999
Q ss_pred CcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHH
Q 002263 474 SLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGL 553 (946)
Q Consensus 474 ~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l 553 (946)
++.++||||||||||+|+..+++|++|++|.++|||+|.|+.||+.+++.+++.+||++||+|..++|||+|++||+++|
T Consensus 536 SLvhSMiPLGSCTMKLNsttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL 615 (1001)
T KOG2040|consen 536 SLVHSMIPLGSCTMKLNSTTEMMPITWPEFANIHPFAPVEQAQGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGL 615 (1001)
T ss_pred hhhhhcccccceeeeccccceeccccchhhccCCCCCchHHHhhHHHHHHHHHHHhheeecccceeecCCCCcccchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCccccc
Q 002263 554 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVY 633 (946)
Q Consensus 554 ~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~ 633 (946)
++||+|++++|+++|+.||||.|+||+||++|+|+|++|+.|.++.+|.+|+.+|+++.++|+++++++|||||+|+|+|
T Consensus 616 ~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~Gvf 695 (1001)
T KOG2040|consen 616 RVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVF 695 (1001)
T ss_pred HHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccc
Q 002263 634 EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 713 (946)
Q Consensus 634 ~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~ 713 (946)
+++|+++|+++|+||++||+||||+|+++|+++||++|+||+|+|+|||||+||||||||+|+|++++|+.++||++.|.
T Consensus 696 E~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVv 775 (1001)
T KOG2040|consen 696 EEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 775 (1001)
T ss_pred cccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred cCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeE
Q 002263 714 STGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEF 793 (946)
Q Consensus 714 ~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~ 793 (946)
... ..+.....+.++++|||++++++++|+||++||..|+++.++.+++|||||+++|+.+|+++|.++++.+.|||
T Consensus 776 s~~---~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEF 852 (1001)
T KOG2040|consen 776 SPG---RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEF 852 (1001)
T ss_pred CCC---CCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeee
Confidence 321 11123446778888999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Q 002263 794 IVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNN 873 (946)
Q Consensus 794 v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~ 873 (946)
++|+++||+..|+++.||+|||+|+|||+|+++||++++|||+|||+++++|+||||++|.+|++||++||+|..|++.|
T Consensus 853 IlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ie~G~~dk~~n 932 (1001)
T KOG2040|consen 853 ILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIAQIEEGRQDKRNN 932 (1001)
T ss_pred eeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHHHHHccCCCcccC
Confidence 99999999888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCccCCCCCCCCCcccccccCCCcccCCcccCCCcccccccCCCccccccCchhhhHHH
Q 002263 874 VLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAQVAEE 940 (946)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (946)
+||+|||++++|+++.||||||||+||||+||++++||||+|+||||+||||||+|||||+++|+..
T Consensus 933 ~Lk~aPH~~~~v~s~~WdrpYsRE~AafP~p~lk~~KfWPtv~RvDd~YGD~nLvCTcppv~~~~~~ 999 (1001)
T KOG2040|consen 933 PLKMAPHPLEDVTSDNWDRPYSREYAAFPAPFLKENKFWPTVGRVDDAYGDRNLVCTCPPVEEYQSA 999 (1001)
T ss_pred cccCCCCCHHHhhhhccCCccchhhhcCCchhhhhcccCCcccccccccCccceeeeCCCchhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999754
No 2
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3.2e-210 Score=1850.96 Aligned_cols=921 Identities=56% Similarity=0.972 Sum_probs=860.7
Q ss_pred CccccCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhC
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN 79 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~ 79 (946)
||++||++|+||||+++||++| ++++|+|| +++||.|+++|++++++||+.+++|+|+|||+|++|++|+|+|++|
T Consensus 28 ML~~iG~~s~d~l~~~~iP~~ir~~~~l~lp---~~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~ 104 (954)
T PRK12566 28 MLDALGVASRAELIEQTVPPAIRLNRPLDLP---AALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLEN 104 (954)
T ss_pred HHHhcCccCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhC
Confidence 9999999999999988999999 88889998 7999999999999999999999999999999999999999999999
Q ss_pred CccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH
Q 002263 80 PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI 159 (946)
Q Consensus 80 ~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~ 159 (946)
|+|||+|||||||+|||+||+|+|||+|+++||||+.+|+||+|++||++|||+|+.+.+++++++|+|++.+||+++++
T Consensus 105 ~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v 184 (954)
T PRK12566 105 PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSV 184 (954)
T ss_pred chhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887644578999999999999999
Q ss_pred HHHhhcCCCeEEEEeccccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccce
Q 002263 160 CITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGAD 238 (946)
Q Consensus 160 ~~~~a~~~gi~v~~~~~~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaD 238 (946)
++|+++..|++++..+ ++. +++++++|++|+||++|.|.|+++|++++|++|++++|++|+++++++++|++||||
T Consensus 185 ~~t~~~~~g~~i~~~~---~~~~~~~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge~GAD 261 (954)
T PRK12566 185 LRTRAEGFGFELVVDA---VDNLAAHAVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTPPGELGAD 261 (954)
T ss_pred HHHhhhcCCcEEEEcc---hhhcCCCCEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCChhhcCCc
Confidence 9999999999999744 444 567899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 239 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 239 i~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
|+||++|+||+||+|||||+|||+++++++|+||||+||+|+|.+|+++|+|+|||||||||||||||||||+|+|+|++
T Consensus 262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~ 341 (954)
T PRK12566 262 VVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANI 341 (954)
T ss_pred EEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC-CHHHHHHHHHHcCCeeeeecCCeEEE
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTA 397 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-~~~~v~~~L~~~GI~~~~~~~~~lri 397 (946)
|++|+.|||++||++|+++++.+|+||+++|++.| +++..+++|++|++++. .+.++.++..++||+++.++++.+.+
T Consensus 342 a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~~fF~~~~v~~~~~~~~~~~~a~~~~~n~r~~~~~~~~~ 420 (954)
T PRK12566 342 AGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNRHFFDTLTLEVGGAQAAIIESAEAARINLRILGRGRLGV 420 (954)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCccceEEEEccCCHHHHHHHHHHCCCeeEEeCCCeEEE
Confidence 99999999999999999999999999999999988 99987899999999886 37889999999999999998899999
Q ss_pred EeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhh-hhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcC
Q 002263 398 SFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEE-VETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLC 476 (946)
Q Consensus 398 s~~~~~t~edid~ll~~l~~~~~~~~~~~~~~~~-~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~ 476 (946)
|++|++|.+|++.++++|...... .+.+.+... +...||+.++|+++|++||+|++++||.||+|||++|++||++++
T Consensus 421 s~de~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~~~~~~~p~~~~r~~~~~~~p~f~~~~SE~el~r~~~~La~kn~~~~ 499 (954)
T PRK12566 421 SLDETCDEATVARLFDIFLGADHG-LDVAALDQGALAEGIPAVLQRRTAYLQHPVFNAHHSETEMLRYLKQLENKDLALN 499 (954)
T ss_pred EeCCCCCHHHHHHHHHHhcCCCcc-cchhhhccccccccCchhhhcCCccccCcccccCCCHHHHHHHHHHHHhcCcCcc
Confidence 999999999999999999632110 011112110 112499999999999999999999999999999999999999999
Q ss_pred CccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHH
Q 002263 477 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVI 556 (946)
Q Consensus 477 ~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~ 556 (946)
++||||||||||+|++.+++|++|+||++.|||||.|++||++|+++|+++++|+||||+.++++|++|++||++++|++
T Consensus 500 ~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmai 579 (954)
T PRK12566 500 QSMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAI 579 (954)
T ss_pred cCcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccC
Q 002263 557 RAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 636 (946)
Q Consensus 557 r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~ 636 (946)
|.||.++|+.+|++||+|.++|++||.++.+.|++++.+++|++|.+|+++|+++++++++++++|++++||++|+++++
T Consensus 580 r~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~ 659 (954)
T PRK12566 580 RRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG 659 (954)
T ss_pred HHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecch
Confidence 99999999888999999999999999999999999999999999999999999999877789999999999999999867
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 637 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 637 i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
+++|+++||++|++++|||||+++++++..|+++|+|++++|+||||++|+|+||||+|++++++++.+++|+... .
T Consensus 660 V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~---~ 736 (954)
T PRK12566 660 IREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPV---V 736 (954)
T ss_pred HHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCC---c
Confidence 9999999999999999999999999999999999999999999999999999999999999999998888875431 1
Q ss_pred CC-CCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEE
Q 002263 717 GI-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIV 795 (946)
Q Consensus 717 d~-~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~ 795 (946)
|. +.+.+.++++++ ++++++++.+||+||.+||.+ +++.++.++.+|+|++++|++.+++.+.+.+++++|||++
T Consensus 737 d~~G~~~r~ga~S~~---~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii 812 (954)
T PRK12566 737 PVEGPDPNNGAVSAA---PWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECIL 812 (954)
T ss_pred CCCCCCCCCCceeec---ccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEE
Confidence 11 233334444454 457899999999999999999 9999999999999999999988888886555689999999
Q ss_pred ecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchh
Q 002263 796 DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVL 875 (946)
Q Consensus 796 ~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~~~ 875 (946)
++..+++..|++..+|+++|+++||++++++||+.++|||||||++|++|||+|+++|+.|++|+++|++|+||+++|+|
T Consensus 813 ~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v~~g~~~~~~n~l 892 (954)
T PRK12566 813 DLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGKVQEGNWPAEDNPL 892 (954)
T ss_pred EccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCcc
Confidence 99877655678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccCCCCCCCCCcccccccCCCcccCCcccCCCcccccccCCCccccccCchhhh
Q 002263 876 KGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAQV 937 (946)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (946)
||||||+.+|++ +|+||||||+|+||++|++++||||||+||||+||||||+|+|||+|+|
T Consensus 893 ~~apht~~~~~~-~w~~~y~r~~a~~p~~~~~~~k~wp~v~r~d~~~gdrnl~c~c~~~~~~ 953 (954)
T PRK12566 893 KRAPHTLADVTG-VWQRPYSIEQAVTPSAHARAHKYWPAVNRVDNVYGDRNLFCACVPVDDY 953 (954)
T ss_pred cCCCCchHHhhc-cCCCCcChhhcccCCCcccCCCcCCCcCCcCccccccccccCCCChhhc
Confidence 999999999998 8999999999999999999999999999999999999999999999987
No 3
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=3.1e-206 Score=1832.27 Aligned_cols=923 Identities=59% Similarity=1.004 Sum_probs=866.5
Q ss_pred CccccCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhC
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN 79 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~ 79 (946)
||++||++|+||||+++||++| ++++++|| +++||.|+++||++|+++|+.+++|+|+|+|+|++|++|.|+|++|
T Consensus 13 ML~~iG~~s~d~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~ 89 (939)
T TIGR00461 13 MLKTMGYSDLNALIEQLVPPNILKRRPLQLE---APSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLEN 89 (939)
T ss_pred HHHhcCCCCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhC
Confidence 9999999999999999999999 88889998 7899999999999999999999999999999999999999999999
Q ss_pred CccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH
Q 002263 80 PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI 159 (946)
Q Consensus 80 ~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~ 159 (946)
|+|||+|||||||+|||+||+|+|||+|+++||||+.+|+||+|++|+++||++||.+.+++++++|+|++.+||+++.+
T Consensus 90 p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v 169 (939)
T TIGR00461 90 PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSV 169 (939)
T ss_pred chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999876544668999999999999999
Q ss_pred HHHhhcCCCeEEEEeccccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccce
Q 002263 160 CITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGAD 238 (946)
Q Consensus 160 ~~~~a~~~gi~v~~~~~~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaD 238 (946)
++++++..|++++.+|+++|+. + ++++|++|+||++|.++|+++|++++|++|++++|++|+++++++++|++||||
T Consensus 170 ~~t~a~~~g~~v~~~~~~~l~~~~--~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaD 247 (939)
T TIGR00461 170 LHTRAKPFGIEVIVVDCSDIKKAV--DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGAD 247 (939)
T ss_pred HHHHHHhcCcEEEEEcHHHHhhcC--CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCc
Confidence 9999999999999999988876 5 689999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 239 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 239 i~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
|+|+++|+||+||+|||||+|||+|+++++|+||||++|+|+|.+|+++|+|+|||||||||||||||||||+|++++++
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~ 327 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANV 327 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC--CHHHHHHHHHHcCCeeeeecCCeEE
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--DAHAIASAAYKIEMNLRVVDSNTVT 396 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~--~~~~v~~~L~~~GI~~~~~~~~~lr 396 (946)
|++|+.+||++||++|+++++.+++||+++|++.| +++..+++|++|+|+++ .+.++.++|.++||+++...++.++
T Consensus 328 a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~gi~l~~~~~~~i~ 406 (939)
T TIGR00461 328 ASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKTWFDTLTVKVGNGISSELLKAAEEFNINLRAVDTTTVG 406 (939)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCccceEEEEeCCCCHHHHHHHHHHCCCeeeecCCCEEE
Confidence 99999999999999999999999999999999988 99988889999999887 3889999999999999886678999
Q ss_pred EEeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcC
Q 002263 397 ASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLC 476 (946)
Q Consensus 397 is~~~~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~ 476 (946)
+|+||++|++||+.|+++|........+.+.+...+...||++++|+++++.+|+|++++||.||+|||++|++||++++
T Consensus 407 ~s~~E~~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~L~~kn~~~~ 486 (939)
T TIGR00461 407 IALDETTTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRYLHRLESKDLALN 486 (939)
T ss_pred EEeecCCCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999996321100011111111112499999999999999999999999999999999999999999
Q ss_pred CccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHH
Q 002263 477 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVI 556 (946)
Q Consensus 477 ~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~ 556 (946)
++|+++||||||+|+.+++++++|++|++||||||.+++||++|+++|+++|+|+++|||.+++++++||+||+++++++
T Consensus 487 ~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~ai 566 (939)
T TIGR00461 487 NSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVI 566 (939)
T ss_pred ccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999669999999999999999999999999999999999999899999
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccC
Q 002263 557 RAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 636 (946)
Q Consensus 557 r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~ 636 (946)
|.||+++|+++|++|++|.++||+||+++++.|++++.||++++|.+|+++|++++++++++|++||+|+||++|+++++
T Consensus 567 R~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~ 646 (939)
T TIGR00461 567 RSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPT 646 (939)
T ss_pred HHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceeccc
Confidence 99999999888999999999999999999999999999999999999999999999877789999999999999999966
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 637 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 637 i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
|++|+++||++|++++|||||+++++++.+|+++|+|++++|.||+|++|||+||||+|++++++++.+++|++.++.+.
T Consensus 647 I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~ 726 (939)
T TIGR00461 647 IQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMI 726 (939)
T ss_pred HHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876643
Q ss_pred CCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEe
Q 002263 717 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVD 796 (946)
Q Consensus 717 d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~ 796 (946)
+. .++++.++.+++.++|++++++++|+||++||++|++++++.++++|+|++++|++.+++++++++++++|||+++
T Consensus 727 d~--~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~~~~~~~hEfv~~ 804 (939)
T TIGR00461 727 TG--IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVGTLKHVAHECILD 804 (939)
T ss_pred cC--CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccCCCCceeEEEEEe
Confidence 32 1233444445544678999999999999999999999999999999999999999989998877667899999999
Q ss_pred cccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhc
Q 002263 797 LRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLK 876 (946)
Q Consensus 797 ~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~~~~ 876 (946)
++++++..|++..+|+|+|+|+||++++++||+.++++|+|||.+|++|||+|+++|.+|.+|+++|++|+||++||+||
T Consensus 805 ~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~~~~g~~~~~~~~l~ 884 (939)
T TIGR00461 805 LRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINALVAGQPKGQDNPLK 884 (939)
T ss_pred ccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHh
Confidence 98776667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccCCCCCCCCCcccccccCCCcccCCcccCCCcccccccCCCcccccc
Q 002263 877 GAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTL 931 (946)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (946)
|||||+.+|++++|+||||||+||||++|++++||||||+||||+||||||+|+|
T Consensus 885 ~ap~~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~wp~v~r~d~~~gd~nl~c~c 939 (939)
T TIGR00461 885 NAPHSLQSLITSEWWHPYSREEAAYPAPFLRYNKFWPTVARLDDTYGDRNLICSC 939 (939)
T ss_pred hCCCCHHHhhcCCCCCCcChhhccCCCcccccCCcCCCcCCccccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999
No 4
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=6.9e-196 Score=1766.91 Aligned_cols=938 Identities=87% Similarity=1.366 Sum_probs=866.9
Q ss_pred CccccCCCCHHHHhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC
Q 002263 1 MSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP 80 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~ 80 (946)
||++||++|+||||+++||++|+.++++||.+.+++||.|+++||++|+.+|+.+.+|+|+|+|+|++|++|.++|++|+
T Consensus 50 ML~~ig~~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~ 129 (993)
T PLN02414 50 MAEYCGFDSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENP 129 (993)
T ss_pred HHHhcCccCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhCh
Confidence 99999999999999888999995557888633368999999999999999999999999999999999999999999999
Q ss_pred ccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHH
Q 002263 81 AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDIC 160 (946)
Q Consensus 81 ~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~ 160 (946)
+|||+|||||||+|||+||+++|||+++|+|+||+++|+||+|++|+++|+++|+.++.++++++|||++.+||+++.+|
T Consensus 130 ~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~ 209 (993)
T PLN02414 130 GWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVC 209 (993)
T ss_pred HHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998876446689999999999999999
Q ss_pred HHhhcCCCeEEEEeccccccccCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEE
Q 002263 161 ITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIV 240 (946)
Q Consensus 161 ~~~a~~~gi~v~~~~~~~l~~i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~ 240 (946)
++++++.|++++.++.++....++++.++++|+||++|.+.|+++|+++||++|++++|++|+++++.+++|+++||||+
T Consensus 210 ~t~a~~~GieV~~v~~~~~~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iVaad~lal~~l~~pge~GADi~ 289 (993)
T PLN02414 210 QTRADGLGLEVVVADEKDFDYSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVMATDLLALTMLKPPGEWGADIV 289 (993)
T ss_pred HHhhhhcCCEEEEecchhhccccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEEEECHHHhcCCCCHhhccCcEE
Confidence 99999999999999876532234568889999999999999999999999999999999999999999988999999999
Q ss_pred EeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 241 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 241 v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
++++|+|++|+|||||++||||+++++.|.+|||++|+|+|.+|+++|+++|||||||||||+|||||||+|++.+.+++
T Consensus 290 vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~ 369 (993)
T PLN02414 290 VGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAA 369 (993)
T ss_pred EECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeeecCCeEEEEec
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFD 400 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~~~~lris~~ 400 (946)
+|+.+||++|+++++++++.+++|++++|++.| +++..+++|++|+|+.+.+.++.++|.++||+++....+.+|+|+|
T Consensus 370 ~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~~f~~vt~~~~~~~~v~~~L~~~gI~l~~~~~~~lrvs~~ 448 (993)
T PLN02414 370 MYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLPFFDTVKVKCSDADAIADAAAKVGINLRVVDANTVTVSFD 448 (993)
T ss_pred HHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCcCeEEEecCCHHHHHHHHHHCCCeeEEecCCeEEEEee
Confidence 999999999999999999999999999999888 9998778899999988668889999999999999877788999999
Q ss_pred cCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCccc
Q 002263 401 ETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMI 480 (946)
Q Consensus 401 ~~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~ 480 (946)
++||++|||+|+++|..........+.+...+...||+.++|++++|+||+|++++||+||+||+++|++||++++++||
T Consensus 449 e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~~~ 528 (993)
T PLN02414 449 ETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEHELLRYLHRLQNKDLSLVHSMI 528 (993)
T ss_pred ccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHHHHHHHHHHHhhcccccccCCc
Confidence 99999999999999974311110112121111135999999999999999999999999999999999999999999999
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYH 560 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~ 560 (946)
||||||||+|+.+++.+++|++|...|||+|.++.||+++++.++++++++++|++.+++++++|+|||++++++++.|+
T Consensus 529 plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~ 608 (993)
T PLN02414 529 PLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYH 608 (993)
T ss_pred cCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHH
Q 002263 561 KARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEI 640 (946)
Q Consensus 561 ~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I 640 (946)
+++|+.+|++||+|.++|++|++++.+.|++++.+|++++|.+|+++|+++++++.++|++||+|+||++|.+++||++|
T Consensus 609 ~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI 688 (993)
T PLN02414 609 LSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEI 688 (993)
T ss_pred hccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHH
Confidence 88887788999999999999999999999999999999999999999999998665689999999999988887689999
Q ss_pred HHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCC
Q 002263 641 CKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 720 (946)
Q Consensus 641 ~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~ 720 (946)
+++||++|++|||||||+++++++..|+++|+|++++|.||||+.|+|+||||+|++++++++.+++|++.++.+..+.+
T Consensus 689 ~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~ 768 (993)
T PLN02414 689 CDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPR 768 (993)
T ss_pred HHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987765432221
Q ss_pred CCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccc
Q 002263 721 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGL 800 (946)
Q Consensus 721 ~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~ 800 (946)
|.....++.+..++||+++++.+||+||.+||.+|+++.+++++.+|+|++++|++.+++.+.+++++++|||+++++.+
T Consensus 769 r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l 848 (993)
T PLN02414 769 PEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPF 848 (993)
T ss_pred ccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecccc
Confidence 21112233344468899999999999999999999999999999999999999998888888776678999999999877
Q ss_pred cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhccCCC
Q 002263 801 KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 880 (946)
Q Consensus 801 ~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~~~~~~~~ 880 (946)
++.+|+++.+|+++|+++||++++++||++++|||+|||++|++|||+|+++|+.|++|+++|++|+||++||+||||||
T Consensus 849 ~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~~~~g~~~~~~~~l~~ap~ 928 (993)
T PLN02414 849 KNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIADIENGKADRENNVLKGAPH 928 (993)
T ss_pred ccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhcCCC
Confidence 65567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCcccccccCCCcccCCcccCCCcccccccCCCccccccCchhhhHH
Q 002263 881 PPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAQVAE 939 (946)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (946)
|+.+|++++|+||||||+|+||++|++++||||||+||||+||||||+|+|||+-+-++
T Consensus 929 ~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~~~~v~r~d~~~gd~~l~c~c~~~~~~~~ 987 (993)
T PLN02414 929 PPSLLMADKWDKPYSREYAAFPAPWVRASKFWPTTGRVDNVYGDRNLVCTLPSAAEEEE 987 (993)
T ss_pred ChHHhhcCCCCCCcChhhccCCCcccccCccCCCccccccccccccccccCCCccchHH
Confidence 99999999999999999999999999999999999999999999999999999876443
No 5
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=6.9e-195 Score=1770.79 Aligned_cols=923 Identities=62% Similarity=1.059 Sum_probs=864.1
Q ss_pred CccccCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhC
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN 79 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~ 79 (946)
||++||++|+||||+++||++| ++++++|| +++||.|+++||++|++||+.+++|+|+|||+|++|++|+|+|++|
T Consensus 25 ml~~~g~~s~~~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~ 101 (954)
T PRK05367 25 MLAALGADSLDALIDQAVPASIRLAEPLDLP---AALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILEN 101 (954)
T ss_pred HHHhcCCCCHHHHhhhhCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhC
Confidence 9999999999999999999999 88889998 7999999999999999999999999999999999999999999999
Q ss_pred CccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH
Q 002263 80 PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI 159 (946)
Q Consensus 80 ~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~ 159 (946)
|+|||+|||||||+|||+||+++|||+++|+|+||+++|+||++++|+++|+++|+++++++++++|||++.+||+++.+
T Consensus 102 ~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v 181 (954)
T PRK05367 102 PAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDV 181 (954)
T ss_pred cchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887533469999999999999999
Q ss_pred HHHhhcCCCeEEEEecccc-ccccCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccce
Q 002263 160 CITRADGFDIKVVVSDLKD-IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGAD 238 (946)
Q Consensus 160 ~~~~a~~~gi~v~~~~~~~-l~~i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaD 238 (946)
|++++++.|+++++++.++ +. ++++.+|++|+||++|.+.|+++|+++||++|++++|+++.++++++.+|+++|||
T Consensus 182 ~~t~a~~~G~ev~~~~~~~d~~--~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaD 259 (954)
T PRK05367 182 LRTRAEPLGIEVVVGDAAKALD--HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGAD 259 (954)
T ss_pred HHHHHHhCCCEEEEecCccCCC--cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCC
Confidence 9999999999999998753 32 45788999999999999999999999999999999998888899999999999999
Q ss_pred EEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 239 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 239 i~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
|+++++|+|++||||||||+|||+++++++|+||||++|+++|.+|+++|+|++||||||||||+|||||||+|++++++
T Consensus 260 i~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~ 339 (954)
T PRK05367 260 IAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVM 339 (954)
T ss_pred EEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC-HHHHHHHHHHcCCeeeeecCCeEEE
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTA 397 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~~~~~lri 397 (946)
+++|+.|||++|+++|+++++.+++||+++|++.| +++..+.+|++++++.+. +.+|.++|.++||+++...++.||+
T Consensus 340 a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~~~f~~~~~~~~~~~~~i~~~l~~~gi~~~~~~~~~l~i 418 (954)
T PRK05367 340 ASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHDSFFDTLTVEVGGDAAAVLARALAAGINLRRVDDDHVGI 418 (954)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCCCCCCeEEEeCCCCHHHHHHHHHHCCceeccccCCEEEE
Confidence 99999999999999999999999999999998887 998877888999998764 8899999999999998876789999
Q ss_pred EeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhh----hccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCcc
Q 002263 398 SFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV----ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKEL 473 (946)
Q Consensus 398 s~~~~~t~edid~ll~~l~~~~~~~~~~~~~~~~~----~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~ 473 (946)
|+||++|++||++|+++|+... . ..+.+.... ...||+.++|+++++.+|+|++++||.|++|||++|++||+
T Consensus 419 s~~e~~t~~did~l~~~l~~~~-~--~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~l~~kn~ 495 (954)
T PRK05367 419 SLDETTTREDLAALLAVFGGAA-L--DVDALDADVADASASALPAALLRTSAYLTHPVFNRYHSETEMMRYLRRLEDKDL 495 (954)
T ss_pred EecccCCHHHHHHHHHHHcccc-c--chhhhhhhhcccccccCCHHHhcCCcccCCcccCCCCCHHHHHHHHHHHHhcCc
Confidence 9999999999999999998431 0 112111101 12599999999999999999999999999999999999999
Q ss_pred CcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHH
Q 002263 474 SLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGL 553 (946)
Q Consensus 474 ~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l 553 (946)
+++++||+||||||++|+.+++.+++|++|.+||||||.|++||++++++++++|++++||++.+++++++|++||++++
T Consensus 496 ~~~~~~i~lGsct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL 575 (954)
T PRK05367 496 ALDRSMIPLGSCTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGL 575 (954)
T ss_pred CcccceeeCCcCCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCccccc
Q 002263 554 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVY 633 (946)
Q Consensus 554 ~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~ 633 (946)
+++|.|+.++|+.+|++||+|+++|++|++++.+.|++++.++++.+|.+|+++|+++++++++++++||+++|+++|++
T Consensus 576 ~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~ 655 (954)
T PRK05367 576 LAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVF 655 (954)
T ss_pred HHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeee
Confidence 99999998888777889999999999999999999999999999989999999999999865568999999999999998
Q ss_pred ccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccc
Q 002263 634 EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 713 (946)
Q Consensus 634 ~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~ 713 (946)
+.||++|+++||++|+++||||||++++.++.+|+++|+|++++|+||||++|||+||||+|++++++++.+++|++.++
T Consensus 656 e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~ 735 (954)
T PRK05367 656 EETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQ 735 (954)
T ss_pred cCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccC
Confidence 65899999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeE
Q 002263 714 STGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEF 793 (946)
Q Consensus 714 ~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~ 793 (946)
.+. ...+.+.++++++|+++++.++|+|+.++|.+|+++++++++.+|+|++++|++.+++.|.+++++++|||
T Consensus 736 ~~~------~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~ 809 (954)
T PRK05367 736 IAG------GETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHEC 809 (954)
T ss_pred cCC------CCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccce
Confidence 432 12234667777888999999999999999999999999999999999999999888988877667899999
Q ss_pred EEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Q 002263 794 IVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNN 873 (946)
Q Consensus 794 v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~ 873 (946)
+++++++++..+++..+|+|+|.++||++++++||+.+++||+|||++|++|||+|+++|+.|.+|+.+|++|+||++||
T Consensus 810 i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~~~~~~~~~~~~ 889 (954)
T PRK05367 810 ILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDEVEAGEWPAEDN 889 (954)
T ss_pred EEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Confidence 99997666555788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCccCCCCCCCCCcccccccCCCcccCCcccCCCcccccccCCCccccccCchhhhH
Q 002263 874 VLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAQVA 938 (946)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (946)
+|||||||+.+|++++|+||||||+|+||++|++++||||||+||||+||||||+|+|||+|+|+
T Consensus 890 ~~~~ap~~~~~~~~~~w~~~y~r~~~~~p~~~~~~~k~~~~~~r~~~~~gd~~~~c~~~~~~~~~ 954 (954)
T PRK05367 890 PLKNAPHTAADLVADEWDHPYSREQAAFPLPSLRANKYWPPVGRIDNVYGDRNLVCSCPPIEAYA 954 (954)
T ss_pred hhhhCCCCHHHhccCCCCCCCCHHHhcCCCcccccCCcCCCcCcccccccceeeecCCCChhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999884
No 6
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-113 Score=912.47 Aligned_cols=459 Identities=60% Similarity=1.038 Sum_probs=428.8
Q ss_pred CCCCCCccCCC-----CCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHH
Q 002263 445 PYLTHPVFNKY-----HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQ 519 (946)
Q Consensus 445 ~~~~~p~~~~~-----~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~ 519 (946)
.+|++|+|++. +||.||+||+++|+++|+.++++||||||||||+|+.+++.+++|++|.++|||||+++.||++
T Consensus 29 ~~L~~~~~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l 108 (496)
T COG1003 29 EYLPHPVFRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYL 108 (496)
T ss_pred hhcCcHHhhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHH
Confidence 45555666666 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
+++.++++||++++|||.+++||++||+||++++++||+||+++|+++|++||||+||||+||++|+|+|++||.|++++
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~ 188 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE 188 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNL 679 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~ 679 (946)
+|.+|++||+++++ ++|+++|+|||||+|+|+++|.+||+++|++|++||+||||+|++.|+.+||++|+||+|+|+
T Consensus 189 ~G~VDlddLk~k~~---~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNL 265 (496)
T COG1003 189 NGNVDLDDLRAKAE---DNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNL 265 (496)
T ss_pred CCCccHHHHHHHhc---cceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeec
Confidence 99999999999997 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCcceeEEEecccCCCCCCCccc-cCCCC-CCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 680 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV-STGGI-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~-~~~d~-~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
|||||+||||||||+|+|+++++|++|+|++.+. ...++ ......++++ .+.++||+++++++||+||++||.+|++
T Consensus 266 HKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g-~~~a~~Gs~~il~~a~~YI~~mG~~GL~ 344 (496)
T COG1003 266 HKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIG-VSAAPYGSASILPIAWAYIRMMGADGLK 344 (496)
T ss_pred ccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccce-eeccccCcchHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999985421 11111 1111223333 3445999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC--CCCEEEE
Q 002263 758 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--VPGTLMI 835 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p--~~~~lri 835 (946)
+.++.+++||||++++|++.|+++|.+.+ ++.||||+|.+++++++|+++.||+|||+|+|||+||++|| |.++|||
T Consensus 345 ~ase~AvLNANYia~rL~~~y~~~y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMI 423 (496)
T COG1003 345 QASEVAVLNANYIARRLKGYYPVPYTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMI 423 (496)
T ss_pred HHHHHHHHhHHHHHHHhhhcCccccCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceee
Confidence 99999999999999999999999997754 79999999999888889999999999999999999999999 9999999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhccCCCCCCccCCCCCCCCCcccccccCCCcccCCc
Q 002263 836 EPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAK 910 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (946)
+|||++||+|+|+|+++|++|++|++++.+| +.+++++++|||+.+++.+.+|+|||+|++++||+++++.+|
T Consensus 424 EPTEsEsk~eLDrf~dami~I~~Ea~~~~~~--~~~~~P~~~a~~r~~e~~a~~~~~p~~R~~~~~p~~~~~~~k 496 (496)
T COG1003 424 EPTESESKEELDRFIDAMIAIREEADAVPAG--PLKDNPLNTAPHRLDELLAARWDHPYSREEAAYPLGKLRADK 496 (496)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--ccccCcccCCcchHHHHhhccCCCCeeeehccccccccccCC
Confidence 9999999999999999999999999999888 779999999999999999999999999999999999988665
No 7
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-106 Score=865.05 Aligned_cols=415 Identities=56% Similarity=0.899 Sum_probs=392.4
Q ss_pred CccccCCCCHHHHhhccCCccc-cc--CCCCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHH
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RI--DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIM 77 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~--~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~ 77 (946)
||++||++|+||||+++||++| .+ ..+.+| +++||.|+++++++++++|+.+.+|+|+|||+|++|++|+|+|+
T Consensus 22 ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~~---~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnil 98 (450)
T COG0403 22 MLAAIGVSSLDELFSQDIPPSIRKKLDTLLPLP---KPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNIL 98 (450)
T ss_pred HHHHcCCCCHHHHhhccCCHHHHhcccccCCCC---CCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhh
Confidence 9999999999999998999999 44 223444 88999999999999999999999999999999999999999999
Q ss_pred hCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHH
Q 002263 78 ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTI 157 (946)
Q Consensus 78 ~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~ 157 (946)
+||+|||+|||||||||||+||+|+|||++++|||||+.+|+||||++||++|||+||.|.+++++++|+|+..+||+++
T Consensus 99 e~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~ 178 (450)
T COG0403 99 ENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTL 178 (450)
T ss_pred cCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987656899999999999999
Q ss_pred HHHHHhhcCCCeEEEEeccccccc----cCCCEeEEEEEcCCCce-eecchHHHHHHHHhCCcEEEEEecCccccCCCCC
Q 002263 158 DICITRADGFDIKVVVSDLKDIDY----KSGDVCGVLVQYPGTEG-EVLDYGDFIKNAHANGVKVVMATDLLALTILKPP 232 (946)
Q Consensus 158 ~~~~~~a~~~gi~v~~~~~~~l~~----i~~~t~~v~v~~pn~~G-~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~ 232 (946)
++++|+++++|++++..+.++++. .+.++++|++||||++| .+.|+++|.+.+|++|++++|++|+++++++++|
T Consensus 179 ~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pP 258 (450)
T COG0403 179 DVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPP 258 (450)
T ss_pred HHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCc
Confidence 999999999999999998876543 24589999999999999 6668999999999999999999999999999999
Q ss_pred CCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 233 GELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 233 ~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
++|||||+||++|+||+||+|||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|||||||||||||||||||+|
T Consensus 259 Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQ 338 (450)
T COG0403 259 GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQ 338 (450)
T ss_pred cccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CEEEcCCCCcCeEEEecC-C-HHHHHHHHHHcCCeeee
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCA-D-AHAIASAAYKIEMNLRV 389 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~-~-~~~v~~~L~~~GI~~~~ 389 (946)
+|+|++|++|++|||++|+++|++|+++++++|+++|++++ |+++..+.+|++|+++++ . ...+.++....||+++.
T Consensus 339 aLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~ 418 (450)
T COG0403 339 ALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGINLRR 418 (450)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecchhHHHHHHHHHHhcCCceee
Confidence 99999999999999999999999999999999999999662 499987789999999998 4 77888888889999999
Q ss_pred ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 390 VDSNTVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 390 ~~~~~lris~~~~~t~edid~ll~~l~~~ 418 (946)
+++.++.+|++|++|++||+.|+++|+..
T Consensus 419 ~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 419 VDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 98889999999999999999999999753
No 8
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=2.8e-94 Score=802.05 Aligned_cols=412 Identities=44% Similarity=0.680 Sum_probs=324.2
Q ss_pred CccccCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhC
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN 79 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~ 79 (946)
||++||++|+||||++.||+++ ++++++|| +++||.|++||+++|++||....+|+|+|+|+|++|++|.+++++|
T Consensus 14 ML~~iG~~sieeL~~~~IP~~i~~~~~~~lp---~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~ 90 (429)
T PF02347_consen 14 MLDAIGVKSIEELFDSDIPEEIRLKKPLNLP---EPLSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSR 90 (429)
T ss_dssp HHHHCT-SSTGGGG-TTS-GGG-SS-------------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCC
T ss_pred HHHhcCCCCHHHHhhhhCCHhhcCCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccC
Confidence 9999999999999977899999 88899998 7899999999999999999999999999999999999999889999
Q ss_pred CccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH
Q 002263 80 PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI 159 (946)
Q Consensus 80 ~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~ 159 (946)
++|||+|||||||+|||+||+|+|||+|+|+||||+.+|+|++|++||++||++|+.+.+++++++|+|++..||+++.+
T Consensus 91 ~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v 170 (429)
T PF02347_consen 91 PEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAV 170 (429)
T ss_dssp HHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHH
T ss_pred hhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999887654568999999999999999
Q ss_pred HHHhhcCCCeEEEEeccccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccce
Q 002263 160 CITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGAD 238 (946)
Q Consensus 160 ~~~~a~~~gi~v~~~~~~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaD 238 (946)
++++++..|++++.++.++-.. .++++++|++|+||++|.++|+++|++++|++|+++++++|+++++++++|++||||
T Consensus 171 ~~t~a~~~g~~iv~~~~~~~~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~~ad~~aL~~l~~Pge~GAD 250 (429)
T PF02347_consen 171 LRTYAAPLGIEIVEVPLDEDGTTDDDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIVGADPNALGGLKSPGEYGAD 250 (429)
T ss_dssp HHHHCCHCCEEEEEE-BBTTCSB-STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEECGGCCGCCTC--GGGGT-S
T ss_pred HHHhhhhCCeEEEEecccccCCccccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEEecCHHHHhCcCChhhcCcc
Confidence 9999999999999998764322 247899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 239 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 239 i~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
|+|+++|+||+||+|||||+|||+|+++++|+||||+||.|+|.+|+++|+|+|||||||||||||||||||+|+|+|++
T Consensus 251 I~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~ 330 (429)
T PF02347_consen 251 IVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALA 330 (429)
T ss_dssp EEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHH
T ss_pred EEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeeecCCeEE
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVDSNTVT 396 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~~~~lr 396 (946)
|++|+.+||++||++++++++.+|+||+++|+++.++.+.+..++++|.+..+. ..++.+++...|++++....+.+.
T Consensus 331 a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~~~~~~~l 410 (429)
T PF02347_consen 331 AAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEGGLNLRYPDDGALL 410 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT----EEEGGG-SSEEE
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhcCCCccccCCCeEE
Confidence 999999999999999999999999999999999742554455677777776654 345666666667777666677999
Q ss_pred EEeccCCCHHHHHHHHHHH
Q 002263 397 ASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 397 is~~~~~t~edid~ll~~l 415 (946)
+|+||.+|++|||+|+++|
T Consensus 411 i~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 411 ICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EE--TT--HHHHHHHHH--
T ss_pred EEccCCCCHHHHHHHHhcC
Confidence 9999999999999999976
No 9
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=1.8e-68 Score=595.07 Aligned_cols=403 Identities=34% Similarity=0.527 Sum_probs=295.5
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCcccc
Q 002263 402 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 481 (946)
Q Consensus 402 ~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~ 481 (946)
.+|++|++++++.++.+ |+|||++ ++||+++++++++ .+| .++||.|++||+++|+++|.. .+++++
T Consensus 5 ~~t~~~~~~ML~~iG~~-----sieeL~~---~~IP~~i~~~~~~-~lp---~~~sE~e~~r~~~~la~kN~~-~~~fiG 71 (429)
T PF02347_consen 5 PPTDEDIQEMLDAIGVK-----SIEELFD---SDIPEEIRLKKPL-NLP---EPLSEYELLRHLERLASKNKS-YTSFIG 71 (429)
T ss_dssp ---HHHHHHHHHHCT-S-----STGGGG----TTS-GGG-SS--------------HHHHHHHHHHHHTTS---TTS---
T ss_pred CcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHhhcCCCCC-CCC---CCCCHHHHHHHHHHHHhcCCC-CCcccc
Confidence 46899999999999988 8999984 5899999998875 665 569999999999999999998 788999
Q ss_pred ceeeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHH
Q 002263 482 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 482 lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~ 558 (946)
+|+|+|++|+.+.+..++|++|++ |||||| |++||++|+++|+|+++|+|||||. +++++.+|++|| +++|+.|.
T Consensus 72 ~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQp-EisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aE-a~~ma~r~ 149 (429)
T PF02347_consen 72 AGSYTHYVPAVIDRNILSRPEFYTAYTPYQP-EISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAE-AMLMAVRA 149 (429)
T ss_dssp CTTT-----HHHHH-HHCCHHCCCS-STTSG-GGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHH-HHHHHHHH
T ss_pred ccccCceeChhhcCccccChhhhccCCCCCc-HHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHH-HHHHHHHh
Confidence 999999999999996699999987 999999 9999999999999999999999996 479999999998 88888876
Q ss_pred HHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccc
Q 002263 559 YHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 634 (946)
Q Consensus 559 y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~ 634 (946)
.+ .++++|++|.+.|+.+.+ ++...|++++.+++++++..| + +++++||+++||++|+|+
T Consensus 150 ~~-----~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~---~~~a~v~vq~Pn~~G~~e 213 (429)
T PF02347_consen 150 TK-----RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D---DDTAAVMVQNPNTFGVFE 213 (429)
T ss_dssp HT-----T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S---TTEEEEEEESS-TTSB--
T ss_pred cc-----cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c---cCeEEEEeecCCCCceEe
Confidence 32 146799999999999887 466799999999998888877 3 899999999999999999
Q ss_pred cCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcccc
Q 002263 635 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 714 (946)
Q Consensus 635 ~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~ 714 (946)
|+++|++++|++|+++++ ++|+++++++.+||++|+||++++ ||+|++||+||||++|++++++++++++||++||.
T Consensus 214 -d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~ 290 (429)
T PF02347_consen 214 -DIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQ 290 (429)
T ss_dssp -THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEE
T ss_pred -eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecc
Confidence 699999999999999999 999999999999999999999776 89999999999999999999999999999999998
Q ss_pred CCCC-CCC-------------CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 002263 715 TGGI-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 780 (946)
Q Consensus 715 ~~d~-~~~-------------~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v 780 (946)
+.|. |++ +|+|+|+||||+ +++++.+|++|+.++|++|+++++++++++|+|++++|++.+.+
T Consensus 291 t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn---qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~ 367 (429)
T PF02347_consen 291 TKDADGKRAFVLTLQTREQHIRREKATSNICTN---QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGL 367 (429)
T ss_dssp EEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBE
T ss_pred cccccccceeeeccccccccccccchhhhhhhh---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 7665 543 278999999996 88888999999999999999999999999999999999987555
Q ss_pred eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 781 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 781 ~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
.+. +++++++++.... . ..+.+ |.++++..+. ..++..+.++||+||.+|++|||+|+++|
T Consensus 368 ~~~---~~~f~e~v~~~~~-------~-~~~~~-l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 368 PFD---NPFFFEFVVVFSK-------D-KEVEE-LLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp CSS---SSSBSSEEEEESS---------HHHHH-HHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ccC---CCCceeeeeecCC-------c-HHHHH-HHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 553 3567777776541 1 22222 5555554431 12344679999999999999999999875
No 10
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=4.4e-61 Score=562.80 Aligned_cols=446 Identities=45% Similarity=0.778 Sum_probs=383.4
Q ss_pred ccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCccc
Q 002263 434 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPAD 513 (946)
Q Consensus 434 ~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e 513 (946)
.+||+++++++++ .+| + +||.|++||+++|+++|...+++++++|+|++++++.+.....++++|.+||||||..
T Consensus 32 ~~ip~~~~~~~~~-~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~ 106 (481)
T PRK04366 32 SLLPEELLRKEPP-ELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEE 106 (481)
T ss_pred ccCCHHHhcCCCC-CCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChh
Confidence 4799999998876 666 3 9999999999999999998778999999999999999999888888998999999944
Q ss_pred ccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 514 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 514 ~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
.+||.++++.++++++++++|++.+++++++|+.+++.++++++.+...+|++++++||+++..|+++...+.+.|++++
T Consensus 107 ~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv 186 (481)
T PRK04366 107 TVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVV 186 (481)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEE
Confidence 99999999999999999999999888899999988866555566665556654677999999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
.++++++|.+|+++|+++++ ++|++|++++||++|+++.|+++|+++||++|++++||+|++.++.+...|+++|+|
T Consensus 187 ~v~~~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD 263 (481)
T PRK04366 187 EIPSNEDGLVDLEALKAAVG---EDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFD 263 (481)
T ss_pred EeecCCCCCcCHHHHHhhcc---cCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCC
Confidence 99998889999999999996 789999999999999984379999999999999999999998776666689999999
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCC-C-CCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG-I-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d-~-~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
+++++.||||+.|+|+||||+|++++++++.+++|++.++..+. + ....++....... +..++++.+.++|.||..+
T Consensus 264 ~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~-a~t~~~l~~~~a~~~l~~~ 342 (481)
T PRK04366 264 VVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVR-AFYGNFGVLVRAYAYIRSL 342 (481)
T ss_pred EEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcc-cccCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987754221 1 0000111111111 1124677888999999999
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC--C
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--V 829 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p--~ 829 (946)
|.+|+++++++++.+++||+++|++++++.+. ++++|++++++..|. ..|++..+++++|.++||+++...+| .
T Consensus 343 G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~---~~~~~~~~~~~~~~~-~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~ 418 (481)
T PRK04366 343 GAEGLREVSEDAVLNANYLKARLKDIYDLPYD---RPCMHEFVLSGKKLK-ETGVRTLDIAKRLLDYGFHPPTIYFPLIV 418 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhCcccCC---CCeeEEEEEECcccc-ccCCCHHHHHHHHHHCCccCCcccccccc
Confidence 99999999999999999999999987666552 367889999875442 23568899999999999998876666 3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhccCCCCCCccCCCCCCCCCcccccccCCCcccCC
Q 002263 830 PGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFA 909 (946)
Q Consensus 830 ~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (946)
.+++|+++|+.+|++|||+|+++|+++.+++.+ +|+.+|+|||++
T Consensus 419 ~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~--------~~~~~~~~p~~~--------------------------- 463 (481)
T PRK04366 419 PEALMIEPTETESKETLDAFIAAMKQIAEEAKE--------NPELVKEAPHNT--------------------------- 463 (481)
T ss_pred CCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh--------CcHhHhhCCCCC---------------------------
Confidence 679999999999999999999999999999998 999999999999
Q ss_pred cccCCCcccccccCCCcccccc
Q 002263 910 KFWPATGRVDNVYGDRNLICTL 931 (946)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~ 931 (946)
||+|+|++.+.|.++.+|
T Consensus 464 ----~~~~~~~~~~~~~~~~~~ 481 (481)
T PRK04366 464 ----PVRRLDEVKAARKPVLRW 481 (481)
T ss_pred ----CCCCcccccccccCcCCC
Confidence 999999999999998876
No 11
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-59 Score=501.44 Aligned_cols=409 Identities=24% Similarity=0.332 Sum_probs=352.1
Q ss_pred CHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCccccce
Q 002263 404 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 483 (946)
Q Consensus 404 t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lG 483 (946)
..+|.+.|+++++.+ |+|+|+. ++||++++.+ ...++..++++||.|+++++++++++|.. ..++|+.|
T Consensus 15 ~~~d~~~ML~~iG~~-----Sld~L~~---~~IP~~Ir~~--~~~~~~~~~~~sE~e~l~~l~~ia~kN~~-~~sfiG~G 83 (450)
T COG0403 15 SSADQQEMLAAIGVS-----SLDELFS---QDIPPSIRKK--LDTLLPLPKPLSEYEALAELKEIASKNKV-FTSFIGAG 83 (450)
T ss_pred ChHHHHHHHHHcCCC-----CHHHHhh---ccCCHHHHhc--ccccCCCCCCCCHHHHHHHHHHHHhcCch-hhhhccCc
Confidence 349999999999998 9999984 5899999865 11222346789999999999999999984 46789999
Q ss_pred eeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHH
Q 002263 484 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYH 560 (946)
Q Consensus 484 s~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~ 560 (946)
++.+++|+.+.+..+++|+|++ |||||| |++||.+|+++|+|+++++||||+. ++++..+++.+| |++|+.|.
T Consensus 84 yY~~~~P~vI~rnile~pewyTaYTPYQp-EISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE-Am~ma~r~-- 159 (450)
T COG0403 84 YYDTYTPPVILRNILENPEWYTAYTPYQP-EISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE-AMLMAKRV-- 159 (450)
T ss_pred ccCCcCcHHHHHHhhcCccccccCCCCch-hhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHH-HHHHHHHh--
Confidence 9999999999978799999988 999999 9999999999999999999999996 468888888887 88888775
Q ss_pred HhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccC
Q 002263 561 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 636 (946)
Q Consensus 561 ~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~ 636 (946)
.+ .++++++|+...|+.+-.. ++.+|++|+.++.+ |+++|+++ + ..++.+++++|||++|.+++|
T Consensus 160 -~k--~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~--~~~~~gv~vQyP~~~G~~~~d 228 (450)
T COG0403 160 -TK--KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-D--DGDVFGVLVQYPNTFGIVEED 228 (450)
T ss_pred -hc--CcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-c--ccCeEEEEEecCCCCCccchh
Confidence 22 2478999999866555443 55688999999875 88899888 4 369999999999999966668
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 637 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 637 i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
+++|.+.+|++|++++| ++++.+++.+.+||++|+||++++. +.|++|++||||++|+++|++++.+++|||++|.+.
T Consensus 229 ~~~l~~~~h~~~al~~v-~aDplaL~LL~pPGe~GADIvvG~~-QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~ 306 (450)
T COG0403 229 LRALIEAAHSAGALVIV-AADPLALGLLKPPGEFGADIVVGSA-QRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSV 306 (450)
T ss_pred HHHHHHHHhhcCCEEEE-EechhHhhccCCccccCCceEEecC-cccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeee
Confidence 99999999999999999 8999999999999999999999997 889999999999999999999999999999999988
Q ss_pred CC-CCC-------------CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC
Q 002263 717 GI-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP 779 (946)
Q Consensus 717 d~-~~~-------------~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~ 779 (946)
|. |++ +|+|+|+||||+ |++++.+|.+|+.++|++|+++++++++.++.|++++|++. ++
T Consensus 307 D~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~ 383 (450)
T COG0403 307 DAAGKRAFRLALQTREQHIRREKATSNICTN---QALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVE 383 (450)
T ss_pred cCCCCchhhhhHHHHHHHHhhhccchhhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Confidence 76 654 379999999996 89999999999999999999999999999999999999953 55
Q ss_pred eeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 780 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 780 v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+.+ ..+|.+|+++++. .....+.++....|+..+.+. ..++.+++||.+|+++|+.|++++...
T Consensus 384 ~~~----~~fFdt~~v~~~~------~~~~~l~~~~~~~G~~L~~~~---~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 384 LVF----DHFFDTFTVRVPE------EVAEALLAAAIAGGINLRRVD---ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ecc----ccceeeEEEecch------hHHHHHHHHHHhcCCceeeec---CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 543 3688899988751 235667777777888776554 468999999999999999999998754
No 12
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=1.8e-55 Score=529.90 Aligned_cols=401 Identities=20% Similarity=0.291 Sum_probs=348.1
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCcccc
Q 002263 402 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 481 (946)
Q Consensus 402 ~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~ 481 (946)
.-+++|+++|++.++.+ |+|+|+. +.||+++++++++ .+| +++||.|++|||++|+++|... .++|+
T Consensus 4 g~~~~~~~~ML~~iG~~-----s~d~l~~---~~iP~~i~~~~~l-~lp---~~~sE~e~~~~~~~la~~N~~~-~~fig 70 (939)
T TIGR00461 4 GPSPSDQKKMLKTMGYS-----DLNALIE---QLVPPNILKRRPL-QLE---APSKEYEALAHLKKIASKNHKF-KSYIG 70 (939)
T ss_pred CcCHHHHHHHHHhcCCC-----CHHHHhh---ccCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCc-cccCC
Confidence 45789999999999987 8999985 4499999988875 665 6789999999999999999874 57889
Q ss_pred ceeeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhCCCcc--cccCCchHHHHHHHHHHHHH
Q 002263 482 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 482 lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~r~ 558 (946)
.|.+.|++|+.+.+..+++++|++ |||||| |++||.+|+++++|+++++|+||+.+ ++++.+|+.+| +++++.|.
T Consensus 71 ~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~-EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aE-a~~~a~~~ 148 (939)
T TIGR00461 71 MGYYGTILPPVIQRNLLENPGWYTAYTPYQP-EISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAE-AMALSFNV 148 (939)
T ss_pred CCcCCCcCChHHHHHHHhCchhhhcCCCCCh-hhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHH-HHHHHHHh
Confidence 999999999999977799999876 999999 89999999999999999999999964 89999999888 77776542
Q ss_pred HHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccc
Q 002263 559 YHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 634 (946)
Q Consensus 559 y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~ 634 (946)
+++ ++++|+|+++.|+.... +++..|++++.++ +++|++++ +++++++++||++|.++
T Consensus 149 ---~~~--~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~-----~~~~v~~q~Pn~~G~ie 210 (939)
T TIGR00461 149 ---SKK--KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV-----DVFGCLLQYPATDGSIL 210 (939)
T ss_pred ---hcC--CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC-----CEEEEEEECCCCCeEEe
Confidence 333 46889999998866653 3578999999884 45555544 58999999999999999
Q ss_pred cCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcccc
Q 002263 635 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 714 (946)
Q Consensus 635 ~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~ 714 (946)
|+++|++++|++|+++++ ++++++++++.+||++|+||+++ .||+|++|||||||+.|++++++++.+++||+++|+
T Consensus 211 -d~~~i~~~~h~~gal~~~-~ad~~al~ll~~Pge~GaDi~vg-~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~ 287 (939)
T TIGR00461 211 -DYKQLIDALHSHKSLVSV-AADLMALTLLTPPGHYGADIVLG-SSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGV 287 (939)
T ss_pred -cHHHHHHHHHHcCCEEEE-EechHHhCCcCCHHHcCCcEEee-CCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeE
Confidence 899999999999999999 68999999999999999999965 579999999999999999999999999999999997
Q ss_pred CCCC-CCC-------------CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CC
Q 002263 715 TGGI-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP 779 (946)
Q Consensus 715 ~~d~-~~~-------------~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~ 779 (946)
+.|. |++ +|+++|+|||++ +++.+.+|++|+.++|++|+++++++++.++.||+++|++. ++
T Consensus 288 s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~---qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~ 364 (939)
T TIGR00461 288 SKDALGNTALRLALQTREQHIRRDKATSNICTA---QVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHE 364 (939)
T ss_pred EecCCCCccceeecccccccccccccCcchhHH---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 6544 321 378999999985 89999999999999999999999999999999999999884 66
Q ss_pred eeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 780 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 780 v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
+.+ .++|++|++++. +.+++++.++|.++||+++... .+.+++|+||.+|++||+.|++++.
T Consensus 365 ~~~----~~fF~~~~v~~~------~~~~~~i~~~~~~~gi~l~~~~---~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 365 LIN----KTWFDTLTVKVG------NGISSELLKAAEEFNINLRAVD---TTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ccC----CCccceEEEEeC------CCCHHHHHHHHHHCCCeeeecC---CCEEEEEeecCCCHHHHHHHHHHhc
Confidence 653 268899999874 2468899999999999976422 4789999999999999999999995
No 13
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=4e-54 Score=514.07 Aligned_cols=399 Identities=19% Similarity=0.267 Sum_probs=345.8
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCcccc
Q 002263 402 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 481 (946)
Q Consensus 402 ~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~ 481 (946)
.-|++|+++|++.++.+ |+|+|+. .+||+++|.++++ .+| +++||.|++++++++++||..+ +++|+
T Consensus 19 g~~~~~~~~ML~~iG~~-----s~d~l~~---~~iP~~ir~~~~l-~lp---~~~sE~e~~~~~~~~a~kN~~~-~~fiG 85 (954)
T PRK12566 19 GPDAAEQQAMLDALGVA-----SRAELIE---QTVPPAIRLNRPL-DLP---AALDEQAALARLRGYAEQNQVW-TSLIG 85 (954)
T ss_pred CCCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCc-ccccc
Confidence 44789999999999987 8999984 5899999888775 665 6899999999999999999874 58899
Q ss_pred ceeeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHH
Q 002263 482 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 482 lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.|++.+.+|+.+....+++++|++ |||||| |++||.+|+++|+|+|+++||||+. +++++.+++.+| |++|+.|.
T Consensus 86 ~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQp-EisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~ 163 (954)
T PRK12566 86 MGYHGTVTPTVILRNVLENPGWYTAYTPYQP-EIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRV 163 (954)
T ss_pred ccccCCcCcHHHHHHHHhCchhhhcCCCCCc-hhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHH
Confidence 999999999999777789999987 999999 9999999999999999999999995 479999999888 88887653
Q ss_pred HHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccc
Q 002263 559 YHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 634 (946)
Q Consensus 559 y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~ 634 (946)
.+ .++++|+|+++.|+..-.. ++..|++++. ++++++++ +++++|+++|||++|.++
T Consensus 164 ---~~--~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~---~~~~~v~vq~P~~~G~i~ 224 (954)
T PRK12566 164 ---AK--SKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAA---HAVFGALLQYPDTHGEIR 224 (954)
T ss_pred ---hh--cCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCC---CCEEEEEEECCCCceEEc
Confidence 22 1367899998865333221 4478999885 34455554 689999999999999998
Q ss_pred cCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcccc
Q 002263 635 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 714 (946)
Q Consensus 635 ~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~ 714 (946)
|+++|++++|++|+++++ ++++.+++++.+||++|+||++++ +|.|++|++||||+.|++++++++++++|||++|.
T Consensus 225 -d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~-~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~ 301 (954)
T PRK12566 225 -DLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGS-TQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGV 301 (954)
T ss_pred -cHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeC-CCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccce
Confidence 899999999999999765 899999999999999999999876 59999999999999999999999999999999999
Q ss_pred CCCC-CCC-------------CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CC
Q 002263 715 TGGI-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP 779 (946)
Q Consensus 715 ~~d~-~~~-------------~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~ 779 (946)
+.|. |++ +|+|+|+||||+ |++++.+|.+|+.++|++|+++++++++.+|.||+++|++. ++
T Consensus 302 s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~---qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~ 378 (954)
T PRK12566 302 SRDARGNTALRMALQTREQHIRREKANSNICTA---QVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIK 378 (954)
T ss_pred eecCCCCeeeehhhhHHHHHhhhccccchhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 8776 543 379999999996 89999999999999999999999999999999999999884 66
Q ss_pred eeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 780 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 780 v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
+.+ .++|++|++++. .++.++.++..++|+...... .+.+.|++.|.+|.+|++.+++++.
T Consensus 379 ~~~----~~fF~~~~v~~~-------~~~~~~~~~a~~~~~n~r~~~---~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 379 RLN----RHFFDTLTLEVG-------GAQAAIIESAEAARINLRILG---RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ccc----CCccceEEEEcc-------CCHHHHHHHHHHCCCeeEEeC---CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 653 368999999863 257789999999999987654 4789999999999999999999985
No 14
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.7e-53 Score=498.76 Aligned_cols=381 Identities=20% Similarity=0.305 Sum_probs=324.4
Q ss_pred hhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCc-ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChh
Q 002263 14 IDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA 91 (946)
Q Consensus 14 ~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~-~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~ 91 (946)
++++||+++ ++++++|| + +||.|+++|+++|+++|.. ..+|+|.|++..++|+.+.+++.++++| ++||||||
T Consensus 30 ~~~~ip~~~~~~~~~~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~ 104 (481)
T PRK04366 30 LESLLPEELLRKEPPELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQP 104 (481)
T ss_pred ccccCCHHHhcCCCCCCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCC
Confidence 567899999 88889998 4 9999999999999999987 5699999988888999999999999998 59999999
Q ss_pred h-hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHH-hc---cccC--CCCEEEEcCCCCHHHHHHHHHhh
Q 002263 92 E-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NN---IQKG--KKKTFIIASNCHPQTIDICITRA 164 (946)
Q Consensus 92 e-~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la-~~---~~~~--~gd~vvv~~~~Hps~~~~~~~~a 164 (946)
| ++||+++.++++|+++++++|++ ++++++++++..+++.++ .+ ..++ ++++||+++..||++..+++
T Consensus 105 e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~--- 179 (481)
T PRK04366 105 EETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA--- 179 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH---
Confidence 9 99999999999999999999997 588998887766665432 21 1211 34599999999999998863
Q ss_pred cCCCeEEEEeccc--------cccc-cCCCEeEEEEEcCCCceee-cchHHHHHHHHhCCcEEEE-EecCccccCCCCCC
Q 002263 165 DGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVM-ATDLLALTILKPPG 233 (946)
Q Consensus 165 ~~~gi~v~~~~~~--------~l~~-i~~~t~~v~v~~pn~~G~i-~di~~i~~~a~~~gal~~v-~a~~~al~~l~~~~ 233 (946)
..|++++.++.+ +|++ ++++|++|++++||++|.+ .|+++|+++||++|++++| ++|+.++..+.+|+
T Consensus 180 -~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~ 258 (481)
T PRK04366 180 -MAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPG 258 (481)
T ss_pred -HcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCcc
Confidence 468898887662 3555 7789999999999999988 5899999999999999999 67766633334789
Q ss_pred CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 234 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 234 ~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
++|||++++++ |+|++|+|+||||+||+++++++.++||++++|. + ++ +|++++| |+|||||+++|+ ++
T Consensus 259 ~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~--~--g~-~~~l~~~-r~~~i~r~~a~t----~~ 328 (481)
T PRK04366 259 DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEK--D--GD-RYRLDYD-RPKSIGRVRAFY----GN 328 (481)
T ss_pred ccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeec--c--CC-ceeeccc-ccccCCCccccc----Cc
Confidence 99999999999 9999999999999999999999999999999984 2 44 6999998 999999999985 35
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CCCCcCeEEEecC-----C--HHHHHHHHHHcC
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA-----D--AHAIASAAYKIE 384 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~~~~~i~~~-----~--~~~v~~~L~~~G 384 (946)
++.++++.+|+.++|++|+++++++++.+++||+++|+++ +++. ..++++++.|... + +.+++++|.++|
T Consensus 329 ~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~G 406 (481)
T PRK04366 329 FGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYG 406 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCC
Confidence 6778888889999999999999999999999999999986 3332 3345566666532 2 789999999999
Q ss_pred Ceeee-----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 385 MNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 385 I~~~~-----~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
|+++. ...+++|+|+|++||++|||+|+++|..
T Consensus 407 i~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~ 444 (481)
T PRK04366 407 FHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQ 444 (481)
T ss_pred ccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHH
Confidence 98752 2357899999999999999999999974
No 15
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-52 Score=509.33 Aligned_cols=402 Identities=19% Similarity=0.271 Sum_probs=343.6
Q ss_pred ccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCcc
Q 002263 400 DETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSM 479 (946)
Q Consensus 400 ~~~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~ 479 (946)
+..+|++|+++|+++++.+ |+|+|+. +.||+++|+++++ .+| +++||.|++||+++|+++|..+ +++
T Consensus 14 ~i~~~~~~~~~ml~~~g~~-----s~~~l~~---~~iP~~i~~~~~l-~lp---~~~sE~e~~~~~~~la~~N~~~-~~~ 80 (954)
T PRK05367 14 HIGPSAADQQAMLAALGAD-----SLDALID---QAVPASIRLAEPL-DLP---AALSEAEALAELRAIASKNKVF-RSY 80 (954)
T ss_pred CCCcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCC-Ccc
Confidence 4457899999999999987 8999985 4599999988875 665 6799999999999999999874 588
Q ss_pred ccceeeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhCCCcc--cccCCchHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVI 556 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~ 556 (946)
|+.|++.++.|+.+....+++++|++ |||||| |++||.+|++.++|+++++|+|++.+ ++++++|+.+| +++++.
T Consensus 81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~-EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~e-a~~~a~ 158 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQP-EISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAE-AMALAK 158 (954)
T ss_pred cCCCCCCCcCcHHHHHHHHhCcchhhccCCCCh-HHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHH-HHHHhh
Confidence 99999999888888777789999876 999999 89999999999999999999999964 78889888877 777766
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccc
Q 002263 557 RAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGV 632 (946)
Q Consensus 557 r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~ 632 (946)
+. .++ ++++|++++..|+.+... ++..|++|+.++.+.+. + + ++++++++++||++|.
T Consensus 159 ~~---~~~--~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~--~--------~---~~~~~vlvq~p~~~G~ 220 (954)
T PRK05367 159 RV---SKS--KSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKAL--D--------H---DDVFGVLLQYPGTSGE 220 (954)
T ss_pred hh---ccC--CCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCC--C--------c---ccEEEEEEecCCCCee
Confidence 52 222 258999999988777653 56799999999975421 1 2 5789999999999999
Q ss_pred cccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcc
Q 002263 633 YEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 712 (946)
Q Consensus 633 ~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v 712 (946)
++ |+++|+++||++|++++||+ +.++++.+.+|+++|+|++++|.|||. +|+||||||.|++++++++.+++|++++
T Consensus 221 i~-d~~~i~~~ah~~Gal~~vda-~~~Al~~l~~pge~GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~~~r~lpgriv 297 (954)
T PRK05367 221 VR-DYTALIAAAHARGALVAVAA-DLLALTLLTPPGEMGADIAVGSAQRFG-VPMGFGGPHAAYFAVRDAYKRSMPGRIV 297 (954)
T ss_pred ec-cHHHHHHHHHHcCCEEEEEe-hhhhccCCCChhhcCCCEEEeeCcccC-CCCCCCCCCEEEEEECHHHHhhCCCCee
Confidence 99 89999999999999999985 666888889999999999999999876 9999999999999999999999999999
Q ss_pred ccCCCC-CC-------------CCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-
Q 002263 713 VSTGGI-PA-------------PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 777 (946)
Q Consensus 713 ~~~~d~-~~-------------~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~- 777 (946)
|++.|. +. .+++++|+|+|++ +++.++++++|+.++|++|++++++++..+++|++++|++.
T Consensus 298 G~s~d~~g~~~~~lalqtReqhiRrekaTsNict~---qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G 374 (954)
T PRK05367 298 GVSVDAAGNPALRLALQTREQHIRREKATSNICTA---QVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG 374 (954)
T ss_pred eeecccCCCcccccccccccccccccccccccchH---HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 976543 21 1468999999985 78888899999999999999999999999999999999773
Q ss_pred CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 778 YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 778 ~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
+++.. ..+++++++++. .++.+|.++|.++||+++... .+.+|+|++|++|++|||+|+++|.
T Consensus 375 ~~~~~----~~~f~~~~~~~~-------~~~~~i~~~l~~~gi~~~~~~---~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 375 LEVVH----DSFFDTLTVEVG-------GDAAAVLARALAAGINLRRVD---DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred cccCC----CCCCCeEEEeCC-------CCHHHHHHHHHHCCceecccc---CCEEEEEecccCCHHHHHHHHHHHc
Confidence 55542 245677777753 368899999999999986442 4789999999999999999999997
No 16
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=3.8e-51 Score=478.29 Aligned_cols=409 Identities=38% Similarity=0.644 Sum_probs=362.4
Q ss_pred CccccCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCc---ceeecCCCCCCCCCcHHHHHHH
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNI 76 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~---~~~~~G~g~~~~~~p~~i~~~i 76 (946)
||+++|++|+|||++ .||+.+ ++.+++|| ++.||.++++++.+++++|.. ..+++|.|.+++.+|..+. .+
T Consensus 15 ~~~~~~~~~~~~~~~-~~p~~~~~~~~~~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~-~~ 89 (447)
T PRK00451 15 MLDAIGVKSIDELFA-DIPEELRLKRPLDLP---PGLSEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVD-HI 89 (447)
T ss_pred HHHHhCCCCHHHHHH-hCCHHHHhCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHH-HH
Confidence 899999999999995 699999 77788898 567999999999999988854 5678999999999999985 77
Q ss_pred HhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHH
Q 002263 77 MENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQT 156 (946)
Q Consensus 77 ~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~ 156 (946)
+.+++|+++|+||+++.++|.++++.|+++++++++|++.+++++++|+|++++++++++... +|++|++++..|+++
T Consensus 90 ~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~--~g~~Vlv~~~~~~~~ 167 (447)
T PRK00451 90 ISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT--KRKKVLVSGAVHPEY 167 (447)
T ss_pred HhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--CCCEEEEeCccCHHH
Confidence 778899999999999999999999999999999999999999999999999999988887544 789999999999999
Q ss_pred HHHHHHhhcCCCeEEEEeccc-------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccC
Q 002263 157 IDICITRADGFDIKVVVSDLK-------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI 228 (946)
Q Consensus 157 ~~~~~~~a~~~gi~v~~~~~~-------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~ 228 (946)
...++.+++..|++++.++.+ ++++ ++++|++|++++||.+|.+.|+++|+++||++|++++|+.|..+++.
T Consensus 168 ~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g~ 247 (447)
T PRK00451 168 REVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLGL 247 (447)
T ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhcc
Confidence 999988887789999988764 3555 77899999999999999999999999999999999998666667777
Q ss_pred CCCCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCc
Q 002263 229 LKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 308 (946)
Q Consensus 229 l~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni 308 (946)
+..++++|+|++++++|+|+.|+.+|||++||+++++++++.+|++++|++.+..+..+|.+.++.+++++||+++|+|+
T Consensus 248 ~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (447)
T PRK00451 248 LKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNI 327 (447)
T ss_pred CCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccc
Confidence 77789999999999999999999999999999999999999999999999766667777888888999999999999999
Q ss_pred cchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC-HHHHHHHHHHcCCee
Q 002263 309 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNL 387 (946)
Q Consensus 309 ~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~ 387 (946)
|+++++.++.++.++.+++++|++++.+++.+++++++++|++++++++....++..++++++. ..++.++|.++||..
T Consensus 328 ~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~~~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 328 CTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPKPAEEVNEALLEKGILG 407 (447)
T ss_pred cccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCCCHHHHHHHHHhcCCCC
Confidence 9998888777777788899999999999999999999999999855888754555555666543 789999999998864
Q ss_pred e----eec---CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 388 R----VVD---SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 388 ~----~~~---~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. ... .+.+|+|+++++|++|+++|+++|.
T Consensus 408 ~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~ 443 (447)
T PRK00451 408 GYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALG 443 (447)
T ss_pred CcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 2 111 3689999999999999999999996
No 17
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=8.9e-49 Score=478.44 Aligned_cols=403 Identities=20% Similarity=0.273 Sum_probs=342.3
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCcccc
Q 002263 402 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 481 (946)
Q Consensus 402 ~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~ 481 (946)
.+|++|+++|++.++.+ |+|+|+. ++||+++ |.+++ .+|.|++++||.|++|||++|+.+|... .++++
T Consensus 41 ~~~~~~~~~ML~~ig~~-----s~d~l~~---~~iP~~i-~~~~l-~lp~~~~~~sE~e~~~~~~~la~kN~~~-~~fiG 109 (993)
T PLN02414 41 SATPEEQKAMAEYCGFD-----SLDALID---ATVPKSI-RLDSM-KLSKYDEGLTESQMLEHMKSLASKNKVF-KSYIG 109 (993)
T ss_pred CcCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHH-hcCCC-CCCCCCCCCCHHHHHHHHHHHHhcCCcc-ccccC
Confidence 35899999999999987 8999984 5899999 44554 7776668999999999999999999863 46788
Q ss_pred ceeeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHH
Q 002263 482 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 482 lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.|.|.+++|+.+....+++++|++ |||||| |++||.+|.++++|+++++|+|++. +++++++++.+| +++++.+.
T Consensus 110 ~G~y~~~~P~~v~~~i~~~~~~~TaytPYqa-EisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaae-a~~~a~~~ 187 (993)
T PLN02414 110 MGYYNTHVPPVILRNILENPGWYTQYTPYQA-EIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAE-AMAMCNNI 187 (993)
T ss_pred CCCCCccCCHHHHHHHHhChHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHH-HHHHHHhc
Confidence 899999999999777789999866 999999 9999999999999999999999986 578888888777 77776542
Q ss_pred HHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccc
Q 002263 559 YHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 634 (946)
Q Consensus 559 y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~ 634 (946)
.+| ++++||+++..|+.+-.. ++..|++|+.++.+.. | .. .++++++++++||++|.+.
T Consensus 188 ---~~g--~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~---~~~v~~vlvq~P~~~G~v~ 250 (993)
T PLN02414 188 ---LKG--KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YS---SGDVCGVLVQYPATDGEVL 250 (993)
T ss_pred ---ccC--CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cc---cCceEEEEEecCCCCeEEc
Confidence 333 468899999988877654 5568999999987431 1 11 2578899999999999998
Q ss_pred cCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcccc
Q 002263 635 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 714 (946)
Q Consensus 635 ~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~ 714 (946)
|+++|+++||++|++++| +||+.+++++.+|+++|+|+++++.|||. +|+|||||++|++++++++.+.+|++++|+
T Consensus 251 -dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~~r~~PgriVG~ 327 (993)
T PLN02414 251 -DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEYKRLMPGRIIGV 327 (993)
T ss_pred -CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHHHhhCCCcccCc
Confidence 899999999999999999 99999999988899999999999999985 999999999999999999999999999998
Q ss_pred CCCC-CC---------C----CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CC
Q 002263 715 TGGI-PA---------P----EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP 779 (946)
Q Consensus 715 ~~d~-~~---------~----~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~ 779 (946)
+.|. |. | +++++|+|+|++ +++.+..+.+|+.++|++|++++++++..++.|++++|++. ++
T Consensus 328 s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~---qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~ 404 (993)
T PLN02414 328 SVDSSGKPALRMAMQTREQHIRRDKATSNICTA---QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQ 404 (993)
T ss_pred ccCCCCCcccccccccccchhhhcccccchhHH---HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 6543 21 1 268999999985 78888888899999999999999999999999999999764 55
Q ss_pred eeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 780 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 780 v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
+.. .+++++|+|+++ +..++.++|.++||.+.... .+.+|+|+++.+|++|||+|+++|..
T Consensus 405 ~~~----~~~f~~vt~~~~--------~~~~v~~~L~~~gI~l~~~~---~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 405 VQS----LPFFDTVKVKCS--------DADAIADAAAKVGINLRVVD---ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred cCC----CCCcCeEEEecC--------CHHHHHHHHHHCCCeeEEec---CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 532 257788888753 35889999999999876543 46899999999999999999999974
No 18
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=390.38 Aligned_cols=397 Identities=22% Similarity=0.301 Sum_probs=335.6
Q ss_pred CHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCccccce
Q 002263 404 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 483 (946)
Q Consensus 404 t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lG 483 (946)
++.|..++++.++.+ ++++|.+ ..+|.+++.++++ .+| ++++|.|+++++..++++|.. .+++|++|
T Consensus 60 ~~~dq~~ml~tlG~~-----dl~~l~~---~~VP~~Ir~~~~l-~~~---~~~~E~eml~~l~~ia~kNk~-~ksfIGmG 126 (1001)
T KOG2040|consen 60 SPTDQQQMLDTLGYK-----DLDELIE---KTVPKSIRLKRPL-KMD---KPLCESEMLQHLEDIASKNKI-WKSFIGMG 126 (1001)
T ss_pred CchHHHHHHHhcChh-----hHHHHHH---hhcchhhcccchh-cCC---CCcCHHHHHHHHHHHHhhhhH-HHHhhccc
Confidence 567889999999987 7788865 6799999998875 554 789999999999999999974 57899999
Q ss_pred eeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHH
Q 002263 484 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYH 560 (946)
Q Consensus 484 s~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~ 560 (946)
+++..+|+.+.+....+++|++ |+|||| |++||.++.+.++|.++++|||++. +++...+++.|| |+.++.|.
T Consensus 127 Yyn~~vP~~I~RNilenp~W~TqYTPYQ~-EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaE-Am~l~~~~-- 202 (1001)
T KOG2040|consen 127 YYNTHVPAVILRNILENPGWYTQYTPYQA-EISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAE-AMALCNRI-- 202 (1001)
T ss_pred cccccCcHHHHHHhhhCCcceeccCCCch-hhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHH-HHHHHHhh--
Confidence 9999999999999999999987 999999 9999999999999999999999985 578888888887 77776663
Q ss_pred HhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccC
Q 002263 561 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 636 (946)
Q Consensus 561 ~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~ 636 (946)
.+|.++++....|+-+-.. +..+|++++..+. ++.. ...+++++++++||++.|.+. |
T Consensus 203 -----~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~--------~~~~----~s~~~v~gvlvQYP~t~G~i~-d 264 (1001)
T KOG2040|consen 203 -----NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDI--------KEAD----YSSKDVSGVLVQYPDTEGSVL-D 264 (1001)
T ss_pred -----cccceEEecCCCCcchhhhhhccccccceeEEecCH--------HHhh----ccccceeEEEEEcCCCCCccc-C
Confidence 3566788888766655443 3456777655432 2221 113679999999999999998 8
Q ss_pred HHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 637 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 637 i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
..++.+.+|+.|.++++ ++++.++..+.+||++|+||+++|. +.|++|+|+|||+.||++|++.+.+.+||+++|.+.
T Consensus 265 ~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk 342 (1001)
T KOG2040|consen 265 FDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK 342 (1001)
T ss_pred HHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccc-cccCccccCCCchHHHHHHHHHHHhhCCCceEeeee
Confidence 99999999999999888 7888899999999999999999986 889999999999999999999999999999999887
Q ss_pred CC-CCC-------------CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCee
Q 002263 717 GI-PAP-------------EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL 781 (946)
Q Consensus 717 d~-~~~-------------~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~ 781 (946)
|. |+. +|+++|+||||+ |++++.++.+|..++|++|++++++++...+-+|+..|++. .++.
T Consensus 343 D~~gk~a~RLALQTREQHIrRDKATSNICTA---QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~ 419 (1001)
T KOG2040|consen 343 DALGKEAYRLALQTREQHIRRDKATSNICTA---QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQ 419 (1001)
T ss_pred cccccHHHHHHHHHHHHHhhhhccchhhhHH---HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhc
Confidence 76 431 378999999996 89999999999999999999999999999999999999864 5553
Q ss_pred eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 782 FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 782 ~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
. .++|..+-+.+ +.+.+++.++..+++|....+. .+++-+++.|..+++|+|.++..+.
T Consensus 420 ~----k~fFDTLkI~~-------~~s~~~~l~rA~~~~iNlr~~e---d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 420 H----KPFFDTLKIRC-------GCSAEEVLDRAAKRQINLRLVE---DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred c----ccccceEEEEe-------cCcHHHHHHHHHhhcCceEEee---cCceEEeecccccHHHHHHHHHHHc
Confidence 2 24555555554 3478999999999988876544 5899999999999999999999886
No 19
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=373.07 Aligned_cols=388 Identities=21% Similarity=0.309 Sum_probs=307.5
Q ss_pred CCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcce-eecCCCCCCCCCcHHHHHHHHhCCccc
Q 002263 6 GLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYK-SFIGMGYYNTHVPPVILRNIMENPAWY 83 (946)
Q Consensus 6 g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~~~-~~~G~g~~~~~~p~~i~~~i~~~~~~~ 83 (946)
|++..++-....+|..+ ++.+ .+| ..||.|++||+.+|++||.... .++-.|.+...+++.+.+.....|+|
T Consensus 19 ~~~l~~~~~~~~L~~~~~r~~~-~~P----e~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f- 92 (496)
T COG1003 19 GYSLPEQVVEEYLPHPVFRRYP-PLP----EHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEF- 92 (496)
T ss_pred ccccccccchhhcCcHHhhcCC-CCc----cccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccch-
Confidence 44444444445567777 4443 336 7999999999999999998763 46667766777999998888888885
Q ss_pred cccCCChhh-hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHH-HHHhc-c--ccC--CCCEEEEcCCCCHHH
Q 002263 84 TQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM-AMCNN-I--QKG--KKKTFIIASNCHPQT 156 (946)
Q Consensus 84 t~~~pyq~e-~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~-~la~~-~--~~~--~gd~vvv~~~~Hps~ 156 (946)
...+||||+ ..||.++.+.++|++++++|||+. +||.+.+.+..|-. +|+++ + .++ .++.+||+++.|..+
T Consensus 93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 93 ANIHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 667999999 899999999999999999999998 99999888888855 55554 2 232 678999999999554
Q ss_pred HHHHHHhhcCCCeEEEEe--------ccccccc-cCCCEeEEEEEcCCCceeec-chHHHHHHHHhCCcEEEE-EecCcc
Q 002263 157 IDICITRADGFDIKVVVS--------DLKDIDY-KSGDVCGVLVQYPGTEGEVL-DYGDFIKNAHANGVKVVM-ATDLLA 225 (946)
Q Consensus 157 ~~~~~~~a~~~gi~v~~~--------~~~~l~~-i~~~t~~v~v~~pn~~G~i~-di~~i~~~a~~~gal~~v-~a~~~a 225 (946)
-+-. ...|++|+.| |++||++ ++++++++++||||+.|.++ +|.+|++++|++|++|++ ||++.+
T Consensus 171 PASA----am~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 171 PASA----AMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred hhhH----hhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhh
Confidence 4332 2357787775 4467887 88999999999999999998 899999999999999999 899999
Q ss_pred ccCCCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccccccc
Q 002263 226 LTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 304 (946)
Q Consensus 226 l~~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~a 304 (946)
+..+.+||++|+|++..+. |+|++|+|.||||.|.+.|++.+..+||++. .. .+ +.. |++....+ ..+.|-
T Consensus 247 ~vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~~-~~--~~~-y~~~~~~~-~s~g~~-- 318 (496)
T COG1003 247 IVGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-VY-HD--VGE-YRLDYDGK-KSIGVS-- 318 (496)
T ss_pred hhccccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-cc-CC--Ccc-ccccCCCC-ccceee--
Confidence 9888999999999999999 9999999999999999999999999999865 21 11 111 33332111 223332
Q ss_pred CCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CC--CCcCeEEEecC------C--H
Q 002263 305 TSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--PFFDTVKVKCA------D--A 373 (946)
Q Consensus 305 Tsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~--~~~~~~~i~~~------~--~ 373 (946)
.+++.+.+. -..+-+|+..+|++||++..+....+|+|++++|+.. +++. .. ...++++++.. + +
T Consensus 319 ~a~~Gs~~i--l~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~ 394 (496)
T COG1003 319 AAPYGSASI--LPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRA 394 (496)
T ss_pred ccccCcchH--HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcH
Confidence 123333333 3566779999999999999999999999999999873 6764 22 24678887665 3 7
Q ss_pred HHHHHHHHHcCCeee-----eecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 374 HAIASAAYKIEMNLR-----VVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 374 ~~v~~~L~~~GI~~~-----~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+|+++|.+.|+... .+..++++|.+||+.+++++|+|++++..
T Consensus 395 ~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~ 443 (496)
T COG1003 395 LDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIA 443 (496)
T ss_pred HHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHH
Confidence 899999999999754 34579999999999999999999999974
No 20
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=1.3e-38 Score=372.66 Aligned_cols=415 Identities=25% Similarity=0.364 Sum_probs=316.7
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCcccc
Q 002263 402 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 481 (946)
Q Consensus 402 ~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~ 481 (946)
-|+++|++.|++.|+.+ |+|+|+ ++||+.+|++.+. .+| ++.||.++++++.+++++|......+++
T Consensus 6 ~~~~~~~~~~~~~~~~~-----~~~~~~----~~~p~~~~~~~~~-~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 72 (447)
T PRK00451 6 PHTEEDIREMLDAIGVK-----SIDELF----ADIPEELRLKRPL-DLP---PGLSEMELLRHLRELAAKNKTAEEYPSF 72 (447)
T ss_pred CCCHHHHHHHHHHhCCC-----CHHHHH----HhCCHHHHhCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCcCcCccc
Confidence 36899999999999976 899997 4899999988875 666 4579999999999999888655445667
Q ss_pred ceeeec--CCCcccccccccCcccc-ccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccC-CchHHHHHHHHHHHH
Q 002263 482 LGSCTM--KLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIR 557 (946)
Q Consensus 482 lGs~~~--~~~~~~~~~~~~~~~f~-~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~-~sGa~ge~a~l~a~r 557 (946)
+|.+.+ ..+...... ....++. .|+|+++ +.++|.++++.++++++++++|++..++.. ++|+.+.++++++++
T Consensus 73 lg~g~~~~~~p~~~~~~-~~~~~~~~~y~~~~~-~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~ 150 (447)
T PRK00451 73 LGAGAYDHYIPAVVDHI-ISRSEFYTAYTPYQP-EISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVR 150 (447)
T ss_pred CcccccCCcCcHHHHHH-HhchhHHHhcCCCCC-ccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHH
Confidence 776443 334333332 3445664 4999999 889999999999999999999998655433 344444445544443
Q ss_pred HHHHhcCCCCCCEEEEcCCCCCCCHHHHH----HcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCccccc
Q 002263 558 AYHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVY 633 (946)
Q Consensus 558 ~y~~~~G~~~~~~Ili~~saHg~~~~~a~----~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~ 633 (946)
. .++++|++++..|+++...+. ..|++++.++++++ .+|+++|+++++ ++|++|++++||.+|.+
T Consensus 151 ~-------~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~---~~t~~v~l~~pn~tG~v 219 (447)
T PRK00451 151 I-------TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD---DDTAAVVVQYPNFFGVI 219 (447)
T ss_pred h-------cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC---CCeEEEEEECCCCCCee
Confidence 1 146789999999998887754 37999999999887 999999999996 78999999999999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccc
Q 002263 634 EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 713 (946)
Q Consensus 634 ~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~ 713 (946)
+ |+++|+++||++|++++++ ++..+++.+..|+++|+|+++++.|| |++|+.+||||+|++++++++.+.+|+..++
T Consensus 220 ~-~l~~I~~~a~~~~~~~iv~-~d~~~~g~~~~~~~~~~D~~~~s~~k-~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g 296 (447)
T PRK00451 220 E-DLEEIAEIAHAGGALFIVG-VDPVSLGLLKPPGEYGADIVVGEGQP-LGIPLSFGGPYLGFFATRKKLVRQMPGRLVG 296 (447)
T ss_pred C-CHHHHHHHHHHCCCEEEEE-cChHHhccCCCcccCCCCEEEECCCc-CCCCCCCCCCCchHHHhhHHHHhhCCCCEee
Confidence 8 7999999999999999983 23335555667889999999999876 7899999999999999999988888877666
Q ss_pred cCCCC-CC-------------CCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCC
Q 002263 714 STGGI-PA-------------PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP 779 (946)
Q Consensus 714 ~~~d~-~~-------------~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~ 779 (946)
++.+. +. ..+++++.+++++ +...+.++++++..++++|++++.++...+++++.++|+++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g 373 (447)
T PRK00451 297 ETVDADGKRGFVLTLQAREQHIRREKATSNICTN---QALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGG 373 (447)
T ss_pred eecccCCCeeeEeecccccccccccccccccccc---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 54322 11 1233455555542 2233345666788899999999999999999999999987522
Q ss_pred eeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC---CCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 780 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MSWP-VPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 780 v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~---~~~p-~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
+... .+.+++.+++++. .+..++.++|.++|+.+.. ..+| ..+.+|+++++.+|++|||+|+++|++
T Consensus 374 ~~~~--~~~~~~~~~v~~~-------~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 374 VELF--DGPFFNEFVVRLP-------KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred EEec--CCCeEEEEEEecC-------CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 2111 1345555566652 3568999999999988532 1122 347899999999999999999999987
Q ss_pred HH
Q 002263 856 IR 857 (946)
Q Consensus 856 i~ 857 (946)
++
T Consensus 445 ~~ 446 (447)
T PRK00451 445 VL 446 (447)
T ss_pred Hh
Confidence 64
No 21
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=1.2e-35 Score=342.66 Aligned_cols=375 Identities=45% Similarity=0.654 Sum_probs=301.2
Q ss_pred HHHHHHHHHHHHhcCCcce---eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC
Q 002263 38 ESQMIEHMQKLASMNKVYK---SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 114 (946)
Q Consensus 38 e~e~~~~~~~l~~~n~~~~---~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~ 114 (946)
|.||++|+.+++++|.... ..+|.|..+|..|..+.+...+. ...+.|+||.+..++|..+...++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence 5699999999999887542 57888888888999987544444 4467899999888999999999999999999999
Q ss_pred CCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCC
Q 002263 115 PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 185 (946)
Q Consensus 115 ~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~ 185 (946)
+..++.++.+++.++++++++.....++||+|++++..|+++...+....+..|++++.++. +++++ ++++
T Consensus 80 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 159 (398)
T cd00613 80 DVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE 159 (398)
T ss_pred CccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC
Confidence 87678788877766676655443332248999999999999999987665566788888765 34555 7788
Q ss_pred EeEEEEEcCCCceeecch-HHHHHHHHhCCcEEEEEecCccc-cCCCCCCCccceEEEecc-ccccccCCCCCCceEEEE
Q 002263 186 VCGVLVQYPGTEGEVLDY-GDFIKNAHANGVKVVMATDLLAL-TILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA 262 (946)
Q Consensus 186 t~~v~v~~pn~~G~i~di-~~i~~~a~~~gal~~v~a~~~al-~~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~ 262 (946)
|++|++++|+.+|.+.|+ ++|+++||++|++++++. .++. ....+++++|+|++++++ |++ .|++.|||++||++
T Consensus 160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~-~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~ 237 (398)
T cd00613 160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDG-DNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFA 237 (398)
T ss_pred eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEe-ccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEE
Confidence 999999999989999985 999999999999999953 2222 234466789999999999 666 99999999999999
Q ss_pred EchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHH
Q 002263 263 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 342 (946)
Q Consensus 263 ~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a 342 (946)
+++++.+.+++..+|+..+..+.+.|.+.+..+..+.|||++|+|+++...+.+..++..+..++.+|++++.+++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 238 VKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNA 317 (398)
T ss_pred EhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999998888875433334447776666777889999999999988877777777778889999999999999999
Q ss_pred HHHHHHHhcCCCEEEcCCCCcCeEEEecC---C--HHHHHHHHHHcCCeeeee---cCCeEEEEeccCCCHHHHHHHHHH
Q 002263 343 GTFALGLKKLGTVEVQGLPFFDTVKVKCA---D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIV 414 (946)
Q Consensus 343 ~~l~~~L~~~g~~~~~~~~~~~~~~i~~~---~--~~~v~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~~ 414 (946)
++++++|+++++..+...++...+.+.++ + +.+++++|.++||.+... ..+.+|+|++.+||++|||+++++
T Consensus 318 ~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 318 NYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred HHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 99999999986333233344445666654 3 678999999999987653 457899999999999999999987
Q ss_pred H
Q 002263 415 F 415 (946)
Q Consensus 415 l 415 (946)
|
T Consensus 398 L 398 (398)
T cd00613 398 L 398 (398)
T ss_pred C
Confidence 4
No 22
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-34 Score=329.42 Aligned_cols=362 Identities=19% Similarity=0.161 Sum_probs=280.8
Q ss_pred HHHHHHHHHHHHhcC-CcceeecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC
Q 002263 38 ESQMIEHMQKLASMN-KVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP 115 (946)
Q Consensus 38 e~e~~~~~~~l~~~n-~~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~ 115 (946)
-..+++.|+.+.+.- +.+. |+...... ++|..+.+.+.+.. .++.+.+......++...+.+.++|+.+|+++|++
T Consensus 5 ~~~~r~~fp~l~~~~~~~~v-ylD~aa~~-~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~ 82 (405)
T COG0520 5 VAAVRADFPALKREVGKPLV-YLDNAATS-QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNAD 82 (405)
T ss_pred hHHHHhhCHHHhhccCCCeE-EecCcccc-cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 345888888887653 2222 33444322 48888877766422 12333344555678888899999999999999999
Q ss_pred C-cceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cCCC
Q 002263 116 M-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGD 185 (946)
Q Consensus 116 ~-~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~~~ 185 (946)
+ .++.++.++|.++..+..++....++||+||+++.+|++++.+|+.+++..|+++++++++ +++. ++++
T Consensus 83 ~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~ 162 (405)
T COG0520 83 SSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPK 162 (405)
T ss_pred CCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCC
Confidence 5 8899999999776665554431123789999999999999999999998889999998863 3455 7889
Q ss_pred EeEEEEEc-CCCceeecchHHHHHHHHhCCcEEEE-EecCccccCC-CCCCCccceEEEecc-ccccccCCCCCCceEEE
Q 002263 186 VCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVM-ATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFL 261 (946)
Q Consensus 186 t~~v~v~~-pn~~G~i~di~~i~~~a~~~gal~~v-~a~~~al~~l-~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l 261 (946)
|++|.+++ +|.+|++.|+++|+++||++|++++| ++| +.+.+ .+..++|+|++++|+ |||++|. |+|+|
T Consensus 163 Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq--~~~h~~idv~~l~~Df~afsgHKwl~gP~-----GiGvL 235 (405)
T COG0520 163 TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQ--AAGHLPIDVQELGCDFLAFSGHKWLLGPT-----GIGVL 235 (405)
T ss_pred ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECcc--ccCccCCCchhcCCCEEEEcccccccCCC-----ceEEE
Confidence 99999997 58999999999999999999999999 445 44433 366899999999999 5575543 68999
Q ss_pred EEchhhhhcCCCceEeE-eecCCCC-cceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHH
Q 002263 262 ATSQEYKRMMPGRIVGV-SIDSSGK-PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 339 (946)
Q Consensus 262 ~~~~~~~~~lp~~~~G~-s~d~~g~-~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~ 339 (946)
|+|+++++.|+|...|+ +.+.... ..+. ..+...|+|.||+|+. +.+++.+++ .++...|+++|.++.+
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~~----~~~~p~rfe~gTpn~~---~~i~l~aAl--~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGVT----LAELPLRFEAGTPNIA---GAIGLAAAL--DYLLEIGMEAIEAHER 306 (405)
T ss_pred EEchHHHhhcCCcccCCCceeeeccccccc----ccCcchhhccCCchHH---HHHhHHHHH--HHHHHHhHHHHHHHHH
Confidence 99999999998888774 2221111 1111 2356678899999994 666777776 7778888999999999
Q ss_pred HHHHHHHHHHhcCCCEEEcCCC---CcCeEEEecCC--HHHHHHHHHHcCCeeeee------------cCCeEEEEeccC
Q 002263 340 GLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDET 402 (946)
Q Consensus 340 ~~a~~l~~~L~~~g~~~~~~~~---~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~~~~ 402 (946)
++++|+.++|+++.++++++.+ ....++|++++ +.++++.|.++||.++.- .++.+|+|++.|
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~Y 386 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLY 386 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeec
Confidence 9999999999999559998643 45678888887 899999999999988642 134599999999
Q ss_pred CCHHHHHHHHHHHhC
Q 002263 403 TTLEDVDKLFIVFAG 417 (946)
Q Consensus 403 ~t~edid~ll~~l~~ 417 (946)
||++|||+|+++|+.
T Consensus 387 Nt~edid~l~~aL~~ 401 (405)
T COG0520 387 NTEEDVDRLLEALKK 401 (405)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999974
No 23
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=2.9e-34 Score=331.10 Aligned_cols=375 Identities=44% Similarity=0.661 Sum_probs=282.0
Q ss_pred HHHHHHHHHHHHcCccCcCCccccceeeecCCCccccccccc--CccccccCCCCcccccccHHHHHHHHHHHHHHhhCC
Q 002263 458 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVT--WPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 535 (946)
Q Consensus 458 e~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~--~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~ 535 (946)
|+||+||+++++++|...+.+++.+|.|.+.++.......+. ...+..|+||.+ ..+.|..++..++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQP-EISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCCh-hhhhhHHHHHHHHHHHHHHHHCC
Confidence 579999999999999888878888888887776555433211 112234667766 66789999999999999999998
Q ss_pred C--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcC----CEEEEEcCCCCCCCCHHHHH
Q 002263 536 D--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG----MKIVSVGTDAKGNINIEELR 609 (946)
Q Consensus 536 ~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G----~~vv~v~~~~~g~~D~e~L~ 609 (946)
+ .+.+.+++|++++ +++++++. .+ +++++|+++++.|+++...+...| ++++.+++++++.+|+++|+
T Consensus 80 ~~~~v~~~~~g~~~~~-~~~~~~~~---~~--~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 153 (398)
T cd00613 80 DVANASLQDEATAAAE-AAGLAAIR---AY--HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALK 153 (398)
T ss_pred CccceeccCchHHHHH-HHHHHHHh---cc--cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHH
Confidence 7 3445555555555 33333332 22 146899999999999998888877 99999999877889999999
Q ss_pred HHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCC
Q 002263 610 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGG 689 (946)
Q Consensus 610 ~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~ 689 (946)
++++ ++|++|++++|+++|.+.+.+++|+++|+++|+++++|+++.... +..+++.+|+|++++++|||+ +|+|+
T Consensus 154 ~~i~---~~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~~~~~d~~~~s~~K~~-~p~g~ 228 (398)
T cd00613 154 EEVS---EEVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTG-VPHGG 228 (398)
T ss_pred HhcC---CCeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEecccccc-CCCChHHcCCCEEEeeccccC-CCCCC
Confidence 9996 789999999999889997335999999999999999999875333 556778899999999999999 99999
Q ss_pred CCCcceeEEEecccCCCCCCCccccCCCC----------C----CCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 690 GGPGMGPIGVKKHLAPFLPSHPVVSTGGI----------P----APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 690 GGPg~G~i~~~~~l~~~lp~~~v~~~~d~----------~----~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
|||++|++++++++.+.+++...++..+. . .+.+++.+.++.+ +....+..+++++..++.+|
T Consensus 229 Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~---~~~~~~~~a~~~l~~~~~~g 305 (398)
T cd00613 229 GGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT---GQALLALMAAMYIVYLGPEG 305 (398)
T ss_pred CCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee---cHHHHHHHHHHHHHHhCHHH
Confidence 99999999999888777765443322110 0 0012234444432 34556677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 002263 756 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 834 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lr 834 (946)
+.++.++..++++++.++|+++ ..... .+++.+.++++++.. .+.+..+++++|.++||++.....+..+.+|
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~v~~~~~~~---~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lR 379 (398)
T cd00613 306 LKEIAERAHLNANYLAKRLKEVGGVLPF---NGPFFHEFVLRLPPL---YGIRAEDLAKALIDGGFHAPTMYLPVDGTLM 379 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccC---CCCeeEEEEEEcCCc---chHHHHHHHHhhhhcCccccccccCCCCeEE
Confidence 9999999999999999999885 22211 234455556665410 0245789999999999987654322358899
Q ss_pred EEcCCCCCHHHHHHHHHHH
Q 002263 835 IEPTESESKEELDRYCDAL 853 (946)
Q Consensus 835 i~~t~~~t~~eid~~~~aL 853 (946)
++|+.++|++|||+++++|
T Consensus 380 is~~~~~t~edid~~~~~L 398 (398)
T cd00613 380 IEPTETETKEELDALLEAL 398 (398)
T ss_pred EEcCCCCCHHHHHHHHHhC
Confidence 9999999999999999875
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=1.3e-27 Score=276.46 Aligned_cols=360 Identities=16% Similarity=0.106 Sum_probs=257.4
Q ss_pred CHHHHHHHHHHHHhc----CCcceeecCCCCCCCCCcHHHHHHHHhCCcccccc--CC--ChhhhhhhHHHHHHHHHHHH
Q 002263 37 TESQMIEHMQKLASM----NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TP--YQAEIAQGRLESLLNFQTMI 108 (946)
Q Consensus 37 se~e~~~~~~~l~~~----n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~--~p--yq~e~sqg~l~~l~e~q~~l 108 (946)
+-..++.+|+.+... ...|.++-+.+ .+|..+.+.+.. |+..+ .| .....++...+.+.++++.+
T Consensus 4 ~~~~~r~~fp~~~~~~~~~~~iYld~a~~~----~~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l 76 (406)
T PRK09295 4 SVEKVRADFPVLSREVNGLPLAYLDSAASA----QKPSQVIDAEAE---FYRHGYAAVHRGIHTLSAQATEKMENVRKQA 76 (406)
T ss_pred ChHHHHhhCccccCcCCCCceEEEeCcccc----cCCHHHHHHHHH---HHHhcCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 334567777766321 12344433333 366666555542 23211 12 11224455678889999999
Q ss_pred HHHhCC-CCcceEEcccHHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------cc
Q 002263 109 ADLTGL-PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KD 178 (946)
Q Consensus 109 a~L~g~-~~~~~sl~~~~Ta~~ea~~la~~~-~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~ 178 (946)
|+++|. ++.++.+++|+|.++..++.++.. ..++||+||+++.+|+++...|+.+++..|++++.++. ++
T Consensus 77 a~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~ 156 (406)
T PRK09295 77 ALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLET 156 (406)
T ss_pred HHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHH
Confidence 999998 567899999999877766554321 11278999999999999998888877778999988764 34
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GG 255 (946)
+++ ++++|++|++++| |.+|.+.|+++|+++||++|++++||+ .++++... +..++|+|++++|++|+.+|
T Consensus 157 l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~K~~gp----- 230 (406)
T PRK09295 157 LPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDG-AQAVMHHPVDVQALDCDFYVFSGHKLYGP----- 230 (406)
T ss_pred HHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEc-ccccCccccCchhcCCCEEEeehhhccCC-----
Confidence 555 7788999999998 789999999999999999999999943 23454432 34678999999999556434
Q ss_pred CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHH
Q 002263 256 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 335 (946)
Q Consensus 256 P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 335 (946)
+|+|++++++++.+.+|+...|++.......... ...++...|+|.||+|+ .+++++.+++ .++...|++++.
T Consensus 231 ~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~r~e~GT~~~---~~~~~l~~al--~~~~~~g~~~i~ 303 (406)
T PRK09295 231 TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEG--TTWAKAPWRFEAGTPNT---GGIIGLGAAL--DYVSALGLNNIA 303 (406)
T ss_pred CCcEEEEEchHhHhhCCCcccCCceeeeeecCCc--cccCCchhhcCCCCccH---HHHHHHHHHH--HHHHHhCHHHHH
Confidence 4589999999998888876655322100000000 11123445788999998 4566676666 566667899999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecCC--HHHHHHHHHHcCCeeeee------------cCCeEEEEec
Q 002263 336 QRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFD 400 (946)
Q Consensus 336 ~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~~ 400 (946)
+++.+++++++++|+++++++++++ .....++|.+++ +.++.+.|.++||.++.- .++.+|+|++
T Consensus 304 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~ 383 (406)
T PRK09295 304 EYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA 383 (406)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEcc
Confidence 9999999999999999844988753 234567777765 788999999999988531 1367999999
Q ss_pred cCCCHHHHHHHHHHHh
Q 002263 401 ETTTLEDVDKLFIVFA 416 (946)
Q Consensus 401 ~~~t~edid~ll~~l~ 416 (946)
.+||++|||+|+++|.
T Consensus 384 ~ynt~~did~l~~~l~ 399 (406)
T PRK09295 384 MYNTHEEVDRLVAGLQ 399 (406)
T ss_pred CCCCHHHHHHHHHHHH
Confidence 9999999999999996
No 25
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=1.4e-27 Score=272.96 Aligned_cols=326 Identities=21% Similarity=0.202 Sum_probs=243.9
Q ss_pred CCcHHHHHHHHhCCcccccc--CC--ChhhhhhhHHHHHHHHHHHHHHHhCCCC-cceEEcccHHHHHHHHHHHhccccC
Q 002263 67 HVPPVILRNIMENPAWYTQY--TP--YQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQKG 141 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~~--~p--yq~e~sqg~l~~l~e~q~~la~L~g~~~-~~~sl~~~~Ta~~ea~~la~~~~~~ 141 (946)
.+|..+.+.+... +..+ .| .....++...+.+.++++.+++++|+++ .++.+..++|.+++.++.++....+
T Consensus 10 ~~p~~v~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~ 86 (371)
T PF00266_consen 10 PMPKSVLEAISDY---LRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLK 86 (371)
T ss_dssp B-BHHHHHHHHHH---HHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGT
T ss_pred CCCHHHHHHHHHH---HHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccc
Confidence 5888887776642 2111 22 1222456678899999999999999998 8888999999888888777632123
Q ss_pred CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHH
Q 002263 142 KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAH 211 (946)
Q Consensus 142 ~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~ 211 (946)
+|++|+++..+|+++..+|...++..|+++++++. +++++ +++++++|++++. +.+|.+.|+++|+++||
T Consensus 87 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~ 166 (371)
T PF00266_consen 87 PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAH 166 (371)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhh
Confidence 88999999999999999998888788999998765 34555 7789999999986 78999999999999999
Q ss_pred hCCcEEEEEecCccccCC-CCCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEe-ecCCCCcceE
Q 002263 212 ANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS-IDSSGKPALR 289 (946)
Q Consensus 212 ~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s-~d~~g~~~~~ 289 (946)
++|++++||+ .++++.+ .+..++|+|++++|+|||++ +||+|++++++++.+++.+...|+. .+. ..
T Consensus 167 ~~~~~~~vD~-~~~~g~~~id~~~~~~D~~~~s~~Kl~g-----p~G~g~l~v~~~~~~~~~p~~~~~~~~~~-----~~ 235 (371)
T PF00266_consen 167 EYGALLVVDA-AQSAGCVPIDLDELGADFLVFSSHKLGG-----PPGLGFLYVRPEAIERLRPAKPGGGYLDF-----PS 235 (371)
T ss_dssp HTTSEEEEE--TTTTTTSS--TTTTTESEEEEESTSTTS-----SSTEEEEEEEHHHHHHHHTSSSSSSTTTH-----HH
T ss_pred ccCCceeEec-hhccccccccccccccceeeecccccCC-----CCchhhheehhhhhhcccccccccccccc-----cc
Confidence 9999999943 3456554 35678999999999955854 4679999999999888866555532 110 00
Q ss_pred Ee-cccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC----CCcC
Q 002263 290 VA-MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFD 364 (946)
Q Consensus 290 l~-l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~----~~~~ 364 (946)
+. ........|++.||.|+. .++++..++ .++...|++++.+|+.++++++++.|++++++++++. ....
T Consensus 236 ~~~~~~~~~~~~~~~GT~~~~---~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 310 (371)
T PF00266_consen 236 LQEYGLADDARRFEGGTPNVP---AIYALNEAL--KLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPS 310 (371)
T ss_dssp HHHHCHHSTTTGSSSSS--HH---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTT
T ss_pred chhcccccccccccccceeee---hhhhHHHHH--hhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccc
Confidence 00 001234456678899984 555666665 5666789999999999999999999999976888652 2234
Q ss_pred eEEEecCC--HHHHHHHHHHcCCeeeee------------cCCeEEEEeccCCCHHHHHHH
Q 002263 365 TVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLEDVDKL 411 (946)
Q Consensus 365 ~~~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~~~~~t~edid~l 411 (946)
.++|.+++ +.++.+.|.++||.++.- ..+.||+|++.+||++|||+|
T Consensus 311 i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 311 IVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 67777766 889999999999988651 138999999999999999986
No 26
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=1.7e-26 Score=266.72 Aligned_cols=361 Identities=16% Similarity=0.098 Sum_probs=256.8
Q ss_pred CCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC
Q 002263 36 LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 114 (946)
Q Consensus 36 ~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~ 114 (946)
+.-.+++++|..+. .+..|.+.-+.| .+|..+.+.+.... .++...+.......+...+.+.++++.+|+++|+
T Consensus 4 ~~~~~~r~~fp~l~-~~~~yld~a~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~ 78 (401)
T PRK10874 4 FNPAQFRAQFPALQ-DAGVYLDSAATA----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNA 78 (401)
T ss_pred CCHHHHHHhCCCcC-CceEEEeCCccc----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44566777777652 234444433443 35655554443211 1111111122224566778899999999999999
Q ss_pred -CCcceEEcccHHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cC
Q 002263 115 -PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS 183 (946)
Q Consensus 115 -~~~~~sl~~~~Ta~~ea~~la~~~-~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~ 183 (946)
++.++.+++|+|.++..++.++.. ..++||+||+++.+|++++..|+.+++..|++++.++. +++++ ++
T Consensus 79 ~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 158 (401)
T PRK10874 79 PDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT 158 (401)
T ss_pred CCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC
Confidence 677899999999888877665521 11378999999999999988888777788999988765 34555 77
Q ss_pred CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEEeccccccccCCCCCCceEEE
Q 002263 184 GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFL 261 (946)
Q Consensus 184 ~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l 261 (946)
++|++|++++| |.+|.+.|+++|+++||++|++++||+ ..+++.. .+..++++|++++|++|+.+| ||+|++
T Consensus 159 ~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l 232 (401)
T PRK10874 159 PRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDG-AQGAVHFPADVQALDIDFYAFSGHKLYGP-----TGIGVL 232 (401)
T ss_pred cCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEC-CcccccccCCchhcCCCEEEEecccccCC-----CccEEE
Confidence 89999999987 679999999999999999999999943 2344333 234678999999998445333 468999
Q ss_pred EEchhhhhcCCCceEeEe-ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHH
Q 002263 262 ATSQEYKRMMPGRIVGVS-IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHG 340 (946)
Q Consensus 262 ~~~~~~~~~lp~~~~G~s-~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~ 340 (946)
++++++.+.+++...|.. .+. ..+. .+..++.+.|+|.||+|+ ....++.+++ .++...|++++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~e~Gt~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~ 303 (401)
T PRK10874 233 YGKSELLEAMSPWQGGGKMLTE---VSFD-GFTPQSAPWRFEAGTPNV---AGVIGLSAAL--EWLADIDINQAESWSRS 303 (401)
T ss_pred EEchHHHhcCCCeecCCcceEe---eccC-ccCCCCChhhccCCCcCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHH
Confidence 999999988876543321 010 0010 111223445678899998 4566666666 56667788889999999
Q ss_pred HHHHHHHHHhcC-CCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeeec------------CCeEEEEeccCCCH
Q 002263 341 LAGTFALGLKKL-GTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDETTTL 405 (946)
Q Consensus 341 ~a~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~------------~~~lris~~~~~t~ 405 (946)
++++++++|+++ | ++++..+....+.|.+++ +.++.+.|.++||.++.-. .+.+|+|++.+||+
T Consensus 304 l~~~l~~~l~~~~g-~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~ 382 (401)
T PRK10874 304 LATLAEDALAKLPG-FRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQ 382 (401)
T ss_pred HHHHHHHHHhcCCC-EEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCH
Confidence 999999999998 6 888754333456666665 7889999999999875411 47899999999999
Q ss_pred HHHHHHHHHHhC
Q 002263 406 EDVDKLFIVFAG 417 (946)
Q Consensus 406 edid~ll~~l~~ 417 (946)
+|+++++++|..
T Consensus 383 edid~ll~al~~ 394 (401)
T PRK10874 383 SDVDALVNAVDR 394 (401)
T ss_pred HHHHHHHHHHHH
Confidence 999999999963
No 27
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=1.6e-26 Score=253.14 Aligned_cols=290 Identities=17% Similarity=0.173 Sum_probs=225.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHH--hcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 96 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC--NNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la--~~~-~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
-..+++.++++.+|+++|+++.++.+++|||.+...++.. ... +++++++||++..+||+++..++.+ +.+|++|.
T Consensus 41 ~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vt 119 (386)
T COG1104 41 EARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEE
Confidence 4568999999999999999999999999999444433332 111 1236889999999999999999887 67899999
Q ss_pred Eecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEE
Q 002263 173 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 241 (946)
Q Consensus 173 ~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v 241 (946)
++++ ++|++ ++++|.+|.|++. |.+|+++||++|+++|+++|++++||+ ..++|.++ ++.++|+|++.
T Consensus 120 yl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDA-vQa~Gkipi~~~~~~vD~ls 198 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDA-VQAVGKIPIDLEELGVDLLS 198 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEeh-hhhcCceeccccccCcceEE
Confidence 9876 46777 8999999999987 679999999999999999999999954 34777664 56788999999
Q ss_pred eccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 242 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 242 ~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
.|+|+|++|. |.|++|+++.. ++.+.+.|. .+ |.. +-.||.|+ .++.|+..|+
T Consensus 199 ~SaHK~~Gpk-----GiGaLyv~~~~--~~~p~i~GG------gQ---------E~g--~RsGTenv---~~Ivg~~~A~ 251 (386)
T COG1104 199 FSAHKFGGPK-----GIGALYVRPGV--RLEPLIHGG------GQ---------ERG--LRSGTENV---PGIVGFGKAA 251 (386)
T ss_pred eehhhccCCC-----ceEEEEECCCC--ccCceeccC------cC---------CCC--CCCCCccH---HHHHHHHHHH
Confidence 9999997665 48899997654 255666662 21 111 22699999 4555555554
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC--C-CcCeEEEecCC--HHHHHHHHHHcCCeeee------
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--P-FFDTVKVKCAD--AHAIASAAYKIEMNLRV------ 389 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~--~-~~~~~~i~~~~--~~~v~~~L~~~GI~~~~------ 389 (946)
.+..+.++....++..+-++|.++|.+. +.+.+.+. + ..+.+.|.+++ ++.+.-.|..+||.++.
T Consensus 252 ---~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS 328 (386)
T COG1104 252 ---EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSS 328 (386)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccC
Confidence 3345567778888889999999999976 43666543 2 24577788887 88899999999998742
Q ss_pred -------------e----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 -------------V----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 -------------~----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. -.+.||+|++.+||++|+++++++|..
T Consensus 329 ~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 329 GSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred CCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 137899999999999999999999974
No 28
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=1.8e-26 Score=266.17 Aligned_cols=357 Identities=17% Similarity=0.101 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC-cccc--ccCCChhhhhhhHHHHHHHHHHHHHHHhCCC
Q 002263 39 SQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYT--QYTPYQAEIAQGRLESLLNFQTMIADLTGLP 115 (946)
Q Consensus 39 ~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t--~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~ 115 (946)
.+++++|..+. ++..|.+.-+.| .+|..+.+.+.+.. .++. .+.++ ...+...+.+.++++.+|+++|++
T Consensus 4 ~~~r~~fp~l~-~~~iyld~a~~~----~~p~~v~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~la~~~g~~ 76 (398)
T TIGR03392 4 AQFRQQFPALQ-DGTVYLDSAATA----LKPQAVIDATQQFYRLSSGTVHRSQH--QQAQSLTARYELARQQVARFLNAP 76 (398)
T ss_pred hHHHHhCCccC-CCeEEeeCcccc----CCCHHHHHHHHHHHHhcCCCCCCccc--HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44666666542 233444433333 36666655554311 1111 11122 234445677889999999999995
Q ss_pred -CcceEEcccHHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC
Q 002263 116 -MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG 184 (946)
Q Consensus 116 -~~~~sl~~~~Ta~~ea~~la~~~-~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~ 184 (946)
+.++.+++|+|.++..++.++.. ..++||+||+++.+|+++...+...++..|++++.++. +++++ +++
T Consensus 77 ~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~ 156 (398)
T TIGR03392 77 DAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP 156 (398)
T ss_pred CCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc
Confidence 67898999999887776665521 01378999999999999888887777788999998765 23445 678
Q ss_pred CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEEeccccccccCCCCCCceEEEE
Q 002263 185 DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLA 262 (946)
Q Consensus 185 ~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~ 262 (946)
+|++|++++| |.+|.+.|+++|+++||++|+++++|+ ..+++.. .+..++++|++++|++|+.+| +|+|+++
T Consensus 157 ~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l~ 230 (398)
T TIGR03392 157 RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDG-AQGVVHGPPDVQALDIDFYAFSGHKLYGP-----TGIGVLY 230 (398)
T ss_pred CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCCCCChhhcCCCEEEEecccccCC-----CceEEEE
Confidence 8999999987 689999999999999999999999943 2343333 233568999999999445333 4589999
Q ss_pred EchhhhhcCCCceEeEee-cCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHH
Q 002263 263 TSQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGL 341 (946)
Q Consensus 263 ~~~~~~~~lp~~~~G~s~-d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~ 341 (946)
+++++++.+++...|... +... + .....++.+.|+|.||+|+ ....++.+++ .++...|++++.+++.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~e~GT~~~---~~~~a~~~al--~~l~~~g~~~i~~~~~~l 301 (398)
T TIGR03392 231 GKTELLEAMPPWQGGGKMLSHVS---F-DGFIPQAVPHRFEAGTPNI---AGVIGLSAAL--EWLTDIDIAAAEAWSVSL 301 (398)
T ss_pred EcHHHHhhCCCeecCCceEeecc---c-cccccCCChhhccCCCCCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHH
Confidence 999998888765433211 1000 0 0111234455778899998 4566666666 556667888999999999
Q ss_pred HHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeee------------cCCeEEEEeccCCCHHH
Q 002263 342 AGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLED 407 (946)
Q Consensus 342 a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~~~~~t~ed 407 (946)
++++++.|+++.++++...+....++|.+++ +.++.++|.++||.++.- .++.||+|++.+||++|
T Consensus 302 ~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~e 381 (398)
T TIGR03392 302 ADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQD 381 (398)
T ss_pred HHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHH
Confidence 9999999999833888754333456666655 788999999999988631 14689999999999999
Q ss_pred HHHHHHHHhC
Q 002263 408 VDKLFIVFAG 417 (946)
Q Consensus 408 id~ll~~l~~ 417 (946)
+++++++|+.
T Consensus 382 i~~l~~~l~~ 391 (398)
T TIGR03392 382 VDALVDAVGA 391 (398)
T ss_pred HHHHHHHHHH
Confidence 9999999963
No 29
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.6e-26 Score=268.74 Aligned_cols=310 Identities=17% Similarity=0.124 Sum_probs=234.4
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 94 AQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 94 sqg~l~~l~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~la~~~-~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
+.-..+.+.++++.+++++|++ +.++.++.|+|.++..++.++.. ..++|++|+++..+||++...|+.+++..|+++
T Consensus 71 ~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 71 SAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 3445567889999999999996 46899999999877766544311 112789999999999999999988777889999
Q ss_pred EEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEE
Q 002263 172 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIV 240 (946)
Q Consensus 172 ~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~ 240 (946)
+.+++ +++++ ++++|++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.+.. .+..++|+|++
T Consensus 151 ~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-a~~~g~~~~~~~~~~~d~~ 229 (424)
T PLN02855 151 KFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDA-CQSVPHMPVDVQTLGADFL 229 (424)
T ss_pred EEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCcCCCchhcCCCEE
Confidence 88765 23555 7788999999997 679999999999999999999999942 2244433 24567899999
Q ss_pred EeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 241 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 241 v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
++|++|+.+| +|+|++++++++++++++...|++... .. |......++.+.|++.||+|+ ..++++.++
T Consensus 230 ~~s~~K~~gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~--~~-~~~~~~~~~~~~r~e~GT~~~---~~~~~l~~a 298 (424)
T PLN02855 230 VASSHKMCGP-----TGIGFLWGKSDLLESMPPFLGGGEMIS--DV-FLDHSTYAPPPSRFEAGTPAI---GEAIGLGAA 298 (424)
T ss_pred EeecccccCC-----CccEEEEEchhhhhcCCCEecCCCcee--ee-ecCccccCCChhhccCCChHH---HHHHHHHHH
Confidence 9999556433 468999999999999988766643110 00 100000123345778999998 455566666
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC------CCcCeEEEecCC--HHHHHHHHHHc-CCeeeee-
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL------PFFDTVKVKCAD--AHAIASAAYKI-EMNLRVV- 390 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~------~~~~~~~i~~~~--~~~v~~~L~~~-GI~~~~~- 390 (946)
+ .++...|++++.+++.++++++++.|+++.+++++++ .....++|.+++ +.++.+.|.++ ||.++.-
T Consensus 299 l--~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~ 376 (424)
T PLN02855 299 I--DYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGH 376 (424)
T ss_pred H--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechh
Confidence 5 6666679999999999999999999999833998842 123467777765 78899999887 9987631
Q ss_pred -----------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -----------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -----------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++.+|+|++.+||++|+++++++|..
T Consensus 377 ~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 377 HCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 136799999999999999999999974
No 30
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=3.2e-26 Score=261.60 Aligned_cols=359 Identities=18% Similarity=0.240 Sum_probs=244.8
Q ss_pred CCCHHHHHHHHHHHHcCccCcCCcccccee-eecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhh
Q 002263 455 YHTEHELLRYIHLLQSKELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 533 (946)
Q Consensus 455 ~~se~e~~r~~~~l~~~~~~~~~~~~~lGs-~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~ 533 (946)
+++|+||+++|++++++|+++.+ | ||+ +|+..+...+... ++...++..+ ...++..+++.++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~a~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 72 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYER--I-LSSMCTEPHPIARKAHE----MFLETNLGDP-GLFPGTAKLEEEAVEMLGELL 72 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHH--e-eeeeecCchHHHHHHHH----HHHhcCCCCc-ccCccHHHHHHHHHHHHHHHh
Confidence 37999999999999999998874 4 887 7765554444332 1211111111 123567788889999999999
Q ss_pred CCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHH
Q 002263 534 GFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAA 612 (946)
Q Consensus 534 G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i 612 (946)
|++.. .+..++|+.++..++.+++. .+.+++++|++++..|.+....+...|++++.+|.++++.+|+++|++++
T Consensus 73 g~~~~~~~~~~ggt~a~~~a~~~~~~----~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 148 (371)
T PRK13520 73 HLPDAYGYITSGGTEANIQAVRAARN----LAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLI 148 (371)
T ss_pred CCCCCCeEEecCcHHHHHHHHHHHHh----hccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHH
Confidence 98753 34455666555433333332 11124578999999898887778889999999999888999999999999
Q ss_pred HhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccC------CCccCCCEEEeCCCccccc
Q 002263 613 EANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS------PGYIGADVCHLNLHKTFCI 685 (946)
Q Consensus 613 ~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~------pg~~GaDi~~~s~hK~f~~ 685 (946)
+ +++++|+++++ |.+|.+. |+++|+++||++|++++||+++......+.. -...|+|.+.++.||+...
T Consensus 149 ~---~~~~~vi~~~~~~~tG~~~-~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a 224 (371)
T PRK13520 149 D---DNTIGIVGIAGTTELGQVD-PIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA 224 (371)
T ss_pred h---hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc
Confidence 7 67777777776 4689998 7999999999999999999987422211111 1135889999999997532
Q ss_pred CCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH
Q 002263 686 PHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 764 (946)
Q Consensus 686 P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~ 764 (946)
| .+.|.+++ ++++.+.+....-... +. ...... .+ + ++..++.+++.+..++.+|+.+..++..
T Consensus 225 ~-----~~~G~~~~~~~~~~~~l~~~~~~~~---~~--~~~~~~--gt-~--~~~~~~~~~~al~~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 225 P-----IPAGGILFRDESYLDALAVDTPYLT---SK--KQATLT--GT-R--SGAGVAATYAVMKYLGREGYRKVVERCM 289 (371)
T ss_pred c-----CCceEEEEcCHHHHHhhcccCcccc---CC--CCcceE--ee-c--cChHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence 2 24444554 4445444321000000 00 000000 11 1 1223456778888889999998889999
Q ss_pred HHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCH
Q 002263 765 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 843 (946)
Q Consensus 765 ~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~ 843 (946)
.+++++.++|++. +++.+. +..+.+.++++ +..++.++|.++||.+..... ++.+|++++..+|+
T Consensus 290 ~~~~~l~~~L~~~g~~~~~~----~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~ 355 (371)
T PRK13520 290 ENTRWLAEELKERGFEPVIE----PVLNIVAFDDP--------NPDEVREKLRERGWRVSVTRC--PEALRIVCMPHVTR 355 (371)
T ss_pred HHHHHHHHHHHhCCCEEecC----CCceEEEEecC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCH
Confidence 9999999999875 443222 12233445442 468999999999998765432 46899999888999
Q ss_pred HHHHHHHHHHHHHHH
Q 002263 844 EELDRYCDALISIRE 858 (946)
Q Consensus 844 ~eid~~~~aL~~i~~ 858 (946)
+|||+|+++|+++++
T Consensus 356 edi~~~~~~l~~~~~ 370 (371)
T PRK13520 356 EHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988753
No 31
>PLN03032 serine decarboxylase; Provisional
Probab=99.95 E-value=6.8e-26 Score=254.96 Aligned_cols=297 Identities=17% Similarity=0.218 Sum_probs=214.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCCccc---ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFS---LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~---l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
..+.+++.++.+|+++++|++... +++++|+.++..++.+.|.+ .++.+|+++..+|.+..+++.++|+++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~------~~~~~vi~s~~~H~Sv~kaa~~lg~~~ 135 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMEA 135 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh------CCCcEEEeCCCceeHHHHHHHHcCCCC
Confidence 467899999999999999997532 55566665554444333321 123578999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcC-----CEEEEeccccccccccc-
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG-----GQVYMDGANMNAQVGLT- 665 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g-----~ll~vD~a~~~a~~gl~- 665 (946)
+.||++++|.+|+++|+++|++...++.+|+++..| .+|.++ ||++|+++|+++| +|+|||+|+..+...+.
T Consensus 136 ~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id-pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~ 214 (374)
T PLN03032 136 VKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD-DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS 214 (374)
T ss_pred eEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC-CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC
Confidence 999999999999999999998533368888888886 589999 7999999999997 48999998643332221
Q ss_pred -C---CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 666 -S---PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 666 -~---pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
. ....++|.+++|.||+++.|. |.|++++++.+...+... .+|.. .... .+..+. ++..+
T Consensus 215 ~~~~~~~~~~vDSis~s~HK~~g~P~-----g~G~ll~r~~~~~~~~~~-----~~Yl~--~~d~--ti~gSR--~g~~~ 278 (374)
T PLN03032 215 RAPEVTFRKPIGSVSVSGHKFLGCPM-----PCGVALTRKKHVKALSQN-----VEYLN--SRDA--TIMGSR--NGHAP 278 (374)
T ss_pred CCcccCCCcCCcEEEECcccccCCCc-----CeEEEEEEchhhHhhccC-----CcccC--CCCC--cccCCC--chHHH
Confidence 1 123479999999999876664 456888887655443211 11100 0001 122222 23456
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
+..|+.|+.+|.+|+++.+++++++|+|+.++|++. +.+.. . |....++|..+ ..+. ..+||
T Consensus 279 l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~-~---p~~~~V~f~~~--------~~~~-----~~~~w 341 (374)
T PLN03032 279 LYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL-N---ELSSTVVFERP--------MDEA-----FIKKW 341 (374)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-C---CCceEEEEcCC--------CcHh-----Hhhee
Confidence 788999999999999999999999999999999885 55432 2 33333444422 1111 22689
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
++.+. .+.++++++...+++.+|+|+++|+++
T Consensus 342 ~l~~~----~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 342 QLACE----GDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred eeccc----CCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 87654 368999999999999999999999764
No 32
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.95 E-value=1.8e-25 Score=256.72 Aligned_cols=382 Identities=14% Similarity=0.114 Sum_probs=257.6
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 527 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~ 527 (946)
++| +++++.+|+++.+...--.|... ...++|+||....+....... .+.+-+...| ..+....+++.++++
T Consensus 16 ~~p--~~~~~~~~~~~~~~~~iyld~~a--~~~~~~~~tt~~~p~~~~~~~---~~l~~~~~np-~s~~~~~~le~~~~~ 87 (431)
T TIGR01788 16 RMP--EEEMPPDAAYQLIHDELSLDGNP--RLNLATFVTTWMEPEARKLMD---ETINKNMIDK-DEYPQTAEIENRCVN 87 (431)
T ss_pred cCC--CCCCCHHHHHHHHHHHhhhcCCc--ceeeeeeeCCCCCHHHHHHHH---HHHhcCCCCc-ccCccHHHHHHHHHH
Confidence 456 67899999999999765444432 345678887665443322211 1111111222 223445589999999
Q ss_pred HHHHhhCCC-c--cc-cc-CCchHHHHHHHHHHHHHHHHh----cCC-CCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC
Q 002263 528 WLCTITGFD-S--FS-LQ-PNAGAAGEYAGLMVIRAYHKA----RGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 597 (946)
Q Consensus 528 ~la~l~G~~-~--~~-l~-~~sGa~ge~a~l~a~r~y~~~----~G~-~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~ 597 (946)
|+++++|++ . .. +. +++|+.++..++.++|..... .|. ..+..|+++..+|.+..+++.++|++++.||+
T Consensus 88 ~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~ 167 (431)
T TIGR01788 88 MLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPM 167 (431)
T ss_pred HHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEec
Confidence 999999998 2 22 22 455565554444444421111 121 12347999999999999999999999999999
Q ss_pred CCC-CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc------CCEEEEecccccccccccC---
Q 002263 598 DAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGLTS--- 666 (946)
Q Consensus 598 ~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~------g~ll~vD~a~~~a~~gl~~--- 666 (946)
+++ +.+|+++|+++|+ ++|.+|+++..| .+|.++ ||++|+++|+++ |+++|||+|+...+..+..
T Consensus 168 d~~~~~vd~~~L~~~i~---~~t~lV~~t~g~t~tG~id-pi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~ 243 (431)
T TIGR01788 168 DPGRYVIDPEQVVEAVD---ENTIGVVCILGTTYTGEYE-DVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDL 243 (431)
T ss_pred CCCceeeCHHHHHHHHh---hCCeEEEEEeCCCCCcccC-CHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCc
Confidence 886 5899999999997 789999999986 589999 799999999999 9999999987522211111
Q ss_pred C---CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCCCCccccCCCC-CCCCCCCCCCCcccCccchhhH
Q 002263 667 P---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHPVVSTGGI-PAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 667 p---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp~~~v~~~~d~-~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
+ ...++|.+++|.||++..| .|+|+++++++ +.+.+... .+| +..... ..+..+. .+..
T Consensus 244 ~~~~~~~~~DSis~s~HK~~~~P-----~g~G~l~~r~~~~l~~~~~~~-----~~yl~~~~~~---~t~~~sR--~g~~ 308 (431)
T TIGR01788 244 EWDFRLPRVKSINVSGHKYGLVY-----PGVGWVIWRDEEALPEELIFH-----VNYLGGDEPT---FTLNFSR--PANQ 308 (431)
T ss_pred hhhcCCCCceEEEECchhccCCC-----CCcEEEEEeChHHcchhheec-----ccccCCCCCC---cceecCc--hHHH
Confidence 1 2358899999999986333 46789999864 33322100 111 100000 1111111 1223
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
++..|..|..+|.+|++++.++++++++++.++|++. +++..++ +..+.++|+.++.. ..+.+..++.++|.++
T Consensus 309 al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~---~~~~iV~Fr~~~~~-~~~~~~~~l~~~L~~~ 384 (431)
T TIGR01788 309 VIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG---SGIPLVAFKLKDDA-DPGYTLYDLSHRLRER 384 (431)
T ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC---CCceEEEEEeCCCC-CCCcCHHHHHHHHHHC
Confidence 4468999999999999999999999999999999875 5554221 23455666654211 1135678999999999
Q ss_pred CcccCCCCCC--CC--CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMSWP--VP--GTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 819 Gi~~~~~~~p--~~--~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
||.+.....| +. -.+|+++....+++.+|+|+++|++++.++
T Consensus 385 G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 385 GWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 9986543333 22 358999988899999999999999987764
No 33
>PLN02263 serine decarboxylase
Probab=99.95 E-value=6.5e-26 Score=258.11 Aligned_cols=300 Identities=17% Similarity=0.228 Sum_probs=219.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+..+++.++.+|+++++|++. ..+.+++|+++++.++++.|.+. ++..+++|+.+|.+..+++.++|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~------~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc------CCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 688999999999999999974 24556777777766666666431 234788999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCc-ccccccCHHHHHHHHHHcCC-----EEEEeccccccccccc--
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGG-----QVYMDGANMNAQVGLT-- 665 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~-----ll~vD~a~~~a~~gl~-- 665 (946)
.||++++|++|+++|+++|++...++.+|+++.++| +|.+| ||++|+++|+++|+ |+|||||.......+.
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiD-pi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~ 282 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVD-DLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR 282 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCC-CHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc
Confidence 999999999999999999986444567788888874 89999 89999999999997 9999997421111121
Q ss_pred CC---CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHH
Q 002263 666 SP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 666 ~p---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
.| +..++|.++.|.|||+..|+++| ++.+++.....+... .+|... .+ ..+..+. ++..++
T Consensus 283 ~~~~df~~~vDSIsvD~HK~l~~P~~cg-----vll~R~~~~~~~~~~-----~~Yl~~-~d---~ti~gSR--~g~~al 346 (470)
T PLN02263 283 APKVTFKKPIGSVSVSGHKFVGCPMPCG-----VQITRMEHINVLSSN-----VEYLAS-RD---ATIMGSR--NGHAPI 346 (470)
T ss_pred ccccCCCcCccEEEECCccccCCCcCEE-----EEEEehhhHhhhccC-----hHhhCC-CC---CCcCCCC--CcHHHH
Confidence 11 12349999999999999887764 788886544332211 111000 01 1122222 123456
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
..|+.|+.+|.+|+++..++++.+|+|+.++|++. +.++. . |....++|..+ . .+ +..+||+
T Consensus 347 ~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~-~---p~s~~V~f~~p--------~-~~----~~~~gW~ 409 (470)
T PLN02263 347 FLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAML-N---ELSSTVVFERP--------K-DE----EFVRRWQ 409 (470)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-C---CCceEEEEecC--------c-hH----HhhcceE
Confidence 78999999999999999999999999999999886 44432 1 33444555432 1 11 2357998
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 822 ~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+.+. ++.++++++...+++.+|+|+++|++.....
T Consensus 410 L~~~----~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 410 LACQ----GNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred EccC----CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 7654 3569999999889999999999999887654
No 34
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=6.8e-26 Score=257.86 Aligned_cols=315 Identities=20% Similarity=0.241 Sum_probs=227.1
Q ss_pred cccHHHHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCG 589 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G 589 (946)
++-..+.+++.++.+++++|.+. ..+..+.|++ + +..+..+.|... ..++|+||++...|.+|... ++..|
T Consensus 61 ~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT-~-aln~va~~l~~~--~~~gdeIv~s~~EH~sn~~pw~~~~~~~G 136 (405)
T COG0520 61 AEEATDLYEAAREAVARFLNADSSDEIVFTRGTT-E-ALNLVARGLGRS--LKPGDEIVVSDLEHHSNIVPWQELAKRTG 136 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChh-H-HHHHHHHHhhhh--hcCCCEEEEccCcchhhHHHHHHHHHhcC
Confidence 34455688899999999999884 4433333332 1 333334444211 23569999999999999875 55679
Q ss_pred CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC
Q 002263 590 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 590 ~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg 668 (946)
++++++|++++|.+|+++++++++ ++|++|.+++- |.+|++. |+++|+++||++|++++||+||..+... ....
T Consensus 137 a~v~~i~~~~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~-pv~~I~~la~~~ga~v~VDaaq~~~h~~-idv~ 211 (405)
T COG0520 137 AKVRVIPLDDDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVN-PVKEIAELAHEHGALVLVDAAQAAGHLP-IDVQ 211 (405)
T ss_pred cEEEEEecCCCCCcCHHHHHHhcC---CCceEEEEECccccccccc-hHHHHHHHHHHcCCEEEEECccccCccC-CCch
Confidence 999999999899999999999886 89999999997 5799999 7999999999999999999998644432 3456
Q ss_pred ccCCCEEEeCCCcccccCCCCCCC-cceeEEEecccCCCCCCCccccC-CCC-----------CCCCCCCCCCCcccCcc
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVST-GGI-----------PAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lp~~~v~~~-~d~-----------~~~~~~~~~~~i~~~~~ 735 (946)
++|+|++++|.||||+ || |+|++++++++.+.++....|.. .+. ..+..+.+|.++..
T Consensus 212 ~l~~Df~afsgHKwl~------gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~--- 282 (405)
T COG0520 212 ELGCDFLAFSGHKWLL------GPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAG--- 282 (405)
T ss_pred hcCCCEEEEccccccc------CCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHH---
Confidence 7899999999999983 56 89999999988887743333321 110 01112444555432
Q ss_pred chhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHH
Q 002263 736 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
...+..|..|+. ..|+.++.++...+++|+.++|+++..+..-++.. .....+.|.+. ++...++++.
T Consensus 283 --~i~l~aAl~~~~---~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~------~~~~~dv~~~ 351 (405)
T COG0520 283 --AIGLAAALDYLL---EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK------GIHPHDVATL 351 (405)
T ss_pred --HHhHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC------CCCHHHHHHH
Confidence 222334444444 45567777888899999999999875443323321 12233455554 6789999999
Q ss_pred HHHCCcccCCCCC---C------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 815 LMDYGFHGPTMSW---P------VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 815 L~~~Gi~~~~~~~---p------~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
|.++||.++...+ | +.+++|+|+..++|++|||+|+++|+++.+
T Consensus 352 L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 352 LDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 9999988654322 2 245699999999999999999999998754
No 35
>PRK02769 histidine decarboxylase; Provisional
Probab=99.95 E-value=4.3e-25 Score=250.41 Aligned_cols=299 Identities=16% Similarity=0.177 Sum_probs=217.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcc---cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~---~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
..+.+++.++.+++++++|++.. .+++++|++++. +++..++.. .++++|+++..+|.++.+++.++|+++
T Consensus 61 ~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~---~a~~~ar~~---~~~~~ii~s~~~H~Sv~ka~~~lg~~~ 134 (380)
T PRK02769 61 LNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNL---YGCYLAREL---FPDGTLYYSKDTHYSVSKIARLLRIKS 134 (380)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHH---HHHHHHHHh---CCCcEEEeCCCceehHHHHHHHcCCCC
Confidence 35778999999999999999742 244555665554 444333221 135689999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcC---CEEEEecccccccccccC--
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG---GQVYMDGANMNAQVGLTS-- 666 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g---~ll~vD~a~~~a~~gl~~-- 666 (946)
+.|+++++|.+|+++|+++|++.+.+|++|+++.+| .+|.++ |+++|+++|+++| +++|||+|+......+..
T Consensus 135 ~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~id-pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 135 RVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAID-NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred ceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCCceEEEEEecccceeecccCcc
Confidence 999999899999999999998544459999999996 589999 7999999999998 699999986433222111
Q ss_pred -C--CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 667 -P--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 667 -p--g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
+ ...|+|.+++|.||+++.|+ |.|+++++++..+.+... .+|... .+ ..+.+++ ++..++.
T Consensus 214 ~~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~-----~~yl~~-~d---~t~~GSR--~g~~~l~ 277 (380)
T PRK02769 214 PPFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVD-----VDYIGS-RD---QTISGSR--NGHTALL 277 (380)
T ss_pred ccCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccC-----ccccCC-CC---CCccCCC--CcHHHHH
Confidence 1 12389999999999986554 467899987655544211 111000 00 1122222 2334567
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
.|+.|..+|.+|+++..++++++++|+.++|++. +++.. .|..+.++|..+ + .++. +||++
T Consensus 278 lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~----~p~~~~v~f~~~--------~-~~~~-----~~w~l 339 (380)
T PRK02769 278 LWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWR----NPNSITVVFPCP--------S-ERIW-----KKWHL 339 (380)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEc----CCCceEEEEcCC--------C-HHHH-----hCeeE
Confidence 8999999999999999999999999999999875 55432 234445555432 1 2332 68987
Q ss_pred CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 823 PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 823 ~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+. ++.++++++...|++.||+|++.|.+....
T Consensus 340 ~~~----~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 340 ATS----GNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred ccc----CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 654 368999999999999999999999887653
No 36
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.8e-25 Score=241.97 Aligned_cols=374 Identities=15% Similarity=0.209 Sum_probs=267.7
Q ss_pred CCCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCC--CcccccccccCccccccCCCCcccccccHHHHHHH
Q 002263 447 LTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKL--NATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 524 (946)
Q Consensus 447 ~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~--~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~e 524 (946)
-++| .++++.+++++.+++....|-.+..+. -|+.+.. +...+........ ++|..+ +.+++..++..+
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~---vS~~v~~~~~~~~~l~~~~~~k---~N~l~~-d~fp~~~~~e~~ 124 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGL---ASGVVYWGEPELDKLIMEAYNK---FNPLHP-DEFPVVRKLEAE 124 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCe---eeEEEecCCcchhhHHHHHHhh---cCccCc-cccchhHHHHHH
Confidence 3678 589999999999998877664433322 2443322 2222222222222 478887 899999999999
Q ss_pred HHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHh----cCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC-C
Q 002263 525 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA----RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 599 (946)
Q Consensus 525 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~----~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~-~ 599 (946)
..+|+|.|++.+...+.. .++.+.++++++.+.|+.. +|. .++.|+++.+.|-...+++++++++++.||++ .
T Consensus 125 ~Vnm~~~L~~~~~~~~g~-~t~G~Ses~l~~~k~~~~~r~~~k~I-~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~ 202 (491)
T KOG1383|consen 125 CVNMIANLFNAPSDSCGC-GTVGGSESGLAAKKSYRNRRKAQKGI-DKPNIVTPQNVHAAFEKAARYFEVELREVPLDEG 202 (491)
T ss_pred HHHHHHHHhcCCccccCc-cccccchHHHHHHHHHHHHHHhccCC-CCccccchHHHHHHHHHHHhhEEEEEEeeecccc
Confidence 999999999988542221 1222334777777777532 354 45678999999999999999999999999998 4
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHH-cCCEEEEecccccccccccCC-Cc-----cC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSP-GY-----IG 671 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~-~g~ll~vD~a~~~a~~gl~~p-g~-----~G 671 (946)
+.++|+..+.+.++ ++|++|+.+.|+ ++|.++ |+++|.++..+ +++++|||+| +|||..| +. ||
T Consensus 203 ~~~~D~~k~~~~i~---eNti~lv~~~~~~p~G~~e-~ve~l~~l~~e~w~ipiHvDa~----~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383|consen 203 DYRVDPGKVVRMID---ENTIMLVGSLPNFPTGEIE-DVEKLADLLLEIWDIPIHVDAC----LGGFINPAGYLNEEEFD 274 (491)
T ss_pred ceEecHHHHHHHhc---cceEEEEEEcCCCCccchh-hHHHHHHHHHHHhCCceeeccc----CccccccccccCccccc
Confidence 68999999999997 899999999998 589999 89999999999 9999999974 7888776 32 22
Q ss_pred -----CCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 672 -----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 672 -----aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
.-.+..+.||. |+--+|++.+.-+. .+.+. ..+ ...+| .|+.+++..+..+.. ++..+++|
T Consensus 275 Fr~p~V~Sisa~~HKY-----Gl~~~G~~~vl~r~k~~~~~---q~~-~~~~w--~Gg~y~s~TlngSR~--g~~va~~w 341 (491)
T KOG1383|consen 275 FRVPGVTSISADGHKY-----GLAPAGSSWVLYRNKELLPH---QLF-FHTDW--LGGIYASPTLNGSRP--GSQVAAQW 341 (491)
T ss_pred cCCCCceeEeecccee-----eeeecCcEEEEEcccccccc---eEE-Eeccc--cCccccCcccccCCc--ccHHHHHH
Confidence 23344566773 22234666655553 22211 111 11233 123344555544432 34667899
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
+.|..+|.+|+++.++++++++.+|++.|+++-.+..-|. |.. .++.+.+ ...+..++.+.|.++||+++.+
T Consensus 342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--p~v--s~~~~~s----~~~~i~elsd~l~~~GW~lnal 413 (491)
T KOG1383|consen 342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--PLV--SFILFGS----NDVNIFELSDLLRKKGWILNAL 413 (491)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--CcE--EEEEccC----CccchhhhhHHHHhcCcCcccc
Confidence 9999999999999999999999999999998633322232 221 2222221 2478899999999999999999
Q ss_pred CCCCCCEEEEEcCCCCCHHH-HHHHHHHHHHHHHHHHH
Q 002263 826 SWPVPGTLMIEPTESESKEE-LDRYCDALISIREEIAQ 862 (946)
Q Consensus 826 ~~p~~~~lri~~t~~~t~~e-id~~~~aL~~i~~e~~~ 862 (946)
.+| .+++||+|..+..++ .|+|+..++++++|+..
T Consensus 414 q~P--~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 414 QFP--AAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred CCC--CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 887 488999998888777 49999999999999988
No 37
>PLN02590 probable tyrosine decarboxylase
Probab=99.94 E-value=3.5e-25 Score=258.65 Aligned_cols=388 Identities=12% Similarity=0.065 Sum_probs=252.9
Q ss_pred CCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCC--Cc-ccccccccCccccccCCCCcccccccHHHHHHHHHHHH
Q 002263 453 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKL--NA-TTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 529 (946)
Q Consensus 453 ~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~--~~-~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~l 529 (946)
.++.+.+++++.+.+..........+..++|+..... .. ..+++. ...+-+.+.. +.+++..+++.++.+|+
T Consensus 105 ~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~----sa~n~~~~~~-~~sPa~t~lE~~vi~wl 179 (539)
T PLN02590 105 ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLN----AGLSVVGFTW-LTSPAATELEIIVLDWL 179 (539)
T ss_pred CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHH----HhcccccCCc-ccCchhHHHHHHHHHHH
Confidence 3567889999999886655543334455666522111 11 111111 1122223333 66788889999999999
Q ss_pred HHhhCCCcc--------cccCCchHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCCCCCHHHHHHcCC---EEEEE
Q 002263 530 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGM---KIVSV 595 (946)
Q Consensus 530 a~l~G~~~~--------~l~~~sGa~ge~a~l~a~r~y~~-~~G~~--~~~~Ili~~saHg~~~~~a~~~G~---~vv~v 595 (946)
++++|++.. .+..++|+.+++.++.+.|.... ..|.. ++-.|++++.+|.+..+++.++|+ .++.|
T Consensus 180 ~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V 259 (539)
T PLN02590 180 AKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL 259 (539)
T ss_pred HHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE
Confidence 999999852 34566777788777777776432 22321 233566889999999999999999 59999
Q ss_pred cCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEeCCCc-ccccccCHHHHHHHHHHcCCEEEEecccccccccccCC--
Q 002263 596 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-- 667 (946)
Q Consensus 596 ~~~~--~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p-- 667 (946)
|+|. ++++|+++|+++|++. +..+.+|+.|..+| +|.|| ||++|+++|++||+|+|||||..... +..|
T Consensus 260 p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD-pl~~Ia~i~~~~g~WlHVDaA~GG~a--l~~~~~ 336 (539)
T PLN02590 260 KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD-PLVPLGNIAKKYGIWLHVDAAYAGNA--CICPEY 336 (539)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCeEEEecchhhhh--hcChhh
Confidence 9984 5799999999999752 22467888888864 89999 79999999999999999999753211 1122
Q ss_pred -----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCCC--CccccCC-CC-CCCCCCCCCCCcccCccc
Q 002263 668 -----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPS--HPVVSTG-GI-PAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 668 -----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp~--~~v~~~~-d~-~~~~~~~~~~~i~~~~~g 736 (946)
|-..+|.++.|+|||+.+|+++| ++.+++. +...+.. ....... +. ........+.. + +
T Consensus 337 r~~~~Gie~ADSit~D~HK~l~~p~~cg-----~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~-l----s 406 (539)
T PLN02590 337 RKFIDGIENADSFNMNAHKWLFANQTCS-----PLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQIS-L----S 406 (539)
T ss_pred HHHhcCCccCCEEEECchhhcCcCcCEE-----EEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCC-C----C
Confidence 22358999999999999998765 7888853 2211100 0000000 00 00000001111 1 2
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEeccccccc-C--CCCHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-A--GIEPEDV 811 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~-~--g~~~~~i 811 (946)
....++..|+.|+.+|.+|+++..++.+++|+|+.+.|++. |+++.+ +.+..++|++.+-... . +.-..++
T Consensus 407 Rr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~----~~l~iVcFr~~~~~~~~~~~~~ln~~l 482 (539)
T PLN02590 407 RRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT----RYFSLVCFRLAPVDGDEDQCNERNREL 482 (539)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CceEEEEEEecCCCCCHHHHHHHHHHH
Confidence 23456788999999999999999999999999999999875 666532 4556677776531000 0 0012467
Q ss_pred HHHHHHCCccc-CCCCCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 812 AKRLMDYGFHG-PTMSWPVPGTLMIEPT-ESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 812 ~~~L~~~Gi~~-~~~~~p~~~~lri~~t-~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.++|.+.|... ....+.....||+++. ..++++|||.+++.|.+..+++..
T Consensus 483 ~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 483 LAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred HHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 77777777652 2111111247899885 457789999999999888666543
No 38
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.94 E-value=3.3e-25 Score=256.18 Aligned_cols=294 Identities=13% Similarity=0.087 Sum_probs=213.4
Q ss_pred HHhCCCCcceEEcccHHHHHHHHHHHhccccC-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEE----EEecc--------
Q 002263 110 DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKV----VVSDL-------- 176 (946)
Q Consensus 110 ~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~-~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v----~~~~~-------- 176 (946)
+++|++++++.+++++|.++..++.++ +..+ ++++|+++..+||++...|+..++..|+++ +.++.
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 158 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRL 158 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCH
Confidence 899999889999999998877766554 2211 234788999999999998876566678776 34432
Q ss_pred ccccc-c---CCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccc
Q 002263 177 KDIDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGV 249 (946)
Q Consensus 177 ~~l~~-i---~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~ 249 (946)
+++++ + +++|++|+++++ |.+|.+.|+++|+++||++|++++|++ .+++|.++ +..++|+|++++++ |+|
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~-aq~~G~~~id~~~~gvD~~~~s~hK~l-- 235 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDL-AHAVGNVPLDLHDWGVDFACWCTYKYL-- 235 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEc-ccccCCcccccccCCCCEEEEcCcccc--
Confidence 34444 3 478999999987 568999999999999999999999943 34666543 45689999999999 555
Q ss_pred cCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh
Q 002263 250 PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE 329 (946)
Q Consensus 250 P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~ 329 (946)
+|||| |+++++++....+.+++.|+.-..... .|........+..|++.||+|+ .+++++.+++ .++...
T Consensus 236 ---~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~GT~~~---~~~~~l~~al--~~~~~~ 305 (406)
T TIGR01814 236 ---NAGPG-AGAFVHEKHAHTERPRLAGWWGHARPT-RFKMDNTLGLIPCGFRISNPPI---LSVAALRGSL--DIFDQA 305 (406)
T ss_pred ---CCCCC-eEEEEehhhhhhcCCCCCcccCCCCcc-ccccccccCCCccceeeCCccH---HHHHHHHHHH--HHHHhc
Confidence 35677 667776655545555566642111000 0111110112334678899998 4666676666 666677
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcC-C---CEEEcCCC----CcCeEEEecC-CHHHHHHHHHHcCCeeeeecCCeEEEEe-
Q 002263 330 GLKTIAQRVHGLAGTFALGLKKL-G---TVEVQGLP----FFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASF- 399 (946)
Q Consensus 330 Gl~~i~~~~~~~a~~l~~~L~~~-g---~~~~~~~~----~~~~~~i~~~-~~~~v~~~L~~~GI~~~~~~~~~lris~- 399 (946)
|++++.+++..+++++++.|+++ | ++++++.. ....++|.++ ++.++.++|.++||.+....++.||+|+
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~~~iRiS~~ 385 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREPSVIRVAPV 385 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCCCeEEEech
Confidence 89999999999999999999875 2 38777531 2345777776 4789999999999988654457899999
Q ss_pred ccCCCHHHHHHHHHHHhC
Q 002263 400 DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 400 ~~~~t~edid~ll~~l~~ 417 (946)
+.+||++||++++++|+.
T Consensus 386 ~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 386 PLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred hccCCHHHHHHHHHHHHH
Confidence 689999999999999963
No 39
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1.2e-24 Score=251.51 Aligned_cols=307 Identities=18% Similarity=0.136 Sum_probs=228.3
Q ss_pred hhHHHHHHHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 95 QGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~la~~~~-~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
.-..+.+.++++.+++++|++ +.++.+++|+|.++..++.++... .++|++||+++.+|+++...++.+++..|++++
T Consensus 58 ~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~ 137 (403)
T TIGR01979 58 VRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLK 137 (403)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEE
Confidence 334567889999999999998 568989999998777665554210 127899999999999999888877777899988
Q ss_pred Eecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEE
Q 002263 173 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 241 (946)
Q Consensus 173 ~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v 241 (946)
.+++ +++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|+. .++.+.. .+..++|+|+++
T Consensus 138 ~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~g~~~~~~~~~~~d~~~ 216 (403)
T TIGR01979 138 FIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDG-AQAVPHMPVDVQALDCDFYV 216 (403)
T ss_pred EEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEc-hhhcCccccCccccCCCEEE
Confidence 8765 34555 6788999999987 679999999999999999999999943 3344443 234678999999
Q ss_pred eccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEe-cccccccccccccCCCccchHHHHHHHHH
Q 002263 242 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA-MQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 242 ~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~-l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
+|++|+.+| +|+|++++++++.+.+++...|+.... .+.+. ...+....|++.||+|+ ..++++.++
T Consensus 217 ~s~~K~~gp-----~G~g~l~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~gt~~~---~~~~al~~a 284 (403)
T TIGR01979 217 FSGHKMYGP-----TGIGVLYGKEELLEQMPPFLGGGEMIA----EVSFEETTYNEAPHKFEAGTPNI---AGVIGLGAA 284 (403)
T ss_pred EecccccCC-----CCceEEEEchHHHhcCCCeecCCCcee----ecccCccccCCChhhcCCCCccH---HHHHHHHHH
Confidence 999444333 458999999999888876655532110 00000 00112234567788887 345555555
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC----CcCeEEEecCC--HHHHHHHHHHcCCeeeee----
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP----FFDTVKVKCAD--AHAIASAAYKIEMNLRVV---- 390 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~---- 390 (946)
+ .++...|++++.+++.+++++++++|+++++++++.+. ....++|.+++ ..++.+.|.++||.++.-
T Consensus 285 l--~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~ 362 (403)
T TIGR01979 285 I--DYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCA 362 (403)
T ss_pred H--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhh
Confidence 4 55556688999999999999999999988449987532 23456676655 678999999999988531
Q ss_pred --------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 --------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 --------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.++.+|+|++.+||++|+++++++|+
T Consensus 363 ~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 363 QPLMRRFGVPATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred HHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHH
Confidence 15789999999999999999999996
No 40
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=1.1e-24 Score=251.19 Aligned_cols=298 Identities=19% Similarity=0.186 Sum_probs=221.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
.+++..+.+.++++.+++++|.+..++.+..++|.++..+..++....++||+||+++.+|+++...|...++..|++++
T Consensus 54 ~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~ 133 (397)
T TIGR01976 54 SSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVK 133 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEE
Confidence 35677788899999999999998778888888887665544443211137899999999999999888666777899988
Q ss_pred Eeccc---------cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEE
Q 002263 173 VSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIV 240 (946)
Q Consensus 173 ~~~~~---------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~ 240 (946)
.++.+ ++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++||. .++.+.. .+..++|+|++
T Consensus 134 ~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~ 212 (397)
T TIGR01976 134 WARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDA-VHYAPHGLIDVQATGADFL 212 (397)
T ss_pred EEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEeh-hhhccccCCCHHHcCCCEE
Confidence 87542 3455 6778999999998 679999999999999999999999943 2233322 24467899999
Q ss_pred Eecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHH
Q 002263 241 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 319 (946)
Q Consensus 241 v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~a 319 (946)
++|+ |+| ||..|++++++++++.+.+.... +.+ .....|++.||.|+. .+.++.+
T Consensus 213 ~~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~----------~~~----~~~~~~~~~gt~~~~---~~~~l~~ 268 (397)
T TIGR01976 213 TCSAYKFF-------GPHMGILWGRPELLMNLPPYKLT----------FSY----DTGPERFELGTPQYE---LLAGVVA 268 (397)
T ss_pred EEechhhc-------CCceEEEEEcHHHHhhCCCcccc----------Ccc----CCCcchhcCCCCCHH---HHHHHHH
Confidence 9998 544 24589999999988877543221 111 112235678999883 4445555
Q ss_pred HH-HHHHhCh-----------hhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC----CCcCeEEEecCC--HHHHHHHHH
Q 002263 320 AM-YAVYHGP-----------EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD--AHAIASAAY 381 (946)
Q Consensus 320 a~-y~~~~g~-----------~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~----~~~~~~~i~~~~--~~~v~~~L~ 381 (946)
++ ++...|. ++++++.+++.+++++++++|+++++++++.. ...+.+.+..++ +.++.++|.
T Consensus 269 al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 348 (397)
T TIGR01976 269 AVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLA 348 (397)
T ss_pred HHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHH
Confidence 55 3333331 14788899999999999999999855888743 234566676654 788999999
Q ss_pred HcCCeeeee---------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 382 KIEMNLRVV---------------DSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 382 ~~GI~~~~~---------------~~~~lris~~~~~t~edid~ll~~l 415 (946)
++||.++.. ..+.+|+|++.+||++|+++++++|
T Consensus 349 ~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 349 DQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 999998642 1357999999999999999999875
No 41
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=1.1e-24 Score=248.12 Aligned_cols=308 Identities=16% Similarity=0.160 Sum_probs=225.6
Q ss_pred CCcHHHHHHHHhCCccccc-c-CCCh--hhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHh-ccccC
Q 002263 67 HVPPVILRNIMENPAWYTQ-Y-TPYQ--AEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKG 141 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~-~-~pyq--~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~-~~~~~ 141 (946)
.+|..+.+.+.. |+.. + .|.. ...+....+.+.++++.+++++|.++.++.++.++|.++..++.++ ....+
T Consensus 10 ~~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~ 86 (364)
T PLN02651 10 PIDPRVLDAMLP---FLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKD 86 (364)
T ss_pred CCCHHHHHHHHH---HHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccC
Confidence 577777656553 2221 1 2321 1123445677889999999999998888999999987765544332 21113
Q ss_pred CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHH
Q 002263 142 KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAH 211 (946)
Q Consensus 142 ~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~ 211 (946)
+|++|+++..+||++...|..+. ..|++++.++. +++++ ++++|++|+++++ |.+|.+.|+++|+++||
T Consensus 87 ~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~ 165 (364)
T PLN02651 87 KKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCR 165 (364)
T ss_pred CCCEEEEcccccHHHHHHHHHHH-hcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHH
Confidence 78999999999999998887654 57888888765 34555 7788999999887 67999999999999999
Q ss_pred hCCcEEEEEecCccccCC-CCCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEE
Q 002263 212 ANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 290 (946)
Q Consensus 212 ~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l 290 (946)
++|++++||+ .++.+.+ .+..++|+|+++++++||++| +|.|++++++++..++.+.+.|+. .
T Consensus 166 ~~g~~~~vD~-a~~~g~~~~~~~~~~~D~~~~s~hK~~gp-----~G~g~l~v~~~~~~~l~p~~~g~~------~---- 229 (364)
T PLN02651 166 EKKVLFHTDA-AQAVGKIPVDVDDLGVDLMSISGHKIYGP-----KGVGALYVRRRPRVRLEPLMSGGG------Q---- 229 (364)
T ss_pred HcCCEEEEEc-chhhCCcccCcccCCCCEEEechhhhCCC-----CceEEEEEcCCCCCCCCccccCCC------c----
Confidence 9999999943 3355543 356789999999999667544 468999999998888877665521 0
Q ss_pred ecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCC--C--C-cC
Q 002263 291 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL--P--F-FD 364 (946)
Q Consensus 291 ~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~--~--~-~~ 364 (946)
..+++.||+|+ .+++++.+++ .++.. +.+++.+++.+++++++++|++ +++++++.+ + . ..
T Consensus 230 -------~~~~~~GT~~~---~~~~~l~~al--~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~ 296 (364)
T PLN02651 230 -------ERGRRSGTENT---PLVVGLGAAC--ELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPG 296 (364)
T ss_pred -------cCCccCCCccH---HHHHHHHHHH--HHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCC
Confidence 12356899998 5677777776 44433 4589999999999999999986 533999863 1 1 23
Q ss_pred eEEEecCC--HHHHHHHHHHcCCeeee-----------------e------cCCeEEEEeccCCCHHHHH
Q 002263 365 TVKVKCAD--AHAIASAAYKIEMNLRV-----------------V------DSNTVTASFDETTTLEDVD 409 (946)
Q Consensus 365 ~~~i~~~~--~~~v~~~L~~~GI~~~~-----------------~------~~~~lris~~~~~t~edid 409 (946)
.++|.+++ +.+++++|.+ |.++. + ..+.||+|++.+||++|||
T Consensus 297 i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 297 TLNLSFAYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EEEEEeCCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 67777776 7889999965 65531 0 1368999999999999985
No 42
>PLN02880 tyrosine decarboxylase
Probab=99.94 E-value=1.8e-24 Score=252.89 Aligned_cols=387 Identities=14% Similarity=0.083 Sum_probs=249.7
Q ss_pred CCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccc--cCCCC-cccccccHHHHHHHHHHHH
Q 002263 453 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN--IHPFA-PADQAQGYQEMFNNLGEWL 529 (946)
Q Consensus 453 ~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~--~~p~~-p~e~~qG~~~~~~el~~~l 529 (946)
+++.+.+++++.+.+.-.......++..++|+.... +...... .++.. +++.. ..+.+++..+++.++.+|+
T Consensus 57 ~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~--~~~~~~l---ad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl 131 (490)
T PLN02880 57 NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSN--SSVAGFL---GEMLSAGLNIVGFSWITSPAATELEMIVLDWL 131 (490)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCC--CcHHHHH---HHHHHHhhccCCcccccCcccHHHHHHHHHHH
Confidence 466788999999987554443323445556652111 1111110 11111 22111 1155678889999999999
Q ss_pred HHhhCCCcc--------cccCCchHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCCCCCHHHHHHcCCE---EEEE
Q 002263 530 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGMK---IVSV 595 (946)
Q Consensus 530 a~l~G~~~~--------~l~~~sGa~ge~a~l~a~r~y~~-~~G~~--~~~~Ili~~saHg~~~~~a~~~G~~---vv~v 595 (946)
++++|++.. .+..++|+.+++.++++.|.+.. ..|.. ++-.|++++.+|.+..+++.++|+. ++.|
T Consensus 132 ~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V 211 (490)
T PLN02880 132 AKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL 211 (490)
T ss_pred HHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe
Confidence 999999852 34556778888777777776432 22321 3346778999999999999999994 8999
Q ss_pred cCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEeCCCc-ccccccCHHHHHHHHHHcCCEEEEecccccccccccC---
Q 002263 596 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--- 666 (946)
Q Consensus 596 ~~~~--~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~--- 666 (946)
|+|+ ++++|+++|+++|++. +..+.+|+.|..+| +|.++ |+++|+++|+++|+|+|||||+..+. +..
T Consensus 212 p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD-pl~eI~~i~~~~~iwlHVDaA~gg~~--~~~~~~ 288 (490)
T PLN02880 212 KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD-PLLELGKIAKSNGMWFHVDAAYAGSA--CICPEY 288 (490)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC-cHHHHHHHHHHcCCEEEEehhhHHHH--HhCHHH
Confidence 9975 5799999999999753 23467788888864 89999 79999999999999999999864221 112
Q ss_pred ----CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCCC---CccccCCCC-CCCCCCCCCCCcccCccc
Q 002263 667 ----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPS---HPVVSTGGI-PAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 667 ----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp~---~~v~~~~d~-~~~~~~~~~~~i~~~~~g 736 (946)
.|-.++|.++.|+|||++.|+++ |++++++. +...+.. .+.....+. +.+.....+ + +.|
T Consensus 289 ~~~l~gie~aDSit~d~HKwl~~P~~~-----g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~--i---~~~ 358 (490)
T PLN02880 289 RHYIDGVEEADSFNMNAHKWFLTNFDC-----SLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQ--I---PLG 358 (490)
T ss_pred HHHhcCchhcCEEEECchhhcCCCccE-----EEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccC--c---CCC
Confidence 23357999999999999888765 48888852 1111110 000000000 000000000 1 112
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCH----HH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEP----ED 810 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~----~~ 810 (946)
....++..|+.++.+|.+|+++..++.+++|+|+.+.|++. ++++.+ +..+.++|++++... ..... .+
T Consensus 359 rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~----~~~~iv~Fr~~~~~~-~~~~~~~~n~~ 433 (490)
T PLN02880 359 RRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP----RIFSLVCFRLVPPKN-NEDNGNKLNHD 433 (490)
T ss_pred CcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC----CceEEEEEEEeCCCC-ChhhHHHHHHH
Confidence 23345678999999999999999999999999999999875 555432 345556777653110 00011 34
Q ss_pred HHHHHHHCCcc-cCCCCCCCCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFH-GPTMSWPVPGTLMIEPTES-ESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 811 i~~~L~~~Gi~-~~~~~~p~~~~lri~~t~~-~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.++|.+.|.. +....+.....+|+++.-. ++.+|+|++++.|.++.+++..
T Consensus 434 l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 434 LLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred HHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66666665543 3322222346799998765 4569999999999998877644
No 43
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=2e-24 Score=236.60 Aligned_cols=309 Identities=18% Similarity=0.241 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHH-HHHhcCCCCCCEEEEcCCCCCCCHHHHHHc---CCEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA-YHKARGDHHRNVCIIPVSAHGTNPATAAMC---GMKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~-y~~~~G~~~~~~Ili~~saHg~~~~~a~~~---G~~vv 593 (946)
..+++++.++.+++++|.+...+..+||++ ++..++++. +...+...++..||++...|.+.-..+..+ |++|.
T Consensus 42 A~~~ve~AR~~iA~llga~~~eIiFTSG~T--EsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vt 119 (386)
T COG1104 42 ARKAVEEAREQIAKLLGADPEEIIFTSGAT--ESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEecCCc--HHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEE
Confidence 567899999999999999986545455432 244445443 111111125678999988877766666655 99999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 672 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga 672 (946)
++|++.+|.+|+++|+++|+ ++|.+|.+.+.| .+|+++ ||++|+++|+++|+++|+|+++..+-..+ .+.++++
T Consensus 120 yl~V~~~G~v~~e~L~~al~---~~T~LVSim~aNnE~G~IQ-pI~ei~~i~k~~~i~fHvDAvQa~Gkipi-~~~~~~v 194 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALR---PDTILVSIMHANNETGTIQ-PIAEIGEICKERGILFHVDAVQAVGKIPI-DLEELGV 194 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcC---CCceEEEEEecccCeeecc-cHHHHHHHHHHcCCeEEEehhhhcCceec-cccccCc
Confidence 99999999999999999997 899999999985 699999 79999999999999999999875333222 3456789
Q ss_pred CEEEeCCCcccccCCCCCCC-cceeEEEeccc--CCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHL--APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l--~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
|++.+|.|| ++|| |+|++++++.. .+.+.|. |+ .+++..+|.|+.+ ++. .+...
T Consensus 195 D~ls~SaHK-------~~GpkGiGaLyv~~~~~~~p~i~GG--gQ-----E~g~RsGTenv~~-------Ivg--~~~A~ 251 (386)
T COG1104 195 DLLSFSAHK-------FGGPKGIGALYVRPGVRLEPLIHGG--GQ-----ERGLRSGTENVPG-------IVG--FGKAA 251 (386)
T ss_pred ceEEeehhh-------ccCCCceEEEEECCCCccCceeccC--cC-----CCCCCCCCccHHH-------HHH--HHHHH
Confidence 999999999 4566 99999997643 3333321 11 1222345555532 111 11122
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCC-CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 826 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~-~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~- 826 (946)
.+..+.+.....+.....++|.++|.+. ..+...|.. ....|.+.+.++ +++++.+.-.|..+||.+++-+
T Consensus 252 ~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~------gv~gE~ll~~L~~~gI~vStGSA 325 (386)
T COG1104 252 EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP------GVEGESLLLALDLAGIAVSTGSA 325 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC------CCcHHHHHHhccccCeEEecccc
Confidence 2333445555566667788888888875 455444432 234466777776 6889999999999999975421
Q ss_pred ------CC-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 ------WP-------------VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 ------~p-------------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
-| ..++|||+++..+|++|+|+++++|.++++.++.
T Consensus 326 CsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 326 CSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred ccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 12 1478999999999999999999999999999886
No 44
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.94 E-value=9.3e-25 Score=251.23 Aligned_cols=341 Identities=20% Similarity=0.211 Sum_probs=240.0
Q ss_pred CCCCCHHHHHHHHHHHHcCccCcCCc-c--ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHH
Q 002263 453 NKYHTEHELLRYIHLLQSKELSLCHS-M--IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 529 (946)
Q Consensus 453 ~~~~se~e~~r~~~~l~~~~~~~~~~-~--~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~l 529 (946)
+.+.++++++.++..+..+|....++ . ...++|.....+....... .+.+-+...+ +.++++.++..++..|+
T Consensus 35 ~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~---~~~~~nl~d~-~~~p~a~~~E~~~v~~l 110 (460)
T COG0076 35 EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV---SALNKNLGDP-DESPAAAELEERVVNML 110 (460)
T ss_pred ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH---HHHhhcCCCc-ccChhHHHHHHHHHHHH
Confidence 56889999999999987777655331 2 2235555444433333221 2333344445 77889999999999999
Q ss_pred HHhhCCCc--ccccCCchHHHHHHHHHHHHHHHH-hc---C--CCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-C
Q 002263 530 CTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHK-AR---G--DHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 600 (946)
Q Consensus 530 a~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~-~~---G--~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~ 600 (946)
++|+|.+. ...++.+|+++++-+++++|.... .. + ..+.++||+|.++|.++.+++.++|++.+.++.++ +
T Consensus 111 ~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~ 190 (460)
T COG0076 111 SDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD 190 (460)
T ss_pred HHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc
Confidence 99999963 345667778777766666665332 11 1 11245799999999999999999999999999988 7
Q ss_pred CCCCHHHHHHHHHhcCCCeEE--EEEeCCCc-ccccccCHHHHHHHHHHcCCEEEEecccccccccccCC-----Cc---
Q 002263 601 GNINIEELRKAAEANRDNLST--LMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-----GY--- 669 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~--vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p-----g~--- 669 (946)
.++|+++|+++|+ ++|.. |+.+.++| +|.+| ||++|+++|+++|+|+|||+| +||+..| +.
T Consensus 191 ~~id~~~l~~~i~---~~t~~g~vV~~aGtT~~G~iD-di~~ia~ia~~~~i~lHVDAA----~GG~~~pf~~~~~~~~f 262 (460)
T COG0076 191 YRIDVDALEEAID---ENTIGGVVVGTAGTTDTGSID-DIEELADIAEEYGIWLHVDAA----FGGFLLPFLEPDGRWDF 262 (460)
T ss_pred cccCHHHHHHHHH---hhccCceEEEEecCCCCCccC-CHHHHHHHHHHcCCcEEEEcc----ccceeecccCccchhhc
Confidence 9999999999998 66766 88888874 89999 899999999999999999986 4554332 22
Q ss_pred --cCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 670 --IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 670 --~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
-++|.++.|+||++..|.++ |.+.+++. +.+.+-.. ..+. .+.......+.+++ .+..+++.|
T Consensus 263 ~l~~vdSIt~d~HK~g~aP~~~-----G~il~rd~e~l~~~~~~~-----~~yl-~~~~~~~~ti~~sr--~~~~~~~~~ 329 (460)
T COG0076 263 GLEGVDSITVDGHKYGLAPIGC-----GVVLFRDEEALRRILIFA-----DYYL-PGGGIPNFTILGSR--PGRQALALY 329 (460)
T ss_pred CCCCceEEEECcccccCCCCCc-----eEEEEECHHHhhhhhhcc-----cccC-CCCCcCceeEeecc--chHHHHHHH
Confidence 27899999999999888554 57888754 33221100 0000 00000111121122 233567889
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCC-CHHHHHHHHHHCCccc
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGFHG 822 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~-~~~~i~~~L~~~Gi~~ 822 (946)
+.|+.+|.+|++++.++++++++|++++|++. ++++. .|..+.++|+.++ .. ...+..+++...||.+
T Consensus 330 ~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~----~p~l~~V~fr~~~-----~~~~~~~~~~~~~~~gw~v 400 (460)
T COG0076 330 ANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVN----EPELPIVAFRLKD-----DEDTLADLSERLDRRGWQV 400 (460)
T ss_pred HHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeec----CCccceEEEEcCC-----cccchhchHHHHHhcCcee
Confidence 99999999999999999999999999999985 77753 2455567777642 11 2567778888899997
Q ss_pred CCCCC
Q 002263 823 PTMSW 827 (946)
Q Consensus 823 ~~~~~ 827 (946)
+....
T Consensus 401 ~~~~~ 405 (460)
T COG0076 401 PAQLL 405 (460)
T ss_pred ecccC
Confidence 65433
No 45
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=7.2e-24 Score=243.01 Aligned_cols=292 Identities=17% Similarity=0.178 Sum_probs=218.4
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 94 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 94 sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
+....+.+.++++.+++++|.++.++.+++++|.++..++.++.....++++||++..+||++...++.+. ..|++++.
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-~~G~~v~~ 115 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLE-KQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHH-HcCCEEEE
Confidence 44567788999999999999998889999999988776665432111256899999999999998887654 37999888
Q ss_pred ecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEe
Q 002263 174 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 242 (946)
Q Consensus 174 ~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~ 242 (946)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|+++++|+ ..+.+..+ +..++|+|++++
T Consensus 116 v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-~~~~g~~~~~~~~~~~D~~~~ 194 (379)
T TIGR03402 116 LPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDA-VQAVGKIPIDLKEMNIDMLSL 194 (379)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEEC-cccccccccCcccCCCCEEEE
Confidence 764 34555 7788999999887 779999999999999999999999943 33555443 456799999999
Q ss_pred ccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHH
Q 002263 243 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 322 (946)
Q Consensus 243 s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y 322 (946)
|++|+++| +|+|+++++++.. +.+.+.|. . +..+++.||.|+ .+++++.+++
T Consensus 195 s~~K~~gp-----~G~g~l~v~~~~~--~~p~~~g~------~-----------~~~~~~~gt~~~---~~~~~l~~al- 246 (379)
T TIGR03402 195 SGHKLHGP-----KGVGALYIRKGTR--FRPLLRGG------H-----------QERGRRAGTENV---PGIVGLGKAA- 246 (379)
T ss_pred cHHHcCCC-----CceEEEEECCCCC--CCCcccCC------c-----------cCCCcCCCCccH---HHHHHHHHHH-
Confidence 99557544 4689999997652 33333331 0 011244789888 4666666665
Q ss_pred HHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCCC--C-cCeEEEecCC--HHHHHHHHHHcCCeeeee------
Q 002263 323 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRVV------ 390 (946)
Q Consensus 323 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~~--~-~~~~~i~~~~--~~~v~~~L~~~GI~~~~~------ 390 (946)
.++ .++++++.+++.++.++++++|++ +.++++.++. . ...++|.++. +.++.+.|.++||.++.-
T Consensus 247 -~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~ 324 (379)
T TIGR03402 247 -ELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSG 324 (379)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCC
Confidence 332 346788889999999999999986 6448887532 2 2345555554 788999999999987521
Q ss_pred -----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -----------------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -----------------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.||+|++.+||++|||+++++|+.
T Consensus 325 ~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 325 SLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred CCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999974
No 46
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.93 E-value=1.8e-23 Score=239.09 Aligned_cols=307 Identities=18% Similarity=0.149 Sum_probs=228.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
.++...+.+.++++.+++++|.+ +.++.+++|+|.++..++.++.....+|++|+++...|++....+...++..|+++
T Consensus 37 ~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~ 116 (373)
T cd06453 37 LSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKL 116 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEE
Confidence 34566778888999999999998 67888899999777766655532111689999999999998877766666689999
Q ss_pred EEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEE
Q 002263 172 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 240 (946)
Q Consensus 172 ~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~ 240 (946)
+.++. +++++ +++++++|++++| |.+|.+.|+++|.++||++|+++++|+ ..+.+.+. +..++|+|++
T Consensus 117 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~ 195 (373)
T cd06453 117 KVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDG-AQSAGHMPVDVQDLGCDFL 195 (373)
T ss_pred EEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEh-hhhcCceeeeccccCCCEE
Confidence 88765 34555 6778999999987 679999999999999999999999953 23444432 3457899999
Q ss_pred Eecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEee-cCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 241 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 241 v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~-d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
++++ |+|+ +|+.|++++++++.+.+.....|+.. +......+ +......+++.+|+|+. .++++.
T Consensus 196 ~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~t~~~~---~~~al~ 262 (373)
T cd06453 196 AFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET----TYADLPHKFEAGTPNIA---GAIGLG 262 (373)
T ss_pred EeccccccC------CCCcEEEEEchHHhhcCCCeecCCCcccccccccc----ccCCCccccCCCCCCHH---HHHHHH
Confidence 9998 5553 35689999999998888765544311 10000001 11233445667888874 455555
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCcCeEEEecCC--HHHHHHHHHHcCCeeeee----
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV---- 390 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~---- 390 (946)
+++ .++..+|++++.++..++++++++.|+++++++++.+ .....+.|..++ +.++.++|.++||.++.-
T Consensus 263 ~al--~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~ 340 (373)
T cd06453 263 AAI--DYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCA 340 (373)
T ss_pred HHH--HHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccch
Confidence 555 6677789999999999999999999999854888742 223456666654 789999999999987521
Q ss_pred --------cCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 391 --------DSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 391 --------~~~~lris~~~~~t~edid~ll~~l 415 (946)
.++.||+|++.++|++|+|+|+++|
T Consensus 341 ~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 341 QPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred hHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1468999999999999999999874
No 47
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=2.6e-23 Score=237.85 Aligned_cols=361 Identities=18% Similarity=0.251 Sum_probs=235.3
Q ss_pred CHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC
Q 002263 457 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 536 (946)
Q Consensus 457 se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~ 536 (946)
||+|++..++++-+.......+.+.+..|++..+...+.... +...+...+ ...+|..++..++++++++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~ 75 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAVKAYDM----FIETNLGDP-GLFPGTKKIEEEVVGSLGNLLHLP 75 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHHHHHHH----HhhcCCCCc-ccCccHHHHHHHHHHHHHHHhCCC
Confidence 689999999999877766533333334465544443332211 111011111 223466778889999999999997
Q ss_pred ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhc
Q 002263 537 SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 615 (946)
Q Consensus 537 ~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~ 615 (946)
... +..++|+.+...++.+++... ..+ .++++|+++...|.++...++..|++++.+++++++.+|+++|+++++
T Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~-- 151 (373)
T TIGR03812 76 DAYGYIVSGGTEANIQAVRAAKNLA-REE-KRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLID-- 151 (373)
T ss_pred CCCeEEeccHHHHHHHHHHHHHHHH-hcc-CCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHh--
Confidence 543 444555544433333332211 111 245789999998988888889999999999998889999999999997
Q ss_pred CCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-----C-C---CccCCCEEEeCCCccccc
Q 002263 616 RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-----S-P---GYIGADVCHLNLHKTFCI 685 (946)
Q Consensus 616 ~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-----~-p---g~~GaDi~~~s~hK~f~~ 685 (946)
+++.++++..| |.+|.+. |+++|+++||++|++++||+|+......+. . + ...|+|.++++.||+...
T Consensus 152 -~~~~~vv~~~~~~~tG~~~-~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~ 229 (373)
T TIGR03812 152 -DNTIGIVGIAGTTELGQID-DIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLS 229 (373)
T ss_pred -hCcEEEEEECCCCCCCccC-CHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCC
Confidence 55544444445 5689998 799999999999999999998742221111 1 1 124889999999997543
Q ss_pred CCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHH
Q 002263 686 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 765 (946)
Q Consensus 686 P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~ 765 (946)
|. |..|+++.++++.+.+.... .+....+. ....++. +...++.+++.+..++++|+.+..++..+
T Consensus 230 ~~----~~G~~~~~~~~~~~~l~~~~-----~~~~~~~~--~~~~gt~---~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 230 PI----PAGGILFRSKSYLKYLSVDA-----PYLTVKKQ--ATITGTR---SGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred cC----CceEEEEeCHHHHhhhcccC-----cccCCCCC--cceEeec---hhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 32 22245555666555442110 00000000 0001111 12335567788899999999999999999
Q ss_pred HHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHH
Q 002263 766 NANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 844 (946)
Q Consensus 766 ~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~ 844 (946)
++++|+++|++. +...+. +..+.+.+..+ +..++.++|.++||.+..... +..+|++++..+|++
T Consensus 296 ~~~~l~~~L~~~g~~~~~~----~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~e 361 (373)
T TIGR03812 296 NTRYLVEELKKIGFEPVIE----PVLNIVAFEVD--------DPEEVRKKLRDRGWYVSVTRC--PKALRIVVMPHVTRE 361 (373)
T ss_pred HHHHHHHHHHhCCCeEEcC----CCceEEEEEeC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCHH
Confidence 999999999885 433332 22333444432 346899999999999864432 478999999999999
Q ss_pred HHHHHHHHHHHH
Q 002263 845 ELDRYCDALISI 856 (946)
Q Consensus 845 eid~~~~aL~~i 856 (946)
|+|+|+++|++|
T Consensus 362 did~l~~~L~~~ 373 (373)
T TIGR03812 362 HIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHHhhC
Confidence 999999999763
No 48
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=4.1e-23 Score=236.40 Aligned_cols=301 Identities=15% Similarity=0.166 Sum_probs=222.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 95 QGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
++..+.+.++++.+++++|++.. ++.+++++|.++..++.++ +. +||+|+++...|+++..++...++..|++++.
T Consensus 40 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (376)
T TIGR01977 40 LRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL-LK--EGDHVITTPMEHNSVARPLECLKEQIGVEITI 116 (376)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc-cC--CCCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 34557788999999999999754 7888899998777666553 23 78999999999999998887777777988888
Q ss_pred ecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEe
Q 002263 174 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 242 (946)
Q Consensus 174 ~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~ 242 (946)
++. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++||+ .+++|... +..++|+|++++
T Consensus 117 v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~-a~~~g~~~~~~~~~~~D~~~~ 195 (376)
T TIGR01977 117 VKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDA-AQTAGVIPIDMTELAIDMLAF 195 (376)
T ss_pred EecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEh-hhccCccCCCchhcCCCEEEe
Confidence 764 34555 7778999999988 679999999999999999999999942 34555543 345789999999
Q ss_pred cc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 243 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 243 s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
++ |++++| +|.|+++++++. .+.+...|+.. .+.+.+.. .+....|++.+|.|+ ..+.++.+++
T Consensus 196 s~~K~l~~p-----~g~g~l~~~~~~--~~~~~~~~~~~----~~~~~~~~-~~~~~~r~~~~t~~~---~~~~a~~~al 260 (376)
T TIGR01977 196 TGHKGLLGP-----QGTGGLYIREGI--KLKPLKSGGTG----SHSALIDQ-PSELPDRFESGTLNT---PGIAGLNAGI 260 (376)
T ss_pred cccccccCC-----CCceEEEEcCCc--CcCceecCCCc----cccccccc-cccchhhccCCCCCH---HHHHHHHHHH
Confidence 99 666544 357888888765 12222222100 00011111 111223567788887 4555666565
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--C--CcCeEEEecCC--HHHHHHHHHHc-CCeeee-----
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--P--FFDTVKVKCAD--AHAIASAAYKI-EMNLRV----- 389 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~--~~~~~~i~~~~--~~~v~~~L~~~-GI~~~~----- 389 (946)
.++...|++++.+++.++++++++.|+++++++++.+ + ....+.|..++ ..++.+.|.++ ||.++.
T Consensus 261 --~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~ 338 (376)
T TIGR01977 261 --KFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCA 338 (376)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccc
Confidence 6777889999999999999999999998755888752 1 23456666665 78899999987 887743
Q ss_pred ---------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 ---------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ---------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
...+.+|+|++.++|++|+++++++|+
T Consensus 339 ~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~ 374 (376)
T TIGR01977 339 PLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALS 374 (376)
T ss_pred hHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHh
Confidence 134789999999999999999999986
No 49
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.92 E-value=3e-23 Score=257.18 Aligned_cols=308 Identities=14% Similarity=0.118 Sum_probs=219.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcc--eEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK 170 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~--~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~ 170 (946)
.++-..+.+.++++.+|+++|+++.+ +.++.++|.++..+..++.+. +|++||++..+|++++. |+.+++..|++
T Consensus 72 ~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~--~gd~Iv~t~~eH~svl~-~~~~a~~~G~~ 148 (805)
T PLN02724 72 SSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWS--SESHFCYTLENHNSVLG-IREYALEKGAA 148 (805)
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCC--CCCeEEEeeccccchHH-HHHHHHHcCCe
Confidence 46667788999999999999997654 688888997766554444333 78999999999999885 55666778999
Q ss_pred EEEeccc------------------cccc-c----------CCCEeEEEEEc-CCCceeecchHHHHHHHHhC-------
Q 002263 171 VVVSDLK------------------DIDY-K----------SGDVCGVLVQY-PGTEGEVLDYGDFIKNAHAN------- 213 (946)
Q Consensus 171 v~~~~~~------------------~l~~-i----------~~~t~~v~v~~-pn~~G~i~di~~i~~~a~~~------- 213 (946)
+++++++ ++++ + +++|++|++++ +|.+|.+.|++.|..+++..
T Consensus 149 v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~ 228 (805)
T PLN02724 149 AIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKS 228 (805)
T ss_pred EEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccC
Confidence 9987653 1221 1 24567888887 58999999999775544432
Q ss_pred C-cEEEE-EecCccccCC-CCCCCccceEEEeccccccccCCCCCC-ceEEEEEchhhhhcCCCceEeE-eecCC-CCcc
Q 002263 214 G-VKVVM-ATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGP-HAAFLATSQEYKRMMPGRIVGV-SIDSS-GKPA 287 (946)
Q Consensus 214 g-al~~v-~a~~~al~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP-~~g~l~~~~~~~~~lp~~~~G~-s~d~~-g~~~ 287 (946)
| ++++| ++| +++.+ .+..++|+|++++|++|| +||| |+|+|++++++.+.|.+.+.|+ +.+.. ....
T Consensus 229 g~~~v~vDaaQ--~~g~~piDv~~~~~Dfl~~S~HK~-----~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~ 301 (805)
T PLN02724 229 GRWMVLLDAAK--GCGTSPPDLSRYPADFVVVSFYKI-----FGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADID 301 (805)
T ss_pred cceEEEeehhh--hcCCCCCChhhcCCCEEEEeccee-----ccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccc
Confidence 3 56788 455 34433 255789999999999444 2334 5899999999988888877774 22100 0001
Q ss_pred eEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC------CEEEcCCC
Q 002263 288 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG------TVEVQGLP 361 (946)
Q Consensus 288 ~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g------~~~~~~~~ 361 (946)
|.. ...+.+.|+|.||.|+ .++.++.+++ .++...|+++|.+++..++++|.++|+++. ++++++..
T Consensus 302 ~~~--~~~~~~~rfE~GT~n~---~~i~~l~aal--~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~ 374 (805)
T PLN02724 302 FVK--RRERVEQRFEDGTISF---LSIAALRHGF--KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNH 374 (805)
T ss_pred eee--ccccHHHHhcCCCcch---hHHHHHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCC
Confidence 111 1112345789999999 4566677776 566666899999999999999999999873 37787532
Q ss_pred --------CcCeEEEecCC-------HHHHHHHHHHcCCeeee------------e------------------------
Q 002263 362 --------FFDTVKVKCAD-------AHAIASAAYKIEMNLRV------------V------------------------ 390 (946)
Q Consensus 362 --------~~~~~~i~~~~-------~~~v~~~L~~~GI~~~~------------~------------------------ 390 (946)
...+|+|++.+ ..++...+.++||.++. +
T Consensus 375 ~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~ 454 (805)
T PLN02724 375 TFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVI 454 (805)
T ss_pred CCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhhee
Confidence 34567776643 34455555677997641 1
Q ss_pred ---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 ---DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ---~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.||+|++.+||.+|||+|+++|..
T Consensus 455 ~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 455 HGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred cCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 127899999999999999999999974
No 50
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=9.6e-23 Score=232.90 Aligned_cols=346 Identities=16% Similarity=0.187 Sum_probs=237.0
Q ss_pred CCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC
Q 002263 35 GLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 114 (946)
Q Consensus 35 ~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~ 114 (946)
+.+|.|++++|+++++++..+..|+|..+.+ ..|.++ +.+.+ +... .+..+....+..+.+.++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~a~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~g~ 74 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYERILSSMCTE-PHPIAR-KAHEM---FLET-NLGDPGLFPGTAKLEEEAVEMLGELLHL 74 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHHeeeeeecC-chHHHH-HHHHH---HHhc-CCCCcccCccHHHHHHHHHHHHHHHhCC
Confidence 3689999999999999998876788877643 344443 23321 1111 1112222346777788999999999999
Q ss_pred CCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC
Q 002263 115 PMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG 184 (946)
Q Consensus 115 ~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~ 184 (946)
+..++.++++||.+...++.+.+ ...+++++|++++..|+++.+.++ ..|++++.++. ++|++ +++
T Consensus 75 ~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 150 (371)
T PRK13520 75 PDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAAD----MLGVELRRAPLDDDYRVDVKAVEDLIDD 150 (371)
T ss_pred CCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHH----HcCceEEEecCCCCCcCCHHHHHHHHhh
Confidence 87788888999877666554432 111257899999999999776643 45788887654 45666 777
Q ss_pred CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC---C-----CCCCccceEEEeccccccccCCCCC
Q 002263 185 DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---K-----PPGELGADIVVGSAQRFGVPMGYGG 255 (946)
Q Consensus 185 ~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l---~-----~~~~~GaDi~v~s~k~lg~P~~~GG 255 (946)
++++|++.++ |.+|.+.|+++|.++||++|++++|+. .++.+.+ . ....+|+|.+.+++++|+.+ |+
T Consensus 151 ~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a---~~ 226 (371)
T PRK13520 151 NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA-AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA---PI 226 (371)
T ss_pred CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe-cchhHHHHhhcCCCCccccCCCCceEEECCccccCc---cC
Confidence 7887776665 679999999999999999999999943 2222211 1 11246899999998666531 22
Q ss_pred CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHH
Q 002263 256 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 335 (946)
Q Consensus 256 P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 335 (946)
|..++++.++++.+.+... .+ |... .. + .-..||.+. ....++.+++ ..++.+|++++.
T Consensus 227 ~~G~~~~~~~~~~~~l~~~----------~~-~~~~--~~-~--~~~~gt~~~---~~~~~~~~al--~~l~~~g~~~~~ 285 (371)
T PRK13520 227 PAGGILFRDESYLDALAVD----------TP-YLTS--KK-Q--ATLTGTRSG---AGVAATYAVM--KYLGREGYRKVV 285 (371)
T ss_pred CceEEEEcCHHHHHhhccc----------Cc-cccC--CC-C--cceEeeccC---hHHHHHHHHH--hhhcHhHHHHHH
Confidence 3444555566676655310 00 1000 00 0 001244443 2333444443 677889999999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeeec-CCeEEEEeccCCCHHHHHHHHHH
Q 002263 336 QRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIV 414 (946)
Q Consensus 336 ~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~-~~~lris~~~~~t~edid~ll~~ 414 (946)
++..+++++|+++|+++| ++++..+..+.+.+..+.+.++.++|.++||.++... +..+|+|++.++|++|+++++++
T Consensus 286 ~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~ 364 (371)
T PRK13520 286 ERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLED 364 (371)
T ss_pred HHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHH
Confidence 999999999999999987 8844333345566766667899999999999987643 56799999999999999999999
Q ss_pred Hh
Q 002263 415 FA 416 (946)
Q Consensus 415 l~ 416 (946)
|+
T Consensus 365 l~ 366 (371)
T PRK13520 365 LK 366 (371)
T ss_pred HH
Confidence 86
No 51
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.92 E-value=3.8e-24 Score=242.32 Aligned_cols=330 Identities=19% Similarity=0.230 Sum_probs=209.8
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 527 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~ 527 (946)
.+| .++.+.+++++.+.+.........++..++|.-+...+ ......-....+.+-+.+.. +.++...+++.++.+
T Consensus 11 ~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~-~~~i~~~~l~~~~n~n~~~~-~~~P~~~~~E~~vi~ 86 (373)
T PF00282_consen 11 ELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPS-PASILADLLASALNQNGFTW-EASPAATEIEREVIR 86 (373)
T ss_dssp CHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--C-HHHHHHHHHHHHHT-BTTST-TTSHHHHHHHHHHHH
T ss_pred ccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCcc-HHHHHHHHHHhhhccccccc-ccccccccchHHHHH
Confidence 455 45678999999998765544333334445554221111 11111000011222223333 556778889999999
Q ss_pred HHHHhhCCCc--------ccccCCchHHHHHHHHHHHHHHHH----hcCC--CCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 528 WLCTITGFDS--------FSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 528 ~la~l~G~~~--------~~l~~~sGa~ge~a~l~a~r~y~~----~~G~--~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
|+++++|++. ..+.+++|+.+++.++++.|.... ..|. .++.+|++++.+|.+..+++.++|+.++
T Consensus 87 ~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~ 166 (373)
T PF00282_consen 87 WLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVR 166 (373)
T ss_dssp HHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEE
T ss_pred HHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEE
Confidence 9999999992 245667788888877787776432 2232 1345788899999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCC---eEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCC--
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-- 667 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~---t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p-- 667 (946)
.||++++|++|+++|+++|++...+ +.+|+.+.++ .+|.+| ||++|+++|+++++|+|||+|...+. +..|
T Consensus 167 ~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D-~l~~i~~i~~~~~~wlHVDaA~gg~~--~~~~~~ 243 (373)
T PF00282_consen 167 KIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID-PLEEIADICEKYNIWLHVDAAYGGSA--LLSPEY 243 (373)
T ss_dssp EE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--SHHHHHHHHHHCT-EEEEEETTGGGG--GGHCTT
T ss_pred EecCCcchhhhHHHhhhhhcccccccccceeeeccCCCccccccc-CHHHHhhhccccceeeeecccccccc--cccccc
Confidence 9999999999999999999764222 4477788886 489999 89999999999999999998743211 2222
Q ss_pred -----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCC--CCccccC-CCCCCCCCCCCCCCcccCccch
Q 002263 668 -----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLP--SHPVVST-GGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 668 -----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp--~~~v~~~-~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
+-.++|.++.|+||++..|+++| ++.++++ +...+. ...++.. .+.+ .........+.. +.
T Consensus 244 ~~~~~gi~~adSit~d~HK~l~~P~~~~-----~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~-~~~~~~~~tl~~---SR 314 (373)
T PF00282_consen 244 RHLLFGIERADSITIDPHKWLGVPYGCG-----VLLVRDKSDLRDAFSINADYLGNDDRESD-ESYDYGDYTLQG---SR 314 (373)
T ss_dssp GGGGTTGGGESEEEEETTTTTS-SSS-E-----EEEESSGGGHHGGGEEEETCTT-S-SSS--GGGCEEEGSSSS---SG
T ss_pred cccccccccccccccchhhhhcCCccce-----eEEeecccchHHHhccChhhhcccccccc-cccccccccccc---cc
Confidence 22368999999999999987664 7878763 222110 0011100 0000 000011112222 23
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEec
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDL 797 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~ 797 (946)
+..++..|+.|+.+|.+|+++..++.+++|++|+++|++. ++++. .+....++|++
T Consensus 315 ~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~----~~~~~~vcFr~ 372 (373)
T PF00282_consen 315 RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN----EPDLNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS----TTSSSEEEEEE
T ss_pred cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc----CCCceEEEEEe
Confidence 5567789999999999999999999999999999999986 45432 23344455653
No 52
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.91 E-value=4.5e-22 Score=228.35 Aligned_cols=289 Identities=17% Similarity=0.135 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHHHHHhCC-CCcceEEcccHHHHHHHHHHHhcc---ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 97 RLESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 97 ~l~~l~e~q~~la~L~g~-~~~~~sl~~~~Ta~~ea~~la~~~---~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
..+.+.+....+++.+|+ ++.++.+++|+|.++..++.++.+ .+.++++|+++..+||++...+.. ++..|++++
T Consensus 40 ~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~-~~~~G~~v~ 118 (382)
T TIGR03403 40 THPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF-LESLGVEVT 118 (382)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH-HHHCCCEEE
Confidence 355677777888888887 577899999998666655444311 111357899999999999998764 355899999
Q ss_pred Eeccc--------cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEE
Q 002263 173 VSDLK--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 241 (946)
Q Consensus 173 ~~~~~--------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v 241 (946)
.++++ ++++ +++++++|++++| |.+|.+.|+++|.++||++|++++||+ ..+.+.. .+..++|+|+++
T Consensus 119 ~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~-a~~~g~~~~~~~~~~~D~~~ 197 (382)
T TIGR03403 119 YLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDA-VQAIGKIPVDVQKAGVDFLS 197 (382)
T ss_pred EEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEec-hhhcCCCccCccccCCCEEE
Confidence 88653 3445 6778999999987 789999999999999999999999943 2344433 345679999999
Q ss_pred eccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 242 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 242 ~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
.|++||. |.||.|++++|+++ .+.+.+.|. .. ..+++.||.|+ .+++++.+++
T Consensus 198 ~s~~K~~-----gp~G~g~l~vr~~~--~~~p~~~g~------~~-----------~~~~~~gt~~~---~~~~al~~al 250 (382)
T TIGR03403 198 FSAHKFH-----GPKGVGGLYIRKGV--ELTPLFHGG------EH-----------MGGRRSGTLNV---PYIVAMGEAM 250 (382)
T ss_pred EcchhhC-----CCCceEEEEECCCC--CCCCcccCC------CC-----------CCCcccCCcCh---HHHHHHHHHH
Confidence 9995563 34568999999875 233333331 10 01234688888 4555665555
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--C-cCeEEEecCC--HHHHHHHHHHcCCeeee-------
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRV------- 389 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~-~~~~~i~~~~--~~~v~~~L~~~GI~~~~------- 389 (946)
.++ .++++.+.+++..+.++|+++|+++++++++++. . .+.+.|.+++ +.++.+.|.++||.++.
T Consensus 251 --~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~ 327 (382)
T TIGR03403 251 --RLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASE 327 (382)
T ss_pred --HHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCC
Confidence 222 3457888899999999999999988559887532 2 2345566664 77888889999998862
Q ss_pred ----------e------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 ----------V------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ----------~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ ..+.||+|++.+||++|||+++++|+.
T Consensus 328 ~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 328 DLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred CCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 1 125799999999999999999999974
No 53
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.91 E-value=7.7e-22 Score=231.18 Aligned_cols=377 Identities=16% Similarity=0.183 Sum_probs=236.9
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCccc---ccccccCccccccCCCCcccccccHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATT---EMMPVTWPSFANIHPFAPADQAQGYQEMFNN 524 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~---~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~e 524 (946)
.+| ..+.+..++++.+.+.-..+.....+..++|+-+.-++... ..+.. .++-+.+.. +.++...+++.+
T Consensus 61 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~l~~----~lN~n~~~~-~~spa~t~lE~~ 133 (522)
T TIGR03799 61 EIP--EQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPYFMLPLSKLMV----ALNQNLVKI-ETSKAFTPLERQ 133 (522)
T ss_pred CCC--CCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCchHHHHHHHHHH----HhcCCccee-ecCcchHHHHHH
Confidence 456 45678888888866543333222234556776333222221 11111 122222322 667788899999
Q ss_pred HHHHHHHhhCC------------C--cccccCCchHHHHHHHHHHHHHHHHh-c----CC-------------CCCCEEE
Q 002263 525 LGEWLCTITGF------------D--SFSLQPNAGAAGEYAGLMVIRAYHKA-R----GD-------------HHRNVCI 572 (946)
Q Consensus 525 l~~~la~l~G~------------~--~~~l~~~sGa~ge~a~l~a~r~y~~~-~----G~-------------~~~~~Il 572 (946)
+..|++++++. + ......++|+.+++.++.+.|..... . |. .++..|+
T Consensus 134 v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~ 213 (522)
T TIGR03799 134 VLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAIL 213 (522)
T ss_pred HHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEE
Confidence 99999999852 1 11344567787887777777764311 1 10 1345788
Q ss_pred EcCCCCCCCHHHHHHcCC---EEEEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cccccccCHHHHHHHHH
Q 002263 573 IPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIH 645 (946)
Q Consensus 573 i~~saHg~~~~~a~~~G~---~vv~v~~~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~ 645 (946)
+++.+|.++.+++.+.|+ +++.||+|++|++|+++|+++|++. +.++.+|+.+..+ .+|.++ |+++|+++|+
T Consensus 214 ~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD-pl~eIa~i~~ 292 (522)
T TIGR03799 214 VSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID-PLDEMADIAQ 292 (522)
T ss_pred ECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC-CHHHHHHHHH
Confidence 999999999999999998 8999999999999999999999642 2345566666665 489999 7999999999
Q ss_pred HcCCEEEEecccccccccccC------CCccCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCC--cccc--
Q 002263 646 DNGGQVYMDGANMNAQVGLTS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH--PVVS-- 714 (946)
Q Consensus 646 ~~g~ll~vD~a~~~a~~gl~~------pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~--~v~~-- 714 (946)
++|+|+|||+|+..+.. +.. .+..++|++++|.||||..|+| .|++++++ .+.+.+... ....
T Consensus 293 ~~g~~lHVDaA~gg~~~-~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~~~~~~~~~Yl~~~~ 366 (522)
T TIGR03799 293 ELGCHFHVDAAWGGATL-LSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALMSAIEHHAEYILRKG 366 (522)
T ss_pred HcCCeEEEEchhhhHHH-hCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHHHHhccCcchhcCCC
Confidence 99999999998642211 111 1224799999999999976654 56888875 332322211 0000
Q ss_pred CCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeee
Q 002263 715 TGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHE 792 (946)
Q Consensus 715 ~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e 792 (946)
..+.+ .. .+..+. ...+...|+.|+.+|.+|++++.++.+++++|+.+.|++. +++.. .+..+.
T Consensus 367 ~~d~~----~~---~legsR---~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~----~p~l~i 432 (522)
T TIGR03799 367 SKDLG----SH---TLEGSR---PGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT----EPELCL 432 (522)
T ss_pred CCccc----cc---eeecCc---chHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec----CCCccE
Confidence 01111 01 111111 2223468999999999999999999999999999999875 55542 134455
Q ss_pred EEEecccccccC-------------C--CC--HHHHHHHHHHCCccc-C-C-CC---CCC--CCEEEEEcC-CCCCHHHH
Q 002263 793 FIVDLRGLKNTA-------------G--IE--PEDVAKRLMDYGFHG-P-T-MS---WPV--PGTLMIEPT-ESESKEEL 846 (946)
Q Consensus 793 ~v~~~~~~~~~~-------------g--~~--~~~i~~~L~~~Gi~~-~-~-~~---~p~--~~~lri~~t-~~~t~~ei 846 (946)
++|+..+-.-.. + .+ ...|.+++.+.|... . + +. |.. .-.+|+++. ..+|+++|
T Consensus 433 v~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i 512 (522)
T TIGR03799 433 LTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEIL 512 (522)
T ss_pred EEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHH
Confidence 666643210000 0 00 135677777778652 1 1 11 110 135899884 56778888
Q ss_pred HHHHHH
Q 002263 847 DRYCDA 852 (946)
Q Consensus 847 d~~~~a 852 (946)
+.+++.
T Consensus 513 ~~~l~~ 518 (522)
T TIGR03799 513 QDILDE 518 (522)
T ss_pred HHHHHH
Confidence 887664
No 54
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.91 E-value=1.3e-21 Score=226.02 Aligned_cols=289 Identities=15% Similarity=0.129 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec
Q 002263 97 RLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 175 (946)
Q Consensus 97 ~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~-~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~ 175 (946)
..+.+.++++.+++++|+++.++.+++++|.+.+.++.++.. ..++|++|+++..+|+++...++.+ +..|++++.++
T Consensus 45 ~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~ 123 (402)
T TIGR02006 45 AEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLP 123 (402)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEc
Confidence 346788999999999999888899999999887776554421 1237899999999999999988654 35689988876
Q ss_pred c--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc
Q 002263 176 L--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA 244 (946)
Q Consensus 176 ~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~ 244 (946)
+ +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ ..+.+..+ +..++|+|++++++
T Consensus 124 ~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~-a~a~g~~~~~~~~~~~D~~~~s~ 202 (402)
T TIGR02006 124 PKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDA-AQSVGKIPINVNELKVDLMSISG 202 (402)
T ss_pred cCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEc-chhcCCcccCccccCCCEEEEeh
Confidence 5 34555 6778999999987 679999999999999999999999942 33555443 45678999999999
Q ss_pred ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHH
Q 002263 245 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 324 (946)
Q Consensus 245 k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~ 324 (946)
+|+.+| +|.|+++++++....+.+.+.| +.. ..+.+.||+|+ ..+.++.+++ .
T Consensus 203 ~K~~gp-----~G~G~l~~~~~~~~~~~~~~~g------~~~-----------~~~~~~gt~~~---~~~~al~~al--~ 255 (402)
T TIGR02006 203 HKIYGP-----KGIGALYVRRKPRVRLEALIHG------GGH-----------ERGMRSGTLPT---HQIVGMGEAF--R 255 (402)
T ss_pred hhhcCC-----CceEEEEEccCCCCCCCceecC------CCc-----------cCCccCCCccH---HHHHHHHHHH--H
Confidence 556333 4689999998765555443322 111 01346789888 4555665565 3
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCc-C--eEEEecCCHHHHHHHHHHcCCeee------e----
Q 002263 325 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFF-D--TVKVKCADAHAIASAAYKIEMNLR------V---- 389 (946)
Q Consensus 325 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~-~--~~~i~~~~~~~v~~~L~~~GI~~~------~---- 389 (946)
++ .++++++.++..+++++++++|+++.++++.++ ... . .|+|......++...|. ||.++ .
T Consensus 256 ~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l~--~i~v~~G~~c~~~~~~ 332 (402)
T TIGR02006 256 IA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLE 332 (402)
T ss_pred HH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhcC--CEEEechhhcCCCCCC
Confidence 33 347888999999999999999998844887642 122 2 24444222566666663 55432 0
Q ss_pred -------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 -------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 -------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...+.||+|++.+||++|+|+++++|..
T Consensus 333 ~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 333 PSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred ccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 0137899999999999999999999974
No 55
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=1.1e-22 Score=229.91 Aligned_cols=294 Identities=18% Similarity=0.230 Sum_probs=209.8
Q ss_pred cccccHHHHHHHHHHHHHHhhCCC-c--ccccCCchHHHHHHHHHHHHHHHHh----c--CCCCCCEEEEcCCCCCCCHH
Q 002263 513 DQAQGYQEMFNNLGEWLCTITGFD-S--FSLQPNAGAAGEYAGLMVIRAYHKA----R--GDHHRNVCIIPVSAHGTNPA 583 (946)
Q Consensus 513 e~~qG~~~~~~el~~~la~l~G~~-~--~~l~~~sGa~ge~a~l~a~r~y~~~----~--G~~~~~~Ili~~saHg~~~~ 583 (946)
+.+++..+++.++.+++++++|.+ . ..+++++|++++..++.+++..... . +.+.+.+|+++..+|.++..
T Consensus 31 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~ 110 (345)
T cd06450 31 DESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEK 110 (345)
T ss_pred ccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHH
Confidence 346778888999999999999986 2 2456677877776555555432111 0 01124578889999999888
Q ss_pred HHHHcCCEEEEEcCCCCCCCCHHHHHHHHHh---cCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccc
Q 002263 584 TAAMCGMKIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN 659 (946)
Q Consensus 584 ~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~---~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~ 659 (946)
++...|.+++.+++++++.+|+++|++++++ .+.++++|++++|+ .+|.++ |+++|+++|+++|+++|+|+|+..
T Consensus 111 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 111 AAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID-PLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-CHHHHHHHHHHhCCeEEEechhhH
Confidence 8888999999999988899999999999973 12278888889985 689998 799999999999999999998743
Q ss_pred ccccccCC-----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 660 AQVGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 660 a~~gl~~p-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
....+... +..++|++++++||+++.|+ |+|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-----g~g~~~~~---------------------------------- 230 (345)
T cd06450 190 FLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-----GCSAVLVR---------------------------------- 230 (345)
T ss_pred HHhhChhhHHHhcCccccCEEEEchhHhhCCCc-----chHHHHHH----------------------------------
Confidence 32211111 11378999999999986543 34444322
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
+...|+.+..++.+|+++..++..++++++.++|++...+...++ +..+.+.|.+.+-. ..+++..++.++
T Consensus 231 ------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~iv~f~~~~~~-~~~~~~~~i~~~ 301 (345)
T cd06450 231 ------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE--PNLSLVCFRLKPSV-KLDELNYDLSDR 301 (345)
T ss_pred ------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceeEEEEEECCcc-hhhHHHHHHHHH
Confidence 233577788899999999999999999999999987522211121 12233445543100 012456789999
Q ss_pred HHHCC-cccCCCCCCCCCEEEEEcCCC-CCHHHHHHHHHHHHH
Q 002263 815 LMDYG-FHGPTMSWPVPGTLMIEPTES-ESKEELDRYCDALIS 855 (946)
Q Consensus 815 L~~~G-i~~~~~~~p~~~~lri~~t~~-~t~~eid~~~~aL~~ 855 (946)
|.++| ++++...++..+.+|++++.. +|++|+|+|+++|++
T Consensus 302 L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 302 LNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99985 555433333357899999976 499999999999975
No 56
>PRK02948 cysteine desulfurase; Provisional
Probab=99.90 E-value=1.2e-21 Score=224.81 Aligned_cols=292 Identities=14% Similarity=0.093 Sum_probs=210.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~-~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
......+.+.++++.+|+++|.++.++.+++|+|.++..++.++.-. .+++++|+++..+||++...++. ++..|+++
T Consensus 37 ~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~-~~~~g~~v 115 (381)
T PRK02948 37 IGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQS-LESQGYTV 115 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHH-HHhCCCEE
Confidence 33445577889999999999998888988898897776655443210 12679999999999999988865 35578888
Q ss_pred EEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEE
Q 002263 172 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 240 (946)
Q Consensus 172 ~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~ 240 (946)
+.+++ +++++ +.+++++|++++| |.+|.+.|+++|+++||++|++++||+ .++++... +..++|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~-~~~~g~~~~~~~~~~~d~~ 194 (381)
T PRK02948 116 TEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDC-VQTFGKLPIDVFEMGIDSL 194 (381)
T ss_pred EEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEC-hhhccccccCcccCCCCEE
Confidence 88765 33555 6778999999998 689999999999999999999999953 44555432 3467899999
Q ss_pred EeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 241 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 241 v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
+.+++|+. |.||+|++++++++. +.....+ . .+..+++.+|.|+ .+..++.++
T Consensus 195 ~~s~~K~~-----gp~G~G~l~~~~~~~--~~~~~~~-------~----------~~~~~~~~~t~~~---~~~~a~~~a 247 (381)
T PRK02948 195 SVSAHKIY-----GPKGVGAVYINPQVR--WKPVFPG-------T----------THEKGFRPGTVNV---PGIAAFLTA 247 (381)
T ss_pred EecHHhcC-----CCCcEEEEEEcCCCC--CCCcccC-------C----------CCCCCcCCCCccH---HHHHHHHHH
Confidence 99984453 335689999987641 1110000 0 0112345678887 345555555
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc--C-CC-Cc-CeEEEecCC--HHHHHHHHHHcCCeeeee---
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--G-LP-FF-DTVKVKCAD--AHAIASAAYKIEMNLRVV--- 390 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~--~-~~-~~-~~~~i~~~~--~~~v~~~L~~~GI~~~~~--- 390 (946)
+ .++. ++++++.+++.++.++++++|+++| +++. + .. .. ..+.+..++ +.++...|.++||.++.-
T Consensus 248 l--~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c 323 (381)
T PRK02948 248 A--ENIL-KNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSAC 323 (381)
T ss_pred H--HHHH-HHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhc
Confidence 5 2222 4678889999999999999999987 6543 2 11 12 234455554 677888898899998631
Q ss_pred --------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 --------------------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 --------------------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+|+|++.+||++|+++++++|..
T Consensus 324 ~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 324 QVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred CCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 036899999999999999999999974
No 57
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.90 E-value=1.1e-21 Score=226.83 Aligned_cols=313 Identities=17% Similarity=0.172 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHhhCCC-ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEE
Q 002263 519 QEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI 592 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~-~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~v 592 (946)
.+.+.++++.+++++|.+ ... +..++++.+...+ ++.+... ...++++||++...|+++.. .+...|+++
T Consensus 61 ~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~---~~~~~~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~ 136 (403)
T TIGR01979 61 TEAYEAVREKVAKFINAASDEEIVFTRGTTESINLV---AYSWGDS-NLKAGDEIVISEMEHHANIVPWQLLAERTGATL 136 (403)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHH---HHHhhhh-cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEE
Confidence 346778999999999987 333 3344444443222 2221110 11256889999998887642 356789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+.++++++|.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....++|
T Consensus 137 ~~v~~~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~g~~~-~~~~~~~ 211 (403)
T TIGR01979 137 KFIPLDDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVN-PVEEIAKLAHQVGAKVLVDGAQAVPHMP-VDVQALD 211 (403)
T ss_pred EEEecCCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccC-CHHHHHHHHHHcCCEEEEEchhhcCccc-cCccccC
Confidence 999999889999999999996 789999999984 689998 7999999999999999999987432211 1224578
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC-CC----C-C-----CCCCCCCCCcccCccchhhH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI----P-A-----PEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~-d~----~-~-----~~~~~~~~~i~~~~~g~~~~ 740 (946)
+|++++++||+|+ .+|+|++++++++.+.++....+... +. . . +..+.++. +...
T Consensus 212 ~d~~~~s~~K~~g------p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~--------~~~~ 277 (403)
T TIGR01979 212 CDFYVFSGHKMYG------PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTP--------NIAG 277 (403)
T ss_pred CCEEEEecccccC------CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCc--------cHHH
Confidence 9999999999763 34689999998776666432222100 00 0 0 00011111 1222
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
++..++.+..+...|+.+..++...+++++.++|+++ +++..+..+....+.+.+.++ +.+..++.+.|.++
T Consensus 278 ~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~ 351 (403)
T TIGR01979 278 VIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE------GVHPHDVGTILDEE 351 (403)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC------CcCHHHHHHHHhhC
Confidence 3334555566656677777788888999999999875 333211111112233445543 35678899999999
Q ss_pred CcccCCCC---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 819 Gi~~~~~~---------~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
||.+.... +..++++||+++.++|++|+++|+++|+++++++
T Consensus 352 gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 352 GIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 99875311 1235789999999999999999999999887654
No 58
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=7.8e-22 Score=218.18 Aligned_cols=325 Identities=18% Similarity=0.233 Sum_probs=240.6
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceE-EcccHHHHHHHHHHHh
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNAS-LLDEGTAAAEAMAMCN 136 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~s-l~~~~Ta~~ea~~la~ 136 (946)
++..| |..+|+.+++.+. ++-. +-.. .--.+.+.+.++.+..+++.+...+. +..+||.++||++.++
T Consensus 8 Ll~PG--P~~v~~~V~~am~-~~~~----~h~s----~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl 76 (383)
T COG0075 8 LLTPG--PVPVPPRVLLAMA-RPMV----GHRS----PDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL 76 (383)
T ss_pred eeeCC--CCCCCHHHHHHhc-CCCC----CCCC----HHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc
Confidence 45677 6678899886655 3321 1122 33356677778889999998843344 5588999999988765
Q ss_pred ccccCCCCEEEEc-CCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cC--CCEeEEEEEcC-CCceeecch
Q 002263 137 NIQKGKKKTFIIA-SNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 203 (946)
Q Consensus 137 ~~~~~~gd~vvv~-~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~--~~t~~v~v~~p-n~~G~i~di 203 (946)
- . +||+|++. .+.|.....-+ ++++|.+++.++. +++++ ++ ++.+.|.++|. +++|.++|+
T Consensus 77 ~-~--pgdkVLv~~nG~FG~R~~~i---a~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl 150 (383)
T COG0075 77 V-E--PGDKVLVVVNGKFGERFAEI---AERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPL 150 (383)
T ss_pred c-C--CCCeEEEEeCChHHHHHHHH---HHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcH
Confidence 3 3 78998854 47887665554 5567888877654 56666 54 67889988876 789999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeec
Q 002263 204 GDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 281 (946)
Q Consensus 204 ~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d 281 (946)
++|+++++++|++++|++ ..|+|.. .++.+||+|+++.++ |.|+.| ||+|+++++++.++.+..+
T Consensus 151 ~~I~~~~k~~g~l~iVDa-VsS~Gg~~~~vd~wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~------- 217 (383)
T COG0075 151 KEIAKAAKEHGALLIVDA-VSSLGGEPLKVDEWGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEER------- 217 (383)
T ss_pred HHHHHHHHHcCCEEEEEe-cccCCCcccchhhcCccEEEecCchhccCC-----CccceeEECHHHHHHHhcC-------
Confidence 999999999999999965 4577765 367899999999999 778766 7899999999988887432
Q ss_pred CCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-
Q 002263 282 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL- 360 (946)
Q Consensus 282 ~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~- 360 (946)
..++|+++|....+...+...|+.....+.++|+..++ ..+-.+|++++.+|++.++++++++++++| ++++.+
T Consensus 218 --~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al--~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~ 292 (383)
T COG0075 218 --KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREAL--DLILEEGLEARIARHRRLAEALRAGLEALG-LELFADP 292 (383)
T ss_pred --CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCc
Confidence 12258898865544443335666666668899998887 777889999999999999999999999999 998752
Q ss_pred -CCcCeEE-EecCC---HHHHHHHHH-HcCCeeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 361 -PFFDTVK-VKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 361 -~~~~~~~-i~~~~---~~~v~~~L~-~~GI~~~~----~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...++++ +..+. ..++...+. ++|+.+.. +.+..+||..+=+-+.+|+...+.+|+.
T Consensus 293 ~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~ 359 (383)
T COG0075 293 ERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEA 359 (383)
T ss_pred ccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHH
Confidence 2344544 45553 334444555 45887743 3456899998888899999999999974
No 59
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=1.8e-21 Score=225.22 Aligned_cols=311 Identities=17% Similarity=0.193 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHhhCC-Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~-~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~ 591 (946)
..+.+.++++.+++++|. +... +.+++++++.. .+++.+... ...++++||++...|.++.. .++..|++
T Consensus 65 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~---~~~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 140 (406)
T PRK09295 65 ATEKMENVRKQAALFINARSAEELVFVRGTTEGIN---LVANSWGNS-NVRAGDNIIISEMEHHANIVPWQMLCARVGAE 140 (406)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH---HHHHHhhhh-cCCCcCEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 456788899999999997 4333 33444444443 223322100 11256899999988866532 35678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCcc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 670 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~ 670 (946)
++.++.++++.+|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++..+...+ ...++
T Consensus 141 v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~~~ 215 (406)
T PRK09295 141 LRVIPLNPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTEN-PLAEMIALAHQHGAKVLVDGAQAVMHHPV-DVQAL 215 (406)
T ss_pred EEEEecCCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccC-CHHHHHHHHHHcCCEEEEEcccccCcccc-Cchhc
Confidence 9999998889999999999996 78999999999 5799998 79999999999999999999875332221 22467
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC----CC--------CCCCCCCCCCCcccCccchh
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GI--------PAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~----d~--------~~~~~~~~~~~i~~~~~g~~ 738 (946)
|+|++++|+||.+ |.+|+|++++++++.+.+|....+... +. +.++.+.+|.++.
T Consensus 216 ~~D~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~------- 282 (406)
T PRK09295 216 DCDFYVFSGHKLY------GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTG------- 282 (406)
T ss_pred CCCEEEeehhhcc------CCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHH-------
Confidence 9999999999954 334689999998877666643322210 00 0011122222221
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
......+.+..+.+.|+.++.++...+++++.++|+++..+...++. ...+.+.|.++ +.+..++.++|.++
T Consensus 283 -~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-~~~~iv~~~~~------~~~~~~~~~~L~~~ 354 (406)
T PRK09295 283 -GIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-NRLGVIAFNLG------KHHAYDVGSFLDNY 354 (406)
T ss_pred -HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CCceEEEEEEC------CcCHHHHHHHHHhC
Confidence 22233445555555577777777778899999999875333221221 12233445443 35678899999999
Q ss_pred CcccCCCC---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 819 Gi~~~~~~---------~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
||.+..-. +..++.+|+|++.++|++|||+|+++|+++.+
T Consensus 355 gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 355 GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 99874321 11246899999999999999999999998743
No 60
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.90 E-value=2.8e-21 Score=223.05 Aligned_cols=312 Identities=16% Similarity=0.124 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHHhhCCC-ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH----HHHHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~-~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~----~~a~~~G~~ 591 (946)
..+.+.++++.+++++|.+ ... +..++++++...+ ++.+.. +...++++||++...|+++. ..++..|++
T Consensus 58 ~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~---~~~~~~-~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 58 LTARYELARQQVARFLNAPDAENIVWTRGTTESINLV---AQSYAR-PRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH---HHHhhh-ccCCCCCEEEECCcchhHHHHHHHHHHHHcCcE
Confidence 3456788999999999985 333 3344555554333 333211 11135689999999887653 236788999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCcc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 670 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~ 670 (946)
++.+|++.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++...... ....++
T Consensus 134 v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~-~~~~~~ 208 (398)
T TIGR03392 134 VVKLPIGADLLPDIRQLPELLT---PRTRILALGQMSNVTGGCP-DLARAITLAHQYGAVVVVDGAQGVVHGP-PDVQAL 208 (398)
T ss_pred EEEEecCCCCCcCHHHHHHHhc---cCceEEEEECccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCCC-CChhhc
Confidence 9999998888899999999996 789999999984 799998 7999999999999999999987422211 122356
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC----CC---C----CCCCCCCCCCcccCccchhh
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GI---P----APEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~----d~---~----~~~~~~~~~~i~~~~~g~~~ 739 (946)
++|++++|+||.|+ .+|+|++++++++.+.++....+... ++ . .++.+.+|.++.
T Consensus 209 ~~d~~~~s~~K~~g------p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~-------- 274 (398)
T TIGR03392 209 DIDFYAFSGHKLYG------PTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIA-------- 274 (398)
T ss_pred CCCEEEEecccccC------CCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHH--------
Confidence 89999999999653 34689999998776666432211100 00 0 001122222221
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
..+...+.+..+...|+.++.++...+++++.+.|+++..+...+... ...+.+.++ +.+..++.++|.++|
T Consensus 275 ~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~--~~i~~~~~~------~~~~~~l~~~L~~~g 346 (398)
T TIGR03392 275 GVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPG--SSLLAFDFA------GVHHSDLAALLAESG 346 (398)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--CcEEEEEeC------CcCHHHHHHHHHhCC
Confidence 122233344444455666777777788999999998753332112111 112344443 467789999999999
Q ss_pred cccCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 820 i~~~~~~~---------p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
|.+..... ...+.+|+++..++|++|+|+|+++|+++++++
T Consensus 347 I~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 347 IALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 98753221 124789999999999999999999999987653
No 61
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=3.2e-21 Score=220.54 Aligned_cols=310 Identities=21% Similarity=0.219 Sum_probs=210.1
Q ss_pred cHHHHHHHHHHHHHHhhCCC-ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCC
Q 002263 517 GYQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGM 590 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~-~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~ 590 (946)
...+.+.++++.+++++|.+ ... +.+++++.+. .++++.+... ..++++||++...|+++.. .++..|+
T Consensus 40 ~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~---~~~~~~l~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 114 (373)
T cd06453 40 RATDAYEAAREKVARFINAPSPDEIIFTRNTTEAI---NLVAYGLGRA--NKPGDEIVTSVMEHHSNIVPWQQLAERTGA 114 (373)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHH---HHHHHHhhhc--CCCCCEEEECcchhHHHHHHHHHHHhhcCc
Confidence 34566778999999999987 333 3444555443 3333433221 0145789999888877532 3457899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCC
Q 002263 591 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPG 668 (946)
Q Consensus 591 ~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg 668 (946)
+++.++++.++.+|+++++++++ +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++.. +.+. ...
T Consensus 115 ~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~li~D~a~~~--~~~~~~~~ 188 (373)
T cd06453 115 KLKVVPVDDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTIN-PVKEIGEIAHEAGVPVLVDGAQSA--GHMPVDVQ 188 (373)
T ss_pred EEEEeecCCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcC-CHHHHHHHHHHcCCEEEEEhhhhc--Cceeeecc
Confidence 99999998889999999999997 689999999984 689998 799999999999999999998642 2221 224
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccC--CCCCCCCCCCCC--CCc-ccCccchhhHHHH
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST--GGIPAPEKSQPL--GTI-AAAPWGSALILPI 743 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~--~d~~~~~~~~~~--~~i-~~~~~g~~~~~~~ 743 (946)
++|+|++++++||+|+ ++|+|++++++++.+.+.....+.. ............ ... .+++ +...+.+
T Consensus 189 ~~~~d~~~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~a 260 (373)
T cd06453 189 DLGCDFLAFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTP--NIAGAIG 260 (373)
T ss_pred ccCCCEEEeccccccC------CCCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCC--CHHHHHH
Confidence 5799999999999984 3778999999877666543221110 000000000000 000 0011 1222334
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
.++.+..+..+|+.++.++...+++++.+.|+++ +++.. .+ ....+.+.+.++ +.+..++.++|.++||.
T Consensus 261 l~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~-~~~~~~~~~~~~------~~~~~~i~~~l~~~gi~ 332 (373)
T cd06453 261 LGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG-DA-EDRAGVVSFNLE------GIHPHDVATILDQYGIA 332 (373)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-Cc-cccCCeEEEEEC------CcCHHHHHHHHHHCCEE
Confidence 5666778888888888888889999999999875 33321 11 112233455543 35778999999999998
Q ss_pred cCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 822 GPTMSW---------PVPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 822 ~~~~~~---------p~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
+..... ..++++|++++..+|++|+|+|+++|
T Consensus 333 i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 333 VRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred eccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 643221 12578999999999999999999875
No 62
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.89 E-value=4.6e-21 Score=221.48 Aligned_cols=312 Identities=15% Similarity=0.128 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHHHhhCC-Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH----HHHHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~-~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~----~~a~~~G~~ 591 (946)
..+.+.++++.+++++|. +... +..++++++...+ ++.+.. +...++++||+++..|+++. ..++..|++
T Consensus 61 ~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~---~~~~~~-~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 136 (401)
T PRK10874 61 LTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLV---AQSYAR-PRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAK 136 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHH---HHHhhh-ccCCCcCEEEECCcchHHHHHHHHHHHHHhCCE
Confidence 456788999999999998 4433 3345555554333 333311 11135689999998887653 235678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCcc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 670 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~ 670 (946)
++.++.+.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ....+
T Consensus 137 v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~l~~~~g~~~ivD~a~~~g~~~~-~~~~~ 211 (401)
T PRK10874 137 VVKLPLGADRLPDVDLLPELIT---PRTRILALGQMSNVTGGCP-DLARAITLAHQAGMVVMVDGAQGAVHFPA-DVQAL 211 (401)
T ss_pred EEEEecCCCCcCCHHHHHHhcC---cCcEEEEEeCCcccccCcC-CHHHHHHHHHHcCCEEEEECCcccccccC-Cchhc
Confidence 9999998888999999999996 789999999985 699998 79999999999999999999874322211 22457
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccC----CCCC-------CCCCCCCCCCcccCccchhh
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST----GGIP-------APEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~----~d~~-------~~~~~~~~~~i~~~~~g~~~ 739 (946)
++|++++++||.| |.+|+|++++++++.+.++....+.. .++. .+..+.++.++.
T Consensus 212 ~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~-------- 277 (401)
T PRK10874 212 DIDFYAFSGHKLY------GPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVA-------- 277 (401)
T ss_pred CCCEEEEeccccc------CCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHH--------
Confidence 8999999999965 33578999999887766643221110 0000 000111222221
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
...+..+.+..+...|+.+..++...+++++.++|+++..+...++... ..+.++++ +.+..++.+.|.++|
T Consensus 278 ~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~--~i~~~~~~------~~~~~~~~~~L~~~g 349 (401)
T PRK10874 278 GVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDS--SLLAFDFA------GVHHSDLVTLLAEYG 349 (401)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC--cEEEEEEC------CcCHHHHHHHHHHCC
Confidence 1222233344455556666667777889999999987533321111111 12344543 456789999999999
Q ss_pred cccCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 820 i~~~~~~~---------p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
|.+..... ...+.+||++...+|++|||+|+++|+++++.+
T Consensus 350 I~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 350 IALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred cEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 98754221 124789999999999999999999999887653
No 63
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.89 E-value=2e-21 Score=224.01 Aligned_cols=323 Identities=14% Similarity=0.094 Sum_probs=228.4
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHh
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~ 136 (946)
+.+.| |..+|+.+.+.+.. + ...+ .+.+..+.+.+.++.+++++|.+.. .+.+..++|+++++++..+
T Consensus 12 l~~pG--P~~~~~~V~~a~~~-~--~~~~------~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPG--PVNIPERVLRAMNR-P--NEDH------RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCC--CCCCCHHHHHHhcC-C--CCCC------CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc
Confidence 45667 66788888766543 2 1221 1345567788899999999999764 4556678888777766544
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC----CEeEEEEEcC-CCceeecc
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG----DVCGVLVQYP-GTEGEVLD 202 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~----~t~~v~v~~p-n~~G~i~d 202 (946)
+. +||+|++++..|++.. |...++..|++++.++. +++++ +++ ++++|+++++ |.+|.+.|
T Consensus 81 -~~--~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 81 -LS--PGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred -CC--CCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 33 8999999999898764 33445667888888754 23444 543 7899998886 78999999
Q ss_pred hHHHHHH--HHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeE
Q 002263 203 YGDFIKN--AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 278 (946)
Q Consensus 203 i~~i~~~--a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~ 278 (946)
+++|+++ ||++|++++||+ ..+++.++ +..+||+|++++++ |+|++| ||+||+++++++++++...-
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~-v~s~g~~~id~~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~--- 226 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDG-VSSIGALDFRMDEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAK--- 226 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEc-ccccCCccccccccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCC---
Confidence 9999999 999999999943 34555543 45789999999999 667554 46899999998877763210
Q ss_pred eecCCCCcceEEeccccc---ccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCE
Q 002263 279 SIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 355 (946)
Q Consensus 279 s~d~~g~~~~~l~l~tre---~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 355 (946)
...+.+.+.... ..-.+...|+|+ ..++++.+++ .++..+|++++.+++.++++++++.|+++| +
T Consensus 227 ------~~~~~~~~~~~~~~~~~g~~~~~Tp~~---~~~~al~~al--~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~ 294 (401)
T PLN02409 227 ------SPRVFFDWADYLKFYKLGTYWPYTPSI---QLLYGLRAAL--DLIFEEGLENVIARHARLGEATRLAVEAWG-L 294 (401)
T ss_pred ------CCCeecCHHHHHHHHhcCCCCCCCccH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 000111110000 000122345665 5677777776 666678999999999999999999999988 8
Q ss_pred EEcCC---CCcCeE-EEecC-C--HHHHHHHHH-HcCCeeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 356 EVQGL---PFFDTV-KVKCA-D--AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 356 ~~~~~---~~~~~~-~i~~~-~--~~~v~~~L~-~~GI~~~~----~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+++.+ ....++ .+..+ + +.++.+.|. ++||.+.. ..+..+||+.+-+++.+|+.+++.+|+.
T Consensus 295 ~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 295 KLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEM 368 (401)
T ss_pred eeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 88752 123333 35554 2 678888876 56998753 2357899999999999999999999974
No 64
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=6.1e-21 Score=221.99 Aligned_cols=314 Identities=16% Similarity=0.151 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHHhhCCCc-cc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEE
Q 002263 520 EMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIV 593 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~-~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv 593 (946)
+.+.++++.+++++|.+. .. +..++++++.. ++++.+... ...++++||++...|+++.. .++..|++++
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~---~i~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~ 151 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAIN---LVAYTWGLA-NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK 151 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHH---HHHHHhhhh-cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEE
Confidence 457789999999999853 23 33444444432 223322100 11256789999888876543 2567899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 672 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga 672 (946)
.++++.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+
T Consensus 152 ~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~a~~~g~~~~-~~~~~~~ 226 (424)
T PLN02855 152 FVGLTPDEVLDVEQLKELLS---EKTKLVATHHVSNVLGSIL-PVEDIVHWAHAVGAKVLVDACQSVPHMPV-DVQTLGA 226 (424)
T ss_pred EEecCCCCCcCHHHHHHHhc---cCceEEEEeCccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCcCC-CchhcCC
Confidence 99998888899999999996 689999999984 699998 79999999999999999999875333222 2345789
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC------CCC-----CCCCCCCCCCcccCccchhhHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG------GIP-----APEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~------d~~-----~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
|++++++||.+ |.+|+|++++++++.+.++....|... +.. ..+.+.+|.++ ...
T Consensus 227 d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~--------~~~ 292 (424)
T PLN02855 227 DFLVASSHKMC------GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAI--------GEA 292 (424)
T ss_pred CEEEeeccccc------CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHH--------HHH
Confidence 99999999943 335789999998877766543322211 000 00011222222 122
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC----ceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG----TVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~----~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
+...+.+..+...|+.++.++....++++.++|+++..+..-++.. ...+.+.|.++ +++..++.++|.+
T Consensus 293 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~------~~~~~~v~~~L~~ 366 (424)
T PLN02855 293 IGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE------GIHPTDLSTFLDQ 366 (424)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEEC------CcCHHHHHHHhcc
Confidence 2334445555566788888888889999999998753321112111 12223445543 4577899999987
Q ss_pred C-CcccCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 818 Y-GFHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 818 ~-Gi~~~~~~~---------p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+ ||.+....+ ...+.+||+++.++|.+|||+|+++|++++...+.
T Consensus 367 ~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 367 QHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred cCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7 998653211 12468999999999999999999999999877654
No 65
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.89 E-value=3.4e-21 Score=220.24 Aligned_cols=297 Identities=12% Similarity=0.017 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHHHHHhCCCC-cceEEcc-cHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCe-EEEE
Q 002263 97 RLESLLNFQTMIADLTGLPM-SNASLLD-EGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI-KVVV 173 (946)
Q Consensus 97 ~l~~l~e~q~~la~L~g~~~-~~~sl~~-~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi-~v~~ 173 (946)
..+.+.+.++.+++++|++. .++.++. ++|.++++++.++ +. +++.+++...+|++....+ .++..|+ +++.
T Consensus 46 f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-~~--~~~~~vi~~g~f~~~~~~~--~~~~~g~~~v~~ 120 (378)
T PRK03080 46 VKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-LG--ARRVDHLAWESFGSKWATD--VVKQLKLEDPRV 120 (378)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-CC--CCcceEEEeCHHHHHHHHH--HHhhcCCCCceE
Confidence 35788899999999999854 4688776 8999999887766 32 3333444468999865431 1345677 7777
Q ss_pred eccc-----cccccCCCEeEEEEEc-CCCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-c
Q 002263 174 SDLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-Q 245 (946)
Q Consensus 174 ~~~~-----~l~~i~~~t~~v~v~~-pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k 245 (946)
++.+ ++++++. ++.|.+++ .|.+|.+.|+++|++ |++|++++||+ ..++|..+ +..+ +|++++++ |
T Consensus 121 ~~~~~g~~~d~~~i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa-~qs~G~~pidv~~--iD~~~~s~~K 194 (378)
T PRK03080 121 LEADYGSLPDLSAVDF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDA-TSAAFALPLDWSK--LDVYTFSWQK 194 (378)
T ss_pred eccCCCCCCCHhhcCC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEec-ccccccCCCCHHH--CcEEEEehhh
Confidence 6543 1222333 55677776 578999999999999 89999999943 34666553 3333 79999999 6
Q ss_pred cccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccc--ccccccccccCCCccchHHHHHHHHHHHH
Q 002263 246 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT--REQHIRRDKATSNICTAQALLANMAAMYA 323 (946)
Q Consensus 246 ~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~t--re~~irre~aTsni~t~~~l~a~~aa~y~ 323 (946)
+|++| ||+||+++++++++++.+...|+.. + +.+++.. .....+++.+|.|.....+++++.+++
T Consensus 195 ~l~~P-----~G~g~l~v~~~~~~~~~p~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al-- 261 (378)
T PRK03080 195 VLGGE-----GGHGMAILSPRAVERLESYTPARPI-----P-KFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQL-- 261 (378)
T ss_pred hCCCC-----CceEEEEECHHHHHhhhcccCCCCC-----c-hhheeccchHHhhhhhcCCcccCchHHHHHHHHHHH--
Confidence 56444 5799999999999888766555321 1 1222211 111124566787776667777777776
Q ss_pred HHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--C-CCc-CeEEEecCC-----HHHHHHHHHHcCCeeee--e-
Q 002263 324 VYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG--L-PFF-DTVKVKCAD-----AHAIASAAYKIEMNLRV--V- 390 (946)
Q Consensus 324 ~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~-~~~-~~~~i~~~~-----~~~v~~~L~~~GI~~~~--~- 390 (946)
.++..+ |++++.+|+.+++++++++|+++|+++++. + ... ..++|+.++ ..++...|.++||.++. .
T Consensus 262 ~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~ 341 (378)
T PRK03080 262 DWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYR 341 (378)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeecccccc
Confidence 666676 899999999999999999999996567763 1 122 246666653 34567777777887753 1
Q ss_pred -cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+|+|++.+||++||++++++|+.
T Consensus 342 ~~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 342 DAPNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred CCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 247899999999999999999999974
No 66
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=4.6e-21 Score=217.86 Aligned_cols=311 Identities=15% Similarity=0.149 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCC--HHHHHHcCCEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~--~~~a~~~G~~vv 593 (946)
..+...++++.+++++|.+. ..+.+++|+++... +++.+. .++++|+++...|.++ ...+.+.|.+++
T Consensus 30 ~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~---~~~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~ 101 (356)
T cd06451 30 FLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEA---ALSNLL-----EPGDKVLVGVNGVFGDRWADMAERYGADVD 101 (356)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHH---HHHHhC-----CCCCEEEEecCCchhHHHHHHHHHhCCCeE
Confidence 45678899999999999853 23456666655433 333331 2457899887666553 345778999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIG 671 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~G 671 (946)
.+|.++++.+|++++++++++ .++++|++++|+ .+|.+. |+++|+++||++|+++++|+++. ++.. .....+|
T Consensus 102 ~v~~~~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~-~~~~i~~~a~~~~~~li~D~~~~--~g~~~~~~~~~~ 176 (356)
T cd06451 102 VVEKPWGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLN-PLEGIGALAKKHDALLIVDAVSS--LGGEPFRMDEWG 176 (356)
T ss_pred EeecCCCCCCCHHHHHHHHhc--cCCCEEEEeccCCCccccc-CHHHHHHHHHhcCCEEEEeeehh--ccCccccccccC
Confidence 999988889999999999972 278899999984 689988 79999999999999999999864 3322 2345678
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC--CccccCCCC----CCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGGI----PAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~--~~v~~~~d~----~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
+|++++++||||+.| +|+|++++++++.+.+.. ...++..+. ..++...... .+. +......+.
T Consensus 177 ~d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~t~---~~~~~~a~~ 246 (356)
T cd06451 177 VDVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYP--HTP---PVNLLYALR 246 (356)
T ss_pred ccEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCC--CCC---hHHHHHHHH
Confidence 999999999999643 468899998876654421 111110000 0000000011 111 112223344
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-CcccC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHGP 823 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi~~~ 823 (946)
+.+..+..+|+.+..++...+++++.+.|++. +++..+ +.......+.+.++ .+.+..+++++|.++ ||.+.
T Consensus 247 aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~~gI~~~ 320 (356)
T cd06451 247 EALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAK-PELRSPTVTAVLVP-----EGVDGDEVVRRLMKRYNIEIA 320 (356)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccC-cccCCCceEEEECC-----CCCCHHHHHHHHHHhCCEEEe
Confidence 55666667788888888889999999999874 444321 11111111223333 246788999999998 99864
Q ss_pred CCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 824 TMSWP-VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 824 ~~~~p-~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
....+ .++++|++++..+|++||++|+++|++++
T Consensus 321 ~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 321 GGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred cccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 32222 35799999999999999999999998865
No 67
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.89 E-value=5.1e-21 Score=220.81 Aligned_cols=310 Identities=18% Similarity=0.203 Sum_probs=205.1
Q ss_pred ccHHHHHHHHHHHHHHhhCCCccccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCC
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGM 590 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~ 590 (946)
++..+.+.++++.+++++|.+...+. .++++++.. ++++.+... .+++++||++...|.++.. .++..|+
T Consensus 56 ~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~---~~~~~~~~~--~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 130 (397)
T TIGR01976 56 RRADQVVDDAREAVADLLNADPPEVVFGANATSLTF---LLSRAISRR--WGPGDEVIVTRLDHEANISPWLQAAERAGA 130 (397)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH---HHHHHHHhc--CCCCCEEEEcCCchHhHHHHHHHHHHhcCC
Confidence 45567788999999999998753333 334443332 222222110 1356899999988877643 3567899
Q ss_pred EEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC
Q 002263 591 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 591 ~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg 668 (946)
+++.++.++ ++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+.. .....
T Consensus 131 ~~~~~~~~~~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~-~~~~~ 205 (397)
T TIGR01976 131 KVKWARVDEATGELHPDDLASLLS---PRTRLVAVTAASNTLGSIV-DLAAITELVHAAGALVVVDAVHYAPHG-LIDVQ 205 (397)
T ss_pred EEEEEeccccCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCccC-CHHHHHHHHHHcCCEEEEehhhhcccc-CCCHH
Confidence 999999876 68999999999996 789999999994 699998 799999999999999999998753221 12334
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
++|+|++++++||+| ||++|++++++++...+......+.........+.++.++ .....+..|..++
T Consensus 206 ~~~~d~~~~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~-----~~~~~l~~al~~~ 273 (397)
T TIGR01976 206 ATGADFLTCSAYKFF-------GPHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQY-----ELLAGVVAAVDYL 273 (397)
T ss_pred HcCCCEEEEechhhc-------CCceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCH-----HHHHHHHHHHHHH
Confidence 679999999999987 3668999999876655532211110000000012222222 1222233455555
Q ss_pred HHHcHh-----------hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 749 AMMGSK-----------GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 749 ~~lG~e-----------Gl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
...|.+ ++++..++..++++++.++|++. +++..+.......+.+.+.+. +.+..++.++|
T Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~L 347 (397)
T TIGR01976 274 AGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH------GLPPQRVVRRL 347 (397)
T ss_pred HHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC------CcCHHHHHHHH
Confidence 555521 35556667778889999999874 333211000112233444432 35678999999
Q ss_pred HHCCcccCCCCC-----------C-CCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 816 MDYGFHGPTMSW-----------P-VPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 816 ~~~Gi~~~~~~~-----------p-~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
.++||.+....+ + ..+.+||+++..+|++|+|+|+++|
T Consensus 348 ~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 348 ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 999999764311 1 2368999999999999999999875
No 68
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=2.4e-20 Score=213.35 Aligned_cols=342 Identities=15% Similarity=0.193 Sum_probs=225.2
Q ss_pred CHHHHHHHHHHHHhcCCcc---eeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhC
Q 002263 37 TESQMIEHMQKLASMNKVY---KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG 113 (946)
Q Consensus 37 se~e~~~~~~~l~~~n~~~---~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g 113 (946)
||.|++..+.++-+....+ +.++..+..+ .|.+.. .+.. ++..+ ...+....|..+...++++.+|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-a~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~g 73 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNP--HPIAVK-AYDM---FIETN-LGDPGLFPGTKKIEEEVVGSLGNLLH 73 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCc--hHHHHH-HHHH---HhhcC-CCCcccCccHHHHHHHHHHHHHHHhC
Confidence 6899999999986665443 2234444433 444332 2221 11111 11111223556777889999999999
Q ss_pred CCCcceEEcccHHHHHHHHHHHhcc---ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-
Q 002263 114 LPMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 181 (946)
Q Consensus 114 ~~~~~~sl~~~~Ta~~ea~~la~~~---~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~- 181 (946)
++.+++.++.++|.+...++.++.. ..++|++|++++..|+++...++ ..|++++.++. +++++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~----~~G~~~~~v~~~~~~~~d~~~l~~~ 149 (373)
T TIGR03812 74 LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAE----MLGLELRYAPLDEDYTVDVKDVEDL 149 (373)
T ss_pred CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHH----HcCCeEEEEeeCCCCCcCHHHHHHH
Confidence 9988888899988766554443321 11256899999999998776643 46888887754 34555
Q ss_pred cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC----------C-CCCCccceEEEeccccccc
Q 002263 182 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL----------K-PPGELGADIVVGSAQRFGV 249 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l----------~-~~~~~GaDi~v~s~k~lg~ 249 (946)
+++++..+++..| |.+|.+.|+++|+++||++|++++|+. .++.+.+ . +....|+|++.+++++|+.
T Consensus 150 l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~-a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~ 228 (373)
T TIGR03812 150 IDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDA-AFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGL 228 (373)
T ss_pred HhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEc-CchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCC
Confidence 6666655544444 679999999999999999999999943 2221111 0 1123589999999855643
Q ss_pred -cCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhCh
Q 002263 250 -PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 328 (946)
Q Consensus 250 -P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~ 328 (946)
|. |..|+++.++++.+.+... .+ |.. . .+ + ....||.|.. ...++.++ +.+++.
T Consensus 229 ~~~----~~G~~~~~~~~~~~~l~~~----------~~-~~~-~-~~-~--~~~~gt~~~~---~~~~~~~~--l~~l~~ 283 (373)
T TIGR03812 229 SPI----PAGGILFRSKSYLKYLSVD----------AP-YLT-V-KK-Q--ATITGTRSGA---SAAATYAV--IKYLGR 283 (373)
T ss_pred CcC----CceEEEEeCHHHHhhhccc----------Cc-ccC-C-CC-C--cceEeechhH---HHHHHHHH--HHHhCH
Confidence 32 3445666777777665210 00 100 0 00 0 0112444442 23333334 477889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeee-cCCeEEEEeccCCCHHH
Q 002263 329 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-DSNTVTASFDETTTLED 407 (946)
Q Consensus 329 ~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~-~~~~lris~~~~~t~ed 407 (946)
+|++++.+++.+++++|+++|+++| ++.+..+..+.+.+..++..++.++|.++||.++.. .+..+|+|++.++|++|
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~ed 362 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKIG-FEPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREH 362 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-CeEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHH
Confidence 9999999999999999999999997 654433445566777666678999999999998764 35789999999999999
Q ss_pred HHHHHHHHh
Q 002263 408 VDKLFIVFA 416 (946)
Q Consensus 408 id~ll~~l~ 416 (946)
+++++++|.
T Consensus 363 id~l~~~L~ 371 (373)
T TIGR03812 363 IEEFLEDLK 371 (373)
T ss_pred HHHHHHHHh
Confidence 999999986
No 69
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=2.4e-20 Score=213.82 Aligned_cols=309 Identities=16% Similarity=0.186 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH---HHHcCCEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~---a~~~G~~vv 593 (946)
..+.+.++++++++++|.+... +..++|++|...++.++..+ . .++++|+++...|+++... ++..|++++
T Consensus 40 ~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~--~---~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~ 114 (379)
T TIGR03402 40 VGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA--Q---PEKRHIITTAVEHPAVLSLCQHLEKQGYKVT 114 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh--c---CCCCeEEEcccccHHHHHHHHHHHHcCCEEE
Confidence 3566889999999999987533 44455666654444433211 1 1347888888888776544 334699999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 672 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga 672 (946)
.+|.+++|.+|+++++++++ +++++++++++ |.+|.+. |+++|+++||++|+++++|+++..+... ....++|+
T Consensus 115 ~v~~~~~g~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~~~~~g~~~-~~~~~~~~ 189 (379)
T TIGR03402 115 YLPVDEEGRLDLEELRAAIT---DDTALVSVMWANNETGTIF-PIEEIGEIAKERGALFHTDAVQAVGKIP-IDLKEMNI 189 (379)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEEcccCCeeecc-cHHHHHHHHHHcCCEEEEECcccccccc-cCcccCCC
Confidence 99998889999999999996 78899999988 4789998 7999999999999999999987532211 12345799
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
|++++++|| +. |.+|+|++++++... ..|. ..+... ....+.++.++. . +....+.+..+
T Consensus 190 D~~~~s~~K-~~-----gp~G~g~l~v~~~~~-~~p~-~~g~~~---~~~~~~gt~~~~-------~-~~~l~~al~~~- 249 (379)
T TIGR03402 190 DMLSLSGHK-LH-----GPKGVGALYIRKGTR-FRPL-LRGGHQ---ERGRRAGTENVP-------G-IVGLGKAAELA- 249 (379)
T ss_pred CEEEEcHHH-cC-----CCCceEEEEECCCCC-CCCc-ccCCcc---CCCcCCCCccHH-------H-HHHHHHHHHHH-
Confidence 999999999 52 335789999987642 2221 111100 001112222221 1 11111222222
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC----
Q 002263 753 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS---- 826 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~-~~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~---- 826 (946)
.+++.+..++...+++++.++|++ +..+...++.. ...+.+.+.++ +.+..++.+.|.++||.+..-.
T Consensus 250 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~~ 323 (379)
T TIGR03402 250 TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE------YIEGEAILLLLDMEGICASSGSACTS 323 (379)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec------CCCHHHHHHhhccCCEEEEchhhcCC
Confidence 334556566677788899998875 43332223211 11112333333 3577899999999999864211
Q ss_pred -------------CC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 -------------WP---VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 -------------~p---~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.+ ..+.+|+++...+|++|||++++.|+++++++++
T Consensus 324 ~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 324 GSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred CCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00 1378999999999999999999999998877553
No 70
>PRK02769 histidine decarboxylase; Provisional
Probab=99.88 E-value=2e-20 Score=212.34 Aligned_cols=280 Identities=18% Similarity=0.136 Sum_probs=200.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcc--eEEcccHHHHHHHHHHHhccc--cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 96 GRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQ--KGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~~~--~sl~~~~Ta~~ea~~la~~~~--~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
++.+...+..+++|+|+|+++.+ ..+++|||.+ .++++... +.++++|++++.+|+|+.+.++.+ |++.
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTea---n~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l----g~~~ 134 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEG---NLYGCYLARELFPDGTLYYSKDTHYSVSKIARLL----RIKS 134 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHH---HHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHc----CCCC
Confidence 46778889999999999997654 4788888844 44443211 126789999999999999998653 3333
Q ss_pred EEe--------ccccccc-cCCC---EeEEEEEcC-CCceeecchHHHHHHHHhCC---cEEEEEecCccccCCC-----
Q 002263 172 VVS--------DLKDIDY-KSGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANG---VKVVMATDLLALTILK----- 230 (946)
Q Consensus 172 ~~~--------~~~~l~~-i~~~---t~~v~v~~p-n~~G~i~di~~i~~~a~~~g---al~~v~a~~~al~~l~----- 230 (946)
+.+ |+++|++ ++++ |++|+++++ |.+|.++|+++|+++||++| ++++|++ .++.+.++
T Consensus 135 ~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDa-A~gg~~~p~~~~~ 213 (380)
T PRK02769 135 RVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA-ALSGMILPFVNNP 213 (380)
T ss_pred ceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEe-cccceeecccCcc
Confidence 333 3345666 6555 889999987 56999999999999999998 6999944 22333331
Q ss_pred --CCCCccceEEEeccccc-cccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 231 --PPGELGADIVVGSAQRF-GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 231 --~~~~~GaDi~v~s~k~l-g~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
-....|+|.++.++||| ++|+ ++|++++|++..+.+.... .|.- ..+. ...||.|
T Consensus 214 ~~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~~-----------~yl~---~~d~---t~~GSR~ 271 (380)
T PRK02769 214 PPFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVDV-----------DYIG---SRDQ---TISGSRN 271 (380)
T ss_pred ccCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccCc-----------cccC---CCCC---CccCCCC
Confidence 11223999999999555 4464 4789999998776653210 0110 0011 1256666
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCee
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNL 387 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~ 387 (946)
..+.. ++.++ +.++|.+|++++.+++.++++|+.++|++.| ++++..|...+|+|..+.. ++. +|+.+
T Consensus 272 g~~~l---~lw~a--L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p~~~~v~f~~~~~-~~~-----~~w~l 339 (380)
T PRK02769 272 GHTAL---LLWAA--IRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNPNSITVVFPCPSE-RIW-----KKWHL 339 (380)
T ss_pred cHHHH---HHHHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCceEEEEcCCCH-HHH-----hCeeE
Confidence 64322 33333 4899999999999999999999999999988 9988777777888876542 221 67887
Q ss_pred eeecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 388 RVVDSNTVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 388 ~~~~~~~lris~~~~~t~edid~ll~~l~~~ 418 (946)
... .+.++++++..+|++.+|+|++.|...
T Consensus 340 ~~~-~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 340 ATS-GNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred ccc-CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 764 458999999999999999999999753
No 71
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.87 E-value=5.9e-21 Score=218.24 Aligned_cols=302 Identities=20% Similarity=0.244 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHHhhCCCc-cc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~-~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~ 591 (946)
..+++.++++.+++++|.+. .. ++..+++.+...++.+++. . ..++++|++....|+++... ++..|++
T Consensus 41 ~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~---~--~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 115 (371)
T PF00266_consen 41 FAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLN---P--LKPGDEVLVTSNEHPSNRYPWEEIAKRKGAE 115 (371)
T ss_dssp HHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHH---H--GTTTCEEEEEESSHHHHHHHHHHHHHHTTEE
T ss_pred hhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccc---c--cccccccccccccccccccccccccccchhh
Confidence 56788899999999999987 43 3444555455444433321 1 12567899888888777632 4467999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCcc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 670 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~ 670 (946)
++.++.+.++.+|+++++++|+ +++.+|++++- +.+|+.. |+++|+++||++|+++++|+++..+...+ ...++
T Consensus 116 v~~i~~~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~-pi~~I~~~~~~~~~~~~vD~~~~~g~~~i-d~~~~ 190 (371)
T PF00266_consen 116 VRVIPADPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRN-PIEEIAKLAHEYGALLVVDAAQSAGCVPI-DLDEL 190 (371)
T ss_dssp EEEEEEGTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBS-SHHHHHHHHHHTTSEEEEE-TTTTTTSS---TTTT
T ss_pred hccccccccchhhhhhhhhhhc---cccceEEeecccccccEEe-eeceehhhhhccCCceeEechhccccccc-ccccc
Confidence 9999998899999999999997 89999999987 5689998 79999999999999999999976444332 34578
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccC-CCC------C----CCCCCCCCCCcccCccchhh
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-GGI------P----APEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~-~d~------~----~~~~~~~~~~i~~~~~g~~~ 739 (946)
|+|+++++.|| |+ |+||+|++++++++...+.....++. .+. + .+..+.+|.++ .
T Consensus 191 ~~D~~~~s~~K-l~-----gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~--------~ 256 (371)
T PF00266_consen 191 GADFLVFSSHK-LG-----GPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNV--------P 256 (371)
T ss_dssp TESEEEEESTS-TT-----SSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--H--------H
T ss_pred ccceeeecccc-cC-----CCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceee--------e
Confidence 99999999999 84 56789999999865555422211111 000 0 00011122222 1
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccC--CCceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~--~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
........+..+...|+.++.++...+++++.+.|+++..+..-++ .......+.+.++ +.+..++.++|.+
T Consensus 257 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~~ 330 (371)
T PF00266_consen 257 AIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP------GSDADDVVKYLEE 330 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET------TSSHHHHHHHHHH
T ss_pred hhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec------CCCHHHHHHHHhh
Confidence 1223345667776778888888899999999999998644333221 1112223445543 5688999999999
Q ss_pred CCcccCCCCC---C------CCCEEEEEcCCCCCHHHHHHH
Q 002263 818 YGFHGPTMSW---P------VPGTLMIEPTESESKEELDRY 849 (946)
Q Consensus 818 ~Gi~~~~~~~---p------~~~~lri~~t~~~t~~eid~~ 849 (946)
+||.+..-.. | ..+.+|+++..++|++|||+|
T Consensus 331 ~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 331 RGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred cCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 9998754110 1 248999999999999999986
No 72
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=1.5e-20 Score=214.82 Aligned_cols=306 Identities=17% Similarity=0.198 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHH------HHhcC-----------------CCCCCEEEEcC
Q 002263 519 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY------HKARG-----------------DHHRNVCIIPV 575 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y------~~~~G-----------------~~~~~~Ili~~ 575 (946)
-++.....+..+++||.+.++++|.||++++.++++++..- ...+| .-++|+|+..+
T Consensus 94 d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~ 173 (493)
T PRK13580 94 DTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMS 173 (493)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeec
Confidence 34455567788899999999999999999998888776521 00011 01268888666
Q ss_pred CCCCCCH-----HHHHHcCCEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCC
Q 002263 576 SAHGTNP-----ATAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGG 649 (946)
Q Consensus 576 saHg~~~-----~~a~~~G~~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ 649 (946)
..||-|. .......++++..++++ +|.+|++++++++. +++..|+++..+.+|... |+++|+++|+++|+
T Consensus 174 l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~---~~~plvii~g~S~~~~~~-dl~~i~eia~~~gA 249 (493)
T PRK13580 174 LDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAR---EFKPLILVAGYSAYPRRV-NFAKLREIADEVGA 249 (493)
T ss_pred CCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHh---hcCCEEEEeCccccCCCc-CHHHHHHHHHHcCC
Confidence 6665442 22222336777788874 58999999999997 667777777765555555 79999999999999
Q ss_pred EEEEecccccccccc-c-----CCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCC
Q 002263 650 QVYMDGANMNAQVGL-T-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEK 723 (946)
Q Consensus 650 ll~vD~a~~~a~~gl-~-----~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~ 723 (946)
+++||+||..++.+. . .| ..++|++++++|||| +||..|+|++++.+.+++. ...
T Consensus 250 ~L~VD~AH~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL------~GP~GG~I~~~~~l~~~L~-~a~----------- 310 (493)
T PRK13580 250 VLMVDMAHFAGLVAGKVFTGDEDP-VPHADIVTTTTHKTL------RGPRGGLVLAKKEYADAVD-KGC----------- 310 (493)
T ss_pred EEEEECchhhceeccccchhhcCC-CCCCcEEEeCChhhc------cCCCeEEEEecHHHHHHHh-hCC-----------
Confidence 999999997655431 1 12 237999999999998 4577789999987766551 000
Q ss_pred CCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccc
Q 002263 724 SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN 802 (946)
Q Consensus 724 ~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~ 802 (946)
+.+.+.+. ...+++.+.+.. .+....+++..++.+.|+++|++.|.+. +.+...+ ...|.+.+++.+
T Consensus 311 ----P~i~gg~l-~p~iAA~avAl~-e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~gg---TdshIV~V~lg~--- 378 (493)
T PRK13580 311 ----PLVLGGPL-PHVMAAKAVALA-EARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGG---TDNHLVLIDVTS--- 378 (493)
T ss_pred ----CcccCCCc-cHHHHHHHHHHH-HHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---CCCCEEEEEeCC---
Confidence 00100010 122333344433 3333345677888999999999999875 7764322 234667777753
Q ss_pred cCCCCHHHHHHHHHHCCcccCCCCCC-C------CCEEEEEcCCC----CCHHHHHHHHHHHHHHHHHH
Q 002263 803 TAGIEPEDVAKRLMDYGFHGPTMSWP-V------PGTLMIEPTES----ESKEELDRYCDALISIREEI 860 (946)
Q Consensus 803 ~~g~~~~~i~~~L~~~Gi~~~~~~~p-~------~~~lri~~t~~----~t~~eid~~~~aL~~i~~e~ 860 (946)
.+.+...+.++|.+.||.+....+| + ...|||+++.. ++++||+++++.|.++++..
T Consensus 379 -~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 379 -FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred -HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 1234457888999999998765555 2 46799999884 46899999999999887654
No 73
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.87 E-value=4.7e-20 Score=211.15 Aligned_cols=306 Identities=16% Similarity=0.160 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHhhCCCcc-c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGFDSF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~-~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~ 591 (946)
..+.+.++++++++++|.+.. . +..++++++... +++.+. .++++|+++...|+++.. .++..|++
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~---~~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~ 113 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNI---ALKGLL-----KEGDHVITTPMEHNSVARPLECLKEQIGVE 113 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHH---HHHhcc-----CCCCEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 345677899999999998643 3 334455544433 333321 256889998888877643 35567999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCcc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 670 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~ 670 (946)
++.++.+.++.+|+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ....+
T Consensus 114 ~~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~-~~~~i~~l~~~~~~~livD~a~~~g~~~~-~~~~~ 188 (376)
T TIGR01977 114 ITIVKCDNEGLISPERIKRAIK---TNTKLIVVSHASNVTGTIL-PIEEIGELAQENGIFFILDAAQTAGVIPI-DMTEL 188 (376)
T ss_pred EEEEecCCCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccC-CHHHHHHHHHHcCCEEEEEhhhccCccCC-Cchhc
Confidence 9999998888999999999996 689999999985 689998 79999999999999999999874332211 22357
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEeccc-CCCC-CCCccccCCCCCC-----CCCCCCCCCcccCccchhhHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFL-PSHPVVSTGGIPA-----PEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~l-p~~~v~~~~d~~~-----~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
|+|++++++||||+.| +|.|+++++++. .+.+ .+........+.. .+.+.++.+ ...+.+
T Consensus 189 ~~D~~~~s~~K~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~--------~~~~~a 255 (376)
T TIGR01977 189 AIDMLAFTGHKGLLGP-----QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLN--------TPGIAG 255 (376)
T ss_pred CCCEEEecccccccCC-----CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCC--------HHHHHH
Confidence 9999999999999533 367778877653 2221 1110000000000 001111111 112333
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccC--CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-Cc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY--PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GF 820 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~--~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi 820 (946)
..+.+..+.+.|+..+.++...+++++.++|++.. .+..+.......+.+.+.++ +.+..++.++|.++ ||
T Consensus 256 ~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~~gi 329 (376)
T TIGR01977 256 LNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE------GIDSEEVADILDEKFDI 329 (376)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC------CCCHHHHHHHHhccCCE
Confidence 45567777778888888888999999999998753 33211101111223444443 46788999999987 88
Q ss_pred ccCCCC-C----------CCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 821 HGPTMS-W----------PVPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 821 ~~~~~~-~----------p~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.+..-. + ...+.+|++++..+|.+|+|+++++|++
T Consensus 330 ~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 330 ATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 864211 0 1247899999999999999999999975
No 74
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.87 E-value=4.6e-21 Score=214.25 Aligned_cols=316 Identities=18% Similarity=0.214 Sum_probs=227.8
Q ss_pred CCcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHH
Q 002263 52 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 131 (946)
Q Consensus 52 n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea 131 (946)
|.+.++|+|.+.+|..+.+.+. .+.+ |.+..+ .++...|+.+.+.++++.+|+++|.+. +.+|.+|-.+..+
T Consensus 43 nf~SNdYLGLa~~~~~~~a~~~-~~~~---~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy~AN~~ 114 (388)
T COG0156 43 NFCSNDYLGLASHPELIEAAKA-AIRR---YGVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFSSGFVANLG 114 (388)
T ss_pred eeeccCcccccCCHHHHHHHHH-HHHH---hCCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccchhHHH
Confidence 4456789999988876666664 4443 333322 667788999999999999999999987 7888888888777
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccccccc-cCC---C--EeEEEEEcC--CCceeecch
Q 002263 132 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG---D--VCGVLVQYP--GTEGEVLDY 203 (946)
Q Consensus 132 ~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-i~~---~--t~~v~v~~p--n~~G~i~di 203 (946)
++-++. +++|.|+.++.+|.|.++.++ +++..-+.+.+.|+++|++ +.+ . .+.++++.. ++.|.+.|+
T Consensus 115 ~i~~l~---~~~dli~~D~lnHASiidG~r-ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 115 LLSALL---KKGDLIFSDELNHASIIDGIR-LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHHhc---CCCcEEEEechhhhhHHHHHH-hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 776663 278999999999999999987 4555566777788888887 532 1 234555544 889999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCCCCC-----Ccc-----ceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCC
Q 002263 204 GDFIKNAHANGVKVVMATDLLALTILKPPG-----ELG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 272 (946)
Q Consensus 204 ~~i~~~a~~~gal~~v~a~~~al~~l~~~~-----~~G-----aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp 272 (946)
++|++++++||++++|+ +.++.|++.+-| .+| +||++++. |.||. .| ||+.++..+.+.|
T Consensus 191 ~~l~~L~~ky~a~L~VD-EAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~G----g~v~g~~~~~d~L- 261 (388)
T COG0156 191 PELVELAEKYGALLYVD-EAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SG----GYIAGSAALIDYL- 261 (388)
T ss_pred HHHHHHHHHhCcEEEEE-ccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc---cC----ceeeCcHHHHHHH-
Confidence 99999999999999993 567888876543 233 38999997 99973 34 5888888777665
Q ss_pred CceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC
Q 002263 273 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 352 (946)
Q Consensus 273 ~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 352 (946)
|.++.+.|.|++..++++++...+..-.+-..+..++..+++.++++.++..
T Consensus 262 ----------------------------~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 262 ----------------------------RNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred ----------------------------HHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 1123344555444444444432222111223467788889999999877776
Q ss_pred CCEEEcC-CCCcCeEEEecCC-HHHHHHHHHHcCCeeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 353 GTVEVQG-LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 353 g~~~~~~-~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~~-------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
| +.+.. ...+-++.+..+. +.++...|.++||++..+. ...+|+|++..+|++||++++++|..
T Consensus 314 ~-~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 314 G-LVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred C-CccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 7 66532 2222234444333 7889999999999986542 26899999999999999999999863
No 75
>PRK02948 cysteine desulfurase; Provisional
Probab=99.87 E-value=7.7e-20 Score=209.85 Aligned_cols=306 Identities=16% Similarity=0.194 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHHHhhCCCccccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH---HHHcCCEEEE
Q 002263 519 QEMFNNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVS 594 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~---a~~~G~~vv~ 594 (946)
.+.+.++++.+++++|.+...+. .++++++...++.++ .... .+++++|+++...|+++..+ ++..|++++.
T Consensus 42 ~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~---~~~~-~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~ 117 (381)
T PRK02948 42 SSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL---LNAL-PQNKKHIITTPMEHASIHSYFQSLESQGYTVTE 117 (381)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH---HHhc-cCCCCEEEECCcccHHHHHHHHHHHhCCCEEEE
Confidence 45678899999999998764443 344455543333332 2110 12457899988888887765 4567999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCC
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|.|
T Consensus 118 v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~vivD~~~~~g~~~~-~~~~~~~d 192 (381)
T PRK02948 118 IPVDKSGLIRLVDLERAIT---PDTVLASIQHANSEIGTIQ-PIAEIGALLKKYNVLFHSDCVQTFGKLPI-DVFEMGID 192 (381)
T ss_pred EeeCCCCCCCHHHHHHhcC---CCCEEEEEECCcCCcEeeh-hHHHHHHHHHHcCCEEEEEChhhcccccc-CcccCCCC
Confidence 9998889999999999996 688899999995 799998 79999999999999999998764332121 23467999
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccC--CCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA--PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~--~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
+++.++||+| |.+|+|++++++++. +..++.. . .++.+.++.++ ....++.+.+..+
T Consensus 193 ~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~----~---~~~~~~~t~~~--------~~~~a~~~al~~~ 251 (381)
T PRK02948 193 SLSVSAHKIY------GPKGVGAVYINPQVRWKPVFPGTT----H---EKGFRPGTVNV--------PGIAAFLTAAENI 251 (381)
T ss_pred EEEecHHhcC------CCCcEEEEEEcCCCCCCCcccCCC----C---CCCcCCCCccH--------HHHHHHHHHHHHH
Confidence 9999999976 335789999887641 1111110 0 00011112221 1112222333332
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCce-eeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC---
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTV-AHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--- 826 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~-~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~--- 826 (946)
. +++.+..++...+++++.++|++. +++...+..... .+.+.+.++ +++..++.++|.++||.+....
T Consensus 252 ~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~ 324 (381)
T PRK02948 252 L-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK------GIEGQYTMLECNRRGIAISTGSACQ 324 (381)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC------CCCHHHHHHhcccCCEEEEchHhcC
Confidence 2 346666777888999999999875 555322211111 111222322 4567888989989999975321
Q ss_pred --C--C-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 827 --W--P-------------VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 827 --~--p-------------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+ | ..+.+||+++..+|++|+|+++++|++++++..
T Consensus 325 ~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 325 VGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 1 136899999999999999999999999877654
No 76
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=4.6e-20 Score=215.71 Aligned_cols=305 Identities=19% Similarity=0.198 Sum_probs=203.3
Q ss_pred HHHHHH-HHHHHHHhhCCCc----ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH-------
Q 002263 519 QEMFNN-LGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA------- 586 (946)
Q Consensus 519 ~~~~~e-l~~~la~l~G~~~----~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~------- 586 (946)
.+.+++ .++.+++++|.+. +++++.+|++++.+++.++. +++++|++....||++...+.
T Consensus 78 ~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~--------~~gd~Ii~~~~ehg~~l~~~~~l~~~~~ 149 (452)
T PTZ00094 78 VDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALL--------QPHDRIMGLDLPSGGHLTHGFYTAKKKV 149 (452)
T ss_pred HHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhc--------CCCCEEEecccccCCccccccccccccc
Confidence 344543 6779999999875 34566788877755444441 246889998888998865421
Q ss_pred ---HcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccc
Q 002263 587 ---MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 663 (946)
Q Consensus 587 ---~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g 663 (946)
..+++++.++++.+|.+|+++|+++++++ +++.|+++. +.+|... |+++|+++||++|++++||++|..++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~~-s~~g~~~-di~~I~~i~~~~ga~l~vDaaq~~G~i~ 225 (452)
T PTZ00094 150 SATSIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAGA-SAYPRDI-DYKRFREICDSVGAYLMADIAHTSGLVA 225 (452)
T ss_pred ccceeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEeC-CCCCCcc-CHHHHHHHHHHcCCEEEEeccchhcccc
Confidence 12355666777778999999999999743 344455554 3578887 8999999999999999999998655443
Q ss_pred c---cCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 664 L---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 664 l---~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
. ..|. .|+|++++++||||+ ||..|++++++.+.+.+.... .. ...+.+.+++ +...
T Consensus 226 ~~~~~~~~-~~~D~l~~S~hK~l~------GP~Gg~l~~~~~~~~~l~~~~-~~----------~~~p~~~G~~--~~~~ 285 (452)
T PTZ00094 226 AGVLPSPF-PYADVVTTTTHKSLR------GPRSGLIFYRKKVKPDIENKI-NE----------AVFPGLQGGP--HNHQ 285 (452)
T ss_pred CCCCCCCC-CCCcEEEcCCccCCC------CCCceEEEEecccchHHHHhh-cc----------ccCCCCCCCc--hHHH
Confidence 2 1222 389999999999984 565578888766543321110 00 0000111111 1122
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
+++..+.+..+...++.+..++...++++|.++|++. +.+...+. . .|..++++.. .+++..++.+.|.++|
T Consensus 286 iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~-~--~~~~~v~~~~----~~~~~~~~~~~L~~~g 358 (452)
T PTZ00094 286 IAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT-D--NHLVLVDLRP----FGITGSKMEKLLDAVN 358 (452)
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC-C--CceEeecCCc----CCCCHHHHHHHHHHCC
Confidence 2333444566655677777888889999999999774 55543221 1 2335555542 2567889999998899
Q ss_pred cccCCCCCC------CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTMSWP------VPGTLMIEPTESES----KEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 820 i~~~~~~~p------~~~~lri~~t~~~t----~~eid~~~~aL~~i~~e~~~ 862 (946)
|.+....-| .++++|+++++.+| ++||++++++|.+++.....
T Consensus 359 I~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~ 411 (452)
T PTZ00094 359 ISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQE 411 (452)
T ss_pred cEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 987421111 24789999988776 99999999999998876443
No 77
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.4e-20 Score=202.60 Aligned_cols=296 Identities=20% Similarity=0.283 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH---HHHcC--CEEEEE
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG--MKIVSV 595 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~---a~~~G--~~vv~v 595 (946)
+..-..+..++|||.+.+++||.||++++.+.++|+. +++|+|+-.+..||-|-.- ....| ++++..
T Consensus 73 vE~laierak~LFga~~anVQPhSGs~AN~av~~All--------~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y 144 (413)
T COG0112 73 VEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALL--------QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSY 144 (413)
T ss_pred HHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHc--------CCCCeEecccCCCCCcccCCCCCCccceeEEeEec
Confidence 3444667888999999999999999999988887764 2678999777777755332 22333 577788
Q ss_pred cCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccc---ccccCCCccC
Q 002263 596 GTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSPGYIG 671 (946)
Q Consensus 596 ~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~---~gl~~pg~~G 671 (946)
++|+ ++.+|.|++++++.+++++ .|+.-+..+.-.+ |++++.+||++.|+.|.+|.||..++ +.+..|-..
T Consensus 145 ~vd~et~~IDyD~~~k~a~e~kPK--~ii~G~SaY~r~i--d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~- 219 (413)
T COG0112 145 GVDPETGLIDYDEVEKLAKEVKPK--LIIAGGSAYSRPI--DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH- 219 (413)
T ss_pred ccccccCccCHHHHHHHHHHhCCC--EEEECcccccccc--CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-
Confidence 8885 4999999999999976555 4655544454445 69999999999999999999986443 335567666
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
+||++.+.|||| .||..|+|.+++ ++..++...++ +.+.+.|. .-.+++.|.++..+
T Consensus 220 AdvVTtTTHKTl------rGPrGG~Il~~~eel~kkin~aVF---------------Pg~qggpl-~HviAakaVa~~Ea 277 (413)
T COG0112 220 ADVVTTTTHKTL------RGPRGGIILTNDEELAKKINSAVF---------------PGLQGGPL-MHVIAAKAVAFKEA 277 (413)
T ss_pred cceEeCCcccCC------CCCCceEEEeccHHHHHHhhhhcC---------------CccCCChH-HHHHHHHHHHHHHH
Confidence 999999999998 689999999996 66655432211 01111111 12244455555444
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC--CCC
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT--MSW 827 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~--~~~ 827 (946)
+ ..++++.+++.+.||+.|++.|.+. +.++. | ++..|.+++|+++ .+++..+..+.|.+.||.+.. +-|
T Consensus 278 l-~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvs-G--gTdnHl~lVDl~~----~~~~Gk~ae~~L~~~~It~NKN~iP~ 349 (413)
T COG0112 278 L-EPEFKEYAKQVVKNAKALAEALKERGFKVVS-G--GTDNHLVLVDLRS----KGLTGKKAEAALERAGITVNKNAIPF 349 (413)
T ss_pred c-ChhHHHHHHHHHHHHHHHHHHHHHcCCeEec-C--CccceEEEEEccc----CCCCHHHHHHHHHHcCEeeccCCCCC
Confidence 4 5679999999999999999999875 88764 2 4567889999873 367889999999999998753 222
Q ss_pred ----C-CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHH
Q 002263 828 ----P-VPGTLMIEPTESES----KEELDRYCDALISIREE 859 (946)
Q Consensus 828 ----p-~~~~lri~~t~~~t----~~eid~~~~aL~~i~~e 859 (946)
| ++..|||...+.+| ++|++++.+.+.+++..
T Consensus 350 D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 350 DPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 2 45789998877654 46777777777666554
No 78
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.87 E-value=9e-20 Score=210.65 Aligned_cols=308 Identities=15% Similarity=0.169 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH---HHcCCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a---~~~G~~vv~v 595 (946)
+.+.++++.+++++|.+.. .+++++|+.+...++.++..+.. +++++|+++...|.++...+ +..|++++.+
T Consensus 47 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v 122 (402)
T TIGR02006 47 EAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYK----SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYL 122 (402)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEE
Confidence 5677899999999998753 34455666565444444432111 24678999988888776553 4569999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
++++++.+|+++|+++++ +++++|++++++ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+|+
T Consensus 123 ~~~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~-~~~~I~~l~~~~g~~livD~a~a~g~~~~-~~~~~~~D~ 197 (402)
T TIGR02006 123 PPKSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERKVFFHVDAAQSVGKIPI-NVNELKVDL 197 (402)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceecc-cHHHHHHHHHHcCCEEEEEcchhcCCccc-CccccCCCE
Confidence 998889999999999996 678999999984 689998 79999999999999999999975332221 234679999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+++++||++ |.+|+|+++++++....+.....+. ++ .++.+.++.++. ....+ ...+..+ .+
T Consensus 198 ~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~--~~-~~~~~~gt~~~~-----~~~al---~~al~~~-~~ 259 (402)
T TIGR02006 198 MSISGHKIY------GPKGIGALYVRRKPRVRLEALIHGG--GH-ERGMRSGTLPTH-----QIVGM---GEAFRIA-KE 259 (402)
T ss_pred EEEehhhhc------CCCceEEEEEccCCCCCCCceecCC--Cc-cCCccCCCccHH-----HHHHH---HHHHHHH-HH
Confidence 999999965 3347899999975443332211111 00 001112222221 11111 2233333 24
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-------CC
Q 002263 755 GLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-------MS 826 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-------~~ 826 (946)
++....++...+++++.++|+++..+...++.. ...+.+++.+. +.+..++..+|. |+.+++ ..
T Consensus 260 ~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~------~~~~~~~~~~l~--~i~v~~G~~c~~~~~ 331 (402)
T TIGR02006 260 EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN------YVEGESLIMALK--DLAVSSGSACTSASL 331 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe------CcCHHHHHHhcC--CEEEechhhcCCCCC
Confidence 566666777788899999998753332222111 11123345443 245667777763 443211 00
Q ss_pred CC-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 WP-------------VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 ~p-------------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.| ..+.+|+++...+|++|||+|+++|.++.++++.
T Consensus 332 ~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 332 EPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred CccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 01 1378999999999999999999999999887654
No 79
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=2.1e-19 Score=206.26 Aligned_cols=307 Identities=14% Similarity=0.153 Sum_probs=197.3
Q ss_pred HHHHHHHHHHhhCC-Ccccc-cCCchHHHHHHHHHHHHHHHHhcC-CCCCCEEEEcCCCCCCCHHH---HHHcCCEEEEE
Q 002263 522 FNNLGEWLCTITGF-DSFSL-QPNAGAAGEYAGLMVIRAYHKARG-DHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSV 595 (946)
Q Consensus 522 ~~el~~~la~l~G~-~~~~l-~~~sGa~ge~a~l~a~r~y~~~~G-~~~~~~Ili~~saHg~~~~~---a~~~G~~vv~v 595 (946)
+.+..+.+.+.+|. +...+ ..++++++. .++++.+....- ..++++|+++...|+++..+ ++..|++++.+
T Consensus 44 l~~a~~~~~~~~~~~~~~~i~~t~g~teal---~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v 120 (382)
T TIGR03403 44 IAEALDKLYKGINARDLDDIIITSCATESN---NWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL 120 (382)
T ss_pred HHHHHHHHHHHcCcCCCCeEEEeCCHHHHH---HHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE
Confidence 44444555555665 33333 344444443 333443211000 01346799998888877765 45689999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
|++++|.+|+++|+++++ ++++++++++| |.+|.+. |+++|+++||++|+++++|+++..+... ....++|+|+
T Consensus 121 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~~ivD~a~~~g~~~-~~~~~~~~D~ 195 (382)
T TIGR03403 121 PINEQGTITAEQVREAIT---EKTALVSVMWANNETGMIF-PIKEIGEICKERGVLFHTDAVQAIGKIP-VDVQKAGVDF 195 (382)
T ss_pred ecCCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCcccc-CHHHHHHHHHHcCCEEEEechhhcCCCc-cCccccCCCE
Confidence 998889999999999996 68889999988 4799998 7999999999999999999986432211 2345689999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+++++||++ |.||+|++++++.+. ..| ...|. .+ ..+.+.++.++. . ...+...+..+ .+
T Consensus 196 ~~~s~~K~~------gp~G~g~l~vr~~~~-~~p-~~~g~--~~-~~~~~~gt~~~~-------~-~~al~~al~~~-~~ 255 (382)
T TIGR03403 196 LSFSAHKFH------GPKGVGGLYIRKGVE-LTP-LFHGG--EH-MGGRRSGTLNVP-------Y-IVAMGEAMRLA-NE 255 (382)
T ss_pred EEEcchhhC------CCCceEEEEECCCCC-CCC-cccCC--CC-CCCcccCCcChH-------H-HHHHHHHHHHH-HH
Confidence 999999975 346789999987642 112 11111 00 000111222221 1 11122223322 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC---C-----
Q 002263 755 GLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---M----- 825 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~---~----- 825 (946)
++....++....++++.++|+++..+.+.++.. ...+.+.+.++ +++..++.++|.++||.+.. +
T Consensus 256 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~gI~v~~g~~c~~~~~ 329 (382)
T TIGR03403 256 YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK------GVEGEAMLWDLNKAGIAASTGSACASEDL 329 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC------CCCHHHHHHhhccCCEEEEchhccCCCCC
Confidence 455555667778889999998753332222211 11122344443 56788999999999998753 1
Q ss_pred ---------CCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 826 ---------SWP---VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 826 ---------~~p---~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.. ..+.+|++++..+|++|||+|+++|++++++++.
T Consensus 330 ~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 330 EANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred CcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 000 1267999999999999999999999999888765
No 80
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.86 E-value=4.3e-20 Score=209.87 Aligned_cols=317 Identities=16% Similarity=0.112 Sum_probs=218.0
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcc-eEEcccHHHHHHHHHHHhccccCCC
Q 002263 65 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCNNIQKGKK 143 (946)
Q Consensus 65 ~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~-~sl~~~~Ta~~ea~~la~~~~~~~g 143 (946)
|...|+.+.+++.+.. ..+ + +.+..+.+.++++.+++++|.+..+ +.++.++|.+...++.++ .. +|
T Consensus 7 ~~~~~~~v~~a~~~~~---~~~--~----~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~-~~--~g 74 (356)
T cd06451 7 PSNVPPRVLKAMNRPM---LGH--R----SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL-LE--PG 74 (356)
T ss_pred CcCCCHHHHHHhCCCc---cCC--C----CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh-CC--CC
Confidence 3457788776664321 111 1 2234567888999999999996544 556777787666555554 23 78
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHh
Q 002263 144 KTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHA 212 (946)
Q Consensus 144 d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~ 212 (946)
++|+++...|++.. +...++..|.+++.++. +++++ +++ ++++|++++| |.+|.+.|+++|+++||+
T Consensus 75 ~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~ 152 (356)
T cd06451 75 DKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKK 152 (356)
T ss_pred CEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHh
Confidence 99999998887632 11223446777777654 34555 665 8999999887 679999999999999999
Q ss_pred CCcEEEEEecCccccCC-CCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCC--ceEeEeecCCCCcce
Q 002263 213 NGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG--RIVGVSIDSSGKPAL 288 (946)
Q Consensus 213 ~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~--~~~G~s~d~~g~~~~ 288 (946)
+|+++++|+ .++++.. .+..++|+|++++++ |+|++| +|+|++++++++.+.+.. ...+ +
T Consensus 153 ~~~~li~D~-~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~----------~ 216 (356)
T cd06451 153 HDALLIVDA-VSSLGGEPFRMDEWGVDVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKG----------F 216 (356)
T ss_pred cCCEEEEee-ehhccCccccccccCccEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCc----------e
Confidence 999999943 3455543 345678999999998 777654 357899999988776642 1111 1
Q ss_pred EEecccccc--ccc-ccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCc
Q 002263 289 RVAMQTREQ--HIR-RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFF 363 (946)
Q Consensus 289 ~l~l~tre~--~ir-re~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~ 363 (946)
.+.++...+ +.+ .+.+|.|+ ..++++.+++ .++...|++++.++..++++++++.|+++| +++... .+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~t~~~---~~~~a~~aal--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 290 (356)
T cd06451 217 YFDLLLLLKYWGEGYSYPHTPPV---NLLYALREAL--DLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRS 290 (356)
T ss_pred eecHHHHHhhhcccCCCCCCChH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCC
Confidence 122111111 111 23334443 4455666665 566668999999999999999999999987 888742 223
Q ss_pred CeE-EEecC-C--HHHHHHHHHHc-CCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 364 DTV-KVKCA-D--AHAIASAAYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 364 ~~~-~i~~~-~--~~~v~~~L~~~-GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+ .+..+ + ..+++++|.++ ||.+... .++.+|+|++.++|++|+++++++|..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 291 PTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred CceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 333 23443 2 78899999998 9988642 246899999999999999999999963
No 81
>PRK14012 cysteine desulfurase; Provisional
Probab=99.86 E-value=1.2e-19 Score=209.86 Aligned_cols=290 Identities=15% Similarity=0.136 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 98 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 98 l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
-+.+.++++.+++++|+++.++.+++++|.+...++.++. ...++||+||++..+|+++...++.+ +..|++++.+++
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEcc
Confidence 3678889999999999988889999999988776655442 11137899999999999999888654 346888888755
Q ss_pred --------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccc
Q 002263 177 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 245 (946)
Q Consensus 177 --------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k 245 (946)
+++++ +++++++|+++++ |.+|.+.|+++|.++||++|+++++|+ ..+++... +..++++|++++|++
T Consensus 127 ~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDA-AQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEc-chhcCCcccCcccCCCCEEEEehh
Confidence 34555 7788999999886 789999999999999999999999943 33555443 456789999999995
Q ss_pred cccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH
Q 002263 246 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 325 (946)
Q Consensus 246 ~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~ 325 (946)
|+.+| ++.|+++++++...++.+...|... ..+.+.+|.|+. .+.++.+++- +
T Consensus 206 K~~gp-----~g~G~l~~~~~~~~~~~~~~~g~~~-----------------~~~~~~gt~~~~---~~~~l~~al~--~ 258 (404)
T PRK14012 206 KIYGP-----KGIGALYVRRKPRVRLEAQMHGGGH-----------------ERGMRSGTLPTH---QIVGMGEAAR--I 258 (404)
T ss_pred hccCC-----CceEEEEEecCCCCCCCceecCCCc-----------------cCCccCCCcCHH---HHHHHHHHHH--H
Confidence 55333 3578999988754444333333110 012356777773 3445555552 2
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcCe--EEEecCCHHHHHHHHHHcCCeee----e-------
Q 002263 326 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDT--VKVKCADAHAIASAAYKIEMNLR----V------- 389 (946)
Q Consensus 326 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~~--~~i~~~~~~~v~~~L~~~GI~~~----~------- 389 (946)
. ..+++++.++...+++++.+.|+++.++.+.+. ..... +.+...+..++.+.|.+.+|... .
T Consensus 259 ~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~ 337 (404)
T PRK14012 259 A-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSY 337 (404)
T ss_pred H-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEchhhhCCCCCCCCH
Confidence 2 235677889999999999999998844776532 11222 44443334567777754333211 0
Q ss_pred ----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 ----------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ----------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...+.||+|++.++|++|+|+++++|+.
T Consensus 338 ~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 338 VLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 1247899999999999999999999974
No 82
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.86 E-value=1e-19 Score=207.47 Aligned_cols=317 Identities=15% Similarity=0.121 Sum_probs=215.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc--ceEEcccHHHHHHHHHHHh
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~--~~sl~~~~Ta~~ea~~la~ 136 (946)
++.| |..+++.+.+.+.. .| . .+.+ ...+.+.++++.+++|+|+++. ++.++.++|.++++++.++
T Consensus 7 ~~pg--p~~~~~~v~~~~~~--~~-~---~~~~----~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l 74 (363)
T TIGR02326 7 LTPG--PLTTSRTVKEAMLF--DW-C---TWDS----DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA 74 (363)
T ss_pred ecCC--CCCCCHHHHHHhCC--CC-C---CCCh----HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc
Confidence 3566 56677777655432 22 1 1222 3456788899999999999764 5788899999998887765
Q ss_pred ccccCCCCE-EEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cC--CCEeEEEEEcC-CCceeecch
Q 002263 137 NIQKGKKKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 203 (946)
Q Consensus 137 ~~~~~~gd~-vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~--~~t~~v~v~~p-n~~G~i~di 203 (946)
. . ++++ |+++...|+.... ..++..|++++.++. +++++ +. ++++.|.+.++ |.+|.+.|+
T Consensus 75 ~-~--~~~~vlv~~~~~~~~~~~---~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i 148 (363)
T TIGR02326 75 V-P--KDGKLLVVINGAYGARIV---QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPI 148 (363)
T ss_pred C-C--CCCeEEEEeCChhhHHHH---HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcH
Confidence 3 2 4555 5567778876532 224557888887765 34444 43 35667777765 789999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeec
Q 002263 204 GDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 281 (946)
Q Consensus 204 ~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d 281 (946)
++|+++||++|++++||+ ..+++..+ +..++|+|++++|+ |+|++ +||+||++++++.++++.+...+
T Consensus 149 ~~I~~l~~~~g~~livD~-~~~~g~~~~~~~~~~~D~~~~s~~K~l~~-----p~G~G~l~~~~~~~~~~~~~~~~---- 218 (363)
T TIGR02326 149 EAVAKLAHRHGKVTIVDA-MSSFGGIPIDIAELHIDYLISSANKCIQG-----VPGFGFVIARQAELAACKGNARS---- 218 (363)
T ss_pred HHHHHHHHHcCCEEEEEc-cccccCcccchhhcCccEEEecCcccccc-----CCcceEEEECHHHHHHhhcCCCc----
Confidence 999999999999999953 44665543 45679999999999 66743 45789999999887765332211
Q ss_pred CCCCcceEEeccc----cc--ccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCC
Q 002263 282 SSGKPALRVAMQT----RE--QHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGT 354 (946)
Q Consensus 282 ~~g~~~~~l~l~t----re--~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~ 354 (946)
+.+++.. .+ ...++ .|.|+ ...+++.+++ .++..+ |++++.+++.++..++++.|+++|
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~--ft~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g- 284 (363)
T TIGR02326 219 ------LSLDLYDQWRCMEDNHGKWR--FTSPT---HVVHAFAQAL--LELEKEGGVAARHQRYQQNQKTLVAGMRALG- 284 (363)
T ss_pred ------eeecHHHHHHHHhccCCCCC--CCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 2222110 00 00111 13333 4455555555 344344 588999999999999999999998
Q ss_pred EEEcCCC--CcCe-EEEecCC-----HHHHHHHHHHcCCeeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 355 VEVQGLP--FFDT-VKVKCAD-----AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 355 ~~~~~~~--~~~~-~~i~~~~-----~~~v~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++++..+ ..+. +.|..+. ..++.+.|.++||.++.- ..+.+|++++.+++.+|+++++++|+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 285 FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 8876432 2222 3344432 468999999999998643 146899999889999999999999963
No 83
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=7.3e-20 Score=208.68 Aligned_cols=295 Identities=13% Similarity=0.146 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH---HHHcCCEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~---a~~~G~~vv 593 (946)
..+.+.++++.+++++|.+... +++++|+.+...++.++..... .++++|+++...|+++... +...|++++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~----~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 41 SEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYK----DKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc----CCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 3466888999999999987533 4445555554334433322111 2467899998888876554 335799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 672 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga 672 (946)
.++++++|.+|+++++++++ ++++++++++++ .+|.+. |+++|+++||++|++++||+++..+... ....++|+
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~-~l~~I~~~~~~~g~~~~vD~a~~~g~~~-~~~~~~~~ 191 (364)
T PLN02651 117 YLPVKSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQ-PVEEIGELCREKKVLFHTDAAQAVGKIP-VDVDDLGV 191 (364)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceecc-cHHHHHHHHHHcCCEEEEEcchhhCCcc-cCcccCCC
Confidence 99998889999999999997 789999999884 789998 7999999999999999999997543322 24567899
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
|+++++.|||+ |.+|+|++++++++...+.....|.... .+.+.+|.++.. ...+..|..+ +-
T Consensus 192 D~~~~s~hK~~------gp~G~g~l~v~~~~~~~l~p~~~g~~~~---~~~~~GT~~~~~-----~~~l~~al~~---~~ 254 (364)
T PLN02651 192 DLMSISGHKIY------GPKGVGALYVRRRPRVRLEPLMSGGGQE---RGRRSGTENTPL-----VVGLGAACEL---AM 254 (364)
T ss_pred CEEEechhhhC------CCCceEEEEEcCCCCCCCCccccCCCcc---CCccCCCccHHH-----HHHHHHHHHH---HH
Confidence 99999999963 3357999999987766664333321100 112234444321 1222233333 32
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc---CCeeec-cCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC---
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH---YPILFR-GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM--- 825 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~~~-~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~--- 825 (946)
. +..+..++....++++.++|++. +++..+ .+.....+.+.|.++ +++..+++++|.+ |.+..-
T Consensus 255 ~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~~--i~v~~g~~c 325 (364)
T PLN02651 255 K-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA------YVEGESLLMGLKE--VAVSSGSAC 325 (364)
T ss_pred H-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC------CCCHHHHHHHhCC--EEEEchhhc
Confidence 2 33566677778889999998752 333221 111111223445543 5788899999965 554211
Q ss_pred --------------CCC---CCCEEEEEcCCCCCHHHHH
Q 002263 826 --------------SWP---VPGTLMIEPTESESKEELD 847 (946)
Q Consensus 826 --------------~~p---~~~~lri~~t~~~t~~eid 847 (946)
... ..+.+|+|+..++|++|||
T Consensus 326 ~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 326 TSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 110 1378999999999999986
No 84
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=1.3e-19 Score=209.66 Aligned_cols=295 Identities=15% Similarity=0.169 Sum_probs=189.4
Q ss_pred HhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEE----EEEcCCCCC
Q 002263 531 TITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKI----VSVGTDAKG 601 (946)
Q Consensus 531 ~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~v----v~v~~~~~g 601 (946)
+++|.+... ++..+++.+...+ ++.+. .+|. ++++|+++...|+++... ++..|+++ +.++.+.+|
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~---~~~~~-~~~~-~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 154 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLL---LASFY-KPTP-KRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEE 154 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHH---HHHhc-CCcC-CccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCC
Confidence 789987543 3334444443222 33321 2221 234688887888875443 45678887 567766678
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLH 680 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~h 680 (946)
.+|++++++.+++..++|++|++++++ .+|.+. |+++|+++||++|++++||++|..+...+ ...++|+|+++++.|
T Consensus 155 ~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~-~~~~i~~~~~~~g~~~~vD~aq~~G~~~i-d~~~~gvD~~~~s~h 232 (406)
T TIGR01814 155 TLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLF-DMAAITRAAHAKGALVGFDLAHAVGNVPL-DLHDWGVDFACWCTY 232 (406)
T ss_pred ccCHHHHHHHHHhcCCCeEEEEEeccccccceec-CHHHHHHHHHHcCCEEEEEcccccCCccc-ccccCCCCEEEEcCc
Confidence 899999999987555789999999986 589998 79999999999999999999986443322 335689999999999
Q ss_pred cccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCC-----C------C--CCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 681 KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGG-----I------P--APEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 681 K~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d-----~------~--~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
|||+ |||| |.+++++ .+....|. ..|+... + + ..+.+.+|.++ ..+....+
T Consensus 233 K~l~-----g~pG-~~l~v~~~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~--------~~~~~l~~ 297 (406)
T TIGR01814 233 KYLN-----AGPG-AGAFVHEKHAHTERPR-LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPI--------LSVAALRG 297 (406)
T ss_pred cccC-----CCCC-eEEEEehhhhhhcCCC-CCcccCCCCccccccccccCCCccceeeCCccH--------HHHHHHHH
Confidence 9984 5677 5565544 32222221 1221100 0 0 00011122222 12222334
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCC----eeeccCCCc--eeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYP----ILFRGVNGT--VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~----v~~~~~~~~--~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
.+..+...|+.+..++...+++++.+.|++... +...++..+ ....+.|.++ ++..++.++|.++||
T Consensus 298 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-------~~~~~~~~~L~~~gi 370 (406)
T TIGR01814 298 SLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-------VPGKAVFQALIKRGV 370 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-------CCHHHHHHHHHHCCE
Confidence 455555667778888888999999999876421 211122111 1122344432 357899999999999
Q ss_pred ccCCCCCCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEP-TESESKEELDRYCDALISIR 857 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~-t~~~t~~eid~~~~aL~~i~ 857 (946)
.+... .++.+|+++ +.++|++|||+++++|++++
T Consensus 371 ~v~~~---~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 371 IGDKR---EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEecc---CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 86421 247899999 57999999999999998764
No 85
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.86 E-value=3.9e-19 Score=204.51 Aligned_cols=349 Identities=15% Similarity=0.114 Sum_probs=224.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhc-CCcceeecCCCCCCCC-CcHHHHHHHHhCCcccc-cc-CCChhhhhhhHHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASM-NKVYKSFIGMGYYNTH-VPPVILRNIMENPAWYT-QY-TPYQAEIAQGRLESLL 102 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~-n~~~~~~~G~g~~~~~-~p~~i~~~i~~~~~~~t-~~-~pyq~e~sqg~l~~l~ 102 (946)
..|| +++++..|++++|...--. +.....|.|. ..+. .|.+. +.+.+ ++. .+ +|.. +....+++.
T Consensus 15 ~~~p--~~~~~~~~~~~~~~~~iyld~~a~~~~~~~--~tt~~~p~~~-~~~~~---~l~~~~~np~s---~~~~~~le~ 83 (431)
T TIGR01788 15 YRMP--EEEMPPDAAYQLIHDELSLDGNPRLNLATF--VTTWMEPEAR-KLMDE---TINKNMIDKDE---YPQTAEIEN 83 (431)
T ss_pred ccCC--CCCCCHHHHHHHHHHHhhhcCCcceeeeee--eCCCCCHHHH-HHHHH---HHhcCCCCccc---CccHHHHHH
Confidence 3566 7899999999999865322 2221223222 2222 44443 23332 111 11 3322 223348889
Q ss_pred HHHHHHHHHhCCC-C-cceE--EcccHHHHHHHHHHHhccc--c-----C---CCCEEEEcCCCCHHHHHHHHHhhcCCC
Q 002263 103 NFQTMIADLTGLP-M-SNAS--LLDEGTAAAEAMAMCNNIQ--K-----G---KKKTFIIASNCHPQTIDICITRADGFD 168 (946)
Q Consensus 103 e~q~~la~L~g~~-~-~~~s--l~~~~Ta~~ea~~la~~~~--~-----~---~gd~vvv~~~~Hps~~~~~~~~a~~~g 168 (946)
++++++++++|++ . ..+. +++|||.+....+.+.+.. + + .+.+|++++.+|+++.+.++. .|
T Consensus 84 ~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~----lg 159 (431)
T TIGR01788 84 RCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY----FD 159 (431)
T ss_pred HHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH----cC
Confidence 9999999999998 3 2343 4688884443322222210 0 0 124799999999999988643 46
Q ss_pred eEEEEeccc---------cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhC------CcEEEEE-ecCcc-----
Q 002263 169 IKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMA-TDLLA----- 225 (946)
Q Consensus 169 i~v~~~~~~---------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~------gal~~v~-a~~~a----- 225 (946)
+++++++++ +|++ ++++|++|+++.. |.+|.++|+++|+++|+++ |++++|+ ++..+
T Consensus 160 ~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~ 239 (431)
T TIGR01788 160 VELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFV 239 (431)
T ss_pred ceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHh
Confidence 777776542 3555 7788999999987 5699999999999999999 9999994 33211
Q ss_pred ccCCC-CCCCccceEEEecccccc-ccCCCCCCceEEEEEchh--hhhcCC--CceEeEeecCCCCcceEEecccccccc
Q 002263 226 LTILK-PPGELGADIVVGSAQRFG-VPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHI 299 (946)
Q Consensus 226 l~~l~-~~~~~GaDi~v~s~k~lg-~P~~~GGP~~g~l~~~~~--~~~~lp--~~~~G~s~d~~g~~~~~l~l~tre~~i 299 (946)
.+.+. +....|+|.++.++|||+ +| ++.|++++|++ +.+.+. +..+|. + ...+.+.. .
T Consensus 240 ~~~~~~~~~~~~~DSis~s~HK~~~~P-----~g~G~l~~r~~~~l~~~~~~~~~yl~~--~---~~~~t~~~------s 303 (431)
T TIGR01788 240 YPDLEWDFRLPRVKSINVSGHKYGLVY-----PGVGWVIWRDEEALPEELIFHVNYLGG--D---EPTFTLNF------S 303 (431)
T ss_pred CCCchhhcCCCCceEEEECchhccCCC-----CCcEEEEEeChHHcchhheecccccCC--C---CCCcceec------C
Confidence 11111 113468999999997764 44 35789999875 222221 112221 0 00011111 1
Q ss_pred cccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC-----C-
Q 002263 300 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA-----D- 372 (946)
Q Consensus 300 rre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~-----~- 372 (946)
|+ |+ ...+.... +..+|.+|++++.+++.+++++|.++|++.++++++.+ +.++.|+|+.+ +
T Consensus 304 R~--g~-------~al~~w~~--l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~ 372 (431)
T TIGR01788 304 RP--AN-------QVIAQYYN--FLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGY 372 (431)
T ss_pred ch--HH-------HHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCc
Confidence 11 00 11111111 47889999999999999999999999999966999875 56777888764 2
Q ss_pred -HHHHHHHHHHcCCeeeee-c------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 373 -AHAIASAAYKIEMNLRVV-D------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 -~~~v~~~L~~~GI~~~~~-~------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..++.++|.++||.+... . .-.+|+++....+++.+++|++.|+.
T Consensus 373 ~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~ 425 (431)
T TIGR01788 373 TLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA 425 (431)
T ss_pred CHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 578999999999975321 1 13579999999999999999999974
No 86
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.85 E-value=2.7e-19 Score=203.10 Aligned_cols=287 Identities=12% Similarity=0.149 Sum_probs=202.6
Q ss_pred CCcHHHHHHHHhCCcccc-cc-CCCh--hhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc-ccC
Q 002263 67 HVPPVILRNIMENPAWYT-QY-TPYQ--AEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKG 141 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t-~~-~pyq--~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~-~~~ 141 (946)
.+|..+.+.+.+ |+. .+ .|.. .+.+....+.+.++++.+++++|+++.++.+++|+|.+++.++.++.. ...
T Consensus 9 ~~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~ 85 (353)
T TIGR03235 9 PIDPAVAEAMLP---WLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQ 85 (353)
T ss_pred CCCHHHHHHHHH---HHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccc
Confidence 466666656553 221 11 2221 122334557788999999999999988899999999887776665431 111
Q ss_pred CC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHH
Q 002263 142 KK-KTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNA 210 (946)
Q Consensus 142 ~g-d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a 210 (946)
++ ++|+++..+||++...++.+ +..|++++.++. +++++ +++++++|+++++ |.+|.+.|+++|+++|
T Consensus 86 ~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~ 164 (353)
T TIGR03235 86 KGKKHIITSAIEHPAVLEPIRAL-ERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVL 164 (353)
T ss_pred CCCCeeeEcccccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHH
Confidence 44 78999999999999998764 446999988765 34555 6778999999987 6799999999999999
Q ss_pred HhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhc--CCCceEeEeecCCCCcc
Q 002263 211 HANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRM--MPGRIVGVSIDSSGKPA 287 (946)
Q Consensus 211 ~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~--lp~~~~G~s~d~~g~~~ 287 (946)
|++|++++||. .++++... +..++|+|+++++++|+.+| ||+|+++++++.... +.+.+.| +.
T Consensus 165 ~~~~~~~ivD~-a~~~g~~~~~~~~~~~D~~~~s~~K~~gp-----~g~g~l~~~~~~~~~~~~~~~~~~------~~-- 230 (353)
T TIGR03235 165 EAHEAFFHVDA-AQVVGKITVDLSADRIDLISCSGHKIYGP-----KGIGALVIRKRGKPKAPLKPIMFG------GG-- 230 (353)
T ss_pred HHcCCEEEEEc-hhhcCCccccccccCCCEEEeehhhcCCC-----CceEEEEEccCcccccccCceeeC------CC--
Confidence 99999999943 34555443 44678999999999555334 468999999875432 3322222 00
Q ss_pred eEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---CcC
Q 002263 288 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFD 364 (946)
Q Consensus 288 ~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~~ 364 (946)
+..+.+.+|+|+ ..++++.+++ .++ .+|++++.+++.+++++++++|++.| ++++.++ ...
T Consensus 231 ---------~~~~~~~gt~~~---~~~~al~~al--~~~-~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~ 294 (353)
T TIGR03235 231 ---------QERGLRPGTLPV---HLIVGMGEAA--EIA-RRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPH 294 (353)
T ss_pred ---------CcCccccCCCCh---HHHHHHHHHH--HHH-HhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCC
Confidence 112456788888 4555666665 333 35889999999999999999999887 9987432 223
Q ss_pred eEEEecCC--HHHHHHHHHHcCCeee
Q 002263 365 TVKVKCAD--AHAIASAAYKIEMNLR 388 (946)
Q Consensus 365 ~~~i~~~~--~~~v~~~L~~~GI~~~ 388 (946)
.++|..++ +.++.++|.+ ||.++
T Consensus 295 i~~~~~~~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 295 ILNFSIDGVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred EEEEEeCCcCHHHHHHHHhC-CeEEE
Confidence 45666565 7889999965 77765
No 87
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.85 E-value=1.6e-19 Score=204.78 Aligned_cols=326 Identities=13% Similarity=0.033 Sum_probs=221.9
Q ss_pred CCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceEEc-ccHHHHHHHHHHHh
Q 002263 60 GMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLL-DEGTAAAEAMAMCN 136 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~sl~-~~~Ta~~ea~~la~ 136 (946)
+.| |..+|+.+.+++.... +.+- ..-..++ -.+.+.+.++.+++|+|++.. ++.++ .+||.++++++.++
T Consensus 8 ~pG--P~~~~~~v~~a~~~~~~~~~~-~~hr~~~----f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l 80 (361)
T TIGR01366 8 GSG--PSKVRLEQLQALTTTAASLFG-TSHRQAP----VKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL 80 (361)
T ss_pred cCC--CcCCCHHHHHHHHhcCccccc-cCcCChH----HHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc
Confidence 556 6678888876655321 1100 0122333 247888999999999999644 67776 55999999887765
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---cccc-cCCCEeEEEEEc-CCCceeecchHHHHHHHH
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DIDY-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAH 211 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~l~~-i~~~t~~v~v~~-pn~~G~i~di~~i~~~a~ 211 (946)
- .++.++++.++|.+....+-.++...+ ++.+++.+ +++. +++++++|++++ +|.+|.+.|+++| +|
T Consensus 81 ~----~~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~ 152 (361)
T TIGR01366 81 I----EKKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EG 152 (361)
T ss_pred c----cccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---cc
Confidence 2 224556777888777666544332223 44555432 3444 567899998876 5899999999998 58
Q ss_pred hCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceE
Q 002263 212 ANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 289 (946)
Q Consensus 212 ~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~ 289 (946)
++|++++||+ ..+++..+ +..+ +|++++++ |.|+.| ||++++++++++++++.+...|.. +.+ +.
T Consensus 153 ~~g~~~iVDa-vqs~g~~~idv~~--~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~----~~p-~~ 219 (361)
T TIGR01366 153 SDDALVVIDA-TSGAGGLPVDIAE--TDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGR----WVP-EF 219 (361)
T ss_pred cCCCeEEEEc-CccccCCCCCHHH--CCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCC----CCc-hh
Confidence 9999999954 33555443 2232 89999999 545433 368889999998887754433210 111 23
Q ss_pred EecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CC--Cc--
Q 002263 290 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FF-- 363 (946)
Q Consensus 290 l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~--~~-- 363 (946)
+++... ...+.+.+|.|......++++.+++ .++..+ |++++.+|+.+++++++++|+++++++++. .. ..
T Consensus 220 ~d~~~~-~~~~~~~~t~~tp~i~~i~~l~~al--~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~ 296 (361)
T TIGR01366 220 LSLPTA-VDNSLKNQTYNTPAIATLALLAEQI--DWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQV 296 (361)
T ss_pred hhHHHH-HhccccCCCCCCchHHHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccc
Confidence 333222 1123457888888778888888887 666666 699999999999999999999997456653 11 11
Q ss_pred -CeEEEecCC--HHHHHHHHHHcCCeeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 364 -DTVKVKCAD--AHAIASAAYKIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 364 -~~~~i~~~~--~~~v~~~L~~~GI~~~~----~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+|++. ++ ..++.+.|.++||.+.. +.++.+|+|++.+||.+|+++++++|+.
T Consensus 297 v~~v~~~-~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 297 VGTIDFV-DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred eEEEECC-CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 234442 33 78899999999998743 2246799999999999999999999974
No 88
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.85 E-value=2.5e-19 Score=211.50 Aligned_cols=342 Identities=16% Similarity=0.154 Sum_probs=217.6
Q ss_pred CHHHHHHHHHHHHcCccCcCCcc-ccceeee-cCCC-cccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhh
Q 002263 457 TEHELLRYIHLLQSKELSLCHSM-IPLGSCT-MKLN-ATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 533 (946)
Q Consensus 457 se~e~~r~~~~l~~~~~~~~~~~-~~lGs~~-~~~~-~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~ 533 (946)
+-.++++.+.+.-.++.....+. .++|+-. .... +...+..+ ..++-+-... |.++++.+++.++.+|+|+++
T Consensus 61 ~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~~paila~~~a---~~~N~n~~~~-e~SP~~t~lE~~vi~~la~l~ 136 (608)
T TIGR03811 61 NMKDVLDELSSRLRTESVPWHSAGRYWGHMNSETLMPAILAYNYA---MLWNGNNVAY-ESSPATSQMEEEVGKEFATLM 136 (608)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccceEEECcCCCCHHHHHHHHHH---HHhCCCCCcc-ccCchHHHHHHHHHHHHHHHh
Confidence 67788888877554442222344 4567621 1111 11111100 0112111222 778899999999999999999
Q ss_pred CCCcc-cccCCchHHHHHHHHHHHHHHHH-----hcC-------------------------------------------
Q 002263 534 GFDSF-SLQPNAGAAGEYAGLMVIRAYHK-----ARG------------------------------------------- 564 (946)
Q Consensus 534 G~~~~-~l~~~sGa~ge~a~l~a~r~y~~-----~~G------------------------------------------- 564 (946)
|++.. ...+.+|+.+++.++.++|.... +.+
T Consensus 137 G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g 216 (608)
T TIGR03811 137 GYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSG 216 (608)
T ss_pred CCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccc
Confidence 99863 35567888889888888876320 000
Q ss_pred C-CCC-CEEEEcCCCCCCCHHHHHHcCC---EEEEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEeCCCc-cccccc
Q 002263 565 D-HHR-NVCIIPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEE 635 (946)
Q Consensus 565 ~-~~~-~~Ili~~saHg~~~~~a~~~G~---~vv~v~~~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn~-~G~~~~ 635 (946)
. ..+ .++++|.++|.+..+++.++|+ .++.||+|+++++|+++|+++|++. +..+.+|+.+.++| +|.||
T Consensus 217 ~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiD- 295 (608)
T TIGR03811 217 KDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVD- 295 (608)
T ss_pred cccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccC-
Confidence 0 001 1688999999999999999999 5999999999999999999999742 23467788888865 89999
Q ss_pred CHHHHHHHH---HHcCC--EEEEeccccccc-ccccC-----------------------------C-------CccCCC
Q 002263 636 GIDEICKII---HDNGG--QVYMDGANMNAQ-VGLTS-----------------------------P-------GYIGAD 673 (946)
Q Consensus 636 ~i~~I~~ia---~~~g~--ll~vD~a~~~a~-~gl~~-----------------------------p-------g~~GaD 673 (946)
||++|+++| +++|+ ++|||||..... ..+.. + +-.++|
T Consensus 296 pl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~AD 375 (608)
T TIGR03811 296 GIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAE 375 (608)
T ss_pred CHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCce
Confidence 799999999 67898 699999753211 01111 0 123699
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecc-cCCCCCCC--ccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lp~~--~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
.++.++||++.+|+++| .+++++. +.+.+... .+....+ ... ...+...+.++.. +..+++.|+.++.
T Consensus 376 SItvDpHK~g~~Py~~G-----~ll~Rd~~~~~~~~~~a~Yl~~~~~-~~p-~~~g~~~legSR~--ga~AlklW~~lr~ 446 (608)
T TIGR03811 376 SVTIDPHKMGYIPYSAG-----GIVIQDIRMRDVISYFATYVFEKGA-DIP-ALLGAYILEGSKA--GATAASVWAAHKV 446 (608)
T ss_pred EEEeCcccccccCCCeE-----EEEEeCHHHHHHHhcCcchhccccc-cCc-ccccccceecCCc--cHHHHHHHHHHHH
Confidence 99999999999998765 6777753 22222110 0000000 000 0000111222222 2346778999999
Q ss_pred H--cHhhHHHHHHHHHHHHHHHHHHHhcc--------CCeeeccCCCceeeeEEEecccccccCCCC----HHHHHHHHH
Q 002263 751 M--GSKGLTEASKIAILNANYMAKRLEKH--------YPILFRGVNGTVAHEFIVDLRGLKNTAGIE----PEDVAKRLM 816 (946)
Q Consensus 751 l--G~eGl~~~~~~~~~~a~~l~~~L~~~--------~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~----~~~i~~~L~ 816 (946)
+ |.+|+.++.++++++|+++.+.|++. +++... ..|.++.++|++.+ .|.+ ..++.+++.
T Consensus 447 l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~--~~pdlniV~Fr~~~----~g~~~l~~~n~ln~~i~ 520 (608)
T TIGR03811 447 LPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPL--TKPDFNMVDYVFNE----KGNDDLVKMNKLNHAFY 520 (608)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEec--CCCCcceEEEEEec----CCCccHHHHHHHHHHHH
Confidence 8 99999999999999999999999873 233101 12455666776542 1222 456666766
Q ss_pred HC
Q 002263 817 DY 818 (946)
Q Consensus 817 ~~ 818 (946)
++
T Consensus 521 ~~ 522 (608)
T TIGR03811 521 DY 522 (608)
T ss_pred Hh
Confidence 54
No 89
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.85 E-value=2.1e-19 Score=205.66 Aligned_cols=362 Identities=17% Similarity=0.178 Sum_probs=228.8
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCccccccc---ccCccccc---------cCCCCccccc
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP---VTWPSFAN---------IHPFAPADQA 515 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~---~~~~~f~~---------~~p~~p~e~~ 515 (946)
.+| +.|+++..+...+.+|+..|..-...-++.|- ...++. +.+.-|.- ..-.|| +.
T Consensus 29 ~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~ge-------re~rv~~~~~~~~~~~~~hgigr~~~l~~~q~-ka- 97 (444)
T TIGR03531 29 KIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGE-------REGRVFSKLVARRHYRFCHGIGRSGDLVAPQP-KA- 97 (444)
T ss_pred cCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCc-------ccceeechhhhhcccceecCCCCcccccccCc-cc-
Confidence 457 68999999999999999988553332233331 111110 11111211 223455 22
Q ss_pred cc---HHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 516 QG---YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 516 qG---~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.| ...+..+++.++++++|.+. ..+.+++|+ |. +..+++.+.. .++ .++++||+|..+|.+..+++.++|+
T Consensus 98 ~gss~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~T-g~-al~laL~alr-~~~-~~gd~VI~p~~th~S~~kAi~~~G~ 173 (444)
T TIGR03531 98 AGSSLLYKLTNKLVKDFLKLLGLRSIKSAFVVPLAT-GM-SLSLCLSALR-HKR-PKAKYVIWPRIDQKSCIKAISTAGF 173 (444)
T ss_pred cCccHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHH-HH-HHHHHHHHcC-CcC-CCCCEEEEECcChHHHHHHHHHcCC
Confidence 23 45778889999999999982 223344444 21 2333333211 111 1357899999999999999999999
Q ss_pred EEEEEcC--C-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCccc--ccccCHHHHHHHHHHcCCEEEEeccccccccc--
Q 002263 591 KIVSVGT--D-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHG--VYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-- 663 (946)
Q Consensus 591 ~vv~v~~--~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G--~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g-- 663 (946)
+++.+++ + +++.+|+++|+++|+...+++.++++++|++++ ..+ |+++|+++|++||+++|+|+|+.....-
T Consensus 174 ~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~d-dL~eIa~la~k~gI~lIvDaAyg~~~~~~~ 252 (444)
T TIGR03531 174 EPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPD-DIEEIAKICANYDIPHIVNNAYGLQSNKYM 252 (444)
T ss_pred eEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchh-CHHHHHHHHHHcCCEEEEECcCcCcChhhh
Confidence 9999995 3 458899999999998432266777888887654 566 8999999999999999999987521100
Q ss_pred -ccCC-CccC-CCEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 664 -LTSP-GYIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 664 -l~~p-g~~G-aDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
+..+ ...| +|++++++||+|.+|.+ .|++.++ +++.+.+... + . +... ..
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~~-------y-------~-g~~~------~s 306 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISKS-------Y-------P-GRAS------AS 306 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHHh-------c-------c-CCCC------Ch
Confidence 1112 2344 79999999999987633 3466664 4444433110 0 0 0001 11
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---C-CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---Y-PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~-~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
.+..+|+.+..+|.+|+++..++..++++++.++|+++ + +.+...+.++.. +.+.+..+. +.+...+...|
T Consensus 307 ~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is--~~~~~~~~~---~~~~~~~g~~l 381 (444)
T TIGR03531 307 PSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPIS--SAMTLSTLK---GKDPTMLGSML 381 (444)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCcee--EEEeccccc---ccCHHHHHHHH
Confidence 23567899999999999999999999999999999874 1 112222223332 334443321 45678888889
Q ss_pred HHCCcccC-----CC-------C---CCC------CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 816 MDYGFHGP-----TM-------S---WPV------PGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 816 ~~~Gi~~~-----~~-------~---~p~------~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
..+++..+ .- . |.. ...|.+....-.+++|||.|++.|+++
T Consensus 382 ~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 382 YSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred HhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 88877431 11 1 110 023444444557899999999999764
No 90
>PLN02271 serine hydroxymethyltransferase
Probab=99.85 E-value=1.7e-19 Score=206.40 Aligned_cols=311 Identities=16% Similarity=0.132 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHhhCCCc----ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH---------HH
Q 002263 520 EMFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---------AA 586 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~----~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~---------a~ 586 (946)
++..-.++..+++||.+. ++++|.||+.++.++++++. .++|+|+..+..||.|... +.
T Consensus 194 ~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs 265 (586)
T PLN02271 194 QIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVS 265 (586)
T ss_pred HHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhcccccccccccc
Confidence 344445677888999886 78999999999988777663 3678999888888877542 24
Q ss_pred HcCCEEEEEc--CC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccc
Q 002263 587 MCGMKIVSVG--TD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 663 (946)
Q Consensus 587 ~~G~~vv~v~--~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g 663 (946)
..|+.+..++ ++ ++|.+|+++|++.+.+ .++++|++....+. ..- |+++|+++|+++|+++++|+||..++..
T Consensus 266 ~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Sayp-r~~-D~~~i~eIAdevGA~LmvD~AH~aGLIa 341 (586)
T PLN02271 266 GASIFFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYP-REW-DYARFRQIADKCGAVLMCDMAHISGLVA 341 (586)
T ss_pred cccceEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhcc-CcC-CHHHHHHHHHHcCCEEEEECcccccccc
Confidence 4565555554 64 4699999999996542 68888888664443 222 7999999999999999999999755542
Q ss_pred c---cCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCC----CCCC-CCCcccCcc
Q 002263 664 L---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE----KSQP-LGTIAAAPW 735 (946)
Q Consensus 664 l---~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~----~~~~-~~~i~~~~~ 735 (946)
. ..|.. ++|+++++.|||| .||..|+|.+++...+...+...++..+.-.++ -.++ .+.+.+.+.
T Consensus 342 ~g~~~sP~~-~aDvvt~TTHKtL------rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGph 414 (586)
T PLN02271 342 AKECVNPFD-YCDIVTSTTHKSL------RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPH 414 (586)
T ss_pred cCcCCCCCc-CCcEEEeCCcccC------CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChh
Confidence 2 23433 6999999999999 467668899987766555444333321100000 0011 122222222
Q ss_pred chhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHH
Q 002263 736 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
.+. +++.|.+. .......+++.+++.+.||+.|++.|.+. |.++.. ++-.|.+++|+++ .|++...+.+.
T Consensus 415 n~~-IAalAval-kea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~g---gTdnHlvLvDl~~----~g~~G~~ae~~ 485 (586)
T PLN02271 415 NNH-IAALAIAL-KQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTG---GTDNHLLLWDLTT----LGLTGKNYEKV 485 (586)
T ss_pred HHH-HHHHHHHH-HHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeC---CCCcceeeecCcc----cCCCHHHHHHH
Confidence 222 33334333 33333456899999999999999999775 888753 3456889999875 36788899999
Q ss_pred HHHCCcccCCCC--C---C-CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHH
Q 002263 815 LMDYGFHGPTMS--W---P-VPGTLMIEPTESES----KEELDRYCDALISIRE 858 (946)
Q Consensus 815 L~~~Gi~~~~~~--~---p-~~~~lri~~t~~~t----~~eid~~~~aL~~i~~ 858 (946)
|.+.||.+.... + | .++.|||...+.++ ++|++++.+.+.++++
T Consensus 486 Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 486 CEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 999999875322 1 1 35789998877654 4788888888888776
No 91
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.85 E-value=2.7e-19 Score=205.51 Aligned_cols=306 Identities=15% Similarity=0.166 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC--C
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT--D 598 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~--~ 598 (946)
.+.++++.+++++|.+.+.+ .+++++|+.+++ +.+. .++++|+++...|.+....+...|++++.++. +
T Consensus 64 ~~~~l~~~lA~~~g~~~~~~-~~g~t~a~~~al---~~l~-----~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~ 134 (387)
T PRK09331 64 PIADFHEDLAEFLGMDEARV-THGAREGKFAVM---HSLC-----KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGY 134 (387)
T ss_pred HHHHHHHHHHHHhCCCcEEE-eCCHHHHHHHHH---HHhc-----CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccC
Confidence 47789999999999987544 566666654443 3321 25688999998888877778899999999998 6
Q ss_pred CCCCCCHHHHHHHHHhc----CCCeEEEEEeCCCc-ccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCC
Q 002263 599 AKGNINIEELRKAAEAN----RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~----~~~t~~vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
+++.+|+++++++++++ .+++++|++++|++ +|.+. |+++|+++||++|+++++|+++..+...+ ....+|+|
T Consensus 135 ~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~-~l~~I~~la~~~g~~livD~a~~~g~~~~-~~~~~g~D 212 (387)
T PRK09331 135 PEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA-DAKKVAKVAHEYGIPFLLNGAYTVGRMPV-DGKKLGAD 212 (387)
T ss_pred cCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc-cHHHHHHHHHHcCCEEEEECCcccCCcCC-CHHHcCCC
Confidence 67889999999999743 24789999999964 89998 79999999999999999999875322121 22357999
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
++++++||+|+ +++|+|++++++++.+.+..... .+... ... .+.++...... ..+++.+..+-.
T Consensus 213 ~~~~s~~K~l~-----~~~~~G~l~~~~~~i~~~~~~~~----~~~~~-~~~---~~~~~~~~~~~--~~~~aal~~~~~ 277 (387)
T PRK09331 213 FIVGSGHKSMA-----ASAPSGVLATTEEYADKVFRTSR----KFGVK-EVE---LLGCTLRGAPL--VTLMASFPHVVE 277 (387)
T ss_pred EEEeeCccccc-----CCCCEEEEEECHHHHhhcccccC----CCccc-cee---eeceecCchHH--HHHHHHHHHHHH
Confidence 99999999995 44678999999876655421100 00000 000 00000000111 111222222211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEeccccc---ccCCCCHHHHHHHHHHCCcccCCCCCC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSWP 828 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~---~~~g~~~~~i~~~L~~~Gi~~~~~~~p 828 (946)
. + +..++...++++++++|+++ +++...++.. .+...++.+.+. ...+.++..+.++|.++||..-. +
T Consensus 278 ~-~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~ 350 (387)
T PRK09331 278 R-V-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRN--HDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK---P 350 (387)
T ss_pred H-H-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCc--CCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc---c
Confidence 1 1 23344567888999999875 4442111111 111234433110 01233557799999999997311 2
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..+.++...+..+|++|+++++++|++++++
T Consensus 351 ~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 351 GATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred CCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 2234444444447999999999999998765
No 92
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.85 E-value=3.2e-19 Score=203.77 Aligned_cols=308 Identities=14% Similarity=0.130 Sum_probs=198.2
Q ss_pred cHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 517 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
|+...+.++++.+++++|++.+.+ .++|+++..+++.++. +++++|+++...|.+....+++.|++++.+|
T Consensus 48 ~~~~~~~~~~e~lA~~~g~~~~~i-~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~ 118 (370)
T TIGR02539 48 ITKPPIHDFLEDLAEFLGMDEARV-THGAREGKFAVMHALC--------KEGDWVVLDGLAHYTSYVAAERAGLNVKEVP 118 (370)
T ss_pred ccchHHHHHHHHHHHHhCCCceEE-ECChHHHHHHHHHHhh--------CCCCEEEECCcccHHHHHHHHHcCCEEEEEe
Confidence 334456678888999999987654 4667666654444332 2468899988888777777889999999999
Q ss_pred CCC--CCCCCHHHHHHHHHhc----CCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCC
Q 002263 597 TDA--KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPG 668 (946)
Q Consensus 597 ~~~--~g~~D~e~L~~~i~~~----~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg 668 (946)
.++ ++.+|+++|++++++. .+++++|++++|+ .+|.+. |+++|+++||++|+++++|+|+..+ .+. ...
T Consensus 119 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~-~l~~i~~la~~~~~~livDea~~~g--~~~~~~~ 195 (370)
T TIGR02539 119 HTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP-DAGKVAKVCREKGVPLLLNCAYTVG--RMPVSAK 195 (370)
T ss_pred cCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc-CHHHHHHHHHHcCCeEEEECccccC--CcCCCHH
Confidence 863 4789999999999642 1367889999995 689998 8999999999999999999997643 222 223
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
.++.|+++.++||+|+. |.++|++++++++.+.+......+. .........++. ..+ +..+++.+
T Consensus 196 ~~~~di~v~s~sK~~~~-----~g~~G~l~~~~~~i~~l~~~~~~~~-------~~~~~~~~~~~~-~~~--~~~~~~al 260 (370)
T TIGR02539 196 EIGADFIVGSGHKSMAA-----SGPCGVLGMSEEWEDIVLRKSRYSP-------VKEVELLGCTSR-GAP--IVTMMASF 260 (370)
T ss_pred HcCCCEEEeeCcccccC-----CCCEEEEEECHHHHhhhcccccCCc-------cceeeeeccccc-ccH--HHHHHHHH
Confidence 56899999999999952 2348999999887766542210000 000000001110 011 11222222
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccc---cCCCCHHHHHHHHHHCCcc-cC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---TAGIEPEDVAKRLMDYGFH-GP 823 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~---~~g~~~~~i~~~L~~~Gi~-~~ 823 (946)
... .+.+.+ .++...++++|+++|++. +++....+. ..+-+.++++.... ....+...+.++|.++||. +.
T Consensus 261 ~~~-~~~l~~-~~~~~~~~~~l~~~L~~~g~~~~~~~~s--~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir 336 (370)
T TIGR02539 261 PHV-VERVKR-WDEEVKKTRWFVAELEDIGFIQLGQKPK--EHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR 336 (370)
T ss_pred HHH-HHHHHH-HHHHHHHHHHHHHHHHhCCcEEEccCCC--cCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc
Confidence 221 222222 234456678999999885 554211111 12223355431100 0012346799999999997 33
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 824 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 824 ~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
++..+.+||++. ..|++|+++++++|++++++
T Consensus 337 ---~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 337 ---SGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ---CCcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 233468999974 57999999999999988654
No 93
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.85 E-value=1.1e-19 Score=199.86 Aligned_cols=322 Identities=17% Similarity=0.184 Sum_probs=202.4
Q ss_pred eecCCCCCCCCCcHHHHHHHHhCCcccccc--CCChhhhhhhH--HHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHH
Q 002263 57 SFIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQAEIAQGR--LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 132 (946)
Q Consensus 57 ~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~--~pyq~e~sqg~--l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~ 132 (946)
-|++.+..+ .+|+.|.+.+. +|++.| .|-.. +-|+ ..++.++|+.+|+|+|+++.++++++++|.++...
T Consensus 45 vyld~~at~-p~~~~Vldam~---~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 45 VYLDNQATG-PMDPRVLDAML---PYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred EEEecCcCC-CCCHHHHHHHH---HHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 466677654 46777666666 345544 33322 2333 34589999999999999999999999999444333
Q ss_pred HHHhccccCCCC----EEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cCCCEeEEEEEcC-CCce
Q 002263 133 AMCNNIQKGKKK----TFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYP-GTEG 198 (946)
Q Consensus 133 ~la~~~~~~~gd----~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~~~t~~v~v~~p-n~~G 198 (946)
+....+. .++ +||+.+.+||++...|+.+. ..|++++.+|++ .++. |+++|++|.+.+. |..|
T Consensus 119 l~~v~~~--~~~~~~k~iitl~~eH~~v~~s~~~l~-~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~g 195 (428)
T KOG1549|consen 119 LKGVARF--FGDKTKKHIITLQTEHPCVLDSCRALQ-EEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIG 195 (428)
T ss_pred HHHhhcc--ccccccceEEEecccCcchhHHHHHHH-hcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCcc
Confidence 3332222 233 89999999999999998864 468999998873 3455 8899999999886 6799
Q ss_pred eecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchh--hhhcCCCce
Q 002263 199 EVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQE--YKRMMPGRI 275 (946)
Q Consensus 199 ~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~--~~~~lp~~~ 275 (946)
++.|++||+++|++.|+.|++++ .++.|.++ +..++|+|+++.++|+| ||.|++|+||||++ ..+.. +.+
T Consensus 196 v~~Pv~EI~~icr~~~v~v~~Da-AQavG~i~vDV~eln~D~~s~s~HK~-----ygp~~iGaLYvr~~~~~~~~~-p~~ 268 (428)
T KOG1549|consen 196 VLQPVKEIVKICREEGVQVHVDA-AQAVGKIPVDVQELNADFLSISAHKI-----YGPPGIGALYVRRKRPRLRVE-PPL 268 (428)
T ss_pred ccccHHHHHHHhCcCCcEEEeeh-hhhcCCccccHHHcCchheeeecccc-----cCCCcceEEEEccCCCccccc-Ccc
Confidence 99999999999999999999943 34667653 67899999999999665 45577999999972 22222 344
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCC
Q 002263 276 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGT 354 (946)
Q Consensus 276 ~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~ 354 (946)
.| |.+ -| ..+.||.+...+-+ +-+++-..-....+.+.+..+ +...+..++.. ...
T Consensus 269 ~G------Ggq-------~r----~~rsGT~~~~~~~~---~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~ 325 (428)
T KOG1549|consen 269 SG------GGQ-------ER----GLRSGTVATPLAVG---LGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPE 325 (428)
T ss_pred cC------Ccc-------cc----ccccCCcCchhhhh---hHHHHHHHHhhcchhHHHHHH---HHHHHHHHHhhhCch
Confidence 44 211 11 13457777643333 333331111112233333333 45555555543 211
Q ss_pred EEEcCC-C--CcCeEEEecC---C---HHHHHHHHHHcCCee-----e--e----------ecCCeEEEEeccCCCHHHH
Q 002263 355 VEVQGL-P--FFDTVKVKCA---D---AHAIASAAYKIEMNL-----R--V----------VDSNTVTASFDETTTLEDV 408 (946)
Q Consensus 355 ~~~~~~-~--~~~~~~i~~~---~---~~~v~~~L~~~GI~~-----~--~----------~~~~~lris~~~~~t~edi 408 (946)
+.+.+. + ....+.|.++ + ..+..+....-|..+ . . .....||+|+.-+||.+|+
T Consensus 326 ~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di 405 (428)
T KOG1549|consen 326 VTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDI 405 (428)
T ss_pred hhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHH
Confidence 333321 1 1123444433 1 111111111112111 0 0 0146799999999999999
Q ss_pred HHHHHHHhC
Q 002263 409 DKLFIVFAG 417 (946)
Q Consensus 409 d~ll~~l~~ 417 (946)
+++.+.+..
T Consensus 406 ~~~~~~i~~ 414 (428)
T KOG1549|consen 406 DYLVDAIKK 414 (428)
T ss_pred HHHHHHHHH
Confidence 999999874
No 94
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.85 E-value=2.1e-19 Score=207.25 Aligned_cols=320 Identities=11% Similarity=0.041 Sum_probs=213.4
Q ss_pred cHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcCCEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKI 592 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G~~v 592 (946)
+..+++.++++++++++|.+. ..+.+++|+++.+++ +... ..++++||+++..|.++. ..++..|+++
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a---~~~~-----~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v 110 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESA---LTNT-----LSPGDKVVSFRIGQFSLLWIDQMQRLNFDV 110 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHH---HHhc-----CCCCCEEEEeCCCchhHHHHHHHHHcCCce
Confidence 456778899999999999864 346666666544332 3221 135689999887665543 3467789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcC-CCeEEEEEeCC-CcccccccCHHHHHHH--HHHcCCEEEEecccccccccc-cCC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKI--IHDNGGQVYMDGANMNAQVGL-TSP 667 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~i~~I~~i--a~~~g~ll~vD~a~~~a~~gl-~~p 667 (946)
+.++.+.++.+|+++++++++.+. +++++|+++++ |.+|++. |+++|+++ ||++|+++++|+++. ++.. ...
T Consensus 111 ~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~g~~~vvD~v~s--~g~~~id~ 187 (401)
T PLN02409 111 DVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN-DLAGVRKLLDCAQHPALLLVDGVSS--IGALDFRM 187 (401)
T ss_pred EEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC-CHHHHHHHHhhhccCcEEEEEcccc--cCCccccc
Confidence 999987766789999999997321 27899999987 5789998 79999999 999999999999864 3332 123
Q ss_pred CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC-CccccCCCCCCC-C-CCCCCC-CcccCccchhhHHHH
Q 002263 668 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPAP-E-KSQPLG-TIAAAPWGSALILPI 743 (946)
Q Consensus 668 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~-~~v~~~~d~~~~-~-~~~~~~-~i~~~~~g~~~~~~~ 743 (946)
.++|+|+++.+.||||+.| ||+|++++++++.+.+.. .......++... . .+.... .. |. +......
T Consensus 188 ~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-Tp---~~~~~~a 258 (401)
T PLN02409 188 DEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPY-TP---SIQLLYG 258 (401)
T ss_pred cccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCC-Cc---cHHHHHH
Confidence 5689999999999999643 678999999776544321 100000111000 0 000000 11 11 1111222
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 821 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~ 821 (946)
..+.+..+..+|+.++.++...+++++.+.|++. +++..+.+.........+.++ .+++..++.++|. ++|+.
T Consensus 259 l~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p-----~~~~~~~l~~~l~~~~~i~ 333 (401)
T PLN02409 259 LRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVP-----EGIDSAEIVKNAWKKYNLS 333 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCC-----CCCCHHHHHHHHHHhCCEE
Confidence 3344555556778888888889999999999875 554322111111112234443 3578889998886 67998
Q ss_pred cCCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 822 ~~~~~~p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+..-..+ ....+||+....++.+++.+++++|.+++.++.
T Consensus 334 i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 334 LGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred EEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 6543334 357899999999999999999999999877643
No 95
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.85 E-value=4.1e-19 Score=202.50 Aligned_cols=314 Identities=12% Similarity=0.108 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCE-EEEcCCCCCCC-HHHHHHcCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNV-CIIPVSAHGTN-PATAAMCGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~-Ili~~saHg~~-~~~a~~~G~~v 592 (946)
..+.+.++++.+++++|.+. ..+.+++|++|..+++.++. . ++++ |++....|+.. ...++..|+++
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~----~----~~~~vlv~~~~~~~~~~~~~a~~~g~~~ 104 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV----P----KDGKLLVVINGAYGARIVQIAEYLGIPH 104 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC----C----CCCeEEEEeCChhhHHHHHHHHHcCCce
Confidence 45678899999999999974 23455667766654443331 1 2344 44455555543 23467899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCcc
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 670 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~ 670 (946)
+.+++++++.+|+++++++++++ ++++.+.++++ |.+|+.. |+++|+++||++|++++||+++. ++... ...++
T Consensus 105 ~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~i~~I~~l~~~~g~~livD~~~~--~g~~~~~~~~~ 180 (363)
T TIGR02326 105 HVVDTGEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILN-PIEAVAKLAHRHGKVTIVDAMSS--FGGIPIDIAEL 180 (363)
T ss_pred EEEeCCCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccC-cHHHHHHHHHHcCCEEEEEcccc--ccCcccchhhc
Confidence 99999888999999999999743 35566766665 5689998 79999999999999999998764 33321 23467
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCC----CCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG----IPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d----~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
++|++++++||+|+ |+||+|++++++++...+.....+...+ +..............+ .....+..+
T Consensus 181 ~~D~~~~s~~K~l~-----~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~----~~~~~al~~ 251 (363)
T TIGR02326 181 HIDYLISSANKCIQ-----GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSP----THVVHAFAQ 251 (363)
T ss_pred CccEEEecCccccc-----cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCc----HHHHHHHHH
Confidence 99999999999994 5578999999876554432111110000 0000000000011111 111222233
Q ss_pred HHHHHcHh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeecc-CCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 747 YIAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRG-VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 747 ~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~-~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
.+..+..+ |+.++.++...+++++.+.|++. +.+..+. ...+. ...+.++. ....+..++.+.|.++||.+.
T Consensus 252 al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~v~~~L~~~gi~v~ 326 (363)
T TIGR02326 252 ALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPI--ITSFYSPE---DPDYRFADFYQRLKEQGFVIY 326 (363)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCce--EEEEECCC---CCCCCHHHHHHHHHHCCEEEE
Confidence 44444444 47777788889999999999875 5443211 01111 12344331 002467889999999999874
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 824 TMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 824 ~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
....+..+.+||++...++.+|+++++++|++++
T Consensus 327 ~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 327 PGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred CCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 3211124789999877789999999999998875
No 96
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=3.8e-19 Score=194.76 Aligned_cols=318 Identities=22% Similarity=0.321 Sum_probs=224.8
Q ss_pred ccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHH
Q 002263 478 SMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVI 556 (946)
Q Consensus 478 ~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~ 556 (946)
+...||+|.+++..+...+.... ... .+-|.. +...++.+.|+++++ ++.+ ++.|||+.++++++..+
T Consensus 52 av~~lGH~hP~iv~al~~Q~~kl-~h~-sn~~~~--------~~~~~la~~L~~~s~~~d~v-ff~NSGaEA~EaAiKlA 120 (404)
T COG4992 52 AVNNLGHCHPALVEALKEQAEKL-WHV-SNLFYN--------EPQAELAEKLVELSPFADRV-FFCNSGAEANEAALKLA 120 (404)
T ss_pred eeeccCCCCHHHHHHHHHHHHHh-hhc-ccccCC--------hHHHHHHHHHHhhCccccEE-EEcCCcHHHHHHHHHHH
Confidence 45578999888777777663211 111 122221 224478899999997 5554 77899999999999999
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcC-------C-----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEE
Q 002263 557 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------M-----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLM 623 (946)
Q Consensus 557 r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G-------~-----~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vv 623 (946)
|.|.. +. .+.+|| .-.+.||....+....| + .++.+|+ -|+++++++|+ ++|++|+
T Consensus 121 Rk~~~--~~-~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-----nDi~al~~ai~---~~taAvi 189 (404)
T COG4992 121 RKYTG--DP-EKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-----NDIEALEAAID---EDTAAVI 189 (404)
T ss_pred HHHcC--CC-CCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----CCHHHHHHHhc---cCeEEEE
Confidence 98853 22 344565 56888997766533221 1 2555665 48999999998 7999999
Q ss_pred EeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEEEeCCCcccccCCCCCC
Q 002263 624 VTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG 691 (946)
Q Consensus 624 vt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~hK~f~~P~g~GG 691 (946)
+..- ...|++.+ .++++.++|++||+++|+|.. |.|+.+.|++ -+||++. .|.++ ||
T Consensus 190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEV----QtG~GRTGk~fA~e~~gV~PDI~tl--aK~Lg-----GG 258 (404)
T COG4992 190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEV----QTGLGRTGKLFAYEHYGVEPDILTL--AKALG-----GG 258 (404)
T ss_pred EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecc----ccCCCccchHHHHHHhCCCCCEEEe--ecccc-----CC
Confidence 9864 56788753 489999999999999999986 6788898864 3799887 48873 55
Q ss_pred CcceeEEEecccCCCC-CCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHH
Q 002263 692 PGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYM 770 (946)
Q Consensus 692 Pg~G~i~~~~~l~~~l-p~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l 770 (946)
-.+|.+.+++.....+ ||. + -+| +.|+.+.++.+.+.+..+-++++.+.++ ....||
T Consensus 259 ~PigA~la~~~~~~~~~~G~----------H--------gST-fGGNpLacAv~~a~l~~l~~e~ll~~v~---~~g~~~ 316 (404)
T COG4992 259 FPIGAMLATEEIASAFTPGD----------H--------GST-FGGNPLACAVALAVLEVLLEEGLLENVR---EKGEYL 316 (404)
T ss_pred ccceeeEEchhhhhcCCCCc----------c--------cCC-CCcCHHHHHHHHHHHHHHcchhHHHHHH---HHHHHH
Confidence 6788888775544433 221 1 122 5578888889999999999988776554 678899
Q ss_pred HHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHH
Q 002263 771 AKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEE 845 (946)
Q Consensus 771 ~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~e 845 (946)
.++|+++ |.+. ..|. | .+.- +.+.. ...+.++.+.|.++|+.+.... ++.+|+.|....|++|
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~-G-LmiG--iel~~-----~~~a~~~~~~~~~~gvL~~~a~---~~ViR~~PpL~i~~ee 384 (404)
T COG4992 317 LQRLRELKRRYPLVKEVRGR-G-LMIG--IELKE-----PYRARDIVRALREEGVLVLPAG---PNVIRFLPPLVITEEE 384 (404)
T ss_pred HHHHHHHhhcCCceeeeecc-e-eEEE--EEecC-----cccHHHHHHHHHHCCeEEecCC---CCeEEecCCccCCHHH
Confidence 9999875 4422 2221 2 2211 22221 1247899999999999875433 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 002263 846 LDRYCDALISIREEIAQ 862 (946)
Q Consensus 846 id~~~~aL~~i~~e~~~ 862 (946)
+|..+++|+++++....
T Consensus 385 i~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 385 IDEALDALERALAAASA 401 (404)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999876543
No 97
>PLN03032 serine decarboxylase; Provisional
Probab=99.84 E-value=7.2e-19 Score=198.21 Aligned_cols=279 Identities=14% Similarity=0.046 Sum_probs=193.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcce--EEcccHHHHHHHHHHHhcccc--CCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNA--SLLDEGTAAAEAMAMCNNIQK--GKKKTFIIASNCHPQTIDICITRADGFDIK 170 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~--sl~~~~Ta~~ea~~la~~~~~--~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~ 170 (946)
..+.++..+..+++|+|+|+++..+ .+++||| ||.++++...+ .++.+|+++..+|+|+.+.++.+ |++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGT---EaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l----g~~ 134 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGT---EGNLHGILVGREVFPDGILYASRESHYSVFKAARMY----RME 134 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchH---HHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHc----CCC
Confidence 4567888999999999999987654 8899998 55554443211 14568999999999999987653 344
Q ss_pred EEEecc--------ccccc-cCC---CEeEEEEEcC-CCceeecchHHHHHHHHhCC-----cEEEEEecCccccCCC--
Q 002263 171 VVVSDL--------KDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-----VKVVMATDLLALTILK-- 230 (946)
Q Consensus 171 v~~~~~--------~~l~~-i~~---~t~~v~v~~p-n~~G~i~di~~i~~~a~~~g-----al~~v~a~~~al~~l~-- 230 (946)
++.+++ ++|++ +++ ++.+|+++.. |.+|.++|+++|+++|+++| ++++|++- ++.+.++
T Consensus 135 ~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA-~gg~~~p~~ 213 (374)
T PLN03032 135 AVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGA-LFGLMMPFV 213 (374)
T ss_pred CeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEcc-chhhhhhcc
Confidence 444433 45666 644 4778888876 56999999999999999997 48999431 1222221
Q ss_pred --C---CCCccceEEEeccccccc-cCCCCCCceEEEEEchhhhhcCCCc--eEeEeecCCCCcceEEeccccccccccc
Q 002263 231 --P---PGELGADIVVGSAQRFGV-PMGYGGPHAAFLATSQEYKRMMPGR--IVGVSIDSSGKPALRVAMQTREQHIRRD 302 (946)
Q Consensus 231 --~---~~~~GaDi~v~s~k~lg~-P~~~GGP~~g~l~~~~~~~~~lp~~--~~G~s~d~~g~~~~~l~l~tre~~irre 302 (946)
. ....++|.++.++|||++ |++ +|++++|+++.+.+... .++ ...+.+.
T Consensus 214 ~~~~~~~~~~~vDSis~s~HK~~g~P~g-----~G~ll~r~~~~~~~~~~~~Yl~-------~~d~ti~----------- 270 (374)
T PLN03032 214 SRAPEVTFRKPIGSVSVSGHKFLGCPMP-----CGVALTRKKHVKALSQNVEYLN-------SRDATIM----------- 270 (374)
T ss_pred CCCcccCCCcCCcEEEECcccccCCCcC-----eEEEEEEchhhHhhccCCcccC-------CCCCccc-----------
Confidence 0 123579999999966654 754 78899998776655211 110 0001111
Q ss_pred ccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHH
Q 002263 303 KATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYK 382 (946)
Q Consensus 303 ~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~ 382 (946)
||-+-. ..+++-++ +.++|.+|++++.+++.++++||.++|++.| ++++..|...+|.|..+.... + .
T Consensus 271 -gSR~g~---~~l~~w~~--l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p~~~~V~f~~~~~~~----~-~ 338 (374)
T PLN03032 271 -GSRNGH---APLYLWYT--LRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNELSSTVVFERPMDEA----F-I 338 (374)
T ss_pred -CCCchH---HHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECCCceEEEEcCCCcHh----H-h
Confidence 111111 11122222 5899999999999999999999999999987 887766666678777653222 2 2
Q ss_pred cCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 383 IEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 383 ~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+|+.+... ...++++++..+|++.+|+|++.|+.
T Consensus 339 ~~w~l~~~-~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 339 KKWQLACE-GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred heeeeccc-CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 57877753 46899999999999999999999864
No 98
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.84 E-value=1.5e-18 Score=198.31 Aligned_cols=320 Identities=14% Similarity=0.161 Sum_probs=214.5
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCC--cceEEcccHHHHHHHHHHH
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMC 135 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~--~~~sl~~~~Ta~~ea~~la 135 (946)
+.+.| |..+++.+.+.+... | . .+.++ ..+.+.++++.+++++|.+. ..+.++.+||.++++++.+
T Consensus 8 ~~~pg--P~~~~~~~~~a~~~~--~-~---~~~~~----~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~ 75 (368)
T PRK13479 8 LLTPG--PLTTSRTVREAMLRD--W-G---SWDDD----FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGS 75 (368)
T ss_pred eecCC--CCCCCHHHHHHhCCC--C-C---CCChH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHh
Confidence 44677 445777777665542 3 1 12222 22567889999999999965 3466789999998888777
Q ss_pred hccccCCCCEEEEcCC-CCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cC--CCEeEEEEEcC-CCceeecc
Q 002263 136 NNIQKGKKKTFIIASN-CHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KS--GDVCGVLVQYP-GTEGEVLD 202 (946)
Q Consensus 136 ~~~~~~~gd~vvv~~~-~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~--~~t~~v~v~~p-n~~G~i~d 202 (946)
+. . ++++|++... .++... ...++..|++++.++.+ ++++ +. ++++.|++.+| |.+|.+.|
T Consensus 76 l~-~--~~~~vlv~~~~~~~~~~---~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 76 LV-P--RDGKVLVPDNGAYGARI---AQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred cc-C--CCCeEEEEeCCchHHHH---HHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 63 2 6777777654 444432 23355678888887652 3444 43 45678888888 57999999
Q ss_pred hHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEee
Q 002263 203 YGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 280 (946)
Q Consensus 203 i~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~ 280 (946)
+++|+++||++|++++|| ..++++.. .+..++++|++++++ |+|+ |+||+||+++++++++.+.....
T Consensus 150 ~~~i~~l~~~~~~~livD-a~~~~g~~~~~~~~~~~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~---- 219 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVD-AMSSFGAIPIDIAELGIDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSR---- 219 (368)
T ss_pred HHHHHHHHHHcCCEEEEE-cccccCCccccccccCceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCC----
Confidence 999999999999999996 34455543 244678999999998 6674 44678999999988877643211
Q ss_pred cCCCCcceEEeccccccccccc---ccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 002263 281 DSSGKPALRVAMQTREQHIRRD---KATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 281 d~~g~~~~~l~l~tre~~irre---~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
.+.+++........+. .-|+|+ ..++++.+++ .++..+ |++++.+++.++++++++.|+++| ++
T Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~t~~~---~~~~~l~~al--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 287 (368)
T PRK13479 220 ------SLSLDLYDQWAYMEKTGQWRFTPPT---HVVAAFYQAL--LELEEEGGVPARGARYANNQRTLVAGMRALG-FE 287 (368)
T ss_pred ------CeeecHHHHHhhhcccCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 1222211000000000 114444 3455555555 333333 588888999999999999999998 88
Q ss_pred EcCCC--CcCe-EEEecCC-----HHHHHHHHHHcCCeeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 357 VQGLP--FFDT-VKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 357 ~~~~~--~~~~-~~i~~~~-----~~~v~~~L~~~GI~~~~~~---~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++.++ ..+. +.+..+. ..++.++|.++||.++... .+.+|++.+-++|.+|+++++++|+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~ 359 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAE 359 (368)
T ss_pred ccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 76322 1122 3444321 5789999999999986421 35899998889999999999999973
No 99
>PRK14012 cysteine desulfurase; Provisional
Probab=99.84 E-value=2.1e-18 Score=199.42 Aligned_cols=310 Identities=13% Similarity=0.141 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH---HcCCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA---MCGMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~---~~G~~vv~v 595 (946)
+.+.++++.+++++|.+.. .+..++|+++...++.++..+.. +++++|+++...|+++...+. ..|++++.+
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~----~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v 124 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 124 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE
Confidence 5677899999999998753 34556666665444444322111 246789999888877765533 469999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
+.+++|.+|+++|+++++ +++++|+++++ |.+|.+. |+++|.++||++|+++++|+++..+... .....+++|+
T Consensus 125 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~~D~ 199 (404)
T PRK14012 125 DPQSNGIIDLEKLEAAMR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERGIIFHVDAAQSVGKVP-IDLSKLKVDL 199 (404)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECcCCCccchh-hHHHHHHHHHHcCCEEEEEcchhcCCcc-cCcccCCCCE
Confidence 998889999999999997 78999999988 5789998 7999999999999999999987532211 1334578999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+++++||.+ |.+|.|+++++++....+.....|.... ++.+.++.++. ....+..|...+ ..
T Consensus 200 ~~~s~~K~~------gp~g~G~l~~~~~~~~~~~~~~~g~~~~---~~~~~gt~~~~-----~~~~l~~al~~~----~~ 261 (404)
T PRK14012 200 MSFSAHKIY------GPKGIGALYVRRKPRVRLEAQMHGGGHE---RGMRSGTLPTH-----QIVGMGEAARIA----KE 261 (404)
T ss_pred EEEehhhcc------CCCceEEEEEecCCCCCCCceecCCCcc---CCccCCCcCHH-----HHHHHHHHHHHH----Hh
Confidence 999999965 2236788888865433221111111000 00111122211 111111222222 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccC-CCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-------
Q 002263 755 GLTEASKIAILNANYMAKRLEKHYPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS------- 826 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~-~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~------- 826 (946)
++.+..++...+++++.+.|+++..+...+. .....+.+.+.+. ..+..++.+.|.+.++..+...
T Consensus 262 ~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 262 EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFN------YVEGESLIMALKDLAVSSGSACTSASLEP 335 (404)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEe------CcCHHHHHHhCCCeEEEchhhhCCCCCCC
Confidence 4455666777888899999877532322111 1111122223322 1234567777754433221100
Q ss_pred ------CC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 ------WP-----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 ------~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+| ..+.+|+++...+|++|+|+++++|++++++++.
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 1378999999999999999999999999888765
No 100
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.84 E-value=3.4e-19 Score=208.43 Aligned_cols=286 Identities=12% Similarity=0.088 Sum_probs=193.3
Q ss_pred hhHHHHHHH-HHHHHHHHhCCCCcceEEc---ccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhc-----
Q 002263 95 QGRLESLLN-FQTMIADLTGLPMSNASLL---DEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD----- 165 (946)
Q Consensus 95 qg~l~~l~e-~q~~la~L~g~~~~~~sl~---~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~----- 165 (946)
.-..+.+.+ +++.+++++|++.+++.+. .+||.+..+++.++ ++ +||+|++++.+|+++...++.+.+
T Consensus 75 ~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al-~~--~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~ 151 (452)
T PTZ00094 75 NEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL-LQ--PHDRIMGLDLPSGGHLTHGFYTAKKKVSA 151 (452)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh-cC--CCCEEEecccccCCccccccccccccccc
Confidence 334566664 7889999999987664333 57777776666665 33 799999999999998877643221
Q ss_pred -CCCeEEEE--------eccccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCC----
Q 002263 166 -GFDIKVVV--------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---- 230 (946)
Q Consensus 166 -~~gi~v~~--------~~~~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~---- 230 (946)
..++++.. +|++++++ +. .+++.|++..+ .+|.+.|+++|+++||++|++++||+ .+++|.+.
T Consensus 152 ~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~s-~~g~~~di~~I~~i~~~~ga~l~vDa-aq~~G~i~~~~~ 229 (452)
T PTZ00094 152 TSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGAS-AYPRDIDYKRFREICDSVGAYLMADI-AHTSGLVAAGVL 229 (452)
T ss_pred ceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeCC-CCCCccCHHHHHHHHHHcCCEEEEec-cchhccccCCCC
Confidence 11233333 24456666 53 25566666544 59999999999999999999999942 34555542
Q ss_pred -CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCc
Q 002263 231 -PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 308 (946)
Q Consensus 231 -~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni 308 (946)
.+. .|+|++++|+ |+|++ |..|++++++++.+.+..++ + ...| + .. .|+.+.
T Consensus 230 ~~~~-~~~D~l~~S~hK~l~G------P~Gg~l~~~~~~~~~l~~~~-----~---~~~~-----p-----~~-~G~~~~ 283 (452)
T PTZ00094 230 PSPF-PYADVVTTTTHKSLRG------PRSGLIFYRKKVKPDIENKI-----N---EAVF-----P-----GL-QGGPHN 283 (452)
T ss_pred CCCC-CCCcEEEcCCccCCCC------CCceEEEEecccchHHHHhh-----c---cccC-----C-----CC-CCCchH
Confidence 222 3899999999 66754 44578888876544332111 0 0000 0 01 244443
Q ss_pred cchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcCeEEEecCC--HHHHHHHHHHc
Q 002263 309 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCAD--AHAIASAAYKI 383 (946)
Q Consensus 309 ~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~~~~i~~~~--~~~v~~~L~~~ 383 (946)
..+.++.+++ .++...+.+++++++.+++++|++.|++.| +++... .+...+.+...+ ..++.+.|.++
T Consensus 284 ---~~iaal~~al--~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~ 357 (452)
T PTZ00094 284 ---HQIAAIAVQL--KEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAV 357 (452)
T ss_pred ---HHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHC
Confidence 3455565555 555566788999999999999999998887 888642 222234444444 67899999888
Q ss_pred CCeeee---------ecCCeEEEEeccCCC----HHHHHHHHHHHhC
Q 002263 384 EMNLRV---------VDSNTVTASFDETTT----LEDVDKLFIVFAG 417 (946)
Q Consensus 384 GI~~~~---------~~~~~lris~~~~~t----~edid~ll~~l~~ 417 (946)
||.+.. ..++.||+|++++|| ++|+++++++|..
T Consensus 358 gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 358 NISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred CcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 999842 124789999999987 9999999999963
No 101
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.84 E-value=1.4e-18 Score=197.21 Aligned_cols=321 Identities=13% Similarity=0.121 Sum_probs=212.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc--ceEEcccHHHHHHHHHHHhc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNN 137 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~--~~sl~~~~Ta~~ea~~la~~ 137 (946)
+.| |..+++.+.+.+.. .| ..+. +...+.+.++++.+++++|+++. .+.++.+||.++++++.++.
T Consensus 4 ~p~--p~~~~~~~~~~~~~--~~----~~~~----~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 4 TPG--PLSTSATVRDAMLV--DW----CHWD----SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred cCC--CCCCCHHHHHHhhh--hc----cCCC----HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc
Confidence 445 45677777766554 22 1121 12236778899999999999864 45678899988888776653
Q ss_pred cccCCCCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cC--CCEeEEEEEcC-CCceeecchH
Q 002263 138 IQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDYG 204 (946)
Q Consensus 138 ~~~~~gd~vv-v~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~--~~t~~v~v~~p-n~~G~i~di~ 204 (946)
. ++++++ ++...|++.... .++..|++++.++. +++++ +. ++++.|++.++ |.+|.+.|++
T Consensus 72 -~--~~~~vi~~~~~~~~~~~~~---~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~ 145 (355)
T TIGR03301 72 -P--RDGKLLVLINGAYGERLAK---ICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLE 145 (355)
T ss_pred -C--CCCeEEEECCCchhhHHHH---HHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHH
Confidence 2 456644 666677763322 24456888877654 34554 43 45667776665 6799999999
Q ss_pred HHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecC
Q 002263 205 DFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 282 (946)
Q Consensus 205 ~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~ 282 (946)
+|+++||++|+++++|+ ..+++... +..++++|++++++ |+|+ |+||+|++++++++++.+..+.
T Consensus 146 ~i~~l~~~~~~~livD~-~~s~g~~~~~~~~~~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~------- 212 (355)
T TIGR03301 146 AIAKVARSHGAVLIVDA-MSSFGAIPIDIEELDVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNA------- 212 (355)
T ss_pred HHHHHHHHcCCEEEEEe-ccccCCcccchhhcCccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCC-------
Confidence 99999999999999953 45666432 34678999999998 7664 4467899999999887764221
Q ss_pred CCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC
Q 002263 283 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 361 (946)
Q Consensus 283 ~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~G-l~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~ 361 (946)
+.+.+++.+--+...+...+.+..+...++++.+++ ..+..+| ++++.++..++.+++++.|+++| +++..++
T Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~ 286 (355)
T TIGR03301 213 ---RSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQAL--EELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPE 286 (355)
T ss_pred ---CCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHH--HHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCC
Confidence 112222211000001111122222224444555554 4444555 88888999999999999999987 8865322
Q ss_pred --CcC-eEEEecCC-----HHHHHHHHHHcCCeeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 362 --FFD-TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 362 --~~~-~~~i~~~~-----~~~v~~~L~~~GI~~~~~~---~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
... .+.+..+. ..++.++|.++||.+.... .+.+|++++.+++++|+++++++|+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 287 RWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred CCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 111 23454432 4689999999999886532 26899999999999999999999863
No 102
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.84 E-value=1.5e-18 Score=198.27 Aligned_cols=317 Identities=13% Similarity=0.137 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHhhCCCc--c-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCC-CCCCC-HHHHHHcCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGTN-PATAAMCGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~s-aHg~~-~~~a~~~G~~v 592 (946)
+.+.+.++++.+++++|.+. . .+.+++|+.|..+++.++. .++++|+++.. .++.. ...++..|+++
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~ 106 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAH 106 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcE
Confidence 33567899999999999863 2 3456677776654444331 13456776543 22222 14567899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCcc
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYI 670 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~ 670 (946)
+.++.++++.+|+++++++++++ ++++.|++++|+ .+|... |+++|+++||++|+++++|+++. ++.. ....++
T Consensus 107 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~~livDa~~~--~g~~~~~~~~~ 182 (368)
T PRK13479 107 VVLDTGEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILN-PLDEIAAVAKRHGKRLIVDAMSS--FGAIPIDIAEL 182 (368)
T ss_pred EEEECCCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCcccccc-CHHHHHHHHHHcCCEEEEEcccc--cCCcccccccc
Confidence 99999877889999999999742 467788899995 689998 79999999999999999998753 3322 122457
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC-CCC--CCCCCCCcccCccchhhHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP-APE--KSQPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~-~~~--~~~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
++|++++++||+|+ |.||+|++++++++.+.+.........+.. .+. .......... +...+....+.
T Consensus 183 ~~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~----~~~~~~~l~~a 253 (368)
T PRK13479 183 GIDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTP----PTHVVAAFYQA 253 (368)
T ss_pred CceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCC----cHHHHHHHHHH
Confidence 89999999999984 557899999998765554322111000100 000 0000000111 11112223344
Q ss_pred HHHHcHh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccC-CCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 002263 748 IAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 824 (946)
Q Consensus 748 l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~-~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~ 824 (946)
+..+..+ ++.+..++...+++++.+.|++. +.+..+.. ..+. .+.+.++. ..+.+..++.++|.++||.+..
T Consensus 254 l~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~~L~~~gi~v~~ 328 (368)
T PRK13479 254 LLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPI--IVTFHAPA---DPAYDFKEFYERLKEQGFVIYP 328 (368)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCce--EEEEECCC---CCCcCHHHHHHHHHHCCEEEec
Confidence 4444444 46777778888899999999875 54432210 1111 12222221 1125678999999999999743
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 825 MSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 825 ~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
...+..+.+|++..-.++.+|+++++++|++++++.
T Consensus 329 g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 329 GKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 221123689999866789999999999999987653
No 103
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.84 E-value=3.3e-19 Score=201.99 Aligned_cols=318 Identities=13% Similarity=0.054 Sum_probs=208.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhh---hhhHHHHHHHHHHHHHHHhCCCC-cceEEc-ccHHHHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEI---AQGRLESLLNFQTMIADLTGLPM-SNASLL-DEGTAAAEAMA 133 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~---sqg~l~~l~e~q~~la~L~g~~~-~~~sl~-~~~Ta~~ea~~ 133 (946)
...| |..+|+.+.+++......+.+-+-...++ +..-.+.+.+.++.+++|+|.+. ..+.++ .+||+++||++
T Consensus 7 ~~pG--P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~ 84 (360)
T PRK05355 7 FSAG--PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVP 84 (360)
T ss_pred ccCC--CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHH
Confidence 4567 66799888777664211110111111122 22234788899999999999843 334444 78899999998
Q ss_pred HHhccccCCCCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc--cCCCEeEEEEEc-CCCceee
Q 002263 134 MCNNIQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY--KSGDVCGVLVQY-PGTEGEV 200 (946)
Q Consensus 134 la~~~~~~~gd~vv-v~~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~--i~~~t~~v~v~~-pn~~G~i 200 (946)
+.+- . ++++++ +..+.+..... ..++.+|.. ..+.. .++++ ++++++.|.+++ .|++|.+
T Consensus 85 ~nl~-~--~g~~~l~i~~G~fg~r~~---~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 85 MNLL-G--GGKKADYVDTGSWSKKAI---KEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTE 157 (360)
T ss_pred HhcC-C--CCCeEEEEECCHHHHHHH---HHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEe
Confidence 7663 2 555555 44455533322 224455654 32221 12222 667889998876 5889999
Q ss_pred c-chHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeE
Q 002263 201 L-DYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 278 (946)
Q Consensus 201 ~-di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~ 278 (946)
+ ||++| +|++++||+ ..+++..+ +..+| |++++|+||+ +|.||+|++++++++++++.+.+ +
T Consensus 158 ~~~i~~i------~g~l~vVDa-vss~g~~~idv~~~--d~~~~ssqK~-----lgP~Glg~l~~s~~~l~~~~~~~-~- 221 (360)
T PRK05355 158 FHELPDT------GDVPLVADM-SSDILSRPIDVSKF--GLIYAGAQKN-----IGPAGLTIVIVREDLLGRALPSI-P- 221 (360)
T ss_pred cCccccc------CCCcEEEEc-CccccCccCCHHHc--cEEEEecccc-----ccCCceEEEEECHHHHhhcccCC-C-
Confidence 8 88877 799999954 33555443 44555 5999999554 23367999999999998876531 1
Q ss_pred eecCCCCcceEEecccccccccc-cccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 002263 279 SIDSSGKPALRVAMQTREQHIRR-DKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 279 s~d~~g~~~~~l~l~tre~~irr-e~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
..+++....+ +. -.+|+|+ ..++++.+++ .++..+ |++++.+|..+++++++++|+++|.+.
T Consensus 222 ---------~~~~~~~~~~--~~~~~~Tp~~---~~i~aL~~aL--~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~ 285 (360)
T PRK05355 222 ---------SMLDYKTHAD--NDSMYNTPPT---FAIYLAGLVF--KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYR 285 (360)
T ss_pred ---------hHHHHHHHHh--cCCccCCCcH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 1111110000 01 1378887 6788888887 677778 899999999999999999999997233
Q ss_pred EcCC--CCcC-eEEEecCC---HHHHHHHHHHcCCeeeeec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 357 VQGL--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVVD--SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 357 ~~~~--~~~~-~~~i~~~~---~~~v~~~L~~~GI~~~~~~--~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+ ...+ .++|..++ ..++.+.+.++||.+.... .+.+|+|+..+||.+||++|+++|+.
T Consensus 286 ~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 286 NPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred cCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 3322 2333 36777766 3567678888999884332 47899999999999999999999973
No 104
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.83 E-value=5.8e-19 Score=199.01 Aligned_cols=313 Identities=12% Similarity=0.058 Sum_probs=208.1
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhhhhhHH---HHHHHHHHHHHHHhCCCC-cceEEccc-HHHHHHHHHHHhccccC
Q 002263 67 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRL---ESLLNFQTMIADLTGLPM-SNASLLDE-GTAAAEAMAMCNNIQKG 141 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l---~~l~e~q~~la~L~g~~~-~~~sl~~~-~Ta~~ea~~la~~~~~~ 141 (946)
++|..+.+.+.+...++.+-+-.+.++++..- +.+.+.++.+.+|+|.+. ..+.++.| ||.++|+++..+. .
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~-~-- 78 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL-A-- 78 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-C--
Confidence 47777665666432222222333444444333 888999999999999843 35767766 9999999887763 2
Q ss_pred CCCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEec---------cccccc--cCCCEeEEEEEc-CCCceeecchHHHHH
Q 002263 142 KKKTFI-IASNCHPQTIDICITRADGFDIKVVVSD---------LKDIDY--KSGDVCGVLVQY-PGTEGEVLDYGDFIK 208 (946)
Q Consensus 142 ~gd~vv-v~~~~Hps~~~~~~~~a~~~gi~v~~~~---------~~~l~~--i~~~t~~v~v~~-pn~~G~i~di~~i~~ 208 (946)
++++++ +..+.+.... ...++..|+ +..+. ..+++. ++++++.|.+++ .|++|+..| +
T Consensus 79 ~~~~~l~i~~G~fg~r~---~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~ 149 (349)
T TIGR01364 79 EGKVADYIVTGAWSKKA---AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----E 149 (349)
T ss_pred CCCeEEEEECCHHHHHH---HHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----e
Confidence 567765 4445553332 233556677 44433 123332 456789998886 488999887 6
Q ss_pred HHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcc
Q 002263 209 NAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 287 (946)
Q Consensus 209 ~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~ 287 (946)
+++.+|++++||+ ..+++..+ +..+| |++++|+||+ +|.||+|++++++++++++++...
T Consensus 150 l~~~~~~l~iVDa-vss~g~~~id~~~~--d~~~~ssqK~-----lgP~Glg~l~~s~~~~~~~~~~~~----------- 210 (349)
T TIGR01364 150 LPDVKNAPLVADM-SSNILSRPIDVSKF--GLIYAGAQKN-----IGPAGLTVVIVRKDLLGRASRITP----------- 210 (349)
T ss_pred ecccCCCeEEEEc-cccccCccCCHHHc--cEEEEecccc-----cCCCceEEEEECHHHHhhcccCCC-----------
Confidence 6777899999944 33555442 34455 5999999543 233679999999999988755211
Q ss_pred eEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-C--CCc
Q 002263 288 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-L--PFF 363 (946)
Q Consensus 288 ~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~--~~~ 363 (946)
..+.+....+. ..-.+|+|+ ..++++.+++ .++..+ |++++.+|..+++++++++|++++|+.... + ...
T Consensus 211 ~~~~~~~~~~~-~~~~~Tp~~---~~i~al~~al--~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs 284 (349)
T TIGR01364 211 SMLNYKIHAEN-DSMYNTPPT---FAIYVSGLVF--KWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRS 284 (349)
T ss_pred CcchHHHHHhc-CCCCCCCcH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcC
Confidence 11111100000 011268887 6788888887 777778 799999999999999999999994375542 2 123
Q ss_pred C-eEEEecCC---HHHHHHHHHHcCCeeeeec--CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 364 D-TVKVKCAD---AHAIASAAYKIEMNLRVVD--SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 364 ~-~~~i~~~~---~~~v~~~L~~~GI~~~~~~--~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+ .++|..++ ..++.+.+.++||.+.... .+.+|+|+..+||.+||++|+++|+
T Consensus 285 ~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 285 RMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred CeEEEEecCChhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHH
Confidence 2 36677664 3567678888999654432 4789999999999999999999997
No 105
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.83 E-value=6.1e-19 Score=184.08 Aligned_cols=305 Identities=15% Similarity=0.117 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHH-HhccccCCCCEEEEcC-CCCHHHHHHHHHhhcCCC--eEEE
Q 002263 97 RLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIAS-NCHPQTIDICITRADGFD--IKVV 172 (946)
Q Consensus 97 ~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~l-a~~~~~~~gd~vvv~~-~~Hps~~~~~~~~a~~~g--i~v~ 172 (946)
+...=...-..+|-|+|+...++...++.|.-+...+. +++. .++++||+++ ..||+-..+.+.+++-.+ .++.
T Consensus 74 W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~--~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~ 151 (407)
T COG3844 74 WFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRP--QEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLE 151 (407)
T ss_pred hhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhcc--CCCceEEeecCCCCCcchhhhcchhhhhcccccce
Confidence 33333344468999999999889888877755554443 3433 2678888887 678988887765554443 2333
Q ss_pred E-eccccccc-cCCCEeEEEEEcCCC-ceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccc
Q 002263 173 V-SDLKDIDY-KSGDVCGVLVQYPGT-EGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRF 247 (946)
Q Consensus 173 ~-~~~~~l~~-i~~~t~~v~v~~pn~-~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~l 247 (946)
. +.+++++. ++++++.|++++.|+ +|...|+.+|.++||++|+++..+- .++.|.++ ....+|+|+.++++ |.|
T Consensus 152 ~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDL-AHsaGavp~~Lh~~gaDfaigcsyKYL 230 (407)
T COG3844 152 GVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDL-AHSAGAVPVDLHAAGADFAIGCSYKYL 230 (407)
T ss_pred eeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeeh-hcccCCcceeecccCCCeeeeeeceec
Confidence 2 33456776 889999999999886 9999999999999999999998831 24666553 45789999999999 555
Q ss_pred cccCCCCCCce-EEEEEchhhhhcCCCceEeEeecCCCCcceEEecc-cccccccccccCCCccchHHHHHHHHHH-HHH
Q 002263 248 GVPMGYGGPHA-AFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ-TREQHIRRDKATSNICTAQALLANMAAM-YAV 324 (946)
Q Consensus 248 g~P~~~GGP~~-g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~-tre~~irre~aTsni~t~~~l~a~~aa~-y~~ 324 (946)
.||||+ +|+++.+++.+..-+++.||.-- .++ |.|.-. +--.+++|. .|++|..+.+.+-- -+.
T Consensus 231 -----NgGPGapa~l~v~~~h~e~~~~~lsgW~gh--a~p-f~m~~~y~p~~ga~rf-----~~gt~~V~s~aal~~aLD 297 (407)
T COG3844 231 -----NGGPGAPAGLFVAPRHRERSWPPLSGWWGH--ARP-FAMEEVYAPGPGARRF-----LCGTQPVLSLAALEGALD 297 (407)
T ss_pred -----cCCCCCceeEEeccccccccccccccccCC--CCc-chhhhccCcCccccce-----eeCCcchhhhHHHhhhhh
Confidence 578875 99999999888777888887421 223 544311 112455553 45555543332211 136
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhcC-C--CEEEcCC----CCcCeEEEecCCHHHHHHHHHHcCCeeeeecCCeEEE
Q 002263 325 YHGPEGLKTIAQRVHGLAGTFALGLKKL-G--TVEVQGL----PFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTA 397 (946)
Q Consensus 325 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g--~~~~~~~----~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~~~~lri 397 (946)
.....+|.+++++...++.|+.+.++.. + ++++.++ .+...|++..+.+++|++.|.++||....-.++.+|+
T Consensus 298 ifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R~P~vlRf 377 (407)
T COG3844 298 IFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFREPDVLRF 377 (407)
T ss_pred hhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCccccccCCCeeee
Confidence 6667789999999999999999999875 2 3677653 2345688888889999999999999776556899999
Q ss_pred Eecc-CCCHHHHHHHHHHHhC
Q 002263 398 SFDE-TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 398 s~~~-~~t~edid~ll~~l~~ 417 (946)
.+++ |++.+|+-..+++|.+
T Consensus 378 gftPlY~~~~DVw~AV~~L~e 398 (407)
T COG3844 378 GFTPLYVSFVDVWDAVDALEE 398 (407)
T ss_pred cCccceechhHHHHHHHHHHH
Confidence 9998 7899999988888863
No 106
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.83 E-value=8.9e-19 Score=198.76 Aligned_cols=312 Identities=12% Similarity=0.149 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHHhhCCCcc--c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCC-CHHHHHHcCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGT-NPATAAMCGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~--~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~-~~~~a~~~G~~v 592 (946)
+.+...++++.+++++|.+.. . +..++|+.+..+.+.++. .++++++ +....++. ....+...|+++
T Consensus 29 ~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~vi~~~~~~~~~~~~~~a~~~g~~~ 100 (355)
T TIGR03301 29 FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGKLLVLINGAYGERLAKICEYLGIPH 100 (355)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCeEEEECCCchhhHHHHHHHHcCCce
Confidence 346788999999999999752 2 345566665544433221 1335555 44444443 234577899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCcc
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 670 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~ 670 (946)
+.++.++++.+|+++++++++++ ++++.++++++ |.+|++. |+++|+++|+++|+++++|+++. ++... ....+
T Consensus 101 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~livD~~~s--~g~~~~~~~~~ 176 (355)
T TIGR03301 101 TDLNFSEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILN-PLEAIAKVARSHGAVLIVDAMSS--FGAIPIDIEEL 176 (355)
T ss_pred EEEecCCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchh-HHHHHHHHHHHcCCEEEEEeccc--cCCcccchhhc
Confidence 99998877889999999999753 46677777776 5689998 79999999999999999998653 33321 23467
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCC----CCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI----PAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~----~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
+.|+++.++||+|+ |+||+|++++++++.+.+.........+. ....+...+ .... +.....++.+
T Consensus 177 ~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~t~----~~~~~~a~~~ 246 (355)
T TIGR03301 177 DVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKW-RFTP----PTHTVYAFAQ 246 (355)
T ss_pred CccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCC-CCCC----cHHHHHHHHH
Confidence 89999999999984 56789999999876554432111000000 000000000 1111 1222333445
Q ss_pred HHHHHcHhh-HHHHHHHHHHHHHHHHHHHhcc-CCeeeccC-CCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 747 YIAMMGSKG-LTEASKIAILNANYMAKRLEKH-YPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 747 ~l~~lG~eG-l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~-~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
.+..+..+| +.+..++...+++++.+.|++. +++..+.. .+.. .+.+.++.. ...+..++.++|.++|+.+.
T Consensus 247 al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~l~~~gi~i~ 321 (355)
T TIGR03301 247 ALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPI--IVSFLYPDD---PDFDFDDFYQELKERGFVIY 321 (355)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCc--EEEEECCCC---CcchHHHHHHHHHHCCEEEE
Confidence 566666666 7777777788899999999875 44332211 1111 123444310 11356789999999999875
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 824 TMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 824 ~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
.......+.+||++...++++|++++++.|+++
T Consensus 322 ~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 322 PGKLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 432122378999998889999999999999865
No 107
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.83 E-value=3e-19 Score=202.57 Aligned_cols=320 Identities=13% Similarity=0.093 Sum_probs=209.5
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhh---hhHHHHHHHHHHHHHHHhCCC-CcceEEccc-HHHHHHHHHH
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIA---QGRLESLLNFQTMIADLTGLP-MSNASLLDE-GTAAAEAMAM 134 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~s---qg~l~~l~e~q~~la~L~g~~-~~~~sl~~~-~Ta~~ea~~l 134 (946)
..| |..+|+.|.+++......+.+.+-...+++ ....+.+.+.++.+++|+|++ ..++.++.+ +|.++++++.
T Consensus 4 ~pG--p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 4 SAG--PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCC--CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHH
Confidence 455 567888888777642111112221122233 455688999999999999984 456878877 9999998877
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc------c---cc-c-cCCCEeEEEEEc-CCCceeecc
Q 002263 135 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------D---ID-Y-KSGDVCGVLVQY-PGTEGEVLD 202 (946)
Q Consensus 135 a~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~------~---l~-~-i~~~t~~v~v~~-pn~~G~i~d 202 (946)
++....+++++|++....|.+ ..+++..|+++++++.+ + +. . ++++|++|.+++ .|.+|.+.+
T Consensus 82 ~l~~~~~~~~~i~~g~~~~~~-----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 82 NLLGDKGTADYVVTGAWSAKA-----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred hcCCCCCeEEEEECCHHHHHH-----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc
Confidence 763211256666654333332 22355678887776542 2 11 2 567899998876 588999832
Q ss_pred hHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeec
Q 002263 203 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 281 (946)
Q Consensus 203 i~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d 281 (946)
++++.+|++++||+ ..++|..+ +..++|+ ++.++||+ +|.||+|++++++++++++++....
T Consensus 157 -----~i~~~~g~~~~VDa-~qs~g~~~idv~~~~~--~~ss~~K~-----lGP~G~g~l~~~~~~~~~~~~~~~~---- 219 (355)
T cd00611 157 -----EVPDTGGVPLVADM-SSNILSRPIDVSKFGV--IYAGAQKN-----LGPAGVTVVIVRKDLLGKARKITPS---- 219 (355)
T ss_pred -----eecccCCCeEEEEc-cccccCCCCCHHHhCE--EEeecccc-----cCCCceEEEEECHHHHhhcccCCCC----
Confidence 34455999999943 23555443 4456664 45556655 3346799999999998887653211
Q ss_pred CCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcC-CCEE-Ec
Q 002263 282 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL-GTVE-VQ 358 (946)
Q Consensus 282 ~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~-g~~~-~~ 358 (946)
+ +.+.+.... ....+|+|+ .+++++.+++ .++..+ |++++.+|..+++++|+++|+++ | +. ..
T Consensus 220 ------~-~~~~~~~~~-~~~~~Tpn~---~~i~~L~aal--~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~ 285 (355)
T cd00611 220 ------M-LNYKTHADN-NSLYNTPPT---FAIYMMGLVL--KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGP 285 (355)
T ss_pred ------c-ccHHHHHhc-CCCCCCChH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccC
Confidence 0 011010010 112578887 6788888887 777777 79999999999999999999999 6 63 22
Q ss_pred CC--CCcC-eEEEecCC---HHHHHHHHHHcCCeeeee--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 359 GL--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 359 ~~--~~~~-~~~i~~~~---~~~v~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+ .... .++|+.++ ..++.+.+.++|+..... ..+.+|+|+..+||++||++|+++|+.
T Consensus 286 ~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 286 VDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred CCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 11 1232 37777665 345556777899975433 247899999999999999999999963
No 108
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.83 E-value=8.7e-19 Score=201.96 Aligned_cols=281 Identities=14% Similarity=0.159 Sum_probs=195.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
...|+.+...++++.+|+++|.+. +.++++++.+..+++.++ +. +||+|++++..|+++...++. ++..++.+.
T Consensus 77 ~~~G~~~~~~~le~~ia~~~g~~~--~ii~~~~~~a~~~~~~~l-~~--~gd~vi~~~~~~~s~~~~~~~-~~~~~~~~~ 150 (393)
T TIGR01822 77 FICGTQDIHKELEAKIAAFLGTED--TILYASCFDANGGLFETL-LG--AEDAIISDALNHASIIDGVRL-CKAKRYRYA 150 (393)
T ss_pred cccCChHHHHHHHHHHHHHhCCCc--EEEECchHHHHHHHHHHh-CC--CCCEEEEeccccHHHHHHHHh-cCCceEEeC
Confidence 345878888999999999999863 777888887777666655 33 899999999999999988743 444555555
Q ss_pred Eeccccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCC--------C-Cc
Q 002263 173 VSDLKDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP--------G-EL 235 (946)
Q Consensus 173 ~~~~~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~--------~-~~ 235 (946)
.+|++++++ +.+ +|++|++.++ |.+|.+.|+++|+++||++|+++++| +.++++.+... + ..
T Consensus 151 ~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~ 229 (393)
T TIGR01822 151 NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVD-ECHATGFLGPTGRGSHELCGVMG 229 (393)
T ss_pred CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEE-CCccccCcCCCCCchHHhcCCCC
Confidence 567777776 542 6888887765 78999999999999999999999994 23344443211 1 12
Q ss_pred cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 236 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 236 GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
++|++++|. |+|+ |+.+|++++++++.+.+... ...+.+ .+|.+. ...
T Consensus 230 ~~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~----------~~~~~~------------~~~~~~---~~~ 278 (393)
T TIGR01822 230 RVDIITGTLGKALG------GASGGFTTARKEVVELLRQR----------SRPYLF------------SNSLPP---AVV 278 (393)
T ss_pred CCeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHh----------Ccccee------------cCCCCH---HHH
Confidence 689999998 7663 34568999988877655110 000110 112111 222
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee-
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 390 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~- 390 (946)
.+..+++ ..+ ++.+++.++..++.+++++.|++.| +++... ....+.+...+ +.++.+.|.++||.+...
T Consensus 279 ~a~~~al--~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~ 352 (393)
T TIGR01822 279 GASIKVL--EML--EASNELRDRLWANTRYFRERMEAAG-FDIKPA-DHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFF 352 (393)
T ss_pred HHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 2333333 332 2456778889999999999999887 776532 12234444433 678999999999987532
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 ------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
....+|+|++.++|++||++++++|..
T Consensus 353 ~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 353 YPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 124699999999999999999999963
No 109
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=2.8e-18 Score=198.32 Aligned_cols=296 Identities=21% Similarity=0.237 Sum_probs=193.3
Q ss_pred HHH-HHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-----HHHcCCEEEEE
Q 002263 522 FNN-LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSV 595 (946)
Q Consensus 522 ~~e-l~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-----a~~~G~~vv~v 595 (946)
+.+ .++++++++|.+...+.+++|++|..+++.++. +++++|+++...|+.+... ++..|.+++.+
T Consensus 66 l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 137 (402)
T cd00378 66 IEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESV 137 (402)
T ss_pred HHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhc--------CCCCEEEEecCccCccccccccccccccceeEEEe
Confidence 344 566788999998766666677776654444331 2568899998888766543 56788887777
Q ss_pred cCCC---CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc--c-ccCCCc
Q 002263 596 GTDA---KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--G-LTSPGY 669 (946)
Q Consensus 596 ~~~~---~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~--g-l~~pg~ 669 (946)
+++. ++.+|++++++++.+ +++++|++++|++ |... ++++|+++||++|+++++|++|..++. + ...+..
T Consensus 138 ~~~~~~~~~~id~~~l~~~i~~--~~~~~v~~~~~~~-~~~~-~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~ 213 (402)
T cd00378 138 PYGVDPETGLIDYDALEKMALE--FKPKLIVAGASAY-PRPI-DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP 213 (402)
T ss_pred cCCcCcccCCcCHHHHHHHHHh--CCCCEEEecCccc-CCCc-CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc
Confidence 6643 588999999999963 4677888877754 6665 799999999999999999998744332 1 112223
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
++|+++.++||+| +||++|++.+++ ++...+.... .....+++. ....++.+ ..+
T Consensus 214 -~~dv~~~s~sK~l------~G~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~~~--~~~~~a~~-~al 269 (402)
T cd00378 214 -GADVVTTTTHKTL------RGPRGGLILTRKGELAKKINSAV--------------FPGLQGGPH--LHVIAAKA-VAL 269 (402)
T ss_pred -CCcEEEeccccCC------CCCCceEEEeccHHHHHHHHHHh--------------CccccCCch--HHHHHHHH-HHH
Confidence 7899999999988 357777777775 6554432100 000111110 01111112 222
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 827 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~ 827 (946)
..+-..++.+..++..++++++.+.|++. +.+.. .+.+ .+.+++++++ .+.+...+.+.|.++||.+....+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~--~~~v~v~~~~----~~~~~~~~~~~l~~~gI~v~~~~~ 342 (402)
T cd00378 270 KEALEPEFKAYAKQVVENAKALAEALKERGFKVVS-GGTD--NHLVLVDLRP----KGITGKAAEDALEEAGITVNKNTL 342 (402)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEee-cCCC--CeEEEEeCCc----cCCCHHHHHHHHHHcCcEEcCCcC
Confidence 22222245566677788999999999875 54432 1112 2345677652 134567788888889998754444
Q ss_pred CC-------CCEEEEEcCCCC----CHHHHHHHHHHHHHHHHHH
Q 002263 828 PV-------PGTLMIEPTESE----SKEELDRYCDALISIREEI 860 (946)
Q Consensus 828 p~-------~~~lri~~t~~~----t~~eid~~~~aL~~i~~e~ 860 (946)
|. +..+|++++..+ +.+||+++++.|++++++-
T Consensus 343 p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~ 386 (402)
T cd00378 343 PWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDA 386 (402)
T ss_pred CCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhcc
Confidence 42 257999998754 6899999999999876553
No 110
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.82 E-value=6.5e-18 Score=194.09 Aligned_cols=284 Identities=17% Similarity=0.129 Sum_probs=194.1
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
.+....+.++++.+|+++|++. +.+++|+|.++.+++.++ .. +||+|++++..|.+....++ ..|++++.+
T Consensus 59 ~~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~al~~l-~~--~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~v 129 (387)
T PRK09331 59 QIKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFAVMHSL-CK--KGDYVVLDGLAHYTSYVAAE----RAGLNVREV 129 (387)
T ss_pred cccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHh-cC--CCCEEEECCCchHHHHHHHH----HcCCEEEEE
Confidence 4445578999999999999975 678899998888777665 23 89999999999999987653 358888887
Q ss_pred cc----------ccccc-cC-------CCEeEEEEEcCC-CceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCC
Q 002263 175 DL----------KDIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGE 234 (946)
Q Consensus 175 ~~----------~~l~~-i~-------~~t~~v~v~~pn-~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~ 234 (946)
+. +++++ +. +++++|++++|+ .+|.+.|+++|+++||++|++++|++ .++.|.++ +..+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~-a~~~g~~~~~~~~ 208 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNG-AYTVGRMPVDGKK 208 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEEC-CcccCCcCCCHHH
Confidence 65 23444 43 368999999985 59999999999999999999999943 45666543 3457
Q ss_pred ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH
Q 002263 235 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 313 (946)
Q Consensus 235 ~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~ 313 (946)
+|+|++++|+ |+|++ +|++||+++++++++.+... .+.|... . .....+|++. .+
T Consensus 209 ~g~D~~~~s~~K~l~~-----~~~~G~l~~~~~~i~~~~~~----------~~~~~~~-----~-~~~~~~~~~~---~~ 264 (387)
T PRK09331 209 LGADFIVGSGHKSMAA-----SAPSGVLATTEEYADKVFRT----------SRKFGVK-----E-VELLGCTLRG---AP 264 (387)
T ss_pred cCCCEEEeeCcccccC-----CCCEEEEEECHHHHhhcccc----------cCCCccc-----c-eeeeceecCc---hH
Confidence 8999999998 77753 34689999999887765211 0111100 0 0001112211 23
Q ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC-C-CcCeEEEecCC-----------HHHHHHH
Q 002263 314 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-P-FFDTVKVKCAD-----------AHAIASA 379 (946)
Q Consensus 314 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~-~-~~~~~~i~~~~-----------~~~v~~~ 379 (946)
.+++++++ ..+- +-+ +..++.++++++++++|+++ | ++++.+ + ..+.+.+..+. +.++.+.
T Consensus 265 ~~~~~aal--~~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (387)
T PRK09331 265 LVTLMASF--PHVV-ERV-KRWDEEVKKARWFVDELEKIEG-FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEE 339 (387)
T ss_pred HHHHHHHH--HHHH-HHH-HHHHHHHHHHHHHHHHHhcCCC-EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHH
Confidence 44455554 1111 112 24455678899999999999 7 998842 1 11122233221 3569999
Q ss_pred HHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 380 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 380 L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
|.++||.......+.++...+..+|++|+++++++|+.
T Consensus 340 L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~ 377 (387)
T PRK09331 340 LKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKE 377 (387)
T ss_pred HHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHH
Confidence 99999984332345666666667899999999999973
No 111
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=8.7e-18 Score=186.18 Aligned_cols=313 Identities=16% Similarity=0.203 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~ 591 (946)
...++.++.+.+..+++.+. +.+.+++|+.|.+|++..+- .++++||+... |.+.. .++.+|.+
T Consensus 36 F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkVLv~~n--G~FG~R~~~ia~~~g~~ 105 (383)
T COG0075 36 FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKVLVVVN--GKFGERFAEIAERYGAE 105 (383)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeC--ChHHHHHHHHHHHhCCc
Confidence 44678889999999999883 45667778777776654332 25688887543 34433 38889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGY 669 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~ 669 (946)
++.+.+...-.+|+++++++++++ ++..+|.+++- +.+|+.. |+++|+++|++||++++||+. .++|+. .++.+
T Consensus 106 v~~~~~~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvln-pl~~I~~~~k~~g~l~iVDaV--sS~Gg~~~~vd~ 181 (383)
T COG0075 106 VVVLEVEWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLN-PLKEIAKAAKEHGALLIVDAV--SSLGGEPLKVDE 181 (383)
T ss_pred eEEEeCCCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccC-cHHHHHHHHHHcCCEEEEEec--ccCCCcccchhh
Confidence 999998877789999999999853 56777777776 5689999 899999999999999999986 355654 35678
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcc-ccCCCCC---C-CCCCCCCCCcccCccchhhHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGIP---A-PEKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v-~~~~d~~---~-~~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
||+|+++...+|.|+.| ||+|++.++++....+..+.. +..-|.. . +.....+. .|.+ .....+-
T Consensus 182 wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p--~Tpp---v~~i~aL 251 (383)
T COG0075 182 WGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTP--YTPP---VNLIYAL 251 (383)
T ss_pred cCccEEEecCchhccCC-----CccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCC--CCCC---HHHHHHH
Confidence 99999999999999766 899999999875554432211 1111110 0 00001111 1111 1122234
Q ss_pred HHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceee-eEEEecccccccCCCCHHHHHHHHH-HCCcc
Q 002263 745 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAH-EFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 821 (946)
Q Consensus 745 ~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~-e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~ 821 (946)
..++..+-.||+..+.+++..++++++++++.. +++.. . .+.... ..++..+ .|++..++..+++ ++|+.
T Consensus 252 ~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~-~~~~s~tvta~~~P-----~g~~~~~~~~~~~~~~g~~ 324 (383)
T COG0075 252 REALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-D-PERRSPTVTAIKVP-----EGVDDKKVRRALLKEYGVE 324 (383)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-C-cccCCCceEEEECC-----CCCCcHHHHHHHHHhCCEE
Confidence 567888889999999999999999999999985 66643 1 111111 1233333 3666555555555 56888
Q ss_pred cCCCCCCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPV-PGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 822 ~~~~~~p~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+....-|. +..+||.-.-..+.+++...+.+|..++.++.
T Consensus 325 i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 325 IAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred ecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 65433343 36899999888899999999999999988764
No 112
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.81 E-value=2.6e-18 Score=196.37 Aligned_cols=303 Identities=18% Similarity=0.209 Sum_probs=205.5
Q ss_pred eeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHH
Q 002263 56 KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC 135 (946)
Q Consensus 56 ~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la 135 (946)
++|+|.+.+|..+.+.+. .+. .|.+ ++..+....|+...+.++++.+|+++|.+. +.++++|..+..+++-+
T Consensus 110 ndYLGL~~~p~v~~a~~~-ai~---~yG~--g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~~i~a 181 (476)
T PLN02955 110 NDYLGLSSHPTISNAAAN-AAK---EYGM--GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCPTGFAANMAAMVA 181 (476)
T ss_pred cCccCCCCCHHHHHHHHH-HHH---HcCC--CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHHHHHH
Confidence 468888876655555543 433 2333 344667888999999999999999999987 88999998887777655
Q ss_pred hc-----c------ccCCCCEEEEcCCCCHHHHHHHHHhhcCC-CeEE---EEeccccccc-c---CCCEeEEEEEcC--
Q 002263 136 NN-----I------QKGKKKTFIIASNCHPQTIDICITRADGF-DIKV---VVSDLKDIDY-K---SGDVCGVLVQYP-- 194 (946)
Q Consensus 136 ~~-----~------~~~~gd~vvv~~~~Hps~~~~~~~~a~~~-gi~v---~~~~~~~l~~-i---~~~t~~v~v~~p-- 194 (946)
+. . ..++++.|+.+..+|+|++..++. ++.. +.++ .+.|+++|++ + .++.+ ++|+.+
T Consensus 182 L~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~-~Vv~EgV~ 259 (476)
T PLN02955 182 IGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGNVEVFVYRHCDMYHLNSLLSSCKMKRK-VVVTDSLF 259 (476)
T ss_pred HhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCCceEEEeCCCCHHHHHHHHHhCCCCce-EEEEeCCC
Confidence 41 0 013567899999999999999864 3322 3444 4566777765 4 23344 444544
Q ss_pred CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC-----Cc----cceEEEecc-ccccccCCCCCCceEEEEEc
Q 002263 195 GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLATS 264 (946)
Q Consensus 195 n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~-----~~----GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~ 264 (946)
++.|.+.|+++|.++++++|++++|+ +.++.+.+...| .+ ..||++++. |.||.. .||+.++
T Consensus 260 SmdGdiapL~eL~~L~~~~ga~LiVD-EAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~-------GGfi~gs 331 (476)
T PLN02955 260 SMDGDFAPMEELSQLRKKYGFLLVID-DAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH-------GGFIACS 331 (476)
T ss_pred CCCCCcCCHHHHHHHHHHcCcEEEEc-ccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc-------CceeecH
Confidence 78999999999999999999999993 456666654421 23 468999996 998642 3688888
Q ss_pred hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH----HHHHHHHHHHHhChhhHHHHHHHHHH
Q 002263 265 QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL----LANMAAMYAVYHGPEGLKTIAQRVHG 340 (946)
Q Consensus 265 ~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l----~a~~aa~y~~~~g~~Gl~~i~~~~~~ 340 (946)
+++++.+.. .+.+.|.|+... .+..+++ ..+ ..+ +...+++++
T Consensus 332 ~~~~~~l~~-----------------------------~~~~~ifStalpp~~aaa~laal--~l~-~~~-~~~r~~L~~ 378 (476)
T PLN02955 332 KKWKQLIQS-----------------------------RGRSFIFSTAIPVPMAAAAYAAV--VVA-RKE-KWRRKAIWE 378 (476)
T ss_pred HHHHHHHHH-----------------------------hCCCCeecccccHHHHHHHHHHH--HHH-hcC-HHHHHHHHH
Confidence 877665510 112223333222 2222333 222 122 346678889
Q ss_pred HHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeeec-------CCeEEEEeccCCCHHHHHH
Q 002263 341 LAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDK 410 (946)
Q Consensus 341 ~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~-------~~~lris~~~~~t~edid~ 410 (946)
+.+++++. .| +.+ . .+.+.|.+.+ +.++.++|.++||++..+. ..++|++++..||++||++
T Consensus 379 n~~~fr~~---~G-~~~-~---sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~ 450 (476)
T PLN02955 379 RVKEFKAL---SG-VDI-S---SPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKK 450 (476)
T ss_pred HHHHHHHh---cC-CCC-C---CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHH
Confidence 99999884 35 543 1 2344444433 7789999999999986432 2479999999999999999
Q ss_pred HHHHHhC
Q 002263 411 LFIVFAG 417 (946)
Q Consensus 411 ll~~l~~ 417 (946)
++++|..
T Consensus 451 lv~~L~~ 457 (476)
T PLN02955 451 LITALSS 457 (476)
T ss_pred HHHHHHH
Confidence 9999963
No 113
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.81 E-value=1.3e-17 Score=190.52 Aligned_cols=285 Identities=17% Similarity=0.157 Sum_probs=192.1
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
..+|....+.++++.+|+++|++. +.++++++.++.+++.++. . +||+|+++...|.+....+ +..|++++
T Consensus 45 ~~~~~~~~~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~~~l~-~--~gd~Vl~~~~~h~s~~~~~----~~~g~~~~ 115 (370)
T TIGR02539 45 LDQITKPPIHDFLEDLAEFLGMDE--ARVTHGAREGKFAVMHALC-K--EGDWVVLDGLAHYTSYVAA----ERAGLNVK 115 (370)
T ss_pred cccccchHHHHHHHHHHHHhCCCc--eEEECChHHHHHHHHHHhh-C--CCCEEEECCcccHHHHHHH----HHcCCEEE
Confidence 445666678888899999999987 5568999988888777663 3 7899999999998887654 34688877
Q ss_pred Eecc----------ccccc-cC-------CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CC
Q 002263 173 VSDL----------KDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP 232 (946)
Q Consensus 173 ~~~~----------~~l~~-i~-------~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~ 232 (946)
.++. +++++ +. +++++|++++| |.+|.+.|+++|+++||++|++++|| +.++.+.+. +.
T Consensus 116 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD-ea~~~g~~~~~~ 194 (370)
T TIGR02539 116 EVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN-CAYTVGRMPVSA 194 (370)
T ss_pred EEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE-CccccCCcCCCH
Confidence 7654 44544 43 36788999998 57999999999999999999999994 344555443 33
Q ss_pred CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccch
Q 002263 233 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 311 (946)
Q Consensus 233 ~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~ 311 (946)
.++++|++++|. |+|+. || .+||+++++++++.+...... |.+.- ...-.+|++.
T Consensus 195 ~~~~~di~v~s~sK~~~~----~g-~~G~l~~~~~~i~~l~~~~~~----------~~~~~------~~~~~~~~~~--- 250 (370)
T TIGR02539 195 KEIGADFIVGSGHKSMAA----SG-PCGVLGMSEEWEDIVLRKSRY----------SPVKE------VELLGCTSRG--- 250 (370)
T ss_pred HHcCCCEEEeeCcccccC----CC-CEEEEEECHHHHhhhcccccC----------Cccce------eeeecccccc---
Confidence 467899999998 77752 33 389999999988877322110 11100 0000122222
Q ss_pred HHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CCCcCeEEEecCC-----------HHHHHH
Q 002263 312 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD-----------AHAIAS 378 (946)
Q Consensus 312 ~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~~~~~~~~i~~~~-----------~~~v~~ 378 (946)
.+..+.++++ ... .+-+++. .+..+++++|+++|+++| ++++. +...+.+.++++. +..+.+
T Consensus 251 ~~~~~~~~al--~~~-~~~l~~~-~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T TIGR02539 251 APIVTMMASF--PHV-VERVKRW-DEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYE 325 (370)
T ss_pred cHHHHHHHHH--HHH-HHHHHHH-HHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHH
Confidence 1222333333 111 2223322 333455789999999998 88752 2223334444432 346999
Q ss_pred HHHHcCCe-eeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 379 AAYKIEMN-LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 379 ~L~~~GI~-~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+|.++||. ++.-.++.+|+|+. ..|++|+++++++|..
T Consensus 326 ~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~~ 364 (370)
T TIGR02539 326 ELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFEE 364 (370)
T ss_pred HHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHHH
Confidence 99999997 55322468999984 6799999999999963
No 114
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.81 E-value=3.2e-18 Score=195.55 Aligned_cols=315 Identities=17% Similarity=0.154 Sum_probs=200.5
Q ss_pred cceeecCCCCCCCCCcHHHHHHHHhCCcccc--ccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHH
Q 002263 54 VYKSFIGMGYYNTHVPPVILRNIMENPAWYT--QYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 131 (946)
Q Consensus 54 ~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t--~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea 131 (946)
..++|+|...++...|+++. .+......+. ..+...++...|..+.+.++++.+|+++|.+. +.++++|+.+..+
T Consensus 10 ~s~~YL~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a~~~ 86 (370)
T PRK05937 10 VTNDFLGFSRSDTLVHEVEK-RYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGYMANLG 86 (370)
T ss_pred ECCCccCCCCCHHHHHHHHH-HHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChHHHHHH
Confidence 34678888877666666653 4433211011 12345566888999999999999999999975 4566667655544
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccccccc-cC------CCEeEEEEEcC-CCceeecch
Q 002263 132 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KS------GDVCGVLVQYP-GTEGEVLDY 203 (946)
Q Consensus 132 ~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-i~------~~t~~v~v~~p-n~~G~i~di 203 (946)
+...+ . ++++.|+++..+|+++...++.. ....+.+.++|+++|++ ++ +++.+|++.++ |.+|.+.|+
T Consensus 87 ~~~~~--~-~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl 162 (370)
T PRK05937 87 LCAHL--S-SVTDYVLWDEQVHISVVYSLSVI-SGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPL 162 (370)
T ss_pred HHHHh--C-CCCCEEEEEhhhhHHHHHHHHHc-CCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCH
Confidence 33322 1 26788889999999999998653 22334455567777776 53 34667777877 679999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCCCCC-----Cccc---eEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCc
Q 002263 204 GDFIKNAHANGVKVVMATDLLALTILKPPG-----ELGA---DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 274 (946)
Q Consensus 204 ~~i~~~a~~~gal~~v~a~~~al~~l~~~~-----~~Ga---Di~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~ 274 (946)
++|.++||++|++++|| ..++.|.+...+ .||+ |+.+.+. |.+| ++|+|+++.++ ..+.+..
T Consensus 163 ~eI~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~-~~~~~~~- 233 (370)
T PRK05937 163 EQIIALSKKYHAHLIVD-EAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG------SMGAALLSSSE-VKQDLML- 233 (370)
T ss_pred HHHHHHHHHcCCEEEEE-CCccccccCCCCCchHHhhCCCCCcEEEEechhhhh------cCceEEEcCHH-HHHHHHH-
Confidence 99999999999999994 344655443332 3553 3555665 6553 33567776543 2221100
Q ss_pred eEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 002263 275 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 354 (946)
Q Consensus 275 ~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~ 354 (946)
+..+.+++.++ |. ....++.+++ .++..+| +.+.+++.++.+++++.|...+
T Consensus 234 --------------------~~~~~~~s~~~-~~---~~~~a~~aal--~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~- 285 (370)
T PRK05937 234 --------------------NSPPLRYSTGL-PP---HLLISIQVAY--DFLSQEG-ELARKQLFRLKEYFAQKFSSAA- 285 (370)
T ss_pred --------------------hCCCCeecCCC-CH---HHHHHHHHHH--HHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-
Confidence 00011222221 21 2344444444 4443445 4567788889999998886542
Q ss_pred EEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 355 VEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 355 ~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. .. ...+.+......++.+.|.++||.++.. ..+.+|+|++.+||++||++++++|..
T Consensus 286 ~----~~-~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 286 P----GC-VQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred C----CC-EEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 1 00 1123332112678999999999988743 146899999999999999999999963
No 115
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.81 E-value=7.7e-18 Score=191.82 Aligned_cols=301 Identities=15% Similarity=0.164 Sum_probs=189.2
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
..++++.+++++|++.+ +..++++++...++ +.+. .++++|+++...|.+....+...|++++.++.+.++
T Consensus 46 ~~~l~~~la~~~g~~~i-~~~~g~t~al~~~l---~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 46 IKDFHHDLAEFLGMDEA-RVTPGAREGKFAVM---HSLC-----EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHP 116 (361)
T ss_pred HHHHHHHHHHHcCCceE-EEeCCHHHHHHHHH---HHhc-----CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCC
Confidence 56888999999999654 34455555554333 3321 256889999888877777788999999999998765
Q ss_pred --CCCHHHHHHHHHhcC----CCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccCCC
Q 002263 602 --NINIEELRKAAEANR----DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGAD 673 (946)
Q Consensus 602 --~~D~e~L~~~i~~~~----~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~GaD 673 (946)
.+|+++|+++++++. +++++|++++|+ .+|... |+++|+++||++|+++++|+|+.. +.+ ..+.++|+|
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~--g~~~~~~~~~~~d 193 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH-DAKKIAKVCHEYGVPLLLNGAYTV--GRMPVSGKELGAD 193 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec-cHHHHHHHHHHcCCeEEEECCccc--CCcCCCHHHcCCC
Confidence 899999999996421 378899999996 589998 799999999999999999998752 222 123457899
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+++.++||+|+ +++++|++++++++.+.+....-. +. .. ......+.+. .. .+..+++.+..+ .
T Consensus 194 ~~~~s~~K~l~-----~~~~~G~l~~~~~~~~~l~~~~~~----~~---~~-~~~~~~~~~~-~~-~~~~~~~al~~~-~ 257 (361)
T cd06452 194 FIVGSGHKSMA-----ASAPIGVLATTEEWADIVFRTSQM----FK---IK-EVELLGCTLR-GA-PLVTLMASFPHV-K 257 (361)
T ss_pred EEEecCCcccc-----CCCCeEEEEECHHHHHHHhccccc----cc---cc-eeeeeccccC-ch-HHHHHHHHHHHH-H
Confidence 99999999995 234788999987665544211000 00 00 0000000000 00 111122223222 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEeccccc---ccCCCCHHHHHHHHHHCCcccCCCCCC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSWP 828 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~---~~~g~~~~~i~~~L~~~Gi~~~~~~~p 828 (946)
+.++ ..++...++++++++|+++ +++.-..+ . ..+-+.++...+. .....++.++.++|.++||... ++
T Consensus 258 ~~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~-~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~ 331 (361)
T cd06452 258 ERVK-RWDEEVEKARWFVAELEKIEGIKQLGEKP-K-NHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---KP 331 (361)
T ss_pred HHHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCC-C-CCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---cC
Confidence 2232 3344456778999999875 33321111 1 1112334432110 0012234579999999999842 12
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 829 -VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 829 -~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
....+|++.. ..+++|+++++++|+++.
T Consensus 332 ~~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 332 GLTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CCceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 2356888763 368999999999998764
No 116
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.80 E-value=9.4e-19 Score=179.64 Aligned_cols=308 Identities=14% Similarity=0.162 Sum_probs=214.6
Q ss_pred CcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHH
Q 002263 53 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 132 (946)
Q Consensus 53 ~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~ 132 (946)
.+.+||+|...+|+.+.+..+ .+-+.. . +|-......|+...+.++++.||++-|-+. ..+|+++-.+..++
T Consensus 72 FcaNnYLGLsshPeii~a~~~-aleeyG---a--GlssvrfIcGtq~iHk~LE~kiAqfh~rED--~ilypscfdANag~ 143 (417)
T KOG1359|consen 72 FCANNYLGLSSHPEIINAGQK-ALEEYG---A--GLSSVRFICGTQDIHKLLESKIAQFHGRED--TILYPSCFDANAGA 143 (417)
T ss_pred ecccccccccCChHHHHHHHH-HHHHhC---C--CccceeEEecchHHHHHHHHHHHHHhCCCc--eEEeccccccchHH
Confidence 345689999998888877764 333221 1 455666788999999999999999999887 66776665554444
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccccccc--c---CCCEeEEEEEcC--CCceeecchHH
Q 002263 133 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY--K---SGDVCGVLVQYP--GTEGEVLDYGD 205 (946)
Q Consensus 133 ~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~--i---~~~t~~v~v~~p--n~~G~i~di~~ 205 (946)
.-|+. + +.|-|+.+...|.|+++.++. |+ +..++|+-+++. + +-+.+ +++|.. ++.|.+.|+++
T Consensus 144 feail-~--pedAvfSDeLNhASIIdGirL-ck----ry~h~dv~~l~~~l~~a~k~r~k-lv~TDg~FSMDGdiaPl~e 214 (417)
T KOG1359|consen 144 FEAIL-T--PEDAVFSDELNHASIIDGIRL-CK----RYRHVDVFDLEHCLISACKMRLK-LVVTDGVFSMDGDIAPLEE 214 (417)
T ss_pred HHHhc-C--hhhhhhccccccchhhhhhHH-Hh----hhccchhHHHHHHHHHhhhheEE-EEEecceeccCCCcccHHH
Confidence 44442 2 789999999999999999864 55 344566666654 2 12333 555665 78999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCCCCC-----Ccc----ceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCce
Q 002263 206 FIKNAHANGVKVVMATDLLALTILKPPG-----ELG----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 275 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al~~l~~~~-----~~G----aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~ 275 (946)
|++++++||+|++++ +.++.+.+...| ++| +|++.++. |.+|+ -+.||..+.+.++..|
T Consensus 215 i~~La~kYgaLlfiD-ecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg------a~GGyttgp~~li~ll---- 283 (417)
T KOG1359|consen 215 ISQLAKKYGALLFID-ECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG------ASGGYTTGPKPLISLL---- 283 (417)
T ss_pred HHHHHHhcCcEEEEe-ecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC------CCCCCccCChhHHHHH----
Confidence 999999999999993 334555544332 233 78888886 88864 3457887777766544
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchHH---HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC
Q 002263 276 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA---LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 352 (946)
Q Consensus 276 ~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~---l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 352 (946)
|.++.+++++++. ..+..+..|...+.. .++..+...+++++++..+..
T Consensus 284 -------------------------rqr~RpylFSnslppavV~~a~ka~dllm~s---~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 284 -------------------------RQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS---SKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred -------------------------HhcCCceeecCCCChhhhhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhc
Confidence 2233344444433 334444445555543 345566778899999999888
Q ss_pred CCEEEcCCCC-cCeEEEecCC-HHHHHHHHHHcCCeee-----eec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 353 GTVEVQGLPF-FDTVKVKCAD-AHAIASAAYKIEMNLR-----VVD--SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 353 g~~~~~~~~~-~~~~~i~~~~-~~~v~~~L~~~GI~~~-----~~~--~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
| |++.+..+ ..++.+.... +...++.|.++||+|- .++ ..++|+.++..||+||||+++++|.+
T Consensus 336 G-ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~ 408 (417)
T KOG1359|consen 336 G-FTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSE 408 (417)
T ss_pred C-ceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHH
Confidence 8 99986432 3345554333 7889999999999872 222 35799999999999999999999963
No 117
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=2.3e-17 Score=192.46 Aligned_cols=309 Identities=18% Similarity=0.153 Sum_probs=198.1
Q ss_pred HHHHHHHhhCCCc----ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH------HHH--cCCEE
Q 002263 525 LGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT------AAM--CGMKI 592 (946)
Q Consensus 525 l~~~la~l~G~~~----~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~------a~~--~G~~v 592 (946)
.++..+++++... +++++.+|+++++++++++. +++|+|+..+..||.|..- ..+ .+..+
T Consensus 85 ~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~ 156 (475)
T PLN03226 85 CQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--------QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYF 156 (475)
T ss_pred HHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--------CCCCEEEECCCCcCcchhhhhhhcccccccceEEE
Confidence 4446778888775 57889999999987777653 2568898755444433321 111 22222
Q ss_pred E--EEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc---cC
Q 002263 593 V--SVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TS 666 (946)
Q Consensus 593 v--~v~~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl---~~ 666 (946)
. ..+++ ++|.+|+++|++++.++ +++.|++.. +.+|... |+++|+++||++|++++||+||..++.+. ..
T Consensus 157 ~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~~-S~~s~~~-D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~ 232 (475)
T PLN03226 157 ESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAGA-SAYPRDW-DYARMRKIADKVGALLMCDMAHISGLVAAQEAAS 232 (475)
T ss_pred EeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEec-CcCCCcc-CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCC
Confidence 2 33444 45899999999999753 455555533 4467665 89999999999999999999987554432 12
Q ss_pred CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCC-CCcccCccchhhHHHHHH
Q 002263 667 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL-GTIAAAPWGSALILPISY 745 (946)
Q Consensus 667 pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~-~~i~~~~~g~~~~~~~a~ 745 (946)
|. .++|++++++||||. ||..|+|++++.+.+.+.+...+. .++... ..++. ..+.+++ +...+++..
T Consensus 233 p~-~~~Div~~t~hK~L~------GP~Gg~I~~~~~~~~~~~~g~~~~-~d~~~~-i~~a~~~~~~g~p--~~~~iaal~ 301 (475)
T PLN03226 233 PF-EYCDVVTTTTHKSLR------GPRGGMIFFRKGPKPPKGQGEGAV-YDYEDK-INFAVFPGLQGGP--HNHTIAALA 301 (475)
T ss_pred CC-CCCeEEEecCccccc------CCCceEEEEchhhcccccCCCccH-HHHHHH-hccccCCccCCCc--hHHHHHHHH
Confidence 32 279999999999994 565588998876554332211000 011000 00000 0111111 112233334
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 824 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~ 824 (946)
+.+..+-..|++++.++...++++|++.|++. +.+...+ ...|.+++++.+ .+++..++.+.|.+.||.+..
T Consensus 302 aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~---t~~hi~lv~~~~----~gi~~~~~~~~L~~~~I~~nk 374 (475)
T PLN03226 302 VALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGG---TDNHLVLWDLRP----LGLTGSRVEKVLDLAHITLNK 374 (475)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---CCCCEEEEEccC----CCCCHHHHHHHHHHCCCEECC
Confidence 45666666677788889999999999999874 7765432 224667888753 367888999999999998653
Q ss_pred CC-----CC-CCCEEEEE----cCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 002263 825 MS-----WP-VPGTLMIE----PTESESKEELDRYCDALISIREEIAQI 863 (946)
Q Consensus 825 ~~-----~p-~~~~lri~----~t~~~t~~eid~~~~aL~~i~~e~~~~ 863 (946)
-. .| .+.++|+. .+...+++|++++.+.|.++++....+
T Consensus 375 ~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~~~~ 423 (475)
T PLN03226 375 NAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIALKI 423 (475)
T ss_pred CCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 21 11 24678883 344567899999999999998865443
No 118
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.79 E-value=2.3e-18 Score=193.02 Aligned_cols=299 Identities=20% Similarity=0.244 Sum_probs=180.5
Q ss_pred HHHHHHHHHHhhCCC----cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH---HH-------HHH
Q 002263 522 FNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP---AT-------AAM 587 (946)
Q Consensus 522 ~~el~~~la~l~G~~----~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~---~~-------a~~ 587 (946)
..-.++.++++||.+ .++++|.||+.+++++++|+. +++|+|+..+..||-|. .. +..
T Consensus 68 E~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl--------~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 68 EELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL--------KPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp HHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred HHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH--------hhcCcEEecChhhccccccccccccccccccc
Confidence 333667888999999 789999999999987777664 25689997777776553 22 234
Q ss_pred cCCEEEEEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccc---cc
Q 002263 588 CGMKIVSVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VG 663 (946)
Q Consensus 588 ~G~~vv~v~~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~---~g 663 (946)
..++++.+++| +++.+|.+++++.+.+++++ +|++...++.-.+ |++++.+||++.|+++++|.+|..++ +.
T Consensus 140 ~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPk--lIi~G~S~y~~~~--d~~~~reIad~vga~l~~D~sH~~GLIa~g~ 215 (399)
T PF00464_consen 140 LYFESVPYPVDPDTGLIDYDELEKLAKEHKPK--LIICGASSYPRPI--DFKRFREIADEVGAYLMADISHIAGLIAGGL 215 (399)
T ss_dssp HHSEEEEEEB-TTTSSB-HHHHHHHHHHH--S--EEEEE-SSTSS-----HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS
T ss_pred ceEEEEeeeeecCCCeECHHHHHHHHhhcCCC--EEEECchhccCcc--CHHHHHHHHHhcCcEEEecccccccceehhe
Confidence 56789999998 45999999999999976555 4666554443333 79999999999999999999996444 23
Q ss_pred ccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCC-CCCccccCCCCCCCCCCCC-CCCcccCccchhhHH
Q 002263 664 LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQP-LGTIAAAPWGSALIL 741 (946)
Q Consensus 664 l~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~l-p~~~v~~~~d~~~~~~~~~-~~~i~~~~~g~~~~~ 741 (946)
+..|-.. +||++++.|||| .||..|+|.+++....-- ++.... .++..+ -.++ ++.+.+++. ...++
T Consensus 216 ~~~P~~~-ADvvt~sThKtl------~GPrggiI~~~~~~~~~~~~~~~~~--~~l~~~-I~~avfP~~qg~~h-~~~ia 284 (399)
T PF00464_consen 216 FPNPFPY-ADVVTGSTHKTL------RGPRGGIILTNKGSKNVDKKGKEID--EELAEK-IDSAVFPGLQGGPH-MHRIA 284 (399)
T ss_dssp S--GCCT-SSEEEEESSGGG-------SSS-EEEEES-SEEEE-TTS-EEE--HHHHHH-HHHHHTTTT-SS---HHHHH
T ss_pred ecCcccc-ceEEEeeccccc------cccCceEEEEcCCccccCCcccccH--HHHHHH-hccccCCCcccCcc-hhHHH
Confidence 4577765 999999999998 589999999993211100 000000 000000 0000 011111111 12233
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
+.|.+...++ ...+++.+++.+.||+.|++.|.+. +.++.. ++..|.+++|++. .++++.++.++|.+.||
T Consensus 285 alAval~ea~-~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~g---gTd~H~vlvd~~~----~~~~g~~a~~~Le~~gI 356 (399)
T PF00464_consen 285 ALAVALKEAL-SPEFKEYAKQVVKNAKALAEALQERGFKVVTG---GTDNHQVLVDLRS----FGIDGKEAEKALEEAGI 356 (399)
T ss_dssp HHHHHHHHHT-SHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGG---S-SSSEEEEEGGG----GTS-HHHHHHHHHHTTE
T ss_pred HHHHHHhccc-CHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEC---CCCCCeEEEEecc----cccchHHHHHHHHhcCe
Confidence 4444444433 4456899999999999999999885 888653 3567889999874 36788999999999999
Q ss_pred ccCC--CCC---C-CCCEEEEEcCCCC----CHHHHHHHHH
Q 002263 821 HGPT--MSW---P-VPGTLMIEPTESE----SKEELDRYCD 851 (946)
Q Consensus 821 ~~~~--~~~---p-~~~~lri~~t~~~----t~~eid~~~~ 851 (946)
.+.. +.+ | .+..|||...+.+ .++|+.++.+
T Consensus 357 ~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 357 IVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp E-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred eecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 8742 211 1 3578999987654 3455555544
No 119
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.79 E-value=3e-17 Score=189.75 Aligned_cols=297 Identities=20% Similarity=0.261 Sum_probs=189.9
Q ss_pred HHHHHHHH----HHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH-HHH--HcCCEE
Q 002263 520 EMFNNLGE----WLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAA--MCGMKI 592 (946)
Q Consensus 520 ~~~~el~~----~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~-~a~--~~G~~v 592 (946)
+...++++ .+++++|.+.+.+.+++|+.++.+++.++. +++++|+++...|+++.. .+. ..+...
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~--------~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~ 141 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL--------KPGDTILGMSLSHGGHLTHGAKVSLSGKWY 141 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------CCCCEEEEcCccceeeeecCCcceecccee
Confidence 34555666 999999998776677889888766655542 367899999988876311 111 122222
Q ss_pred --EEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCC
Q 002263 593 --VSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPG 668 (946)
Q Consensus 593 --v~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg 668 (946)
+.++++. ++.+|+++++++++. .++++|+++.+. +|..- |+++|.++||++|+++++|+||..+..+.. .++
T Consensus 142 ~~~~~~~~~~~~~~d~~~le~~l~~--~~~klVi~~~~~-~g~~~-dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~ 217 (416)
T PRK13034 142 NAVQYGVDRLTGLIDYDEVEELAKE--HKPKLIIAGFSA-YPREL-DFARFREIADEVGALLMVDMAHIAGLVAAGEHPN 217 (416)
T ss_pred eeEEcccccccCCcCHHHHHHHHhh--cCCeEEEECCCc-ccccc-CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCC
Confidence 3444443 467999999999964 357778776654 57665 899999999999999999999864433221 122
Q ss_pred c-cCCCEEEeCCCcccccCCCCCCCcceeEEEecc-cCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 669 Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 669 ~-~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
. .++|++++++||+|+ ||..|++++++. +...+.... . .+..+++. ....++.+.+
T Consensus 218 ~~~~~Di~~~s~~K~l~------g~~GG~v~~~~~~~~~~~~~~~-~-------------~~~~~~~~--~~~~aa~~~a 275 (416)
T PRK13034 218 PFPHAHVVTTTTHKTLR------GPRGGMILTNDEEIAKKINSAV-F-------------PGLQGGPL--MHVIAAKAVA 275 (416)
T ss_pred CCCCceEEEEeCcccCC------CCCCeEEEECcHHHHHHHHhhc-C-------------CcccCCcc--HHHHHHHHHH
Confidence 1 258999999999984 344466666543 222211000 0 00001100 1122222333
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT- 824 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~- 824 (946)
.+..+.. +..+..++...++++|+++|++. +.+...+ ...|...+.+.. .+.+...+.++|.++||++..
T Consensus 276 l~~~~~~-~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~---~~t~i~~v~~~~----~~~~~~~~~~~L~~~GI~v~~~ 347 (416)
T PRK13034 276 FGEALQP-EFKTYAKQVIANAQALAEVLKERGYDLVSGG---TDNHLLLVDLRP----KGLSGKDAEQALERAGITVNKN 347 (416)
T ss_pred HHHHhCh-hHHHHHHHHHHHHHHHHHHHHHcCCEeccCC---CCCcEEEEEcCC----CCCCHHHHHHHHHhCCcEEecc
Confidence 4444432 33455677889999999999875 5553211 123345565542 245677888999999998754
Q ss_pred -----CCCC-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHH
Q 002263 825 -----MSWP-VPGTLMIEPTE----SESKEELDRYCDALISIRE 858 (946)
Q Consensus 825 -----~~~p-~~~~lri~~t~----~~t~~eid~~~~aL~~i~~ 858 (946)
..+| ++..||+++++ .++++|+++++++|.+++.
T Consensus 348 ~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 348 TVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 2334 45689999988 6679999999999998865
No 120
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=3.4e-17 Score=190.18 Aligned_cols=292 Identities=21% Similarity=0.234 Sum_probs=189.5
Q ss_pred HHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-----HHHcCCEEEEEcCCC
Q 002263 525 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 599 (946)
Q Consensus 525 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-----a~~~G~~vv~v~~~~ 599 (946)
.++.+++++|.+...+.+++|+++..+++ +.+. +++++|+++...|+.+... ....|++++.++++.
T Consensus 76 ~~~~la~~~g~~~~~i~~~sgt~al~~~l---~~l~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 147 (416)
T PRK00011 76 AIDRAKELFGAEYANVQPHSGSQANAAVY---FALL-----KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE 147 (416)
T ss_pred HHHHHHHHhCCCceeeecCCchHHHHHHH---HHhc-----CCCCEEEEeccccCCccccccccccccceeeEeecCcCc
Confidence 56689999999876566667776654333 3321 2568999999888765432 234567888888874
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccc---ccCCCccCCCEE
Q 002263 600 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTSPGYIGADVC 675 (946)
Q Consensus 600 -~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g---l~~pg~~GaDi~ 675 (946)
++.+|++++++++++ .++++|+++.++ +|... |+++|+++|+++|+++++|+||..++.. ...+.. ++|++
T Consensus 148 ~~~~~d~~~l~~~i~~--~~~k~v~~~~~~-~~~~~-~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 148 ETGLIDYDEVEKLALE--HKPKLIIAGASA-YSRPI-DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred ccCCcCHHHHHHHHHh--cCCCEEEECCCc-CCCcc-CHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 588999999999973 367778876554 46655 7999999999999999999987543321 112223 78999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
++++||+| +||.+|+++++ +++.+.+.... .....++ +. ....++...+.+ ....+
T Consensus 223 ~~S~~K~l------~g~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~-~~-~~~~aa~~~a~~-~~~~~ 279 (416)
T PRK00011 223 TTTTHKTL------RGPRGGLILTNDEELAKKINSAV--------------FPGIQGG-PL-MHVIAAKAVAFK-EALEP 279 (416)
T ss_pred EecCCcCC------CCCCceEEEeCCHHHHHHHHHHh--------------CccccCC-cc-HHHHHHHHHHHH-HHHhh
Confidence 99999987 35767788875 45554432100 0000111 10 111122122222 33345
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC------
Q 002263 755 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW------ 827 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~------ 827 (946)
++.+..++..++++++++.|++. +++. .+ +...|-+.+++.+ .+.+..++.+.|.++||.+.....
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~--~~~~~~~~i~~~~----~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~ 352 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERGFRVV-SG--GTDNHLVLVDLRS----KGLTGKEAEAALEEANITVNKNAVPFDPRS 352 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeee-ec--CCCCeEEEEeCcc----cCCCHHHHHHHHHHcCcEEccCcCCCCCCC
Confidence 67777888889999999999875 4442 11 1122445566532 234678899999999998753211
Q ss_pred C-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHHH
Q 002263 828 P-VPGTLMIEPTE----SESKEELDRYCDALISIREE 859 (946)
Q Consensus 828 p-~~~~lri~~t~----~~t~~eid~~~~aL~~i~~e 859 (946)
| .+..+|++... ..|++|+++++++|++++..
T Consensus 353 ~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 353 PFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 1 24568986533 35689999999999987553
No 121
>PRK07179 hypothetical protein; Provisional
Probab=99.78 E-value=1.6e-17 Score=192.39 Aligned_cols=270 Identities=17% Similarity=0.178 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---c
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---D 175 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~---~ 175 (946)
+...++++.+|+++|.+. +.++++|+.+.++++.++. . ++++|+++...|+++...++. .|++++.+ |
T Consensus 99 ~~~~~le~~la~~~g~~~--~~~~~sG~~An~~~l~~l~-~--~g~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d 169 (407)
T PRK07179 99 SPKPQFEKKLAAFTGFES--CLLCQSGWAANVGLLQTIA-D--PNTPVYIDFFAHMSLWEGVRA----AGAQAHPFRHND 169 (407)
T ss_pred hHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhC-C--CCCEEEEECCcCHHHHHHHHH----CCCeEEEecCCC
Confidence 355667789999999875 5678999988777666553 2 689999999999999877542 46665554 5
Q ss_pred cccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCC-----CCc----cceEEEec
Q 002263 176 LKDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-----GEL----GADIVVGS 243 (946)
Q Consensus 176 ~~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~-----~~~----GaDi~v~s 243 (946)
++++++ +++ ++++|++.++ |.+|.+.|+++|.++|+++|+++++| +.++++..... ..+ ++|++++|
T Consensus 170 ~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S 248 (407)
T PRK07179 170 VDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVD-ESHSLGTHGPQGAGLVAELGLTSRVHFITAS 248 (407)
T ss_pred HHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHhcCCCCCCCEEEee
Confidence 566766 654 4777888777 67999999999999999999999994 23344432111 122 46999998
Q ss_pred c-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHH
Q 002263 244 A-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 322 (946)
Q Consensus 244 ~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y 322 (946)
. |.++. ..|++++++++.+.++.. ..+ + ...+|.+ ++...++.+++
T Consensus 249 ~sK~~g~-------~~G~l~~~~~~~~~~~~~---------~~~-~------------~~~~t~~---~~~~aa~~aal- 295 (407)
T PRK07179 249 LAKAFAG-------RAGIITCPRELAEYVPFV---------SYP-A------------IFSSTLL---PHEIAGLEATL- 295 (407)
T ss_pred chHhhhc-------cCeEEEeCHHHHHHHHHh---------CcC-e------------eeCCCCC---HHHHHHHHHHH-
Confidence 7 87742 368899988776654210 000 0 0112222 13333333333
Q ss_pred HHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee-------cC
Q 002263 323 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DS 392 (946)
Q Consensus 323 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~-------~~ 392 (946)
.++. ..+++.+++.++.++|++.|+++| +++.+.. ..+.+..+. +..+.+.|.++||.++.. ..
T Consensus 296 -~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~--~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~ 369 (407)
T PRK07179 296 -EVIE--SADDRRARLHANARFLREGLSELG-YNIRSES--QIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNR 369 (407)
T ss_pred -HHHh--cCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCC--CEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCC
Confidence 3331 124567888999999999999987 7766432 234444432 567888999999975322 13
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 393 NTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 393 ~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.+|+|++..+|++|+++++++|..
T Consensus 370 ~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 370 NLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999974
No 122
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.78 E-value=6.2e-18 Score=190.29 Aligned_cols=266 Identities=18% Similarity=0.208 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 177 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~- 177 (946)
..|.|+|+.+|+++|++.+.+ +++|+|.++.++++++. . +||+|++++++|.|+...+.. .|+++++++++
T Consensus 66 G~I~eAe~~aA~~fGAd~t~f-lvnGsT~g~~a~i~a~~-~--~gd~VLv~RN~HkSv~~alil----~ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFF-LVNGSTSGNQAMIMALC-R--PGDKVLVDRNCHKSVYNALIL----SGAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEE-ESSHHHHHHHHHHHHHT-T--TTCEEEEETT--HHHHHHHHH----HTEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCeEEE-EecCchHHHHHHHHHhc-C--CCCEEEEcCCcHHHHHHHHHH----cCCeEEEecCCc
Confidence 468899999999999987544 77899999999998874 3 899999999999999987643 48888887552
Q ss_pred -----------------cccc-c--CCCEeE---EEEEcCCCceeecchHHHHHHHHhCCcEEEEE----ecCccccCCC
Q 002263 178 -----------------DIDY-K--SGDVCG---VLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 230 (946)
Q Consensus 178 -----------------~l~~-i--~~~t~~---v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~----a~~~al~~l~ 230 (946)
++++ + .++.++ |++++|||+|.+.|+++|+++||++|.+++|+ +++.-..+..
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 2333 2 344444 99999999999999999999999999999993 3322222233
Q ss_pred CCCCccce-------EEEecc-ccccccCCCCCCceEEEEEchhh-hhcCCCceEeEeecCCCCcceEEecccccccccc
Q 002263 231 PPGELGAD-------IVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 301 (946)
Q Consensus 231 ~~~~~GaD-------i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~-~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr 301 (946)
+.-.+||| +++.|. |.++... ++++|+++.+. ++. + |.
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~alt-----Qts~lh~~~~~~v~~----------~------------------~~ 264 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPALT-----QTSMLHVKGDRIVDH----------E------------------RV 264 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS-T-----T-EEEEEETCCCTTH----------H------------------HH
T ss_pred chhhccCccccccceeeeechhhcccccc-----cceEEEecCCCcccH----------H------------------HH
Confidence 45679999 999999 6665432 47899988653 110 0 00
Q ss_pred cccCCCccchHHHHHHHHHHH--HHHh-ChhhHHHHHHHHHHHHHHHHHHH---hcCCCEEEcCC------C--------
Q 002263 302 DKATSNICTAQALLANMAAMY--AVYH-GPEGLKTIAQRVHGLAGTFALGL---KKLGTVEVQGL------P-------- 361 (946)
Q Consensus 302 e~aTsni~t~~~l~a~~aa~y--~~~~-g~~Gl~~i~~~~~~~a~~l~~~L---~~~g~~~~~~~------~-------- 361 (946)
..+-+-+-|+++.|.+||++- ..++ +.+| +++.++..+++..++++| +++.+++++++ .
T Consensus 265 ~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 343 (417)
T PF01276_consen 265 NEALSMHQTTSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGE 343 (417)
T ss_dssp HHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccc
Confidence 111112335578888999882 2455 4455 567777888999999999 55533777632 1
Q ss_pred -------------CcC--eEEEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHH
Q 002263 362 -------------FFD--TVKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLE 406 (946)
Q Consensus 362 -------------~~~--~~~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~e 406 (946)
.+| -++|.++ + +..+.+.|+++||.++..+...|.+-++..+|++
T Consensus 344 ~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 344 NWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred cchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 023 2566641 2 6789999999999999988899999999888875
No 123
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.78 E-value=2.7e-17 Score=188.77 Aligned_cols=309 Identities=14% Similarity=0.136 Sum_probs=200.5
Q ss_pred CCcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHH
Q 002263 52 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 131 (946)
Q Consensus 52 n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea 131 (946)
|...++|+|...+|+...+.+. .+. .|.+.+ ..++..-|+...+.++|+.+|+++|.+. +.++.+|+++..+
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~-a~~---~~g~~~--~~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALE-SLS---HYGCGS--CGPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDGASTTSS 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHH-HHH---HhCCCC--cccccccCChHHHHHHHHHHHHHhCCCc--EEEecCcHHHHHH
Confidence 4456789999987765555543 444 244433 2344446777788899999999999875 6677888777766
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec---cccccc----cC-----------CCEeEEEEEc
Q 002263 132 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY----KS-----------GDVCGVLVQY 193 (946)
Q Consensus 132 ~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~---~~~l~~----i~-----------~~t~~v~v~~ 193 (946)
+++++ .+ +||+||+++..|++++..++ ++ +.++++++ +++++. +. ++++.|++..
T Consensus 74 ~i~~l-~~--~GD~Vl~~~~~h~s~~~~~~-l~---~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 74 TVAAF-AK--RGDLLVVDRGVNEALLVGVS-LS---RANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred HHHHh-CC--CCCEEEEeccccHHHHHHHH-Hc---CCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 66665 23 89999999999999988873 22 34555443 333332 21 3577788776
Q ss_pred C-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCC-----------CCccceEEEecc-ccccccCCCCCCceEE
Q 002263 194 P-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-----------GELGADIVVGSA-QRFGVPMGYGGPHAAF 260 (946)
Q Consensus 194 p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~-----------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~ 260 (946)
+ |..|.+.|+++|.++||++|+++++| +.++++.+... ...|+|++++|. |.++ |-+|+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~livD-e~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-------~~gg~ 218 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLILD-ESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-------SVGGM 218 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEEE-CcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-------ccCcE
Confidence 6 78999999999999999999999994 45555544221 134789999996 6553 34567
Q ss_pred EEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccch--HHH--HHHHHHHHHHHhChhhHHHHHH
Q 002263 261 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA--QAL--LANMAAMYAVYHGPEGLKTIAQ 336 (946)
Q Consensus 261 l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~--~~l--~a~~aa~y~~~~g~~Gl~~i~~ 336 (946)
+.+++++++.+... +..++.+. ++. ++..+++ ..+. + .+++.+
T Consensus 219 v~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~p~~~~aa~~al--~~~~-~-~~~~~~ 265 (392)
T PLN03227 219 TVGSEEVVDHQRLS-----------------------------GSGYCFSASAPPFLAKADATAT--AGEL-A-GPQLLN 265 (392)
T ss_pred EecCHHHHHHHHHh-----------------------------CcCccccCCCCHHHHHHHHHHH--HHHh-c-CHHHHH
Confidence 77787765443100 00001111 121 1222222 1111 1 245677
Q ss_pred HHHHHHHHHHHHHhcCCCEEEc----------CCCCcCeEEEecCC------------HHHHHHHHHHcCCeeee-----
Q 002263 337 RVHGLAGTFALGLKKLGTVEVQ----------GLPFFDTVKVKCAD------------AHAIASAAYKIEMNLRV----- 389 (946)
Q Consensus 337 ~~~~~a~~l~~~L~~~g~~~~~----------~~~~~~~~~i~~~~------------~~~v~~~L~~~GI~~~~----- 389 (946)
+.+++.++|+++|++.+ +..+ .......+.|.+.+ ..++.++|.++||.+..
T Consensus 266 ~l~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 344 (392)
T PLN03227 266 RLHDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHV 344 (392)
T ss_pred HHHHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEeccccc
Confidence 88899999999998644 3311 11112234444432 14888999999997742
Q ss_pred ------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 ------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+++..+|++++..+|++||++++++|..
T Consensus 345 ~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 345 KKFLQLVPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred CCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 2357899999999999999999999974
No 124
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=3.7e-17 Score=186.70 Aligned_cols=351 Identities=16% Similarity=0.160 Sum_probs=220.6
Q ss_pred CHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccc-----cCccccccCCCCcccccccHHHHHHHHHHHHHH
Q 002263 457 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPV-----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCT 531 (946)
Q Consensus 457 se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~-----~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~ 531 (946)
...++++..+++...... ...|.||.|.+.++...+.... ..+.+ .|+| .+|..++.+.+.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~--~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~------~~G~~~LReaia~~~~~ 80 (393)
T COG0436 10 YTFAVLAEAKAAAELKGK--EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTP------SAGIPELREAIAEKYKR 80 (393)
T ss_pred hhHHHHhHHHHHHHhcCC--CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCC------CCCCHHHHHHHHHHHHH
Confidence 344455543344333221 3567888888876655554431 11112 3333 57888888888889998
Q ss_pred hhCCCc--cc-ccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC---CCCCCC
Q 002263 532 ITGFDS--FS-LQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD---AKGNIN 604 (946)
Q Consensus 532 l~G~~~--~~-l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~---~~g~~D 604 (946)
..|.+. .. +..+.|+ +|.+.+ +.++. .++|+||+|++.+.++.....++|.+++.++++ .++.+|
T Consensus 81 ~~~~~~~~~~eiivt~Ga~~al~~~---~~a~~-----~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d 152 (393)
T COG0436 81 RYGLDVDPEEEIIVTAGAKEALFLA---FLALL-----NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPD 152 (393)
T ss_pred HhCCCCCCCCeEEEeCCHHHHHHHH---HHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCC
Confidence 888543 23 5555554 444333 33322 266899999999999999999999999999975 368999
Q ss_pred HHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccc-ccccc--ccCCCcc-C-CC--E
Q 002263 605 IEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVG--LTSPGYI-G-AD--V 674 (946)
Q Consensus 605 ~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~-~a~~g--l~~pg~~-G-aD--i 674 (946)
+++|+++++ ++|++|++++| |.+|.+- +.+++|+++|++||++++.|.++. ....+ +.+.... + .| |
T Consensus 153 ~~~l~~~i~---~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i 229 (393)
T COG0436 153 LEDLEAAIT---PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTI 229 (393)
T ss_pred HHHHHhhcC---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEE
Confidence 999999997 79999999999 5788885 369999999999999999999753 11222 1111111 1 23 4
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc-
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG- 752 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG- 752 (946)
.+.|+.|+|++ .|+++|+++++ +.+.+.+- . + +....+|++...|.. +.+.|..-.
T Consensus 230 ~i~s~SK~~~m----tGwRvG~~v~~~~~l~~~~~-~-~------------~~~~~~~~~~~~Q~a----a~~aL~~~~~ 287 (393)
T COG0436 230 TINSFSKTYGM----TGWRIGWVVGPPEELIAALR-K-L------------KSYLTSCAPTPAQYA----AIAALNGPQS 287 (393)
T ss_pred EEecccccccc----cccceeEeecChHHHHHHHH-H-H------------HHhcccCCCHHHHHH----HHHHhcCccc
Confidence 45678898875 48999999998 55554332 0 0 011122332112221 112221110
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-Cccc-CCCCCC
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHG-PTMSWP 828 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi~~-~~~~~p 828 (946)
.+.+....+....+++.+.++|.+. +.+.. .+.+.++ ..++++. ..+..+++++|.++ |+.+ |...|.
T Consensus 288 ~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~-~p~Ga~Y--~~~~i~~-----~~d~~~f~~~Ll~~~gV~v~PG~~Fg 359 (393)
T COG0436 288 DEVVEEMREEYRERRDLLVEALNEIGGLSVVK-PPEGAFY--LFPKIPE-----LLDSEEFAKKLLEEAGVAVVPGSGFG 359 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-CCCeeEE--EEeecCC-----CCCHHHHHHHHHHhCCEEEecccccC
Confidence 1234444456667888999999875 44322 1234332 3345542 25788999998864 7874 554553
Q ss_pred ---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 829 ---VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 829 ---~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..+.+|++.... .+++++.++.+.+.++.
T Consensus 360 ~~~g~~~vRis~~~~--~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 360 EPPGEGYVRLSLATS--EETLEEALRRLARFLAE 391 (393)
T ss_pred CCCCCCeEEEEEecC--HHHHHHHHHHHHHHHHh
Confidence 237899998754 47778877777776554
No 125
>PLN02483 serine palmitoyltransferase
Probab=99.78 E-value=5.4e-17 Score=190.89 Aligned_cols=314 Identities=16% Similarity=0.197 Sum_probs=202.8
Q ss_pred cceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHH
Q 002263 54 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 133 (946)
Q Consensus 54 ~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~ 133 (946)
...||+|.+..+...++.+.+.+.. +.++ ...+....|+...+.++++.+|+++|.+. +.++.+|+++..+++
T Consensus 106 ~s~~YLgl~~~~~~~~~~~~~ai~~---~g~~--~~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~G~~an~~~i 178 (489)
T PLN02483 106 GSYNYLGFAAADEYCTPRVIESLKK---YSAS--TCSSRVDGGTTKLHRELEELVARFVGKPA--AIVFGMGYATNSTII 178 (489)
T ss_pred ecCCccCcCCCCHHHHHHHHHHHHH---hCCC--CCccccccCCcHHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHH
Confidence 3457999986443344444445553 2222 12334456778889999999999999765 667777776665544
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---ccccc-c-------CCCE-----eEEEEEcC--C
Q 002263 134 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-K-------SGDV-----CGVLVQYP--G 195 (946)
Q Consensus 134 la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l~~-i-------~~~t-----~~v~v~~p--n 195 (946)
.++ .. +||+|++++..|++++..++ ..|++++.++. +++++ + .++| +.+++..+ |
T Consensus 179 ~al-~~--~Gd~Vi~d~~~h~s~~~~~~----~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s 251 (489)
T PLN02483 179 PAL-IG--KGGLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS 251 (489)
T ss_pred HHh-CC--CCCEEEEcchhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence 444 23 89999999999999988764 35888887754 34433 2 1333 55555544 6
Q ss_pred CceeecchHHHHHHHHhCCcEEEEEecCccccCCCC----------CCCccceEEEecc-ccccccCCCCCCceEEEEEc
Q 002263 196 TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATS 264 (946)
Q Consensus 196 ~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~----------~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~ 264 (946)
+.|.+.|+++|+++|+++|+++++| +.++++.+.. ....++||+++|. |.|+.+ .|+++.+
T Consensus 252 ~~G~~~~l~~I~~la~~~~~~livD-Ea~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~-------GG~i~~~ 323 (489)
T PLN02483 252 MEGELCKLPEIVAVCKKYKAYVYLD-EAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC-------GGYIAGS 323 (489)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEE-CcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC-------ceEEEcC
Confidence 7999999999999999999999994 3445443221 1124679999997 888631 2799988
Q ss_pred hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH-hChhh---HHHHHHHHHH
Q 002263 265 QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY-HGPEG---LKTIAQRVHG 340 (946)
Q Consensus 265 ~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~-~g~~G---l~~i~~~~~~ 340 (946)
+++++.+.... +.+. ..++ +++....+..+++ .+ .+.+| .++..++..+
T Consensus 324 ~~li~~l~~~~----------~~~~------------~~~~---~~p~~~~~~~aaL--~~l~~~~g~~~~~~~~~~l~~ 376 (489)
T PLN02483 324 KELIQYLKRTC----------PAHL------------YATS---MSPPAVQQVISAI--KVILGEDGTNRGAQKLAQIRE 376 (489)
T ss_pred HHHHHHHHHhC----------cccc------------ccCC---cCHHHHHHHHHHH--HHHHhCccccchHHHHHHHHH
Confidence 88877652100 0000 0011 1112222233333 22 22222 2345677889
Q ss_pred HHHHHHHHHhcCCCEEEcCCCCcCeEEEecC--C-HHHHHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHH
Q 002263 341 LAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--D-AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDK 410 (946)
Q Consensus 341 ~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~--~-~~~v~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid~ 410 (946)
+.++|++.|+++| +++........+.+... . ..++.+.|.++||.+... ..+.+|++++..+|++||++
T Consensus 377 ~~~~l~~~L~~~G-~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~ 455 (489)
T PLN02483 377 NSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIK 455 (489)
T ss_pred HHHHHHHHHHHCC-CcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHH
Confidence 9999999999997 87764322122222222 2 568999999999987532 12679999999999999999
Q ss_pred HHHHHhC
Q 002263 411 LFIVFAG 417 (946)
Q Consensus 411 ll~~l~~ 417 (946)
++++|..
T Consensus 456 ~l~~L~~ 462 (489)
T PLN02483 456 ALEVISE 462 (489)
T ss_pred HHHHHHH
Confidence 9999974
No 126
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.77 E-value=2.8e-17 Score=185.97 Aligned_cols=264 Identities=15% Similarity=0.125 Sum_probs=187.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCC--CcceEEcccHHHHHHHHHHHhccc-----------cCCCCEEEEcCCCCHHHHHH
Q 002263 93 IAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-----------KGKKKTFIIASNCHPQTIDI 159 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~--~~~~sl~~~~Ta~~ea~~la~~~~-----------~~~gd~vvv~~~~Hps~~~~ 159 (946)
.+.+..+...++.+++++++|.+ .+++.++.|||.+...++.+.+.. .+.++.|+++...|+++...
T Consensus 32 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~ 111 (345)
T cd06450 32 ESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKA 111 (345)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHH
Confidence 45666777788889999999986 457888999997766555544311 01234788999999998877
Q ss_pred HHHhhcCCCeEEEEecc--------ccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecC
Q 002263 160 CITRADGFDIKVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDL 223 (946)
Q Consensus 160 ~~~~a~~~gi~v~~~~~--------~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~ 223 (946)
++. .|++++.++. ++|++ +++ ++++|++++| |.+|.+.|+++|+++||++|+++++++ .
T Consensus 112 ~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~-a 186 (345)
T cd06450 112 AAY----LDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA-A 186 (345)
T ss_pred HHH----HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec-h
Confidence 653 3666666553 34555 554 7888888887 579999999999999999999999943 2
Q ss_pred ccccCCC-CC------CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccc
Q 002263 224 LALTILK-PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 295 (946)
Q Consensus 224 ~al~~l~-~~------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tr 295 (946)
++.+.+. .. ...++|+++.++ |++++|+ +.|+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-----g~g~~~~~------------------------------- 230 (345)
T cd06450 187 YGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-----GCSAVLVR------------------------------- 230 (345)
T ss_pred hhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc-----chHHHHHH-------------------------------
Confidence 2333221 11 113799999888 6665553 34454332
Q ss_pred cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC----
Q 002263 296 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA---- 371 (946)
Q Consensus 296 e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~---- 371 (946)
..++.++ +.+++.+|++++.++..++++++++.|+++++++++.++..+.+.|..+
T Consensus 231 ------------------~~~~~~~--l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~ 290 (345)
T cd06450 231 ------------------ALKLWAT--LRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVK 290 (345)
T ss_pred ------------------HHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcch
Confidence 1122222 3677889999999999999999999999985488876544555666543
Q ss_pred -C--HHHHHHHHHHcCCe-eeee---cCCeEEEEeccC-CCHHHHHHHHHHHhC
Q 002263 372 -D--AHAIASAAYKIEMN-LRVV---DSNTVTASFDET-TTLEDVDKLFIVFAG 417 (946)
Q Consensus 372 -~--~~~v~~~L~~~GI~-~~~~---~~~~lris~~~~-~t~edid~ll~~l~~ 417 (946)
+ ..++.++|.++|+. +... .++.+|+|++.+ +|++|+++++++|..
T Consensus 291 ~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 291 LDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 2 56899999998654 4322 246899999987 599999999999863
No 127
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.77 E-value=4.5e-17 Score=187.72 Aligned_cols=296 Identities=18% Similarity=0.261 Sum_probs=195.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
.|..+...++++.+++++|.+.. +..++|+++..+++.++ . +++|+|+++...|.++...+.+.+.+.+.+
T Consensus 79 ~G~~~~~~~le~~ia~~~g~~~~-ii~~~~~~a~~~~~~~l---~-----~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~ 149 (393)
T TIGR01822 79 CGTQDIHKELEAKIAAFLGTEDT-ILYASCFDANGGLFETL---L-----GAEDAIISDALNHASIIDGVRLCKAKRYRY 149 (393)
T ss_pred cCChHHHHHHHHHHHHHhCCCcE-EEECchHHHHHHHHHHh---C-----CCCCEEEEeccccHHHHHHHHhcCCceEEe
Confidence 36667778899999999998754 33456666664433332 1 256899999998888877777888777655
Q ss_pred cCCCCCCCCHHHHHHHHHhc---CCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc------
Q 002263 596 GTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------ 665 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~------ 665 (946)
+ .+|+++|++++++. +.+|++|++..+ |.+|.+. ++++|+++|++||+++++|+++..+..+..
T Consensus 150 ~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~-~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~ 223 (393)
T TIGR01822 150 A-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA-PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHE 223 (393)
T ss_pred C-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC-CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHH
Confidence 4 37999999999742 227888888766 5789998 799999999999999999999743322211
Q ss_pred CCC-ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHH
Q 002263 666 SPG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 666 ~pg-~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
..+ ..+.|+++.++||+| +|+++|++++++++.+.+.... .....+ ++. ....++++
T Consensus 224 ~~~~~~~~di~~~s~sK~l------~g~r~G~~~~~~~~~~~l~~~~-----------~~~~~~--~~~---~~~~~~a~ 281 (393)
T TIGR01822 224 LCGVMGRVDIITGTLGKAL------GGASGGFTTARKEVVELLRQRS-----------RPYLFS--NSL---PPAVVGAS 281 (393)
T ss_pred hcCCCCCCeEEEEEChHHh------hCCCcEEEEeCHHHHHHHHHhC-----------ccceec--CCC---CHHHHHHH
Confidence 011 125799999999987 3467799988876655432100 000000 010 11112223
Q ss_pred HHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 745 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 745 ~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
.+.+..+ ++..+..++...+++++.+.|++. +.+. ++.++. +.+.+.. +.+..+++++|.++||.+.
T Consensus 282 ~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~i~~~~-----~~~~~~l~~~L~~~gI~v~ 349 (393)
T TIGR01822 282 IKVLEML--EASNELRDRLWANTRYFRERMEAAGFDIK--PADHPI---IPVMLYD-----AVLAQRFARRLLEEGIYVT 349 (393)
T ss_pred HHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCeeEe
Confidence 3444443 233455566678889999999874 4432 112222 2222221 1346789999999999875
Q ss_pred CCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 824 TMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 824 ~~~~p~----~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
...||. ...+|++++..+|++|||+++++|+++.+++
T Consensus 350 ~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 350 GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 444542 2469999999999999999999999987654
No 128
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.77 E-value=5e-17 Score=184.73 Aligned_cols=295 Identities=16% Similarity=0.203 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCC-----------CCCCEEEEcCCCCCCC----HH
Q 002263 519 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-----------HHRNVCIIPVSAHGTN----PA 583 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~-----------~~~~~Ili~~saHg~~----~~ 583 (946)
.+.+.++++.+++++|.+.+ +.++++++|...+++++. .+|+ ..+++||+|......+ ..
T Consensus 44 ~~~~~~~~~~~a~~~g~~~~-~~~~g~t~al~~al~al~----~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~ 118 (363)
T TIGR01437 44 KELVNKTGEYIANLLGVEDA-VIVSSASAGIAQSVAAVI----TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVET 118 (363)
T ss_pred HHHHHHHHHHHHHhhCCCeE-EEEcCHHHHHHHHHHHHh----cCCCcchhhcccccccccceEEEECccchhcCCchHH
Confidence 35678899999999998765 566677777655555432 3332 1345888877322222 34
Q ss_pred HHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEE-EeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccc
Q 002263 584 TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM-VTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 584 ~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vv-vt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~ 661 (946)
.+.+.|++++.++. ++.+|+++++++|+ ++|++++ +++| |++|.+. |+++|+++||++|+++++|+++..
T Consensus 119 ~~~~~g~~~v~v~~--~~~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~-~~~~i~~~a~~~gi~vivD~a~~~-- 190 (363)
T TIGR01437 119 MVRLGGGKVVEAGY--ANECSAEQLEAAIT---EKTAAILYIKSHHCVQKSML-SVEDAAQVAQEHNLPLIVDAAAEE-- 190 (363)
T ss_pred HHHhcCCeEEEEcC--CCCCCHHHHHHhcC---hhceEEEEEecCCCCcCCcC-CHHHHHHHHHHcCCeEEEECCCCC--
Confidence 56789999999986 46799999999997 7888776 5554 6788777 799999999999999999998741
Q ss_pred ccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 662 VGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 662 ~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
.+..+..+|+|++++|+||+| +||..|+++.++++.+.+.....+. + +..+..+. + ...+
T Consensus 191 -~~~~~~~~g~D~~~~S~~K~l------~gp~~G~l~~~~~~i~~~~~~~~~~----~-~~~~~~~~-------~-~~gl 250 (363)
T TIGR01437 191 -DLQKYYRLGADLVIYSGAKAI------EGPTSGLVLGKKKYIEWVKLQSKGI----G-RAMKVGKE-------N-ILGL 250 (363)
T ss_pred -chHHHHHcCCCEEEEeCCccc------CCCceEEEEEcHHHHHHHHhccCCC----c-ceeccCHH-------H-HHHH
Confidence 122234578999999999988 3566788888766554432110000 0 00000000 0 1112
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeec-cCCCcee--eeEEEecccccccCCCCHHHHHHHHH
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFR-GVNGTVA--HEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~-~~~~~~~--~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
..+..++...+.+-+. ....++.++.++|+++ +.+... +..+... ..+.++.. ..+++..++.++|.
T Consensus 251 ~aAl~~~~~~~~~~~~----~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~----~~g~~~~~l~~~L~ 322 (363)
T TIGR01437 251 TAALEQYLSTGKESGA----EMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDES----ELGMTAADVVQALR 322 (363)
T ss_pred HHHHHHHHccCcccHH----HHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEecc----CCCCCHHHHHHHHh
Confidence 2233344333433222 2334567899999875 333211 1111111 12233332 13678999999999
Q ss_pred HCC--cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 817 DYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 817 ~~G--i~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
++| |.+... +...+.+++.+.. .+.+|+|+++++|+++
T Consensus 323 ~~~~~I~~r~~-~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 323 QGEPAIYTRGY-KANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred cCCCCEEEeee-eecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 877 555432 2235789999875 5699999999999876
No 129
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.77 E-value=3.9e-17 Score=185.21 Aligned_cols=301 Identities=17% Similarity=0.107 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~- 599 (946)
...++++.+++++|.+.+ +..++|+++...++.+++ ..++++|+++...|.++...+...|++++.+++++
T Consensus 19 ~~~~~~~~la~~~~~~~~-~~~~sgt~al~~~l~~l~-------~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVKYA-VAVSSGTAALHLALRALG-------IGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHcC-------CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCC
Confidence 466889999999998754 345577766544433321 12568999999988888778889999999999987
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccC-CCccCCCEEEeC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 678 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~-pg~~GaDi~~~s 678 (946)
++.+|+++++++++ +++++|+++++ +|... |+++|.++|+++|+++++|+++..+...... .+.+ .|+.++|
T Consensus 91 ~~~~d~~~l~~~i~---~~~~~v~~~~~--~G~~~-~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~-~d~~~~S 163 (352)
T cd00616 91 TYNIDPELIEAAIT---PRTKAIIPVHL--YGNPA-DMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTF-GDAGAFS 163 (352)
T ss_pred cCCcCHHHHHHhcC---cCCeEEEEECC--CCCcC-CHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccC-cceeEEc
Confidence 68899999999996 78999998864 68887 7999999999999999999987533221111 1222 5888888
Q ss_pred CC--cccccCCCCCCCcceeEEEec-ccCCCCCCC-ccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 679 LH--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 679 ~h--K~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~-~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+| |+|+ ++.+|++++++ ++.+.+... ..+...+. ......+.+... ..+...++. .....+
T Consensus 164 ~~~~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~aa~-----~~~~l~ 228 (352)
T cd00616 164 FHPTKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRDR--FKYEHEILGYNY--RLSEIQAAI-----GLAQLE 228 (352)
T ss_pred CCCCCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCCC--Cccccceeeecc--CcCHHHHHH-----HHHHHH
Confidence 66 8873 22346666653 444332100 00000000 000000111100 001111111 112234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC--
Q 002263 755 GLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 829 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~-~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~-- 829 (946)
++.+..++...+++++.+.|++. +++....+. ....+.+.+.+.. ..+.+..++.+.|.++||.++....|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gI~~~~~~~~~~~ 305 (352)
T cd00616 229 KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDP---EAGESRDELIEALKEAGIETRVHYPPLHH 305 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECC---cCCCCHHHHHHHHHHCCCCeeeecCcccc
Confidence 55666667778999999999874 443322111 1222334444431 014678999999999999764322121
Q ss_pred ----------------------CCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 830 ----------------------PGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 830 ----------------------~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
.+.+|+++...+|++||++++++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 306 QPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 130
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.77 E-value=4.3e-17 Score=182.90 Aligned_cols=340 Identities=17% Similarity=0.205 Sum_probs=228.4
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC---CCcccccCCchHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~a~r 557 (946)
..|++...++.++..+.... .| ++++.- .+ +--.+|.++|+++++ ++.+ ++.+|||.++++++..++
T Consensus 57 ~~Gh~~~~i~~Ai~~Q~~~l-~~--~~~~~~----t~--~Pa~~LA~~L~~~aP~~~l~~v-Ff~~sGSeAvEtAlKma~ 126 (449)
T COG0161 57 NHGHGRPEIAEAIKKQLDKL-PH--VMFGGF----TH--EPAIELAEKLAELAPEGGLDHV-FFTDSGSEAVETALKMAL 126 (449)
T ss_pred hcCcCCHHHHHHHHHHHHhC-Cc--hhhccc----CC--chHHHHHHHHHHhCCCCCccEE-EEeCCchHHHHHHHHHHH
Confidence 45888888888888875332 22 222211 11 113488999999997 5544 678899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCC------CCC------CCHHHHHHH
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDA------KGN------INIEELRKA 611 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~------~g~------~D~e~L~~~ 611 (946)
.|++.+|+++|.++| ...++||....+++..|+ .+..+|... ++. -+.++|+++
T Consensus 127 qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~ 206 (449)
T COG0161 127 QYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEAL 206 (449)
T ss_pred HHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHH
Confidence 999999987777777 568899998887666553 233444322 111 337889999
Q ss_pred HHhcC-CCeEEEEEeCC--Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEe
Q 002263 612 AEANR-DNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHL 677 (946)
Q Consensus 612 i~~~~-~~t~~vvvt~P--n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~ 677 (946)
|.+++ ++++++++..- ...|++.+ .++++.+||++||+++|+|.+ ..||.+.|.+ | +|++++
T Consensus 207 i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV----~tGFGRTG~~FA~e~~gi~PDi~~~ 282 (449)
T COG0161 207 ILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV----ATGFGRTGKMFACEHAGIVPDILCL 282 (449)
T ss_pred HHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc----eeCCCcCchhhhhhhcCCCCCeeee
Confidence 99888 45555555432 23677753 499999999999999999985 7889888864 3 699987
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
.|.++ +|--.+|.+.+++++.+.+-....+ .-.-+.. +.|+.+.+++|.+.|..+-++++.
T Consensus 283 --aKGLT----~GY~Pl~a~l~~~~I~~~~~~~~~~----------~f~HG~T---YsghPlacAaAla~L~i~e~e~l~ 343 (449)
T COG0161 283 --AKGLT----GGYLPLSAVLTSDRIYEAFSDGDAG----------AFMHGHT---YSGNPLACAAALANLDILEEEDLL 343 (449)
T ss_pred --ccccc----ccchhhHhHhhhHHHHHHHhcccCC----------eeccCCc---cccCHHHHHHHHHHHHHHHhcCHH
Confidence 48874 3444667777777665543211000 0000111 336788888999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CC--ee--eccCCCce-eeeEEEecccccccC-CCCHHHHHHHHHHCCcccCCCCCCCC
Q 002263 758 EASKIAILNANYMAKRLEKH-YP--IL--FRGVNGTV-AHEFIVDLRGLKNTA-GIEPEDVAKRLMDYGFHGPTMSWPVP 830 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~-~~--v~--~~~~~~~~-~~e~v~~~~~~~~~~-g~~~~~i~~~L~~~Gi~~~~~~~p~~ 830 (946)
+.++ ....||.++|++. .. .+ ..+ .|.. .-|++-|..+ +... ..-...+.+++.++|+.++.+ +
T Consensus 344 ~~~~---~~~~~l~~~L~~~l~~~p~VgdVR~-~Gli~~iElv~d~~t-~~~f~~~~~~~~~~~~~e~Gl~iRp~----g 414 (449)
T COG0161 344 ERVA---EIGAYLQAGLQAALADHPLVGDVRG-LGLIGAIELVADKAT-KTPFEARVGARVRAAALERGLLIRPL----G 414 (449)
T ss_pred HHHH---HHHHHHHHHHHHhcccCCcEEEeec-cceEEEEEEeccccc-ccchhhhHHHHHHHHHHHCCeEEeec----C
Confidence 6554 6778999999862 21 11 111 1221 1233333210 0000 011567888899999998744 5
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 831 GTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 831 ~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.+.++|+...|++|||++++.+++++++..+
T Consensus 415 ~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 415 DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999987654
No 131
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.77 E-value=6.5e-17 Score=182.54 Aligned_cols=296 Identities=18% Similarity=0.179 Sum_probs=193.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--c-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+++++....|.. . ..+..++|+++..+++. .+. .++++|+++...|+++...++..|++
T Consensus 35 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~---~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~~ 106 (350)
T cd00609 35 DPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLR---ALL-----NPGDEVLVPDPTYPGYEAAARLAGAE 106 (350)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHH---HhC-----CCCCEEEEcCCCchhHHHHHHHCCCE
Confidence 3566666666777776665532 2 23445555555533333 221 24688999999999999999999999
Q ss_pred EEEEcCCCCCCCCH--HHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccccccc-cc-
Q 002263 592 IVSVGTDAKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV-GL- 664 (946)
Q Consensus 592 vv~v~~~~~g~~D~--e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl- 664 (946)
++.++.++++..+. ++++.+++ +++++|++++|+ .+|.+.+ ++++|.++||++|+++++|+|+..... +.
T Consensus 107 ~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~ 183 (350)
T cd00609 107 VVPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEP 183 (350)
T ss_pred EEEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcc
Confidence 99999988877665 66666654 789999999985 6899872 355556899999999999998742211 11
Q ss_pred ----cCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 665 ----TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 665 ----~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
..+...+.|+++.++||+|+ .+|+++|++.+++ .+.+.+.... + ..+.+.+ ..
T Consensus 184 ~~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~~~~~~~~~~~-----------~-~~~~~~~------~~ 241 (350)
T cd00609 184 PPALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPEELLERLKKLL-----------P-YTTSGPS------TL 241 (350)
T ss_pred cccccCcCccCcEEEEeecccccC----CcccceEEEecCHHHHHHHHHHHH-----------H-hcccCCC------hH
Confidence 12345678999999999985 2567899999988 6665543110 0 0001111 11
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
...++...+.... +++++..++...+++++.+.|++. ....... .. .+.+.+.+.. +.+...+.+.|.++
T Consensus 242 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~--g~~~~~~~~~-----~~~~~~~~~~l~~~ 312 (350)
T cd00609 242 SQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKP-SG--GFFLWLDLPE-----GDDEEFLERLLLEA 312 (350)
T ss_pred HHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-Cc--cEEEEEecCC-----CChHHHHHHHHHhC
Confidence 1222333333322 567777788889999999999886 2221111 11 1223445431 22456777888888
Q ss_pred CcccCCCC-CC--CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 819 GFHGPTMS-WP--VPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 819 Gi~~~~~~-~p--~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
|+.+.... |. .+.++||++... ++|+++++++|+
T Consensus 313 gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 313 GVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred CEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 99875432 22 357899999876 999999999986
No 132
>PRK07179 hypothetical protein; Provisional
Probab=99.76 E-value=8.2e-17 Score=186.40 Aligned_cols=287 Identities=17% Similarity=0.207 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
...++++.+++++|.+.+ +..++|+.++.+++.++. .+++.|+++...|.+....+...|.+++.++.
T Consensus 100 ~~~~le~~la~~~g~~~~-~~~~sG~~An~~~l~~l~--------~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~--- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFESC-LLCQSGWAANVGLLQTIA--------DPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH--- 167 (407)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEECCcCHHHHHHHHHCCCeEEEecC---
Confidence 455778899999999765 567788877654444332 13577888888887776667788988876654
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccC---CCcc----CC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS---PGYI----GA 672 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~---pg~~----Ga 672 (946)
.|+++|++++++ .++++|++.+| |.+|.+. |+++|.++|+++|+++++|+++..+..|... ...+ ++
T Consensus 168 --~d~~~l~~~l~~--~~~~lV~v~~v~n~tG~i~-pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~v 242 (407)
T PRK07179 168 --NDVDHLRRQIER--HGPGIIVVDSVYSTTGTIA-PLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRV 242 (407)
T ss_pred --CCHHHHHHHHHh--cCCeEEEECCCCCCCCccc-cHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCC
Confidence 599999999972 24778888887 4789998 7999999999999999999997532211110 0112 46
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
|+++.++||+|+ +++|++++++++.+.++... ... ..++++. .. .++++.+.+..+.
T Consensus 243 di~~~S~sK~~g-------~~~G~l~~~~~~~~~~~~~~-----------~~~---~~~~t~~-~~-~~aa~~aal~~~~ 299 (407)
T PRK07179 243 HFITASLAKAFA-------GRAGIITCPRELAEYVPFVS-----------YPA---IFSSTLL-PH-EIAGLEATLEVIE 299 (407)
T ss_pred CEEEeechHhhh-------ccCeEEEeCHHHHHHHHHhC-----------cCe---eeCCCCC-HH-HHHHHHHHHHHHh
Confidence 999999999984 24788988877655442100 000 0011111 11 1122223344442
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC---
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--- 828 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p--- 828 (946)
.. .+..++...+++++.++|+++ +++. + .+.+ +.+.+.. ..+...+.+.|.++||.+.....|
T Consensus 300 ~~--~~~~~~l~~~~~~l~~~L~~~g~~v~--~-~~~i---~~l~~~~-----~~~~~~~~~~L~~~GI~~~~~~~p~~~ 366 (407)
T PRK07179 300 SA--DDRRARLHANARFLREGLSELGYNIR--S-ESQI---IALETGS-----ERNTEVLRDALEERNVFGAVFCAPATP 366 (407)
T ss_pred cC--HHHHHHHHHHHHHHHHHHHHcCCCCC--C-CCCE---EEEEeCC-----HHHHHHHHHHHHHCCceEeeecCCCCC
Confidence 21 334566778889999999875 4443 2 1222 2333321 124567888999999975432223
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 829 -VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 829 -~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..+.+||+++..+|++|+|+++++|++++++.
T Consensus 367 ~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 367 KNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 14789999999999999999999999887763
No 133
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.76 E-value=2.2e-16 Score=164.09 Aligned_cols=325 Identities=15% Similarity=0.154 Sum_probs=219.8
Q ss_pred eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCC-cceEEcccHHHHHHHHHHH
Q 002263 57 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMC 135 (946)
Q Consensus 57 ~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~-~~~sl~~~~Ta~~ea~~la 135 (946)
-.+|.| |..+|..|++++-.+.. +-..||..| ++.+..+-+-..+.... ....+-.+|+.++|+++..
T Consensus 19 ~L~gPG--Psnl~~~V~~A~~~~~l-----gh~sPe~~q----Im~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862|consen 19 TLLGPG--PSNLSGRVQEAMSRPSL-----GHMSPEFVQ----IMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred eeecCC--CcCCCHHHHHhhcCCcc-----ccCCHHHHH----HHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHh
Confidence 367888 56699999866543332 334566544 34444444444444432 2244557789999988664
Q ss_pred hccccCCCCEEEE-cCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-c-CCCEeEEEEEcC-CCceeecc-
Q 002263 136 NNIQKGKKKTFII-ASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-K-SGDVCGVLVQYP-GTEGEVLD- 202 (946)
Q Consensus 136 ~~~~~~~gd~vvv-~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i-~~~t~~v~v~~p-n~~G~i~d- 202 (946)
+ +. +||+|++ ....+.+...-+ +++.|++|.+++. +++.+ + ..+.++|+|++. +.+|+++|
T Consensus 88 ~-le--Pgd~vLv~~~G~wg~ra~D~---~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~ 161 (385)
T KOG2862|consen 88 L-LE--PGDNVLVVSTGTWGQRAADC---ARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL 161 (385)
T ss_pred h-cC--CCCeEEEEEechHHHHHHHH---HHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchH
Confidence 4 23 8999885 446665544333 4467888887643 44544 4 346788988887 67999999
Q ss_pred hHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEee
Q 002263 203 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 280 (946)
Q Consensus 203 i~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~ 280 (946)
++.+.++||+++++++|++ ..|+|... .-.+||+|++...+ |.++.| ||++++..+++.++++..|--+
T Consensus 162 ~~~~g~lc~k~~~lllVD~-VaSlggt~F~mDewgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~--- 232 (385)
T KOG2862|consen 162 LAISGELCHKHEALLLVDT-VASLGGTEFEMDEWGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTK--- 232 (385)
T ss_pred HHHHHHHhhcCCeEEEEec-hhhcCCccceehhhcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCC---
Confidence 7888899999999999954 45777653 34799999998888 788777 5688999999888777433211
Q ss_pred cCCCCcceEEeccccccc------ccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 002263 281 DSSGKPALRVAMQTREQH------IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 354 (946)
Q Consensus 281 d~~g~~~~~l~l~tre~~------irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~ 354 (946)
.-.|+++...+-+. .|+...|..+ |.++++.+|+ +.+-++|++++.+|+.+++++|+..|+++|
T Consensus 233 ----~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv---~lly~Lr~AL--~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G- 302 (385)
T KOG2862|consen 233 ----PVSFYFDILRLGNFWGCDGEPRAYHHTPPV---QLLYSLRAAL--ALIAEEGLENSWRRHREMSKWLKLSLEALG- 302 (385)
T ss_pred ----ceEEEEeHHhhcchhccCCcccccccCCcH---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 11244432211111 1445566666 8899999997 778899999999999999999999999998
Q ss_pred EEEcC---CCCcCeEE-EecCC---HHHHHHHHHHc-CCeee----eecCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 002263 355 VEVQG---LPFFDTVK-VKCAD---AHAIASAAYKI-EMNLR----VVDSNTVTASFDE-TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 355 ~~~~~---~~~~~~~~-i~~~~---~~~v~~~L~~~-GI~~~----~~~~~~lris~~~-~~t~edid~ll~~l~~ 417 (946)
+++.. +...++++ +.++- ..+|+.++..+ ++.+. ...+..+||.+.- .-+.+-|+..++.|+.
T Consensus 303 Lq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~ 378 (385)
T KOG2862|consen 303 LQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKL 378 (385)
T ss_pred ccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHH
Confidence 88753 23333332 33332 67888888776 66553 2345678888665 4467888888888764
No 134
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.76 E-value=1.4e-16 Score=183.87 Aligned_cols=326 Identities=17% Similarity=0.213 Sum_probs=215.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCccee----ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKVYKS----FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 103 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~~~~----~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e 103 (946)
.+| +.++++.+++.++..+..++..+.. +...+..+..+|+...+.+.. +..-+...+..+.++.+.-.+
T Consensus 32 ~~p--~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~----~~~~nl~d~~~~p~a~~~E~~ 105 (460)
T COG0076 32 MAP--EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVS----ALNKNLGDPDESPAAAELEER 105 (460)
T ss_pred cCC--ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHH----HHhhcCCCcccChhHHHHHHH
Confidence 455 6899999999999999777754321 223333345577776544442 222244555667788888888
Q ss_pred HHHHHHHHhCC-CCcceEEcccHHHHHHHHHHHhccc-c---C-------CCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 104 FQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNIQ-K---G-------KKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 104 ~q~~la~L~g~-~~~~~sl~~~~Ta~~ea~~la~~~~-~---~-------~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
.-.|+++|+|+ +.....++.|||.++.-.+++.+.. + . ...+||+|...|.|+.+.++.+ |++.
T Consensus 106 ~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~l----G~~~ 181 (460)
T COG0076 106 VVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL----GLGL 181 (460)
T ss_pred HHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHh----CCCc
Confidence 99999999999 4556778899996555333333311 0 0 1237999999999999987643 4444
Q ss_pred EEe---------ccccccc-cCCCEeE--EEEEcCC-CceeecchHHHHHHHHhCCcEEEEEecCccccC--CCCCCCc-
Q 002263 172 VVS---------DLKDIDY-KSGDVCG--VLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTI--LKPPGEL- 235 (946)
Q Consensus 172 ~~~---------~~~~l~~-i~~~t~~--v~v~~pn-~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~--l~~~~~~- 235 (946)
+.+ |+++|++ ++++|.. |+.+.++ .+|.++||++|+++|+++|++++|++..-++.. ....+.|
T Consensus 182 ~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~ 261 (460)
T COG0076 182 RRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWD 261 (460)
T ss_pred eeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhh
Confidence 443 2346666 7777776 7777774 699999999999999999999999653221111 1222333
Q ss_pred ----cceEEEecc-ccccccCCCCCCceEEEEEchh--hhhcCC--CceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 236 ----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 236 ----GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~--~~~~lp--~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
+||-++.++ |++..|. ++|++.+|++ +.+.+- ..+.+.+ +.+.+.+.. +|
T Consensus 262 f~l~~vdSIt~d~HK~g~aP~-----~~G~il~rd~e~l~~~~~~~~~yl~~~----~~~~~ti~~-sr----------- 320 (460)
T COG0076 262 FGLEGVDSITVDGHKYGLAPI-----GCGVVLFRDEEALRRILIFADYYLPGG----GIPNFTILG-SR----------- 320 (460)
T ss_pred cCCCCceEEEECcccccCCCC-----CceEEEEECHHHhhhhhhcccccCCCC----CcCceeEee-cc-----------
Confidence 799999999 4455565 4667777765 433321 1111100 112222221 11
Q ss_pred CccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC----HHHHHHHHHH
Q 002263 307 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAYK 382 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~----~~~v~~~L~~ 382 (946)
. .....+..+. +.++|.+|++++.+++.+++++|+++|++.|.+++++++..+.|+|+.++ ..+..+++.+
T Consensus 321 ~---~~~~~~~~~~--l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~~ 395 (460)
T COG0076 321 P---GRQALALYAN--LRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLDR 395 (460)
T ss_pred c---hHHHHHHHHH--HHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHHh
Confidence 0 0111122222 48999999999999999999999999999976999988888899998754 3466677777
Q ss_pred cCCeeee
Q 002263 383 IEMNLRV 389 (946)
Q Consensus 383 ~GI~~~~ 389 (946)
.|+.+..
T Consensus 396 ~gw~v~~ 402 (460)
T COG0076 396 RGWQVPA 402 (460)
T ss_pred cCceeec
Confidence 8998864
No 135
>PRK15029 arginine decarboxylase; Provisional
Probab=99.76 E-value=4.3e-17 Score=195.89 Aligned_cols=278 Identities=13% Similarity=0.054 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 176 (946)
..|.++|+.+|+++|++.+.+ +++|+|+++.+++++.. . +||+|+|++++|.|+...+. -.|++.+++++
T Consensus 205 G~I~eAq~~aA~~fgA~~t~F-lvNGST~gn~a~i~a~~-~--~gd~Vlv~RN~HKSv~~al~----L~ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWS-VVVGTSGSNRTIMQACM-T--DNDVVVVDRNCHKSIEQGLI----LTGAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEE-EeCChhHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHH----HcCCeEEEecccc
Confidence 578899999999999987544 78899999999888764 3 89999999999999998764 25788888753
Q ss_pred ----------------ccccc-c--CCCEe--------EEEEEcCCCceeecchHHHHHHHHhCCcEEEEE----ecCcc
Q 002263 177 ----------------KDIDY-K--SGDVC--------GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLA 225 (946)
Q Consensus 177 ----------------~~l~~-i--~~~t~--------~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~----a~~~a 225 (946)
+.+++ + .++++ +|++|+|||+|.+.|+++|+++||++|++++|+ +++.-
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 23333 2 23444 899999999999999999999999999999993 33211
Q ss_pred ccCCC--CCC-----C-ccce-EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccc
Q 002263 226 LTILK--PPG-----E-LGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 295 (946)
Q Consensus 226 l~~l~--~~~-----~-~GaD-i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tr 295 (946)
...++ .+- . .||| +++.|. |.++.- + ++++|+++.. .+.+ |.
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~al-T----QaS~LHv~~~-~~~i---------d~------------- 408 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNAL-S----QASYIHVREG-RGAI---------NF------------- 408 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccch-h----hhhhheeCCC-cccc---------CH-------------
Confidence 11122 111 3 7999 889999 666542 2 4678887643 1111 10
Q ss_pred cccccccccCCCccchHHHHHHHHHHH-HH-HhCh-hhHHHHHHHHHHHHHHHHHHHhcCCC------------------
Q 002263 296 EQHIRRDKATSNICTAQALLANMAAMY-AV-YHGP-EGLKTIAQRVHGLAGTFALGLKKLGT------------------ 354 (946)
Q Consensus 296 e~~irre~aTsni~t~~~l~a~~aa~y-~~-~~g~-~Gl~~i~~~~~~~a~~l~~~L~~~g~------------------ 354 (946)
.|...+-.-..|+++.|.+|||+- +. ++.. .| +++.++..+.+..+++.|.++.+
T Consensus 409 ---~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v 484 (755)
T PRK15029 409 ---SRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVV 484 (755)
T ss_pred ---HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCcccc
Confidence 011111122346688899999982 22 2322 34 44566677788889998877642
Q ss_pred ------------------------EEEcCC--C------------CcCe--EEEecCC----HH---------HHHHHHH
Q 002263 355 ------------------------VEVQGL--P------------FFDT--VKVKCAD----AH---------AIASAAY 381 (946)
Q Consensus 355 ------------------------~~~~~~--~------------~~~~--~~i~~~~----~~---------~v~~~L~ 381 (946)
+.++.+ . .+|. ++|.+++ .. .+.+.|.
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~ 564 (755)
T PRK15029 485 TDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG 564 (755)
T ss_pred ccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHH
Confidence 222211 0 1243 5555432 33 8999998
Q ss_pred HcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 382 KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 382 ~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++||.++..+...+.+.++..+|++++++|+++|.
T Consensus 565 ~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~ 599 (755)
T PRK15029 565 RHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLC 599 (755)
T ss_pred HcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 89999999888999999999999999999999996
No 136
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.76 E-value=1.7e-16 Score=180.28 Aligned_cols=269 Identities=13% Similarity=0.148 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCC-CCEEEEcCCCCCCCHHH---HHHcCCEEE
Q 002263 519 QEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHH-RNVCIIPVSAHGTNPAT---AAMCGMKIV 593 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~-~~~Ili~~saHg~~~~~---a~~~G~~vv 593 (946)
.+.+.++++++++++|.+... +.+++++++...++.++.. .+..+ ++.|+++...|+++... ++..|++++
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~----~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~ 116 (353)
T TIGR03235 41 KKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLAR----AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVT 116 (353)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHH----hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEE
Confidence 356788999999999997543 3444445555444443322 12112 36788888888887665 445799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 672 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga 672 (946)
.++.++++.+|+++|+++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++..+...+ ...++++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~~ivD~a~~~g~~~~-~~~~~~~ 191 (353)
T TIGR03235 117 YLPVDESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQ-PIREIAEVLEAHEAFFHVDAAQVVGKITV-DLSADRI 191 (353)
T ss_pred EEccCCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceecc-CHHHHHHHHHHcCCEEEEEchhhcCCccc-cccccCC
Confidence 99998889999999999996 68899999998 4689998 79999999999999999999875333222 2345789
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCC--CCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF--LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~--lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
|++++++||+++ | +|+|+++++++.... +.....+. .. .++.+.++.++.. . ....+.+..
T Consensus 192 D~~~~s~~K~~g-p-----~g~g~l~~~~~~~~~~~~~~~~~~~--~~-~~~~~~gt~~~~~-----~---~al~~al~~ 254 (353)
T TIGR03235 192 DLISCSGHKIYG-P-----KGIGALVIRKRGKPKAPLKPIMFGG--GQ-ERGLRPGTLPVHL-----I---VGMGEAAEI 254 (353)
T ss_pred CEEEeehhhcCC-C-----CceEEEEEccCcccccccCceeeCC--CC-cCccccCCCChHH-----H---HHHHHHHHH
Confidence 999999999863 2 478999999875322 21111111 00 0111122223221 1 111222333
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
+ .+|+.+..++...+++++.++|++. +++. ..+.......+.|.++ +.+.+++.++|.+ ||.+
T Consensus 255 ~-~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~-~~~~~~~~~i~~~~~~------~~~~~~v~~~L~~-~i~v 318 (353)
T TIGR03235 255 A-RRNAQAWEVKLRAMRNQLRDALQTLGVKLN-GDPAETIPHILNFSID------GVNSEALIVNLRA-DAAV 318 (353)
T ss_pred H-HhhHHHHHHHHHHHHHHHHHHhccCCeEEe-CCcccccCCEEEEEeC------CcCHHHHHHHHhC-CeEE
Confidence 3 3567777788888999999999763 3332 1111112222333332 5678899999975 7664
No 137
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.76 E-value=4e-16 Score=176.30 Aligned_cols=327 Identities=20% Similarity=0.259 Sum_probs=221.0
Q ss_pred cccceeeecCCCcccccccccCccccc----cCCCCcccccccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHH
Q 002263 479 MIPLGSCTMKLNATTEMMPVTWPSFAN----IHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAG 552 (946)
Q Consensus 479 ~~~lGs~~~~~~~~~~~~~~~~~~f~~----~~p~~p~e~~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~ 552 (946)
...+|++++++..++..+... +.. +.+| +...++.+.|.+++..+ ...++.++||.+++++
T Consensus 67 v~~~GH~hP~Vv~Av~~q~~~---~~h~~~~~~~~----------e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~A 133 (447)
T COG0160 67 VLNLGHNHPRVVEAVKRQLAK---LNHTHTRDLYY----------EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAA 133 (447)
T ss_pred hhccCCCCHHHHHHHHHHHHH---hhcccCCcccc----------hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHH
Confidence 345788888777777776422 221 1121 23456778888887653 2357788999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCCC------------CCCHH
Q 002263 553 LMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKG------------NINIE 606 (946)
Q Consensus 553 l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~g------------~~D~e 606 (946)
+...|.|. +|..|| ...+.||....+.++.|- .|..+|..... .-..+
T Consensus 134 iKiAr~~T------gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~ 207 (447)
T COG0160 134 IKIARAYT------GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALE 207 (447)
T ss_pred HHHHHHHh------CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHH
Confidence 99888863 344555 678889988887654332 37777764321 11244
Q ss_pred HHHHHHHhc---CCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--
Q 002263 607 ELRKAAEAN---RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G-- 671 (946)
Q Consensus 607 ~L~~~i~~~---~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G-- 671 (946)
.++..+... ..+++++++..- +..|++.+ .++++.++|++||+++|+|.+ |.|+.+.|.| |
T Consensus 208 ~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEV----QtG~GRTG~~fa~E~~gv~ 283 (447)
T COG0160 208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEV----QTGFGRTGKMFAFEHFGVE 283 (447)
T ss_pred HHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCccccchhhhhcCCC
Confidence 456655432 246888888754 56787764 489999999999999999986 6788888864 4
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
+||++++ |.++ ||-.+|.+..++++....|+... + | +.|+...++++.+.|..+
T Consensus 284 PDivt~a--K~ig-----~G~Pl~avv~r~ei~~~~~g~~~----------------~--T-f~GNpva~Aaa~AvL~vi 337 (447)
T COG0160 284 PDIVTLA--KSLG-----GGLPLSAVVGRAEIMDWPPGGHG----------------G--T-FGGNPVACAAALAVLDVI 337 (447)
T ss_pred CCEEEec--cccc-----CCCceeEEeccHHhcccCCcccC----------------C--C-CCcCHHHHHHHHHHHHHH
Confidence 7999884 8773 46678888888888775454321 1 1 335677788888999988
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCce-eeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTV-AHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~-~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
-+++|.+.+ ....+||+++|.++ +... ..|. |.. .-|++-|-.+ +.........|.+++.++|+...+.
T Consensus 338 e~e~L~~~a---~~~G~~l~~~L~~l~~~~~~IgdVRG~-Glm~giE~v~d~~t-~~p~~~~~~~i~~~~~~~Glil~~~ 412 (447)
T COG0160 338 EEENLLERA---AELGEYLRDRLEELQEKHPLIGDVRGL-GLMIGVELVKDRDT-KEPDAELAAKIVARAFERGLLLLTC 412 (447)
T ss_pred HHccHHHHH---HHHHHHHHHHHHHHHhhcCceeccccc-ceEEEEEEecCCCC-CCCCHHHHHHHHHHHHHcCCEEecc
Confidence 888776554 46788999999764 4432 1221 322 2344333111 1111123568999999999886554
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 826 SWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 826 ~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+ +..++|||.|+...|++++|++++.|.++++++
T Consensus 413 G-~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 413 G-PHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred C-CCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 4 235899999999999999999999999988764
No 138
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.76 E-value=1.3e-16 Score=180.54 Aligned_cols=277 Identities=17% Similarity=0.177 Sum_probs=187.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 94 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 94 sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
..|......++++.+++++|++. ..++.+||+++.+++.++. . +||+|++++..|+++...++ ..|++++.
T Consensus 41 ~~~~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~~~~~-~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~ 111 (349)
T cd06454 41 ISGTSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVLSTLA-G--KGDLIISDSLNHASIIDGIR----LSGAKKRI 111 (349)
T ss_pred ecCCchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHHHHhc-C--CCCEEEEehhhhHHHHHHHH----HcCCceEE
Confidence 34556667788899999999864 5667778877776555442 3 89999999999999887754 35777776
Q ss_pred ec---cccccc-cC-----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC---------CCCC
Q 002263 174 SD---LKDIDY-KS-----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---------PPGE 234 (946)
Q Consensus 174 ~~---~~~l~~-i~-----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~---------~~~~ 234 (946)
++ .+++++ +. +++++|++.++ |.+|.+.|+++|+++||++|+++++|. ..+.+.+. ....
T Consensus 112 ~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~-a~~~g~~~~~~~~~~~~~~~~ 190 (349)
T cd06454 112 FKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDE-AHSVGVYGPHGRGVEEFGGLT 190 (349)
T ss_pred ecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEc-cccccccCCCCCChhhhcccc
Confidence 53 355555 43 35677777777 679999999999999999999999942 33333221 1245
Q ss_pred ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH
Q 002263 235 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 313 (946)
Q Consensus 235 ~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~ 313 (946)
.++|++++|. |.|+. |+ |+++.++++.+.+.... ..+. ..++.| ...
T Consensus 191 ~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~----------~~~~------------~~~~~~---~~~ 238 (349)
T cd06454 191 DDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYA----------RGFI------------FSTSLP---PAV 238 (349)
T ss_pred ccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhc----------hhhh------------ccCCCC---HHH
Confidence 6899999998 77753 23 67877777665441100 0010 011111 122
Q ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC-C--HHHHHHHHHHcCCeeeee
Q 002263 314 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-D--AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 314 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-~--~~~v~~~L~~~GI~~~~~ 390 (946)
..++.+++ .++.. .+++.++..++.+++.+.|+++| +++...+....+.+..+ . +.++.+.|.++||.++..
T Consensus 239 ~~a~~~~l--~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~ 313 (349)
T cd06454 239 AAAALAAL--EVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAI 313 (349)
T ss_pred HHHHHHHH--HHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEe
Confidence 33444443 33322 45678888999999999999887 77664322212233233 2 688999999999988642
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+|++++.+++++|+++++++|+.
T Consensus 314 ~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 347 (349)
T cd06454 314 RYPTVPRGTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred cCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999863
No 139
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.76 E-value=1.4e-16 Score=181.99 Aligned_cols=291 Identities=14% Similarity=0.156 Sum_probs=183.4
Q ss_pred cccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 513 DQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 513 e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
....|..+.+.++++.+++++|.+.+ +..++|+.++.+. +..+ . ++++.|++....|++.-..+.......
T Consensus 49 ~~~~g~~~~~~~~e~~la~~~~~~~~-l~~~sG~~a~~~~---~~~~--~---~~~d~ii~d~~~H~sv~~~~~~~~~~~ 119 (370)
T PRK05937 49 RAILGPSSLLDDLEHKIAHFHGAPEA-FIVPSGYMANLGL---CAHL--S---SVTDYVLWDEQVHISVVYSLSVISGWH 119 (370)
T ss_pred CcccCChHHHHHHHHHHHHHhCCCeE-EEECChHHHHHHH---HHHh--C---CCCCEEEEEhhhhHHHHHHHHHcCCce
Confidence 44567778899999999999999765 6677787665322 1111 1 135777777888987777766544333
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcC---CCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~---~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg 668 (946)
+.++ ..|+++|++++++.. +++++|++++++ .+|.+. |+++|+++||++|++++||++|..+..+..-.+
T Consensus 120 ~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~-pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g 193 (370)
T PRK05937 120 QSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLA-PLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKG 193 (370)
T ss_pred EEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccCCCCCc
Confidence 3343 469999999997432 356677788884 689998 799999999999999999999864332221101
Q ss_pred ---ccCC---CEEEeCCCcccccCCCCCCCcceeEEEecccCC---CCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 669 ---YIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP---FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 669 ---~~Ga---Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~---~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
.+|+ |+...+++|.|+ ++|.|+++.++.... ..+... . . ... ++ .
T Consensus 194 ~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~~~~~~~~~~~~~~-----------~--s-~~~--~~---~- 247 (370)
T PRK05937 194 FCHSLGYENFYAVLVTYSKALG------SMGAALLSSSEVKQDLMLNSPPLR-----------Y--S-TGL--PP---H- 247 (370)
T ss_pred hHHhhCCCCCcEEEEechhhhh------cCceEEEcCHHHHHHHHHhCCCCe-----------e--c-CCC--CH---H-
Confidence 2442 355667789773 345666665432111 111100 0 0 011 11 1
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
.+++..+.+..+..+| ....++...+.+++.+.|.... . +.. ..+ .++ +.+..++.+.|.++|
T Consensus 248 ~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~----~---~~~-~~i--~~~------~~~~~~~~~~L~~~g 310 (370)
T PRK05937 248 LLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA----P---GCV-QPI--FLP------GISEQELYSKLVETG 310 (370)
T ss_pred HHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC----C---CCE-EEE--EeC------ChhHHHHHHHHHHCC
Confidence 1222233344444444 2233455566677777665320 0 111 112 222 235678999999999
Q ss_pred cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 820 i~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
|.++...+|..+.+|++++..+|++|||+|+++|.+++++..
T Consensus 311 i~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 311 IRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred eeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 988755566667899999999999999999999999887654
No 140
>PLN02721 threonine aldolase
Probab=99.76 E-value=8.1e-17 Score=182.67 Aligned_cols=292 Identities=14% Similarity=0.141 Sum_probs=184.9
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHHHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~~~G~~vv~v~~~ 598 (946)
..++++.+++++|.+.. +..++|+++.++++.+. . . .++++|++++.+|..... .+...|++++.+|.+
T Consensus 42 ~~~l~~~la~~~~~~~~-~~~~~Gs~a~~~~l~~~---~-~---~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (353)
T PLN02721 42 ALRLEEEMAKIFGKEAA-LFVPSGTMGNLISVLVH---C-D---VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN 113 (353)
T ss_pred HHHHHHHHHHHhCCcee-EEecCccHHHHHHHHHH---c-c---CCCCeEEEcCccceehhcccchhhhcCceeEecCCC
Confidence 46788999999998764 44456666554333322 1 1 146889999988854444 467889999999988
Q ss_pred CCCCCCHHHHHHHHHhcC----CCeEEEEEeCC-C-cccccc--cCHHHHHHHHHHcCCEEEEeccccccc---ccccCC
Q 002263 599 AKGNINIEELRKAAEANR----DNLSTLMVTYP-S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSP 667 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~----~~t~~vvvt~P-n-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~---~gl~~p 667 (946)
+++.+|+++++++++++. +++++|+++++ | ++|.+. +++++|.++|+++|+++++|+++.... .+. .+
T Consensus 114 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PV 192 (353)
T ss_pred cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CH
Confidence 889999999999997421 47889999775 3 467764 238999999999999999999864211 111 22
Q ss_pred C--ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 668 G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 668 g--~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
. ..++|.++.++||+|+ +|..+++..++++...+... .. ...+... +.+ ..++.++
T Consensus 193 ~~~~~~~d~~~~s~sK~l~------~~~G~~~~~~~~~~~~~~~~--~~----------~~~~~~~--~~~--~~~~~~~ 250 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLG------APVGSVIVGSKSFIRKAKRL--RK----------TLGGGMR--QVG--VLAAAAL 250 (353)
T ss_pred HHHhhhCCEEEEecccccC------CceeeEEecCHHHHHhHHHH--HH----------hcCCCee--hhH--HHHHHHH
Confidence 2 2378999999999985 34334455565554432110 00 0000010 111 1111122
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v--~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
..+.. -+. ..++...+++++.+.|+++..+ ....+ ..+-+.++++. ..+.+..+++++|.++||.+.
T Consensus 251 ~~l~~----~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~L~~~gi~v~ 319 (353)
T PLN02721 251 VALQE----NVP-KLEDDHKKAKLLAEGLNQIKGLRVNVAAV---ETNIVYFDITD---GSRITAEKLCKSLEEHGVLLM 319 (353)
T ss_pred HHHHH----HHH-HHHHHHHHHHHHHHHHHhCCCcEEecCCc---cceEEEEEccC---CccccHHHHHHHHHhCCcEEe
Confidence 22211 122 2233356778899999875222 12121 12224455541 012467899999999999975
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 824 TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 824 ~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
... .+.+|++++...+++|+++++++|++++.
T Consensus 320 ~~~---~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 320 PGN---SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred cCC---CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 432 47899999888999999999999988754
No 141
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.76 E-value=3.3e-16 Score=180.49 Aligned_cols=288 Identities=17% Similarity=0.204 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC---------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 590 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~--------- 590 (946)
...++.+.|+++++.+. .++.++|++++++++.++|.|...++..+|++|+ ...+.||....+..+.|.
T Consensus 78 ~~~~la~~L~~~~~~~~-~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 156 (397)
T TIGR03246 78 PVLRLAKKLVDATFADK-VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAP 156 (397)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCC
Confidence 34578899999987664 4677899999999999999886544323455565 567889998776665443
Q ss_pred ---EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc---cCHHHHHHHHHHcCCEEEEeccccccccc
Q 002263 591 ---KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVG 663 (946)
Q Consensus 591 ---~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~g 663 (946)
.+..+|. .|+++++++++ +++++|+++.++ +.|++. .++++|+++|++||+++++|.++ .|
T Consensus 157 ~~~~~~~~~~-----~d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tG 224 (397)
T TIGR03246 157 LPGGIKHAPY-----NDLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ----TG 224 (397)
T ss_pred CCCceEEeCC-----CCHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hc
Confidence 2334443 38999999996 689999988654 456553 25999999999999999999975 33
Q ss_pred ccCCCcc--------CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCcc
Q 002263 664 LTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 664 l~~pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~ 735 (946)
+.+.|.+ -+|++++ .|.++ ||..+|.+++++++.+.+.... . .+..+
T Consensus 225 ~Gr~G~~~a~~~~gv~pDi~t~--~K~lg-----gG~pigav~~~~~i~~~~~~~~-------------~-~~t~~---- 279 (397)
T TIGR03246 225 VGRTGELYAYMHYGVTPDILTS--AKALG-----GGFPIGAMLTTTEIAAHLKVGT-------------H-GTTYG---- 279 (397)
T ss_pred CCccccchhhhhcCCCCCEEEe--ehhhh-----CCcceeEEEEcHHHHHhccCCC-------------c-CCCCC----
Confidence 3333322 3688765 47763 4567888888888766553110 0 01111
Q ss_pred chhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHH
Q 002263 736 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 810 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~ 810 (946)
++...++++.+.|..+..+.+ .++...+.++|.++|++. +.+. ..+ .+.. +.+.+.. .......+
T Consensus 280 ~~p~~~aaa~a~l~~~~~~~l---~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg-~G~~---~~i~~~~---~~~~~~~~ 349 (397)
T TIGR03246 280 GNPLACAVAGKVLDLVNTPEL---LAGVKQRHDLFVDGLEKINARYNVFSEIRG-KGLL---IGAVLTE---AYQGKAKQ 349 (397)
T ss_pred CCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhcCCCeEeeec-CceE---EEEEEcC---chhhHHHH
Confidence 244445566677776655443 344557788899988764 2221 112 1221 1222210 00124578
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 811 i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+.|.++|+.+.... ++.+|++|+..+|++|||++++.|.+++++
T Consensus 350 ~~~~l~~~Gv~~~~~g---~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 350 FVNAAAEEGVIALIAG---PNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHHCCeEEeecC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999875332 378999999999999999999999988765
No 142
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.76 E-value=6.7e-17 Score=183.00 Aligned_cols=289 Identities=18% Similarity=0.197 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC
Q 002263 519 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 598 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~ 598 (946)
.....++++.+++++|.+.. +.+++|+++.++++.++. +++++|++++..|+.....+...|++++.++.
T Consensus 45 ~~~~~~l~~~la~~~~~~~~-iv~~sg~~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~- 114 (349)
T cd06454 45 SDLHEELEEELAEFHGKEAA-LVFSSGYAANDGVLSTLA--------GKGDLIISDSLNHASIIDGIRLSGAKKRIFKH- 114 (349)
T ss_pred chHHHHHHHHHHHHhCCCCE-EEeccHHHHHHHHHHHhc--------CCCCEEEEehhhhHHHHHHHHHcCCceEEecC-
Confidence 34556788999999998753 566777766544333221 25688999998888777778889999988863
Q ss_pred CCCCCCHHHHHHHHHhcC--CCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc-------cCCC
Q 002263 599 AKGNINIEELRKAAEANR--DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-------TSPG 668 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~--~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-------~~pg 668 (946)
.|++++++++++.. ++++++++++| |.+|++. |+++|+++|+++|+++++|+++.....+. ....
T Consensus 115 ----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~ 189 (349)
T cd06454 115 ----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA-PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGL 189 (349)
T ss_pred ----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccc
Confidence 58899999997532 46788888887 4689998 79999999999999999999874221111 1113
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
..+.|+++.++||+|+. +| |+++.++++.+.+....... ...+... ...++++.+.+
T Consensus 190 ~~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~~~~----------~~~~~~~------~~~~~a~~~~l 246 (349)
T cd06454 190 TDDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYARGF----------IFSTSLP------PAVAAAALAAL 246 (349)
T ss_pred cccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhchhh----------hccCCCC------HHHHHHHHHHH
Confidence 45789999999999853 33 67777766543321110000 0001111 11222333444
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 827 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~ 827 (946)
..+-. +.+..++...+++++.+.|++. +.+. ++.+... +.+... .+.+..+++++|.++|+.+....+
T Consensus 247 ~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~~~~~--~~~~~~-----~~~~~~~~~~~L~~~gI~~~~~~~ 315 (349)
T cd06454 247 EVLQG--GPERRERLQENVRYLRRGLKELGFPVG--GSPSHII--PPLIGD-----DPAKAVAFSDALLERGIYVQAIRY 315 (349)
T ss_pred HHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCCcE--EEEeCC-----ChHHHHHHHHHHHhCCceEEEecC
Confidence 44422 2445566778889999998875 3332 1111111 122121 123568899999999998753333
Q ss_pred C----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 828 P----VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 828 p----~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+ ..+.+|+++...++++|+++++++|+++
T Consensus 316 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 316 PTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 2 1468999999889999999999999764
No 143
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.75 E-value=3e-17 Score=185.04 Aligned_cols=287 Identities=16% Similarity=0.150 Sum_probs=181.5
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHHHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~~~G~~vv~v~~~ 598 (946)
..++++.+++++| +...+.+++|+++.. ++++.+. .++++|+++...|.+... .+.+.|++++.++.+
T Consensus 34 ~~~l~~~~a~~~g-~~~~~~~~~gt~a~~---~~~~~l~-----~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 104 (338)
T cd06502 34 TAKLEARAAELFG-KEAALFVPSGTAANQ---LALAAHT-----QPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGE 104 (338)
T ss_pred HHHHHHHHHHHhC-CCeEEEecCchHHHH---HHHHHhc-----CCCCeEEEecCcceeeecCCcHHHHcCceEEeecCC
Confidence 5678899999999 444455566665543 3334321 256889999998876543 355689999999985
Q ss_pred CCCCCCHHHHHHHHHhcC----CCeEEEEEeCCCccccc-c-cCHHHHHHHHHHcCCEEEEeccccccc---ccc-cCCC
Q 002263 599 AKGNINIEELRKAAEANR----DNLSTLMVTYPSTHGVY-E-EGIDEICKIIHDNGGQVYMDGANMNAQ---VGL-TSPG 668 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~----~~t~~vvvt~Pn~~G~~-~-~~i~~I~~ia~~~g~ll~vD~a~~~a~---~gl-~~pg 668 (946)
. +.+|+++|++++++.. +++++|++++||..|.+ . .++++|+++|+++|+++++|+|+.... .+. ....
T Consensus 105 ~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~ 183 (338)
T cd06502 105 N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTY 183 (338)
T ss_pred C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHH
Confidence 4 7899999999997321 37899999999755643 2 268999999999999999999863211 111 0011
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
..++|+++.++||+|+.| |.++++.++++.+.+...... ..++... +... +++.+
T Consensus 184 ~~~~d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~----~~~~---~~a~~ 238 (338)
T cd06502 184 KSGVDSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRRKQ------------AGGGMRQ----SGFL---AAAGL 238 (338)
T ss_pred HhcCCEEEEeccccCCCc------cceEEECCHHHHHHHHHHHHH------------hCCChhh----HHHH---HHHHH
Confidence 247899999999999644 334566666655443210000 0001110 1111 22233
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH---HCCcccCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM---DYGFHGPT 824 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~---~~Gi~~~~ 824 (946)
..+...++.+..++...+++++.+.|++. +.+ ++ +..+-+.+..+. ......++.+.|. ++|+.+..
T Consensus 239 ~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~----~~~~~~~v~~~~----~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 239 AALENDLWLRRLRHDHEMARRLAEALEELGGLE-SE----VQTNIVLLDPVE----ANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCc-cc----ccCCeEEEecCC----ccHHHHHHHHHHHHhhhCCEEEEe
Confidence 34444456666677888899999999875 322 21 122223444321 0112234444444 67887643
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 825 MSWPVPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 825 ~~~p~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.. .+.+||+++..+|.+|++++++++++
T Consensus 310 ~~---~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 310 WG---EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred cC---CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 32 27899999999999999999999864
No 144
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.75 E-value=1.1e-16 Score=185.03 Aligned_cols=296 Identities=18% Similarity=0.216 Sum_probs=190.4
Q ss_pred cHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 517 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
|..+...++++.+++++|.+. .+..++|++++.+++.++..+ .+++.|+.....|++....+...|.+++.++
T Consensus 87 g~~~~~~~Le~~la~~~g~~~-~l~~~sG~~an~~ai~~l~~~------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~ 159 (402)
T TIGR01821 87 GTNIPHVELEAELADLHGKES-ALVFTSGYVANDATLATLAKI------IPGCVIFSDELNHASMIEGIRHSGAEKFIFR 159 (402)
T ss_pred CCcHHHHHHHHHHHHHhCCCe-EEEECchHHHHHHHHHHhhCC------CCCCEEEEcchHhHHHHHHHHHcCCeEEEEC
Confidence 334456689999999999764 366677887765555443311 1345666666678777777778898887776
Q ss_pred CCCCCCCCHHHHHHHHHhcCC-CeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccc-c----c-CCC
Q 002263 597 TDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-L----T-SPG 668 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~-~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g-l----~-~pg 668 (946)
. .|+++++++++...+ ++++|++++| |.+|.+. |+++|+++|+++|+++++|+++..+..| . . ..+
T Consensus 160 ~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~ 233 (402)
T TIGR01821 160 H-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA-PIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDG 233 (402)
T ss_pred C-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhcc
Confidence 4 388999999875433 6888999998 4689998 7999999999999999999997533211 0 0 011
Q ss_pred -ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHH
Q 002263 669 -YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 669 -~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
...+|+++.++.|.|+. +| |++++++++.+.+.... ... ..+++ ++...++++.+.
T Consensus 234 ~~~~~div~~t~sKa~g~------~G-G~i~~~~~~~~~l~~~~-----------~~~---~~t~~--~~~~~~aaa~aa 290 (402)
T TIGR01821 234 LMHRIDIIEGTLAKAFGV------VG-GYIAASRKLIDAIRSYA-----------PGF---IFTTS--LPPAIAAGATAS 290 (402)
T ss_pred CCCCCeEEEEechhhhcc------CC-ceeecCHHHHHHHHHhC-----------cCc---eecCc--CCHHHHHHHHHH
Confidence 11368888888999853 23 67777766554432100 000 00110 122233344455
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-CCcccCCC
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTM 825 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~Gi~~~~~ 825 (946)
|..+..+ .+..++...+++++.++|++. +++. .+.+++ +.+.+.. ...+.++.++|.+ +||.+...
T Consensus 291 L~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---~~i~~~~-----~~~a~~~~~~L~~~~Gi~v~~~ 358 (402)
T TIGR01821 291 IRHLKES--QDLRRAHQENVKRLKNLLEALGIPVI--PNPSHI---VPVIIGD-----AALCKKVSDLLLNKHGIYVQPI 358 (402)
T ss_pred HHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHhcCCEEEEeE
Confidence 5555433 233344457889999999875 4432 112322 2222220 1135689999875 59987655
Q ss_pred CCC-C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 826 SWP-V---PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 826 ~~p-~---~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+| + ...+||+++..+|++|||+++++|+++++++
T Consensus 359 ~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 359 NYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 444 2 2579999999999999999999999987653
No 145
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.75 E-value=3.5e-16 Score=180.40 Aligned_cols=282 Identities=19% Similarity=0.265 Sum_probs=189.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHh-cCC-CCCCEEE-EcCCCCCCCHHHHHHcCCE-------
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGMK------- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~-~G~-~~~~~Il-i~~saHg~~~~~a~~~G~~------- 591 (946)
..++.+.|+++++.+.+ ++.++|++++++++.++|.|... +|. .+|++|+ ...+.||....+..+.+-.
T Consensus 84 ~~~l~~~l~~~~~~~~~-~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 162 (396)
T PRK04073 84 LGPWYEKVAKLTGKDMV-LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFG 162 (396)
T ss_pred HHHHHHHHHhcCCCCeE-EEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCC
Confidence 45788899999887644 66789999998888888887432 232 2345566 4578999887766554421
Q ss_pred -----EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEecccccccc
Q 002263 592 -----IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 592 -----vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
++.++. .|+++++++++ +++++|+++.+ |.+|.+.++ +++|.++|+++|+++++|+++.
T Consensus 163 ~~~~~~~~~~~-----~d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~---- 230 (396)
T PRK04073 163 PMLPGIKKIPY-----GDLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT---- 230 (396)
T ss_pred CCCCCceEeCC-----CCHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh----
Confidence 233333 27899999986 78999999888 578887632 8999999999999999999764
Q ss_pred cccCCC--------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 663 GLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 663 gl~~pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
++.+.| ...+|++++ .|.+ ++||..+|++.+++++.+.+.... .....+
T Consensus 231 g~g~~g~~~~~~~~~~~pdi~~~--sK~l----g~gg~~ig~~~~~~~i~~~~~~~~--------------~~~t~~--- 287 (396)
T PRK04073 231 GLGRTGKLFACDWDNVTPDMYIL--GKAL----GGGVFPISCVAANRDILGVFTPGS--------------HGSTFG--- 287 (396)
T ss_pred CCCcCcHHHHhhhcCCCCCEEEe--cccc----cCCCCcceEEEEcHHHHhhhcCCC--------------CCCCCC---
Confidence 333322 124688776 4876 356677999999887766542110 001112
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CC-ee-eccCCCceeeeEEEecccccccCCCCHHHH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP-IL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 811 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~-v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i 811 (946)
++...++++.+.|..+-++++.+ +...+.++|.++|++. +. +. .++ .+.+ +.+++. .+..++
T Consensus 288 -~~~~~~aaa~aaL~~~~~~~l~~---~~~~~~~~l~~~L~~l~~~~i~~~~~-~g~~---~~~~~~-------~~~~~~ 352 (396)
T PRK04073 288 -GNPLACAVSIAALEVLEEEKLPE---RSLELGEYFKEQLKEIDNPMIKEVRG-RGLF---IGVELN-------EPARPY 352 (396)
T ss_pred -CCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHhhcCCcccceec-ceEE---EEEEec-------chHHHH
Confidence 23444455566676665555543 3345688899888874 22 11 112 1221 334432 246789
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 812 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 812 ~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.++|.++|+.+.... .+.+||+|+..+|++|+|+++++|++++
T Consensus 353 ~~~l~~~Gv~~~~~~---~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 353 CEALKEEGLLCKETH---ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred HHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 999999999974321 3789999999999999999999998764
No 146
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.75 E-value=3.4e-16 Score=181.02 Aligned_cols=280 Identities=13% Similarity=0.129 Sum_probs=183.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 92 EIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 92 e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
....|..+...++++.+|+++|.+. +.++.+|+.+.++++.++... .+++.|+.+...|+++...++. .|+++
T Consensus 83 ~~~~g~~~~~~~Le~~la~~~g~~~--~l~~~sG~~an~~ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~----~g~~~ 155 (402)
T TIGR01821 83 RNISGTNIPHVELEAELADLHGKES--ALVFTSGYVANDATLATLAKI-IPGCVIFSDELNHASMIEGIRH----SGAEK 155 (402)
T ss_pred hhhhCCcHHHHHHHHHHHHHhCCCe--EEEECchHHHHHHHHHHhhCC-CCCCEEEEcchHhHHHHHHHHH----cCCeE
Confidence 3445666777889999999999754 677888888877666543211 1567777777899999888753 46665
Q ss_pred EEec---cccccc-cC----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC-----C---
Q 002263 172 VVSD---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----E--- 234 (946)
Q Consensus 172 ~~~~---~~~l~~-i~----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~-----~--- 234 (946)
..++ .+++++ ++ +++++|++.+| |.+|.+.|+++|.++|+++|++++|| +.+++|...+.+ .
T Consensus 156 ~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~ 234 (402)
T TIGR01821 156 FIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLD-EVHAVGLYGPRGGGIAERDGL 234 (402)
T ss_pred EEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEe-CcccccccCCCCCccchhccC
Confidence 5443 345555 32 36788888888 67999999999999999999999994 334444332211 1
Q ss_pred -ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 235 -LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 235 -~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
...|+++++. |.|+.+ | |++..++++++.+... .+.|.+ .++.| +.
T Consensus 235 ~~~~div~~t~sKa~g~~------G-G~i~~~~~~~~~l~~~----------~~~~~~------------t~~~~---~~ 282 (402)
T TIGR01821 235 MHRIDIIEGTLAKAFGVV------G-GYIAASRKLIDAIRSY----------APGFIF------------TTSLP---PA 282 (402)
T ss_pred CCCCeEEEEechhhhccC------C-ceeecCHHHHHHHHHh----------CcCcee------------cCcCC---HH
Confidence 2368988887 888642 2 6787887776655100 000110 00111 11
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHH-cCCeee
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLR 388 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~-~GI~~~ 388 (946)
...+..+++ .++... +.+.++..++.+++++.|+++| ++++.. ..+.+.+.++. +.++.++|.+ +||.++
T Consensus 283 ~~aaa~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~ 356 (402)
T TIGR01821 283 IAAGATASI--RHLKES--QDLRRAHQENVKRLKNLLEALG-IPVIPN-PSHIVPVIIGDAALCKKVSDLLLNKHGIYVQ 356 (402)
T ss_pred HHHHHHHHH--HHhhcC--HHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHhcCCEEEE
Confidence 222333343 333222 4556667789999999999987 776532 12233444432 5789999875 599986
Q ss_pred ee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 389 VV-------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 ~~-------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.. ..+.+|++++.++|++|+++++++|..
T Consensus 357 ~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 357 PINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred eECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 53 125799999999999999999999964
No 147
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.74 E-value=8.8e-16 Score=174.95 Aligned_cols=278 Identities=17% Similarity=0.152 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 177 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~- 177 (946)
..+.++++.+|+++|+ .++.+++|+|.++.+++.++. . +||+|++++..|.+....+ +..|++++.++.+
T Consensus 44 ~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~-~--~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~ 114 (361)
T cd06452 44 PPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC-E--KGDWVVVDGLAHYTSYVAA----ERAGLNVREVPNTG 114 (361)
T ss_pred chHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc-C--CCCEEEEcCCcchHHHHHH----HhcCCEEEEEecCC
Confidence 4577889999999998 458899999988777666652 3 7899999999998887553 3468888887542
Q ss_pred ---------cccc-cC-------CCEeEEEEEcCC-CceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccce
Q 002263 178 ---------DIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGAD 238 (946)
Q Consensus 178 ---------~l~~-i~-------~~t~~v~v~~pn-~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaD 238 (946)
++++ ++ +++++|++++|+ .+|.+.|+++|+++||++|++++++. ..+.+.+ .+..++|+|
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNG-AYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEEC-CcccCCcCCCHHHcCCC
Confidence 2333 33 378999999984 59999999999999999999999943 3455543 234578999
Q ss_pred EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHH
Q 002263 239 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 317 (946)
Q Consensus 239 i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~ 317 (946)
++++|+ |+|+.| +++|++++++++.+++-... .+ |.+. + .....+|++. .+..++
T Consensus 194 ~~~~s~~K~l~~~-----~~~G~l~~~~~~~~~l~~~~---------~~-~~~~-----~-~~~~~~~~~~---~~~~~~ 249 (361)
T cd06452 194 FIVGSGHKSMAAS-----APIGVLATTEEWADIVFRTS---------QM-FKIK-----E-VELLGCTLRG---APLVTL 249 (361)
T ss_pred EEEecCCccccCC-----CCeEEEEECHHHHHHHhccc---------cc-cccc-----e-eeeeccccCc---hHHHHH
Confidence 999998 777533 35889999988877652110 00 1110 0 0011223222 233344
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC--CCcCeEEEecCC-----------HHHHHHHHHHc
Q 002263 318 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PFFDTVKVKCAD-----------AHAIASAAYKI 383 (946)
Q Consensus 318 ~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~--~~~~~~~i~~~~-----------~~~v~~~L~~~ 383 (946)
++++ .+. .+.++. ..+..+++++++++|+++ | ++++.. ...+.+.++.+. +.++.+.|.++
T Consensus 250 ~~al--~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g-~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 324 (361)
T cd06452 250 MASF--PHV-KERVKR-WDEEVEKARWFVAELEKIEG-IKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKR 324 (361)
T ss_pred HHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHhcCCC-eEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHc
Confidence 4444 111 122333 333456678999999999 7 998731 112223343321 34699999999
Q ss_pred CCeeeeec-CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 384 EMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 384 GI~~~~~~-~~~lris~~~~~t~edid~ll~~l~ 416 (946)
||.+.... ...+|++. ...|++|++.++++|+
T Consensus 325 gI~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~ 357 (361)
T cd06452 325 GIHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFK 357 (361)
T ss_pred CceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHH
Confidence 99863322 34678777 3479999999999997
No 148
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=2.8e-16 Score=182.49 Aligned_cols=336 Identities=16% Similarity=0.204 Sum_probs=208.2
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r 557 (946)
..+|++.+.+..++..+. ....+....-+. .+...++.+.|+++++ ++.+ ++.++|+.++++++..+|
T Consensus 54 ~~lGh~~p~v~~ai~~q~-~~~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~v-~f~~sGseA~e~A~klar 123 (423)
T PRK05964 54 ATHGHNHPYIDQAIREQL-DRLDHVIFAGFT--------HEPAERLAQRLVALTPGGLDHV-FFSDSGSVAVEVALKMAL 123 (423)
T ss_pred ccCCCCCHHHHHHHHHHH-hhCCCccccccC--------CHHHHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHHHH
Confidence 357887776666655552 211111100011 1234477888888874 4433 567899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEE
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK--GNINIEELRKAAEANRDNLSTL 622 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~v 622 (946)
.|...+|.++|.+|| ...++||....+....+- .+..+++..+ ...+++++++.++++.+++++|
T Consensus 124 ~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaav 203 (423)
T PRK05964 124 QYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAF 203 (423)
T ss_pred HHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEE
Confidence 987666655566776 567889987666443221 2334443211 1223889999997666788888
Q ss_pred EEeC-C-Ccccccc---cCHHHHHHHHHHcCCEEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCC
Q 002263 623 MVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGG 689 (946)
Q Consensus 623 vvt~-P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~ 689 (946)
++.. . +..|+.. +.+++|.++|++||+++++|+++ .|+.++|. ..+|++++ .|+|+ +
T Consensus 204 i~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~----g 273 (423)
T PRK05964 204 IVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA----TGFGRTGTLFACEQAGVSPDIMCL--SKGLT----G 273 (423)
T ss_pred EEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCcchhHHHhcCCCCCeeee--ehhhh----c
Confidence 8864 2 3446543 24999999999999999999975 34444442 23688776 49883 3
Q ss_pred CCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHH
Q 002263 690 GGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANY 769 (946)
Q Consensus 690 GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~ 769 (946)
|+-.+|.+++++++.+.+..... . . .. ...+.+.++...++++.+.+..+..+++. ++...+.++
T Consensus 274 G~~p~~av~~~~~i~~~~~~~~~-~--------~--~~-~~~~T~~~np~~~aaa~a~l~~l~~~~~~---~~~~~~g~~ 338 (423)
T PRK05964 274 GYLPLAATLCTAEIFEAFYSDDR-A--------K--AF-MHSPSYTANPLACAAANASLDLFEDEPVL---ERVAALSAG 338 (423)
T ss_pred CcccceEEEEcHHHHHhhhcCCc-c--------c--cc-ccCCCCCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHH
Confidence 43457778888887765531100 0 0 00 00111234556666677777777665544 445567788
Q ss_pred HHHHHhcc--CCee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHH
Q 002263 770 MAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEE 845 (946)
Q Consensus 770 l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~e 845 (946)
++++|++. +... ..+ .+.. +.+.+.... .+.....+.+.|.++|+.+... .+.+|++|+..+|++|
T Consensus 339 l~~~l~~l~~~~~i~~vrg-~Gl~---~~i~l~~~~--~~~~~~~l~~~l~~~Gv~v~~~----~~~lR~~p~l~~t~ed 408 (423)
T PRK05964 339 LAEGLEPFRDLPGVADVRV-LGAI---GAVELDRPV--LERDGPALRAFALERGVLLRPL----GNTIYLMPPYIITAEE 408 (423)
T ss_pred HHHHHHhhccCCCeEEeec-ccEE---EEEEeccCc--chhHHHHHHHHHHHCCeEEEec----CCEEEEeCCcccCHHH
Confidence 88888764 2221 112 1221 223332100 0012568899999999987532 3689999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 002263 846 LDRYCDALISIREEI 860 (946)
Q Consensus 846 id~~~~aL~~i~~e~ 860 (946)
||+++++|+++++|+
T Consensus 409 Id~~v~~l~~al~~~ 423 (423)
T PRK05964 409 LDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998763
No 149
>PRK15029 arginine decarboxylase; Provisional
Probab=99.74 E-value=2.2e-16 Score=189.78 Aligned_cols=300 Identities=14% Similarity=0.127 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.+.|.|+.+++++|.+.+.+.+|++++|+.++++++. +++++||+++.+|-+...++.+.|++.++++..-+
T Consensus 206 ~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~--------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~ 277 (755)
T PRK15029 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRN 277 (755)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 4889999999999999988889999999987776543 25689999999999999999999999999965322
Q ss_pred -----CCCC-----HHHHHHHHHhcCCCeE--------EEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc
Q 002263 601 -----GNIN-----IEELRKAAEANRDNLS--------TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 601 -----g~~D-----~e~L~~~i~~~~~~t~--------~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
+.++ ++.++++|+++ ++.+ ++++|+|++.|++. |+++|+++||++|++++||.||.. ..
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGa-h~ 354 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYDGVCY-NAKEAQDLLEKTSDRLHFDEAWYG-YA 354 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhC-chhhhccccCceEEEEECCCCcceee-CHHHHHHHHHhcCCeEEEECcccc-cc
Confidence 3455 99999999875 3444 89999999999998 899999999999999999998742 22
Q ss_pred cccC--CC---------c-cCCC-EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC-
Q 002263 663 GLTS--PG---------Y-IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG- 728 (946)
Q Consensus 663 gl~~--pg---------~-~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~- 728 (946)
+|.+ |. . .|+| +++.|.||+++.- ...+++-++.. .+.+....+. .+..
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~al-----TQaS~LHv~~~-~~~id~~r~~-----------~~l~~ 417 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNAL-----SQASYIHVREG-RGAINFSRFN-----------QAYMM 417 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccch-----hhhhhheeCCC-ccccCHHHHH-----------HHHHH
Confidence 2211 11 2 6899 9999999998531 12334444322 0011100000 0000
Q ss_pred CcccCccchhhHHH---HHHHHHHH-HcHhhHHHHHHHHHHHHHHHHHHHhccCC-------------------------
Q 002263 729 TIAAAPWGSALILP---ISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEKHYP------------------------- 779 (946)
Q Consensus 729 ~i~~~~~g~~~~~~---~a~a~l~~-lG~eGl~~~~~~~~~~a~~l~~~L~~~~~------------------------- 779 (946)
..+||| +..+++ .|-.+|.. .|. +..+..+..+..++++|.++..
T Consensus 418 ~qSTSP--SY~LmASLD~ar~~m~~~~G~----~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 491 (755)
T PRK15029 418 HATTSP--LYAICASNDVAVSMMDGNSGL----SLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGK 491 (755)
T ss_pred HcCCCc--HHHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccc
Confidence 012222 333332 22333332 333 3344556677777777754311
Q ss_pred -------------------eeeccCC--------------CceeeeEEEeccccc-----ccCCCCHHHHHHHHHHCCcc
Q 002263 780 -------------------ILFRGVN--------------GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 780 -------------------v~~~~~~--------------~~~~~e~v~~~~~~~-----~~~g~~~~~i~~~L~~~Gi~ 821 (946)
++-++.. +| -.+++.++... .+.|+.+..+.+.|.++||.
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp--~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~ 569 (755)
T PRK15029 492 TYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDP--IKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIV 569 (755)
T ss_pred cccccccchhhhccccceeeecccccccCcccccccccccCC--ceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCE
Confidence 0100000 01 12233332110 12234455899999899998
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 822 ~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+...+ ...+.+-++...|++++++++++|.++.+.
T Consensus 570 ~E~~~---~~~vL~l~s~g~t~~~~~~L~~aL~~~~~~ 604 (755)
T PRK15029 570 PTRTT---DFQIMFLFSMGVTRGKWGTLVNTLCSFKRH 604 (755)
T ss_pred EEecC---CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 76444 356777778889999999999999988543
No 150
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.74 E-value=1.2e-16 Score=182.69 Aligned_cols=309 Identities=13% Similarity=0.060 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH--HHHcCC-EE
Q 002263 519 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGM-KI 592 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~--a~~~G~-~v 592 (946)
.+++.+.++.+++++|.+. +.+.+++|+.+..+++..+ . . .++..+++ ...|+..-.. ++..|+ ++
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l---~-~---~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v 118 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL---L-G---ARRVDHLA-WESFGSKWATDVVKQLKLEDP 118 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc---C-C---CCcceEEE-eCHHHHHHHHHHHhhcCCCCc
Confidence 3678899999999999853 3345557776665544333 1 1 12344554 4566654432 356799 99
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+.++.+.++.+|+++ ++ . ++.|.+++- +.+|+.. |+++|++ |++|++++||+++..+...+ ... .
T Consensus 119 ~~~~~~~g~~~d~~~----i~---~-~~~V~~~h~~t~tG~~~-pi~~I~~--~~~g~~~vVDa~qs~G~~pi-dv~--~ 184 (378)
T PRK03080 119 RVLEADYGSLPDLSA----VD---F-DRDVVFTWNGTTTGVRV-PVARWIG--ADREGLTICDATSAAFALPL-DWS--K 184 (378)
T ss_pred eEeccCCCCCCCHhh----cC---C-CCCEEEEecCCccceec-cchhhcc--ccCCCeEEEecccccccCCC-CHH--H
Confidence 999987777888776 32 1 344666765 5789999 7999999 89999999999875332222 112 3
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC----CCC------CCCCCCCCCCcccCccchhhHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GIP------APEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~----d~~------~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
+|+++++.||||+. .||+|++++++++.+.+.....++.. ++. ....+..+.++. ....+
T Consensus 185 iD~~~~s~~K~l~~-----P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp-----~i~~i 254 (378)
T PRK03080 185 LDVYTFSWQKVLGG-----EGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTP-----SMLTV 254 (378)
T ss_pred CcEEEEehhhhCCC-----CCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCc-----hHHHH
Confidence 79999999999953 36899999998776554322222110 110 000111222211 11112
Q ss_pred HHHHHHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 742 PISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 742 ~~a~a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
....+.|..+-++ |+.++.++...+++++.++|++. +.+....+.......+.|.++.. ..+. ..++.++|.++
T Consensus 255 ~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~--~~~~-~~~~~~~l~~~ 331 (378)
T PRK03080 255 EDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA--QAAV-DAAAVAKLLRE 331 (378)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc--hHHH-HHHHHHHHHHc
Confidence 2223455666666 78888888889999999999875 33321111111111234443310 0012 23566777777
Q ss_pred CcccCCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 819 Gi~~~~~~~p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
|+.+..-.+. ..+.+|+++..++|++|||+|+++|++++++.+.
T Consensus 332 ~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 332 NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 8775421111 2478999999999999999999999999887654
No 151
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=3.7e-16 Score=181.12 Aligned_cols=292 Identities=17% Similarity=0.200 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
....++++.+++++|.+. .+..++|++++.+++.++. .. .+++.|+++...|+++...+.+.|.+++.++.
T Consensus 91 ~~~~~Le~~la~~~g~~~-~i~~~sG~~a~~~~i~~l~----~~--~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-- 161 (410)
T PRK13392 91 HPHVLLERELADLHGKES-ALLFTSGYVSNDAALSTLG----KL--LPGCVILSDALNHASMIEGIRRSGAEKQVFRH-- 161 (410)
T ss_pred HHHHHHHHHHHHHhCCCC-EEEECcHHHHHHHHHHHHh----cC--CCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC--
Confidence 345689999999999764 4666778776644443221 10 13467777777888887778889999887764
Q ss_pred CCCCCHHHHHHHHHhcC-CCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc------CCC-cc
Q 002263 600 KGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YI 670 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~------~pg-~~ 670 (946)
.|.+++++.+++.. +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++..+..+-. .++ ..
T Consensus 162 ---~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~ 237 (410)
T PRK13392 162 ---NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIA-PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMD 237 (410)
T ss_pred ---CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCC
Confidence 26777887776432 578999999994 689887 799999999999999999999753221100 011 11
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
..|+++.+++|+|+. +| |++.+++++.+.+.... . . ...+++ .+...+.++.+.|..
T Consensus 238 ~~div~~tlsK~~g~------~G-G~~~~~~~~~~~l~~~~-----------~--~-~~~s~~--~~~~~~~a~~aaL~~ 294 (410)
T PRK13392 238 RIDMIQGTLAKAFGC------LG-GYIAASADLIDFVRSFA-----------P--G-FIFTTA--LPPAVAAGATAAIRH 294 (410)
T ss_pred CCcEEEEEChHhhhc------cc-chhhcCHHHHHHHHHhC-----------c--c-hhccCc--CCHHHHHHHHHHHHH
Confidence 468888899999864 33 67777766554321100 0 0 001110 012223333444544
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcccCCCCCC
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTMSWP 828 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~~~~~p 828 (946)
+...+ +..++...+++++.+.|++. +++. ++ .+.+ +.+.+.. +.+..+++++|. ++||.+....+|
T Consensus 295 ~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~~---~~i~~~~-----~~~~~~~~~~L~~~~GI~v~~~~~p 362 (410)
T PRK13392 295 LKTSQ--TERDAHQDRVAALKAKLNANGIPVM-PS-PSHI---VPVMVGD-----PTLCKAISDRLMSEHGIYIQPINYP 362 (410)
T ss_pred HhcCH--HHHHHHHHHHHHHHHHHHHcCCCCC-CC-CCCE---EEEEeCC-----HHHHHHHHHHHHHhCCEEEeeeCCC
Confidence 43322 23355667788999999874 4432 21 2222 2232220 123568999997 689998655444
Q ss_pred -C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 829 -V---PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 829 -~---~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+ ...+||+++..+|++|+|+++++|.++.++
T Consensus 363 ~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 363 TVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 2 258999999999999999999999988654
No 152
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.73 E-value=4e-16 Score=172.04 Aligned_cols=169 Identities=21% Similarity=0.337 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH---HHcCCEEEEEc
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVG 596 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a---~~~G~~vv~v~ 596 (946)
..+++.++.+++|.|.+...+..++|++ ++..++++......+++....||....+|++.-.++ +-.|++|+.+|
T Consensus 85 ~~~E~aR~~VAklInAd~~dIiFts~AT--Es~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lp 162 (428)
T KOG1549|consen 85 DAVEAAREQVAKLINADPSDIVFTSGAT--ESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLP 162 (428)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCch--HHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEec
Confidence 3488999999999999975544445542 244555555443333312226888899999888774 45789999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
++.+|.+|++.+++.|+ ++|++|.+..-| ..|+.. |++||+++|++.|++||+|+||..+... ....++++|++
T Consensus 163 v~~~~~~d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~-Pv~EI~~icr~~~v~v~~DaAQavG~i~-vDV~eln~D~~ 237 (428)
T KOG1549|consen 163 VEDSGLVDISKLREAIR---SKTRLVSIMHVNNEIGVLQ-PVKEIVKICREEGVQVHVDAAQAVGKIP-VDVQELNADFL 237 (428)
T ss_pred cCccccccHHHHHHhcC---CCceEEEEEecccCccccc-cHHHHHHHhCcCCcEEEeehhhhcCCcc-ccHHHcCchhe
Confidence 99889999999999997 899999998875 579999 7999999999999999999998533322 23457899999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEec
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKK 701 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~ 701 (946)
+++.|||| |-||+|+++|++
T Consensus 238 s~s~HK~y------gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 238 SISAHKIY------GPPGIGALYVRR 257 (428)
T ss_pred eeeccccc------CCCcceEEEEcc
Confidence 99999997 446799999996
No 153
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=8.9e-16 Score=174.24 Aligned_cols=211 Identities=14% Similarity=0.128 Sum_probs=156.8
Q ss_pred HHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---ccc
Q 002263 103 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 179 (946)
Q Consensus 103 e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l 179 (946)
.+++.+|+|.|.+. +.++++|++|+.++++++ ++ +||+||+++..|..+...++..++++|+++.++|. +++
T Consensus 66 ~le~~la~LEg~~~--a~~~~SGmaAi~~~~~~l-l~--~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 66 SLQEAMCELEGGAG--CALYPCGAAAVANAILAF-VE--QGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred HHHHHHHHHhCCCe--EEEEhHHHHHHHHHHHHH-cC--CCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 46689999999875 788999999999887766 33 89999999999999998887767779999999876 446
Q ss_pred cc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCC--cEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 180 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 180 ~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~g--al~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++ ++++|++|++++| |.+|.+.||++|+++||++| ++++|+ +.++.+.+.+|.++||||++.|+ |++++|-.
T Consensus 141 ~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVD-nT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsd-- 217 (395)
T PRK08114 141 AKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMID-NTWAAGVLFKALDFGIDISIQAGTKYLVGHSD-- 217 (395)
T ss_pred HHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEE-CCCccccccCHHHcCCcEEEEcCcccccCCCc--
Confidence 66 8889999999998 78999999999999999985 999994 45677777889999999999999 77765422
Q ss_pred CCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 255 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 255 GP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
-.+|+++.+++..+.+- ..++..|. .. ++. ..|+...|-+-|.-.
T Consensus 218 -v~~G~v~~~~~~~~~l~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR 262 (395)
T PRK08114 218 -AMIGTAVANARCWEQLR-------------------------ENSYLMGQ--MV--DAD-----TAYMTSRGLRTLGVR 262 (395)
T ss_pred -ceeEEEEcCHHHHHHHH-------------------------HHHHhccC--CC--CHH-----HHHHHHcCCCcHHHH
Confidence 14577777665433220 00011110 00 111 113445555555566
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
.+|..++|..+++.|++.+.++
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEe
Confidence 6778899999999999875343
No 154
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=6.1e-16 Score=179.00 Aligned_cols=311 Identities=13% Similarity=0.125 Sum_probs=193.3
Q ss_pred ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHH
Q 002263 55 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 134 (946)
Q Consensus 55 ~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~l 134 (946)
.++|+|...+|..+.+.. +.+. + |.+..+ .+....|..+...++++.+|+++|.+. +.++++|+.+.++++.
T Consensus 52 sn~ylgl~~~p~v~~a~~-~~~~-~--~~~~~~--~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~SG~~An~~ai~ 123 (406)
T PRK13393 52 SNDYLGMGQHPAVLAAMH-EALD-T--CGAGAG--GTRNISGTNHYHVLLEAELADLHGKEA--ALLFTSGYVSNWAALS 123 (406)
T ss_pred cccccCCCCCHHHHHHHH-HHHH-H--cCCCCc--ccccccCChHHHHHHHHHHHHHhCCCc--EEEeCCcHHHHHHHHH
Confidence 345777775543333332 2322 1 222211 222333555677889999999999754 6778888877777654
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec---cccccc-c----CCCEeEEEEEcC-CCceeecchHH
Q 002263 135 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-K----SGDVCGVLVQYP-GTEGEVLDYGD 205 (946)
Q Consensus 135 a~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~---~~~l~~-i----~~~t~~v~v~~p-n~~G~i~di~~ 205 (946)
++.. ..+++.|++++..|+++...++. .|.+++.++ ++++++ + ++++++|++.++ |.+|.+.|+++
T Consensus 124 ~l~~-~~~g~~I~~~~~~H~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~ 198 (406)
T PRK13393 124 TLGS-RLPGCVILSDELNHASMIEGIRH----SRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAE 198 (406)
T ss_pred Hhhc-CCCCCEEEEccchhHHHHHHHHH----cCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHH
Confidence 3321 11568888888999999998853 355555543 455554 3 236788888887 67999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCCCCCC---------ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCce
Q 002263 206 FIKNAHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 275 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al~~l~~~~~---------~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~ 275 (946)
|.++|+++|++++|| +.++.|.+.+.+. -..|+++++. |.|+.+ | ||+..++++.+.+..
T Consensus 199 i~~l~~~~~~~livD-ea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~------G-G~~~~~~~~~~~l~~-- 268 (406)
T PRK13393 199 ICDVAEKHGAMTYLD-EVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM------G-GYITGSAALCDFIRS-- 268 (406)
T ss_pred HHHHHHHcCCEEEEE-CCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc------C-ceeeCCHHHHHHHHH--
Confidence 999999999999994 3444444322211 1258888886 988642 2 677777776655410
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCE
Q 002263 276 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 355 (946)
Q Consensus 276 ~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 355 (946)
..+.|.. .++. .+....+..+++ .++...+. ..++..++.++|++.|+++| +
T Consensus 269 --------~~~~~~~------------t~~~---~p~~~aa~~aaL--~~~~~~~~--~~~~~~~~~~~l~~~L~~~g-~ 320 (406)
T PRK13393 269 --------FASGFIF------------TTSL---PPAVAAGALASV--RHLKASSA--ERERHQDRVARLRARLDKAG-I 320 (406)
T ss_pred --------hCcCcee------------cCcc---CHHHHHHHHHHH--HHHhhCHH--HHHHHHHHHHHHHHHHHHcC-C
Confidence 0000100 0000 111223333443 33322332 23556788999999999887 7
Q ss_pred EEcCCCCcCeEEEecCC---HHHHHHHHHH-cCCeeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 356 EVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 356 ~~~~~~~~~~~~i~~~~---~~~v~~~L~~-~GI~~~~~~-------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+++.. ....+.+.+++ +.++.++|.+ +||.++... .+.||+|++.++|++|+++++++|..
T Consensus 321 ~~~~~-~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 321 PHLPN-PSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred CcCCC-CCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 66532 12223333332 5789999987 599986531 26799999999999999999999974
No 155
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.73 E-value=2.3e-17 Score=185.73 Aligned_cols=288 Identities=22% Similarity=0.247 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.+.|.|+.+++++|.+.+.+.+|++++|+.++++++. +++++||+++.+|.+...++.+.|+++++++...+
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~--------~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALC--------RPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN 138 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHT--------TTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhc--------CCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc
Confidence 4889999999999999988889999989988877663 26789999999999999999999999999976422
Q ss_pred -----CCCCH-----HHHHHHHHhcCCCeE---EEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccccc--
Q 002263 601 -----GNINI-----EELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-- 665 (946)
Q Consensus 601 -----g~~D~-----e~L~~~i~~~~~~t~---~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-- 665 (946)
+.+++ ++++++|+++ ++.+ +|++|+|++.|++- |+++|+++||++|.+|+||+|+.. ..+|.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~-p~~k~~~~vvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGa-h~~F~~l 215 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEH-PDAKAPRLVVLTSPTYYGVCY-DIKEIAEICHKHGIPLLVDEAHGA-HFGFHPL 215 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHC-TTCHCESEEEEESS-TTSEEE--HHHHHHHHCCTECEEEEE-TT-T-TGGCSGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhC-ccccCceEEEEeCCCCCeEEE-CHHHHHHHhcccCCEEEEEccccc-cccCCCC
Confidence 35667 9999999986 4444 49999999999998 899999999999999999999752 22332
Q ss_pred --CCCccCCC-------EEEeCCCcccccCCCCCCCcceeEEEeccc-CCCCCCCccccCCCCCCCCCCCCCCC-cccCc
Q 002263 666 --SPGYIGAD-------VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGT-IAAAP 734 (946)
Q Consensus 666 --~pg~~GaD-------i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~lp~~~v~~~~d~~~~~~~~~~~~-i~~~~ 734 (946)
..-.+|+| +++.|.||+++. --..+.+-++... +.. ..+. ....- .+|||
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~a-----ltQts~lh~~~~~~v~~---~~~~-----------~~l~~~~TTSP 276 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPA-----LTQTSMLHVKGDRIVDH---ERVN-----------EALSMHQTTSP 276 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS------TT-EEEEEETCCCTTH---HHHH-----------HHHHHHS-SS-
T ss_pred ccchhhccCccccccceeeeechhhcccc-----cccceEEEecCCCcccH---HHHH-----------HHHHHHcCCCh
Confidence 12357999 999999999852 2245677776543 211 0000 00000 02222
Q ss_pred cchhhHHHHHHHHHHHH-cHhhHHHHHHHHHHHHHHHHHHH---hcc--CCeee----ccCC------Cceee-------
Q 002263 735 WGSALILPISYTYIAMM-GSKGLTEASKIAILNANYMAKRL---EKH--YPILF----RGVN------GTVAH------- 791 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~l-G~eGl~~~~~~~~~~a~~l~~~L---~~~--~~v~~----~~~~------~~~~~------- 791 (946)
+..+++..=....+| +.+| ++..++.+.++..++++| +++ +.+.. .++. +...|
T Consensus 277 --SY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~ 353 (417)
T PF01276_consen 277 --SYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLAD 353 (417)
T ss_dssp ---HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--T
T ss_pred --HHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhccc
Confidence 333333222233444 4455 345567778899999998 333 33221 1100 00001
Q ss_pred -e-------EEEecccc-----cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHH
Q 002263 792 -E-------FIVDLRGL-----KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 844 (946)
Q Consensus 792 -e-------~v~~~~~~-----~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~ 844 (946)
. +++.++.+ ..+.|+++..+.+.|.++||.+...+ ...+.+-+|...|++
T Consensus 354 ~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d---~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 354 DYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTD---LYNVLFLFTIGDTKE 416 (417)
T ss_dssp TSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEE---SSEEEEE--TTS-HH
T ss_pred CccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEecc---CccEEEEecCCCCCC
Confidence 1 22332111 02357899999999999999886443 356777677666653
No 156
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.73 E-value=4.8e-16 Score=176.75 Aligned_cols=298 Identities=15% Similarity=0.120 Sum_probs=193.7
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCC--
Q 002263 67 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK-- 144 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd-- 144 (946)
..|+.+.+.+.+. ...|+ +.-+.+.++++.+++++|.+ ++.+++|+|++...+++++. . +||
T Consensus 24 ~~~~~v~~a~~~~---~~~~~--------~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al~-~--~Gd~~ 87 (363)
T TIGR01437 24 TVSDEVADAQKRG---AQNYF--------EIKELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAVI-T--RGNRY 87 (363)
T ss_pred CCCHHHHHHHHHH---HhcCC--------CHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHHh-c--CCCcc
Confidence 3777777777753 22232 12356778999999999987 47899999999888877662 3 555
Q ss_pred -------------EEEEcCCCCHHHHHHHHHhhcCCCeEEEEec------cccccc-cCCCEeEEE-EEc-CCCceeecc
Q 002263 145 -------------TFIIASNCHPQTIDICITRADGFDIKVVVSD------LKDIDY-KSGDVCGVL-VQY-PGTEGEVLD 202 (946)
Q Consensus 145 -------------~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~------~~~l~~-i~~~t~~v~-v~~-pn~~G~i~d 202 (946)
+||++...++.+...+.......|.++++++ ++++++ ++++|++++ +++ +|++|.+.|
T Consensus 88 ~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~ 167 (363)
T TIGR01437 88 LVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLS 167 (363)
T ss_pred hhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCC
Confidence 7777763333222122222334688888765 356777 888999776 555 478999999
Q ss_pred hHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeec
Q 002263 203 YGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 281 (946)
Q Consensus 203 i~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d 281 (946)
+++|+++||++|+++++++ ..+.. +....++|+|++++|+ |+|+ ||..|+++.++++++.+.....|
T Consensus 168 ~~~i~~~a~~~gi~vivD~-a~~~~-~~~~~~~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~~~~~~~---- 235 (363)
T TIGR01437 168 VEDAAQVAQEHNLPLIVDA-AAEED-LQKYYRLGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWVKLQSKG---- 235 (363)
T ss_pred HHHHHHHHHHcCCeEEEEC-CCCCc-hHHHHHcCCCEEEEeCCcccC------CCceEEEEEcHHHHHHHHhccCC----
Confidence 9999999999999999943 22321 1223467999999998 6564 45578888888777655321111
Q ss_pred CCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-
Q 002263 282 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL- 360 (946)
Q Consensus 282 ~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~- 360 (946)
..+ ..+.+|. .+.++.+++ .++...|.+.+.++.. .+.+++++|++++|+++...
T Consensus 236 --~~~-------------~~~~~~~------~~~gl~aAl--~~~~~~~~~~~~~~~~-~~~~l~~~L~~i~g~~~~~~~ 291 (363)
T TIGR01437 236 --IGR-------------AMKVGKE------NILGLTAAL--EQYLSTGKESGAEMVA-KLTPFIEALNTLKGVSASIVQ 291 (363)
T ss_pred --Ccc-------------eeccCHH------HHHHHHHHH--HHHHccCcccHHHHHH-HHHHHHHHHhcCCCeEEEEec
Confidence 000 0112332 234555555 3333344444444443 46689999999844887631
Q ss_pred --C--CcC--eEEEecC--C--HHHHHHHHHHcC--Ceeee--ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 361 --P--FFD--TVKVKCA--D--AHAIASAAYKIE--MNLRV--VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 361 --~--~~~--~~~i~~~--~--~~~v~~~L~~~G--I~~~~--~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. .++ .++++.. + +.++.++|+++| |..+. ...+.+++++.. ++++|++.++++|..
T Consensus 292 ~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 292 DEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIRE 361 (363)
T ss_pred CCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHH
Confidence 1 112 3555542 3 789999999877 56654 246889999885 559999999999963
No 157
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=1.6e-15 Score=176.74 Aligned_cols=338 Identities=14% Similarity=0.167 Sum_probs=214.6
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
.+|++.+.+..++..+. ....+.....+. .+...++.+.|+++++-+ ...++.++|+.++++++..+|.|
T Consensus 67 ~lGh~~p~v~~Ai~~ql-~~~~~~~~~~~~--------~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~ 137 (453)
T PRK06943 67 LFGHANPRINAALKDQL-DTLEHAMLAGCT--------HEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHA 137 (453)
T ss_pred cCCCCCHHHHHHHHHHH-HhcCCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHH
Confidence 56777777666666553 211111100011 123457888899988643 23466889999999898888887
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC-C-----------CCCHHHHHHHHHh
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-G-----------NINIEELRKAAEA 614 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~-g-----------~~D~e~L~~~i~~ 614 (946)
...+|.++|.+|| ...++||....+..+.|- .+..++.... + .-|++++++.+++
T Consensus 138 ~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 217 (453)
T PRK06943 138 WRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE 217 (453)
T ss_pred HHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 6556655567777 567899988766554432 1333443211 1 1246888888876
Q ss_pred cCCCeEEEEEeC-C-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCc
Q 002263 615 NRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHK 681 (946)
Q Consensus 615 ~~~~t~~vvvt~-P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK 681 (946)
+.+++++|+++. . +..|++.+ .++++.++|++||+++|+|.+ +.|+.+.|.+ | +|++++ .|
T Consensus 218 ~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV----~TG~GRtG~~fa~~~~gv~PDivt~--gK 291 (453)
T PRK06943 218 RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEI----AVGCGRTGTFFACEQAGVWPDFLCL--SK 291 (453)
T ss_pred CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeech----hhCCCCCcchhHHHhCCCCCCeEee--eh
Confidence 668899999986 2 45677643 599999999999999999986 5677777653 3 799987 48
Q ss_pred ccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHH
Q 002263 682 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 761 (946)
Q Consensus 682 ~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~ 761 (946)
.++ +|--.+|.+++++++.+.+..... ...... .+.+.|+.+.++++.+.|..+-++++-+.
T Consensus 292 gl~----gG~~Pi~av~~~~ei~~~~~~~~~-----------~~~~~~-~~T~~gnpl~~aaa~a~L~~i~~~~l~~~-- 353 (453)
T PRK06943 292 GIS----GGYLPLSLVLSRDAIFAAFYDDDV-----------TRGFLH-SHSYTGNPLACRAALATLDLFAEDDVLAR-- 353 (453)
T ss_pred hhc----cCcccceEEEEcHHHHHhhcccCc-----------cCCccC-CCCCCCCHHHHHHHHHHHHHHHhcCHHHH--
Confidence 774 332347778888777654421100 000001 11244677788888999999987765543
Q ss_pred HHHHHHHHHHHHHhcc--CC-ee-eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 002263 762 IAILNANYMAKRLEKH--YP-IL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 837 (946)
Q Consensus 762 ~~~~~a~~l~~~L~~~--~~-v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~ 837 (946)
.....++|.++|++. +. +. ..|. |.. +.+.+..-..........+.+++.++|+.+... .+.++++|
T Consensus 354 -~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~---~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~----g~~l~~~P 424 (453)
T PRK06943 354 -NARKSARLRAALAPLAAHPQVRHLRQR-GTI---FAFDVALDGDAARTFSRRFFEAALERELLLRPI----GTTVYLMP 424 (453)
T ss_pred -HHHHHHHHHHHHHHHhcCCCEEeEecc-ccE---EEEEEccCCCcchHHHHHHHHHHHHCCcEEEec----CCEEEEeC
Confidence 335677888888764 22 21 2221 322 122221000000011457888899999987432 36799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 002263 838 TESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 838 t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+..+|++|||+++++|.++++++
T Consensus 425 pl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 425 PYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876
No 158
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=5.3e-16 Score=179.83 Aligned_cols=277 Identities=14% Similarity=0.140 Sum_probs=179.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
.|..+...++++.+|+++|.+. ..++.+|+.+.++++.++.. ..+++.|+++...|.++...++ ..|.+++.+
T Consensus 87 ~~~~~~~~~Le~~la~~~g~~~--~i~~~sG~~a~~~~i~~l~~-~~~g~~vi~~~~~h~s~~~~~~----~~g~~~~~~ 159 (410)
T PRK13392 87 SGTSHPHVLLERELADLHGKES--ALLFTSGYVSNDAALSTLGK-LLPGCVILSDALNHASMIEGIR----RSGAEKQVF 159 (410)
T ss_pred ccChHHHHHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHHhc-CCCCCEEEEehhhhHHHHHHHH----HcCCeEEEE
Confidence 3455556788999999999753 56777777666665543321 1267888888889999887653 346666655
Q ss_pred cc---ccccc-c----CCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC---------Ccc
Q 002263 175 DL---KDIDY-K----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG---------ELG 236 (946)
Q Consensus 175 ~~---~~l~~-i----~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~---------~~G 236 (946)
+. +++++ + +++|++|++.+| |.+|.+.|+++|.++|+++|++++|| +.++++.+.+.+ .-.
T Consensus 160 ~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~ 238 (410)
T PRK13392 160 RHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVD-EVHAVGLYGARGGGIAERDGLMDR 238 (410)
T ss_pred eCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEE-CCccccCcCCCCCchhhhccCCCC
Confidence 43 23333 2 357899999998 67999999999999999999999994 344444332111 114
Q ss_pred ceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 237 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 237 aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
+|+++++. |.|+.+ | ||+..++++++.+... .+.|.+ |+.. ++....
T Consensus 239 ~div~~tlsK~~g~~------G-G~~~~~~~~~~~l~~~----------~~~~~~--------------s~~~-~~~~~~ 286 (410)
T PRK13392 239 IDMIQGTLAKAFGCL------G-GYIAASADLIDFVRSF----------APGFIF--------------TTAL-PPAVAA 286 (410)
T ss_pred CcEEEEEChHhhhcc------c-chhhcCHHHHHHHHHh----------Ccchhc--------------cCcC-CHHHHH
Confidence 68888887 888643 3 6887777766543100 000100 0111 011222
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHH-HcCCeeeeec
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVVD 391 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~-~~GI~~~~~~ 391 (946)
+..+++ ..+... ....++..++.+++++.|+++| +++... ..+.+.+..+. +.++.++|. ++||.++...
T Consensus 287 a~~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~ 360 (410)
T PRK13392 287 GATAAI--RHLKTS--QTERDAHQDRVAALKAKLNANG-IPVMPS-PSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPIN 360 (410)
T ss_pred HHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeC
Confidence 333343 222222 2344667888899999999987 876532 12223333332 568999886 6799987531
Q ss_pred -------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 -------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 -------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...+|++++..+|++|+++++++|..
T Consensus 361 ~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 361 YPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 25799999999999999999999963
No 159
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.73 E-value=7.5e-16 Score=178.15 Aligned_cols=282 Identities=13% Similarity=0.121 Sum_probs=176.3
Q ss_pred hhhhHHHHHHHHHH----HHHHHhCCCCcceE-EcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHH-HHHHHH-hh-
Q 002263 93 IAQGRLESLLNFQT----MIADLTGLPMSNAS-LLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQT-IDICIT-RA- 164 (946)
Q Consensus 93 ~sqg~l~~l~e~q~----~la~L~g~~~~~~s-l~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~-~~~~~~-~a- 164 (946)
...| .+.+.++++ .+++++|.+. +. .+++||+|..+++.++ .. +||+|++++..|.+. ...++. ..
T Consensus 65 ~~~G-~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~al-~~--~GD~Vl~~~~~~~~~~~~g~~~~~~~ 138 (416)
T PRK13034 65 YYGG-CEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLAL-LK--PGDTILGMSLSHGGHLTHGAKVSLSG 138 (416)
T ss_pred ccCC-ChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHHh-cC--CCCEEEEcCccceeeeecCCcceecc
Confidence 3345 366777777 9999999885 43 3578999999888776 33 899999999999773 222110 00
Q ss_pred -----cCCCeEE--EEeccccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC---C
Q 002263 165 -----DGFDIKV--VVSDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---P 232 (946)
Q Consensus 165 -----~~~gi~v--~~~~~~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~---~ 232 (946)
..++++. ..+|++++++ +. .++++|++..+ .+|...|+++|.++||++|++++||+ .+++|.... +
T Consensus 139 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~-~~g~~~dl~~l~~la~~~g~~livD~-Aha~G~~~~g~~~ 216 (416)
T PRK13034 139 KWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS-AYPRELDFARFREIADEVGALLMVDM-AHIAGLVAAGEHP 216 (416)
T ss_pred ceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC-ccccccCHHHHHHHHHHcCCEEEEeC-cccccCcccCCCC
Confidence 0111111 1155667766 53 35777776554 46888899999999999999999942 334444321 1
Q ss_pred CC-ccceEEEecc-ccccccCCCCCCceEEEEEchh-hhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCcc
Q 002263 233 GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 309 (946)
Q Consensus 233 ~~-~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~ 309 (946)
+. .++|++++++ |+|++| ..|+++++++ +..++... +. . .++ ++++
T Consensus 217 ~~~~~~Di~~~s~~K~l~g~------~GG~v~~~~~~~~~~~~~~-~~--------~----~~~----------~~~~-- 265 (416)
T PRK13034 217 NPFPHAHVVTTTTHKTLRGP------RGGMILTNDEEIAKKINSA-VF--------P----GLQ----------GGPL-- 265 (416)
T ss_pred CCCCCceEEEEeCcccCCCC------CCeEEEECcHHHHHHHHhh-cC--------C----ccc----------CCcc--
Confidence 11 2599999998 777543 3466666553 32222100 00 0 000 0011
Q ss_pred chHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeE--EEecCC--HHHHHHHHHHcC
Q 002263 310 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTV--KVKCAD--AHAIASAAYKIE 384 (946)
Q Consensus 310 t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~--~i~~~~--~~~v~~~L~~~G 384 (946)
+....+...++ ...+ ..+..+..+++++++++|+++|+++| +++... ...+.+ .+...+ ...+.++|.++|
T Consensus 266 -~~~~aa~~~al-~~~~-~~~~~~~~~~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~G 341 (416)
T PRK13034 266 -MHVIAAKAVAF-GEAL-QPEFKTYAKQVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAG 341 (416)
T ss_pred -HHHHHHHHHHH-HHHh-ChhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCC
Confidence 01122221111 1222 23445677999999999999999997 988642 223333 344333 567779999999
Q ss_pred Ceeeee----------cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 002263 385 MNLRVV----------DSNTVTASFDE----TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 385 I~~~~~----------~~~~lris~~~----~~t~edid~ll~~l~~ 417 (946)
|.+... .+..+|+++++ .++++|+++++++|..
T Consensus 342 I~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~ 388 (416)
T PRK13034 342 ITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD 388 (416)
T ss_pred cEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence 988641 24579999999 6669999999999963
No 160
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.73 E-value=8.3e-16 Score=178.07 Aligned_cols=276 Identities=15% Similarity=0.179 Sum_probs=180.3
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHh-ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~-~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
.|..+...++++.+|+++|.+. +.++.+|+.+.++++..+ +.. +++.|+.+...|.+....++. .++++..
T Consensus 87 ~g~~~~~~~l~~~la~~~g~~~--~~~~~sG~~an~~ai~~l~~~~--~~~~i~~~~~~h~s~~~~~~~----~~~~~~~ 158 (407)
T PRK09064 87 SGTNHYHVELERELADLHGKEA--ALVFTSGYVSNDATLSTLAKLI--PDCVIFSDELNHASMIEGIRR----SRCEKHI 158 (407)
T ss_pred ccCHHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHHhCCC--CCCEEEEeCcchHHHHHHHHH----cCCcEEE
Confidence 3556677889999999999643 566777876666554432 222 566677777889998887753 3444444
Q ss_pred e---ccccccc-cC----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC-----C----c
Q 002263 174 S---DLKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----E----L 235 (946)
Q Consensus 174 ~---~~~~l~~-i~----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~-----~----~ 235 (946)
+ |++++++ ++ +++++|++.++ |.+|.+.|+++|.++|+++|++++|| +.+++|.+.+.+ . .
T Consensus 159 ~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livD-Ea~~~G~~g~~g~g~~~~~~~~~ 237 (407)
T PRK09064 159 FRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLD-EVHAVGMYGPRGGGIAERDGLMD 237 (407)
T ss_pred ECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEE-CCCcccccCCCCCChHHhcCCCC
Confidence 4 3456655 42 56888998887 67999999999999999999999994 344444332211 1 1
Q ss_pred cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 236 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 236 GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
..|+++++. |.||.+ | ||++.++++++.+... .+.|.+ |... ++...
T Consensus 238 ~~div~~t~sKa~g~~---G----G~~~~~~~~~~~l~~~----------~~~~~~--------------t~~~-~~~~~ 285 (407)
T PRK09064 238 RIDIIEGTLAKAFGVM---G----GYIAGSAALVDAVRSY----------APGFIF--------------TTSL-PPAIA 285 (407)
T ss_pred CCeEEEEecchhhhcc---C----ceEecCHHHHHHHHHh----------Cccccc--------------cCcC-CHHHH
Confidence 358998887 888632 2 6888888776654100 000110 0001 11122
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHH-cCCeeeee
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV 390 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~-~GI~~~~~ 390 (946)
.+..+++ .++... +...+++.++.+++++.|+++| ++++... .+.+.+.+++ +.++.++|.+ +||.++..
T Consensus 286 ~aa~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~ 359 (407)
T PRK09064 286 AAALASI--RHLKES--NEERERHQERAAKLKAALDAAG-IPVMPNE-SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPI 359 (407)
T ss_pred HHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeE
Confidence 2333333 344333 3346778889999999999988 8766421 2223444433 6789998875 59998653
Q ss_pred c-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 D-------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ~-------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. .+.+|+|++.++|++|+++++++|..
T Consensus 360 ~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 360 NYPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred CCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 1 25799999999999999999999974
No 161
>PLN02263 serine decarboxylase
Probab=99.73 E-value=2.9e-15 Score=171.33 Aligned_cols=332 Identities=15% Similarity=0.092 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHhcCCcceeecCCCCCCCCC-cHHHH---HHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC
Q 002263 39 SQMIEHMQKLASMNKVYKSFIGMGYYNTHV-PPVIL---RNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 114 (946)
Q Consensus 39 ~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~-p~~i~---~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~ 114 (946)
.++++.|.+.-..+... |+|- .++.-. +..+. ...+.|.++-..+.||+ -++.+.-.+.-+++++|+|+
T Consensus 76 ~~~l~~~~~~~~~~~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~----~~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 76 ASVLARYRKTLVERTKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYG----VHSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHhcccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcc----hhHHHHHHHHHHHHHHHhCC
Confidence 45667776665555433 4443 222223 33332 22233444333334443 13455666777899999999
Q ss_pred CCc--ceEEcccHHHHHHHHHHHhcccc--CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-
Q 002263 115 PMS--NASLLDEGTAAAEAMAMCNNIQK--GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 181 (946)
Q Consensus 115 ~~~--~~sl~~~~Ta~~ea~~la~~~~~--~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~- 181 (946)
+.. ...+++||| |++++|+...| .+...+++|+..|.|+.+.++. +|++++.++. ++|++
T Consensus 149 p~~~~~G~vtsGGT---EaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~l----lgi~~~~Vp~d~~g~mD~~aL~~a 221 (470)
T PLN02263 149 EKNEYWGYITNCGT---EGNLHGILVGREVFPDGILYASRESHYSVFKAARM----YRMECVKVDTLVSGEIDCADFKAK 221 (470)
T ss_pred CCCCCeEEEeCcHH---HHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHh----cCCcceEeccCCCCcCcHHHHHHH
Confidence 753 467888888 55544433222 1345788999999999988653 5777777765 34555
Q ss_pred cCCC---EeEEEEEcCC-CceeecchHHHHHHHHhCCc-----EEEEEecCccccC--CCC----CCCccceEEEecc-c
Q 002263 182 KSGD---VCGVLVQYPG-TEGEVLDYGDFIKNAHANGV-----KVVMATDLLALTI--LKP----PGELGADIVVGSA-Q 245 (946)
Q Consensus 182 i~~~---t~~v~v~~pn-~~G~i~di~~i~~~a~~~ga-----l~~v~a~~~al~~--l~~----~~~~GaDi~v~s~-k 245 (946)
|..+ ...|+.+.++ .+|.++||++|+++|+++|+ +++|++.+-+... +.. ....++|-+..++ |
T Consensus 222 I~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK 301 (470)
T PLN02263 222 LLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHK 301 (470)
T ss_pred HHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCcc
Confidence 5333 4566677774 69999999999999999997 9999653322211 111 1223489999999 6
Q ss_pred cccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH
Q 002263 246 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 325 (946)
Q Consensus 246 ~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~ 325 (946)
+++.|++ .|++.+|++..+.+... ..|-- .++..+ .+|-+. ...+.+.++ +..
T Consensus 302 ~l~~P~~-----cgvll~R~~~~~~~~~~-----------~~Yl~---~~d~ti---~gSR~g---~~al~lW~~--L~~ 354 (470)
T PLN02263 302 FVGCPMP-----CGVQITRMEHINVLSSN-----------VEYLA---SRDATI---MGSRNG---HAPIFLWYT--LNR 354 (470)
T ss_pred ccCCCcC-----EEEEEEehhhHhhhccC-----------hHhhC---CCCCCc---CCCCCc---HHHHHHHHH--HHH
Confidence 6677864 67888887665433110 01100 000000 111111 111122222 589
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeeecCCeEEEEeccCCCH
Q 002263 326 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTL 405 (946)
Q Consensus 326 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~ 405 (946)
+|.+|++++.+++.++|+++.++|+++| +.++..+...+|+|..+... ...+|+.+... +..++++++...+.
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p~s~~V~f~~p~~~-----~~~~gW~L~~~-~~~~Hivvmphv~~ 427 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNELSSTVVFERPKDE-----EFVRRWQLACQ-GNIAHVVVMPSVTI 427 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCceEEEEecCchH-----HhhcceEEccC-CCcEEEEEcCCCCH
Confidence 9999999999999999999999999998 77765566667888755321 23578988763 45799999999999
Q ss_pred HHHHHHHHHHhCC
Q 002263 406 EDVDKLFIVFAGG 418 (946)
Q Consensus 406 edid~ll~~l~~~ 418 (946)
+.+|+|++.|...
T Consensus 428 ~~id~fi~DL~~~ 440 (470)
T PLN02263 428 EKLDYFLKELVEK 440 (470)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999854
No 162
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=6.6e-16 Score=178.73 Aligned_cols=294 Identities=16% Similarity=0.198 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC
Q 002263 519 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 598 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~ 598 (946)
.+...++++.+++++|.+.+ +..++|++++.+++.++. +. .+++.|+.....|++....+...|.+++.++.
T Consensus 89 ~~~~~~le~~la~~~g~~~~-~~~~SG~~An~~ai~~l~-----~~-~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~- 160 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAA-LLFTSGYVSNWAALSTLG-----SR-LPGCVILSDELNHASMIEGIRHSRAEKRIFRH- 160 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcE-EEeCCcHHHHHHHHHHhh-----cC-CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-
Confidence 34567889999999997644 566677766655544321 11 13466777778898888888888998888875
Q ss_pred CCCCCCHHHHHHHHHhcC-CCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccc-cc-----CCC-c
Q 002263 599 AKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LT-----SPG-Y 669 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g-l~-----~pg-~ 669 (946)
.|++++++.++... +++++|+++++ |.+|.+. |+++|.++|+++|+++++|++|..++.| .. .++ .
T Consensus 161 ----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~ 235 (406)
T PRK13393 161 ----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA-PIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA 235 (406)
T ss_pred ----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC
Confidence 48889988886542 36788888888 4689998 7999999999999999999997533311 10 011 1
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
...|+++.++.|.|+. +| |++++++++.+.+.... +... .+++ ++...++++.+.+.
T Consensus 236 ~~~~i~~~tlsKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~~---~t~~--~~p~~~aa~~aaL~ 292 (406)
T PRK13393 236 DRLTIIEGTLAKAFGV------MG-GYITGSAALCDFIRSFA-----------SGFI---FTTS--LPPAVAAGALASVR 292 (406)
T ss_pred CCCeEEEEeCchhhcc------cC-ceeeCCHHHHHHHHHhC-----------cCce---ecCc--cCHHHHHHHHHHHH
Confidence 1257887788898853 22 67776666554432100 0000 0110 12222334445555
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-CCcccCCCCC
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSW 827 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~Gi~~~~~~~ 827 (946)
.+-..+.. .++...+++++.++|++. +++. ++ .+++. .+.+.. ..+..++.++|.+ +||.+....+
T Consensus 293 ~~~~~~~~--~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~i~---~v~~~~-----~~~~~~l~~~L~~~~Gi~v~~~~~ 360 (406)
T PRK13393 293 HLKASSAE--RERHQDRVARLRARLDKAGIPHL-PN-PSHIV---PVMVGD-----PVLCKQISDELLDRYGIYVQPINY 360 (406)
T ss_pred HHhhCHHH--HHHHHHHHHHHHHHHHHcCCCcC-CC-CCCeE---EEEeCC-----HHHHHHHHHHHHHhCCEEEEeECC
Confidence 55333322 234457788999999874 4432 22 23321 222210 1245789999987 5999865544
Q ss_pred C-C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 828 P-V---PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 828 p-~---~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
| + .+.+||+++..+|++|+|+++++|++++++.
T Consensus 361 p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 361 PTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 4 2 2679999999999999999999999987664
No 163
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.73 E-value=5.2e-16 Score=179.74 Aligned_cols=293 Identities=17% Similarity=0.194 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC
Q 002263 518 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 597 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~ 597 (946)
..+...++++.+++++|.+. .+..++|++++.+++.+++.+ .+++.|+.....|++....+...|.++..++.
T Consensus 89 ~~~~~~~l~~~la~~~g~~~-~~~~~sG~~an~~ai~~l~~~------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~ 161 (407)
T PRK09064 89 TNHYHVELERELADLHGKEA-ALVFTSGYVSNDATLSTLAKL------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH 161 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHHHHHHHhCC------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC
Confidence 34556789999999999654 356677877665554443311 13454555555576666667778888877765
Q ss_pred CCCCCCCHHHHHHHHHhcC-CCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC-------
Q 002263 598 DAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------- 668 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg------- 668 (946)
.|+++|+++++... +++++|++++| |..|.+. ++++|.++|+++|+++++|++|..+. +.+.|
T Consensus 162 -----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~-~l~~i~~l~~~~~~~livDEa~~~G~--~g~~g~g~~~~~ 233 (407)
T PRK09064 162 -----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA-PIAEICDLADKYNALTYLDEVHAVGM--YGPRGGGIAERD 233 (407)
T ss_pred -----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc-CHHHHHHHHHHcCCEEEEECCCcccc--cCCCCCChHHhc
Confidence 48899999987543 46889999998 4689888 79999999999999999999985332 11111
Q ss_pred -c-cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 669 -Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 669 -~-~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
. ...|+++.+++|+|+. +| |++++++++.+.+.... ... ..+++ .+...++++.+
T Consensus 234 ~~~~~~div~~t~sKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~---~~t~~--~~~~~~~aa~~ 290 (407)
T PRK09064 234 GLMDRIDIIEGTLAKAFGV------MG-GYIAGSAALVDAVRSYA-----------PGF---IFTTS--LPPAIAAAALA 290 (407)
T ss_pred CCCCCCeEEEEecchhhhc------cC-ceEecCHHHHHHHHHhC-----------ccc---cccCc--CCHHHHHHHHH
Confidence 1 1358888889999853 22 67777766554431100 000 00100 11222333445
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-CCcccCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPT 824 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~Gi~~~~ 824 (946)
.+..+...+ ...++...+++++.++|++. +++. ++.+++ +.+.+.. ...+.++.++|.+ +||.+..
T Consensus 291 al~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---v~i~~~~-----~~~~~~l~~~L~~~~gi~v~~ 358 (407)
T PRK09064 291 SIRHLKESN--EERERHQERAAKLKAALDAAGIPVM--PNESHI---VPVMVGD-----PEKCKKASDMLLEEHGIYVQP 358 (407)
T ss_pred HHHHHhcCH--HHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHhCCEEEee
Confidence 555554432 23355667889999999874 5442 112222 2233221 1246789999875 6999865
Q ss_pred CCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 825 MSWP-VP---GTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 825 ~~~p-~~---~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..+| ++ +.+||+++..+|++|+|+++++|+++++++
T Consensus 359 ~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 359 INYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred ECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 5544 22 579999999999999999999999987653
No 164
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.73 E-value=6.6e-16 Score=178.14 Aligned_cols=297 Identities=18% Similarity=0.232 Sum_probs=193.7
Q ss_pred cccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 594 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~ 594 (946)
.+|..++..++++++++++|.+. .+..++|+++..+++ +.+. +++++|++++..|+++...+.+.|.+++.
T Consensus 82 ~~G~~~l~~~l~~~la~~~g~~~-~i~~tsG~~a~~~~~---~~l~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~~~ 152 (397)
T PRK06939 82 ICGTQDLHKELEEKLAKFLGTED-AILYSSCFDANGGLF---ETLL-----GKEDAIISDALNHASIIDGVRLCKAKRYR 152 (397)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEEcChHHHHHHHH---HHhC-----CCCCEEEEEhhhhHHHHHHHHhcCCceEE
Confidence 46777888899999999999763 355666766654433 3321 25689999999888887778899999888
Q ss_pred EcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-C--C
Q 002263 595 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S--P 667 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~--p 667 (946)
++. .|+++++++++++ ..++++|+.... |.+|..+ ++++|.++|+++|+++++|+++..+..+.. . +
T Consensus 153 ~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~-~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~ 226 (397)
T PRK06939 153 YAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA-PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTV 226 (397)
T ss_pred eCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHH
Confidence 875 5899999998642 226777776543 4578887 799999999999999999998732221110 0 0
Q ss_pred ---C-ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 668 ---G-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 668 ---g-~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
+ ..+.|+++.++||+|+ |+.+|++++++++.+.+.... .....+ ++ . ....+.+
T Consensus 227 ~~~~~~~~~~i~~~S~sK~~~------g~r~G~v~~~~~~~~~l~~~~-----------~~~~~~--~~-~--~~~~~~a 284 (397)
T PRK06939 227 EHFGVMDRVDIITGTLGKALG------GASGGYTAGRKEVIDWLRQRS-----------RPYLFS--NS-L--APAIVAA 284 (397)
T ss_pred HHcCCCCCCcEEEEECHHHhC------ccCceEEEeCHHHHHHHHHhC-----------cccccc--CC-C--CHHHHHH
Confidence 1 1256899999999983 346689988876655432100 000000 11 0 1111222
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
+.+.+..+. + ..+..++...+.+++.+.|++. +.+. .+ .+.+ +.+.+. .+.+..+++++|.++||.+
T Consensus 285 ~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~-~~~~---~~~~~~-----~~~~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 285 SIKVLELLE-E-SDELRDRLWENARYFREGMTAAGFTLG-PG-EHPI---IPVMLG-----DAKLAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHcCCCcC-CC-CCCE---EEEEEC-----CHHHHHHHHHHHHHCCceE
Confidence 333344432 2 1344556667888999999874 4332 11 1222 222222 1234678999999999986
Q ss_pred CCCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 823 PTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 823 ~~~~~p~----~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
....||. .+.+|++++..++++||+++++.|++++++.
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 5433432 3579999998889999999999999887653
No 165
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.72 E-value=2.2e-15 Score=174.20 Aligned_cols=286 Identities=19% Similarity=0.223 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHh-cCCC-CCCEEE-EcCCCCCCCHHHHHHcC--------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCI-IPVSAHGTNPATAAMCG-------- 589 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~-~G~~-~~~~Il-i~~saHg~~~~~a~~~G-------- 589 (946)
...++++.+++++|.+.+ +..++|++++++++.++|.|+.. +|.+ +|++|+ ...+.||+........+
T Consensus 84 ~~~~l~~~l~~~~~~~~~-~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~ 162 (401)
T PRK00854 84 QLAPLYEELAALTGSHKV-LPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF 162 (401)
T ss_pred HHHHHHHHHHhhCCCCEE-EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC
Confidence 456788999999987643 66789999998888888877432 2322 245555 56788998765543211
Q ss_pred ----CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEeccccccc
Q 002263 590 ----MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 590 ----~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~ 661 (946)
..+..++. .|+++|++++. +++++|++++| |.+|.+.+ ++++|+++|++||+++++|+++.
T Consensus 163 ~~~~~~~~~~~~-----~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~--- 231 (401)
T PRK00854 163 GPFTPGFRVVPF-----GDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT--- 231 (401)
T ss_pred CCCCCCeEEeCC-----CCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh---
Confidence 12344443 48999999996 78999999998 46888763 29999999999999999999864
Q ss_pred ccccCCC--------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 662 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 662 ~gl~~pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
|+.+.| ...+|+++++ |+|+ +|...+|.+++++++...+.... ....++.
T Consensus 232 -g~g~~g~~~~~~~~g~~~D~~~~~--K~l~----gg~~~ig~v~~~~~~~~~l~~~~--------------~~~t~~~- 289 (401)
T PRK00854 232 -GLGRTGKLLAEEHEGIEADVTLIG--KALS----GGFYPVSAVLSNSEVLGVLKPGQ--------------HGSTFGG- 289 (401)
T ss_pred -CCCCCchHhHHhhcCCCCCEEEec--cccc----CCccCeEEEEEcHHHHhcccCCC--------------CCCCCCc-
Confidence 222221 1246988874 9884 34457889999887766543110 0011121
Q ss_pred ccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeeEEEecccccccCCCCHHH
Q 002263 734 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 810 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~ 810 (946)
+...++++.+.|..+..+++. ++...+++++.+.|++. +... ..+ .+.. +.+.+.. ...+..+
T Consensus 290 ---~~~~~aa~~a~L~~l~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~g-~g~~---~~i~~~~----~~~~~~~ 355 (401)
T PRK00854 290 ---NPLACAVARAALKVLTEEGMI---ENAAEMGAYFLEGLRSIRSNIVREVRG-RGLM---LAVELEP----EAGGARQ 355 (401)
T ss_pred ---CHHHHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHhhccCceEEEec-cceE---EEEEEec----CchhHHH
Confidence 333444555666655444443 44456778888888875 2221 111 1222 2333321 1235678
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 811 i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+++.|.++|+.+.... .+.||++|+..+|++|||++++.|++++
T Consensus 356 ~~~~L~~~GV~v~~~~---~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 356 YCEALKERGLLAKDTH---DHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred HHHHHHHCCeEEecCC---CCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 9999999999975322 4799999999999999999999998775
No 166
>PLN02483 serine palmitoyltransferase
Probab=99.72 E-value=8e-16 Score=181.04 Aligned_cols=298 Identities=15% Similarity=0.176 Sum_probs=189.9
Q ss_pred cHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 517 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
|......++++.+++++|.+.. +..++|..++.+++.++. ++++.|++++..|.+....+...|++++.++
T Consensus 143 g~~~~~~ele~~lA~~~g~~~a-i~~~~G~~an~~~i~al~--------~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~ 213 (489)
T PLN02483 143 GTTKLHRELEELVARFVGKPAA-IVFGMGYATNSTIIPALI--------GKGGLIISDSLNHNSIVNGARGSGATIRVFQ 213 (489)
T ss_pred CCcHHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEcchhhHHHHHHHHHcCCeEEEEe
Confidence 3345577899999999997654 444567655533333221 2568999999999888888999999999998
Q ss_pred CCCCCCCCHHHHHHHHHhc----CCCe-----EEEEEeCC--CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc
Q 002263 597 TDAKGNINIEELRKAAEAN----RDNL-----STLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT 665 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~----~~~t-----~~vvvt~P--n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~ 665 (946)
.+ |+++|++++++. .++| +.++++.+ |..|.+. ++++|.++|+++|+++++|.++.....|..
T Consensus 214 ~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~-~l~~I~~la~~~~~~livDEa~s~g~~G~~ 287 (489)
T PLN02483 214 HN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC-KLPEIVAVCKKYKAYVYLDEAHSIGAVGKT 287 (489)
T ss_pred CC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc-CHHHHHHHHHHcCCEEEEECcCccCccCCC
Confidence 63 678887777531 1232 55555554 4578888 799999999999999999999753221110
Q ss_pred --------CCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 666 --------SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 666 --------~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
.....+.||++.+++|+|+. +| |++++++++.+.+.....+ ...+ ...+
T Consensus 288 G~g~~~~~~v~~~~~dI~~~SfSKs~g~------~G-G~i~~~~~li~~l~~~~~~---------~~~~-~~~~------ 344 (489)
T PLN02483 288 GRGVCELLGVDPADVDIMMGTFTKSFGS------CG-GYIAGSKELIQYLKRTCPA---------HLYA-TSMS------ 344 (489)
T ss_pred CCchHHhcCCCcccCcEEEEecchhccc------Cc-eEEEcCHHHHHHHHHhCcc---------cccc-CCcC------
Confidence 00113579999999999953 22 7888887766554311000 0000 0111
Q ss_pred hhHHHHHHHHHHHH-cHh---hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 738 ALILPISYTYIAMM-GSK---GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 738 ~~~~~~a~a~l~~l-G~e---Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
...+..+.+.+..+ +.+ -..+..++..++++++.+.|++. +.+. ....++....++++ ..+..+++
T Consensus 345 p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~-~~~~sp~~~l~l~~--------~~~~~~~~ 415 (489)
T PLN02483 345 PPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVL-GDNDSPVMPIMLYN--------PAKIPAFS 415 (489)
T ss_pred HHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCccc-CCCCCCEEEEEECC--------HHHHHHHH
Confidence 11111222233322 222 12334556778899999999885 4432 11112332111111 12456899
Q ss_pred HHHHHCCcccCCCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 813 KRLMDYGFHGPTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 813 ~~L~~~Gi~~~~~~~p~----~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
++|.++||.+....||. .+.+||+++..+|++|||++++.|.++.+++.
T Consensus 416 ~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 416 RECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred HHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 99999999875555541 36899999999999999999999999876543
No 167
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.72 E-value=5.2e-16 Score=192.94 Aligned_cols=320 Identities=14% Similarity=0.141 Sum_probs=197.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCCcc--c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH---HHHc
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMC 588 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~~--~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~---a~~~ 588 (946)
++-..+.+.+.++.+++++|.+.. . +++.++++|. .+++..+. .+++++||++...|.++... ++..
T Consensus 73 s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~al---nlva~~l~----~~~gd~Iv~t~~eH~svl~~~~~a~~~ 145 (805)
T PLN02724 73 SMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAAL---KLVGETFP----WSSESHFCYTLENHNSVLGIREYALEK 145 (805)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHH---HHHHHHCC----CCCCCeEEEeeccccchHHHHHHHHHc
Confidence 334567888999999999998643 2 3333344333 33333331 12467899988888777654 3446
Q ss_pred CCEEEEEcCC--------CCCCCCH--HHHHHHHH----h---cCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc---
Q 002263 589 GMKIVSVGTD--------AKGNINI--EELRKAAE----A---NRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--- 647 (946)
Q Consensus 589 G~~vv~v~~~--------~~g~~D~--e~L~~~i~----~---~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~--- 647 (946)
|++++.++++ ..+.+|+ ++|++.++ . ..++|++|.+++- |.+|.+. |+++|.++++..
T Consensus 146 G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~-pi~~i~~~~~~~~~~ 224 (805)
T PLN02724 146 GAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKF-PLDLVKLIKDNQHSN 224 (805)
T ss_pred CCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcC-CHHHHHHHHHhcccc
Confidence 9999999886 3455554 66777642 1 1246678888886 6799998 799876555432
Q ss_pred ----C-CEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCC-cceeEEEecccCCCCCCCcccc-CC----
Q 002263 648 ----G-GQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVS-TG---- 716 (946)
Q Consensus 648 ----g-~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lp~~~v~~-~~---- 716 (946)
| ++++||+|+..+...+ ...++|+|++++|+|||| ||| |+|++++++++...+....+|. +.
T Consensus 225 ~~~~g~~~v~vDaaQ~~g~~pi-Dv~~~~~Dfl~~S~HK~~------GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~ 297 (805)
T PLN02724 225 FSKSGRWMVLLDAAKGCGTSPP-DLSRYPADFVVVSFYKIF------GYPTGLGALLVRRDAAKLLKKKYFGGGTVAASI 297 (805)
T ss_pred cccCcceEEEeehhhhcCCCCC-ChhhcCCCEEEEecceec------cCCCCceEEEEehhhhhhhcCCccCCCceEEEe
Confidence 3 5799999986544332 335689999999999998 445 7899999987665554333322 10
Q ss_pred ---CC------CCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccC------Ce-
Q 002263 717 ---GI------PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY------PI- 780 (946)
Q Consensus 717 ---d~------~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~------~v- 780 (946)
++ ...+.+.+|.++.+ ...+..|..++..+ |+.++.++...+++|+.++|+++. .+
T Consensus 298 ~~~~~~~~~~~~~~rfE~GT~n~~~-----i~~l~aal~~l~~i---g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~ 369 (805)
T PLN02724 298 ADIDFVKRRERVEQRFEDGTISFLS-----IAALRHGFKLLNRL---TISAIAMHTWALTHYVANSLRNLKHGNGAPVCV 369 (805)
T ss_pred cccceeeccccHHHHhcCCCcchhH-----HHHHHHHHHHHHHh---ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEE
Confidence 01 00112344554432 22233444455444 566777778889999999998752 13
Q ss_pred eeccCC------CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC--C------------------------
Q 002263 781 LFRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW--P------------------------ 828 (946)
Q Consensus 781 ~~~~~~------~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~--p------------------------ 828 (946)
+| |+. ......+.|.+.... ...+...++.+.+.++||.+++-.+ |
T Consensus 370 iy-g~~~~~~~~~~r~~ivsFnv~~~~-~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c 447 (805)
T PLN02724 370 LY-GNHTFKLEFHIQGPIVTFNLKRAD-GSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVC 447 (805)
T ss_pred Ec-CCCCCCCCcccccCEEEEEEEcCC-CCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCcc
Confidence 23 211 011122334433110 0113445666666678987642110 0
Q ss_pred ----------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 829 ----------VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 829 ----------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..+++|+|+..++|++|||+|+++|++..-.
T Consensus 448 ~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 448 WDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred CchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 0288999999999999999999999987544
No 168
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.72 E-value=2.1e-15 Score=170.21 Aligned_cols=304 Identities=16% Similarity=0.142 Sum_probs=196.1
Q ss_pred CCCCCCCCCcHHHHHHHHh--CCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC------CcceEEcccHHHHHHH
Q 002263 60 GMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP------MSNASLLDEGTAAAEA 131 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~--~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~------~~~~sl~~~~Ta~~ea 131 (946)
+.|.++...++.+...+.. +......|+ ..+|.. ++++.++++++.. ..++.+++++|+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~ 74 (350)
T cd00609 4 SIGEPDFPPPPEVLEALAAAALRAGLLGYY-----PDPGLP----ELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSL 74 (350)
T ss_pred CCCCCCCCCCHHHHHHHHHHhhccCCCCCC-----CCCCcH----HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 5666676766665544442 222222222 222333 3445555555544 5578888999988887
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc----------cccc-cCCCEeEEEEEcC-CCcee
Q 002263 132 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDVCGVLVQYP-GTEGE 199 (946)
Q Consensus 132 ~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~----------~l~~-i~~~t~~v~v~~p-n~~G~ 199 (946)
++.++. ++|++|++++..|+++...++ ..|++++.++.+ .++. .++++++|++++| |.+|.
T Consensus 75 ~~~~~~---~~g~~vl~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~ 147 (350)
T cd00609 75 LLRALL---NPGDEVLVPDPTYPGYEAAAR----LAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGA 147 (350)
T ss_pred HHHHhC---CCCCEEEEcCCCchhHHHHHH----HCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCc
Confidence 766653 278999999999999888764 357888777653 1223 5678999999988 67999
Q ss_pred ecchHHH---HHHHHhCCcEEEEEecCccccC---C-----CCCCCccceEEEecc-ccccccCCCCCCceEEEEEch-h
Q 002263 200 VLDYGDF---IKNAHANGVKVVMATDLLALTI---L-----KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-E 266 (946)
Q Consensus 200 i~di~~i---~~~a~~~gal~~v~a~~~al~~---l-----~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~-~ 266 (946)
+.|++++ .++||++|++++++. .++.+. . ......+.|++++|. |+|+ .+|+.+|++.+++ +
T Consensus 148 ~~~~~~l~~l~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~~ 222 (350)
T cd00609 148 VLSEEELEELAELAKKHGILIISDE-AYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPEE 222 (350)
T ss_pred ccCHHHHHHHHHHHHhCCeEEEEec-chhhceeCCcccccccCcCccCcEEEEeecccccC----CcccceEEEecCHHH
Confidence 9876555 589999999999943 112111 1 224567899999998 7775 2456789999998 6
Q ss_pred hhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Q 002263 267 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFA 346 (946)
Q Consensus 267 ~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~ 346 (946)
+.+.+.... +....++|. ....++.+++ .. ..++++++.+++.+++++++
T Consensus 223 ~~~~~~~~~------------------------~~~~~~~~~---~~~~~~~~~l--~~-~~~~~~~~~~~~~~~~~~l~ 272 (350)
T cd00609 223 LLERLKKLL------------------------PYTTSGPST---LSQAAAAAAL--DD-GEEHLEELRERYRRRRDALL 272 (350)
T ss_pred HHHHHHHHH------------------------HhcccCCCh---HHHHHHHHHH--hC-cHHHHHHHHHHHHHHHHHHH
Confidence 766652100 000111221 2222222221 21 11688999999999999999
Q ss_pred HHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 347 LGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 347 ~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.|++.+...+........+.+..++ ...+.+.|.++||.+... .+..+|++++.. ++|+++++++|+
T Consensus 273 ~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 273 EALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 99999862332222222234445443 556777888889988653 357899999988 999999999985
No 169
>PRK07678 aminotransferase; Validated
Probab=99.72 E-value=1.6e-15 Score=176.84 Aligned_cols=344 Identities=16% Similarity=0.196 Sum_probs=210.8
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
..+|++.+.+..++..+.. ...+... .+ . .+...++.+.|+++++.....++.++|+.++++++..+|.|
T Consensus 59 ~~lGh~~p~v~~ai~~q~~-~~~~~~~-~~-------~-~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~ 128 (451)
T PRK07678 59 VNVGYGRKELAEAAYEQLK-TLSYFPL-TQ-------S-HEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQY 128 (451)
T ss_pred hcCCCCCHHHHHHHHHHHH-hcCcccc-cc-------C-CHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 3567777666655555522 1111110 01 0 12345788889998865534467899999999999999998
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE------------EEEEcCCCCCC---------CC---HHHHHHHHH-
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKGN---------IN---IEELRKAAE- 613 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~------------vv~v~~~~~g~---------~D---~e~L~~~i~- 613 (946)
...+|..+|.+|| ...++||....+....|.. +..+|...... .| ++++++.++
T Consensus 129 t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (451)
T PRK07678 129 HAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW 208 (451)
T ss_pred HHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh
Confidence 7555654566776 5678999887765543321 23333221111 11 234666775
Q ss_pred hcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc------cC--CCEEEeCCCc
Q 002263 614 ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHK 681 (946)
Q Consensus 614 ~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~------~G--aDi~~~s~hK 681 (946)
.+.+++++|+++.. +..|++.+ .++++.++|++||+++|+|.+ +.||.+.|. +| +|++++ .|
T Consensus 209 ~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~~~~~~gv~PDivt~--gK 282 (451)
T PRK07678 209 ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEV----ICGFGRTGKAFGFMNYGVKPDIITM--AK 282 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh----hhcCCcCchhHHHHhcCCCCCEEEe--ec
Confidence 33578999988754 34577653 399999999999999999986 556666653 23 799987 48
Q ss_pred ccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHH
Q 002263 682 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 761 (946)
Q Consensus 682 ~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~ 761 (946)
.++ +|+-.+|.+++++++++.+..... ........ .+.|+++.++++.+.|..+-++++.+
T Consensus 283 ~lg----gG~~Pi~av~~~~~i~~~~~~~~~-----------~~~~~h~~-T~~gnp~~~aaa~a~l~~l~~~~~~~--- 343 (451)
T PRK07678 283 GIT----SAYLPLSATAVKKEIYEAFKGKGE-----------YEHFRHVN-TFGGNPAACALALKNLEIMENENLIE--- 343 (451)
T ss_pred ccc----cCCcceeEEEEcHHHHHHHhccCc-----------ccccccCC-CCCcCHHHHHHHHHHHHHHHhCCHHH---
Confidence 774 443347888888877655431100 00000111 24467778888889999887776544
Q ss_pred HHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEec-cccccc-CCCCHHHHHHHHHHCCcccCCCCC--C-CCC
Q 002263 762 IAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDL-RGLKNT-AGIEPEDVAKRLMDYGFHGPTMSW--P-VPG 831 (946)
Q Consensus 762 ~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~-~~~~~~-~g~~~~~i~~~L~~~Gi~~~~~~~--p-~~~ 831 (946)
+..++.++|.++|++. +.++ ..|. |... -+.+.- ...+.. ......++.+.|.++|+.+..... | ..+
T Consensus 344 ~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-Gl~~-~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~ 421 (451)
T PRK07678 344 RSAQLGELLLEQLKEELGEHPLVGDIRGK-GLLV-GIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNN 421 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEee-ceEE-EEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCC
Confidence 3445677888877643 2221 2221 3221 121210 100000 001246788899999998743210 1 136
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.||++|+..+|++|||+++++|.++++++
T Consensus 422 ~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 422 VLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999988764
No 170
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.72 E-value=1.1e-15 Score=175.66 Aligned_cols=295 Identities=17% Similarity=0.204 Sum_probs=190.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 594 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~ 594 (946)
.+|..++..++++++++++|.+. .+..++|+++.++ +++.+. +++++|+++...|+++...+.+.|.+++.
T Consensus 73 ~~g~~~l~~~l~~~l~~~~g~~~-~i~~~sG~~a~~~---a~~~~~-----~~gd~vi~~~~~~~~~~~~~~~~g~~~~~ 143 (385)
T TIGR01825 73 IAGTLRLHEELEEKLAKFKKTEA-ALVFQSGFNTNQG---VLSALL-----RKGDIVLSDELNHASIIDGLRLTKATKKI 143 (385)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEE
Confidence 35667788899999999999764 3556677665543 333321 25678999988888887777888988877
Q ss_pred EcCCCCCCCCHHHHHHHHHhcC-CCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccc-cc--cc---c-
Q 002263 595 VGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNA-QV--GL---T- 665 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a-~~--gl---~- 665 (946)
++ .+|++++++.+.+.. +++++|++.++ |.+|.+. ++++|+++|++||+++++|+++... +. +. .
T Consensus 144 ~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR01825 144 YK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA-PLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH 217 (385)
T ss_pred eC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh
Confidence 65 378999999887432 36888877765 5689988 7999999999999999999987422 11 10 0
Q ss_pred CCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 666 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 666 ~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
..-..+.|+++.+++|+|+. +| |++..++++.+.+.... .....+. .. ......++.
T Consensus 218 ~~~~~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~~a~~ 274 (385)
T TIGR01825 218 FGLEDKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNRA-----------RPFLFST-AQ----PPAVVAALA 274 (385)
T ss_pred cCCCcCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHhC-----------ccccccC-CC----CHHHHHHHH
Confidence 01124678888999999853 33 67777766554432100 0000000 00 112222333
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 824 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~ 824 (946)
+.+..+... .+..++...+++++.+.|++. +++. .+.+++ +.+.+.. ..+..+++++|.++||.++.
T Consensus 275 ~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~L~~~gi~v~~ 342 (385)
T TIGR01825 275 AAVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTG--GSETPI---TPVVIGD-----EKAAQEFSRRLFDEGIFAQS 342 (385)
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEECC-----HHHHHHHHHHHHHCCcEEcc
Confidence 444433221 133445556788999999874 4432 112222 2222221 12457899999999998765
Q ss_pred CCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 825 MSWPV----PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 825 ~~~p~----~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..||. .+.+|++++..++++|+++++++|++++++
T Consensus 343 ~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 343 IVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred cCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44442 267999999999999999999999988754
No 171
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.72 E-value=1.5e-15 Score=174.42 Aligned_cols=300 Identities=15% Similarity=0.151 Sum_probs=191.1
Q ss_pred cccHHHHHHHHHHHHHHhhC--CCcccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITG--FDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G--~~~~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+.+| .+...+.. ++++++. .++++.+. .++++|+++...|..+...+...|++
T Consensus 60 ~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al---~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 131 (382)
T PRK06108 60 NLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL---MLAAQALV-----GPGDEVVAVTPLWPNLVAAPKILGAR 131 (382)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH---HHHHHHhc-----CCCCEEEEeCCCccchHHHHHHCCCE
Confidence 46777888888888888888 44444444 4444443 23333321 24678999999888888888999999
Q ss_pred EEEEcCCCC---CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccccc--
Q 002263 592 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG-- 663 (946)
Q Consensus 592 vv~v~~~~~---g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~g-- 663 (946)
++.+|.+.+ +.+|+++|+++++ +++++|++++| |.+|.+- .++++|+++|+++|+++++|.++.....+
T Consensus 132 ~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 208 (382)
T PRK06108 132 VVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG 208 (382)
T ss_pred EEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC
Confidence 999998643 4699999999986 67889999999 5788764 25899999999999999999886421111
Q ss_pred ccCCC--c----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 664 LTSPG--Y----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 664 l~~pg--~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
-..+. . ..-.+++.+++|+|+. .|.++|++.+++++...+.... ... ..+.+
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~RiG~~~~~~~~~~~~~~~~------------~~~--~~~~~---- 266 (382)
T PRK06108 209 GRAPSFLDIAEPDDRIIFVNSFSKNWAM----TGWRLGWLVAPPALGQVLEKLI------------EYN--TSCVA---- 266 (382)
T ss_pred CCCCCHhhcCCCcCCEEEEeechhhccC----cccceeeeeCCHHHHHHHHHHH------------Hhc--ccCCC----
Confidence 00010 0 1224677889998853 3678999999876655432100 000 11111
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 816 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~- 816 (946)
.....++...+ ..+.+.+++..++...+.+++.+.|++...+.+..+++..+ ++++++. ..+..+++++|.
T Consensus 267 ~~~q~a~~~~l-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~--~~~~l~~-----~~~~~~~~~~ll~ 338 (382)
T PRK06108 267 QFVQRAAVAAL-DEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMY--AFFRIPG-----VTDSLALAKRLVD 338 (382)
T ss_pred hHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEE--EEEeCCC-----CCCHHHHHHHHHH
Confidence 11111222222 22344456666666777888888887642222212222221 3455542 246788999886
Q ss_pred HCCccc-CCCCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 817 DYGFHG-PTMSW-P-VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 817 ~~Gi~~-~~~~~-p-~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
++|+.+ +...| + ..+++|++++. +.+++++.++.|++++
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 579986 33223 2 25789999986 7888888888887764
No 172
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.72 E-value=8.9e-16 Score=176.27 Aligned_cols=291 Identities=15% Similarity=0.146 Sum_probs=186.0
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
+|......++++++++++|.+. .+.+++|+++.++ +++.+. +++++|+++...|+.+...+.+.|++++.+
T Consensus 80 ~g~~~~~~~l~~~la~~~~~~~-~i~~~~g~~~~~~---~l~~~~-----~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~ 150 (385)
T PRK05958 80 TGNSPAHEALEEELAEWFGAER-ALLFSSGYAANLA---VLTALA-----GKGDLIVSDKLNHASLIDGARLSRARVRRY 150 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHhC-----CCCCEEEEeCccCHHHHHHHHhcCCceEEe
Confidence 3444567789999999999653 3555667654433 333331 256899999998988888888999999988
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc---cC-----
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TS----- 666 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl---~~----- 666 (946)
+. .|+++++++++..+++++++++..+ |.+|... ++++|+++|+++|+++++|+++.....+. ..
T Consensus 151 ~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~-~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~ 224 (385)
T PRK05958 151 PH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLA-PLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAG 224 (385)
T ss_pred CC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC-CHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhC
Confidence 76 4899999999743234666666555 4578887 79999999999999999999874322110 00
Q ss_pred CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 667 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 667 pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
.....-++++.++||+|+. +| |++..++++.+.+.... +....+. .. +...++++.+
T Consensus 225 ~~~~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~aa~~a 281 (385)
T PRK05958 225 LAGEPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINRA-----------RPFIFTT-AL----PPAQAAAARA 281 (385)
T ss_pred CCCCCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHhC-----------ccceecC-CC----CHHHHHHHHH
Confidence 0011234777889999852 23 67777766544321000 0000000 01 1222333444
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
.+..+... .+..++...+.+++.+.|++. +++. + +.+.+ +.+.++. ..+..++.++|.++||.+...
T Consensus 282 al~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~-~-~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 282 ALRILRRE--PERRERLAALIARLRAGLRALGFQLM-D-SQSAI---QPLIVGD-----NERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC-C-CCCCE---EEEEeCC-----HHHHHHHHHHHHHCCceEecc
Confidence 44444322 345566777888999999874 4432 1 12322 3344331 235678999999999997543
Q ss_pred CCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 826 SWP----VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 826 ~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
..+ ..+.+||++...++++|+|++++.|+++
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 222 1368999999888999999999999875
No 173
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.71 E-value=2.3e-15 Score=172.80 Aligned_cols=297 Identities=15% Similarity=0.213 Sum_probs=186.0
Q ss_pred HHHHHHHHHHhhCCCcccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 599 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~- 599 (946)
..++++++++++|.+...+.. ++++++. .++++.+. .++++|++++..+..+...++..|.+++.++++.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~al---~~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 139 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATESL---YLVMRAFL-----SPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSE 139 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHHHH---HHHHHHhc-----CCCCEEEEcCCCCcchHHHHHHhCceEEeeccccc
Confidence 446788999999987654444 4444443 33344321 2457899998877777777889999999999743
Q ss_pred --CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEecccccccccccCCCcc--CC
Q 002263 600 --KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--GA 672 (946)
Q Consensus 600 --~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--Ga 672 (946)
++.+|+++++++++ ++++++++++|+ .+|.+- +++++|+++|+++|+++++|+++..-..+....... ..
T Consensus 140 ~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 216 (380)
T PRK06225 140 ECNYKLTPELVKENMD---ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEH 216 (380)
T ss_pred cCCccCCHHHHHhhcC---CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCC
Confidence 35799999999986 688899989994 688864 269999999999999999998752100111111111 23
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
.+++.+++|+|+. .|.++|++++++++.+.+.... ....+.+ .....++.+.+...
T Consensus 217 ~i~~~s~SK~~g~----~G~RiG~i~~~~~l~~~~~~~~---------------~~~~~~~----~~~~~~a~~~l~~~- 272 (380)
T PRK06225 217 TVTSYSFSKIFGM----AGLRIGAVVATPDLIEVVKSIV---------------INDLGTN----VIAQEAAIAGLKVK- 272 (380)
T ss_pred EEEEeechhhcCC----ccceeEEEecCHHHHHHHHHHH---------------hcccCCC----HHHHHHHHHHHhcc-
Confidence 4666788898853 3577899999877665432110 0011111 11111222222221
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-C-C
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-P 828 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~-p 828 (946)
.+-+++..+....+.+++.+.|+++ ..+......+ .+ ++++++. .+.+..+++++|.++||.+.... + +
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-~~--~~~~~~~----~~~~~~~l~~~l~~~gi~v~~g~~~~~ 345 (380)
T PRK06225 273 DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHG-NM--MVIDISE----AGIDPEDLVEYLLERKIFVRQGTYTSK 345 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCC-eE--EEEEccc----ccCCHHHHHHHHHHCCEEEcCCcccCc
Confidence 1212333333334566777777763 2221111122 22 4555542 24578899999999999864322 1 1
Q ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 829 --VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 829 --~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+.+|+++. .++++++++++.|++++++++.
T Consensus 346 ~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 346 RFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 1368999985 4689999999999999988764
No 174
>PRK05965 hypothetical protein; Provisional
Probab=99.71 E-value=4.6e-15 Score=173.28 Aligned_cols=343 Identities=16% Similarity=0.199 Sum_probs=213.1
Q ss_pred cceeeecCCCcccccccccCccccc-cCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~-~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r 557 (946)
.+|++.+.+..++..+. ....+.. ...+ ..+...++.+.|++++. ++. .++.++||.+++++++.+|
T Consensus 59 ~lGh~~p~i~~Ai~~q~-~~~~~~~~~~~~--------~~~~~~~lae~L~~~~p~~~~~-v~f~~sGSEAve~AlKlAr 128 (459)
T PRK05965 59 NVGYGQESIVEAAAEQM-RELPYATGYFHF--------GSEPAIRLAAKLAERAPGSLNH-VYFTLGGSDAVDSAVRFIR 128 (459)
T ss_pred cCCCCCHHHHHHHHHHH-HhcCCccccccc--------CCHHHHHHHHHHHhhCCCCcCE-EEEeCChhHHHHHHHHHHH
Confidence 56777776666666553 2212211 0001 11234478888888874 333 3667899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC----CCCC--------HHHHHHHH
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK----GNIN--------IEELRKAA 612 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~----g~~D--------~e~L~~~i 612 (946)
.|...+|.++|.+|| ...++||....+....|. .+..++.... ..-| ++++++.+
T Consensus 129 ~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 208 (459)
T PRK05965 129 HYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKV 208 (459)
T ss_pred HHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHH
Confidence 987666655567777 567889988655443221 1233332110 0123 36788888
Q ss_pred HhcC-CCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCC
Q 002263 613 EANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNL 679 (946)
Q Consensus 613 ~~~~-~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~ 679 (946)
+++. +++++|+++.- ...|++.+ .++++.++|++||+++|+|.+ +.||.+.|.+ | +|++++
T Consensus 209 ~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~-- 282 (459)
T PRK05965 209 AELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEV----ITGFGRTGPLFACEAEGVVPDLMTV-- 282 (459)
T ss_pred HhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hccCccCchhhhHhhcCCCCCeEEe--
Confidence 7554 67888888754 34566642 489999999999999999986 5677777654 2 699987
Q ss_pred CcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHH
Q 002263 680 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 759 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~ 759 (946)
.|.++ +|--.+|.+++++++++.+.... + ....... .+.+.|+.+.++++.+.|..+-++++.+.
T Consensus 283 gKgl~----gG~~Pi~av~~~~~i~~~~~~~~-----~-----~~~~~~h-~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 347 (459)
T PRK05965 283 AKGLT----SGYVPMGAVLMSDHVYQGIADGA-----G-----AAAPVGH-GYTYSAHPVSAAVGLEVLRLYHEGGLLAN 347 (459)
T ss_pred chhhc----cCCcceeEEEEcHHHHHHHhccc-----c-----ccccccc-cCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence 48773 33235788888887765442110 0 0000001 11244677778888999999987766554
Q ss_pred HHHHHHHHHHHHHHHhcc--CCee--eccCCCce-eeeEEEecccccccCC---CCHHHHHHHHHHCCcccCCCCCCCCC
Q 002263 760 SKIAILNANYMAKRLEKH--YPIL--FRGVNGTV-AHEFIVDLRGLKNTAG---IEPEDVAKRLMDYGFHGPTMSWPVPG 831 (946)
Q Consensus 760 ~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~-~~e~v~~~~~~~~~~g---~~~~~i~~~L~~~Gi~~~~~~~p~~~ 831 (946)
.....++|.++|++. +.++ +.|. |.. ..+++-+... +.... .-...+.+.+.++|+.+.... .+
T Consensus 348 ---~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~-~~~~~~~~~~~~~i~~~~~~~Gll~~~~g---~~ 419 (459)
T PRK05965 348 ---GQKAGPRFAAGLDALRAHPLVGDVRGR-GLLGALELVADKAT-KTPFDAALDPADRIFDRAYANGLVFRAFG---DG 419 (459)
T ss_pred ---HHHHHHHHHHHHHhhccCCCEEEEeec-ceEEEEEEeccccc-cCCCCchhHHHHHHHHHHHhCCeEEEecC---Cc
Confidence 346677888888764 2221 2221 222 1222211100 00000 013567788889999875332 36
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.+++.|....|++|||++++.|.++++++..
T Consensus 420 ~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 420 VLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999999988744
No 175
>PRK07482 hypothetical protein; Provisional
Probab=99.71 E-value=4.3e-15 Score=173.62 Aligned_cols=343 Identities=14% Similarity=0.189 Sum_probs=213.7
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.+|++.+.+..++..+... ..+ ++++.- -..+...++.+.|++++. ++. .++.++||.++++++..+|.
T Consensus 63 ~lGh~~p~v~~Av~~q~~~-~~~--~~~~~~-----~~~~~~~~lAe~L~~~~p~~~~~-v~f~~sGSEAve~AlKlAr~ 133 (461)
T PRK07482 63 NVGYGRTEVAEAIAEQAKE-LAY--YHTYVG-----HGTEASITLSKRIIDRAPAGMSK-VYYGLSGSDANETQIKLVWY 133 (461)
T ss_pred cCCCCCHHHHHHHHHHHHh-cCc--cccccc-----cCCHHHHHHHHHHHHhCCCCcCE-EEEeCchHHHHHHHHHHHHH
Confidence 5677777766666665321 111 111100 012345578888998874 343 36688999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC------C-------CCCHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK------G-------NINIEELRKAA 612 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~------g-------~~D~e~L~~~i 612 (946)
|...+|.++|++|| ...++||....+..+.|. .+..++.... + .-|+++|++.+
T Consensus 134 ~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 213 (461)
T PRK07482 134 YNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELI 213 (461)
T ss_pred HHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 87556655567777 468899987665443331 1233332110 0 11468888888
Q ss_pred Hhc-CCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEEEeCC
Q 002263 613 EAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 679 (946)
Q Consensus 613 ~~~-~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~ 679 (946)
++. .+++++|+++.- ...|++.+ .+++|.++|++||+++|+|.+ +.||.+.|.+ -+|++++
T Consensus 214 ~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~-- 287 (461)
T PRK07482 214 LAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEV----VTGFGRLGSMFGSDHYGIEPDLITV-- 287 (461)
T ss_pred HhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecc----ccCCCcCcchhhHHhcCCCCCEEEE--
Confidence 533 367888888753 34576642 599999999999999999986 5677777654 2699987
Q ss_pred CcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHH
Q 002263 680 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 759 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~ 759 (946)
.|.++ +|...+|.+++++++.+.+.... + ...... ..+.+.|+.+.++++.+.|..+-++++.+.
T Consensus 288 gKgl~----gG~~Pi~av~~~~~i~~~~~~~~-----~-----~~~~~~-h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~ 352 (461)
T PRK07482 288 AKGLT----SAYAPLSGSIVGEKVWDVLEQGS-----D-----EHGAIG-HGWTYSGHPICAAAALANLDILERENLVGN 352 (461)
T ss_pred ccccc----cCccccceeeecHHHHHHHhccc-----c-----cCCccc-cCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 48773 33335677777877655432110 0 000000 111245678888889999999987766554
Q ss_pred HHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccc-cCCC-----CHHHHHHHHHHCCcccCCCCCC
Q 002263 760 SKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-TAGI-----EPEDVAKRLMDYGFHGPTMSWP 828 (946)
Q Consensus 760 ~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~-~~g~-----~~~~i~~~L~~~Gi~~~~~~~p 828 (946)
+ ....++|.++|++. +.+. ..|. |.. . -+.+..... .... ....+.+.|.++|+.+... |
T Consensus 353 ~---~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm-~--giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--~ 423 (461)
T PRK07482 353 A---AEVGAYFRARLRAAFGDHPLVGEVRGV-GML-A--AVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM--P 423 (461)
T ss_pred H---HHHHHHHHHHHHHHHhcCCCEEEEeec-eeE-E--EEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC--C
Confidence 3 46677888888653 2221 2231 322 1 122211000 0000 1357888899999986422 2
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+++++.|+..+|++|||+++++|.++++++.+
T Consensus 424 ~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 424 HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2478999999999999999999999999887643
No 176
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.71 E-value=4.8e-16 Score=176.02 Aligned_cols=280 Identities=17% Similarity=0.200 Sum_probs=183.6
Q ss_pred HHHHHHHHHhhCCCcccccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++.+++++|.+...+..++|+ ++...+ ++.+. .++++|+++...++.+...+...|++++.+++++++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~---~~~l~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELL---IRAFL-----EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDG 128 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHH---HHHhc-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence 478889999999775544444454 343222 33321 245889999886655555678899999999998889
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc--CCEEEEecccccccccccCC----CccCCCE
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP----GYIGADV 674 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~gl~~p----g~~GaDi 674 (946)
.+|+++++++++ +++++|++++| |.+|.+. +++++.++++.+ |+++++|+++.. +..-..+ .....++
T Consensus 129 ~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~-~~~~~~~l~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 129 QLDLEDILVAID---DKPKLVFLCSPNNPTGNLL-SRSDIEAVLERTPEDALVVVDEAYGE-FSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchhh-hcCCccHHHHHhhCCCEE
Confidence 999999999875 78899999999 4789998 799999998887 999999998641 2111011 1122346
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+..+++|+|+. +|+++|++++++++.+.+.... ...+++ ......+.+++... +
T Consensus 204 ~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~--------------~~~~~~------~~~~~~~~~~l~~~--~ 257 (346)
T TIGR01141 204 VLRTLSKAFGL----AGLRIGYAIANAEIIDALNKVR--------------APFNLS------RLAQAAAIAALRDD--D 257 (346)
T ss_pred EEehhhHhhhc----hhhhceeeecCHHHHHHHHhcc--------------CCCCCC------HHHHHHHHHHhCCH--H
Confidence 67888999853 4678999999877665542110 001111 11112223333322 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC-CCCE
Q 002263 755 GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP-VPGT 832 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p-~~~~ 832 (946)
.+.+..++...+.+++.+.|++...+...++.+. -++++++ + +.+++.++|.++||.+.. ..|. ..+.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~---~~~~~~~------~-~~~~~~~~L~~~gI~v~~g~~f~~~~~~ 327 (346)
T TIGR01141 258 FIEKTVEEINAERERLYDGLKKLPGLEVYPSDAN---FVLIRFP------R-DADALFEALLEKGIIVRDLNSYPGLPNC 327 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCC---EEEEecC------C-CHHHHHHHHHHCCeEEEeCCCcCCCCCe
Confidence 3555666667788889998876422211111222 2455554 2 578999999999998643 2232 2588
Q ss_pred EEEEcCCCCCHHHHHHHHHHHH
Q 002263 833 LMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 833 lri~~t~~~t~~eid~~~~aL~ 854 (946)
+|++++ +++|+++++++|+
T Consensus 328 iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 328 LRITVG---TREENDRFLAALR 346 (346)
T ss_pred EEEecC---CHHHHHHHHHHhC
Confidence 999975 7899999998873
No 177
>PLN02822 serine palmitoyltransferase
Probab=99.71 E-value=1.2e-15 Score=179.14 Aligned_cols=315 Identities=12% Similarity=0.097 Sum_probs=196.8
Q ss_pred cceeecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHH
Q 002263 54 VYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 132 (946)
Q Consensus 54 ~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~ 132 (946)
.+.+|.+..|.+..-|+.+.+.+.+.- .|.+ ++..++..-|+.+.+.++++.+|+++|.+. ..++.+|.+++.++
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~--g~~g~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~a~~sa 185 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSALEKYGV--GSCGPRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLSTIFSV 185 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHHHHhCC--CCcccCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHHHHHHH
Confidence 344554444444444555544443211 1112 222334445778889999999999999764 45655665566666
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---ccccc-c---C------CCE-eEEEEEcC-CCc
Q 002263 133 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-K---S------GDV-CGVLVQYP-GTE 197 (946)
Q Consensus 133 ~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l~~-i---~------~~t-~~v~v~~p-n~~ 197 (946)
+.++. +++|.|+++...|.++...++. .+.++++++. ++++. + . +++ ++|++..+ +.+
T Consensus 186 i~a~~---~~gd~Ii~d~~~H~s~~~~~~l----s~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~ 258 (481)
T PLN02822 186 IPAFC---KKGDIIVADEGVHWGIQNGLYL----SRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNS 258 (481)
T ss_pred HHHhC---CCCCEEEEeCCccHHHHHHHHH----cCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCC
Confidence 65542 2789999999999998777642 2556666654 33332 2 1 234 56666555 669
Q ss_pred eeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC-----Cc-----cceEEEecc-ccccccCCCCCCceEEEEEchh
Q 002263 198 GEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE 266 (946)
Q Consensus 198 G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~-----~~-----GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~ 266 (946)
|.+.|+++|.++|+++|+++++| +.++++.+...+ .+ ..||+++|. |.|+.+ | ||++.+++
T Consensus 259 G~i~~L~~i~~l~~k~~~~LIvD-Ea~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~---G----G~i~g~~~ 330 (481)
T PLN02822 259 GQIAPLDEIVRLKEKYRFRVLLD-ESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATE---G----GFCTGSAR 330 (481)
T ss_pred CCccCHHHHHHHHHHcCCEEEEE-CCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhC---C----eEEEcCHH
Confidence 99999999999999999999994 566666654322 12 458999986 998631 2 78888888
Q ss_pred hhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Q 002263 267 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFA 346 (946)
Q Consensus 267 ~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~ 346 (946)
+++.+.. ...++.+ +.|.+ +....+..+++ ..+. ...++.++.+++.++|+
T Consensus 331 ii~~~~~----------~~~~~~f--------------sa~lP-p~~~~Aa~~aL--~~l~--~~~~~~~~l~~~~~~l~ 381 (481)
T PLN02822 331 VVDHQRL----------SSSGYVF--------------SASLP-PYLASAAITAI--DVLE--DNPSVLAKLKENIALLH 381 (481)
T ss_pred HHHHHHh----------cCCceee--------------ccccC-HHHHHHHHHHH--HHHH--hCHHHHHHHHHHHHHHH
Confidence 7765410 0011111 00110 01111222222 2221 12567788999999999
Q ss_pred HHHhcC-CCEEEcCCCCcCeEEEecC--------C---HHHHHHHHH-HcCCeeeee---------cCCeEEEEeccCCC
Q 002263 347 LGLKKL-GTVEVQGLPFFDTVKVKCA--------D---AHAIASAAY-KIEMNLRVV---------DSNTVTASFDETTT 404 (946)
Q Consensus 347 ~~L~~~-g~~~~~~~~~~~~~~i~~~--------~---~~~v~~~L~-~~GI~~~~~---------~~~~lris~~~~~t 404 (946)
++|+++ | +++........+.+.++ + ..+++++|. ++||.+... .+..+|++++..+|
T Consensus 382 ~~L~~~~g-~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t 460 (481)
T PLN02822 382 KGLSDIPG-LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHT 460 (481)
T ss_pred HHHHhcCC-cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCC
Confidence 999987 6 77753222222323332 1 357899987 789987642 12469999999999
Q ss_pred HHHHHHHHHHHhC
Q 002263 405 LEDVDKLFIVFAG 417 (946)
Q Consensus 405 ~edid~ll~~l~~ 417 (946)
++||++++++|+.
T Consensus 461 ~edI~~~~~~l~~ 473 (481)
T PLN02822 461 ESDILKASESLKR 473 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999974
No 178
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.71 E-value=1.5e-15 Score=175.30 Aligned_cols=316 Identities=15% Similarity=0.149 Sum_probs=197.8
Q ss_pred cceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHH
Q 002263 54 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 133 (946)
Q Consensus 54 ~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~ 133 (946)
.+.+|.+..+.++..|+.+.+.+.+.-.-+ .++...+..++|..+...++++.+++++|.+ . ..++.+|+.+..+++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~-~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~-~i~~tsG~~a~~~~~ 119 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDSH-GFGMASVRFICGTQDLHKELEEKLAKFLGTE-D-AILYSSCFDANGGLF 119 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHHc-CCCCcccccccCCcHHHHHHHHHHHHHhCCC-c-EEEEcChHHHHHHHH
Confidence 344555433345545665554444321111 1221223356788888888999999999976 3 445555676666665
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---ccccccc-cC----C--CEeEEEEEcC-CCceeecc
Q 002263 134 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----G--DVCGVLVQYP-GTEGEVLD 202 (946)
Q Consensus 134 la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~---~~~~l~~-i~----~--~t~~v~v~~p-n~~G~i~d 202 (946)
.++ .. +||+|++++..|+++...++. .|.+++.+ |++++++ ++ + ++++|++... |.+|.+.|
T Consensus 120 ~~l-~~--~gd~vi~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~ 192 (397)
T PRK06939 120 ETL-LG--KEDAIISDALNHASIIDGVRL----CKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP 192 (397)
T ss_pred HHh-CC--CCCEEEEEhhhhHHHHHHHHh----cCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence 554 23 899999999999999887643 34444444 4555554 43 3 6777776543 66899999
Q ss_pred hHHHHHHHHhCCcEEEEEecCccccCCCCC--------C-CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCC
Q 002263 203 YGDFIKNAHANGVKVVMATDLLALTILKPP--------G-ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 272 (946)
Q Consensus 203 i~~i~~~a~~~gal~~v~a~~~al~~l~~~--------~-~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp 272 (946)
+++|.++|+++|+++++| +..+.+.+... + ..++|++++|. |+|++ +.+|++++++++++.+.
T Consensus 193 ~~~l~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g------~r~G~v~~~~~~~~~l~ 265 (397)
T PRK06939 193 LPEICDLADKYDALVMVD-DSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGG------ASGGYTAGRKEVIDWLR 265 (397)
T ss_pred HHHHHHHHHHhCCEEEEE-CcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCc------cCceEEEeCHHHHHHHH
Confidence 999999999999999994 33343332211 1 12579999997 88732 24589999888776651
Q ss_pred CceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC
Q 002263 273 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 352 (946)
Q Consensus 273 ~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 352 (946)
.. ..+ +.+ +++ +..+...+..+++ .++. + .+++.++..++.+++++.|+++
T Consensus 266 ~~---------~~~-~~~-------------~~~--~~~~~~~a~~~al--~~~~-~-~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 266 QR---------SRP-YLF-------------SNS--LAPAIVAASIKVL--ELLE-E-SDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred Hh---------Ccc-ccc-------------cCC--CCHHHHHHHHHHH--HHHh-c-CHHHHHHHHHHHHHHHHHHHHc
Confidence 10 000 100 111 1112222333333 3332 2 2467788889999999999988
Q ss_pred CCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 353 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 353 g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
| +++... ....+.+..+. ..++++.|.++||.+... ..+.+|++++.+++++|++++++.|..
T Consensus 317 ~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~ 389 (397)
T PRK06939 317 G-FTLGPG-EHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEK 389 (397)
T ss_pred C-CCcCCC-CCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 7 765432 11223333332 678999999999987532 125799999999999999999999963
No 179
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.71 E-value=2.3e-15 Score=173.50 Aligned_cols=307 Identities=17% Similarity=0.187 Sum_probs=190.1
Q ss_pred cccHHHHHHHHHHHHHHhhCC--CcccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGF--DSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~--~~~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+..|. +...+.. ++++++...+ ++.+. .++++|++++..|+.+...++..|.+
T Consensus 67 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~---~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 138 (393)
T PRK05764 67 AAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNA---FMALL-----DPGDEVIIPAPYWVSYPEMVKLAGGV 138 (393)
T ss_pred CCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHH---HHHhc-----CCCCEEEecCCCCcchHHHHHHcCCE
Confidence 356656565666666555454 3333333 4444454333 33221 24578999999888888888999999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccc
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT 665 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~ 665 (946)
++.++.+++ +.+|+++++++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++.... .+..
T Consensus 139 ~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~ 215 (393)
T PRK05764 139 PVFVPTGEENGFKLTVEQLEAAIT---PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAE 215 (393)
T ss_pred EEEEecCcccCCcCCHHHHHHhhC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCC
Confidence 999998743 5789999999996 688899999994 688874 259999999999999999998763211 1110
Q ss_pred --C-----CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 666 --S-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 666 --~-----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
. +...+.++++.++.|+|+.| |.++|++..++++...+.... .....+++ .
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~~------------~~~~~~~~------~ 273 (393)
T PRK05764 216 FTSIASLSPELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKLQ------------SHSTSNPT------S 273 (393)
T ss_pred cccHHHcCCCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHHH------------hhcccCCC------h
Confidence 0 12234568888889998644 567899998877655432100 00011111 1
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-H
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 817 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~ 817 (946)
....++...+.. ..+.+++..+....+.+++.+.|+++..+.+..+.+.++ ++++++......+.+..++.+.|. +
T Consensus 274 ~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (393)
T PRK05764 274 IAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFY--VFPNVSKLLGKSITDSLEFAEALLEE 350 (393)
T ss_pred HHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceE--EEEecccccccccCCHHHHHHHHHHh
Confidence 111112222221 233344555555567788888888741222222233222 334554211111234578888876 5
Q ss_pred CCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 818 ~Gi~~-~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+|+.+ +...|+..+++||++. .++++++++++.|.+++++
T Consensus 351 ~gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 351 AGVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred CCEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 79985 4444555689999986 4689999999999888764
No 180
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.71 E-value=3.7e-16 Score=185.94 Aligned_cols=282 Identities=11% Similarity=0.077 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH-HHHhhcCCCeEEEEecc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI-CITRADGFDIKVVVSDL- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~-~~~~a~~~gi~v~~~~~- 176 (946)
..+.++|+.+|+++|++.+.+ +++|+|+++.++++|.. . +||+||+++++|.|+... +. ..|++.+++.+
T Consensus 174 G~i~eAq~~AA~~fgAd~tyF-lvNGTS~gn~a~i~a~~-~--~Gd~VLvdRN~HKSv~hgaLi----LsGa~PVYl~P~ 245 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYF-VLNGTSASNKVVTNALL-T--PGDLVLFDRNNHKSNHHGALI----QAGATPVYLETA 245 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEE-EeCChhHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----HcCCeEEEeecc
Confidence 578899999999999987644 78899999999988764 3 899999999999999875 42 24778887643
Q ss_pred ------------cc-----ccc-cC---CC-------EeEEEEEcCCCceeecchHHHHHH-HHhCCcEEEEE----ecC
Q 002263 177 ------------KD-----IDY-KS---GD-------VCGVLVQYPGTEGEVLDYGDFIKN-AHANGVKVVMA----TDL 223 (946)
Q Consensus 177 ------------~~-----l~~-i~---~~-------t~~v~v~~pn~~G~i~di~~i~~~-a~~~gal~~v~----a~~ 223 (946)
++ +++ +. ++ .++|++|+|||+|.+.|+++|+++ +|.++ .++|+ +++
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 22 433 32 22 689999999999999999999999 68888 88884 222
Q ss_pred ccccC---C-CCCCCccce----EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccc
Q 002263 224 LALTI---L-KPPGELGAD----IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 294 (946)
Q Consensus 224 ~al~~---l-~~~~~~GaD----i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~t 294 (946)
.-... + ....+.|+| +++.|. |.++. ++ +++++++++..++ |++.|
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lT----QaS~LHvk~~~i~--------------g~~~~------ 379 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FS----QTSQIHKKDNHIK--------------GQARY------ 379 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hh----hHhhhhcCCcccc--------------ccccc------
Confidence 11111 1 112578999 999999 55543 22 4678887654321 00000
Q ss_pred ccccccccccCCCccchHHHHHHHHHHHH--HHhC-hhhHHHHHHHHHHHHHHHHHHH-hcCCCEEEcCC----------
Q 002263 295 REQHIRRDKATSNICTAQALLANMAAMYA--VYHG-PEGLKTIAQRVHGLAGTFALGL-KKLGTVEVQGL---------- 360 (946)
Q Consensus 295 re~~irre~aTsni~t~~~l~a~~aa~y~--~~~g-~~Gl~~i~~~~~~~a~~l~~~L-~~~g~~~~~~~---------- 360 (946)
-.+.|...+-.-..|++++|.++||+-. .++. +.| +++.++..+++..+++.| +.+.+++++.+
T Consensus 380 -v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~ 457 (720)
T PRK13578 380 -CPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQD 457 (720)
T ss_pred -CCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeeccccccccccccc
Confidence 0011122222233466889999999832 2222 234 567777888899999988 55533776620
Q ss_pred -------------------C------------CcCe--EEEecCC--------------HHHHHHHHHHcCCeeeeecCC
Q 002263 361 -------------------P------------FFDT--VKVKCAD--------------AHAIASAAYKIEMNLRVVDSN 393 (946)
Q Consensus 361 -------------------~------------~~~~--~~i~~~~--------------~~~v~~~L~~~GI~~~~~~~~ 393 (946)
. ..|. ++|.+++ +..+.+.|+++||.++..+..
T Consensus 458 ~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~ 537 (720)
T PRK13578 458 YPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLN 537 (720)
T ss_pred CchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCC
Confidence 0 1232 4444333 478999998889999998889
Q ss_pred eEEEEeccCCCHHHHHHHHHHHh
Q 002263 394 TVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 394 ~lris~~~~~t~edid~ll~~l~ 416 (946)
.+.+-++..+|++++++|+++|.
T Consensus 538 ~vL~l~s~g~t~~~~~~Lv~aL~ 560 (720)
T PRK13578 538 SILFLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999996
No 181
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.71 E-value=1.5e-15 Score=172.55 Aligned_cols=288 Identities=15% Similarity=0.179 Sum_probs=185.2
Q ss_pred cHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 517 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
|......++++.+++++|.+. .+..++|+++.++ +++.+. +++++|+++...|+.+...+.+.|++++.++
T Consensus 58 g~~~~~~~l~~~la~~~~~~~-~i~~~~G~~~~~~---~l~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~ 128 (360)
T TIGR00858 58 GNSPLHEELEEELAEWKGTEA-ALLFSSGYLANVG---VISALV-----GKGDLILSDALNHASLIDGCRLSGARVRRYR 128 (360)
T ss_pred CCcHHHHHHHHHHHHHhCCCC-EEEECchHHHHHH---HHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEEec
Confidence 344456678899999998654 4556667655433 333321 2568899999988888888889999998887
Q ss_pred CCCCCCCCHHHHHHHHHhcC-CCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CC-----C
Q 002263 597 TDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP-----G 668 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~p-----g 668 (946)
. +|+++|+++++++. +++++|++.++ |.+|... ++++|.++|+++|+++++|+++.....+.. .+ +
T Consensus 129 ~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 202 (360)
T TIGR00858 129 H-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA-PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFG 202 (360)
T ss_pred C-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc-CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcC
Confidence 4 68999999997532 35778887777 4678887 799999999999999999998742211110 00 0
Q ss_pred --ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 669 --YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 669 --~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
..+.|+++.+++|+|+. +| |+++.++++.+.+.... .... ..... +...++++.+
T Consensus 203 ~~~~~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~-~~~~~----~~~~~~a~~~ 259 (360)
T TIGR00858 203 LKPEPVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINRA-----------RTLI-FSTAL----PPAVAAAALA 259 (360)
T ss_pred CCccCCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHhC-----------ccce-ecCCC----CHHHHHHHHH
Confidence 13678999999999853 33 67877766554331100 0000 00011 1111222233
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
.+..+.. ..+..++...+.+++.+.|++. +.+. .+.+.+ +.+.++. +.+..++.++|.++||.+...
T Consensus 260 al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~ 327 (360)
T TIGR00858 260 ALELIQE--EPWRREKLLALIARLRAGLEALGFTLM--PSCTPI---VPVIIGD-----NASALALAEELQQQGIFVGAI 327 (360)
T ss_pred HHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCeeEeee
Confidence 3333221 2344566678889999999875 3332 112222 3444431 234678999999999987432
Q ss_pred CC---C-CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 826 SW---P-VPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 826 ~~---p-~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
.+ + ..+.+||+++..++++|+++++++|+
T Consensus 328 ~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 328 RPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 22 1 23589999999999999999999873
No 182
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.71 E-value=2.9e-15 Score=173.34 Aligned_cols=319 Identities=19% Similarity=0.238 Sum_probs=203.1
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
.+|+|.+.+..++..+.....-+..+.+ .+...++.+.|++++..+ ...++.++||.++++++..+|.|
T Consensus 88 ~lGh~hp~v~~Av~~ql~~l~~~~~~~~----------~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~ 157 (442)
T TIGR03372 88 NVGHRNPNVIAAVENQLAKQPLHSQELL----------DPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAY 157 (442)
T ss_pred hcCCCCHHHHHHHHHHHHhCCCcccccC----------CHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHH
Confidence 4677776666665555322111111110 123457888899987543 23467899999999999988887
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCCCCCCHHHHHHHHHh---cCCCeEEEE
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLM 623 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~g~~D~e~L~~~i~~---~~~~t~~vv 623 (946)
...+| |.+|| ...+.||....+....|- .+..+|+ -|.+++++.+++ +++++++|+
T Consensus 158 t~~~g---r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAavI 229 (442)
T TIGR03372 158 QSPRG---KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAAII 229 (442)
T ss_pred HhhcC---CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEEEE
Confidence 53333 45566 567899998877654332 1233443 367888888753 346788888
Q ss_pred EeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCC
Q 002263 624 VTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGG 691 (946)
Q Consensus 624 vt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GG 691 (946)
+..- +..|++.+ .++++.++|++||+++++|.++ .|+.+.|.+ | +|++++ .|.++ +|-
T Consensus 230 vEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~----tG~GRtG~~~a~e~~gv~PDivt~--gK~lg----~G~ 299 (442)
T TIGR03372 230 LEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ----TGMGRTGKMFACEHEGVQPDILCL--AKALG----GGV 299 (442)
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc----cCCCccccchhhhhcCCCCCeeee--hhhhc----CCc
Confidence 8653 45577652 2999999999999999999874 456666643 2 688875 47763 331
Q ss_pred CcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHH
Q 002263 692 PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMA 771 (946)
Q Consensus 692 Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~ 771 (946)
-.+|.+++++++...+..... ...+.+.|+...++++.+.|..+-++++.+. .....++|.
T Consensus 300 ~Pigavv~~~~i~~~~~~~~~----------------~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~---~~~~G~~l~ 360 (442)
T TIGR03372 300 MPIGATIATEAVFSVLFDNPF----------------LHTTTFGGNPLACAAALATINELLEKNLPAQ---AAIKGDFLL 360 (442)
T ss_pred ccceEEEecHHHHHhhhccCc----------------cccCCCCCCHHHHHHHHHHHHHHHhccHHHH---HHHHHHHHH
Confidence 235666677776654421100 0011234567777788888988877766554 346678888
Q ss_pred HHHhcc---CC-ee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHH
Q 002263 772 KRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEE 845 (946)
Q Consensus 772 ~~L~~~---~~-v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~e 845 (946)
++|++. +. .. ..|. |.+ +-+.+.. ......+.+.|.++|+.+.....+ .+.+|+.|+..+|++|
T Consensus 361 ~~L~~l~~~~~~~i~~vRG~-Gl~---~giel~~-----~~~~~~i~~~l~~~Gvl~~~~~~~-~~~lr~~Ppl~~t~~~ 430 (442)
T TIGR03372 361 DGFQQLAAEYPDLIIEARGK-GLL---MAIEFRD-----NEIGYAFAKELFQQNILVAGTLNN-AKSIRIEPPLTITIEQ 430 (442)
T ss_pred HHHHHHHHhCCCceEEEecc-eEE---EEEEeCC-----hHHHHHHHHHHHHCCcEEeecCCC-CCEEEEECCcccCHHH
Confidence 888764 32 21 2231 322 2233221 123467899999999997533211 4789999999999999
Q ss_pred HHHHHHHHHHH
Q 002263 846 LDRYCDALISI 856 (946)
Q Consensus 846 id~~~~aL~~i 856 (946)
+|+++++|.++
T Consensus 431 id~~~~~l~~~ 441 (442)
T TIGR03372 431 CALVIKAAKDA 441 (442)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 183
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.71 E-value=1.4e-15 Score=172.52 Aligned_cols=279 Identities=16% Similarity=0.159 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+++++|.+ ++.++.+||.+.+.++.++... +|++|+++...|+++...++. .|++++.++.
T Consensus 19 ~~~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGIG--PGDEVIVPSFTFVATANAILL----LGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHHH----cCCeEEEEecCCC
Confidence 3557889999999975 4778889998888777766433 789999999999999887753 5888887654
Q ss_pred ------ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC---CCCccceEEEecc--
Q 002263 177 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGSA-- 244 (946)
Q Consensus 177 ------~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~---~~~~GaDi~v~s~-- 244 (946)
+++++ +++++++|++++ .+|.+.|+++|.++|+++|+++++++ .++++.... .+.+ .|+.+.|.
T Consensus 91 ~~~~d~~~l~~~i~~~~~~v~~~~--~~G~~~~~~~i~~l~~~~~i~li~D~-a~~~g~~~~~~~~~~~-~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITPRTKAIIPVH--LYGNPADMDAIMAIAKRHGLPVIEDA-AQALGATYKGRKVGTF-GDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCcCCeEEEEEC--CCCCcCCHHHHHHHHHHcCCeEEEEC-CCCCCCeECCEEcccC-cceeEEcCCC
Confidence 33445 677899999876 57999999999999999999999943 334443221 1222 58887773
Q ss_pred -ccccccCCCCCCceEEEEEc-hhhhhcCCCce-EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 245 -QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRI-VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 245 -k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~-~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|+|+ +|..|++.++ +++.+++.... -|...+ . . +.+..+.+.. ..+..+.+++
T Consensus 167 ~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~-~-----------~~~~~~~~~~--~~~~~~~aa~ 222 (352)
T cd00616 167 TKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRD----R-F-----------KYEHEILGYN--YRLSEIQAAI 222 (352)
T ss_pred CCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCC----C-C-----------ccccceeeec--cCcCHHHHHH
Confidence 5552 2234666665 46655442111 010000 0 0 0111111100 0111122222
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-----CcCeEEEecC---C--HHHHHHHHHHcCCeeeeec
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-----FFDTVKVKCA---D--AHAIASAAYKIEMNLRVVD 391 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-----~~~~~~i~~~---~--~~~v~~~L~~~GI~~~~~~ 391 (946)
.....++++++.++..++++++++.|+++.+++++..+ ....+.|.++ + ..++.+.|.++||.++...
T Consensus 223 --~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~ 300 (352)
T cd00616 223 --GLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHY 300 (352)
T ss_pred --HHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeec
Confidence 22233567888889999999999999997338887432 1223555544 3 7899999999999654210
Q ss_pred ---------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 392 ---------------------------SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 392 ---------------------------~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.+.+|++++.++|++|+++++++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 301 PPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 184
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.71 E-value=8.3e-16 Score=183.02 Aligned_cols=308 Identities=12% Similarity=0.094 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-HHHcCCEEEEEcCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGTDA 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-a~~~G~~vv~v~~~~ 599 (946)
.+.+.|+..++++|.+.+.+.+|++|+|+.+++++.. +++++||+++.+|-+...+ +.+.|++.++++...
T Consensus 175 ~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~--------~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~ 246 (720)
T PRK13578 175 AAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL--------TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR 246 (720)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc
Confidence 4789999999999999988889999999988777653 2578999999999998885 889999999997543
Q ss_pred C-----CCCCHHH-----HHHHHHhcCCC-------eEEEEEeCCCcccccccCHHHHHHH-HHHcCCEEEEeccccccc
Q 002263 600 K-----GNINIEE-----LRKAAEANRDN-------LSTLMVTYPSTHGVYEEGIDEICKI-IHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 600 ~-----g~~D~e~-----L~~~i~~~~~~-------t~~vvvt~Pn~~G~~~~~i~~I~~i-a~~~g~ll~vD~a~~~a~ 661 (946)
+ |.++.+. ++++|+++.++ .+++++|+|++.|++- |+++|+++ +|.++ .++||.|+. +.
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~y-di~~I~~~~~h~~~-~llvDEAhg-ah 323 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIY-NARQVVDKIGHLCD-YILFDSAWV-GY 323 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceee-cHHHHHHHhhccCC-cEEEeCcch-hh
Confidence 2 4566544 99999876332 6899999999999998 89999998 68888 999999874 22
Q ss_pred ccccC-----C---CccCCC----EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 662 VGLTS-----P---GYIGAD----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 662 ~gl~~-----p---g~~GaD----i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
..|.+ | .+.|+| +++.|.||+++. -...+.|-++...++. ..+.+.. .+-.+.-...
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-----lTQaS~LHvk~~~i~g-~~~~v~~-----~r~~~al~m~ 392 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-----FSQTSQIHKKDNHIKG-QARYCPH-----KRLNNAFMLH 392 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-----hhhHhhhhcCCccccc-ccccCCH-----HHHHHHHHHH
Confidence 22321 1 356999 999999999852 1223445444322110 0000000 0000000001
Q ss_pred cccCccchhhHHHHHHHH-HHHH-cHhhHHHHHHHHHHHHHHHHHHH-hcc--CCeeec---------------------
Q 002263 730 IAAAPWGSALILPISYTY-IAMM-GSKGLTEASKIAILNANYMAKRL-EKH--YPILFR--------------------- 783 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a~-l~~l-G~eGl~~~~~~~~~~a~~l~~~L-~~~--~~v~~~--------------------- 783 (946)
.+||| +..+++ +... .++| +..| ++..+..+..+..++++| +.. +.+..+
T Consensus 393 qSTSP--sY~LmA-SLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~ 468 (720)
T PRK13578 393 ASTSP--FYPLFA-ALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLR 468 (720)
T ss_pred cCCCh--HHHHHH-HHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccc
Confidence 12332 233322 2222 1222 2233 344556667777788777 332 333210
Q ss_pred ------cCC--------------CceeeeEEEeccccc------ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 002263 784 ------GVN--------------GTVAHEFIVDLRGLK------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 837 (946)
Q Consensus 784 ------~~~--------------~~~~~e~v~~~~~~~------~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~ 837 (946)
+.. +|. .+++.++.+. .+.|+.+..+++.|.++||.+...+ ...+.+-+
T Consensus 469 ~w~~~p~~~whgf~~~~~~~~~lDP~--KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---~~~vL~l~ 543 (720)
T PRK13578 469 FFSFEPGEKWHGFEGYAEDQYFVDPC--KLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---LNSILFLL 543 (720)
T ss_pred ccccccCccccccccccccccccCCc--eEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC---CCeEEEEe
Confidence 000 111 1223332221 0124458899999988899875443 36777888
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 002263 838 TESESKEELDRYCDALISIREE 859 (946)
Q Consensus 838 t~~~t~~eid~~~~aL~~i~~e 859 (946)
+...|++++++++++|.++.+.
T Consensus 544 s~g~t~~~~~~Lv~aL~~f~~~ 565 (720)
T PRK13578 544 TPAEDMAKLQQLVAMLARFEKH 565 (720)
T ss_pred CCCCCHHHHHHHHHHHHHHHHh
Confidence 8889999999999999988443
No 185
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.71 E-value=2.6e-15 Score=172.16 Aligned_cols=273 Identities=20% Similarity=0.146 Sum_probs=186.5
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||++...|+.+...+...++..|+++.+++. ++
T Consensus 64 ~~Le~~lA~l~G~~~--al~~~sG~~Ai~~~l~al-~~--~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~ 138 (386)
T PRK06767 64 KLFEERMAVLEGGEE--ALAFGSGMAAISATLIGF-LK--AGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEAD 138 (386)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 456789999999764 677888888877766665 23 89999999999999988887766678999888765 44
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|+. .++.+....|.++|+|+++.|. |.|+++ |+
T Consensus 139 l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~-a~a~~~~~~pl~~g~Div~~S~sK~l~g~---g~ 214 (386)
T PRK06767 139 IENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDN-TFCSPYLQRPLELGCDAVVHSATKYIGGH---GD 214 (386)
T ss_pred HHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEEC-CCcccccCCchhcCCcEEEecCcceecCC---CC
Confidence 555 7788999999998 679999999999999999999999943 3454445556678999999998 877532 33
Q ss_pred CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHH
Q 002263 256 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 335 (946)
Q Consensus 256 P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 335 (946)
+-+|+++++++.+.++-. ..++.-|+.. +++ .++ +...+-+-+....
T Consensus 215 ~~gG~v~~~~~~i~~~~~------------------------~~~~~~g~~~----~~~---~a~--l~~~~L~tl~~r~ 261 (386)
T PRK06767 215 VVAGVTICKTRALAEKIR------------------------PMRKDIGGIM----APF---DAW--LLLRGLKTLAVRM 261 (386)
T ss_pred ceeEEEEeChHHHHHHHH------------------------HHHHHhCCCC----CHH---HHH--HHHcCCCcHHHHH
Confidence 336899988876543200 0011111110 121 111 1233333445566
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEcC-C----------CCcCeEEEecCC----HHHHHHHHHHcCCeeee-----------
Q 002263 336 QRVHGLAGTFALGLKKLGTVEVQG-L----------PFFDTVKVKCAD----AHAIASAAYKIEMNLRV----------- 389 (946)
Q Consensus 336 ~~~~~~a~~l~~~L~~~g~~~~~~-~----------~~~~~~~i~~~~----~~~v~~~L~~~GI~~~~----------- 389 (946)
++.++++.++++.|+++.+++.+. + .....|+|.+++ +.++.++|+..++.++.
T Consensus 262 ~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCC
Confidence 777899999999999984476432 1 112347776653 56788888766653310
Q ss_pred ----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 ----------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ----------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++.-+.++=+++|.++|.
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 384 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALK 384 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 123679999987765555566666663
No 186
>PLN02624 ornithine-delta-aminotransferase
Probab=99.70 E-value=5.1e-15 Score=173.74 Aligned_cols=293 Identities=20% Similarity=0.303 Sum_probs=189.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHh-cCCC-CCCEEE-EcCCCCCCCHHHHHHcCCE-------
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCI-IPVSAHGTNPATAAMCGMK------- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~-~G~~-~~~~Il-i~~saHg~~~~~a~~~G~~------- 591 (946)
..++.+.|++++|++.+ ++.++|+.++++++...|.|+.. +|.. .+.+|+ ...+.||....+..+.|-.
T Consensus 119 ~~~la~~L~~~~~~~~~-~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 197 (474)
T PLN02624 119 FPEFAEYLTSMFGYDMV-LPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFG 197 (474)
T ss_pred HHHHHHHHHhhcCCCeE-EEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCC
Confidence 45788899999987754 56789999999888888887432 3322 233454 4577899877765543311
Q ss_pred -----EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc-C--HHHHHHHHHHcCCEEEEecccccccc
Q 002263 592 -----IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE-G--IDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 592 -----vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~-~--i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
+..+|. .|++.+++.++.+.+++++|+++.+ +..|.+.+ + +++|.++|++||+++++|+++.
T Consensus 198 ~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t---- 268 (474)
T PLN02624 198 PLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT---- 268 (474)
T ss_pred CCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 233333 3789999999766678999999887 46787652 2 9999999999999999999863
Q ss_pred cccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 663 GLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 663 gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
|+.+.|. ..+|++++ .|.|+ +|+..+|.+.+++++...+.... .....+
T Consensus 269 G~GrtG~~~a~~~~~i~pDiv~l--sK~lg----gG~~pigav~~~~~i~~~~~~~~--------------~~~T~~--- 325 (474)
T PLN02624 269 GLARTGKMLACDWEEVRPDVVIL--GKALG----GGVIPVSAVLADKDVMLCIKPGE--------------HGSTFG--- 325 (474)
T ss_pred CcCcCcchhhHHhcCCCCCEEEe--ccccc----CCCCcceeeeecHHHHhHhccCC--------------cCCCCC---
Confidence 3433332 23688876 48664 55567888888876554331100 001112
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC--ee-eccCCCceeeeEEEecccccccCCCCH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP--IL-FRGVNGTVAHEFIVDLRGLKNTAGIEP 808 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~--v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~ 808 (946)
++...++++.+.|..+..+++.+ +...+.++++++|+++ +. +. ..+ .+ .+..+.++... ......
T Consensus 326 -g~pl~~aaa~aaLe~l~~~~l~~---~~~~~~~~l~~~L~~l~~~~~~~i~~vrg-~G-~~~~i~l~~~~---~~~~~a 396 (474)
T PLN02624 326 -GNPLASAVAMAALQVVQDEKLAE---RSAKLGQELRDQLQKIQKQFPKLIKEVRG-RG-LLNAVVLNSPK---LGPVSA 396 (474)
T ss_pred -CCHHHHHHHHHHHHHHHhchHHH---HHHHHHHHHHHHHHHHHHhCCCceEEEEe-eE-EEEEEEecCCC---cChHHH
Confidence 23445556666677665555443 3335567777777653 22 11 112 12 22223333211 001235
Q ss_pred HHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 809 EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 809 ~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.++++.|.++|+.+.... .+.|||+|+..+|++|||++++.|++++++
T Consensus 397 ~~~~~~L~e~GV~v~p~~---~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 397 YDVCLKLKERGLLAKPTH---DTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHhCCeEEecCC---CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 689999999999874222 478999999999999999999999988765
No 187
>PRK05968 hypothetical protein; Provisional
Probab=99.70 E-value=8.9e-16 Score=175.98 Aligned_cols=274 Identities=18% Similarity=0.149 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|+++|.+. +.++.+||+++.++++++ +. +||+||++...|+.+...+...++..|++++++|..
T Consensus 65 ~~~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al-~~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 139 (389)
T PRK05968 65 VRAFEEMLAKLEGAED--ARGFASGMAAISSTVLSF-VE--PGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEE 139 (389)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHH
Confidence 4567899999999975 567788888777666554 23 899999999999998887766666789999998764
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ + ++|++|++++| |..+.+.|+++|+++||++|++++|+. .++.+....|.++|+|+++.|. |.|++| |
T Consensus 140 ~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~-a~a~~~~~~p~~~g~Divv~S~tK~l~g~---~ 214 (389)
T PRK05968 140 AVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDN-SWASPVFQRPITLGVDLVIHSASKYLGGH---S 214 (389)
T ss_pred HHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEEC-CCcchhccCchhcCCcEEEeeccccccCC---C
Confidence 4555 5 57899999998 678999999999999999999999953 3444544456678999999998 777643 3
Q ss_pred CCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 255 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 255 GP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
++.+|+++.++++++++... + ....| ..+ ++ ..|++ ...+-+.+...
T Consensus 215 ~~~gG~i~~~~~~~~~l~~~--------------------~----~~~~g-~~~---~~---~~A~~--~l~~L~tl~~r 261 (389)
T PRK05968 215 DTVAGVVAGSKEHIARINAE--------------------A----YPYLG-AKL---SP---FEAWL--LLRGLRTLPLR 261 (389)
T ss_pred CeEEEEEEECHHHHHHHHHH--------------------H----HHhCC-CCC---Ch---HHHHH--HHcccCcHHHH
Confidence 34568888888766544100 0 00001 000 11 12221 23344456666
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEcCCC------------CcCeEEEecCC---HHHHHHHHHHcCCeee-----e-----
Q 002263 335 AQRVHGLAGTFALGLKKLGTVEVQGLP------------FFDTVKVKCAD---AHAIASAAYKIEMNLR-----V----- 389 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~~~~~~------------~~~~~~i~~~~---~~~v~~~L~~~GI~~~-----~----- 389 (946)
.++..+++.++++.|++..+++.+..+ +...|+|.+++ +.++.++|...++.++ .
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~ 341 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPA 341 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeC
Confidence 677788899999999988446443211 12257777753 6678888876554221 0
Q ss_pred -----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 -----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 -----------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.++.||+|++..++++=+++|.++|..
T Consensus 342 ~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 342 EVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 1146899999999888888888888863
No 188
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=4.1e-15 Score=171.79 Aligned_cols=279 Identities=20% Similarity=0.266 Sum_probs=186.8
Q ss_pred HHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE--------
Q 002263 523 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-------- 591 (946)
Q Consensus 523 ~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~-------- 591 (946)
.++.+++++++|.+ ...+..++|++++++++.+++. .| +++|+ +..++||....+....|..
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~----~g---~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL----TG---RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEP 160 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH----HC---CCeEEEECCCcCCccHHHHhccCCcccccCCCC
Confidence 47888999998854 2346677888888766665553 22 34455 4467898887766555532
Q ss_pred ----EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEeccccccccc
Q 002263 592 ----IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVG 663 (946)
Q Consensus 592 ----vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~g 663 (946)
++.+|. .|++++++++. +++++|+++.+ |.+|.+.++ +++|.++|++||+++++|+++. +
T Consensus 161 ~~~~~~~~~~-----~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~----g 228 (398)
T PRK03244 161 LPGGVEHVPY-----GDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT----G 228 (398)
T ss_pred CCCCceEeCC-----CCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----C
Confidence 233332 38999999885 68999999877 578887633 8999999999999999999863 3
Q ss_pred ccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCcc
Q 002263 664 LTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 664 l~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~ 735 (946)
+.+.|. ...|++++ .|+|+ ||-++|.+.+++++.+.+.... .... +.
T Consensus 229 ~gr~g~~~~~~~~~~~pDi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~--------------~~~t----~~ 283 (398)
T PRK03244 229 IGRTGAWFAHQHDGVTPDVVTL--AKGLG-----GGLPIGACLAFGPAADLLTPGL--------------HGST----FG 283 (398)
T ss_pred CcccchHHhhhhhCCCCCEEEE--chhhh-----CCcccEEEEEcHHHHhhccCCC--------------CcCC----CC
Confidence 332321 23688766 59884 4456888888877665442110 0011 12
Q ss_pred chhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 736 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
++.+.++++.++|..+..+.+. ++...+.++|.+.|++. +.+. ..+ .+.+ +.+.++. ..+.++.
T Consensus 284 ~~~~~~aaa~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~---~~i~~~~------~~~~~~~ 350 (398)
T PRK03244 284 GNPVACAAALAVLDTIASEGLL---ENAERLGEQLRAGIEALGHPLVDHVRG-RGLL---LGIVLTA------PVAKAVE 350 (398)
T ss_pred CCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhcCCCceeeEee-ccEE---EEEEEec------cHHHHHH
Confidence 3455566677787777655544 34446678899999874 3221 122 1222 2333321 1467899
Q ss_pred HHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 813 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 813 ~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
++|.++|+.+.... .+.||++|+..+|++|||+++++|++++.+++
T Consensus 351 ~~l~~~Gv~~~~~~---~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 351 AAAREAGFLVNAVA---PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 99999999875432 37899999999999999999999999987654
No 189
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=4.5e-15 Score=171.73 Aligned_cols=332 Identities=16% Similarity=0.182 Sum_probs=209.4
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.+|++.+.+..++..+.... .+....-+ ..+...++.+.|++++. ++. .++.++|+.++++++..+|.
T Consensus 57 ~lGh~~p~v~~ai~~q~~~~-~~~~~~~~--------~~~~~~~lae~L~~~~p~~~~~-v~f~~sGseAve~AlklAr~ 126 (429)
T PRK06173 57 LHGYNHPRLNAAATNQLAKM-SHIMFGGF--------THEPAVELAQKLLEILPPSLNK-IFFADSGSVAVEVAMKMALQ 126 (429)
T ss_pred cCCCCCHHHHHHHHHHHHhc-CCcccccc--------CCHHHHHHHHHHHhhCCCCcCE-EEEeCCchHHHHHHHHHHHH
Confidence 56777766665555553221 11110001 01234578888888874 333 36778999999999999999
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCC------CCCCHHHHHHHHHhcCCC
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK------GNINIEELRKAAEANRDN 618 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~------g~~D~e~L~~~i~~~~~~ 618 (946)
|...+|.++|.+|+ ...+.||....+..+.|- .+..+|.... ...+++.|++.++++.++
T Consensus 127 ~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~ 206 (429)
T PRK06173 127 YQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDE 206 (429)
T ss_pred HHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCc
Confidence 87666655566776 567889975544333221 1233433111 112577788888766678
Q ss_pred eEEEEEeCC--Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEEEeCCCccccc
Q 002263 619 LSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCI 685 (946)
Q Consensus 619 t~~vvvt~P--n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~hK~f~~ 685 (946)
+++|+++.- +..|++.+ .++++.++|++||+++++|.++ .|+.+.|.+ -+|++++ .|.++
T Consensus 207 iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~- 279 (429)
T PRK06173 207 IAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA----TGFGRTGKLFALEHAGVVPDIMCI--GKALT- 279 (429)
T ss_pred EEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh----cCCCcCCcchHHHhcCCCCCEEEe--ehhhh-
Confidence 999998862 45566642 5999999999999999999875 345454432 3688885 58773
Q ss_pred CCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHH
Q 002263 686 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 765 (946)
Q Consensus 686 P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~ 765 (946)
+|-..++.+.+++++.+.+..... + ... .++++.|+.+.++++.+.|..+-++.+.+ +...
T Consensus 280 ---gG~~p~~a~~~~~~i~~~~~~~~~----------~--~~~-~~~T~~g~p~~~aaa~a~l~~i~~~~~~~---~~~~ 340 (429)
T PRK06173 280 ---GGYLTLSATITTEAIAQTICSGEA----------K--CFM-HGPTFMANPLACAIAAESIRLLLESPWQQ---NIQR 340 (429)
T ss_pred ---CCccccceEEecHHHHHHHhcCCC----------C--ccc-cCCCCCcCHHHHHHHHHHHHHHHhCCHHH---HHHH
Confidence 332456777777776655421100 0 000 01112346677788888888887665543 4456
Q ss_pred HHHHHHHHHhcc--CCee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCC
Q 002263 766 NANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESE 841 (946)
Q Consensus 766 ~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~ 841 (946)
+.++|.++|++. +... ..+ .+.. .-+.+.. ......+.++|.++|+.+... .++||+.|+...
T Consensus 341 ~g~~l~~~L~~~~~~~~v~~vRg-~Gl~---~~iel~~-----~~~~~~i~~~l~e~Gi~v~~~----g~~l~~~Ppl~i 407 (429)
T PRK06173 341 IEAQLKQELAPAAEFDSVAEVRV-LGAI---GVVEMKE-----PVNMATLQPRFVEHGIWVRPF----GKLVYIMPPFII 407 (429)
T ss_pred HHHHHHHHHHHhhcCCCeeeeec-cceE---EEEEeCC-----cccHHHHHHHHHHCCeEEEec----CCEEEEeCCccC
Confidence 778888888753 3321 112 1321 2233321 124578999999999987533 368999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 002263 842 SKEELDRYCDALISIREEIA 861 (946)
Q Consensus 842 t~~eid~~~~aL~~i~~e~~ 861 (946)
|++|+|+++++|++++.++.
T Consensus 408 t~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 408 SPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999987653
No 190
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.70 E-value=5.6e-15 Score=170.10 Aligned_cols=288 Identities=20% Similarity=0.262 Sum_probs=186.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCCEEEEE---cC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVSV---GT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~~vv~v---~~ 597 (946)
..++.+.|+++++.+.+ ++.++|++++++++.++|.|+..+|..+|++||+ ..+.||....+....|.....- |.
T Consensus 75 ~~~la~~l~~~~~~~~v-~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 153 (389)
T PRK01278 75 QERLAERLVENSFADKV-FFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPL 153 (389)
T ss_pred HHHHHHHHHhhCCCCEE-EEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCC
Confidence 45788899998876643 6678899999999999998876677555667775 4678888877765544332211 11
Q ss_pred CCCC----CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc---cCHHHHHHHHHHcCCEEEEecccccccccccCCCc
Q 002263 598 DAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 669 (946)
Q Consensus 598 ~~~g----~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~ 669 (946)
.++. ..|+++++++++ +++++|+++.++ +.|.+. +++++|.++|++||+++++|+++. |+.+.|.
T Consensus 154 ~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~----g~g~~g~ 226 (389)
T PRK01278 154 VPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC----GMGRTGK 226 (389)
T ss_pred CCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCCc
Confidence 1111 258999999996 689999998654 456332 369999999999999999999763 3333221
Q ss_pred ------cC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 670 ------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 670 ------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
.| +|++++ .|.|+ +|..+|.+++++++.+.+.... .....+ ++...+
T Consensus 227 ~~~~~~~~~~pdi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~--------------~~~t~~----~~~~~~ 281 (389)
T PRK01278 227 LFAHEWAGVTPDIMAV--AKGIG-----GGFPLGACLATEEAAKGMTPGT--------------HGSTYG----GNPLAM 281 (389)
T ss_pred ceeecccCCCCCEEEE--ehhcc-----CCcceEEEEEcHHHHhccCCCC--------------CCCCCC----ccHHHH
Confidence 23 576654 58874 4577899999887765542110 001112 234444
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~-v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
+++.+.|..+-.+++.+ +...+.++++++|++. +. +. ..+ .+.. +.+.+. .+..++.++|
T Consensus 282 aaa~a~l~~l~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~~~v~g-~G~~---~~i~~~-------~~~~~~~~~l 347 (389)
T PRK01278 282 AVGNAVLDVILAPGFLD---NVQRMGLYLKQKLEGLVDRFPDVIEEVRG-KGLL---LGLKCV-------VPNRDLVQAL 347 (389)
T ss_pred HHHHHHHHHHhhhHHHH---HHHHHHHHHHHHHHHHHhhCCCceeeEec-ccEE---EEEEEe-------cCHHHHHHHH
Confidence 55666666664443333 3335566777777653 22 21 111 1211 223322 2467899999
Q ss_pred HHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 816 MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 816 ~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.++|+.+.... .+.+|++|+...++++|+++++.|++++++
T Consensus 348 ~~~GV~~~p~~---~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 348 RDEGLLTVGAG---DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred HHCCeEEeecC---CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999853221 478999999888999999999999887654
No 191
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.70 E-value=6.5e-15 Score=169.11 Aligned_cols=289 Identities=20% Similarity=0.238 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCEEEEE---c
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVSV---G 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~vv~v---~ 596 (946)
...++.+++++..+++. .++.++|++++++++.++|.|... +.+++++|| ...+.||....++...|...... |
T Consensus 79 ~~~~la~~l~~~~~~~~-v~f~~SGseA~e~Aik~ar~~~~~-~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 79 PMAKLAGLLTQHSCFDK-VFFANSGAEANEGAIKLARKWGRK-HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred HHHHHHHHHhhccCCCE-EEEeCCcHHHHHHHHHHHHHHhhc-cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 45577788887766654 367789999999999888887532 222345555 56789999888877666432111 1
Q ss_pred CCCC----CCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCC
Q 002263 597 TDAK----GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 597 ~~~~----g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg 668 (946)
.... ...|+++++++++ +++++|+++... ..|++.+ .+++|.++|++||+++++|.++ .|+.+.|
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~----tG~GRtG 229 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQ----TGCGRTG 229 (395)
T ss_pred CCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCCCc
Confidence 1111 1257899999886 678888888553 4566652 2999999999999999999874 3555555
Q ss_pred cc--------CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 669 YI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 669 ~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
.+ .+|++++ .|.++ +|.| +|.+++++++..+.++.. .+. +.|+.+.
T Consensus 230 ~~~a~~~~gv~PDi~t~--gK~lg----~G~p-~~av~~~~~i~~~~~~~~---------------~~T----~~g~pl~ 283 (395)
T PRK03715 230 TLFAYELSGIEPDIMTL--GKGIG----GGVP-LAALLAKAEVAVFEAGDQ---------------GGT----YNGNPLM 283 (395)
T ss_pred chhhHhhcCCCCceeee--hhhhh----CCcc-eEEEEEccccccccCCCc---------------CCC----CCCCHHH
Confidence 42 3688876 48884 3334 666777777653332210 011 2245666
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee-eccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
++++.+.|..+.++++.+ +..++.++|.++|++. +.+. ..|. +.. +-+.+.. .....+.+.+.
T Consensus 284 ~aaala~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~i~~vrG~-Glm---~~i~l~~------~~~~~~~~~~~ 350 (395)
T PRK03715 284 TAVGVAVISQLLAPGFLE---GVRARGEYLKEKLLELSEERGLEGERGE-GLL---RALLLGK------DIGPQIVEKAR 350 (395)
T ss_pred HHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHhhcCCcCeEEcc-eeE---EEEEecC------chHHHHHHHHH
Confidence 777888888886655544 4456788888888764 2221 2221 222 2233321 12334444444
Q ss_pred HC---CcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 817 DY---GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 817 ~~---Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+. |+.+.... +++||++|+..+|++|||+++++|.++++++
T Consensus 351 ~~~~~Gi~~~~~~---~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 351 DMQPDGLLLNAPR---PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred hccCCCEEEeecC---CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 44 98874332 4789999999999999999999999988753
No 192
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.70 E-value=2.4e-15 Score=172.18 Aligned_cols=299 Identities=15% Similarity=0.162 Sum_probs=191.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHH----HHH--hcCCCCCCEEEEcCCCCCCCHHHHHHc-
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA----YHK--ARGDHHRNVCIIPVSAHGTNPATAAMC- 588 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~----y~~--~~G~~~~~~Ili~~saHg~~~~~a~~~- 588 (946)
.|+.....++++.|++++|.+.+ +..++|-+++.+++.++-. .+. ....++++.|+.....|.+....+.+.
T Consensus 143 ~G~~~~h~~LE~~LA~f~g~e~a-ll~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~ 221 (476)
T PLN02955 143 CGYTTYHRLLESSLADLKKKEDC-LVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAE 221 (476)
T ss_pred ccChHHHHHHHHHHHHHHCCCcE-EEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcc
Confidence 45556677899999999999876 4556787777666554410 000 001124556777777787777777776
Q ss_pred ---CCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc
Q 002263 589 ---GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 664 (946)
Q Consensus 589 ---G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl 664 (946)
+.+++.++. .|+++|+++++++.++.+.|++..- +..|.+- |+++|.++|++||++++||.||..+..|-
T Consensus 222 ~~~~a~~~~f~H-----ND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdia-pL~eL~~L~~~~ga~LiVDEAH~~Gv~G~ 295 (476)
T PLN02955 222 RQGNVEVFVYRH-----CDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFA-PMEELSQLRKKYGFLLVIDDAHGTFVCGE 295 (476)
T ss_pred ccCCceEEEeCC-----CCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcC-CHHHHHHHHHHcCcEEEEcccccCceecC
Confidence 578888886 5999999999876555655555432 5678887 79999999999999999999985333221
Q ss_pred cCCC---cc----CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 665 TSPG---YI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 665 ~~pg---~~----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
.--| .+ ..||++.++.|.|+. ..|++++++++++++.... + +.+.++. ..
T Consensus 296 ~G~G~~e~~g~~~di~ii~~TLsKA~G~-------~GGfi~gs~~~~~~l~~~~-----------~----~~ifSta-lp 352 (476)
T PLN02955 296 NGGGVAEEFNCEADVDLCVGTLSKAAGC-------HGGFIACSKKWKQLIQSRG-----------R----SFIFSTA-IP 352 (476)
T ss_pred CCCcHHHHhCCCCCCcEEEEeCccchhc-------cCceeecHHHHHHHHHHhC-----------C----CCeeccc-cc
Confidence 0011 12 358889999998842 2368888876665542110 0 0111000 01
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
...++++.+.+..+-.+ ....++..++.+|+++.+ .+.+. .|.. .+++.. ...+..++++|.+
T Consensus 353 p~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~--G~~~~-----sPI~-pI~ig~-------~~~a~~~~~~L~~ 415 (476)
T PLN02955 353 VPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS--GVDIS-----SPII-SLVVGN-------QEKALKASRYLLK 415 (476)
T ss_pred HHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc--CCCCC-----CCEE-EEEeCC-------HHHHHHHHHHHHH
Confidence 12222333334443222 123455667888888742 23321 2332 122221 2346788999999
Q ss_pred CCcccCCCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 818 ~Gi~~~~~~~p-~~---~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+||++..+.|| ++ ..|||+++..+|++|||+++++|.++.+.+.
T Consensus 416 ~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 416 SGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred CCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 99999877777 33 3699999999999999999999998866644
No 193
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=4.3e-15 Score=173.07 Aligned_cols=332 Identities=17% Similarity=0.205 Sum_probs=208.2
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..+|+|.+.+..++..+.....-+..+ + ..+...++.+.|++++.-+ ...++.++||.++++++..+|.
T Consensus 94 ~~lGH~~p~v~~Ai~~ql~~l~~~~~~--~--------~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~ 163 (459)
T PRK11522 94 FNVGHRNPVVVSAVQNQLAKQPLHSQE--L--------LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKA 163 (459)
T ss_pred hhcCCCCHHHHHHHHHHHhhCcccccc--c--------CCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHH
Confidence 356777766666655553211111111 1 1123457788888887532 2346788999999999998888
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCEEEEE---cCCCC----CCCCHHHHHHHHHh---cCCCeEEEEEeCC
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVSV---GTDAK----GNINIEELRKAAEA---NRDNLSTLMVTYP 627 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~vv~v---~~~~~----g~~D~e~L~~~i~~---~~~~t~~vvvt~P 627 (946)
|...+| |.+|| ...++||....+....|-....- |..++ -..|.+++++++++ +++++++|++..-
T Consensus 164 ~t~~~g---r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv 240 (459)
T PRK11522 164 YQSPRG---KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPI 240 (459)
T ss_pred HhccCC---CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecc
Confidence 753322 44566 45789999887765544321111 11111 01378899998864 3357888888754
Q ss_pred -Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCCCcce
Q 002263 628 -STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMG 695 (946)
Q Consensus 628 -n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GGPg~G 695 (946)
+..|++.+ .++++.++|++||+++|+|.++ .|+.+.|.+ | +|++++ .|.++ +|--.+|
T Consensus 241 ~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~----tG~GRtG~~~a~e~~gv~PDivt~--gK~lg----gG~~Pig 310 (459)
T PRK11522 241 QGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ----TGMGRTGKMFACEHENVQPDILCL--AKALG----GGVMPIG 310 (459)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce----ecCCccchhhhhhccCCCCCEEEe--chhhh----CCCccce
Confidence 45677763 2999999999999999999875 455566543 3 688876 48763 3312355
Q ss_pred eEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHh
Q 002263 696 PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE 775 (946)
Q Consensus 696 ~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~ 775 (946)
.+++++++...+..... . ..+.+.|+...++++.+.|..+-++++. ++...+.++|.++|+
T Consensus 311 av~~~~~i~~~~~~~~~---------------~-~~~T~~gnp~~~Aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~ 371 (459)
T PRK11522 311 ATIATEEVFSVLFDNPF---------------L-HTTTFGGNPLACAAALATINVLLEQNLP---AQAEQKGDYLLDGFR 371 (459)
T ss_pred eEEEcHHHHHHhccCCc---------------c-cCCCCCCCHHHHHHHHHHHHHHhcchHH---HHHHHHHHHHHHHHH
Confidence 66666655443211000 0 0112445677778888999998776654 445577889999887
Q ss_pred cc---CC-ee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 002263 776 KH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 849 (946)
Q Consensus 776 ~~---~~-v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~ 849 (946)
+. +. ++ ..|. +.. +-+.+.. ......+.+.|.++|+.+.... +..+.+|+.|+..+|++|||++
T Consensus 372 ~l~~~~~~~i~~VrG~-Gl~---~giel~~-----~~~~~~i~~~l~~~Gvl~~~~~-~~~~~lr~~Ppl~~t~~~id~~ 441 (459)
T PRK11522 372 QLAREYPDLVQEARGK-GML---MAIEFVD-----NEIGYNFASEMFRQRVLVAGTL-NNAKTIRIEPPLTLTIEQCEQV 441 (459)
T ss_pred HHHHhCCCceeeEEec-eeE---EEEEecC-----chHHHHHHHHHHHCCeEEEecC-CCCCEEEEECCccCCHHHHHHH
Confidence 64 33 21 2221 322 2233321 1135678999999999875321 1247899999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 002263 850 CDALISIREEIAQI 863 (946)
Q Consensus 850 ~~aL~~i~~e~~~~ 863 (946)
+++|.++++++.+.
T Consensus 442 l~~l~~~l~~~~~~ 455 (459)
T PRK11522 442 LKAARKALAAMRVS 455 (459)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999888763
No 194
>PLN02590 probable tyrosine decarboxylase
Probab=99.69 E-value=1.3e-14 Score=170.33 Aligned_cols=359 Identities=12% Similarity=0.087 Sum_probs=215.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCc-c--eeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 104 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~-~--~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~ 104 (946)
.+| +++.+-.++++++.+....... + ..|.|.-.-+...++.+.+.+.+ .| .. ..+.-+.|.+..++-.+.
T Consensus 102 ~~P--~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~s--a~-n~-~~~~~~~sPa~t~lE~~v 175 (539)
T PLN02590 102 SAP--ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNA--GL-SV-VGFTWLTSPAATELEIIV 175 (539)
T ss_pred CCC--CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHH--hc-cc-ccCCcccCchhHHHHHHH
Confidence 455 5778888999999876544322 1 12333311111134444433222 11 11 223334566666777778
Q ss_pred HHHHHHHhCCCC-------cceEEcccHHHHHHHHHHHhccc--c--C----CCCEEEEcCCCCHHHHHHHHHhhcCCCe
Q 002263 105 QTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ--K--G----KKKTFIIASNCHPQTIDICITRADGFDI 169 (946)
Q Consensus 105 q~~la~L~g~~~-------~~~sl~~~~Ta~~ea~~la~~~~--~--~----~gd~vvv~~~~Hps~~~~~~~~a~~~gi 169 (946)
-+++++|+|++. ....++++||.+.-..+++.|-. + + ++-.|++|+..|.|+.+.++.+ +.|-
T Consensus 176 i~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il--Glg~ 253 (539)
T PLN02590 176 LDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG--GIHE 253 (539)
T ss_pred HHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc--CCCc
Confidence 899999999986 34567888885443333332211 0 0 1225667899999998887643 2321
Q ss_pred -EEEEecc----------ccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC
Q 002263 170 -KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK 230 (946)
Q Consensus 170 -~v~~~~~----------~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~ 230 (946)
.++.++. ++|++ |.. ...+|+.+.. +.+|.++||++|+++|+++|++++|++-.-+...+.
T Consensus 254 ~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~ 333 (539)
T PLN02590 254 ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACIC 333 (539)
T ss_pred ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcC
Confidence 2444443 23444 422 2466777776 459999999999999999999999955222222121
Q ss_pred CC------CCccceEEEecc-ccccccCCCCCCceEEEEEchh--hhhcC--CCceEeEeecCCC-Cc---ceEEecccc
Q 002263 231 PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSG-KP---ALRVAMQTR 295 (946)
Q Consensus 231 ~~------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~--~~~~l--p~~~~G~s~d~~g-~~---~~~l~l~tr 295 (946)
+. +--.||-+..+. |++..|+. +|++.+|++ +.+.+ .+.++....+..+ .. .+.+.+
T Consensus 334 ~~~r~~~~Gie~ADSit~D~HK~l~~p~~-----cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l--- 405 (539)
T PLN02590 334 PEYRKFIDGIENADSFNMNAHKWLFANQT-----CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL--- 405 (539)
T ss_pred hhhHHHhcCCccCCEEEECchhhcCcCcC-----EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC---
Confidence 11 113489999999 77777864 678888863 22222 1111110000000 00 011111
Q ss_pred cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---
Q 002263 296 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--- 372 (946)
Q Consensus 296 e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--- 372 (946)
-||. .+ +.+-.+ +.++|.+|++++.++..++|++|.+.|++.++|+++.++.++.|+|+...
T Consensus 406 ---sRr~---------ra-LklW~~--lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~ 470 (539)
T PLN02590 406 ---SRRF---------RS-LKLWMV--LRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDG 470 (539)
T ss_pred ---CCch---------HH-HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCC
Confidence 1332 11 122222 48899999999999999999999999998855999988778888887531
Q ss_pred --------HHHHHHHHHHcCCe-eeee--c-CCeEEEEecc-CCCHHHHHHHHHHHhC
Q 002263 373 --------AHAIASAAYKIEMN-LRVV--D-SNTVTASFDE-TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 --------~~~v~~~L~~~GI~-~~~~--~-~~~lris~~~-~~t~edid~ll~~l~~ 417 (946)
..++.++|.+.|.. +... . .-.+|+++.- .++++|++.+++.+..
T Consensus 471 ~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~ 528 (539)
T PLN02590 471 DEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQK 528 (539)
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 24677777777664 4322 2 2468999855 6779999999998864
No 195
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=5.7e-15 Score=169.41 Aligned_cols=275 Identities=16% Similarity=0.143 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+|++.|.+. ..++.+|++++.+++.. +. +||+||+++..|+++...+...++..|++++++|..
T Consensus 55 ~~~~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~~--l~--~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~ 128 (390)
T PRK08064 55 TREALEDIIAELEGGTK--GFAFASGMAAISTAFLL--LS--KGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNL 128 (390)
T ss_pred hHHHHHHHHHHHhCCCC--eEEECCHHHHHHHHHHH--hC--CCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCH
Confidence 34567789999999874 56778888877765542 23 799999999999998888877677789999998874
Q ss_pred -cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 178 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 178 -~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
++++ ++++|++|++++| |.+|.+.|+++|.++||++|++++||. ..+.+....+.++|+|+++.|+ |.+++|.+
T Consensus 129 ~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~-a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~- 206 (390)
T PRK08064 129 EEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDN-TFLTPLLQKPLDLGADVVLHSATKFLAGHSD- 206 (390)
T ss_pred HHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEEC-CCCcccccCchhhCCcEEEeecceeccCCcc-
Confidence 4555 7789999999998 679999999999999999999999953 3344444456689999999998 77654321
Q ss_pred CCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 254 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 254 GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
--+|++++++ ++.+++... +...+. ..+++ -+ |+...|-+-+.
T Consensus 207 --~laG~~v~~~~~~~~~l~~~-------------------------~~~~g~--~~~~~-----~a--~l~~~gl~tl~ 250 (390)
T PRK08064 207 --VLAGLAVVKDEELAQKLYFL-------------------------QNSFGA--VLGVQ-----DC--WLVLRGLKTLH 250 (390)
T ss_pred --ceeEEEEeCCHHHHHHHHHH-------------------------HHhcCC--CCCHH-----HH--HHHHcccCcHH
Confidence 1247777764 454444110 000010 00001 11 11233333344
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCE-EEcCC-----C-----------CcCeEEEecCCHHHHHHHHHHcCCe-----ee--
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTV-EVQGL-----P-----------FFDTVKVKCADAHAIASAAYKIEMN-----LR-- 388 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~-~~~~~-----~-----------~~~~~~i~~~~~~~v~~~L~~~GI~-----~~-- 388 (946)
...++..+++..+.+.|++.+.+ +++.+ + +...|+|.+++..++.+.+...++. +.
T Consensus 251 ~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~ 330 (390)
T PRK08064 251 VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAV 330 (390)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCC
Confidence 56666778888888888877523 22210 1 1125777776544444545444551 11
Q ss_pred ----------------e-------ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 389 ----------------V-------VDSNTVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 389 ----------------~-------~~~~~lris~~~~~t~edid~ll~~l~~~ 418 (946)
. +.++.||+|++..++++.|++|.++|...
T Consensus 331 ~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 331 ESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred cceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 0 12578999999999999999999999743
No 196
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.69 E-value=1.1e-14 Score=169.45 Aligned_cols=339 Identities=17% Similarity=0.192 Sum_probs=205.2
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r 557 (946)
..+|++.+.+..++..+. ..-.+. +.++ -..+...++.+.|++++. ++. .++.++|+.++++++..+|
T Consensus 58 ~~lGh~~p~v~~ai~~ql-~~l~~~--~~~~------~~~~~~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~AlklAr 127 (442)
T PRK13360 58 VNAGHGRPEIVEAVRAQA-GELDYA--PAFQ------MGHPKAFELANRIAEIAPGGLNH-VFFTNSGSESVDTALKIAL 127 (442)
T ss_pred hccCCCCHHHHHHHHHHH-HhCCCc--ccCC------cCCHHHHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHH
Confidence 356777776666665552 211111 1111 011234478888988873 443 3678899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC-----CC--------CCHHHHHHH
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----GN--------INIEELRKA 611 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~-----g~--------~D~e~L~~~ 611 (946)
.|...+|.++|.+|| ...++||....+....|. .+..+|...+ .. -++++|+++
T Consensus 128 ~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~ 207 (442)
T PRK13360 128 AYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERL 207 (442)
T ss_pred HHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHH
Confidence 886555543456676 567889987665433321 2334444211 00 125688888
Q ss_pred HHhc-CCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEEEeC
Q 002263 612 AEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 678 (946)
Q Consensus 612 i~~~-~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s 678 (946)
+..+ .+++++|++..- +..|++.+ .+++|.++|++||+++++|.++ .|+.+.|.+ -+|++++
T Consensus 208 l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDivt~- 282 (442)
T PRK13360 208 VTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVI----TGFGRLGAPFAAQYFGVTPDLLTC- 282 (442)
T ss_pred HHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCCCccchhhhhcCCCCceeee-
Confidence 8654 367888877643 34677752 2999999999999999999874 455454432 2588866
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
.|.++ +|.-.+|.+.+++++.+.+...... + .... ... .+.|+.+.++++.+.|..+-++++.+
T Consensus 283 -gK~l~----gG~~P~gav~~~~~i~~~~~~~~~~-----~---~~~~--~~~-T~~g~pl~~aaa~a~L~~l~~~~l~~ 346 (442)
T PRK13360 283 -AKGLT----NGAIPMGAVFVSSEIHDAFMQGPEA-----G---IEFF--HGY-TYSGHPLACAAALATLDLYEREGLLT 346 (442)
T ss_pred -eeccc----cCccceEEEEEcHHHHHHhhcCCcc-----c---cccc--cCC-CCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 48773 3322366677787766544211000 0 0000 001 13356667778888888887776554
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 002263 759 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 834 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lr 834 (946)
+..++.++|.+.|++. +... ..|. |.. .. +.+..........+.++.++|.++|+.+... .+.+|
T Consensus 347 ---~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~-~~--~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----~~~lr 415 (442)
T PRK13360 347 ---RAARLAPYWEDALHSLRDAPHVIDIRNL-GLV-GA--VELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----GDILA 415 (442)
T ss_pred ---HHHHHHHHHHHHHHHhhcCCCeeeeecc-ceE-EE--EEEecCCCCcchhHHHHHHHHHHCCcEEEec----CCEEE
Confidence 3446677888888753 2221 1221 221 11 1111110001123567888999999987532 36899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 835 IEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 835 i~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++|+..+|++|||+++++|.++++++
T Consensus 416 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 416 LSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988653
No 197
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=5.5e-15 Score=168.32 Aligned_cols=271 Identities=17% Similarity=0.167 Sum_probs=180.9
Q ss_pred HHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---ccc
Q 002263 103 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 179 (946)
Q Consensus 103 e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l 179 (946)
++++.+|+|.|.+ ++.++.+|++++.++++++ +. +||+||+++..|+.+...+....+.+|+++..++. +++
T Consensus 65 ~Le~~iA~le~~~--~~~~~~sG~~Ai~~~l~al-l~--~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l 139 (394)
T PRK09028 65 AFQAAIVELEGGA--GTALYPSGAAAISNALLSF-LK--AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI 139 (394)
T ss_pred HHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH-hC--CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence 4668999999875 4789999999888877766 33 89999999999988887665445668999998876 346
Q ss_pred cc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCCC
Q 002263 180 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 256 (946)
Q Consensus 180 ~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP 256 (946)
++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++||||++.|+ |+++++ |.-
T Consensus 140 ~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD-~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh---~d~ 215 (394)
T PRK09028 140 RELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLD-NTWASPINSRPFEMGVDISIQAATKYIVGH---SDV 215 (394)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCccccccCCccccCceEEEEeCCeEecCC---CCE
Confidence 66 7889999999998 78999999999999999999999994 45566666788899999999999 777542 111
Q ss_pred ceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHH
Q 002263 257 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 336 (946)
Q Consensus 257 ~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~ 336 (946)
=+|.++.++++.+++-. .++.-|. .. ++. ..|+...|-+-|.-..+
T Consensus 216 ~~G~~~~~~~~~~~l~~-------------------------~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR~~ 261 (394)
T PRK09028 216 MLGTATANEKHWDQLRE-------------------------HSYLMGQ--CT--SPD-----DVYLAMRGLRTLGVRLA 261 (394)
T ss_pred EEEEEECCHHHHHHHHH-------------------------HHHhcCC--CC--CHH-----HHHHHHcccCcHHHHHH
Confidence 14655555544332200 0010111 00 111 11345555555666677
Q ss_pred HHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecC--C---HHHHHHHHHHc--CCeee----
Q 002263 337 RVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCA--D---AHAIASAAYKI--EMNLR---- 388 (946)
Q Consensus 337 ~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~--~---~~~v~~~L~~~--GI~~~---- 388 (946)
+..++|..+++.|++.+.++ |..+ + +..-|+|.++ + +.++.+.|+=. +..+.
T Consensus 262 ~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~s 341 (394)
T PRK09028 262 QHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFES 341 (394)
T ss_pred HHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCcc
Confidence 78899999999999875342 3211 1 1124677665 2 33444444311 22110
Q ss_pred e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 V-----------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 ~-----------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. +.++.||+|++.-+.++=+++|.++|.
T Consensus 342 Lv~~p~~~~~~~~~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~ 386 (394)
T PRK09028 342 LILGVFGINKLRTATNWDFSKPLIRLHIGLEDVDDLIADLEAGFE 386 (394)
T ss_pred eeECCCCcCccCchhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 113568999998765555667766664
No 198
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.69 E-value=9.8e-15 Score=169.83 Aligned_cols=306 Identities=17% Similarity=0.213 Sum_probs=194.4
Q ss_pred HHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC--------
Q 002263 522 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 590 (946)
Q Consensus 522 ~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------- 590 (946)
..++.+.|+++++ ++.+ ++.++|+.++++++..+|.|...+|.+.|.+|| ...++||....+....|.
T Consensus 94 ~~~la~~L~~~~p~~~~~v-~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~ 172 (445)
T PRK09221 94 AFELAERLAELAPGGLDHV-FFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFG 172 (445)
T ss_pred HHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccC
Confidence 4468888888874 3433 567899999999999999887655544466676 568889987665433331
Q ss_pred ----EEEEEcCCC---C---C-------CCCHHHHHHHHHhcC-CCeEEEEEeCC-CcccccccC---HHHHHHHHHHcC
Q 002263 591 ----KIVSVGTDA---K---G-------NINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNG 648 (946)
Q Consensus 591 ----~vv~v~~~~---~---g-------~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g 648 (946)
.+..+|... . + ..+++++++.+++++ +++++|++..- +..|++.++ +++|.++|+++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g 252 (445)
T PRK09221 173 GLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHG 252 (445)
T ss_pred CCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 133344321 0 0 012468888887653 67888888753 456777622 999999999999
Q ss_pred CEEEEecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCC
Q 002263 649 GQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 720 (946)
Q Consensus 649 ~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~ 720 (946)
+++++|+++ .|+.+.|.+ | +|++++ .|.++ +|...+|.+++++++.+.+...... .
T Consensus 253 ~llI~DEV~----tG~GRtG~~~~~~~~gv~PDi~~~--gK~l~----gG~~Pi~av~~~~~i~~~~~~~~~~----~-- 316 (445)
T PRK09221 253 ILLIFDEVI----TGFGRLGAAFAAERFGVTPDIITF--AKGLT----NGAIPMGAVIASDEIYDAFMQGPEY----A-- 316 (445)
T ss_pred CEEEEeehh----hCCCcCchhhHHHhcCCCCCEEEe--ccccc----cCcccceeeEEcHHHHHhhccCccc----c--
Confidence 999999874 455555432 3 588876 48773 4434477788887766544211000 0
Q ss_pred CCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEe
Q 002263 721 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVD 796 (946)
Q Consensus 721 ~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~ 796 (946)
......+| +.|+.+.++++.+.|..+-++++. ++...+.++|+++|++. +... +.| .| .+. .+.
T Consensus 317 ----~~~~~~~T-~~~~pl~~aaa~a~L~~i~~~~l~---~~~~~~g~~l~~~l~~l~~~~~v~~vrg-~G-l~~--~v~ 384 (445)
T PRK09221 317 ----IEFFHGYT-YSAHPVACAAGLATLDIYREEDLF---ERAAELAPYFEDAVHSLKGLPHVIDIRN-IG-LVA--GIE 384 (445)
T ss_pred ----cccccccC-CCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhhccCCCEEEEec-Cc-eEE--EEE
Confidence 00000011 334666677778888888776654 44557788898888764 2211 122 12 111 122
Q ss_pred cccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 797 LRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 797 ~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+............++.++|.++|+.+... .+.||++|+..+|++|||+++++|.++++++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 385 LAPRPGAPGARGYEAFMKCFEKGLLVRYT----GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EecccccccchHHHHHHHHHHCCeEEeec----CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 21100001123567899999999987532 4789999999999999999999999988764
No 199
>PRK06541 hypothetical protein; Provisional
Probab=99.69 E-value=1.3e-14 Score=169.39 Aligned_cols=343 Identities=17% Similarity=0.196 Sum_probs=207.4
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..+|++.+.+..++..+... ..+.....+. .+...++.+.|+++++.+ ...++.++|+.++++++..+|.
T Consensus 64 ~~lGh~~p~v~~Av~~q~~~-~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~ 134 (460)
T PRK06541 64 VQVGHGRAELAEAAAKQAGT-LAFFPLWSYA--------HPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQ 134 (460)
T ss_pred ccCCCCCHHHHHHHHHHHhh-CcCccccccC--------CHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHH
Confidence 45788877776666665322 1111100111 123456778888887532 1236678999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE------------EEEEcCCCCC-----CCC--------HHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKG-----NIN--------IEELRKAA 612 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~------------vv~v~~~~~g-----~~D--------~e~L~~~i 612 (946)
|+...|..+|.+|| ...++||....+....|.. +..+|..... ..| ++++++.+
T Consensus 135 ~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 214 (460)
T PRK06541 135 YFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAI 214 (460)
T ss_pred HHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 86555544466676 5788999988765543321 3334432111 112 46788888
Q ss_pred Hhc-CCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCC
Q 002263 613 EAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNL 679 (946)
Q Consensus 613 ~~~-~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~ 679 (946)
+++ .+++++|+++.- +..|.+.+ .+++|.++|++||+++|+|.++ .|+.+.|.+ | +|++++
T Consensus 215 ~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~----tGfGR~G~~~a~~~~gv~PDivt~-- 288 (460)
T PRK06541 215 EFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVI----CAFGRLGEMFGCERFGYVPDIITC-- 288 (460)
T ss_pred HhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCchhhhhhhcCCCCCEEEe--
Confidence 653 346666666542 56677751 2999999999999999999874 445455432 2 688875
Q ss_pred CcccccCCCCCCC-cceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 680 HKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 680 hK~f~~P~g~GGP-g~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
.|.++ ||. .+|.++++++++..+.... ......+| +.|+...++++.+.|..+..+++.+
T Consensus 289 gK~l~-----~G~~pigav~~~~~i~~~~~~~~-------------~~~~~~~T-~~gnp~~~aaala~l~~l~~~~~~~ 349 (460)
T PRK06541 289 AKGIT-----SGYSPLGAMIASDRLFEPFLDGP-------------TMFLHGYT-FGGHPVSAAVALANLDIFEREGLLD 349 (460)
T ss_pred ccccc-----CCccceeEEEEcHHHHHHhhcCC-------------CccccCCC-CCCCHHHHHHHHHHHHHHHhccHHH
Confidence 48773 443 4777888877655432100 00001111 3345666777888888887766543
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--eccCCCcee-eeEEEeccc---ccccC-C-CCHHHHHHHHHHCCcccCCCCCC
Q 002263 759 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVA-HEFIVDLRG---LKNTA-G-IEPEDVAKRLMDYGFHGPTMSWP 828 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~-~e~v~~~~~---~~~~~-g-~~~~~i~~~L~~~Gi~~~~~~~p 828 (946)
+...+.++|.++|++. +.+. ..|. |..+ .+|+-+... +.... . .....+.++|.++|+.+.... .
T Consensus 350 ---~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~ 424 (460)
T PRK06541 350 ---HVRDNEPAFRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-R 424 (460)
T ss_pred ---HHHHHHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-C
Confidence 4457788999888775 2221 2232 3222 122111100 00000 0 001357788999999975321 1
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
..+.||++|+..+|++|||+++++|.++++++.
T Consensus 425 g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 425 GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 136899999999999999999999999988754
No 200
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=3.7e-15 Score=169.70 Aligned_cols=160 Identities=16% Similarity=0.184 Sum_probs=128.9
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
..+++.+|++.|.+. +.++.+|++|+.++++++ +. +||+||+++..|+.+...+....+..|+++++++. ++
T Consensus 53 ~~lE~~lA~l~g~~~--~~~~~sG~~Ai~~al~al-l~--~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~ 127 (377)
T TIGR01324 53 FALQDAMCELEGGAG--CYLYPSGLAAVTNSILAF-VK--AGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGED 127 (377)
T ss_pred HHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-cC--CCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346789999999764 888999999888887766 33 89999999999988776654445567999998876 45
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|| +.++.+.+..|.++|+||+++|+ |+++++ |+
T Consensus 128 l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD-~t~a~g~~~~pl~~gaDivv~S~tK~l~G~---~d 203 (377)
T TIGR01324 128 IATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMID-NTWAAGLLFKPLEHGVDISIQAGTKYLVGH---SD 203 (377)
T ss_pred HHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCccccCceEEEecCceeccCC---CC
Confidence 666 7889999999998 78999999999999999999999994 45677777778899999999998 887643 22
Q ss_pred CceEEEEEchhhhhc
Q 002263 256 PHAAFLATSQEYKRM 270 (946)
Q Consensus 256 P~~g~l~~~~~~~~~ 270 (946)
-.+|+++++++..++
T Consensus 204 ~~gG~v~~~~~~~~~ 218 (377)
T TIGR01324 204 IMIGTVVANARTWDQ 218 (377)
T ss_pred ceEEEEEeCHHHHHH
Confidence 235888888765543
No 201
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.69 E-value=4.5e-15 Score=170.83 Aligned_cols=304 Identities=15% Similarity=0.123 Sum_probs=191.0
Q ss_pred cccHHHHHHHHHHHHHHhhCCC---cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~---~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+++++++.+|.+ ...+..++|++. +...+++.+. .++++|++++..+..+...+...|++
T Consensus 64 ~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 136 (389)
T PRK05957 64 VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNM--AFMNAILAIT-----DPGDEIILNTPYYFNHEMAITMAGCQ 136 (389)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHH--HHHHHHHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCCE
Confidence 4788888889999999998874 234455555432 2223333321 25688999988887777778889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccc-ccc--cc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVG--LT 665 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~g--l~ 665 (946)
++.++.+.++.+|+++|+++++ +++++|++++| |.+|.+.+ ++++|+++|+++|+++++|.++..- ... ..
T Consensus 137 ~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~ 213 (389)
T PRK05957 137 PILVPTDDNYQLQPEAIEQAIT---PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHF 213 (389)
T ss_pred EEEeecCCCCCcCHHHHHHhcC---cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCcc
Confidence 9999998778899999999996 68999999999 46998862 4999999999999999999985311 111 01
Q ss_pred CC----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 666 SP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 666 ~p----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
.+ ....--|++.++.|.|+. .|.++|++.+++++.+.+.... .+...+++...+.
T Consensus 214 ~~~~~~~~~~~~i~~~S~SK~~g~----~GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~q~--- 272 (389)
T PRK05957 214 SPGSIPGSGNHTISLYSLSKAYGF----ASWRIGYMVIPIHLLEAIKKIQ--------------DTILICPPVVSQY--- 272 (389)
T ss_pred ChhhCCCccCcEEEEecchhhccC----ccceeEEEecCHHHHHHHHHHH--------------hhcccCCCcHHHH---
Confidence 11 111123667778898753 3567999998877665543110 0011111111111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCe-eeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v-~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
++..+|. -+.+-+++..+...++.+++.+.|++.-.+ .+..+++.++ +.++++ .+++..+++++|. ++|
T Consensus 273 -~~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~--~~~~~~-----~~~~~~~~~~~l~~~~g 343 (389)
T PRK05957 273 -AALGALQ-VGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFY--CFLKVN-----TDLNDFELVKQLIREYR 343 (389)
T ss_pred -HHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEE--EEEeCC-----CCCChHHHHHHHHHHCC
Confidence 1112221 122234555555567777888888764111 1111222221 345554 2567889999987 589
Q ss_pred cccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 820 i~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
|.+.. ..|. ..+++||++... +++++++.++.|.+.+++
T Consensus 344 v~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 344 VAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIERLVQGLKT 385 (389)
T ss_pred EEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 98532 2232 246899998543 577777777777666554
No 202
>PLN02880 tyrosine decarboxylase
Probab=99.69 E-value=3.6e-15 Score=174.90 Aligned_cols=360 Identities=13% Similarity=0.064 Sum_probs=211.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCc-c--eeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 104 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~-~--~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~ 104 (946)
.+| +++.+-.++++++.+.-..+.. + ..|.|.-..+...++.+.+.+.+ .|-+. .+.-+.|....++-.+.
T Consensus 54 ~~p--~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~--~~n~~--~~~~~~sp~~~~lE~~v 127 (490)
T PLN02880 54 SAP--NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSA--GLNIV--GFSWITSPAATELEMIV 127 (490)
T ss_pred cCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHH--hhccC--CcccccCcccHHHHHHH
Confidence 355 5677888999999875443321 1 23333322222234444433221 11111 11112455556667778
Q ss_pred HHHHHHHhCCCCc-------ceEEcccHHHHHH-HHHHHhccc-c--C----CCCEEEEcCCCCHHHHHHHHHhhcCCCe
Q 002263 105 QTMIADLTGLPMS-------NASLLDEGTAAAE-AMAMCNNIQ-K--G----KKKTFIIASNCHPQTIDICITRADGFDI 169 (946)
Q Consensus 105 q~~la~L~g~~~~-------~~sl~~~~Ta~~e-a~~la~~~~-~--~----~gd~vvv~~~~Hps~~~~~~~~a~~~gi 169 (946)
-+++++|+|++.. ...+++|||.+.- |+..|+... + + ++-.|++|+..|.|+.+.++.+ +.|-
T Consensus 128 i~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l--Glg~ 205 (490)
T PLN02880 128 LDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA--GIHP 205 (490)
T ss_pred HHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc--CCCH
Confidence 8999999999864 3567778775543 323333211 0 0 1235668999999999987643 3331
Q ss_pred -EEEEecc----------ccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC
Q 002263 170 -KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK 230 (946)
Q Consensus 170 -~v~~~~~----------~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~ 230 (946)
.++.++. ++|++ |.. ...+|+.+.+ +.+|.++|+++|+++|+++|++++|++- ++.+.+.
T Consensus 206 ~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA-~gg~~~~ 284 (490)
T PLN02880 206 ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAA-YAGSACI 284 (490)
T ss_pred HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehh-hHHHHHh
Confidence 1333333 33444 421 2466777877 4599999999999999999999999541 2322222
Q ss_pred C-------CCCccceEEEecc-ccccccCCCCCCceEEEEEchh--hhhcCC---CceEeEeecCCCCcce-EEeccccc
Q 002263 231 P-------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP---GRIVGVSIDSSGKPAL-RVAMQTRE 296 (946)
Q Consensus 231 ~-------~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~--~~~~lp---~~~~G~s~d~~g~~~~-~l~l~tre 296 (946)
. .+-.+||.++.+. |+++.|.+ +|++++|+. +.+.+. +.+.....+..+...+ .+.+
T Consensus 285 ~~~~~~~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i---- 355 (490)
T PLN02880 285 CPEYRHYIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI---- 355 (490)
T ss_pred CHHHHHHhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc----
Confidence 2 1224799999999 77777764 789999863 222221 0000000000000000 0011
Q ss_pred ccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC----
Q 002263 297 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---- 372 (946)
Q Consensus 297 ~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---- 372 (946)
+--||. .++ .+-.+ +..+|.+|++++.++..++++++.+.|++..+++++.++.++.++|+.+.
T Consensus 356 ~~~rr~---------~al-klw~~--l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~ 423 (490)
T PLN02880 356 PLGRRF---------RSL-KLWMV--LRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNN 423 (490)
T ss_pred CCCCcc---------cHH-HHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCC
Confidence 111221 111 11112 36899999999999999999999999988744999987767777776531
Q ss_pred -------HHHHHHHHHHcCC-eeeee--c-CCeEEEEeccCCC-HHHHHHHHHHHhC
Q 002263 373 -------AHAIASAAYKIEM-NLRVV--D-SNTVTASFDETTT-LEDVDKLFIVFAG 417 (946)
Q Consensus 373 -------~~~v~~~L~~~GI-~~~~~--~-~~~lris~~~~~t-~edid~ll~~l~~ 417 (946)
..++.++|.+.|. ++... . ...+|+|++..+| .+|++.+++.+..
T Consensus 424 ~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 424 EDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred hhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 1356666666544 44432 2 3579999988766 5999999999864
No 203
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.69 E-value=7.5e-15 Score=169.74 Aligned_cols=290 Identities=17% Similarity=0.218 Sum_probs=190.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE---------
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK--------- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~--------- 591 (946)
..++.+.|+++++.+.+ ++.++|++++++++.++|.|...++..++.+|+ ...+.||....+..+.|..
T Consensus 83 ~~~la~~l~~~~~~~~v-~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 161 (406)
T PRK12381 83 VLRLAKKLIDATFADRV-FFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPL 161 (406)
T ss_pred HHHHHHHHHhhCCCCeE-EEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCC
Confidence 45788999998877644 677899999999999999886444433456666 5678899887665554432
Q ss_pred ---EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc---cCHHHHHHHHHHcCCEEEEecccccccccc
Q 002263 592 ---IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 664 (946)
Q Consensus 592 ---vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl 664 (946)
++.+|. .|++++++.++ +++++|+++.-+ +.|++. .++++|.++|++||+++++|.++ .|+
T Consensus 162 ~~~~~~~~~-----~d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~----tG~ 229 (406)
T PRK12381 162 PPDIRHAAY-----NDLNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ----TGV 229 (406)
T ss_pred CCCeeEeCC-----CCHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh----hCC
Confidence 222332 48999999996 688888886323 345542 36999999999999999999975 233
Q ss_pred cCCCc------c--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 665 TSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 665 ~~pg~------~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
.+.|. . -+|++++ .|.++ ||..+|.+.+++++.+.+.... . ...++ +
T Consensus 230 gr~G~~~~~~~~~v~pDi~t~--sK~l~-----gG~~ig~~~~~~~~~~~~~~~~-------------~-~~t~~----~ 284 (406)
T PRK12381 230 GRTGELYAYMHYGVTPDVLTT--AKALG-----GGFPIGAMLTTEKCASVMTVGT-------------H-GTTYG----G 284 (406)
T ss_pred CCCcchhhhHhhCCCCCEEEe--hhhhh-----CCCceEEEEEcHHHHhhcCCCC-------------C-CCCCC----C
Confidence 33322 2 3577654 58774 4577899998888776553210 0 01112 2
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 811 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i 811 (946)
+.+.++++.+.|..+..+.+ .++..++.+++.++|++. +.+. ..+ .+ .+ +.+.+.+ ........+
T Consensus 285 ~pl~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg-~G-l~--~~~~l~~---~~~~~~~~~ 354 (406)
T PRK12381 285 NPLASAVAGKVLELINTPEM---LNGVKQRHDWFVERLNTINARYGLFSEIRG-LG-LL--IGCVLNA---EYAGKAKQI 354 (406)
T ss_pred CHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEEec-Ce-EE--EEEEecC---chhhHHHHH
Confidence 34445556666666644433 344456778888888764 2221 111 12 11 2233321 001135688
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 812 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 812 ~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.+.|.++|+.+.... ++.+|++|+..+|++|||++++.|.++++++.+
T Consensus 355 ~~~l~~~Gv~v~~~g---~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 355 SQEAAKAGVMVLIAG---PNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred HHHHHHCCcEEeeCC---CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999999874222 368999999999999999999999999887654
No 204
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=3.7e-15 Score=170.22 Aligned_cols=272 Identities=18% Similarity=0.177 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+++++|.+. +.++.+|++++.+++. + +. +||+||+++..|+++...++..++..|++++++|..
T Consensus 49 ~~~le~~la~l~g~~~--~l~~~sG~~al~~~l~-l-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~ 122 (378)
T TIGR01329 49 RTALESLLAKLDKADR--AFAFSSGMAALDVITR-L-LN--NGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLD 122 (378)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-H-hC--CCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHH
Confidence 4567899999999853 6778888877665433 2 23 899999999999999888877677789999999864
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|+. .++.+....|.++|+|++++|+ |++++|.
T Consensus 123 ~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~-a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~--- 198 (378)
T TIGR01329 123 KVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDN-TMMSPLLCNPLELGADIVYHSATKFLAGHS--- 198 (378)
T ss_pred HHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEEC-CCcccccCChhhcCCcEEEEecceeccCCc---
Confidence 4555 7889999999998 779999999999999999999999953 3444545566788999999998 7775432
Q ss_pred CCceEEEEEchh-hhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~~-~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
+.-+|+++++++ +.+++.. +++..|+ +. ++. .+ |+...+.+-+..
T Consensus 199 ~~~~G~v~~~~~~~~~~~~~-------------------------~~~~~G~---~~-~~~---~a--~l~~~~l~tl~~ 244 (378)
T TIGR01329 199 DVMAGVLAVKGEEIAKKVYF-------------------------LQNSTGS---GL-APF---DC--WLLLRGIKTLAI 244 (378)
T ss_pred cceeEEEEeCcHHHHHHHHH-------------------------HHHhcCC---cC-CHH---HH--HHHHccCCCHHH
Confidence 112688888654 3233310 0110110 00 111 11 234555566777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCE-EEc-C---C-C-----------CcCeEEEecCC---HHHHHHHHHHcCCeeee----
Q 002263 334 IAQRVHGLAGTFALGLKKLGTV-EVQ-G---L-P-----------FFDTVKVKCAD---AHAIASAAYKIEMNLRV---- 389 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~-~~~-~---~-~-----------~~~~~~i~~~~---~~~v~~~L~~~GI~~~~---- 389 (946)
..++...++..+++.|++...+ ++. . . + +...|+|.+.+ +.++.+.|...+|.++.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~ 324 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVN 324 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCC
Confidence 7778888899999999876423 221 1 0 1 11357777755 56888888766654320
Q ss_pred -----------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 -----------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 -----------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++.-+.++=+++|.++|.
T Consensus 325 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 374 (378)
T TIGR01329 325 SLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFV 374 (378)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 124678999887665555566666664
No 205
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.69 E-value=9.1e-15 Score=166.87 Aligned_cols=214 Identities=22% Similarity=0.192 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+|+++|.+. +.++++|++++.+++.++. . +||+|+++...|..+...++..++..|++++++|.+
T Consensus 41 ~~~~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~-~--~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 115 (369)
T cd00614 41 TVDALEKKLAALEGGEA--ALAFSSGMAAISTVLLALL-K--AGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDP 115 (369)
T ss_pred hHHHHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHHc-C--CCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCH
Confidence 34567789999999865 7788999988887777652 3 799999999999998887776666789999999875
Q ss_pred -cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 178 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 178 -~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
++++ +++++++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....+.++|+|++++|. |.++++
T Consensus 116 ~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD-~t~~~~~~~~~~~~g~Divv~S~tK~l~g~--- 191 (369)
T cd00614 116 EALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVD-NTFATPYLQRPLELGADIVVHSATKYIGGH--- 191 (369)
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcchhcCChhhhCCcEEEeccceeccCC---
Confidence 4555 7778999999988 78999999999999999999999994 45566655567789999999998 777532
Q ss_pred CCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 254 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 254 GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
|..-+|++.+++ ++.+++.. .++.-|+ .. +++ .+. +...+-+.+.
T Consensus 192 ~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~g~-~~---~p~---~a~--~~l~~l~tl~ 237 (369)
T cd00614 192 SDVIAGVVVGSGEALIQRLRF-------------------------LRLALGT-IL---SPF---DAW--LLLRGLKTLP 237 (369)
T ss_pred CCceEEEEEeCcHHHHHHHHH-------------------------HHHhhCC-CC---CHH---HHH--HHHcCCCCHH
Confidence 223368888876 66554410 0011111 11 121 111 2233445566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
...++..+++.++++.|++.++++
T Consensus 238 ~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 238 LRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 677888999999999999885453
No 206
>PLN00175 aminotransferase family protein; Provisional
Probab=99.69 E-value=5.8e-15 Score=170.98 Aligned_cols=347 Identities=17% Similarity=0.174 Sum_probs=210.1
Q ss_pred HHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCcccc-ccCCCCcccccccHHHHHHHHHHHHHHhhCCC--c
Q 002263 461 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--S 537 (946)
Q Consensus 461 ~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~-~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~--~ 537 (946)
.++.+.+++.. .+++.|+.|.+..++............. ..+.|.+ .+|..++...+.+++.+..|.+ .
T Consensus 43 ~~~~~~~~~~~-----~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~ 114 (413)
T PLN00175 43 IFTQMSSLAIK-----HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYAR---GFGVPELNSAIAERFKKDTGLVVDP 114 (413)
T ss_pred HHHHHHHHhhc-----CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCC---CCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 34555555432 2467788877765543221111000000 1123433 4677777777777777776754 3
Q ss_pred c-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-CCCCCHHHHHHHHHhc
Q 002263 538 F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEAN 615 (946)
Q Consensus 538 ~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~g~~D~e~L~~~i~~~ 615 (946)
. .+..++|++. +..++++.+. .++++|++++..|..+...+...|.+++.+++++ ++.+|+++|++++.
T Consensus 115 ~~~I~vt~G~~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-- 185 (413)
T PLN00175 115 EKEVTVTSGCTE--AIAATILGLI-----NPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-- 185 (413)
T ss_pred CCCEEEeCCHHH--HHHHHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC--
Confidence 2 3555555542 2222333321 2568999999888777778899999999999875 47899999999996
Q ss_pred CCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-ccC----CCccCCCEEEeCCCcccccC
Q 002263 616 RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LTS----PGYIGADVCHLNLHKTFCIP 686 (946)
Q Consensus 616 ~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l~~----pg~~GaDi~~~s~hK~f~~P 686 (946)
+++++|++++| |.+|.+- .++++|+++|+++|+++++|.++..-. .+ ... ++..+-.|++.++.|+|+.|
T Consensus 186 -~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 186 -SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred -cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 68899999999 5789884 258899999999999999999863211 11 001 11122346678889998654
Q ss_pred CCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHH
Q 002263 687 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 766 (946)
Q Consensus 687 ~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~ 766 (946)
|.++|++.+++++...+... +.....+.+...+ .++..+|. .+.+-+++..+....+
T Consensus 265 ----G~RiG~~v~~~~l~~~l~~~--------------~~~~~~~~s~~~Q----~a~~~~l~-~~~~~~~~~~~~~~~~ 321 (413)
T PLN00175 265 ----GWKIGWAIAPPHLTWGVRQA--------------HSFLTFATATPMQ----WAAVAALR-APESYYEELKRDYSAK 321 (413)
T ss_pred ----chheeeeEeCHHHHHHHHHH--------------HhhccCCCCHHHH----HHHHHHHh-CCHHHHHHHHHHHHHH
Confidence 78899999987765543210 0001122211111 11222332 2333355666666678
Q ss_pred HHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCC-CHHHHHHHHH-HCCccc-CCCCC-C----CCCEEEEEc
Q 002263 767 ANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM-DYGFHG-PTMSW-P----VPGTLMIEP 837 (946)
Q Consensus 767 a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~-~~~~i~~~L~-~~Gi~~-~~~~~-p----~~~~lri~~ 837 (946)
.+++.+.|++. +.+. .+++.++ +++++.+ .+. +..++++.|. ++|+.+ |...| + ..+.+||++
T Consensus 322 ~~~l~~~L~~~g~~~~--~p~g~~f--~~~~~~~----~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~ 393 (413)
T PLN00175 322 KDILVEGLKEVGFKVY--PSSGTYF--VMVDHTP----FGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF 393 (413)
T ss_pred HHHHHHHHHHCCCeec--CCCeeEE--EEEeccc----cCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE
Confidence 88899999875 3331 2223222 3455431 133 4678999887 569874 33223 1 246899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 002263 838 TESESKEELDRYCDALISIRE 858 (946)
Q Consensus 838 t~~~t~~eid~~~~aL~~i~~ 858 (946)
.. +++++++.++.|.+.++
T Consensus 394 ~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 394 CK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred cC--CHHHHHHHHHHHHHHHh
Confidence 73 68888888888876643
No 207
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.69 E-value=6.4e-15 Score=169.19 Aligned_cols=296 Identities=14% Similarity=0.129 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
...++++.+++++|.+.+ +..++|.++..++++++. +++|.||+++..|++....+.+.+.++++++.+
T Consensus 44 ~~~~LE~~lA~~~g~e~a-l~~~sG~~a~~~~i~~l~--------~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-- 112 (392)
T PLN03227 44 AHLELEQCMAEFLGTESA-ILYSDGASTTSSTVAAFA--------KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-- 112 (392)
T ss_pred HHHHHHHHHHHHhCCCcE-EEecCcHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCC--
Confidence 466889999999998754 555566555544444321 256899999999988777777888888888763
Q ss_pred CCCCHHHHHHHHHhc-----------CCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCC-
Q 002263 601 GNINIEELRKAAEAN-----------RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 667 (946)
Q Consensus 601 g~~D~e~L~~~i~~~-----------~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p- 667 (946)
|++++++.++.. .++++.|++..+ |..|.+. |+++|+++|++||+++++|+++. ++.+.+.
T Consensus 113 ---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~-~l~~i~~l~~~~g~~livDe~~~--~g~~g~~G 186 (392)
T PLN03227 113 ---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA-PLKELVALKEEFHYRLILDESFS--FGTLGKSG 186 (392)
T ss_pred ---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc-CHHHHHHHHHHcCCEEEEECccc--ccccCCCC
Confidence 455555544321 136888888877 5678887 79999999999999999999875 2222221
Q ss_pred ----------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 668 ----------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 668 ----------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
...|+|+++++++|.+ ||..|++++++++.+.+... +. ....+++. +
T Consensus 187 ~g~~~~~g~~p~~~~Div~~slsk~~-------g~~gg~v~~~~~~~~~~~~~--~~------------~~~~~~~~--~ 243 (392)
T PLN03227 187 RGSLEHAGLKPMVHAEIVTFSLENAF-------GSVGGMTVGSEEVVDHQRLS--GS------------GYCFSASA--P 243 (392)
T ss_pred CcHHHHcCCCCCCCceEEEeechhhh-------hccCcEEecCHHHHHHHHHh--Cc------------CccccCCC--C
Confidence 1346799999988866 35567777777655432110 00 00111110 1
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCee--ecc-------CCCceeeeEEEecccccccC---
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRG-------VNGTVAHEFIVDLRGLKNTA--- 804 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~--~~~-------~~~~~~~e~v~~~~~~~~~~--- 804 (946)
+..+.++.+.+..+-. ..+..++..+++++|+++|++. +... ..| ..++. +.+.+.+.+...
T Consensus 244 p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i---~~i~~~~~~~~~~~~ 318 (392)
T PLN03227 244 PFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPI---IYLRLSDQEATRRTD 318 (392)
T ss_pred HHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCE---EEEEeCCHHHhhhhh
Confidence 2122223223322211 1234455678899999999752 2210 000 01121 223332100000
Q ss_pred -CCCHHHHHHHHHHCCcccCCC------CCC-C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 805 -GIEPEDVAKRLMDYGFHGPTM------SWP-V-PGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 805 -g~~~~~i~~~L~~~Gi~~~~~------~~p-~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.....++.++|.++|+.+... .+| + +..+|++++..+|++|||+++++|+++++++.
T Consensus 319 ~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 319 ETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred hhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 001258999999999986321 112 1 57899999999999999999999999987753
No 208
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.68 E-value=2.3e-15 Score=172.41 Aligned_cols=277 Identities=13% Similarity=0.097 Sum_probs=177.5
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc--------------------------cC--CCCEEEEcCCCC
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ--------------------------KG--KKKTFIIASNCH 153 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~--------------------------~~--~gd~vvv~~~~H 153 (946)
..+.+.+.+|+|++.+|+-..+|. .|..++.+|+.-. |+ +||+|+.-+..|
T Consensus 98 ~l~~~ra~~lf~a~~anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~ 176 (493)
T PRK13580 98 WEAAEHAKELFGAEHAYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDS 176 (493)
T ss_pred HHHHHHHHHHhCCCcccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCC
Confidence 345678899999999888777544 4555555555310 00 178888554333
Q ss_pred --------HHHHHHHHHhhcCCCeEEE--Eeccccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEec
Q 002263 154 --------PQTIDICITRADGFDIKVV--VSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATD 222 (946)
Q Consensus 154 --------ps~~~~~~~~a~~~gi~v~--~~~~~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~ 222 (946)
+.+.......+..+|++-. .+|++++++ +.++++.|++++.+.+|.+.|+++|.++||++|++++|++
T Consensus 177 GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~- 255 (493)
T PRK13580 177 GGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDM- 255 (493)
T ss_pred CCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEEC-
Confidence 2333222111233444321 256677777 7778888888875444668899999999999999999932
Q ss_pred CccccCCC--------CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecc
Q 002263 223 LLALTILK--------PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ 293 (946)
Q Consensus 223 ~~al~~l~--------~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~ 293 (946)
.+++|++. .| ..++||+++++ |+|+ ||..||+++++++.++|. . ..+ |.
T Consensus 256 AH~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL~------GP~GG~I~~~~~l~~~L~--------~--a~P-~i---- 313 (493)
T PRK13580 256 AHFAGLVAGKVFTGDEDP-VPHADIVTTTTHKTLR------GPRGGLVLAKKEYADAVD--------K--GCP-LV---- 313 (493)
T ss_pred chhhceeccccchhhcCC-CCCCcEEEeCChhhcc------CCCeEEEEecHHHHHHHh--------h--CCC-cc----
Confidence 33555442 12 23799999998 7774 355689999998877661 0 001 10
Q ss_pred cccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcCeEEEecCC
Q 002263 294 TREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD 372 (946)
Q Consensus 294 tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~~ 372 (946)
.+|+.. +...+...++ ..+...+.++.++++.+++++|++.|.+.| +.++. ....+.+.|.+.+
T Consensus 314 ---------~gg~l~---p~iAA~avAl--~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~ 378 (493)
T PRK13580 314 ---------LGGPLP---HVMAAKAVAL--AEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTS 378 (493)
T ss_pred ---------cCCCcc---HHHHHHHHHH--HHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCC
Confidence 011111 2222222222 222223346789999999999999999998 88863 2334566666654
Q ss_pred ---H-HHHHHHHHHcCCeeeee----------cCCeEEEEeccC----CCHHHHHHHHHHHhC
Q 002263 373 ---A-HAIASAAYKIEMNLRVV----------DSNTVTASFDET----TTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 ---~-~~v~~~L~~~GI~~~~~----------~~~~lris~~~~----~t~edid~ll~~l~~ 417 (946)
+ ..+.++|.+.||.+... ....||++++.. ++++|++++++.|..
T Consensus 379 ~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~ 441 (493)
T PRK13580 379 FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVK 441 (493)
T ss_pred HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHH
Confidence 3 46778999999987532 146799999994 469999999999963
No 209
>PLN02822 serine palmitoyltransferase
Probab=99.68 E-value=7.9e-15 Score=172.32 Aligned_cols=299 Identities=14% Similarity=0.137 Sum_probs=191.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
-|..+...++++.+++++|.+...++. +|.++.++ ++++|. ++++.|++...+|++...++.+.|.+++.+
T Consensus 150 yg~~~~~~~Lee~La~~~~~~~~i~~s-~G~~a~~s---ai~a~~-----~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~ 220 (481)
T PLN02822 150 YGTIDVHLDCETKIAKFLGTPDSILYS-YGLSTIFS---VIPAFC-----KKGDIIVADEGVHWGIQNGLYLSRSTIVYF 220 (481)
T ss_pred ccCHHHHHHHHHHHHHHhCCCCEEEEC-CHHHHHHH---HHHHhC-----CCCCEEEEeCCccHHHHHHHHHcCCeEEEE
Confidence 466777889999999999977543444 44444433 444442 256888888888888777888899999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcC------CCe-EEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCC
Q 002263 596 GTDAKGNINIEELRKAAEANR------DNL-STLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 667 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~------~~t-~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p 667 (946)
+.+ |.++++..+++.. +++ ++|++..+ +.+|.+. ++++|+++|++||+++++|.++. ++.+.+.
T Consensus 221 ~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~-~L~~i~~l~~k~~~~LIvDEa~s--~gvlG~~ 292 (481)
T PLN02822 221 KHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIA-PLDEIVRLKEKYRFRVLLDESNS--FGVLGKS 292 (481)
T ss_pred CCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCcc--ccccCCC
Confidence 874 6677777665421 234 67777666 4689988 79999999999999999999975 3333322
Q ss_pred C-----cc-----CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 668 G-----YI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 668 g-----~~-----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
| .+ ..|+++.+++|+|+++ | |++++++++++.+.... .....+++. .
T Consensus 293 G~G~~e~~~v~~~~~dii~~s~sKalg~~------G-G~i~g~~~ii~~~~~~~--------------~~~~fsa~l--P 349 (481)
T PLN02822 293 GRGLSEHFGVPIEKIDIITAAMGHALATE------G-GFCTGSARVVDHQRLSS--------------SGYVFSASL--P 349 (481)
T ss_pred CCChHHHcCCCCCCCeEEEecchhhhhhC------C-eEEEcCHHHHHHHHhcC--------------Cceeecccc--C
Confidence 2 11 4689999999998532 2 68888877665432110 000112110 1
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEeccccccc-CC--CCHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-AG--IEPEDVA 812 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~-~g--~~~~~i~ 812 (946)
...+.++.+.|..+.. ..+..++..++.+++.++|++. +.+..+ ..++.. .+.++..... .+ ....+++
T Consensus 350 p~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~spi~---~l~l~~~~~~~~~~~~~~~~~~ 423 (481)
T PLN02822 350 PYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIGSN-TLSPIV---FLHLEKSTGSAKEDLSLLEHIA 423 (481)
T ss_pred HHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCCCEE---EEEeCCCcccccchHHHHHHHH
Confidence 2223333345544432 1345566778899999999875 333211 123332 2333210000 00 0136799
Q ss_pred HHHH-HCCcccCCCCCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 813 KRLM-DYGFHGPTMSWP------VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 813 ~~L~-~~Gi~~~~~~~p------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++|. ++|+.+....+| .+..+|++++..+|++||+++++.|++++.++
T Consensus 424 ~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 424 DRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred HHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 9997 889986432222 23579999999999999999999999987765
No 210
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.68 E-value=1.8e-14 Score=169.35 Aligned_cols=341 Identities=14% Similarity=0.168 Sum_probs=206.1
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC-CCc-ccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDS-FSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G-~~~-~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.||++.+.+..++..+.... .+ ++++. .+..+...++.+.|++++. .+. ..++.++|++++++++.++|.
T Consensus 102 ~lGh~hp~v~~Av~~ql~~~-~~--~~~~~-----~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~ 173 (504)
T PLN02760 102 ALGGSEPRLVAAATEQLNKL-PF--YHSFW-----NRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWY 173 (504)
T ss_pred ccCCCCHHHHHHHHHHHhhc-cc--eeccc-----ccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 56777666666655553211 11 11110 1122345578888888853 221 236678999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE------------EEEEcCCCC-------C------CCCHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAK-------G------NINIEELRKAA 612 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~------------vv~v~~~~~-------g------~~D~e~L~~~i 612 (946)
|...+|..+|++|| ...++||....+..+.|.+ +..++.+.. . ....++|++++
T Consensus 174 ~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l 253 (504)
T PLN02760 174 YNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLI 253 (504)
T ss_pred HHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHH
Confidence 87555644456666 5678999877665544432 223332110 0 01235678777
Q ss_pred Hh-cCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCC
Q 002263 613 EA-NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNL 679 (946)
Q Consensus 613 ~~-~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~ 679 (946)
.+ +.+++++|++..- +..|++.++ +++|.++|++||+++|+|.+ +.||.+.|.+ | +|++++
T Consensus 254 ~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV----~TGfGRtG~~~a~e~~gv~PDivtl-- 327 (504)
T PLN02760 254 LKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEV----ICAFGRLGTMFGCDKYNIKPDLVSL-- 327 (504)
T ss_pred HhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecch----hhCCcccchhhHHHhcCCCCcEEEe--
Confidence 53 3356777777643 445777632 99999999999999999986 4566666543 2 688877
Q ss_pred CcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHH
Q 002263 680 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 759 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~ 759 (946)
.|.++ +|.-.+|.+++++++.+.+.... . ......... .+.|+.+.++++.+.|..+-++++.+
T Consensus 328 gK~lg----gG~~PigAv~~~~~i~d~~~~~~-----~-----~~~~~~h~~-T~~gnPl~~Aaala~Le~i~~~~l~~- 391 (504)
T PLN02760 328 AKALS----SAYMPIGAVLVSPEISDVIHSQS-----N-----KLGSFAHGF-TYSGHPVSCAVALEALKIYKERNIPE- 391 (504)
T ss_pred ccccc----CCccccceEeecHHHHhhhhccc-----c-----cccCcccCC-CCCCCHHHHHHHHHHHHHHHhCCHHH-
Confidence 48773 33323566778877766542110 0 000000111 13456777888888898887765544
Q ss_pred HHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEeccccccc-CCC-----CHHHHHHHHHHCCcccCCCCCCC
Q 002263 760 SKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNT-AGI-----EPEDVAKRLMDYGFHGPTMSWPV 829 (946)
Q Consensus 760 ~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~-~g~-----~~~~i~~~L~~~Gi~~~~~~~p~ 829 (946)
+...+.++|.++|++. +.++ +.|. |.. +.+.+..-+.. ... -...+.+.|.++|+.+...
T Consensus 392 --~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~---~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---- 461 (504)
T PLN02760 392 --HVNKIAPRFQDGIKAFSGSPIIGEIRGT-GLI---LGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA---- 461 (504)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCeeeEEeC-ceE---EEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----
Confidence 4446778888888764 2221 2221 222 12222110000 000 1456888899999987532
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 830 PGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 830 ~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+.+|++|+..+|++|||+++++++++++++.
T Consensus 462 g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 462 GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999988763
No 211
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=1.3e-14 Score=169.40 Aligned_cols=308 Identities=16% Similarity=0.198 Sum_probs=196.4
Q ss_pred HHHHHHHHHHhhC-------CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC---
Q 002263 522 FNNLGEWLCTITG-------FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--- 590 (946)
Q Consensus 522 ~~el~~~la~l~G-------~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~--- 590 (946)
..++.+.|++++. ++. .++.++||.++++++..+|.|...+|.++|.+|| ...++||....+....|.
T Consensus 109 ~~~lae~L~~~~p~~~~~~~~~~-v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~ 187 (472)
T PRK08742 109 AVQLAEQLLAIAPRQDGRAPLSK-VFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLY 187 (472)
T ss_pred HHHHHHHHHHhCCCcccCCCCCE-EEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCccc
Confidence 4477888888874 222 4678899999999999999987666755566776 567899988776554332
Q ss_pred ---------EEEEEcCCCC-----C-------CCCHHHHHHHHHhcCCCeEEEEEeC-C-Cccccccc---CHHHHHHHH
Q 002263 591 ---------KIVSVGTDAK-----G-------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKII 644 (946)
Q Consensus 591 ---------~vv~v~~~~~-----g-------~~D~e~L~~~i~~~~~~t~~vvvt~-P-n~~G~~~~---~i~~I~~ia 644 (946)
.+..+|.... + ..+++.+++.++++.+++++|+++. . +..|++.+ .++++.++|
T Consensus 188 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc 267 (472)
T PRK08742 188 RRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELC 267 (472)
T ss_pred ccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHH
Confidence 1334443211 1 1146788888876567899998885 2 45576542 599999999
Q ss_pred HHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 645 HDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 645 ~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
++||+++|+|.+ +.|+.+.|.+ | +|++++ .|.++ +|--.+|.+++++++++.+....
T Consensus 268 ~~~gillI~DEV----~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~----gG~~Plaav~~~~ei~~~~~~~~----- 332 (472)
T PRK08742 268 DAHGAFLIADEI----ATGFGRTGTLFACEQAGVMPDLLCL--SKGLT----GGFLPLSAVLATQQLYDAFLDDS----- 332 (472)
T ss_pred HHcCCEEEEech----hhCCCCCccchHHHhcCCCCCEEEE--ccccc----CCCCCcceeeccHHHHHHhhccC-----
Confidence 999999999986 5677777643 2 699988 48773 33224777777877655432110
Q ss_pred CCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCce-ee
Q 002263 717 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTV-AH 791 (946)
Q Consensus 717 d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~-~~ 791 (946)
..... ...+.+.|+.+.++++.+.|..+-++++.+.++ ...++|.+.++.. +.++ ..|. |.. ..
T Consensus 333 ------~~~~~-~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~---~~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~gi 401 (472)
T PRK08742 333 ------RERAF-LHSHSYTGNPLACAAALATLDIFADDDVIARNQ---PTAARMTQLAAQIGEHPHVADVRQA-GMVVAF 401 (472)
T ss_pred ------ccCcc-CcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHhcCCCeeeEecc-ceEEEE
Confidence 00000 001113457777888889999998887765444 3445555444332 2221 2232 322 11
Q ss_pred eEEEecccccccCCC--C-HHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 792 EFIVDLRGLKNTAGI--E-PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 792 e~v~~~~~~~~~~g~--~-~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+++-+-.+ +..... . ...+.+++.++|+.+.. .+++||+.|+...|++|||++++.|.++++++.
T Consensus 402 el~~~~~~-~~~~~~~~~~~~~~~~~~~~~Gll~~~----~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 402 ELTRGGNK-RTPFPPAARVGLHAYRAALARGVVLRP----LGDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EeccCccc-cccCCchhHHHHHHHHHHHHCCeEEEe----cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 22211100 000000 1 25678888999998743 247999999999999999999999999988754
No 212
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=1.3e-14 Score=169.60 Aligned_cols=342 Identities=13% Similarity=0.154 Sum_probs=214.0
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
.+|+|.+.+..++..+. ..-.+....-+ ..+...++.+.|++++... ...++.++|+.++++++..+|.|
T Consensus 69 ~lGh~~p~v~~Ai~~ql-~~l~~~~~~~~--------~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~ 139 (460)
T PRK06916 69 VHGHQVPELDEAIREQL-NKIAHSTLLGL--------ANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQY 139 (460)
T ss_pred hcCCCCHHHHHHHHHHH-HhCCCcccccc--------CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 46888777766666653 21111110001 0123457888888887532 23477889999999999999988
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC-----C-------CCCHHHHHHHHHh
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAAEA 614 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~-----g-------~~D~e~L~~~i~~ 614 (946)
...+|.++|.+|| ...++||....+..+.|- .+..+|.... + ..|++++++.++.
T Consensus 140 ~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 219 (460)
T PRK06916 140 WQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE 219 (460)
T ss_pred HHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh
Confidence 7666655666776 567899988766554432 1334443210 0 1246778888876
Q ss_pred cCCCeEEEEEeC-C-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCc
Q 002263 615 NRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHK 681 (946)
Q Consensus 615 ~~~~t~~vvvt~-P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK 681 (946)
+.+++++|+++. . +..|++.+ .++++.++|+++|+++|+|.+ +.|+.+.|.+ | +|++++ .|
T Consensus 220 ~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~TG~GRtG~~~a~~~~gv~PDiv~~--gK 293 (460)
T PRK06916 220 KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEV----ATGFGRTGKMFACEHENVTPDIMTA--GK 293 (460)
T ss_pred CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeech----hhCCCcCchhhHHHhcCCCCCeeee--eh
Confidence 668899999986 3 45576642 489999999999999999986 4566666643 2 699877 48
Q ss_pred ccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHH
Q 002263 682 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 761 (946)
Q Consensus 682 ~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~ 761 (946)
.++ +|.-.+|.+++++++.+.+....- ......... .+.|+.+.++++.+.|..+.++++.+
T Consensus 294 ~l~----gG~~Pi~av~~~~ei~~~~~~~~~----------~~~~~~~~~-T~~gnpl~~aaa~a~l~~l~~~~l~~--- 355 (460)
T PRK06916 294 GLT----GGYLPIAITVTTDEIYNAFYGDYE----------EQKTFFHGH-SYTGNPLGCAVALANLELYEKTNLIE--- 355 (460)
T ss_pred hhh----cCccccceeeecHHHHHHhhcccc----------ccCccccCC-CCCCCHHHHHHHHHHHHHHHhccHHH---
Confidence 773 332357788888776654321000 000000001 13356777778888888887776654
Q ss_pred HHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEecc-cccccCC--CC-HHHHHHHHHHCCcccCCCCCCCCCEE
Q 002263 762 IAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR-GLKNTAG--IE-PEDVAKRLMDYGFHGPTMSWPVPGTL 833 (946)
Q Consensus 762 ~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~-~~~~~~g--~~-~~~i~~~L~~~Gi~~~~~~~p~~~~l 833 (946)
+...+.++|.+.|++. +..+ ..|. |.. ..+-+..+ ..+.... .. ...+.+.|.++|+++.. .++.+
T Consensus 356 ~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Glm-~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----~g~~l 429 (460)
T PRK06916 356 QVARKTEYVATQLEDLFALKHVGDIRQL-GLM-VGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRP----LGNTI 429 (460)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeecC-Cce-eeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEe----cCCEE
Confidence 4446778888888764 2221 2232 322 11222111 0000000 11 35788889999998743 24789
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 834 MIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 834 ri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
|+.|+..+|++|||+++++|.++++++.
T Consensus 430 ~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 430 VFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999987643
No 213
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.68 E-value=1.1e-14 Score=164.21 Aligned_cols=312 Identities=16% Similarity=0.134 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHhcC--CcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCC
Q 002263 39 SQMIEHMQKLASMN--KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM 116 (946)
Q Consensus 39 ~e~~~~~~~l~~~n--~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~ 116 (946)
+..++|+++--+.. ...++|+|...+|..+.+... .+.. |+ |..+...++++.+|+++|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ylgl~~~~~~~~~~~~-~~~~-------~~--------g~~~~~~~Le~~lA~~~g~~~ 71 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLYDLTGLAGGFKIDEEDLE-LLET-------YV--------GPAIFEEKVQELGREHLGGPE 71 (346)
T ss_pred HHHHHHHHHHHhccCCccccccccCCCChhHHHHHHH-HHHH-------hc--------CCHHHHHHHHHHHHHHcCCCc
Confidence 45677777655555 568899999987655555442 3332 21 344778889999999999988
Q ss_pred cceEEcccHHHHHHHHHHHhccccCCCCEEEEc---CCCCHHHHHHHHHhhcCCCeEEEEe-ccccccccCCCEeEEEEE
Q 002263 117 SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA---SNCHPQTIDICITRADGFDIKVVVS-DLKDIDYKSGDVCGVLVQ 192 (946)
Q Consensus 117 ~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~---~~~Hps~~~~~~~~a~~~gi~v~~~-~~~~l~~i~~~t~~v~v~ 192 (946)
.++.+++||+.+..+++.++. . +||+|+++ ...|+++...++. .|.++... ++++++. .+++++|+++
T Consensus 72 e~ilv~~gg~~a~~~~~~al~-~--~gd~Vli~~~d~p~~~s~~~~~~l----~ga~~~~~~~l~~l~~-~~~~~lIiit 143 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALE-P--PGRKVVHYLPEKPAHPSIPRSCKL----AGAEYFESDELSELKK-IDGTSLVVIT 143 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhC-C--CCCEEEECCCCCCCchhHHHHHHH----cCCEEeccCCHHHHhh-CcCceEEEEE
Confidence 889999999988888777663 3 89999964 4699998887643 46665422 3344332 3467888888
Q ss_pred cCCCceee---cchHHHHHHHHhCCcEEEEEecCccccCCC-----CCCCccceEEEecc-ccccccCCCCCCceEEEEE
Q 002263 193 YPGTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT 263 (946)
Q Consensus 193 ~pn~~G~i---~di~~i~~~a~~~gal~~v~a~~~al~~l~-----~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~ 263 (946)
.++++|.+ .|+++|+++|+++|++++|| +.++.+... +..++|+|++++|. |.+ .|+.+||+++
T Consensus 144 g~s~~G~v~~~~~L~~i~~la~~~~~~livD-EAy~~~~~~~~~~~~~~~~~~divv~s~SKal------aG~r~G~v~~ 216 (346)
T TIGR03576 144 GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVD-DASGARVRRLYGQPPALDLGADLVVTSTDKLM------DGPRGGLLAG 216 (346)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEEE-CCccccccccCCCCCHHHcCCcEEEeccchhc------cccceEEEEe
Confidence 77889998 79999999999999999994 344443211 11346789999987 754 3456789999
Q ss_pred chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH-HHHHHHHHHHHHhChhhHHHHHHHHHHHH
Q 002263 264 SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA-LLANMAAMYAVYHGPEGLKTIAQRVHGLA 342 (946)
Q Consensus 264 ~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~-l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a 342 (946)
++++++.|... .+ +.++|.+++ ..+..+++ ..+ ..+.+.++..++.
T Consensus 217 ~~~li~~l~~~----------~~------------------~~~~s~~~~~~~aa~~aL--~~~---~~~~~~~~l~~r~ 263 (346)
T TIGR03576 217 RKELVDKIKSV----------GE------------------QFGLEAQAPLLAAVVRAL--EEF---ELSRIRDAFKRKE 263 (346)
T ss_pred CHHHHHHHHHh----------hc------------------CcccCccHHHHHHHHHHH--hhc---cHHHHHHHHHHHH
Confidence 98887766110 00 001111122 22222222 222 1345566777777
Q ss_pred HHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeeec-----CCeEEEEeccCC-CHHHHHHHHH
Q 002263 343 GTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-----SNTVTASFDETT-TLEDVDKLFI 413 (946)
Q Consensus 343 ~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~-----~~~lris~~~~~-t~edid~ll~ 413 (946)
+++.+.+++++ +...+ .+=+.++++. ...+.+.|.++||.++... ++.+|+|+.... ++.+.+.+++
T Consensus 264 ~~~~~~l~~~~---~~~~~-~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~ 339 (346)
T TIGR03576 264 EVYLRLFDKLN---VERTP-TGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVE 339 (346)
T ss_pred HHHHHHHHhCC---CCcCC-CeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHH
Confidence 77777777443 33211 1113345542 3456666777899886531 578999988543 3347999999
Q ss_pred HHhCC
Q 002263 414 VFAGG 418 (946)
Q Consensus 414 ~l~~~ 418 (946)
+|+..
T Consensus 340 al~~~ 344 (346)
T TIGR03576 340 AVKDS 344 (346)
T ss_pred HHHhc
Confidence 99753
No 214
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.68 E-value=9.2e-15 Score=168.84 Aligned_cols=296 Identities=12% Similarity=0.119 Sum_probs=188.1
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Cc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|. +. ..+..++|++.. ..++++.+. .++++|+++...++.+...+...|+++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a--l~~~~~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~~~ 141 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG--LVHLPMVYA-----NPGDIILVPDPGYTAYETGIQMAGATS 141 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH--HHHHHHHhC-----CCCCEEEECCCCccchHHHHHhcCCEE
Confidence 57766666677777666564 33 346666666532 223333332 256899999998888888899999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-ccccC
Q 002263 593 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 666 (946)
Q Consensus 593 v~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~~ 666 (946)
+.+|++++ ..+|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+-..
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 218 (399)
T PRK07681 142 YYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP 218 (399)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC
Confidence 99999765 3689999999886 68899999998 5789886 238899999999999999999864211 11100
Q ss_pred CC------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 667 PG------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 667 pg------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
+. ...-.|++.+++|+|+.| |.++|++.+++++...+-.. +.....+.+ ...
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~~i~~~~l~~~~~~~--------------~~~~~~~~s----~~~ 276 (399)
T PRK07681 219 ISFLSVPGAKEVGVEINSLSKSYSLA----GSRIGYMIGNEEIVRALTQF--------------KSNTDYGVF----LPI 276 (399)
T ss_pred CChhhCCCCcccEEEEeecccccCCc----cceeEEEecCHHHHHHHHHH--------------HhhcccCCC----HHH
Confidence 11 111236677889988643 67899999887665443210 000111111 111
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-C
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-Y 818 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~ 818 (946)
..++..++. .+.+-+++..+....+.+++.+.|++. +.+. .+.+..+ ++++++ .+.+..+++++|.+ +
T Consensus 277 q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~p~~g~f--~~~~l~-----~~~~~~~~~~~l~~~~ 346 (399)
T PRK07681 277 QKAACAALR-NGAAFCEKNRGIYQERRDTLVDGFRTFGWNVD--KPAGSMF--VWAEIP-----KGWTSLSFAYALMDRA 346 (399)
T ss_pred HHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeeeE--EEEECC-----CCCCHHHHHHHHHHhC
Confidence 111222222 222334444445556777888888875 3332 1222222 455654 24577889999987 8
Q ss_pred CcccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 819 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 819 Gi~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
|+.+.. ..|. ..+++||++. .++++++++++.|++
T Consensus 347 gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 347 NVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 997532 2232 2478999997 468899999998887
No 215
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.68 E-value=1.5e-14 Score=167.13 Aligned_cols=302 Identities=17% Similarity=0.179 Sum_probs=183.2
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhhh-hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCE
Q 002263 67 HVPPVILRNIMENPAWYTQYTPYQAEIA-QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKT 145 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~~~pyq~e~s-qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~ 145 (946)
.+|..+.+++.+ ++..|++.....+ ..+-+.+..+++.+|+|+|++. +.+++++++++.+++.++ . +||+
T Consensus 92 ~l~~~vieAv~~---~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l--~--~Gde 162 (454)
T TIGR00474 92 PLAEEAIEAVTD---AARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL--A--KGKE 162 (454)
T ss_pred CCCHHHHHHHHH---HHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh--C--CcCE
Confidence 367777667663 4444542211121 1123456788899999999987 567888887766555433 3 8999
Q ss_pred EEEcCCCCHHH----HHHHHHhhcCCCeEEEEecc------ccccc-cCCCEeEEEEEcC-CC--ce--eecchHHHHHH
Q 002263 146 FIIASNCHPQT----IDICITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKN 209 (946)
Q Consensus 146 vvv~~~~Hps~----~~~~~~~a~~~gi~v~~~~~------~~l~~-i~~~t~~v~v~~p-n~--~G--~i~di~~i~~~ 209 (946)
||+++.+|+++ .-+ ...+..|+++++++. +++++ ++++|++|++.++ |+ .| .+.|+++|+++
T Consensus 163 VIvs~~e~v~~ggs~~i~--~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~l 240 (454)
T TIGR00474 163 VIVSRGELVEIGGSFRIP--DVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVAL 240 (454)
T ss_pred EEECCChhhhhcchhhHH--HHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHH
Confidence 99999998543 222 123457999999865 45666 8899999988776 44 46 47899999999
Q ss_pred HHhCCcEEEEEecCcc-------ccC-----CCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceE
Q 002263 210 AHANGVKVVMATDLLA-------LTI-----LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIV 276 (946)
Q Consensus 210 a~~~gal~~v~a~~~a-------l~~-----l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~ 276 (946)
||++|++++||. ..+ +++ +..+.++|+|++++|+ |+| |||++|++++++++++++...-+
T Consensus 241 a~~~g~~vivD~-~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l 313 (454)
T TIGR00474 241 GREHGLPVMEDL-GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPL 313 (454)
T ss_pred HHHcCCeEEEEC-CCcccccchhccCCCCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchh
Confidence 999999999953 110 111 1234579999999999 655 56778999999988877632110
Q ss_pred eEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH--HH----HHhChhhHHHHH---HHHHHHHHHHHH
Q 002263 277 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLKTIA---QRVHGLAGTFAL 347 (946)
Q Consensus 277 G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~--y~----~~~g~~Gl~~i~---~~~~~~a~~l~~ 347 (946)
+ +.+ |-.|- .+.++.+++ |+ ++..-.|++.+. +++.++|..+++
T Consensus 314 ~--------r~l-----------r~~k~--------~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~ 366 (454)
T TIGR00474 314 T--------RAL-----------RVDKL--------TLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAK 366 (454)
T ss_pred H--------HHH-----------hhChH--------HHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHH
Confidence 0 000 00110 111222222 11 122223433322 344566777777
Q ss_pred HHhcC--CCE--EEcC-C--------C--CcCeEEEec--CC--HHHHHHHHHHcCC--eeeeecCCeEEEEeccCCCHH
Q 002263 348 GLKKL--GTV--EVQG-L--------P--FFDTVKVKC--AD--AHAIASAAYKIEM--NLRVVDSNTVTASFDETTTLE 406 (946)
Q Consensus 348 ~L~~~--g~~--~~~~-~--------~--~~~~~~i~~--~~--~~~v~~~L~~~GI--~~~~~~~~~lris~~~~~t~e 406 (946)
.|+++ .++ ++.. . | ..+++.+.+ .+ +.++.++|++... ..+ +.++.+.+-+-.- .++
T Consensus 367 ~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r-~~~~~~~ld~r~~-~~~ 444 (454)
T TIGR00474 367 RLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGR-IEDDRFLLDLRTL-LED 444 (454)
T ss_pred HHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCcC-CHH
Confidence 77663 113 3331 1 1 234544433 33 7899999997654 333 4556655554332 567
Q ss_pred HHHHHHHHH
Q 002263 407 DVDKLFIVF 415 (946)
Q Consensus 407 did~ll~~l 415 (946)
|++.+++.|
T Consensus 445 ~~~~~~~~~ 453 (454)
T TIGR00474 445 EEELLIEAL 453 (454)
T ss_pred HHHHHHHHh
Confidence 888888766
No 216
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.68 E-value=7e-15 Score=167.10 Aligned_cols=274 Identities=18% Similarity=0.179 Sum_probs=179.8
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
.|..+...++++.+++++|.+. ..++.+|+.++.+++.++ .. +||+|++++..|+++...++. .|++++.+
T Consensus 57 ~g~~~~~~~l~~~la~~~~~~~--~i~~~~G~~~~~~~l~~~-~~--~gd~v~~~~~~~~~~~~~~~~----~g~~~~~~ 127 (360)
T TIGR00858 57 SGNSPLHEELEEELAEWKGTEA--ALLFSSGYLANVGVISAL-VG--KGDLILSDALNHASLIDGCRL----SGARVRRY 127 (360)
T ss_pred cCCcHHHHHHHHHHHHHhCCCC--EEEECchHHHHHHHHHHh-CC--CCCEEEEEccccHHHHHHHHh----cCCceEEe
Confidence 4444556778899999999643 445555665555544443 23 889999999999998877643 46666665
Q ss_pred c---cccccc-cC----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC----------CCCc
Q 002263 175 D---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGEL 235 (946)
Q Consensus 175 ~---~~~l~~-i~----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~----------~~~~ 235 (946)
+ ++++++ ++ +++++|++.++ |.+|.+.|+++|.++|+++|+++++| +..+.+.... ....
T Consensus 128 ~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVD-DAHGTGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred cCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEE-CcccccCcCCCCCchHHhcCCCcc
Confidence 4 455655 43 35677777776 67999999999999999999999994 2333332211 0123
Q ss_pred cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 236 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 236 GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
+.||+++|. |.|+. +| |++..++++.+.+... .+.+. . .++ +++...
T Consensus 207 ~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~----------~~~~~-----------~--~~~--~~~~~~ 254 (360)
T TIGR00858 207 PVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINR----------ARTLI-----------F--STA--LPPAVA 254 (360)
T ss_pred CCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHh----------Cccce-----------e--cCC--CCHHHH
Confidence 779999887 77753 23 6888887776554100 00000 0 000 111223
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee-
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 390 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~- 390 (946)
.+..+++ .++. .++++.++..++.+++.+.|+++| +++... ....+.+..+. +.++.++|.++||.+...
T Consensus 255 ~a~~~al--~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 255 AAALAAL--ELIQ--EEPWRREKLLALIARLRAGLEALG-FTLMPS-CTPIVPVIIGDNASALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HHHHHHH--HHHh--hCHHHHHHHHHHHHHHHHHHHHcC-CccCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 3333443 2221 235677888999999999999987 776532 22234455543 678999999999988532
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 ------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 ------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..+.+|++++.+++.+|+++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 12589999999999999999999874
No 217
>PRK07324 transaminase; Validated
Probab=99.68 E-value=1e-14 Score=166.77 Aligned_cols=291 Identities=15% Similarity=0.183 Sum_probs=175.8
Q ss_pred HHHHHHHHhhC-CCcccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 524 NLGEWLCTITG-FDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 524 el~~~la~l~G-~~~~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
++++.++++++ .+...+.. ++++++.. ++++.+. .++++|+++.+.|..+...++..|.+++.+|++++
T Consensus 66 ~lr~~ia~~~~~~~~~~vi~t~G~~~al~---~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 66 EFKEAVASLYQNVKPENILQTNGATGANF---LVLYALV-----EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred HHHHHHHHHhcCCChhhEEEcCChHHHHH---HHHHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeccccc
Confidence 56677777664 55444444 44444443 3333321 25688999988887777778899999999998753
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccc-cccc-ccCCCcc-CCC
Q 002263 601 -GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG-LTSPGYI-GAD 673 (946)
Q Consensus 601 -g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~-a~~g-l~~pg~~-GaD 673 (946)
..+|++++++++. +++++|++++|+ .+|.+-+ ++++|+++|+++|+++++|.++.. ...+ .....+. .-.
T Consensus 138 ~~~~d~~~l~~~~~---~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~ 214 (373)
T PRK07324 138 GWLPDLDELRRLVR---PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKG 214 (373)
T ss_pred CCCCCHHHHHHhCC---CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCE
Confidence 4589999999886 789999999994 7898761 389999999999999999987531 0111 1111111 123
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
|++.+++|+|+.| |.++|++.+++.+.+.+... +....++.+...+. ++...+. ..
T Consensus 215 I~~~s~SK~~~~~----G~RiG~i~~~~~li~~~~~~--------------~~~~~~~~~~~~q~----~a~~~l~--~~ 270 (373)
T PRK07324 215 ISTNSMSKTYSLP----GIRVGWIAANEEVIDILRKY--------------RDYTMICAGVFDDM----LASLALE--HR 270 (373)
T ss_pred EEEecchhhcCCc----cceeEEEecCHHHHHHHHHH--------------hCcEEecCChHHHH----HHHHHHc--CH
Confidence 6667888988644 78899999877665443210 00112222111111 1222222 12
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCccc-CCCCCCCC
Q 002263 754 K-GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG-PTMSWPVP 830 (946)
Q Consensus 754 e-Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~-~~~~~p~~ 830 (946)
+ -+++..+....+.+.+.+.|++...+.+..+++..+ +.+.++ .+.+..+++++|. ++|+.+ +...|..+
T Consensus 271 ~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~--~~i~~~-----~~~~~~~~~~~ll~~~gv~v~pg~~F~~~ 343 (373)
T PRK07324 271 DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVST--SFVKLD-----VDMPSEDFCLKLLKETGVLLVPGNRFDLE 343 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEE--EEEEeC-----CCCCHHHHHHHHHHhcCEEEECccccCCC
Confidence 2 233334444556677777777641221112222222 234443 1357788999975 679875 33345556
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 831 GTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 831 ~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+++||+++. +++.+++.++.|++.++
T Consensus 344 ~~iRis~~~--~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 344 GHVRIGYCC--DTETLKKGLKKLSEFLR 369 (373)
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 899999864 46667766666666554
No 218
>PRK04311 selenocysteine synthase; Provisional
Probab=99.68 E-value=9.1e-15 Score=169.40 Aligned_cols=306 Identities=18% Similarity=0.174 Sum_probs=184.2
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhhhh-hHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCE
Q 002263 67 HVPPVILRNIMENPAWYTQYTPYQAEIAQ-GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKT 145 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~~~pyq~e~sq-g~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~ 145 (946)
.+|..+.+++.+ ++..|......+.. .+-+....+++.+|+|+|++. +.+++++++++..++.++ . +||+
T Consensus 97 ~l~~~v~eav~~---~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~--a~vv~sgtaAl~l~l~~l--~--~Gde 167 (464)
T PRK04311 97 LLSEAAIEAVTE---AARGYSNLEYDLATGKRGSRDRALAALLCALTGAED--ALVVNNNAAAVLLALNAL--A--AGKE 167 (464)
T ss_pred CCCHHHHHHHHH---HHhcccccccchhhcccchHHHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHh--C--CCCE
Confidence 377777667653 33444321111221 123456688899999999875 778888987776555443 2 7899
Q ss_pred EEEcCCCCHHHHH--HHHHhhcCCCeEEEEecc------ccccc-cCCCEeEEEEEcC-CC--ce--eecchHHHHHHHH
Q 002263 146 FIIASNCHPQTID--ICITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAH 211 (946)
Q Consensus 146 vvv~~~~Hps~~~--~~~~~a~~~gi~v~~~~~------~~l~~-i~~~t~~v~v~~p-n~--~G--~i~di~~i~~~a~ 211 (946)
||+++.+|.++-. .+....+..|+++++++. +++++ ++++|++|++.++ |+ +| ...|+++|+++||
T Consensus 168 VIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak 247 (464)
T PRK04311 168 VIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGK 247 (464)
T ss_pred EEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHH
Confidence 9999988864311 011123457999988875 35666 8889999998876 54 45 5679999999999
Q ss_pred hCCcEEEEEecCc------cccC-----CCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEe
Q 002263 212 ANGVKVVMATDLL------ALTI-----LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 279 (946)
Q Consensus 212 ~~gal~~v~a~~~------al~~-----l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s 279 (946)
++|++++||+-.- .++. +..+.++|+|++++|+ |+| |||++|++++++++++++...-++
T Consensus 248 ~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~-- 319 (464)
T PRK04311 248 EHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLK-- 319 (464)
T ss_pred HcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhH--
Confidence 9999999954110 1111 1123458999999999 654 567889999999988776321111
Q ss_pred ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH--HH----HHhChhhHH---HHHHHHHHHHHHHHHHHh
Q 002263 280 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLK---TIAQRVHGLAGTFALGLK 350 (946)
Q Consensus 280 ~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~--y~----~~~g~~Gl~---~i~~~~~~~a~~l~~~L~ 350 (946)
+.+ |-.| ..+.++.+.+ |+ .+.+-.+++ ...++..++|..+++.|+
T Consensus 320 ------r~l-----------r~dk--------~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~ 374 (464)
T PRK04311 320 ------RAL-----------RVDK--------LTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALK 374 (464)
T ss_pred ------HHH-----------hcch--------HHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 001 1111 1222333332 21 122222322 122445567777777777
Q ss_pred cCC--CE--EEcCC---------C--CcCeEEEec--CC--HHHHHHHHHHcC--CeeeeecCCeEEEEeccCCCHHHHH
Q 002263 351 KLG--TV--EVQGL---------P--FFDTVKVKC--AD--AHAIASAAYKIE--MNLRVVDSNTVTASFDETTTLEDVD 409 (946)
Q Consensus 351 ~~g--~~--~~~~~---------~--~~~~~~i~~--~~--~~~v~~~L~~~G--I~~~~~~~~~lris~~~~~t~edid 409 (946)
+.. ++ ++... | ..+++.+.+ .+ +.++.++|++.. |..+ +.++.+.+-+-.- .++|++
T Consensus 375 ~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r-~~~~~~~ld~r~~-~~~~~~ 452 (464)
T PRK04311 375 AALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGR-IEDGRLLLDLRTL-EEEDEE 452 (464)
T ss_pred hccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCcC-CHHHHH
Confidence 642 13 33311 1 234544443 33 789999999754 4444 4556665554433 667888
Q ss_pred HHHHHHh
Q 002263 410 KLFIVFA 416 (946)
Q Consensus 410 ~ll~~l~ 416 (946)
.+++.|.
T Consensus 453 ~~~~~~~ 459 (464)
T PRK04311 453 RLAAALL 459 (464)
T ss_pred HHHHHHH
Confidence 8888775
No 219
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.68 E-value=9.9e-15 Score=165.27 Aligned_cols=298 Identities=16% Similarity=0.146 Sum_probs=198.1
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 139 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~ 139 (946)
+.|.++...|+.+.+.+.+.....+.|.+- ++ .++++.+|+++|+++.++.+++|+|.++..++.++. .
T Consensus 25 ~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----~~-----~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~-~ 93 (346)
T TIGR01141 25 NSNENPFGPPPKAKEALRAEADKLHRYPDP-----DP-----AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL-E 93 (346)
T ss_pred cCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----CH-----HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc-C
Confidence 555667778887776766533223333211 12 368899999999988899999999988776665542 2
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHH
Q 002263 140 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 209 (946)
Q Consensus 140 ~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~ 209 (946)
+||+|++++..|+.....+ +..|++++.+++ +++++ +++++++|++++| |.+|.+.|++++.++
T Consensus 94 --~gd~v~~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 94 --PGDAVLVPPPTYSMYEISA----KIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred --CCCEEEEcCCCHHHHHHHH----HHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 7899999998887655443 346888888765 23444 5678999999988 689999999999999
Q ss_pred HHhC--CcEEEEEecCccccCCCCC----CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecC
Q 002263 210 AHAN--GVKVVMATDLLALTILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 282 (946)
Q Consensus 210 a~~~--gal~~v~a~~~al~~l~~~----~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~ 282 (946)
++.+ |++++++.-...+.....+ ....-+++++|. |+|+.| |+.+|++++++++.+++....
T Consensus 168 ~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~----G~r~G~~~~~~~~~~~~~~~~------- 236 (346)
T TIGR01141 168 LERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLA----GLRIGYAIANAEIIDALNKVR------- 236 (346)
T ss_pred HHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhch----hhhceeeecCHHHHHHHHhcc-------
Confidence 9887 9999884311112111011 122334667775 887533 456899999888776652100
Q ss_pred CCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCC
Q 002263 283 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLP 361 (946)
Q Consensus 283 ~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~ 361 (946)
.+.+.+ .....+..+ ++. ....++++.++..++.+++++.|+++ | +++....
T Consensus 237 ---------------------~~~~~~-~~~~~~~~~--~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~ 289 (346)
T TIGR01141 237 ---------------------APFNLS-RLAQAAAIA--ALR--DDDFIEKTVEEINAERERLYDGLKKLPG-LEVYPSD 289 (346)
T ss_pred ---------------------CCCCCC-HHHHHHHHH--HhC--CHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEECCCc
Confidence 001111 111111111 111 11247788888899999999999988 6 8865422
Q ss_pred CcCeEEEecCC-HHHHHHHHHHcCCeeeeec-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 362 FFDTVKVKCAD-AHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 362 ~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~~-----~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..-+.+.++. +.++.++|.++||.+.... ++.+|+|++ +++|+++++++|+
T Consensus 290 -g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 -ANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred -CCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 2234555553 7889999999999886532 578999976 8999999999874
No 220
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.68 E-value=4.6e-16 Score=171.98 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.+.++++.+++++|.+.+.+.++++++|..++++++. +++++|+++...|.++...+.+.|.+++.++.+.+
T Consensus 60 ~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 4779999999999998765656777767755554432 25689999999999888888999999999977533
Q ss_pred ------CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccc--cccc--CCCcc
Q 002263 601 ------GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ--VGLT--SPGYI 670 (946)
Q Consensus 601 ------g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~--~gl~--~pg~~ 670 (946)
+.+|+++++++++++ +++++|++++||++|.+. |+++|+++||++|++++||+|+...+ .+.. ....+
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p~~~G~~~-dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEH-PDAKAAVITNPTYYGICY-NLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhC-CCceEEEEECCCCCCEec-CHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 479999999999743 578999999999999998 79999999999999999999875221 1111 12246
Q ss_pred CCCEEEeCCCcccccCCCCCCC-cceeEEEecc
Q 002263 671 GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH 702 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~ 702 (946)
|+|+++.|+||+++ || +.|++.+++.
T Consensus 210 ~~div~~S~hK~l~------g~~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTLP------ALTQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhcccc------hHhHHHHHHhCCC
Confidence 89999999999973 44 3456666654
No 221
>PRK09082 methionine aminotransferase; Validated
Probab=99.68 E-value=4.3e-15 Score=170.86 Aligned_cols=344 Identities=13% Similarity=0.151 Sum_probs=208.7
Q ss_pred HHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccc-cccCCCCcccccccHHHHHHHHHHHHHHhhCCCc--
Q 002263 461 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 537 (946)
Q Consensus 461 ~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f-~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~-- 537 (946)
+++.+..+.+++ .++.|+.+.+.++............. ...+.|.+ .+|..++...+++++.+++|.+.
T Consensus 19 ~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~~a~~l~~~~~~~~~~ 90 (386)
T PRK09082 19 IFTVMSALAAEH-----GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPP---MTGVAALREAIAAKTARLYGRQYDA 90 (386)
T ss_pred HHHHHHHHHhhC-----CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 556666655432 45677776655443222111100001 01223433 46888888889999999888752
Q ss_pred -ccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-CCCCCHHHHHHHHHh
Q 002263 538 -FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 614 (946)
Q Consensus 538 -~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~g~~D~e~L~~~i~~ 614 (946)
..+..++| +++.. ++++.+. .++++|+++...|+.+...++..|.+++.++.++ ++.+|+++++++++
T Consensus 91 ~~~i~~t~G~~~al~---~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~- 161 (386)
T PRK09082 91 DSEITVTAGATEALF---AAILALV-----RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161 (386)
T ss_pred CCcEEEeCCHHHHHH---HHHHHHc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-
Confidence 13444444 44433 3333332 2568899999988888888899999999999964 47899999999996
Q ss_pred cCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc--ccCCC----ccCCCEEEeCCCcccc
Q 002263 615 NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPG----YIGADVCHLNLHKTFC 684 (946)
Q Consensus 615 ~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g--l~~pg----~~GaDi~~~s~hK~f~ 684 (946)
+++++|++++| |.+|.+- .++++|.++|+++|+++++|.++.... .+ ..... ...-.+++.+++|+|+
T Consensus 162 --~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 239 (386)
T PRK09082 162 --PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYH 239 (386)
T ss_pred --ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhcc
Confidence 68889999998 5789762 269999999999999999999863111 11 11111 1123466778889885
Q ss_pred cCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH
Q 002263 685 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 764 (946)
Q Consensus 685 ~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~ 764 (946)
.| |.++|++.+++++...+... ......+.+ .....++..++.. .++-+++..+...
T Consensus 240 ~~----G~RiG~iv~~~~l~~~~~~~--------------~~~~~~~~~----~~~q~~~~~~l~~-~~~~~~~~~~~~~ 296 (386)
T PRK09082 240 VT----GWKVGYCVAPAALSAEFRKV--------------HQYNTFTVN----TPAQLALADYLRA-EPEHYLELPAFYQ 296 (386)
T ss_pred ch----hhhhhhhhCCHHHHHHHHHH--------------HhhhcCCCC----hHHHHHHHHHHhC-ChHHHHHHHHHHH
Confidence 43 67899999887665433110 000111111 1111112233322 3444555555566
Q ss_pred HHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH-HHCCcccC-CCCC---C-CCCEEEEEc
Q 002263 765 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHGP-TMSW---P-VPGTLMIEP 837 (946)
Q Consensus 765 ~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L-~~~Gi~~~-~~~~---p-~~~~lri~~ 837 (946)
++.+++.+.|++. +.+. .+.+.++ ++++++.+ .+.+..+++++| .++|+.+. ...| + ..+++|+++
T Consensus 297 ~~~~~~~~~L~~~~~~~~--~~~g~~~--~~~~~~~~---~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~ 369 (386)
T PRK09082 297 AKRDRFRAALANSRFKLL--PCEGTYF--QLVDYSAI---SDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF 369 (386)
T ss_pred HHHHHHHHHHHhCCCccc--CCCeeEE--EEEecccc---CCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe
Confidence 7788888888874 3331 1122222 34565421 145788999987 47799753 2223 2 246899999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 002263 838 TESESKEELDRYCDALIS 855 (946)
Q Consensus 838 t~~~t~~eid~~~~aL~~ 855 (946)
.. +++++++.++.|++
T Consensus 370 ~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 370 AK--QEETLDAAAERLCQ 385 (386)
T ss_pred cC--CHHHHHHHHHHHhh
Confidence 74 57778877777653
No 222
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.68 E-value=2.6e-14 Score=165.15 Aligned_cols=291 Identities=18% Similarity=0.272 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhc-CC-CCCCEEEEc-CCCCCCCHHHHHHcCC-------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKAR-GD-HHRNVCIIP-VSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~-G~-~~~~~Ili~-~saHg~~~~~a~~~G~------- 590 (946)
...++++.+++++|.+.+ ++.++|++++++++.++|.|+..+ |. +++++|+.. .+.||+...+..+.|-
T Consensus 80 ~~~~l~~~l~~~~~~~~~-~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (401)
T TIGR01885 80 VFGEFAEYVTKLFGYDKV-LPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNF 158 (401)
T ss_pred HHHHHHHHHHhhcCCCEE-EEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccccc
Confidence 356788999999987644 667899999999988888875322 32 235566644 4568876666554331
Q ss_pred -----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEeccccccc
Q 002263 591 -----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 591 -----~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~ 661 (946)
.++.++. .|+++|+++++++++++++|++..+ +..|.+.+ .+++|.++|++||+++++|+++. ++
T Consensus 159 ~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~ 232 (401)
T TIGR01885 159 GPYVPGFKKIPY-----NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GL 232 (401)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CC
Confidence 2344443 3799999999766678888888765 46788763 29999999999999999999863 23
Q ss_pred ccccCCC--------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 662 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 662 ~gl~~pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
.+.| .+..|+++++ |.|+ +||..+|+++.++++.+.+.... .. ...+
T Consensus 233 ---g~~G~~~~~~~~~~~~di~~~g--K~l~----~g~~~ig~v~~~~~i~~~~~~~~-------------~~-~t~~-- 287 (401)
T TIGR01885 233 ---GRTGKLLCVDHENVKPDIVLLG--KALS----GGVYPVSAVLADDDVMLTIKPGE-------------HG-STYG-- 287 (401)
T ss_pred ---CccchhhHHhhcCCCCCEEEee--cccc----CCCCCcEEEEEcHHHHhhccCCC-------------CC-CCCC--
Confidence 2222 2357888764 8774 45567888888877766543110 00 1111
Q ss_pred ccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeeEEEecccccccCCCCHHH
Q 002263 734 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 810 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~ 810 (946)
++...++++.+.|..+..+++.+ +...+++++.++|+++ ..+. ..+ .+. +..+.++.+. .+.+..+
T Consensus 288 --~~p~~~~aa~a~L~~i~~~~l~~---~~~~~~~~~~~~L~~l~~~~~~~~~g-~g~-~~~i~~~~~~----~~~~~~~ 356 (401)
T TIGR01885 288 --GNPLACAVAVAALEVLEEEKLAE---NAEKLGEIFRDQLKKLPKPIITEVRG-RGL-LNAIVIDESK----TGRTAWD 356 (401)
T ss_pred --CCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHhccCCceeEEee-cCe-eEEEEeccCc----chhHHHH
Confidence 23344555666777776555554 3445688999999875 3331 122 232 2222233210 1235678
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 811 i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+.++|.++|+.+.... .+.+||+|+..+|++|||+++++|.+++
T Consensus 357 l~~~l~~~Gv~v~~~~---~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 357 LCLKLKEKGLLAKPTH---GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred HHHHHHhCCEEEEecC---CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 9999999999874322 4789999999999999999999998764
No 223
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.67 E-value=3.1e-14 Score=165.31 Aligned_cols=331 Identities=18% Similarity=0.205 Sum_probs=201.4
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhh----CCC-cccccCCchHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT----GFD-SFSLQPNAGAAGEYAGLM 554 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~----G~~-~~~l~~~sGa~ge~a~l~ 554 (946)
..||++.+++..++..+... ..+.....+. .+...++.+.+++++ +++ .+.+..++|+.++++++.
T Consensus 51 ~~lGh~~p~v~~ai~~ql~~-~~~~~~~~~~--------~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alk 121 (425)
T PRK09264 51 LNYGHNNPVLKQALIDYLQR-DGITHGLDMH--------TTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALK 121 (425)
T ss_pred ccCCCCCHHHHHHHHHHHHh-cccccccccC--------cHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHH
Confidence 45788887777666665321 1121100111 123446777788765 233 233445899999998888
Q ss_pred HHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCCC---CCCHHHHHHHHHhcC--
Q 002263 555 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKG---NINIEELRKAAEANR-- 616 (946)
Q Consensus 555 a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~g---~~D~e~L~~~i~~~~-- 616 (946)
.+|.|. +|.+|| ...++||....+....|- .++.+|..... .-|+++|+++++++.
T Consensus 122 lAr~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (425)
T PRK09264 122 LARKVT------GRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG 195 (425)
T ss_pred HHHHhc------CCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCC
Confidence 888762 345666 567899988776544221 35556653211 137889999997542
Q ss_pred -CCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc--------cCCCEEEeCCCccc
Q 002263 617 -DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTF 683 (946)
Q Consensus 617 -~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f 683 (946)
+++++|++..- +..|++.+ .+++|.++|++||+++++|.++ +|+.+.|. ..+|++++ .|.+
T Consensus 196 ~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~----tG~GrtG~~~~~~~~~v~PDi~t~--~K~l 269 (425)
T PRK09264 196 VDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQ----AGCGRTGTFFSFERAGITPDIVTL--SKSI 269 (425)
T ss_pred CCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechh----hCCccccHHHHHhhcCCCCCEEEe--cccc
Confidence 46788877643 44566432 6999999999999999999875 34444442 24688877 4877
Q ss_pred ccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH-HHHcHhhHHHHHHH
Q 002263 684 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI-AMMGSKGLTEASKI 762 (946)
Q Consensus 684 ~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l-~~lG~eGl~~~~~~ 762 (946)
+ ++|-.+|.+.+++++..+.+.. . .+. +.|+...++++.+.+ ..+..+.+.+ +
T Consensus 270 ~----~~G~pigav~~~~~i~~~~~~~--------------~-~~T----~~gnp~~~aaa~a~l~~~~~~~~l~~---~ 323 (425)
T PRK09264 270 S----GYGLPMALVLIKPELDVWKPGE--------------H-NGT----FRGNNLAFVTATAALEEYWSDDAFEK---E 323 (425)
T ss_pred C----CCccceEEEEEchhhhccCCCc--------------c-CCC----CCCCHHHHHHHHHHHHHHHhhhHHHH---H
Confidence 4 3344578888887763221110 0 011 123344444455555 4444433433 3
Q ss_pred HHHHHHHHHHHHhcc---CC-ee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 002263 763 AILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 836 (946)
Q Consensus 763 ~~~~a~~l~~~L~~~---~~-v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~ 836 (946)
...+.++|.++|++. +. +. ..| .+.. +.+.+.. ......+.+.+.++|+.+..... ....||++
T Consensus 324 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg-~Gl~---~~i~l~~-----~~~~~~l~~~~~~~Gv~~~~~~~-~~~~lr~~ 393 (425)
T PRK09264 324 VKAKGELVRERLEEIAAKYPGLGAEVRG-RGMM---QGIDFGD-----GELAGKIAAEAFENGLIIETSGP-EDEVVKLL 393 (425)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceeccee-cccE---EEEEecC-----hHHHHHHHHHHHHCCCEEeccCC-CCCEEEEe
Confidence 445677787777653 32 11 111 1222 2333321 12356889999999998753321 13789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 002263 837 PTESESKEELDRYCDALISIREEIAQIENGK 867 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~ 867 (946)
|+..+|++|||++++.|.++++++.++|+.|
T Consensus 394 p~l~~t~~ei~~~~~~l~~~l~~~~~~~~~~ 424 (425)
T PRK09264 394 PPLTIDEEELEEGLDILEEAVAEVLAEEESK 424 (425)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhccccC
Confidence 9999999999999999999999887765543
No 224
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=2.3e-14 Score=167.37 Aligned_cols=337 Identities=14% Similarity=0.179 Sum_probs=213.5
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.+|++.+.+..++..+. ....+.....+. .+...++.+.|++++. ++. .++.++|+.++++++..+|.
T Consensus 60 ~lGh~~p~v~~Ai~~ql-~~l~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~sGsEAve~AlKlAr~ 129 (466)
T PRK07030 60 VFGHANPRINQRIKDQV-DQLEHVILAGFS--------HEPVIELSERLVKITPPGLSR-CFYADNGSSAIEVALKMSFH 129 (466)
T ss_pred cCCCCCHHHHHHHHHHH-HhcCCccccccC--------CHHHHHHHHHHHHhCCCCcCE-EEEeCCcHHHHHHHHHHHHH
Confidence 56888776666655552 211111100111 1334578888888874 333 46688999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC-----C-------CCCHHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAAE 613 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~-----g-------~~D~e~L~~~i~ 613 (946)
|...+|.++|.+|| ...++||....+..+.|- .+..+|.... + .-+++++++.++
T Consensus 130 ~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~ 209 (466)
T PRK07030 130 YWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLA 209 (466)
T ss_pred HHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 87667755566776 567899988776554332 1333443211 1 113677888887
Q ss_pred hcCCCeEEEEEeC--CCccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCC
Q 002263 614 ANRDNLSTLMVTY--PSTHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLH 680 (946)
Q Consensus 614 ~~~~~t~~vvvt~--Pn~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~h 680 (946)
++.+++++|+++. ....|++.+ .+++|.++|++||+++|+|.+ +.|+.+.|.+ | +|++++ .
T Consensus 210 ~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV----~TGfGRtG~~~a~~~~gv~PDiv~~--g 283 (466)
T PRK07030 210 EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEI----AVGFGRTGTMFACEQAGIRPDFLCL--S 283 (466)
T ss_pred hCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh----hhCcCccccchHHHhcCCCCCEEee--e
Confidence 6668899999886 244566642 599999999999999999986 5677777653 2 699987 4
Q ss_pred cccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHH
Q 002263 681 KTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 759 (946)
Q Consensus 681 K~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~ 759 (946)
|.++ || -.+|.+++++++.+.+.... . ........+ .+.|+.+.++++.+.|..+-++++.+.
T Consensus 284 Kgl~-----gG~~Pi~av~~~~ei~~~~~~~~--~--------~~~~~~h~~-T~~gnpla~aaa~a~L~~i~~~~l~~~ 347 (466)
T PRK07030 284 KALT-----GGYLPLAAVLTTDTVYQAFYDDY--P--------TLRAFLHSH-SYTGNPLACAAALATLDIFEQDNVIEN 347 (466)
T ss_pred hhcc-----CCcccceEEEecHHHHHHHhccc--c--------cccccccCC-CCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 8773 44 24777888877665431100 0 000000111 134577778888899999887765543
Q ss_pred HHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEeccc--ccc-cCCC---CHHHHHHHHHHCCcccCCCCCCC
Q 002263 760 SKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRG--LKN-TAGI---EPEDVAKRLMDYGFHGPTMSWPV 829 (946)
Q Consensus 760 ~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~--~~~-~~g~---~~~~i~~~L~~~Gi~~~~~~~p~ 829 (946)
...+.++|.++|++. +..+ ..|. |.. +.+.+.. ..+ .... ....+.+++.++|+.+...
T Consensus 348 ---~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~---~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---- 416 (466)
T PRK07030 348 ---NRALARRMAEATAHLADHPHVAEVRQT-GMI---LAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---- 416 (466)
T ss_pred ---HHHHHHHHHHHHHHHhcCCCEEEeEec-eeE---EEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----
Confidence 446678888888764 2221 2231 322 1222211 000 0000 1246888899999987432
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 830 PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 830 ~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+++++.|+..+|++|||.+++.+.++++++
T Consensus 417 g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999886
No 225
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.67 E-value=4.4e-15 Score=169.21 Aligned_cols=282 Identities=16% Similarity=0.195 Sum_probs=178.6
Q ss_pred HHHHHHHHHhhCCCcccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++.+++++|.+...+.. ++|+++. ...+++.+. .++++|+++...++.+...++..|++++.++.+.++
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~--i~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEV--IDTLMRTFI-----DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHH--HHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 57888899999987655444 5666532 222333321 245789998876655555678899999999987777
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCC--CccCCCEEEeC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGADVCHLN 678 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p--g~~GaDi~~~s 678 (946)
.+|+++++++++ +++++|++++| |.+|.+. +.++|.++|+++|+++++|+++..-...-..+ ....--+++.+
T Consensus 145 ~~~~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 145 SLDVDSVLNAIT---EKTKVIFLCTPNNPTGNLI-PEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred CcCHHHHHHHhc---cCCCEEEEeCCCCCCCCCc-CHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEe
Confidence 899999999986 67888899999 4799998 79999999999999999999874211100000 01111255567
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
++|+|+.| |.++|++.+++++...+... + ....++ ......+..++. ..+-+.+
T Consensus 221 ~SK~~g~~----GlRiG~~~~~~~~~~~~~~~------------~--~~~~~~------~~~~~~a~~~l~--~~~~~~~ 274 (361)
T PRK00950 221 FSKVFGLA----GLRIGYGFVPEWLIDYYMRA------------K--TPFSLT------RLSQAAAIAALS--DKEYIEK 274 (361)
T ss_pred ehHhhcCc----hhhcchhcCCHHHHHHHHHh------------c--CCCCCC------HHHHHHHHHHhc--CHHHHHH
Confidence 88988543 56789998877655432110 0 000111 111122223332 1222344
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCC--CCEEEE
Q 002263 759 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV--PGTLMI 835 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p~--~~~lri 835 (946)
..++...+.+++.+.|+ +.+ + .+.+. -+++++. +.+..+++++|.++|+.+.. ..|+. .+++|+
T Consensus 275 ~~~~~~~~r~~l~~~l~--~~~-~-~~~~~---~i~~~~~------~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRi 341 (361)
T PRK00950 275 SIEHGIKSREYLYNELP--FKV-Y-PSEAN---FVLVDVT------PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRV 341 (361)
T ss_pred HHHHHHHHHHHHHhhcC--eeE-C-CCcce---EEEEECC------CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEE
Confidence 44444455556666654 222 2 11222 2445553 35788999999999998643 33432 468999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i~ 857 (946)
++. +.+|+++++++|++++
T Consensus 342 s~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 342 SIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ECC---CHHHHHHHHHHHHHHh
Confidence 986 6789999999998875
No 226
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=1.2e-14 Score=167.96 Aligned_cols=328 Identities=14% Similarity=0.188 Sum_probs=203.7
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.+|+|.+.+..++..+. ....+..+.-+. .+...++.+.|+++++ ++. .++.++||.++++++..+|.
T Consensus 53 ~lGh~~p~i~~ai~~q~-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~SGseA~e~AlklAr~ 122 (422)
T PRK05630 53 AHGHGHPRLKAAAHKQI-DTMSHVMFGGLT--------HEPAIKLTRKLLNLTDNGLDH-VFYSDSGSVSVEVAIKMALQ 122 (422)
T ss_pred cCCCCCHHHHHHHHHHH-HhCCCcccCCcC--------CHHHHHHHHHHHhhCCCCcCE-EEEeCCcHHHHHHHHHHHHH
Confidence 56777766665555552 211111110010 1224477888988874 333 36778999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCCCCCC-------HHHHHHHHHhcCC
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKGNIN-------IEELRKAAEANRD 617 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~g~~D-------~e~L~~~i~~~~~ 617 (946)
|...+|..+|.+|+ ...++||....+..+.+- .+..+|.......+ .+.+++.+. +
T Consensus 123 ~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~ 199 (422)
T PRK05630 123 YSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---E 199 (422)
T ss_pred HHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---h
Confidence 87666655566776 568899987766544331 12334332111112 244555554 6
Q ss_pred CeEEEEEeCC--Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcccc
Q 002263 618 NLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFC 684 (946)
Q Consensus 618 ~t~~vvvt~P--n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~ 684 (946)
++++|+++.- ...|++.+ .+++|.++|++||+++|+|.++ .|+.+.|.+ | +|++++ .|.++
T Consensus 200 ~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~ 273 (422)
T PRK05630 200 TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA----TGFGRTGELFATLAAGVTPDIMCV--GKALT 273 (422)
T ss_pred ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce----eCCCcCchhhHHHhcCCCCCeeee--echhh
Confidence 8999988862 34566542 5899999999999999999874 556566542 3 688866 48773
Q ss_pred cCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH
Q 002263 685 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 764 (946)
Q Consensus 685 ~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~ 764 (946)
+|-+.+|.+++++++.+.+.... + ..... ..+.+.|+...++++.+.|..+.++.+.+ +..
T Consensus 274 ----gG~~p~~av~~~~~i~~~~~~~~-~----------~~~~~-h~~T~~g~Pla~aaa~aaL~~l~~~~~~~---~~~ 334 (422)
T PRK05630 274 ----GGFMSFAATLCTDKVAQLISTPN-G----------GGALM-HGPTFMANPLACAVAHASLEIIETGMWRK---QVK 334 (422)
T ss_pred ----cCccccceeeccHHHHHHHhccC-C----------CCccc-cCCCCcCCHHHHHHHHHHHHHHHhCcHHH---HHH
Confidence 33366788888887766543110 0 00000 01113356777777888888887765543 445
Q ss_pred HHHHHHHHHHhcc--CCee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCC
Q 002263 765 LNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 840 (946)
Q Consensus 765 ~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~ 840 (946)
.+.++|++.|++. +..+ ..|. |.. +-+.+.. ..+...+.+.+.++|+++... .+++|+.|...
T Consensus 335 ~~g~~l~~~L~~l~~~~~v~~vRg~-Gl~---~~ie~~~-----~~~~~~~~~~~~~~Gl~~~~~----g~~l~~~PpL~ 401 (422)
T PRK05630 335 RIEAELIAGLSPLAHLPGVADVRVL-GAI---GVVEMEQ-----PVDMEEATQAAVDHGVWLRPF----GRLVYVMPPYI 401 (422)
T ss_pred HHHHHHHHHHHHhhcCCCeeeeecc-ccE---EEEEECC-----cccHHHHHHHHHHCCeEEEec----CCEEEEECCcc
Confidence 6677888877653 2111 1221 221 2233321 123568899999999987532 47899999999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 002263 841 ESKEELDRYCDALISIREE 859 (946)
Q Consensus 841 ~t~~eid~~~~aL~~i~~e 859 (946)
.|++|||+++++|++++++
T Consensus 402 it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 402 TTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 9999999999999988754
No 227
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.67 E-value=3.2e-15 Score=168.55 Aligned_cols=272 Identities=18% Similarity=0.113 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 176 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 176 (946)
..++++.+++++| ..++.++.+||.++..++.++ + ++||+|+++...|+++...+. .+...|++++.++.
T Consensus 34 ~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l-~--~~gd~v~~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 107 (338)
T cd06502 34 TAKLEARAAELFG--KEAALFVPSGTAANQLALAAH-T--QPGGSVICHETAHIYTDEAGA-PEFLSGVKLLPVPGENGK 107 (338)
T ss_pred HHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHh-c--CCCCeEEEecCcceeeecCCc-HHHHcCceEEeecCCCCc
Confidence 4566789999999 445778888887665554444 2 389999999999987654311 12235888877765
Q ss_pred ---ccccc-cCC-------CEeEEEEEcCCCceee---cchHHHHHHHHhCCcEEEEE-ecCc----cccCCCCCCCccc
Q 002263 177 ---KDIDY-KSG-------DVCGVLVQYPGTEGEV---LDYGDFIKNAHANGVKVVMA-TDLL----ALTILKPPGELGA 237 (946)
Q Consensus 177 ---~~l~~-i~~-------~t~~v~v~~pn~~G~i---~di~~i~~~a~~~gal~~v~-a~~~----al~~l~~~~~~Ga 237 (946)
+++++ +.+ ++++|++.+||..|.+ .|+++|+++||++|++++|| ++.. +.+........++
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~ 187 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGV 187 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcC
Confidence 34444 443 6889999999666754 57889999999999999994 2211 1111001113578
Q ss_pred eEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHH
Q 002263 238 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 316 (946)
Q Consensus 238 Di~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a 316 (946)
|+++.+. |+|+.| +.++++.++++++++.... . + ..++.+. .++.+
T Consensus 188 d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~----------~----------~----~~~~~~~---~~~~~ 234 (338)
T cd06502 188 DSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRR----------K----------Q----AGGGMRQ---SGFLA 234 (338)
T ss_pred CEEEEeccccCCCc------cceEEECCHHHHHHHHHHH----------H----------H----hCCChhh---HHHHH
Confidence 9998887 777644 3356777777776652100 0 0 0011111 12211
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC----HHHHHHHHH---HcCCeeee
Q 002263 317 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY---KIEMNLRV 389 (946)
Q Consensus 317 ~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~----~~~v~~~L~---~~GI~~~~ 389 (946)
.++. ..+...+..+..++..++++++.+.|+++| +.+.. +..+.+.+..+. ..++.+.|. ++|+.++.
T Consensus 235 -~a~~--~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 235 -AAGL--AALENDLWLRRLRHDHEMARRLAEALEELG-GLESE-VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred -HHHH--HHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCccc-ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEe
Confidence 1121 233344566677888899999999999987 64432 333445555442 234445443 67998876
Q ss_pred ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
...+.+|++++.++|++|+++++++|.
T Consensus 310 ~~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 310 WGEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred cCCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 655899999999999999999999985
No 228
>PRK07682 hypothetical protein; Validated
Probab=99.67 E-value=3.9e-15 Score=170.72 Aligned_cols=301 Identities=13% Similarity=0.153 Sum_probs=191.6
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc-cccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~-~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+.+++.+.+|.+ .. .+..++| +++.. ++++.+. .++++|++++..|+.+...+++.|.
T Consensus 56 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~ 127 (378)
T PRK07682 56 NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALD---VAMRAII-----NPGDEVLIVEPSFVSYAPLVTLAGG 127 (378)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH---HHHHHhC-----CCCCEEEEeCCCchhhHHHHHHcCC
Confidence 3677777777888887776764 22 3444444 44442 3333332 2568899999888877777889999
Q ss_pred EEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-
Q 002263 591 KIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG- 663 (946)
Q Consensus 591 ~vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g- 663 (946)
+++.++.+. ++.+|+++|++++. +++++|++++| |.+|.+- .++++|.++|+++|+++++|.++..-. .+
T Consensus 128 ~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~ 204 (378)
T PRK07682 128 VPVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA 204 (378)
T ss_pred EEEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC
Confidence 999998753 46899999999986 68899999999 5788874 259999999999999999999753111 11
Q ss_pred ccC----CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 664 LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 664 l~~----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
..+ ++...-.+++.+++|+|+.| |.++|++.+++++.+.+-... .....+++ ..
T Consensus 205 ~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlR~G~~~~~~~~i~~l~~~~--------------~~~~~~~~----~~ 262 (378)
T PRK07682 205 YTSFASIKGMRERTILISGFSKGFAMT----GWRLGFIAAPVYFSEAMLKIH--------------QYSMMCAP----TM 262 (378)
T ss_pred CCChhhcccccCCEEEEecCcccccCh----hhhhhhhhcCHHHHHHHHHHH--------------HhhccCCC----HH
Confidence 000 11112346677889998644 567999998877665432100 00111111 11
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-H
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 817 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~ 817 (946)
...++..+|. .|.+.+++..+...++++++.+.|++. +.+ ..+.+.++ ++++++. .+.+..++++.|. +
T Consensus 263 ~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~p~g~~~--~~~~~~~----~~~~~~~~~~~ll~~ 333 (378)
T PRK07682 263 AQFAALEALR-AGNDDVIRMRDSYRKRRNFFVTSFNEIGLTC--HVPGGAFY--AFPSISS----TGLSSEEFAEQLLLE 333 (378)
T ss_pred HHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCeeEE--EEEeccC----CCCCHHHHHHHHHHh
Confidence 1112222332 233335555566667888899999875 332 12223221 2344421 1357788998876 6
Q ss_pred CCcccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 818 ~Gi~~~-~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+|+.+. ...|. ..+++||+++. +++++++.++.|++++++
T Consensus 334 ~gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 334 EKVAVVPGSVFGESGEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred CCEEEcCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 899864 22232 25899999974 588999999999887654
No 229
>PRK06105 aminotransferase; Provisional
Probab=99.67 E-value=1.8e-14 Score=168.29 Aligned_cols=344 Identities=17% Similarity=0.213 Sum_probs=208.5
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
.+|++.+.+..++..+. .+..+.. .+. +...+...++.+.|+++++.+ .-.++.++|+.+++++++.+|.|
T Consensus 61 ~lGh~~p~i~~Ai~~q~-~~~~~~~--~~~-----~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~ 132 (460)
T PRK06105 61 ALGFSEQRLVEAAARQM-KKLPFYH--TFS-----HKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYY 132 (460)
T ss_pred cCCCCCHHHHHHHHHHH-HhCCCee--ccc-----ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 56777776666666553 2222211 110 011233457888999987543 12366789999999999988888
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC------C-------CCCHHHHHHHHH
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK------G-------NINIEELRKAAE 613 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~------g-------~~D~e~L~~~i~ 613 (946)
...+|.++|.+|| ...++||....+..+.|. .+..++.... + ..+++++++++.
T Consensus 133 ~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~ 212 (460)
T PRK06105 133 NNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALIL 212 (460)
T ss_pred HHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHH
Confidence 7666654566776 468899988665433331 1233333210 0 012577888885
Q ss_pred hc-CCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCC
Q 002263 614 AN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLH 680 (946)
Q Consensus 614 ~~-~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~h 680 (946)
.. .+++++|++..- +..|++.+ .++++.++|++||+++++|.+ +.|+.+.|.+ | +|++++ .
T Consensus 213 ~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv----~tG~GRtG~~f~~~~~~v~PDi~~~--g 286 (460)
T PRK06105 213 AEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEV----ICGFGRTGNMFGCETFGIKPDILVM--S 286 (460)
T ss_pred HcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEecc----ccCCCcCchhhhHHhcCCCCCeeee--e
Confidence 33 357888888753 45576652 399999999999999999986 4566565532 2 688877 4
Q ss_pred cccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHH
Q 002263 681 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 760 (946)
Q Consensus 681 K~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~ 760 (946)
|.++ +|.-.+|.+++++++...+.... . .........| +.|+++.++++.+.|..+-++++.+
T Consensus 287 K~lg----gG~~P~~av~~~~~i~~~~~~~~-~---------~~~~~~h~~T-~~gnpl~~aaa~a~L~~i~~~~l~~-- 349 (460)
T PRK06105 287 KQLS----SSYQPLSAVLMNEKVYDPIADES-G---------KIGTFGHGFT-ASGHPVAAAVALENLAIIEERDLVG-- 349 (460)
T ss_pred cccc----cCcccceEEEEcHHHHHHHhccc-c---------cCcccccCCC-CCCCHHHHHHHHHHHHHHHhccHHH--
Confidence 8773 34323666777777655442110 0 0000001111 3456777778888888887766544
Q ss_pred HHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEecccccccC----CCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 002263 761 KIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTA----GIEPEDVAKRLMDYGFHGPTMSWPVPGT 832 (946)
Q Consensus 761 ~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~~----g~~~~~i~~~L~~~Gi~~~~~~~p~~~~ 832 (946)
+...+.++|.++|++. +.++ +.|. |.. .-+-+......... ...+..+.+.+.++|+.+.. ..+.
T Consensus 350 -~v~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~-~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~----~g~~ 422 (460)
T PRK06105 350 -NAAERGARLQARLRALADHPLVGEVRGV-GLI-AAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRA----MGDT 422 (460)
T ss_pred -HHHHHHHHHHHHHHHhhcCCCeEEEEec-ceE-EEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEe----cCCE
Confidence 4446778888888764 3221 2221 322 11112111000000 00135688888899998753 2478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 833 LMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 833 lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
++++|....|++|||++++.|.++++++..
T Consensus 423 i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 423 LAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988753
No 230
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.67 E-value=2.6e-14 Score=164.67 Aligned_cols=296 Identities=16% Similarity=0.188 Sum_probs=188.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCC-CCCCEEE-EcCCCCCCCHHHHHHcCCEEEEE---c
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCI-IPVSAHGTNPATAAMCGMKIVSV---G 596 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~-~~~~~Il-i~~saHg~~~~~a~~~G~~vv~v---~ 596 (946)
..++.++|+++++.....++.++|+.++++++..+|.|...+|. .+|.+|| ...++||....+....|-....- |
T Consensus 84 ~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 163 (408)
T PRK04612 84 PLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEP 163 (408)
T ss_pred HHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCC
Confidence 34778888888754333477889999999999999988755553 2355666 56789998887765444221110 1
Q ss_pred CCCC----CCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCC
Q 002263 597 TDAK----GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 597 ~~~~----g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg 668 (946)
..++ -..|++++++.++ .+++++|+++..+ +.|++.+ .+++|.++|++||+++++|.++ .|+.+.|
T Consensus 164 ~~~~~~~~~~~d~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~----tg~gr~G 237 (408)
T PRK04612 164 LPGGFRYVDFNDVEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQ----CGMGRTG 237 (408)
T ss_pred CCCCceEcCCCCHHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCcCC
Confidence 1110 1137899999885 2456666655333 4456553 3999999999999999999875 3444444
Q ss_pred cc--------CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 669 YI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 669 ~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
.+ -+|++++ .|+++ ||..+|.+.+++++.+.+.... ..+..+ ++...
T Consensus 238 ~~~a~~~~~~~pdi~t~--~K~l~-----~G~piga~~~~~~~~~~~~~~~--------------~~~t~~----~~p~~ 292 (408)
T PRK04612 238 TLFAHWQEQVTPDIVTL--AKALG-----GGFPIGAMLAGPKVAETMQFGA--------------HGTTFG----GNPLA 292 (408)
T ss_pred chhhhhhcCCCCCEEEE--cchhc-----CCCceEEEEECHHHHhhhcCCC--------------cCCCCC----CCHHH
Confidence 21 2477665 58874 4566888888877655442110 001112 34555
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
++++.+.|..+-++.+. ++...+.++|.++|++. +.+. ..|. |. +.- +.+.+. ....+.++.+.|
T Consensus 293 ~aaa~a~L~~~~~~~l~---~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl-~~~--i~~~~~---~~~~a~~i~~~l 362 (408)
T PRK04612 293 AAVARVALRKLASPQIA---ANVARQSAALRAGLEALNAEFGVFAQVRGR-GL-MLG--AVLAPA---HAGQAGAILDLA 362 (408)
T ss_pred HHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ce-EEE--EEecCc---hhhHHHHHHHHH
Confidence 66677778777665544 34456677888888764 3322 2232 32 211 222110 011356889999
Q ss_pred HHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 816 MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 816 ~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.++|+.+.... .+.+|+.|+...|++|||++++++++++.++.
T Consensus 363 ~~~Gvlv~~~g---~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 363 AEHGLLLLQAG---PDVLRFVPALNLTDAELADGLARLRLALADYV 405 (408)
T ss_pred HHCCeEEeeCC---CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999874322 37899999999999999999999999987754
No 231
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.67 E-value=1.8e-15 Score=171.52 Aligned_cols=296 Identities=9% Similarity=0.017 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCCH-HHHHHcCCEEE
Q 002263 519 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNP-ATAAMCGMKIV 593 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~~~-~~a~~~G~~vv 593 (946)
.+++.++++.+++++|.+. +.+..++|+.+.+++++.+. + +++++++. ...+|... ..++..|.. +
T Consensus 47 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~----~----~g~~~l~i~~G~fg~r~~~~a~~~g~~-~ 117 (360)
T PRK05355 47 EAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL----G----GGKKADYVDTGSWSKKAIKEAKKYGEV-N 117 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC----C----CCCeEEEEECCHHHHHHHHHHHHhCCc-e
Confidence 4678899999999999732 34666777777776654332 2 23455533 22222221 136677865 6
Q ss_pred EEcCCC-CCCCCHHHHHH-HHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCc
Q 002263 594 SVGTDA-KGNINIEELRK-AAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 669 (946)
Q Consensus 594 ~v~~~~-~g~~D~e~L~~-~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~ 669 (946)
.+..++ .|..+..++++ +++ +++++|.+++- +.+|+..++|++| +|++++||+++. +++.. ...+
T Consensus 118 ~~~~~~~~g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss--~g~~~idv~~ 186 (360)
T PRK05355 118 VAASSEDDGFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSD--ILSRPIDVSK 186 (360)
T ss_pred EEecccccCCCCCCChhhccCC---CCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCcc--ccCccCCHHH
Confidence 666654 57666666666 665 56778888775 5789996457766 899999999864 33321 2233
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC---CCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~---~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
.|+++++.||+|+ | ||+|++++++++.+.+... .+...++. .......|+++ ..+.+..+
T Consensus 187 --~d~~~~ssqK~lg-P-----~Glg~l~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~Tp~~--------~~i~aL~~ 249 (360)
T PRK05355 187 --FGLIYAGAQKNIG-P-----AGLTIVIVREDLLGRALPS-IPSMLDYKTHADNDSMYNTPPT--------FAIYLAGL 249 (360)
T ss_pred --ccEEEEecccccc-C-----CceEEEEECHHHHhhcccC-CChHHHHHHHHhcCCccCCCcH--------HHHHHHHH
Confidence 4699999999884 4 6899999998877665432 11111110 00000122222 12223344
Q ss_pred HHHHHcHh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 747 YIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 747 ~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
.|.++-++ |+.++.++...+++++.++|++. +... ..++......+.|.++. +....++.+.+.++|+++.
T Consensus 250 aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~-~~~~~rs~~v~sf~~~~-----~~~~~~~~~~~~~~Gi~~~ 323 (360)
T PRK05355 250 VFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNP-VAPEDRSRMNVPFTLAD-----EELDKKFLAEAKAAGLVGL 323 (360)
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC-CChhhcCCcEEEEEcCC-----hHHHHHHHHHHHHCCCccc
Confidence 56666677 78899999999999999999985 2221 11111111123444431 2334567778888999974
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 824 TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 824 ~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.... ..+.+|+|+...+|++|||+|+++|+++++
T Consensus 324 ~~~~-~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 324 KGHR-SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CCCC-ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3321 248899999999999999999999999754
No 232
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.67 E-value=1.8e-14 Score=166.53 Aligned_cols=297 Identities=14% Similarity=0.208 Sum_probs=192.2
Q ss_pred HHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC---------
Q 002263 522 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~--------- 590 (946)
..++.+.|+++++-+ ...++.++||.++++++..+|.|+..+|. +|.+|| ...++||....+....|-
T Consensus 88 ~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~-~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 166 (428)
T PRK07986 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGE-PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYK 166 (428)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCC-CCcEEEEECCCcCCCcHhhhcccCCchhhhhccC
Confidence 457788888887532 23467889999999999999988755553 456666 567899977665443331
Q ss_pred ----EEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEeCC-C-cccccc---cCHHHHHHHHHHcCCEEEEec
Q 002263 591 ----KIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDG 655 (946)
Q Consensus 591 ----~vv~v~~~~~------g~~D~e~L~~~i~~~~~~t~~vvvt~P-n-~~G~~~---~~i~~I~~ia~~~g~ll~vD~ 655 (946)
.++.+|.... ...|+++++++++++.+++++|++... . ..|++. ..+++|.++|++||+++++|.
T Consensus 167 ~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DE 246 (428)
T PRK07986 167 GYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADE 246 (428)
T ss_pred CCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1233332111 124678899989766678888888752 3 345543 249999999999999999998
Q ss_pred ccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCCCC
Q 002263 656 ANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 656 a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
++ .|+.+.|.+ | +|++++ .|.++ || -.+|.+++++++.+.+.....+ .
T Consensus 247 v~----tG~GrtG~~fa~~~~gv~PDi~t~--gK~l~-----gG~~p~~av~~~~~i~~~~~~~~~~------------~ 303 (428)
T PRK07986 247 IA----TGFGRTGKLFACEHAGIAPDILCL--GKALT-----GGTMTLSATLTTREVAETISNGEAG------------C 303 (428)
T ss_pred cc----cCCccCCCeeeecccCCCCCEEEe--chhhh-----CCcccCcchhchHHHHHHhhcCCCC------------c
Confidence 75 445555532 3 688875 58773 44 3456667777766554321000 0
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEecccccc
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN 802 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~ 802 (946)
.. ..+.+.|+++.++++.+.|..+-++++.+ +...+.++|.++|+++ +... +.|. |. + ..+.+..
T Consensus 304 ~~-~~~T~~g~p~~~aaa~a~L~~i~~~~~~~---~~~~~g~~l~~~l~~l~~~~~i~~vRg~-Gl-~--~~ve~~~--- 372 (428)
T PRK07986 304 FM-HGPTFMGNPLACAVANASLSLLESGDWQQ---QVAAIEAQLREELAPLRDAPMVADVRVL-GA-I--GVVETTR--- 372 (428)
T ss_pred cc-cCCCCCcCHHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHHHhcCCCEEeEecc-ce-E--EEEEeCC---
Confidence 00 01113356777788888888887766544 4446678888888764 2211 1221 22 1 2222221
Q ss_pred cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 803 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 803 ~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
......+.+.|.++|+.+... .+++++.|+...|++|||+++++|.+++++
T Consensus 373 --~~~~~~~~~~l~~~Gl~~~~~----g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 373 --PVNMAALQRFFVEQGVWIRPF----GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred --cccHHHHHHHHHHCCcEEEec----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 124568999999999987532 478999999999999999999999988643
No 233
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=2.8e-14 Score=166.31 Aligned_cols=329 Identities=17% Similarity=0.180 Sum_probs=198.8
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..||++.+.+..++..+. ..-.+.....+ ..+...++.+.|+++++ .....++.++|++++++++..+|.
T Consensus 55 ~~lGh~~p~v~~a~~~q~-~~~~~~~~~~~--------~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~ 125 (433)
T PRK08117 55 ANVGHRHPKVVQAIKEQA-DKLMHGPSGVI--------YYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKH 125 (433)
T ss_pred ccCCCCCHHHHHHHHHHH-HhccCcccccc--------CCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 357877777666666553 21111110001 11335578899999983 222346678999999888888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCCCC------------CCHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKGN------------INIEELRKAA 612 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~g~------------~D~e~L~~~i 612 (946)
|. +|++|+ +..++||....+..+.+- .+..+|...... .|++++++.+
T Consensus 126 ~t------gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 199 (433)
T PRK08117 126 VT------KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLF 199 (433)
T ss_pred hc------CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHH
Confidence 62 344555 677899988776543321 133444422111 2677888888
Q ss_pred Hh--cCCCeEEEEEeCC-CcccccccC----HHHHHHHHHHcCCEEEEecccccccccccCCCc------cC--CCEEEe
Q 002263 613 EA--NRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHL 677 (946)
Q Consensus 613 ~~--~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~------~G--aDi~~~ 677 (946)
++ ..+++++|++..- +..|.+. + +++|.++|++||+++++|.++. |+.+.|. +| +|++++
T Consensus 200 ~~~~~~~~~aavi~Epi~~~~G~~~-~~~~~l~~l~~lc~~~g~llI~DEv~t----G~gr~G~~~~~~~~gv~pDi~t~ 274 (433)
T PRK08117 200 KHQVTPEEVAAVIIEPVLGEGGYIV-PPKSFLKKLREICDRHGILLIFDEVQT----GFGRTGEWFAAQTFGVVPDIMTI 274 (433)
T ss_pred HhccCCCcEEEEEECCeeCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEecchh----ccCccccchhHhhcCCCCCEeeh
Confidence 64 2357888877643 4567775 4 9999999999999999999753 4444442 23 577544
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
.|+++ +|-.+|.+++++++...+.... ..+. +.++.+.++++.+.|..+..+++.
T Consensus 275 --sK~lg-----~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~~np~~~aaa~a~L~~l~~~~l~ 329 (433)
T PRK08117 275 --AKGIA-----SGLPLSAVVASKELMEQWPLGS--------------HGTT----FGGNPVACAAALATLEVIKEEKLL 329 (433)
T ss_pred --hhhcc-----CCCcceeEEEcHHHHhhccCCC--------------CCCC----CCcCHHHHHHHHHHHHHHHhccHH
Confidence 58774 3455778888877665442110 0011 223455566677777777655554
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccc-cccCCCCHHHHHHHHHHCCcccCCCCCCCCC
Q 002263 758 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL-KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 831 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~-~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~ 831 (946)
+. ...+.++++++|++. +.+. ..+. + .+ +-+.+..- +.........+.+.|.++|+.+.... +..+
T Consensus 330 ~~---~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G-l~--~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~~~ 401 (433)
T PRK08117 330 DN---ANEMGAYALERLEVLKEKHPVIGDVRGI-G-LM--IGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG-NAGN 401 (433)
T ss_pred HH---HHHHHHHHHHHHHHHHhcCCceeeeecC-C-cE--EEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC-CCCC
Confidence 43 345677888888764 3321 1221 2 21 11222110 00001124578888999998764322 1247
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+|++|+..+|+++||++++.|.++++++.
T Consensus 402 ~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 402 VLRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999987653
No 234
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.67 E-value=3.3e-14 Score=165.70 Aligned_cols=318 Identities=19% Similarity=0.200 Sum_probs=197.6
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC--
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 599 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-- 599 (946)
+.++++.+++++|.+.+ +.+++|++++..+++++. +++| |+++.+.+.++.....+.|.+++.+++++
T Consensus 80 ~~~Lreaia~~~~~~~v-v~t~ggt~A~~~~~~all--------~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYPYT-IPTHQGRAAEQILFPVLI--------KKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCCcE-EECCCHHHHHHHHHHHhC--------CCCC-EEccCCcccchHHHHHHcCCEEEEEeccccc
Confidence 45778889999998765 555677777654433321 2567 88887756666666889999999999853
Q ss_pred --------CCCCCHHHHHHHHHhcC-CCeEEEEEeCCC-ccc-ccc--cCHHHHHHHHHHcCCEEEEeccccc--ccc--
Q 002263 600 --------KGNINIEELRKAAEANR-DNLSTLMVTYPS-THG-VYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV-- 662 (946)
Q Consensus 600 --------~g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn-~~G-~~~--~~i~~I~~ia~~~g~ll~vD~a~~~--a~~-- 662 (946)
.|.+|+++|+++|++++ ++|++|++++|+ .+| .+- .++++|+++|++||+++++|+|+.. +..
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~ 229 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIK 229 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhh
Confidence 25699999999998543 479999999994 555 332 2588999999999999999998742 111
Q ss_pred ----cc--cCCCc------cCCCEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 663 ----GL--TSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 663 ----gl--~~pg~------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
+. .+..+ -.+|+++++.||.+. ||..|+++++ +++...+....+.. .+...
T Consensus 230 ~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~------~~~GG~i~~~d~~l~~~~~~~~~~~----------~g~~t 293 (460)
T PRK13238 230 QREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM------VNIGGLLCFRDEDLFTECRTLCILY----------EGFPT 293 (460)
T ss_pred hccccccCCCHHHHhhhhcccCcEEEEecccCCC------CcceeEEEcChHHHHHHhhhccccc----------CCccc
Confidence 11 11111 147999999999764 3434788888 45655543211100 00001
Q ss_pred cccCccchhhHHHHHHH-HH-HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccc---c
Q 002263 730 IAAAPWGSALILPISYT-YI-AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---T 803 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a-~l-~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~---~ 803 (946)
.+ |.......|.+ .+ ..+..+-+ +....++++|.+.|++. +.+.. +.+. |-+.+|+..+.. .
T Consensus 294 ~~----g~~~~~~~Ala~~l~e~~~~~~~----~~~~~~~~~l~~~L~~~G~~~~~--p~Gg--~~v~~d~~~~~~~~~~ 361 (460)
T PRK13238 294 YG----GLAGRDMEALAVGLYEGMDEDYL----AYRIGQVEYLGEGLEEAGVPIQT--PAGG--HAVFVDAGKFLPHIPA 361 (460)
T ss_pred cc----CcHHHHHHHHHhhHHHhhChHHH----HHHHHHHHHHHHHHHHCCCCeEc--cCCc--eEEEEEchhcCCCCCC
Confidence 11 11111112222 22 22222222 22344678999999875 66542 2332 446678764311 1
Q ss_pred CCCCHHHHHHHHH-HCCccc-CC--CCCC-----------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 002263 804 AGIEPEDVAKRLM-DYGFHG-PT--MSWP-----------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGK 867 (946)
Q Consensus 804 ~g~~~~~i~~~L~-~~Gi~~-~~--~~~p-----------~~~~lri~~t~-~~t~~eid~~~~aL~~i~~e~~~~~~~~ 867 (946)
.+....+++.+|. +.|+-+ +. +.++ ..+.+|+++.- .-|.+++|..++.|+.+.+.-..|..=+
T Consensus 362 ~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 441 (460)
T PRK13238 362 EQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRESIKGLR 441 (460)
T ss_pred CCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHhhcCCeE
Confidence 1224577888877 678874 32 2111 13679999874 3488999999999999987776665445
Q ss_pred CCCCCchhcc
Q 002263 868 ADIHNNVLKG 877 (946)
Q Consensus 868 ~~~~~~~~~~ 877 (946)
+..+|..|++
T Consensus 442 ~~~~~~~~r~ 451 (460)
T PRK13238 442 FTYEPPVLRH 451 (460)
T ss_pred EeecCcccee
Confidence 5556666554
No 235
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.67 E-value=3.3e-14 Score=167.12 Aligned_cols=350 Identities=13% Similarity=0.080 Sum_probs=206.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCC-cc--eeecCCCCCCCCCcHHHH--HHHHhCCccccccCCChhhhhhhHHHHHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNK-VY--KSFIGMGYYNTHVPPVIL--RNIMENPAWYTQYTPYQAEIAQGRLESLL 102 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~-~~--~~~~G~g~~~~~~p~~i~--~~i~~~~~~~t~~~pyq~e~sqg~l~~l~ 102 (946)
.+| +.+.+..++++++.+.-..+. .+ ..|.|-..- .+|+... ..+.+ .+ .. ....-+.|....+.-.
T Consensus 61 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~--~~p~~~~~l~~l~~--~l-N~-n~~~~~~spa~t~lE~ 132 (522)
T TIGR03799 61 EIP--EQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTS--ALPYFMLPLSKLMV--AL-NQ-NLVKIETSKAFTPLER 132 (522)
T ss_pred CCC--CCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccC--CCchHHHHHHHHHH--Hh-cC-CcceeecCcchHHHHH
Confidence 566 567788888888655433322 11 234433322 2344421 11221 11 11 1122234555555666
Q ss_pred HHHHHHHHHhCCC-------------CcceEEcccHHHHHHHHHHHhcccc-C----------------------CCCEE
Q 002263 103 NFQTMIADLTGLP-------------MSNASLLDEGTAAAEAMAMCNNIQK-G----------------------KKKTF 146 (946)
Q Consensus 103 e~q~~la~L~g~~-------------~~~~sl~~~~Ta~~ea~~la~~~~~-~----------------------~gd~v 146 (946)
+.-.++++|++.. .+...+++|||.+.-..+++.|... + ++..|
T Consensus 133 ~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v 212 (522)
T TIGR03799 133 QVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAI 212 (522)
T ss_pred HHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEE
Confidence 6678889988521 1335678888855443333322110 0 23579
Q ss_pred EEcCCCCHHHHHHHHHhhcCCCe---EEEEecc--------ccccc-cC----CCEeEE--EEEcC-CCceeecchHHHH
Q 002263 147 IIASNCHPQTIDICITRADGFDI---KVVVSDL--------KDIDY-KS----GDVCGV--LVQYP-GTEGEVLDYGDFI 207 (946)
Q Consensus 147 vv~~~~Hps~~~~~~~~a~~~gi---~v~~~~~--------~~l~~-i~----~~t~~v--~v~~p-n~~G~i~di~~i~ 207 (946)
++++.+|.|+.+.++.+ |+ +++.++. ++|++ ++ .+++.+ +.+.. +.+|.++|+++|+
T Consensus 213 ~~S~~~H~S~~kaa~~l----glg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa 288 (522)
T TIGR03799 213 LVSERGHYSLGKAADVL----GIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMA 288 (522)
T ss_pred EECCCchHHHHHHHHHc----CCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHH
Confidence 99999999998876543 44 5665554 34554 42 344434 33444 4699999999999
Q ss_pred HHHHhCCcEEEEEecCccccCCCCC------CC-ccceEEEecc-ccccccCCCCCCceEEEEEch-hhhhcCCCc--eE
Q 002263 208 KNAHANGVKVVMATDLLALTILKPP------GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGR--IV 276 (946)
Q Consensus 208 ~~a~~~gal~~v~a~~~al~~l~~~------~~-~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~--~~ 276 (946)
++|+++|++++|++- ++.+.+..+ .. .+||.++.++ |++++|++ +|++++|+ ++.+.+... .+
T Consensus 289 ~i~~~~g~~lHVDaA-~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~~~~~~~~~Yl 362 (522)
T TIGR03799 289 DIAQELGCHFHVDAA-WGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALMSAIEHHAEYI 362 (522)
T ss_pred HHHHHcCCeEEEEch-hhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHHHHhccCcchh
Confidence 999999999999541 222222221 22 3899999999 55776754 67898886 444544321 10
Q ss_pred eEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 002263 277 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 277 G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
- .. +...+ .+.+.|-++++. + +.+.++ +.++|.+|++++.++..+++++|.+.|++..+++
T Consensus 363 ~--~~--~~~d~--------~~~~legsR~~~----a-l~lw~a--L~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~e 423 (522)
T TIGR03799 363 L--RK--GSKDL--------GSHTLEGSRPGM----A-MLVYAG--LHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFE 423 (522)
T ss_pred c--CC--CCCcc--------ccceeecCcchH----H-HHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 0 00 00000 011223222221 2 133333 3889999999999999999999999999884499
Q ss_pred EcCCCCcCeEEEecCC-------------------------HHHHHHHHHHcCCe-eeee--c----C----CeEEEEec
Q 002263 357 VQGLPFFDTVKVKCAD-------------------------AHAIASAAYKIEMN-LRVV--D----S----NTVTASFD 400 (946)
Q Consensus 357 ~~~~~~~~~~~i~~~~-------------------------~~~v~~~L~~~GI~-~~~~--~----~----~~lris~~ 400 (946)
++.++.++.|+|+... ...|.+++.+.|.. +... . . -.+|+++.
T Consensus 424 l~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~ 503 (522)
T TIGR03799 424 LVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLA 503 (522)
T ss_pred EecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEec
Confidence 9987777777776310 23566777777774 3321 1 1 24899984
Q ss_pred -cCCCHHHHHHHHHH
Q 002263 401 -ETTTLEDVDKLFIV 414 (946)
Q Consensus 401 -~~~t~edid~ll~~ 414 (946)
+.+|.+||+.+++.
T Consensus 504 np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 504 NPLTTHEILQDILDE 518 (522)
T ss_pred CCCCCHHHHHHHHHH
Confidence 57889999988764
No 236
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.67 E-value=2.6e-14 Score=165.30 Aligned_cols=304 Identities=14% Similarity=0.154 Sum_probs=191.4
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--c-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++++..|.+ . ..+..++|++. +..++++.+. .++++|+++...++.+...+...|.++
T Consensus 78 ~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~--al~~~~~~l~-----~~Gd~Vlv~~P~y~~~~~~~~~~g~~v 150 (405)
T PRK06207 78 RGDADIRELLAARLAAFTGAPVDAADELIITPGTQG--ALFLAVAATV-----ARGDKVAIVQPDYFANRKLVEFFEGEM 150 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH--HHHHHHHHhc-----CCCCEEEEeCCCchhHHHHHHHcCCEE
Confidence 577777778888898888864 3 34555555442 2223333332 256899999988877777889999999
Q ss_pred EEEcCCC-----CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccc-ccc
Q 002263 593 VSVGTDA-----KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVG 663 (946)
Q Consensus 593 v~v~~~~-----~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~g 663 (946)
+.++++. +..+|+++|+++++ +++++|++++| |.+|.+-+ ++++|+++|+++|+++++|.++..- ..+
T Consensus 151 ~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~ 227 (405)
T PRK06207 151 VPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDG 227 (405)
T ss_pred EEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC
Confidence 9998852 46799999999996 67888999999 57898862 4889999999999999999986421 111
Q ss_pred --ccCCCccCC--C--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 664 --LTSPGYIGA--D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 664 --l~~pg~~Ga--D--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
......+.. | +++.++.|+|++| |.++|++.+++++...+... .....++.+.+.+
T Consensus 228 ~~~~~~~~~~~~~~~vi~i~SfSK~~~lp----GlRiG~ii~~~~l~~~~~~~--------------~~~~~~~~~~~~q 289 (405)
T PRK06207 228 TSYTHLRALPIDPENVITIMGPSKTESLS----GYRLGVAFGSPAIIDRMEKL--------------QAIVSLRAAGYSQ 289 (405)
T ss_pred CCCCchhcCCCCcCcEEEEecchhhccCc----ccceEEEEcCHHHHHHHHHH--------------HhHhccCCCHHHH
Confidence 111111221 2 6677889998755 67899999887665443210 0011122111111
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 816 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~- 816 (946)
.++..++. -+..-+.+..+....+.+++.+.|++...+.+..+++..+ +.++++. .+.+..+++++|.
T Consensus 290 ----~a~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--l~~~l~~----~~~~~~~~~~~l~~ 358 (405)
T PRK06207 290 ----AVLRTWFS-EPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSY--LFPRLPR----LAVSLHDFVKILRL 358 (405)
T ss_pred ----HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEE--EEEeCcc----cCCCHHHHHHHHHH
Confidence 11222222 1212244445555566778888887642222222222222 4556542 1246788999997
Q ss_pred HCCcccC-CCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGP-TMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 817 ~~Gi~~~-~~~~--p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++|+.+. ...| +.++++||++.. +.+++++-++.|.+++++.
T Consensus 359 ~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 359 QAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred hcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 6899853 3223 235789999985 5778888887777776554
No 237
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.66 E-value=8.7e-15 Score=169.27 Aligned_cols=279 Identities=15% Similarity=0.140 Sum_probs=175.1
Q ss_pred HHHHHH-HHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEec
Q 002263 98 LESLLN-FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSD 175 (946)
Q Consensus 98 l~~l~e-~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~-~a~~~gi~v~~~~ 175 (946)
++.+.+ .++.+++++|.+.+++. ..+||.++.+++.++ .. +||+|+++...|+++...+.. .++..|.+++.++
T Consensus 63 ~~~l~~~~~~~~~~~~g~~~~~v~-~~sgt~a~~~~l~~l-~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 138 (402)
T cd00378 63 VDEIEDLAIERAKKLFGAEYANVQ-PHSGSQANLAVYFAL-LE--PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVP 138 (402)
T ss_pred HHHHHHHHHHHHHHHhCCCceeee-cCCcHHHHHHHHHHh-cC--CCCEEEEecCccCccccccccccccccceeEEEec
Confidence 344555 45678899999875443 346777777666665 23 899999999999876544221 1223565544432
Q ss_pred -----------cccccc-c-CCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEE-ecCccc---cCCCCCCCccce
Q 002263 176 -----------LKDIDY-K-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLAL---TILKPPGELGAD 238 (946)
Q Consensus 176 -----------~~~l~~-i-~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~-a~~~al---~~l~~~~~~GaD 238 (946)
++++++ + .+++++|++.+|+ +|...|+++|+++||++|+++++| ++..++ +....+.. ++|
T Consensus 139 ~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~-~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 139 YGVDPETGLIDYDALEKMALEFKPKLIVAGASA-YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CCcCcccCCcCHHHHHHHHHhCCCCEEEecCcc-cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCc
Confidence 234555 4 4578888877764 478889999999999999999994 332222 11122223 789
Q ss_pred EEEecc-ccccccCCCCCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHH
Q 002263 239 IVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 316 (946)
Q Consensus 239 i~v~s~-k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a 316 (946)
++++|+ |+|+ ||..|++.+++ ++.+++.... .+ + ..++++. +...+
T Consensus 217 v~~~s~sK~l~------G~~gg~i~~~~~~~~~~l~~~~---------~~-~-------------~~~~~~~---~~~~a 264 (402)
T cd00378 217 VVTTTTHKTLR------GPRGGLILTRKGELAKKINSAV---------FP-G-------------LQGGPHL---HVIAA 264 (402)
T ss_pred EEEeccccCCC------CCCceEEEeccHHHHHHHHHHh---------Cc-c-------------ccCCchH---HHHHH
Confidence 998988 7663 35556666665 6665541000 00 0 0011111 12222
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC--C--HHHHHHHHHHcCCeeeee-
Q 002263 317 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV- 390 (946)
Q Consensus 317 ~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~~~- 390 (946)
+..++ ......++++..+++.++++++++.|++.| ++++.. .....+.+.++ + ...+.+.|.++||.+...
T Consensus 265 ~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~ 341 (402)
T cd00378 265 KAVAL--KEALEPEFKAYAKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341 (402)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCc
Confidence 22222 222223567788889999999999999987 887632 22233445554 2 567777888889988531
Q ss_pred ---------cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 002263 391 ---------DSNTVTASFDETT----TLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ---------~~~~lris~~~~~----t~edid~ll~~l~~ 417 (946)
.+..+|++++..+ +.+|++.+++.|..
T Consensus 342 ~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 342 LPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred CCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 2357999999865 79999999999874
No 238
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.66 E-value=7.1e-15 Score=164.73 Aligned_cols=291 Identities=18% Similarity=0.240 Sum_probs=195.9
Q ss_pred ccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 514 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 514 ~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
...|..+...++++.|++++|.+.+ +..++|=.++.+.+-++. ++++.|+...-.|.+....++..+.+++
T Consensus 78 ~i~G~~~~h~~LE~~lA~f~g~e~a-l~f~SGy~AN~~~i~~l~--------~~~dli~~D~lnHASiidG~rls~a~~~ 148 (388)
T COG0156 78 LISGTSDLHVELEEELADFLGAEAA-LLFSSGFVANLGLLSALL--------KKGDLIFSDELNHASIIDGIRLSRAEVR 148 (388)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCcE-EEEcccchhHHHHHHHhc--------CCCcEEEEechhhhhHHHHHHhCCCcEE
Confidence 3457778888999999999999865 445677777766655543 2467777777888888888999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCC--eEEEEEeCC--CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC-
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDN--LSTLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG- 668 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~--t~~vvvt~P--n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg- 668 (946)
..+. .|+++|++++++.... -..++++.. +..|.+- |+++|++++++||++++||.||..+..| .-|
T Consensus 149 ~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA-pL~~l~~L~~ky~a~L~VDEAHa~Gv~G--~~Gr 220 (388)
T COG0156 149 RFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA-PLPELVELAEKYGALLYVDEAHAVGVLG--PNGR 220 (388)
T ss_pred EecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC-CHHHHHHHHHHhCcEEEEEccccccccC--CCCc
Confidence 9987 5999999999863211 123444433 5678887 7999999999999999999998644333 221
Q ss_pred ----ccC-----CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 669 ----YIG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 669 ----~~G-----aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
..| .||+++++.|+|+. ..|++.++..+.+++-.+. +..- .+++. .+.
T Consensus 221 G~~e~~g~~~~~vdi~~gTlsKAlGs-------~Gg~v~g~~~~~d~L~~~a-----------r~~i---fStal--pP~ 277 (388)
T COG0156 221 GLAEHFGLEPEEVDIIVGTLGKALGS-------SGGYIAGSAALIDYLRNRA-----------RPFI---FSTAL--PPA 277 (388)
T ss_pred cHHHHhCCCCccceEEEEEchhhhcc-------cCceeeCcHHHHHHHHHhC-----------Ccee---ccCCC--CHH
Confidence 122 37999999999962 2368888877766653210 0000 01110 123
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
.++++.+.+..+-.. .+..++...++.++++.++.. +.+. +...+.. .+++.. ...+..+++.|+++
T Consensus 278 ~aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~~~~~--~s~s~I~-pv~~gd-------~~~a~~~s~~l~~~ 345 (388)
T COG0156 278 VAAAALAALRILEEG--PERRERLQELAAFFRSLLKALGLVLL--PSESPII-PVILGD-------EERALEASRALLEE 345 (388)
T ss_pred HHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCccC--CCCCCee-eeEeCC-------HHHHHHHHHHHHHC
Confidence 344455566666533 233445556777888666553 4432 1112222 122321 12467899999999
Q ss_pred CcccCCCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 819 Gi~~~~~~~p-~~---~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
||.+..+.+| |+ ..||+++|..+|++||++++++|.++
T Consensus 346 Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 346 GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 9998877777 43 67999999999999999999999764
No 239
>PRK06917 hypothetical protein; Provisional
Probab=99.66 E-value=4.7e-14 Score=164.25 Aligned_cols=344 Identities=17% Similarity=0.181 Sum_probs=212.0
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..+|+|.+.+..++..+. ....+.....+. .+...++.+.|++++... ...++.++||.++++++..+|.
T Consensus 43 ~~lGh~hp~v~~Ai~~ql-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~ 113 (447)
T PRK06917 43 AGIGHGVKEIADAIKEQA-EEVSFVYRSQFT--------SEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQ 113 (447)
T ss_pred ccCCCCCHHHHHHHHHHH-hhCcCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 357888877777776663 222222110111 133457888999988543 2346788999999999998888
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE------------EEEEcCCCC-----C-------CCCHHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAK-----G-------NINIEELRKAAE 613 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~------------vv~v~~~~~-----g-------~~D~e~L~~~i~ 613 (946)
|...+|.++|++|+ ...++||....+..+.|.. +..++.... + .-|++.+++.++
T Consensus 114 ~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~ 193 (447)
T PRK06917 114 HFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIE 193 (447)
T ss_pred HHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87667766677777 4578999988776554421 122221110 0 013567888887
Q ss_pred hcC-CCeEEEEEeCC-C-ccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCC
Q 002263 614 ANR-DNLSTLMVTYP-S-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNL 679 (946)
Q Consensus 614 ~~~-~~t~~vvvt~P-n-~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~ 679 (946)
++. +++++|+++.- . .-|++.+ .+++|.++|++||+++++|.++ .|+.+.|.+ | +|++++
T Consensus 194 ~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~----tGfGRtG~~~a~~~~gv~PDi~~~-- 267 (447)
T PRK06917 194 RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVM----TGLGRTGAMFAMEHWGVEPDIMTL-- 267 (447)
T ss_pred hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechh----hCcCcccchhhHHhcCCCCCEEEe--
Confidence 654 47888888753 2 2345532 4899999999999999999864 466666643 2 698877
Q ss_pred CcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHH
Q 002263 680 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 759 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~ 759 (946)
.|.++ +|--.+|.+.+++++++.+.... ..... .+.+.|+.+.++++.+.|..+..+++.+
T Consensus 268 gK~l~----~G~~Pi~a~~~~~~i~~~~~~~~-------------~~~~~-~~T~~gnpl~~aaa~a~l~~l~~~~l~~- 328 (447)
T PRK06917 268 GKGLG----AGYTPIAATVVSDRVMEPILRGS-------------RSIMS-GHTLSANPLSAATALAVLEYMEKHNLPE- 328 (447)
T ss_pred eehhc----cCCcceEEEEEcHHHHHHHhccC-------------ccccc-ccCCCCCHHHHHHHHHHHHHHHHCCHHH-
Confidence 48773 33213677777777665432100 00000 1113456777888888898887766544
Q ss_pred HHHHHHHHHHHHHHHhcc---CCee--eccCCCcee-eeEEEecccccccC---CCCHHHHHHHHHHCCcccCCCCC---
Q 002263 760 SKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HEFIVDLRGLKNTA---GIEPEDVAKRLMDYGFHGPTMSW--- 827 (946)
Q Consensus 760 ~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~-~e~v~~~~~~~~~~---g~~~~~i~~~L~~~Gi~~~~~~~--- 827 (946)
+...+.++|.+.|+++ +.++ ..|. |..+ -+|+-+ +..+... ......+.+.|.++|+.+.....
T Consensus 329 --~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~ 404 (447)
T PRK06917 329 --KAAEKGEYLIKGLQKVQQQSTIIGDVRGK-GLLIGVEFVAD-KKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQD 404 (447)
T ss_pred --HHHHHHHHHHHHHHHHHhcCCCEEEEeec-ceEEEEEEecc-CCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccC
Confidence 3446677888888764 3322 2221 3221 122111 1000000 01145688888999998742210
Q ss_pred -CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 828 -PVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 828 -p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+..+.++++|+..+|++|||+++++|.++++++.
T Consensus 405 g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 405 GKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 0146899999999999999999999999998763
No 240
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.66 E-value=1.7e-14 Score=165.43 Aligned_cols=214 Identities=24% Similarity=0.252 Sum_probs=153.7
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc---
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~--- 178 (946)
.++++.+|+++|.+. +.++.+|++++.+++.++ .. +||+|+++...|+.+...+...+...|++++++|+++
T Consensus 62 ~~le~~lA~l~g~~~--av~~~sG~~Ai~~~l~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~ 136 (391)
T TIGR01328 62 SNLEGRIAFLEGTEA--AVATSSGMGAIAATLLTI-LK--AGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE 136 (391)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 457789999999876 678889998877666655 23 8999999999999888877776778899999998754
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +..+.+....+.++|+|+++.|. |.|++| |+
T Consensus 137 l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~~~~~g~Divv~S~sK~lgg~---g~ 212 (391)
T TIGR01328 137 VKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVD-NTFATPMLTNPVALGVDVVVHSATKYIGGH---GD 212 (391)
T ss_pred HHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCchhccCCchhcCCCEEEccccccccCC---CC
Confidence 444 6788999999998 67999999999999999999999994 34455555566778999999998 777542 33
Q ss_pred CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHH
Q 002263 256 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 335 (946)
Q Consensus 256 P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 335 (946)
+.+|++..++++++++.. .+ ++...+... ++. .++ +...+-+-+....
T Consensus 213 ~~gG~v~~~~~li~~l~~--~~----------------------~~~~~g~~l---~~~---~a~--l~l~~L~tl~~r~ 260 (391)
T TIGR01328 213 VVAGLICGKAELLQQIRM--VG----------------------IKDMTGSVI---SPF---DAW--LILRGLKTLNIRM 260 (391)
T ss_pred ceEEEEEcCHHHHHHHHH--HH----------------------HHhCCCCCC---CcH---HHH--HHHhCcCcHHHHH
Confidence 346888888877655410 00 000000000 111 111 1223334455666
Q ss_pred HHHHHHHHHHHHHHhcCCCEE
Q 002263 336 QRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 336 ~~~~~~a~~l~~~L~~~g~~~ 356 (946)
++..+++.++++.|++.++++
T Consensus 261 ~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 261 KRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 777889999999999875354
No 241
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=6.3e-15 Score=170.39 Aligned_cols=143 Identities=20% Similarity=0.145 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+|++.|.+. +.++++||+|+.+++.++ +. +||+||++..+|+++...+...++.+|++++++|++
T Consensus 65 ~~~~le~~lA~l~g~~~--av~~sSGt~Al~~al~~l-l~--~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~ 139 (433)
T PRK08134 65 TVAVLEERVAALEGGVG--AIATASGQAALHLAIATL-MG--AGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDI 139 (433)
T ss_pred HHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCH
Confidence 35678899999999876 678999999988777665 33 799999999999998887765556789999999875
Q ss_pred -cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-cccc
Q 002263 178 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 248 (946)
Q Consensus 178 -~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg 248 (946)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++||+ .++.+....|.++|||+++.|+ |+++
T Consensus 140 ~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~-t~a~~~~~~pl~~GaD~vv~S~tK~l~ 213 (433)
T PRK08134 140 DGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDS-TFTTPYLLRPFEHGADLVYHSATKFLG 213 (433)
T ss_pred HHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEEC-CCcccccCCchhcCCCEEEeccccccC
Confidence 4555 7889999999887 779999999999999999999999953 4455555667789999999999 5543
No 242
>PRK07483 hypothetical protein; Provisional
Probab=99.66 E-value=5.8e-14 Score=163.33 Aligned_cols=344 Identities=16% Similarity=0.183 Sum_probs=211.3
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r 557 (946)
..+|++.+++..++..+. ....+....-+. .+...++.+.|++++. ++. .++.++||.++++++..+|
T Consensus 42 ~~lGh~~p~v~~av~~ql-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~sGsEAve~AlklAr 111 (443)
T PRK07483 42 SCLGHSHPRVIAAIHAQI-DRLAYAHTSFFT--------TEPAEALADRLVAAAPAGLEH-VYFVSGGSEAVEAALKLAR 111 (443)
T ss_pred hccCCCCHHHHHHHHHHH-HhccCccccccC--------CHHHHHHHHHHHHhCCCCCCE-EEEcCCcHHHHHHHHHHHH
Confidence 357777777666666552 221111100010 1234478888888874 343 3668899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCCCC-C------------CHHHHHHH
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGN-I------------NIEELRKA 611 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~g~-~------------D~e~L~~~ 611 (946)
.|...+|.++|.+|| ...++||....+..+.|- .+..++.....+ . .+++++++
T Consensus 112 ~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 191 (443)
T PRK07483 112 QYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAK 191 (443)
T ss_pred HHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHH
Confidence 887666655567777 478899998776554332 123333211000 0 13677776
Q ss_pred HHh-cCCCeEEEEEeCCC--ccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEEEe
Q 002263 612 AEA-NRDNLSTLMVTYPS--THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 677 (946)
Q Consensus 612 i~~-~~~~t~~vvvt~Pn--~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~ 677 (946)
+.+ +.+++++|++..-. ..|++.+ .+++|.++|++||+++|+|.+ +.|+.+.|.+ -+|++++
T Consensus 192 ~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~ 267 (443)
T PRK07483 192 ILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEV----MCGMGRTGTLFACEEDGVAPDLVTI 267 (443)
T ss_pred HHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecc----eeCcccCcHHHHHhhcCCCCCeeee
Confidence 653 34678888887532 2466653 499999999999999999986 5677777643 2699887
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
.|.++ +|--.+|.+.+++++.+.+.... ......+ .+.|+.+.++++.+.|..+-++++.
T Consensus 268 --gK~l~----gG~~Pi~av~~~~~i~~~~~~~~-------------~~~~h~~-T~~gnpl~~aaa~a~l~~i~~~~l~ 327 (443)
T PRK07483 268 --AKGLG----AGYQPIGAVLASDRIYDAIADGS-------------GFFQHGH-TYLGHATACAAALAVQRVIAEDGLL 327 (443)
T ss_pred --hhhhc----cCccccEEEEEcHHHHHHHhcCC-------------CccccCC-CCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 48773 33224778888877765543110 0000011 1345677778888889888877655
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCcee-eeEEEeccccccc--CC-CCHHHHHHHHHHCCcccCCCCC-
Q 002263 758 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HEFIVDLRGLKNT--AG-IEPEDVAKRLMDYGFHGPTMSW- 827 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~-~e~v~~~~~~~~~--~g-~~~~~i~~~L~~~Gi~~~~~~~- 827 (946)
+. .....++|.++|++. +.++ ..|. |... -+++-+ +..+.. .. .....+.+++.++|+.+.....
T Consensus 328 ~~---~~~~g~~l~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~ 402 (443)
T PRK07483 328 AN---VRARGEQLRARLRERLGQHPHVGDIRGR-GLFVGVELVAD-RATKAPFDPALKLHARIKREAMARGLMVYPMGGT 402 (443)
T ss_pred HH---HHHHHHHHHHHHHHHHhcCCCeeeEeec-ccEEEEEEeec-ccccCCCCchhhHHHHHHHHHHHCCcEEEecCcc
Confidence 44 346678888888653 3321 2232 3221 122111 100000 00 1135688889999998742211
Q ss_pred ---CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 828 ---PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 828 ---p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.+++||+.|+...|++|||+++++|.+++.++..
T Consensus 403 ~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 403 IDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred ccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11368999999999999999999999999887654
No 243
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.66 E-value=1.7e-14 Score=165.14 Aligned_cols=309 Identities=16% Similarity=0.100 Sum_probs=187.7
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
..++++.+++++|.+.+ +.+++|++|... +++.+ +.+++++||++...|.++...+...|++++.++++++
T Consensus 35 ~~~le~~la~~~g~~~~-v~~~sgt~al~l---al~al----~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQHA-IAVSSATAGMHI---TLMAL----GIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHH---HHHHc----CCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCc
Confidence 45788999999998854 445667665533 33332 1235689999998888777778889999999999865
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccCCCEEEeCC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNL 679 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~GaDi~~~s~ 679 (946)
+.+|+++++++++ ++|++|+.+++ +|... |+++|+++|+++|+++++|+|+..+..-. ...+.+|.|+..++.
T Consensus 107 ~~~d~~~l~~~i~---~~tkav~~~~~--~G~~~-d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~ 180 (379)
T PRK11658 107 LMVTPEAIEAAIT---PRTKAIIPVHY--AGAPA-DLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHA 180 (379)
T ss_pred CCcCHHHHHHhcc---cCCeEEEEeCC--CCCcC-CHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCC
Confidence 4699999999997 78999887765 68887 89999999999999999999975322111 124667877766666
Q ss_pred CcccccCCCCCCCcceeEEEe-cccCCCCCC-CccccCCCC-C--CCCC--CCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 680 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI-P--APEK--SQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~~d~-~--~~~~--~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
+|.++ + +..|+++++ +++...+.. +..|...+. . ..+. ......+..++.-+.+. +|..+ ..
T Consensus 181 ~K~l~-----~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~--AAl~~---~q 249 (379)
T PRK11658 181 IKNIT-----C-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADIN--AAIAL---VQ 249 (379)
T ss_pred CCcCc-----c-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHH--HHHHH---HH
Confidence 67663 2 234566664 444333211 011111110 0 0000 00000000000001122 22222 22
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc-CC-eeeccCC-CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC---
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH-YP-ILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--- 826 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~-~~-v~~~~~~-~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~--- 826 (946)
.+++.+..++...+++++.+.|++. +. +..+... ....+.+++.++. ...+.+.+++.++|.++||.+....
T Consensus 250 l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~L~~~gI~~~~~~~~~ 327 (379)
T PRK11658 250 LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDE--ERCGISRDALMEALKERGIGTGLHFRAA 327 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECC--ccccCCHHHHHHHHHHCCCCCcccCcCc
Confidence 3566777777778888888999874 22 1111111 1123445554431 0124578899999999998754211
Q ss_pred --------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 827 --------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 827 --------------~p~-----~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+|. ...+.+-.....|.+|+++++++|+++.
T Consensus 328 ~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 328 HTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred ccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 221 1345554555678999999999998864
No 244
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.66 E-value=2.2e-15 Score=160.67 Aligned_cols=314 Identities=15% Similarity=0.170 Sum_probs=207.6
Q ss_pred eeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHH
Q 002263 56 KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC 135 (946)
Q Consensus 56 ~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la 135 (946)
++|+|++-+|...-+.- +.+- +.+-.. ..-+-..|.-+-..+++..+|+|-+-+. +-++.+.--|..+.+..
T Consensus 179 NDYLgms~Hp~V~~A~~-~tl~-~hG~GA----GGTRNIsG~s~~hv~LE~eLA~LHqK~a--ALlFsSCfVANDstLft 250 (570)
T KOG1360|consen 179 NDYLGMSRHPEVLDAMH-DTLD-RHGAGA----GGTRNISGHSKHHVRLEAELADLHQKEA--ALLFSSCFVANDSTLFT 250 (570)
T ss_pred CccccccCChHHHHHHH-HHHH-HcCCCc----CCccccCCCCchhhhHHHHHHHHhcCcc--eeeeeeeeeccchHHHH
Confidence 57999997764433332 2222 222111 1223334566667788899999999887 55555555455555433
Q ss_pred hccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccccccc-c---CC-CEeEEEEEcC-CCceeecchHHHHHH
Q 002263 136 NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SG-DVCGVLVQYP-GTEGEVLDYGDFIKN 209 (946)
Q Consensus 136 ~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-i---~~-~t~~v~v~~p-n~~G~i~di~~i~~~ 209 (946)
+. ++-|+-+|+.+...|.|.+..++. +.--.+.+++.|+++|++ + ++ -.+.|.+... ++.|.|.||+||+++
T Consensus 251 La-k~lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDv 328 (570)
T KOG1360|consen 251 LA-KKLPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDV 328 (570)
T ss_pred HH-HHCCCcEEeccccchHHHHHHhhh-cCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHH
Confidence 22 112788999999999999999975 334567788889988876 3 33 3566777654 789999999999999
Q ss_pred HHhCCcEEEEEecCccccCCCCCCC---------ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEe
Q 002263 210 AHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 279 (946)
Q Consensus 210 a~~~gal~~v~a~~~al~~l~~~~~---------~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s 279 (946)
+|++|++..++ ..++.|+..+-|. --+||+.|+. |.||. .| |+++.+..+++-+...
T Consensus 329 ah~yGAiTFlD-EVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc---VG----GYIAat~~LvDmiRSy----- 395 (570)
T KOG1360|consen 329 AHKYGAITFLD-EVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC---VG----GYIAATRKLVDMIRSY----- 395 (570)
T ss_pred HHHhCceeeee-hhhhhccccCCCCCccccCCcchhhhhcccchhhhccc---cc----ceehhhhhHHHHHHHh-----
Confidence 99999999993 4566666544321 2379999997 99974 23 6898888776644211
Q ss_pred ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC
Q 002263 280 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG 359 (946)
Q Consensus 280 ~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~ 359 (946)
.++|.++- |- .+..+.+...++- -+-..+|. .+++...++..|+++.|.++| +.++.
T Consensus 396 -----AaGFIFTT-------------SL--PP~vl~GAleaVr-~lk~~eg~-~lR~~hqrnv~~~kq~l~~~G-iPVi~ 452 (570)
T KOG1360|consen 396 -----AAGFIFTT-------------SL--PPMVLAGALEAVR-ILKSEEGR-VLRRQHQRNVKYVKQLLMELG-IPVIP 452 (570)
T ss_pred -----cCceEEec-------------CC--ChHHHHhHHHHHH-HHhhhhhH-HHHHHHHHHHHHHHHHHHHcC-CcccC
Confidence 11233321 00 0123445555551 12234453 455566788999999999999 88874
Q ss_pred CCCcCeEEEecCC---HHHHHHHHHH-cCCeeeeec-------CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 360 LPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 360 ~~~~~~~~i~~~~---~~~v~~~L~~-~GI~~~~~~-------~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.+ .+++-+.+.+ +.++.+.|.. +||++..+. ...+||.+|+.+|.+-.+.|++++.
T Consensus 453 ~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 453 NP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred CC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 32 3455555554 6778888874 599885431 3679999999999999999998885
No 245
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.66 E-value=3.9e-14 Score=163.79 Aligned_cols=287 Identities=16% Similarity=0.208 Sum_probs=183.2
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcC-----------
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG----------- 589 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G----------- 589 (946)
..++.+.|+++.+.+.+ ++.++|++++++++..+|.|...++..++++|+ +..+.||....+..+.|
T Consensus 84 ~~~l~~~l~~~~~~~~~-~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~ 162 (403)
T PRK05093 84 ALRLAKKLIDATFAERV-FFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPK 162 (403)
T ss_pred HHHHHHHHHhhCCCCEE-EEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCC
Confidence 34788999998876544 667899999999988888875432222344555 67789998875544322
Q ss_pred -CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCc-ccccc---cCHHHHHHHHHHcCCEEEEecccccccccc
Q 002263 590 -MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 664 (946)
Q Consensus 590 -~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~-~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl 664 (946)
.+++.++. .|++++++++. +++++|+++..+. .|++. ..+++|+++|++||+++++|.++. ++
T Consensus 163 ~~~~~~~~~-----~d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~----g~ 230 (403)
T PRK05093 163 PADITHVPF-----NDLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT----GM 230 (403)
T ss_pred CCCcEEeCC-----CCHHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh----CC
Confidence 12344443 38999999996 6899999885454 45553 249999999999999999999864 22
Q ss_pred cCCC------cc--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 665 TSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 665 ~~pg------~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
.+.| .. .+|+.++ .|+++ +|..+|++.+++++.+.+.... .. ...++
T Consensus 231 g~~g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~vv~~~~i~~~l~~~~-------------~~-~t~~~---- 285 (403)
T PRK05093 231 GRTGDLFAYMHYGVTPDILTS--AKALG-----GGFPIGAMLTTAEIASHFKVGT-------------HG-STYGG---- 285 (403)
T ss_pred CCCccchhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhhcCCCC-------------CC-CCCCC----
Confidence 2222 12 3676654 58874 4577999999888766553211 00 11122
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 811 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i 811 (946)
+....+++.+.|..+-.+.+ .++...+.+++.++|++. +.+. .++ .+.. +.+.+.+ .......++
T Consensus 286 ~~~~~~aa~a~L~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~G~~---~~~~l~~---~~~~~~~~~ 355 (403)
T PRK05093 286 NPLACAVAEAVFDIINTPEV---LEGVKARRQRFVDGLQKINQKYGVFSEIRG-MGLL---IGAELKP---QYKGRARDF 355 (403)
T ss_pred CHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCeEeEee-CceE---EEEEecC---cchhHHHHH
Confidence 23333444454555433333 344556778888888774 2221 111 1211 2333321 000145789
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 812 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 812 ~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+++|.++|+.+.... .+.+|++|+...++++|+++++.|.+++++
T Consensus 356 ~~~l~~~Gv~v~~~g---~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 356 LNAAAEEGVMVLVAG---PDVLRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred HHHHHHCCeEEecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999998864221 378999999999999999999999988765
No 246
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.66 E-value=2.2e-14 Score=164.68 Aligned_cols=308 Identities=15% Similarity=0.114 Sum_probs=185.2
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-C
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~ 600 (946)
..++++.+++++|.+.. +..++|+++... +++.+ +.+++++|++|...|......+...|++++.+++++ +
T Consensus 31 ~~~le~~la~~~g~~~~-v~~~sgt~al~~---~l~al----~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKYA-VAFNSATSALHI---ACLAL----GVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCeE-EEEcCHHHHHHH---HHHHc----CCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCc
Confidence 35678899999998754 344566655433 33332 123568999999877776667888999999999965 5
Q ss_pred CCCCHHHHHHHHHhcC-CCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC----CEE
Q 002263 601 GNINIEELRKAAEANR-DNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA----DVC 675 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga----Di~ 675 (946)
+.+|++++++++++++ ++|++|+++++ +|... ++++|+++|+++|+++++|+++..+.. + ....+|. |+.
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~~--~G~~~-~~~~i~~l~~~~~~~lI~D~a~a~g~~-~-~~~~~g~~~~~d~~ 177 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVDF--AGKSV-DMQAIAALAKKHGLKIIEDASHALGAE-Y-GGKPVGNCRYADAT 177 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeCC--CCccC-CHHHHHHHHHHcCCEEEEECCCcccCc-c-CCEeCCCccccceE
Confidence 7899999999996321 47888888765 68777 799999999999999999999864321 1 1122344 999
Q ss_pred EeCCC--cccccCCCCCCCcceeEEEe-cccCCCCCC-CccccCCCC---CCC-CCC-C-CCCCcccCccchhhHHHHHH
Q 002263 676 HLNLH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI---PAP-EKS-Q-PLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 676 ~~s~h--K~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~~d~---~~~-~~~-~-~~~~i~~~~~g~~~~~~~a~ 745 (946)
++|+| |+++.+ ..|++.++ +.+.+.+.. +..|...+. ... ... . ....+..+..-+...++...
T Consensus 178 ~~S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~ 251 (380)
T TIGR03588 178 VFSFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGL 251 (380)
T ss_pred EEecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHH
Confidence 99998 777432 23455554 444332210 000110000 000 000 0 00000000000111111122
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccC--CeeeccCC-CceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHY--PILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~--~v~~~~~~-~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
+.| +.+.+..++..++++++.+.|+++. .+...... ....+.+++.+.. ..+.+.+++.+.|.++||.+
T Consensus 252 ~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~r~~l~~~L~~~gI~~ 323 (380)
T TIGR03588 252 SQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQ---EFGCTRKEVFEALRAAGIGV 323 (380)
T ss_pred HHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECC---cCCCCHHHHHHHHHHCCCCc
Confidence 222 2355666677788999999998752 22111101 1123344444431 12467899999999999976
Q ss_pred CCCCCCC----------------------CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 823 PTMSWPV----------------------PGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 823 ~~~~~p~----------------------~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+....|+ ...|.+.+....|++|+++++++|+++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 324 QVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred ccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 4322121 145777777778999999999999876
No 247
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.66 E-value=3.6e-14 Score=161.53 Aligned_cols=271 Identities=20% Similarity=0.131 Sum_probs=180.3
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccccc-
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID- 180 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~- 180 (946)
.++++.+|++.+ .++.++.+|++++.+++.++ ++ +||+||++...|..+...++..++..|++++.++.++..
T Consensus 54 ~~Le~~lA~l~~---~~~v~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~ 127 (366)
T PRK07582 54 RALEAALGELEG---AEALVFPSGMAAITAVLRAL-LR--PGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE 127 (366)
T ss_pred HHHHHHHHHHcC---CCEEEECCHHHHHHHHHHHh-cC--CCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH
Confidence 346678999993 34678888888777766665 33 899999999988777666544445689999999875433
Q ss_pred ccCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCCCce
Q 002263 181 YKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHA 258 (946)
Q Consensus 181 ~i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~ 258 (946)
.+.++|++|++.+| |.+|.+.|+++|+++||++|++++||. .++......|.++|+|++++|. |++++|- |--+
T Consensus 128 ~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~-t~~~~~~~~p~~~g~Divv~S~sK~l~G~~---g~~~ 203 (366)
T PRK07582 128 AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDN-TTATPLGQRPLELGADLVVASDTKALTGHS---DLLL 203 (366)
T ss_pred HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEEC-CCCCccccCchhcCCcEEEecccccccCCC---CeeE
Confidence 24468999999998 578999999999999999999999943 2222222345678999999998 7765331 1125
Q ss_pred EEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHH
Q 002263 259 AFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 337 (946)
Q Consensus 259 g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~ 337 (946)
|+++++ +++.+++.. .++..|. +.+++- + |+...|-+-++...++
T Consensus 204 G~v~~~~~~l~~~l~~-------------------------~~~~~g~----~~~~~~---a--~l~~r~l~tl~~R~~~ 249 (366)
T PRK07582 204 GYVAGRDPELMAAVER-------------------------WRLLAGA----IPGPFE---A--WLAHRSLGTLGLRFAR 249 (366)
T ss_pred EEEEcCcHHHHHHHHH-------------------------HHHHhCC----CCCHHH---H--HHHHhccccHHHHHHH
Confidence 888875 455443310 0010010 001111 1 1233333445555677
Q ss_pred HHHHHHHHHHHHhcCCCEEEcC------CC-----------CcCeEEEecCCHHHHHHHHHHcCCeee--------e---
Q 002263 338 VHGLAGTFALGLKKLGTVEVQG------LP-----------FFDTVKVKCADAHAIASAAYKIEMNLR--------V--- 389 (946)
Q Consensus 338 ~~~~a~~l~~~L~~~g~~~~~~------~~-----------~~~~~~i~~~~~~~v~~~L~~~GI~~~--------~--- 389 (946)
..+++..+++.|++...++-+. .+ +...|+|.+++.+++.+.|...++... .
T Consensus 250 ~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 250 QCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccchhh
Confidence 7889999999999874343221 12 223577777665556666666566432 1
Q ss_pred --------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 --------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 --------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++..+.++.|++|.++|.
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 124679999999999999999999985
No 248
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.66 E-value=2.2e-14 Score=162.78 Aligned_cols=298 Identities=16% Similarity=0.182 Sum_probs=185.0
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|.+ .. .+..++|++. ++.++++.+. ..|+ ++++|+++...+..+...+...|+++
T Consensus 36 ~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~--ai~~~~~~~~-~~g~-~~d~Vl~~~p~y~~~~~~~~~~g~~~ 111 (350)
T TIGR03537 36 LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE--AIFHFPLVFI-DPEE-DRRRVIFGTPGYPVYERGALFAGGEP 111 (350)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHHc-CCCC-CCceEEEcCCCCcchHHHHHhcCCEE
Confidence 676677777777777666754 33 5666666652 2333333332 2231 34689999998888888899999999
Q ss_pred EEEcCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccccccccCC
Q 002263 593 VSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 667 (946)
Q Consensus 593 v~v~~~~-~-g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p 667 (946)
+.++.++ + ..+|+++++++++ ++++++++++| |.+|.+-+ .+++|+++|+++|+++++|.++.....+-..+
T Consensus 112 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 188 (350)
T TIGR03537 112 TAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPH 188 (350)
T ss_pred EEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCC
Confidence 9999964 3 4589999999997 67889999999 57998762 39999999999999999999863211110111
Q ss_pred --CccCCC--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 668 --GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 668 --g~~GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
..++.| +++.+++|+|+.| |.++|++..++++...+... +....++++...+. +
T Consensus 189 ~~~~~~~~~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~q~----~ 246 (350)
T TIGR03537 189 SALEVGIENVLAFHSLSKRSGMT----GYRSGFVAGDEKLISFLRKL--------------RANFGVASPDFVQA----A 246 (350)
T ss_pred chhhcCcCCEEEEeecccccCCc----cccceeeecCHHHHHHHHHH--------------HHhhccCCCHHHHH----H
Confidence 112333 6667889988543 67799998776655433210 00011222111111 1
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
+.+.+ ...+.+++..++...+.+++.+.|++. +++. .+.+.++ +.++++. +.+..++.+.|.++|+.+
T Consensus 247 ~~~~l--~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~--~~~g~~~--~~~~~~~-----~~~~~~l~~~L~~~gv~v 315 (350)
T TIGR03537 247 AKAAW--SDDNHVLERRKIFKRKRDLFIEFFNKVGLEYL--YPDATFY--LWVKVPS-----GIDAKDYALRLLENGIVV 315 (350)
T ss_pred HHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeEEE--EEEECCC-----CCCHHHHHHHHHHCCEEE
Confidence 11111 122334444555556677788888764 3322 1222221 3456542 357789999999999986
Q ss_pred CC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 823 PT-MSWP--VPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 823 ~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.. ..|. ..+++||++. .+.+++++.++.|++
T Consensus 316 ~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 316 APGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred cCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 43 2343 2578999975 457777777766653
No 249
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.66 E-value=1.7e-14 Score=166.27 Aligned_cols=300 Identities=17% Similarity=0.168 Sum_probs=184.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+.+|.. ...+..++| +++. .++++.+. .+++.|++++..|......+...|+++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al---~~~~~~l~-----~~g~~Vlv~~p~y~~~~~~~~~~g~~~ 141 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEAT---YLAFESLL-----EEGDEVIIPDPAFVCYVEDAKIAEAKP 141 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHH---HHHHHHhc-----CCCCEEEEcCCCCcccHHHHHHcCCEE
Confidence 576666666666666655643 334444444 4343 23333321 246789999998888888888999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEeccccccc-cc--
Q 002263 593 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VG-- 663 (946)
Q Consensus 593 v~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~-~g-- 663 (946)
+.++++++ +.+|+++++++++ +++++|++++| |.+|.+. + +++|+++|+++|+++++|.++..-. .+
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (391)
T PRK08361 142 IRIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAK 217 (391)
T ss_pred EEEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCC
Confidence 99999764 4699999999997 67889999999 4689887 5 8999999999999999999863211 01
Q ss_pred ccCCCc--cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 664 LTSPGY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 664 l~~pg~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
...... ..-++++.+++|+|+.| |.++|++.+++++...+-.. ......+++ ....
T Consensus 218 ~~~~~~~~~~~~i~~~s~SK~~~~~----GlRiG~~~~~~~~~~~~~~~------------~~~~~~~~~------~~~q 275 (391)
T PRK08361 218 HYPMIKYAPDNTILANSFSKTFAMT----GWRLGFVIAPEQVIKDMIKL------------HAYIIGNVA------SFVQ 275 (391)
T ss_pred CCCHhhcCCCCEEEEecCchhcCCc----HhhhhhhccCHHHHHHHHHH------------HhhhccCCC------hHHH
Confidence 001111 12457788999998543 45689999887665432100 000011111 1111
Q ss_pred HHHHHHHHHHcH--hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HC
Q 002263 742 PISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 818 (946)
Q Consensus 742 ~~a~a~l~~lG~--eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~ 818 (946)
.++...+. .+. +.+++..+...++.+.+.+.|++...+.+..+++.++ ++++++. .+.+..+++++|. ++
T Consensus 276 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~--~~~~l~~----~~~~~~~l~~~l~~~~ 348 (391)
T PRK08361 276 IAGIEALR-SKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY--VFANIDE----TGMSSEDFAEWLLEKA 348 (391)
T ss_pred HHHHHHhc-CCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE--EEEECCC----CCCCHHHHHHHHHHhC
Confidence 11111121 121 2355555666677788888887742332222223221 3455542 2457889999887 57
Q ss_pred CcccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 819 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 819 Gi~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
|+.+.. ..|. ..+++||++.. +.++++..++.|+++++
T Consensus 349 gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 349 RVVVIPGTAFGKAGEGYIRISYAT--SKEKLIEAMERMEKALE 389 (391)
T ss_pred CEEEcCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 998643 2232 24789999874 56667777776666543
No 250
>PRK07481 hypothetical protein; Provisional
Probab=99.66 E-value=4.1e-14 Score=165.00 Aligned_cols=340 Identities=17% Similarity=0.194 Sum_probs=206.2
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC---CCcccccCCchHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVI 556 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~a~ 556 (946)
..+|++.+.+..++..+... ..+.. ++. .-..+...++.+.|+++++ ++. .++.++|+.++++++..+
T Consensus 54 ~~lGh~~p~v~~Ai~~ql~~-~~~~~--~~~-----~~~~~~~~~lae~L~~~~~~~~~~~-v~f~~sGsEAve~AlklA 124 (449)
T PRK07481 54 VNVGHNREEVKEAIVRQLDE-LEYYS--TFD-----GTTHPRAIELSYELIDMFAPEGMRR-VFFSSGGSDSVETALKLA 124 (449)
T ss_pred hcCCCCCHHHHHHHHHHHHh-cccee--ccc-----ccCCHHHHHHHHHHHHhcCCCCCCE-EEEcCchHHHHHHHHHHH
Confidence 35788877777666665321 11111 110 0011234578888989874 333 366889999999999999
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCC-----CCCCHHH--------HHH
Q 002263 557 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----GNINIEE--------LRK 610 (946)
Q Consensus 557 r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~-----g~~D~e~--------L~~ 610 (946)
|.|...+|.++|.+|+ ...++||....+....|- .+..++.... +..|+++ +++
T Consensus 125 r~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~ 204 (449)
T PRK07481 125 RQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLER 204 (449)
T ss_pred HHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHH
Confidence 9987666654566666 567899987765443221 1233332110 1124444 344
Q ss_pred HHH-hcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEe
Q 002263 611 AAE-ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHL 677 (946)
Q Consensus 611 ~i~-~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~ 677 (946)
.+. ++.+++++|+++.- +..|++.+ .++++.++|++||+++|+|.+ +.|+.+.|.+ | +|++++
T Consensus 205 ~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~ 280 (449)
T PRK07481 205 EIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEV----VTGFGRTGSWFGSRGWGVKPDIMCL 280 (449)
T ss_pred HHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeeh----hhCcCcCchhhHhhhcCCCCCEEEE
Confidence 443 23467999988754 34566653 399999999999999999986 4566666542 2 699887
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
.|.++ +|.-.+|.+++++++.+.+..... ......... .+.|+.+.++++.+.|..+.++++.
T Consensus 281 --gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~----------~~~~~~h~~-T~~gnpl~~aaa~a~L~~l~~~~l~ 343 (449)
T PRK07481 281 --AKGIT----SGYVPLGATMVNARIADAFEANAD----------FGGAIMHGY-TYSGHPVACAAALATLDIVVREDLP 343 (449)
T ss_pred --eeccc----CCCcCceEEEEcHHHHHHHhccCc----------cccccccCC-CCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 48773 332247778888776654421100 000000111 1445777788888999988777655
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccc---cccCC---CCHHHHHHHHHHCCcccCCCC
Q 002263 758 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL---KNTAG---IEPEDVAKRLMDYGFHGPTMS 826 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~---~~~~g---~~~~~i~~~L~~~Gi~~~~~~ 826 (946)
+. .....++|.++|++. +.+. ..|. |.. +-+++... +.... .....+.++|.++|+.+...
T Consensus 344 ~~---~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Glm---~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~- 415 (449)
T PRK07481 344 AN---AAKRGAYLLEGLQPLKERFELVGDVRGK-GLM---LALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS- 415 (449)
T ss_pred HH---HHHHHHHHHHHHHHHhhcCCCeEEEeec-ceE---EEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec-
Confidence 43 345677888888764 3321 2221 322 12222100 00000 11356888889999987532
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 827 WPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 827 ~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+.++++|....|++|||+++++|.++++++
T Consensus 416 ---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 416 ---GTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999988764
No 251
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=5.6e-14 Score=163.64 Aligned_cols=334 Identities=18% Similarity=0.236 Sum_probs=202.6
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.+|++.+++..++..+. ....+... .+. ..+...++.+.|+++++-. ...++.++|+.++++++..+|.
T Consensus 55 ~lGH~~p~v~~Ai~~ql-~~~~~~~~-~~~-------~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~ 125 (445)
T PRK08593 55 NVGHAPPRVVEAIKAQA-DKFIHYTP-AYM-------YHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARA 125 (445)
T ss_pred cCCCCCHHHHHHHHHHH-HhccCccc-ccc-------CCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHH
Confidence 57888777666666553 21111110 000 1133457888999988532 2346678999999888888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCCC-----CCC-------HHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKG-----NIN-------IEELRKAA 612 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~g-----~~D-------~e~L~~~i 612 (946)
|. +|.+|| ...++||....+....+. .++.+|..... ..+ ++++++.+
T Consensus 126 ~t------gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK08593 126 YT------GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMF 199 (445)
T ss_pred hh------CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHH
Confidence 62 345566 567899988776544331 13445542211 111 24566655
Q ss_pred Hhc--CCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeC
Q 002263 613 EAN--RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLN 678 (946)
Q Consensus 613 ~~~--~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s 678 (946)
+++ .+++++|+++.. +..|++.+ .+++|.++|++||+++++|+++ .|+.+.|.+ | +|++++
T Consensus 200 ~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~----tg~GrtG~~~a~~~~gv~pDi~t~- 274 (445)
T PRK08593 200 EKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQ----QGLGRTGKWSSISHFNITPDLMSF- 274 (445)
T ss_pred HhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCchHHHHHhcCCCCCEeee-
Confidence 432 367888888765 45577642 3999999999999999999874 345445432 3 688766
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
.|.++ ||-.+|.+++++++.+.+.... .... +.++.+.++++.+.|..+-++++.
T Consensus 275 -gK~l~-----~G~p~gav~~~~~i~~~~~~~~--------------~~~T----~~~~pl~~aaa~a~l~~l~~~~l~- 329 (445)
T PRK08593 275 -GKSLA-----GGMPMSAIVGRKEIMESLEAPA--------------HLFT----TGANPVSCAAALATIDMIEDESLL- 329 (445)
T ss_pred -ccccc-----CCcccEEEEEcHHHHhhhccCC--------------CCCC----CCCCHHHHHHHHHHHHHHHhccHH-
Confidence 48773 3445778888888776553110 0011 223555666777888887665443
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEeccc-ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 002263 759 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 832 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~-~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~ 832 (946)
++...+.++|.++|+++ +.+. ..|. |... .+-+.... ...........+.++|.++|+.+.... .+.
T Consensus 330 --~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl~~-gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---~~~ 402 (445)
T PRK08593 330 --QRSAEKGEYARKRFDQWVSKYNFVGDVRGY-GLSI-GIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA---GNV 402 (445)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCcEEEEecc-ceEE-EEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---CCE
Confidence 34456677888888764 3321 1221 2221 11111110 000000124578889999999874332 378
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 002263 833 LMIEPTESESKEELDRYCDALISIREEIAQIENGKAD 869 (946)
Q Consensus 833 lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~ 869 (946)
+|+.|+..+|++|||++++++.++++++. +|++|
T Consensus 403 lr~~p~l~~t~~~id~~~~~l~~~l~~~~---~~~~~ 436 (445)
T PRK08593 403 LRFQPPLVITYEQLDTALNTIEQAFTALE---AGKLD 436 (445)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHh---ccccC
Confidence 99999999999999999999999987754 45554
No 252
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.65 E-value=1.1e-14 Score=165.42 Aligned_cols=283 Identities=17% Similarity=0.210 Sum_probs=184.5
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.++.+...+..++|++. +..++++.+. .++++|++++..|+.+...++..|++++.++.++++.
T Consensus 63 ~~lr~aia~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 135 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQVFVGNGSDE--VLAHAFLAFF-----NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFS 135 (353)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 37788899999987766666666542 3334444432 2568899999877667777889999999999988888
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc-CCEEEEecccccccccccC-C--CccCCCEEEe
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTS-P--GYIGADVCHL 677 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~-g~ll~vD~a~~~a~~gl~~-p--g~~GaDi~~~ 677 (946)
+|++++++ ++++|++++| |.+|.+. +.+++.++++.+ |+++++|.++.. +++-.. + ....-.+++.
T Consensus 136 ~d~~~l~~-------~~~~v~~~~P~NPtG~~~-~~~~~~~l~~~~~~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~ 206 (353)
T PRK05387 136 IDVEDYLR-------PNGGIIFPNPNAPTGIAL-PLAEIERILAANPDSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQ 206 (353)
T ss_pred CCHHHHHh-------cCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCcEEEEeCcccc-cCCcchHHHHhhCCCEEEEE
Confidence 99998863 2356888899 4799998 689999998876 999999998632 222110 0 1122357778
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
+++|+|++| |.++|++++++++.+.+... + ......+.+..++ .++...+. ..+.++
T Consensus 207 S~SK~~~~~----GlR~G~~~~~~~~~~~l~~~------------~-~~~~~~~~~~~~q----~~~~~~l~--~~~~~~ 263 (353)
T PRK05387 207 TFSKSRSLA----GLRVGFAIGHPELIEALNRV------------K-NSFNSYPLDRLAQ----AGAIAAIE--DEAYFE 263 (353)
T ss_pred ehhHhhcch----hhhceeeecCHHHHHHHHHh------------h-ccCCCCCcCHHHH----HHHHHHhc--CHHHHH
Confidence 889988654 68899999887665443210 0 0001111111111 11112221 233355
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-CCCEEEE
Q 002263 758 EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGTLMI 835 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p-~~~~lri 835 (946)
+..++...+.+++.+.|++. +.+ .+ +.+.+ +.+..+ +.+..++.++|.++||.+.....+ ..+++|+
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~g~~~-~~-~~~~~---~~~~~~------~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 332 (353)
T PRK05387 264 ETRAKVIATRERLVEELEALGFEV-LP-SKANF---VFARHP------SHDAAELAAKLRERGIIVRHFNKPRIDQFLRI 332 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeE-CC-CcCcE---EEEECC------CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEE
Confidence 56666677888899999875 332 22 12221 334433 357789999999999987543322 3578999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
++. +.+++++++++|++++.
T Consensus 333 s~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 333 TIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EeC---CHHHHHHHHHHHHHHhh
Confidence 985 67999999999988754
No 253
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.65 E-value=2.1e-14 Score=162.96 Aligned_cols=283 Identities=18% Similarity=0.195 Sum_probs=183.4
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.++++++.+...+..++|++. +..++++.+. .++++|+++...++.+...++..|.+++.++.++++.
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~--~l~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDE--IIHLIMLAFI-----NKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 46778888888887655556666653 2223334332 2568899988766555556788999999999987788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccC-C--CccCCCEEEeC
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-P--GYIGADVCHLN 678 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~-p--g~~GaDi~~~s 678 (946)
+|+++++++++. .++++|++++| |.+|.+- +.+++.+++++++.++++|+++.. +.+-.. + ....--+++.|
T Consensus 135 ~d~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~~~~~~~~~~~vi~~~S 210 (351)
T PRK14807 135 YDVGSFIKVIEK--YQPKLVFLCNPNNPTGSVI-EREDIIKIIEKSRGIVVVDEAYFE-FYGNTIVDVINEFENLIVLRT 210 (351)
T ss_pred CCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEeCcchh-hcccchHHHhhhCCCEEEEec
Confidence 999999999962 47889999999 4799998 799999999998999999998742 211111 1 11122366778
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
++|+|+.| |.++|++..++++...+... +...+++ ...+. ++..++. ...+.+
T Consensus 211 ~SK~~~~~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~--~~~q~----~~~~~l~---~~~~~~ 263 (351)
T PRK14807 211 LSKAFGLA----GLRVGYAVANENILKYLNLV--------------KSPYNIN--SLSQV----IALKVLR---TGVLKE 263 (351)
T ss_pred chHhcccc----hhceeeeecCHHHHHHHHHc--------------cCCCCcC--HHHHH----HHHHHHh---HHHHHH
Confidence 88988644 78899999877665543210 0001111 11111 1222332 223444
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC--CCCCCEEEEE
Q 002263 759 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--WPVPGTLMIE 836 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~--~p~~~~lri~ 836 (946)
..+....+.+++.+.|++...+.+..+.+.+ ++++++ +..++.+.|.++|+.+.... +...+++||+
T Consensus 264 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~---~~i~~~--------~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis 332 (351)
T PRK14807 264 RVNYILNERERLIKELSKIPGIKVYPSKTNF---ILVKFK--------DADYVYQGLLERGILVRDFSKVEGLEGALRIT 332 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECcCCccE---EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEE
Confidence 4455556677888888764232222222322 345543 46789999999999864332 2235789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALISIR 857 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~~i~ 857 (946)
+. +.++.++|+++|++++
T Consensus 333 ~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 333 VS---SCEANDYLINGLKELL 350 (351)
T ss_pred cC---CHHHHHHHHHHHHHhh
Confidence 85 5788999999998753
No 254
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.65 E-value=3.6e-14 Score=163.43 Aligned_cols=305 Identities=16% Similarity=0.172 Sum_probs=184.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---cccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD---SFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~---~~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++....|.. ...+.. ++++++...+ ++... .++++|+++++.|+.+...++..|.+
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~---~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 138 (391)
T PRK07309 67 AGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSAS---LTAIL-----EPGDKVLLPAPAYPGYEPIVNLVGAE 138 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH---HHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCE
Confidence 465555555666665555653 123334 4444444332 33321 25688999998888887788899999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccc-
Q 002263 592 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT- 665 (946)
Q Consensus 592 vv~v~~~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~- 665 (946)
++.++.+++ +.+|+++|++++++..+++++|++++| |.+|+.- .++++|+++|++||+++++|+++..-. .+-.
T Consensus 139 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~ 218 (391)
T PRK07309 139 IVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218 (391)
T ss_pred EEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCC
Confidence 999998764 479999999999754457899999998 5789864 259999999999999999999864211 0100
Q ss_pred CC-CccCCC--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHH
Q 002263 666 SP-GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 666 ~p-g~~GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
.+ ..+..| +++.|++|+|+.| |.++|++++++++.+.+-.. ... ...+++ .....
T Consensus 219 ~~~~~~~~~~~i~~~S~SK~~g~~----GlRvG~~v~~~~~~~~~~~~------------~~~--~~~~~~----~~~q~ 276 (391)
T PRK07309 219 VSIAEYLPDQTILINGLSKSHAMT----GWRIGLIFAPAEFTAQLIKS------------HQY--LVTAAT----TMAQF 276 (391)
T ss_pred CCHHHhccCCEEEEecChhhccCc----cceeEEEEeCHHHHHHHHHH------------Hhh--cccCCC----hHHHH
Confidence 01 111223 6778899998654 67899999987765543210 000 011111 11111
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCc
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 820 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi 820 (946)
++..++. .+..-.....+...++.+++.+.|++. +.+. .+.+.++ ++++++. ..+.+..+++++|. ++|+
T Consensus 277 ~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~gg~~--~~~~l~~---~~~~~~~~~~~~l~~~~gv 348 (391)
T PRK07309 277 AAVEALT-NGKDDALPMKKEYIKRRDYIIEKMTDLGFKII--KPDGAFY--IFAKIPA---GYNQDSFKFLQDFARKKAV 348 (391)
T ss_pred HHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHHHCCCeec--CCCeeEE--EEEECCC---CCCCCHHHHHHHHHHhCCE
Confidence 1222222 122112233344456777888888775 3321 1222221 2345442 01235678888765 6899
Q ss_pred ccC-CCCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 821 HGP-TMSW-P-VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 821 ~~~-~~~~-p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+. ...| + ..+.+||++.. +.+++++.++.|++++++.
T Consensus 349 ~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 349 AFIPGAAFGPYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 853 2223 2 25789999874 5788999999988877653
No 255
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.65 E-value=4.8e-14 Score=161.94 Aligned_cols=277 Identities=17% Similarity=0.196 Sum_probs=177.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
..+|......++++.+++++|.+ ...++.+|+.+..+++.++ . ++||+|++++..|+++...++ ..|.+++
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~g~~~~~~~l~~~-~--~~gd~V~~~~~~~~~~~~~~~----~~g~~~~ 148 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFGAE--RALLFSSGYAANLAVLTAL-A--GKGDLIVSDKLNHASLIDGAR----LSRARVR 148 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHh-C--CCCCEEEEeCccCHHHHHHHH----hcCCceE
Confidence 44555566778889999999954 3556666776555443333 2 389999999999999988764 2466776
Q ss_pred Eecc---ccccc-cCC---CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC----------CCC
Q 002263 173 VSDL---KDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGE 234 (946)
Q Consensus 173 ~~~~---~~l~~-i~~---~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~----------~~~ 234 (946)
.++. +++++ +++ +++++++..+ |.+|.+.|+++|+++||++|+++++| +..+.+.+.. ...
T Consensus 149 ~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~D-e~~~~g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 149 RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVD-EAHGTGVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred EeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccccCCCCCchHHhhCCCC
Confidence 6654 45555 533 3555555555 56899999999999999999999994 2333332211 111
Q ss_pred ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH
Q 002263 235 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 313 (946)
Q Consensus 235 ~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~ 313 (946)
..-+|+++|. |+|+. +| |++..++++.+.+... ..+ +.. . +. +++..
T Consensus 228 ~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~---------~~~-~~~-----------~-~~---~~~~~ 275 (385)
T PRK05958 228 EPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINR---------ARP-FIF-----------T-TA---LPPAQ 275 (385)
T ss_pred CCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHh---------Ccc-cee-----------c-CC---CCHHH
Confidence 2234777776 88753 22 6777777665543100 000 100 0 00 11112
Q ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee
Q 002263 314 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 314 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~ 390 (946)
..+..+++ .++.. . +++.+++.++.+++.+.|+++| +++... ...-+.+.+++ +.++.++|.++||.+...
T Consensus 276 ~aa~~aal--~~~~~-~-~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 276 AAAARAAL--RILRR-E-PERRERLAALIARLRAGLRALG-FQLMDS-QSAIQPLIVGDNERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHHHH--HHHhc-C-HHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCceEecc
Confidence 22233333 33322 1 5677888999999999999887 776532 22234555543 568999999999998642
Q ss_pred -----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -----D--SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -----~--~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. .+.+|+|++.+++++|++++++.|..
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 1 25799999999999999999999863
No 256
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.65 E-value=1e-14 Score=173.63 Aligned_cols=298 Identities=16% Similarity=0.144 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.+.+.|+..++++|.+.+.+.+|++|+|+.++++++. +++++||+++..|-+...++.+.|++.+.++...+
T Consensus 196 ~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn 267 (714)
T PRK15400 196 PHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSA--------PAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRN 267 (714)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 4789999999999999988889999989877776653 25789999999999999999999999999976432
Q ss_pred -----CCCC-----HHHHHHHHHhcCCCeE---EEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccC-
Q 002263 601 -----GNIN-----IEELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS- 666 (946)
Q Consensus 601 -----g~~D-----~e~L~~~i~~~~~~t~---~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~- 666 (946)
|.++ .+.++++|+++. +.+ ++++|+|++.|++- |+++|.++||.++ ++||.|+. +...|.+
T Consensus 268 ~~Gi~g~I~~~~~~~e~i~~~i~~~p-~ak~p~~~vit~pTYdG~~y-d~~~I~~~~~~~~--ilvDEAwg-ah~~F~p~ 342 (714)
T PRK15400 268 AYGILGGIPQSEFQHATIAKRVKETP-NATWPVHAVITNSTYDGLLY-NTDFIKKTLDVKS--IHFDSAWV-PYTNFSPI 342 (714)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCc-cccCccEEEEECCCCccEec-CHHHHHHHhCCCC--EEEEccch-hhhccCcc
Confidence 3456 899999998764 333 79999999999998 8999999999988 68999874 2222221
Q ss_pred -----CCccCC---C--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCC-CCcccCcc
Q 002263 667 -----PGYIGA---D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL-GTIAAAPW 735 (946)
Q Consensus 667 -----pg~~Ga---D--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~-~~i~~~~~ 735 (946)
+-..|+ | +++.|.||+++.- ...+.|-++. .+.-..+ ..+. ...+|||
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~al-----TQaS~LHvkg----~vd~~~~-----------n~a~~m~~STSP- 401 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAF-----SQASMIHVKG----DVNEETF-----------NEAYMMHTTTSP- 401 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccch-----hHHhHHHHcC----CCCHHHH-----------HHHHHHHcCCCc-
Confidence 112466 5 9999999998521 1122332211 1110000 0000 0112222
Q ss_pred chhhHHHHHHHHHHHHc-HhhHHHHHHHHHHHHHHHHHHHhcc--------CCeeec------------------cCC--
Q 002263 736 GSALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKRLEKH--------YPILFR------------------GVN-- 786 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG-~eGl~~~~~~~~~~a~~l~~~L~~~--------~~v~~~------------------~~~-- 786 (946)
+..+++..=...++|- +.| ++..+..+..+..++++|.++ +.+.-+ |-.
T Consensus 402 -sY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~ 479 (714)
T PRK15400 402 -HYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNI 479 (714)
T ss_pred -HHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccc
Confidence 3333332212222332 234 345566777788888888654 112100 000
Q ss_pred -------CceeeeEEEecccccc-----cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 787 -------GTVAHEFIVDLRGLKN-----TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 787 -------~~~~~e~v~~~~~~~~-----~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
+|. .+++.++.+.. +.|+++..+++.|.++||.+...+ ...+.+.++...|++++++++++|.
T Consensus 480 ~~~~~~lDP~--Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---~~~iLfl~s~g~t~~~~~~L~~aL~ 554 (714)
T PRK15400 480 DNEHMYLDPI--KVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---PYNLLFLFSIGIDKTKALSLLRALT 554 (714)
T ss_pred cccccccCCc--eEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 111 12333332211 147788999999999999876443 4678888899999999999999999
Q ss_pred HHHHH
Q 002263 855 SIREE 859 (946)
Q Consensus 855 ~i~~e 859 (946)
++.+.
T Consensus 555 ~f~~~ 559 (714)
T PRK15400 555 DFKRA 559 (714)
T ss_pred HHHHh
Confidence 87443
No 257
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.65 E-value=2.1e-14 Score=164.79 Aligned_cols=213 Identities=23% Similarity=0.230 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
+.++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||+++..|+++...+...++..|++++++|.+
T Consensus 63 ~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 137 (390)
T PRK08133 63 VTMFQERLAALEGAEA--CVATASGMAAILAVVMAL-LQ--AGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLD 137 (390)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHH
Confidence 5568899999999875 778899998887776665 23 799999999999998887766566789999999874
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +.++.+....|.++|+|++++|. |+++++ |
T Consensus 138 ~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD-~t~~~~~~~~pl~~g~Divv~S~sK~~~g~---g 213 (390)
T PRK08133 138 AWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVD-NCFCTPALQQPLKLGADVVIHSATKYLDGQ---G 213 (390)
T ss_pred HHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEeecceeecCC---c
Confidence 4555 7889999999998 67999999999999999999999994 34445555566788999999998 777532 1
Q ss_pred CCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 255 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 255 GP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
-.-+|++..+++.++++-. .++..|. +.+.+. + |+...|.+-+...
T Consensus 214 ~~~GG~vv~~~~~~~~~~~-------------------------~~~~~g~----~~~~~~---a--~~~l~gl~tl~~R 259 (390)
T PRK08133 214 RVLGGAVVGSKELMEEVFG-------------------------FLRTAGP----TLSPFN---A--WVFLKGLETLSLR 259 (390)
T ss_pred ceEeEEEEcCHHHHHHHHH-------------------------HHHHhCC----CCCHHH---H--HHHHcccchHHHH
Confidence 1123677776655433200 0011110 011111 1 1233444556667
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
.++..+++.++++.|++..+++
T Consensus 260 ~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 260 MEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7777889999999999884354
No 258
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.65 E-value=1.6e-14 Score=165.94 Aligned_cols=277 Identities=16% Similarity=0.182 Sum_probs=180.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
..+|..+...++++.+++++|.+. ..++.+|+.+..+++.++ +. +||.|+++...|+++...++. .|++++
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~--~i~~~sG~~a~~~a~~~~-~~--~gd~vi~~~~~~~~~~~~~~~----~g~~~~ 142 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEA--ALVFQSGFNTNQGVLSAL-LR--KGDIVLSDELNHASIIDGLRL----TKATKK 142 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-CC--CCCEEEEEccccHHHHHHHHh----cCCceE
Confidence 456777888889999999999753 445566666666554443 23 889999999999998877642 355544
Q ss_pred E---eccccccc-cC----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC---------CCC
Q 002263 173 V---SDLKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---------PGE 234 (946)
Q Consensus 173 ~---~~~~~l~~-i~----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~---------~~~ 234 (946)
. +|++++++ +. +++++|++.++ |.+|.+.|+++|.++||++|+++++|. ..+.+.+.. .-.
T Consensus 143 ~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 143 IYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDD-AHGSGVMGEAGRGTVHHFGLE 221 (385)
T ss_pred EeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEEC-cccccCcCCCCCccHhhcCCC
Confidence 4 44555654 32 36788877665 779999999999999999999999942 333332211 112
Q ss_pred ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH
Q 002263 235 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 313 (946)
Q Consensus 235 ~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~ 313 (946)
.+.||+++|. |.|+. ++ |++..++++.+.+... ..+ |. -+|. ..+..
T Consensus 222 ~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~---------~~~-~~-------------~~~~--~~~~~ 269 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNR---------ARP-FL-------------FSTA--QPPAV 269 (385)
T ss_pred cCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHh---------Ccc-cc-------------ccCC--CCHHH
Confidence 5688988887 88853 22 6888777776654100 000 10 0110 01122
Q ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee
Q 002263 314 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 314 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~ 390 (946)
..+..+++ ..+... .++.++..++.+++++.|+++| +++.... .+.+.+..+. ..++.+.|.++||.++..
T Consensus 270 ~~a~~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~ 343 (385)
T TIGR01825 270 VAALAAAV--DELQRS--PELMERLWDNTRFFKAGLGKLG-YDTGGSE-TPITPVVIGDEKAAQEFSRRLFDEGIFAQSI 343 (385)
T ss_pred HHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEECCHHHHHHHHHHHHHCCcEEccc
Confidence 33444443 222111 2456677788999999999887 7766321 1223333332 568999999999987531
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
....+|++++.+++++|+++++++|+.
T Consensus 344 ~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 344 VFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 126799999999999999999999963
No 259
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.65 E-value=1.6e-14 Score=172.04 Aligned_cols=272 Identities=14% Similarity=0.106 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 176 (946)
..+.++|+.+|+++|++.+.. +++|+|+++.+++++.. . +||+||+++++|.|+...+. ..|++.+++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~~aLi----lsga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYI-VTNGTSTSNKIVGMYAA-P--AGSTLLIDRNCHKSLAHLLM----MSDVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCChHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHH----HcCCeeEEecccc
Confidence 578899999999999987544 77888988888888763 3 89999999999999988753 25888888653
Q ss_pred ----------------ccccc-c--CCCE---eEEEEEcCCCceeecchHHHHHHHHhCCcEE-EEE----ecCccccCC
Q 002263 177 ----------------KDIDY-K--SGDV---CGVLVQYPGTEGEVLDYGDFIKNAHANGVKV-VMA----TDLLALTIL 229 (946)
Q Consensus 177 ----------------~~l~~-i--~~~t---~~v~v~~pn~~G~i~di~~i~~~a~~~gal~-~v~----a~~~al~~l 229 (946)
+.+++ + .++. +++++|+|||.|.+.|+++|++++ |+.+ +|+ ++..-....
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 22333 3 2333 689999999999999999999999 6666 573 221111112
Q ss_pred CCCCC--c--cceEE---Eecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccc
Q 002263 230 KPPGE--L--GADIV---VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 301 (946)
Q Consensus 230 ~~~~~--~--GaDi~---v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr 301 (946)
++... . |+|.+ +.|. |.+++- + ++++++++.. + |. + |.
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~al-T----QaS~iHvk~~----v---------d~--~--------------~~ 389 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAAF-S----QASLIHIKGE----Y---------DE--E--------------TF 389 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhcccccc-c----hheeeeecCC----C---------CH--H--------------HH
Confidence 21111 2 58888 8888 555432 2 4678887542 1 10 0 01
Q ss_pred cccCCCccchHHHHHHHHHHH--HHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCC------EEEcCC------------
Q 002263 302 DKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGL------------ 360 (946)
Q Consensus 302 e~aTsni~t~~~l~a~~aa~y--~~~~g-~~Gl~~i~~~~~~~a~~l~~~L~~~g~------~~~~~~------------ 360 (946)
..+-.-..|++++|.++||+- ..++. +.| +++.++..+.+..+++.|.++++ ++++++
T Consensus 390 n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~ 468 (713)
T PRK15399 390 NEAFMMHTSTSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVA 468 (713)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecC
Confidence 111122335578899999982 23333 345 56778888889999999988754 455421
Q ss_pred ---C------------CcCe--EEEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHH
Q 002263 361 ---P------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDK 410 (946)
Q Consensus 361 ---~------------~~~~--~~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ 410 (946)
. ..|. ++|.++ + +..+.+.|+++||.++..+...+.+.++..+|++++++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~ 548 (713)
T PRK15399 469 PGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMG 548 (713)
T ss_pred CCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHH
Confidence 0 1243 455443 3 67899999999999999888999999999999999999
Q ss_pred HHHHHh
Q 002263 411 LFIVFA 416 (946)
Q Consensus 411 ll~~l~ 416 (946)
|+++|.
T Consensus 549 L~~aL~ 554 (713)
T PRK15399 549 LLRGLT 554 (713)
T ss_pred HHHHHH
Confidence 999996
No 260
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.65 E-value=1.5e-14 Score=165.27 Aligned_cols=285 Identities=16% Similarity=0.172 Sum_probs=182.3
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++++|.+...+..++|++.. ...+++.+. .++++|++++..|..+...+...|.+++.++. .++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~--l~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~ 141 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEI--LELLARAYL-----GPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYG 141 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHH--HHHHHHHhc-----CCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCC
Confidence 468888999999876555566665532 222233321 24678999988766666667889999999998 4567
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc--CCEEEEecccccccc-cccCCC----ccCCC-
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQV-GLTSPG----YIGAD- 673 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~-gl~~pg----~~GaD- 673 (946)
+|+++++++++ +++++|++++|+ .+|.+. +.++|.++++.+ |+++++|+++....- +...++ +...+
T Consensus 142 ~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 142 HDLDAMLAAVT---PRTRLVFIANPNNPTGTYL-PAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred CCHHHHHHHhC---CCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence 89999999996 688899999994 799998 688999988875 899999998532110 100010 11223
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+++.++.|+|+ ..|.++|++++++++.+.+... . ...+++ .....++..++.. .
T Consensus 218 i~~~S~SK~~g----~~G~RiG~l~~~~~~~~~l~~~------------~--~~~~~~------~~~~~~a~~~l~~--~ 271 (367)
T PRK02731 218 VVTRTFSKAYG----LAGLRVGYGIAPPEIIDALNRV------------R--QPFNVN------SLALAAAVAALDD--D 271 (367)
T ss_pred EEEeeehHhhc----CcccceeeeeCCHHHHHHHHHc------------c--CCCCCC------HHHHHHHHHHhCC--H
Confidence 44556778774 3467889999987765543210 0 001111 1111222333321 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC-CCCCCC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVPG 831 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~-~~p~~~ 831 (946)
+.+++..+....+.+++.+.|++. +.+. + +.+.+ +.++++ .+.+..+++++|.++||.+... .|..++
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~~g~~---~~i~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 272 AFVEKSRALNAEGMAWLTEFLAELGLEYI-P-SVGNF---ILVDFD-----DGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccC-C-CCceE---EEEECC-----CCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 224445555556677788888775 3321 1 12322 455553 2357889999999999987532 232357
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
++|+++. +.+|+++|+++|+++++
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHHHHh
Confidence 8999984 68999999999998754
No 261
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.65 E-value=1.9e-14 Score=165.62 Aligned_cols=274 Identities=16% Similarity=0.152 Sum_probs=183.7
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---c
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~ 178 (946)
.++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||++...|+++...+...++..|++++++|.. +
T Consensus 67 ~~Le~~iA~~~g~~~--~l~~~sG~~Ai~~al~~l-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 141 (400)
T PRK06234 67 TEVENKLALLEGGEA--AVVAASGMGAISSSLWSA-LK--AGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE 141 (400)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence 357789999999763 778899998887766654 23 899999999999998887766667789999998864 4
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhC--CcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~--gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++ |++++++ +..+.+....+.++|+||+++|. |.|+++
T Consensus 142 l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD-ea~~~~~~~~~l~~g~Divv~S~sK~l~g~--- 217 (400)
T PRK06234 142 VRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD-NTFCTPYIQRPLQLGADVVVHSATKYLNGH--- 217 (400)
T ss_pred HHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE-CCCCchhcCCchhhCCcEEEeeccccccCC---
Confidence 555 7788999999998 6799999999999999997 8999994 34455544566678999999998 877532
Q ss_pred CCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 254 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 254 GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
|...+|++++++++.+++.. .+ .+..-+. +.+++ .+. +...|-+-+..
T Consensus 218 g~~~gG~v~~~~~~~~~l~~--~~----------------------~~~~~g~---~l~p~---~a~--l~~~~l~tl~~ 265 (400)
T PRK06234 218 GDVIAGFVVGKEEFINQVKL--FG----------------------IKDMTGS---VIGPF---EAF--LIIRGMKTLQI 265 (400)
T ss_pred CCceeEEEEecHHHHHHHHH--HH----------------------HHHhcCC---CCCHH---HHH--HHHhccCcHHH
Confidence 22236899998877665410 00 0000000 00121 111 23334444556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC----HHHHHHHHHHcCCeee----
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEMNLR---- 388 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~~GI~~~---- 388 (946)
..++..+++.++++.|++...+. +..+ + ...-|+|.+++ +.++.++|.-.++-.+
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~ 345 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDA 345 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCC
Confidence 66777889999999999864342 2211 1 11246777653 4456666654333210
Q ss_pred --e---------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 --V---------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 --~---------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. +.++.||+|++.-+.++=|++|.++|.
T Consensus 346 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 396 (400)
T PRK06234 346 ETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALD 396 (400)
T ss_pred CceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 0 124679999998766665677777664
No 262
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.65 E-value=3.5e-14 Score=160.59 Aligned_cols=269 Identities=15% Similarity=0.191 Sum_probs=180.7
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcC-------C---
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------M--- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G-------~--- 590 (946)
..++.+.+++++|.+.+ ++.++|+.++++++.++|.|. +|++|+ ...+.||....+....| +
T Consensus 68 ~~~la~~l~~~~~~~~v-~~~~SGseA~e~Alklar~~~------gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~ 140 (364)
T PRK04013 68 KEEMLEELSKWVNYEYV-YMGNSGTEAVEAALKFARLYT------GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPL 140 (364)
T ss_pred HHHHHHHHHhhcCCCEE-EEeCchHHHHHHHHHHHHHHh------CCCEEEEECCccccCchhhccCCCCcccccCCCCC
Confidence 45778889999887754 567899999988888888762 345666 56788998866654322 1
Q ss_pred --EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCCEEEEecccccccccc
Q 002263 591 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGL 664 (946)
Q Consensus 591 --~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~gl 664 (946)
.+..+|. .|++++++.+. +++++|++..-. ..|++.++ +++|.++|++||++++.|+++ .|+
T Consensus 141 ~~~~~~~~~-----~d~~~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~----tG~ 208 (364)
T PRK04013 141 VPGFKHIPF-----NDVEAAKEAIT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQ----SGL 208 (364)
T ss_pred CCCcEEecC-----CCHHHHHHHhc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hcC
Confidence 1233333 27889999886 789999887643 45666555 999999999999999999864 466
Q ss_pred cCCCcc--------CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 665 TSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 665 ~~pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
+.|.+ -+|++++ .|.++ +|-| +|.+..++++.+ +. ..+ .+.|
T Consensus 209 -RtG~~~a~~~~gv~PDiv~~--gK~lg----gG~P-~~a~~~~~~~~~---~~------------------~~~-T~~g 258 (364)
T PRK04013 209 -RTGKFLAIEHYKVEPDIVTM--GKGIG----NGVP-VSLTLTNFDVER---GK------------------HGS-TFGG 258 (364)
T ss_pred -CCCchhHHHhcCCCCCEEEe--ccccc----CCce-eEEEEecccccC---CC------------------cCC-CCCc
Confidence 66653 2688887 48774 3434 555666655421 10 001 1345
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
+.+.++++.+.|..+-++++.+.++.. + .+|..-+-....|. | .+ +-+.+. .....+.+.+.
T Consensus 259 np~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~~~v~~vRG~-G-l~--~gve~~-------~~~~~i~~~~~ 320 (364)
T PRK04013 259 NPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKGERVVTTRGR-G-LM--IGIVLK-------KPVGKYVEELQ 320 (364)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhccCcceeeeeC-c-EE--EEEEeC-------CcHHHHHHHHH
Confidence 677788889999999888877655432 2 22322110012231 2 22 123332 12567889999
Q ss_pred HCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 817 ~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++|+.+.... .+++|+.|+...|++|+|++++.|+++++++
T Consensus 321 ~~Gll~~~~g---~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 321 NRGYLVHTAG---QRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred hCCcEEeeCC---CCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 9999875332 3789999999999999999999999998764
No 263
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=7.6e-14 Score=162.33 Aligned_cols=333 Identities=20% Similarity=0.204 Sum_probs=205.2
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..+|++.+.+..++..+.... .+.. ..+. ..+...++.+.|+++++.. ...++.++|+.++++++..+|.
T Consensus 53 ~~lGh~~p~v~~Ai~~ql~~~-~~~~-~~~~-------~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~ 123 (443)
T PRK08360 53 QNVGHNNPRVVKAIKEQTDKL-IHYT-PIYG-------FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARA 123 (443)
T ss_pred cccCCCCHHHHHHHHHHHHhc-cCcc-cccc-------CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHH
Confidence 457888777766666653221 1111 0110 1123457888899988643 2346788999999988888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCCCC------------CCHHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGN------------INIEELRKAAE 613 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~g~------------~D~e~L~~~i~ 613 (946)
|. +|.+|+ ...+.||.+..+....|. .+..+|...... .+++.++++++
T Consensus 124 ~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (443)
T PRK08360 124 YT------KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFE 197 (443)
T ss_pred hc------CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHH
Confidence 62 355666 456899988776554442 234444322100 23556777776
Q ss_pred h--cCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc--------cCCCEEEeCC
Q 002263 614 A--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNL 679 (946)
Q Consensus 614 ~--~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~ 679 (946)
+ +.+++++|+++.- +..|++.+ .+++|.++|++||+++++|.++. ++.+.|. .-.|++++
T Consensus 198 ~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~----g~gr~G~~~a~~~~~~~pDiitl-- 271 (443)
T PRK08360 198 GEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS----GLGRTGKWFAIEHFGVEPDIITL-- 271 (443)
T ss_pred hccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCccchhhhhcCCCCCEEEe--
Confidence 4 2467999988732 56787653 39999999999999999999753 3333332 23688766
Q ss_pred CcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHH
Q 002263 680 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 759 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~ 759 (946)
.|+++ +|..+|++++++++.+.+.... .....+ ++...++++.+.|..+..+++.+
T Consensus 272 sK~l~-----~G~pigav~~~~~i~~~~~~~~--------------~~~T~~----~~p~~~aaa~a~l~~l~~~~l~~- 327 (443)
T PRK08360 272 GKPLG-----GGLPISATIGRAEIMDSLPPLA--------------HAFTLS----GNPVASAAALAVIEEIEEKNLLK- 327 (443)
T ss_pred ccccc-----CCceeEEEEEcHHHHhhhcCCC--------------CCCCCC----cCHHHHHHHHHHHHHHHHcCHHH-
Confidence 58874 4456888988877766553110 011112 34555666778888876665543
Q ss_pred HHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccc--cccC-CCCHHHHHHHHHHCCcccCCCCCCCCC
Q 002263 760 SKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL--KNTA-GIEPEDVAKRLMDYGFHGPTMSWPVPG 831 (946)
Q Consensus 760 ~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~--~~~~-g~~~~~i~~~L~~~Gi~~~~~~~p~~~ 831 (946)
+...+.++|.++|++. +.+. ..| .+.. +-+.+..- +... ...+..+.++|.++|+.+.... .+
T Consensus 328 --~~~~~g~~l~~~L~~l~~~~~~v~~vrg-~Gl~---~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~ 398 (443)
T PRK08360 328 --RAEKLGNYTKKRLEEMKKKHELIGDVRG-IGLM---IGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS---GN 398 (443)
T ss_pred --HHHHHHHHHHHHHHHHHHhCCCeeeeec-cceE---EEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC---CC
Confidence 4446677888888654 3322 122 1222 12222110 0000 0124578889999999875332 47
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 002263 832 TLMIEPTESESKEELDRYCDALISIREEIAQIENGKAD 869 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~ 869 (946)
.+|++|+..+|++|||++++++.+++++++ .|..|
T Consensus 399 ~lr~~P~l~~t~~~id~~~~~l~~~l~~~~---~~~~~ 433 (443)
T PRK08360 399 VLRIQPPLTIEKEVLDEGLDILEEAIEDVE---EGKVP 433 (443)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHH---hccCC
Confidence 899999999999999999999999987753 35553
No 264
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.65 E-value=3e-14 Score=165.57 Aligned_cols=273 Identities=15% Similarity=0.153 Sum_probs=173.6
Q ss_pred HHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEecc------
Q 002263 104 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSDL------ 176 (946)
Q Consensus 104 ~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~-~a~~~gi~v~~~~~------ 176 (946)
++..+++++|.+.+++ ++.+||.+.++++.++ .. +||+|+++..+|+++...+.. .....|++++.++.
T Consensus 76 ~~~~la~~~g~~~~~i-~~~sgt~al~~~l~~l-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 151 (416)
T PRK00011 76 AIDRAKELFGAEYANV-QPHSGSQANAAVYFAL-LK--PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGL 151 (416)
T ss_pred HHHHHHHHhCCCceee-ecCCchHHHHHHHHHh-cC--CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCC
Confidence 4668999999987655 3446777777666555 33 899999999999865433211 11234666666543
Q ss_pred ---ccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEE-ecCcccc---CCCCCCCccceEEEecc-cc
Q 002263 177 ---KDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLALT---ILKPPGELGADIVVGSA-QR 246 (946)
Q Consensus 177 ---~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~-a~~~al~---~l~~~~~~GaDi~v~s~-k~ 246 (946)
+++++ +. .++++|+++.+ .+|...|+++|+++||++|++++++ ++..++. ....+-. ++|++++|+ |+
T Consensus 152 ~d~~~l~~~i~~~~~k~v~~~~~-~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~ 229 (416)
T PRK00011 152 IDYDEVEKLALEHKPKLIIAGAS-AYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKT 229 (416)
T ss_pred cCHHHHHHHHHhcCCCEEEECCC-cCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcC
Confidence 34555 54 37888887654 4677789999999999999999994 3322221 1122233 789999998 65
Q ss_pred ccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH
Q 002263 247 FGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 325 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~ 325 (946)
|+ ||.+|++.++ +++.+++.... .+ + . .+|+.. ....++.++. ..
T Consensus 230 l~------g~~gg~i~~~~~~~~~~l~~~~---------~~-~----------~---~~~~~~---~~~aa~~~a~--~~ 275 (416)
T PRK00011 230 LR------GPRGGLILTNDEELAKKINSAV---------FP-G----------I---QGGPLM---HVIAAKAVAF--KE 275 (416)
T ss_pred CC------CCCceEEEeCCHHHHHHHHHHh---------Cc-c----------c---cCCccH---HHHHHHHHHH--HH
Confidence 63 4555777775 56665541000 00 0 0 011111 1222222222 22
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcCeEEEecC----CHHHHHHHHHHcCCeeee----e------
Q 002263 326 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA----DAHAIASAAYKIEMNLRV----V------ 390 (946)
Q Consensus 326 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~----~~~~v~~~L~~~GI~~~~----~------ 390 (946)
+..++++++.++..++++++++.|+++| +++.. ....+.+.+.++ ...++.+.|.++||.++. +
T Consensus 276 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~ 354 (416)
T PRK00011 276 ALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPF 354 (416)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCC
Confidence 3345788899999999999999999988 88763 122233445543 257889999999998862 1
Q ss_pred cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 002263 391 DSNTVTASFDE----TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ~~~~lris~~~----~~t~edid~ll~~l~~ 417 (946)
.+..+|++.+. ..|++|+++++++|..
T Consensus 355 ~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~ 385 (416)
T PRK00011 355 VTSGIRIGTPAITTRGFKEAEMKEIAELIAD 385 (416)
T ss_pred CCCceEecCHHHhhcCcCHHHHHHHHHHHHH
Confidence 13568987644 4569999999999963
No 265
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.64 E-value=4.5e-14 Score=163.86 Aligned_cols=376 Identities=15% Similarity=0.120 Sum_probs=218.8
Q ss_pred CCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccc----cCCCCcccccccHHHHHHHHHHHHHH
Q 002263 456 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN----IHPFAPADQAQGYQEMFNNLGEWLCT 531 (946)
Q Consensus 456 ~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~----~~p~~p~e~~qG~~~~~~el~~~la~ 531 (946)
+.|.++.|.+-.|.+....++++..+|+-|..+++.....+.. +++.. ...+ ....| ....++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~--~~~~a~~~~~~~~---~~~~G--~~~~~fe~~lA~ 74 (438)
T PRK15407 2 MTEEELRQQILELVREYAELAHAPKPFVPGKSPIPPSGKVIDA--KELQNLVDASLDF---WLTTG--RFNDAFEKKLAE 74 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCcCccCCCH--HHHHHHHHHHHhC---cccCC--hhHHHHHHHHHH
Confidence 5678888888777776656666666676666555433222210 11100 0000 01123 235688999999
Q ss_pred hhCCCcccccCCchHHHHHHHHHHHHH-HHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-CCCCCHHHHH
Q 002263 532 ITGFDSFSLQPNAGAAGEYAGLMVIRA-YHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELR 609 (946)
Q Consensus 532 l~G~~~~~l~~~sGa~ge~a~l~a~r~-y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~g~~D~e~L~ 609 (946)
++|.+.+ +.+++|+++...++.++.. +....+.+++++||++...|..+...+...|++++.++++. ++.+|+++++
T Consensus 75 ~~g~~~~-v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le 153 (438)
T PRK15407 75 FLGVRYA-LLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLE 153 (438)
T ss_pred HhCCCeE-EEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHH
Confidence 9998754 5667787766554444321 00011334678999999988777777888999999999874 5789999999
Q ss_pred HHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccCCCEEEeCCCcccccCCC
Q 002263 610 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNLHKTFCIPHG 688 (946)
Q Consensus 610 ~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~GaDi~~~s~hK~f~~P~g 688 (946)
++++ ++|++|+++++ +|... ++++|.++|+++|++|++|+++..+..-- ...|.+| |+.++|+|..-.++
T Consensus 154 ~~i~---~~tkaVi~~~~--~G~p~-dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~-- 224 (438)
T PRK15407 154 AAVS---PKTKAIMIAHT--LGNPF-DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHIT-- 224 (438)
T ss_pred HHcC---cCCeEEEEeCC--CCChh-hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCcc--
Confidence 9996 78999999875 56665 79999999999999999999875332111 1346666 99999987653322
Q ss_pred CCCCcceeEEEec-ccCCCCCC-CccccCC------C--------C--C--CCCCCC--CCCCcccCccchhhHHHHHHH
Q 002263 689 GGGPGMGPIGVKK-HLAPFLPS-HPVVSTG------G--------I--P--APEKSQ--PLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 689 ~GGPg~G~i~~~~-~l~~~lp~-~~v~~~~------d--------~--~--~~~~~~--~~~~i~~~~~g~~~~~~~a~a 746 (946)
. |.| |++++++ .+...+.. +..|... + + + .++... ....+..+..-+-..++.+..
T Consensus 225 ~-geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~ 302 (438)
T PRK15407 225 M-GEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLA 302 (438)
T ss_pred c-cCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHH
Confidence 2 344 7888875 33322210 0011100 0 0 0 000000 000000000001222333333
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCC-eeecc-CC--CceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYP-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~-v~~~~-~~--~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
-|.. +.+..++...++.++.+.|++... +..+. +. .+..|.+.+.+.. ..+.+.+++.+.|.++||..
T Consensus 303 qL~~-----l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~Rd~l~~~L~~~GI~~ 374 (438)
T PRK15407 303 QLEK-----LPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKE---DAGFTRVELVKYLEENKIGT 374 (438)
T ss_pred HHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECC---cCCCCHHHHHHHHHHCCCCc
Confidence 3333 344455556778888888876421 21111 11 2334455555431 12456789999999999964
Q ss_pred CCCC--------------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 823 PTMS--------------------WPV-----PGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 823 ~~~~--------------------~p~-----~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
...+ +|. ...|.+-+....|++|+++.+++++++++
T Consensus 375 ~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 375 RLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred cccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 3111 110 12344444445689999999999998764
No 266
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=1.2e-13 Score=160.87 Aligned_cols=290 Identities=19% Similarity=0.207 Sum_probs=181.7
Q ss_pred HHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC--------
Q 002263 522 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------- 590 (946)
..++.+.|+++++-+ ...++.++|+.++++++..+|.|. +|++|+ ...++||....+....|.
T Consensus 99 ~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~t------gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 99 AVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHT------GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHh------CCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 457888888887521 234678899999998888888762 345666 567899998776554331
Q ss_pred -----EEEEEcCCCCCC-------------CCHHHHHH-HHHh--cCCCeEEEEEeCC-CcccccccC----HHHHHHHH
Q 002263 591 -----KIVSVGTDAKGN-------------INIEELRK-AAEA--NRDNLSTLMVTYP-STHGVYEEG----IDEICKII 644 (946)
Q Consensus 591 -----~vv~v~~~~~g~-------------~D~e~L~~-~i~~--~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia 644 (946)
.+..++...... -+++.+++ .+++ +.+++++|++..- +..|++. + +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~-~~~~~l~~l~~l~ 251 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVV-PPKNFFKELRKLA 251 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcC-CCHHHHHHHHHHH
Confidence 234444421100 12344666 3332 2467888877643 3457765 4 99999999
Q ss_pred HHcCCEEEEecccccccccccCCCc------cC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 645 HDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 645 ~~~g~ll~vD~a~~~a~~gl~~pg~------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
++||+++++|.++ .|+.+.|. +| +|++++ .|.++ ||-.+|.+++++++...+++..
T Consensus 252 ~~~g~lli~DEv~----tG~gr~G~~~a~~~~gv~pDivt~--~K~l~-----~G~p~gav~~~~~i~~~~~~~~----- 315 (441)
T PRK05769 252 DKYGILLIDDEVQ----TGMGRTGKMFAIEHFGVEPDIITL--AKAIA-----GGLPLGAVIGRAELMFLPPGSH----- 315 (441)
T ss_pred HHcCCEEEEechh----hCCCcccceehhhccCCCCCEEEE--ccccc-----CCcccEEEEEehhhhhcCCCCC-----
Confidence 9999999999875 34444442 23 588875 47763 3455778888887765433110
Q ss_pred CCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceee
Q 002263 717 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAH 791 (946)
Q Consensus 717 d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~ 791 (946)
.+. +.|+.+.++++.+.|..+.+ ++. ++...+.++|++.|++. +.+. ..|. |..
T Consensus 316 ----------~~T----~~g~p~~~aaa~a~L~~l~~-~~~---~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~-- 374 (441)
T PRK05769 316 ----------ANT----FGGNPVAAAAALATLEELEE-GLL---ENAQKLGEYLRKELKELKEKYEFIGDVRGL-GLM-- 374 (441)
T ss_pred ----------CCC----CCcCHHHHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHhCCCeeeeecc-eEE--
Confidence 011 22455566777788888755 443 44456778888888764 3322 1221 222
Q ss_pred eEEEecccc-cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 792 EFIVDLRGL-KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 792 e~v~~~~~~-~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+.+..- +.........+.+.|.++|+.+.... .+.+|++|+..+|++|||++++++.+++.+
T Consensus 375 -~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~---~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 375 -IGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG---KSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred -EEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12222110 00000123568888899999874322 368999999999999999999999998765
No 267
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.64 E-value=2.3e-14 Score=163.99 Aligned_cols=213 Identities=24% Similarity=0.266 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.++++.|.+. +.++++|++++.++++++. . +||+||++...|+.+...+...++..|++++++|.+
T Consensus 56 ~~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al~-~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~ 130 (380)
T TIGR01325 56 VAAFEERIAALEGAER--AVATATGMSAIQAALMTLL-Q--AGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLN 130 (380)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh-C--CCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHH
Confidence 4567789999999864 6788999999888877652 3 789999999999888877776667789999999875
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ +++++++|++++| |.+|.+.|+++|+++||++|++++|| +..+.+....|.++|+|+++.|. |.++++ |
T Consensus 131 ~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD-~a~~~~~~~~pl~~g~Divv~S~sK~l~g~---g 206 (380)
T TIGR01325 131 AWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVD-NVFATPVLQQPLKLGADVVVYSATKHIDGQ---G 206 (380)
T ss_pred HHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeeccceecCC---C
Confidence 4455 6788999999998 67999999999999999999999994 34444444456688999999998 777532 1
Q ss_pred CCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 255 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 255 GP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
-.-+|++..++++.+.+.. .++..|+. + ++..+ ++...+.+-++..
T Consensus 207 ~~~gG~vv~~~~~~~~l~~-------------------------~~~~~g~~-~---~p~~a-----~~~l~~l~tl~~r 252 (380)
T TIGR01325 207 RVMGGVIAGSEELMAEVAV-------------------------YLRHTGPA-M---SPFNA-----WVLLKGLETLSLR 252 (380)
T ss_pred CeEEEEEEeCHHHHHHHHH-------------------------HHHhhCCC-C---CHHHH-----HHHHhccCcHHHH
Confidence 1124777777766554310 00111111 1 12211 1234455566666
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
.++..+++.++.+.|++.++++
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 7778889999999999875454
No 268
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.64 E-value=8.6e-15 Score=174.27 Aligned_cols=273 Identities=13% Similarity=0.093 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 176 (946)
..+.++|+.+|+++|++.+.. +++|+|+++-+++++.. . +||+||+++++|.|+...+. ..|++.+++.+
T Consensus 195 G~i~eAe~~AA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~haLi----lsga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYM-VTNGTSTANKIVGMYSA-P--AGSTVLIDRNCHKSLTHLMM----MSDVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCchHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHH----HcCCeEEEecccc
Confidence 578899999999999997644 77888888888888763 3 89999999999999988753 25888888643
Q ss_pred ----------------ccccc-c--CCCEe---EEEEEcCCCceeecchHHHHHHHHhCCcEEEEE----ecCccccCCC
Q 002263 177 ----------------KDIDY-K--SGDVC---GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 230 (946)
Q Consensus 177 ----------------~~l~~-i--~~~t~---~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~----a~~~al~~l~ 230 (946)
+.+++ + .++.+ .+++|+|||+|.+.|+++|++++|.++ ++|+ ++..-...++
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccC
Confidence 22333 3 23444 799999999999999999999999988 4663 2221112122
Q ss_pred --CCCCccc---e--EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccccc
Q 002263 231 --PPGELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD 302 (946)
Q Consensus 231 --~~~~~Ga---D--i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre 302 (946)
.+-..|+ | +++.|. |.+++- + ++++++++.. + | +.|..
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~al-T----QaS~LHvkg~----v---------d----------------~~~~n 390 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAAF-S----QASMIHVKGD----V---------N----------------EETFN 390 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccch-h----HHhHHHHcCC----C---------C----------------HHHHH
Confidence 2233567 5 999999 555431 1 3455554321 1 1 00111
Q ss_pred ccCCCccchHHHHHHHHHHH--HHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCC------EEEcCCC------------
Q 002263 303 KATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGLP------------ 361 (946)
Q Consensus 303 ~aTsni~t~~~l~a~~aa~y--~~~~g-~~Gl~~i~~~~~~~a~~l~~~L~~~g~------~~~~~~~------------ 361 (946)
.+-.-..|++++|.++||+- ..++. +.| +++.++..+.+..+++.|.++.+ ++++.+.
T Consensus 391 ~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p 469 (714)
T PRK15400 391 EAYMMHTTTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS 469 (714)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCc
Confidence 11122345578899999882 23333 244 56778888889999999988765 5555211
Q ss_pred ---------------CcCe--EEEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHH
Q 002263 362 ---------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKL 411 (946)
Q Consensus 362 ---------------~~~~--~~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~l 411 (946)
..|. ++|.++ + +..+.+.|+++||.++..+...+.+.++..+|++++++|
T Consensus 470 ~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L 549 (714)
T PRK15400 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSL 549 (714)
T ss_pred cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHH
Confidence 1243 445442 2 678999999999999998889999999999999999999
Q ss_pred HHHHh
Q 002263 412 FIVFA 416 (946)
Q Consensus 412 l~~l~ 416 (946)
+++|.
T Consensus 550 ~~aL~ 554 (714)
T PRK15400 550 LRALT 554 (714)
T ss_pred HHHHH
Confidence 99997
No 269
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.64 E-value=8e-15 Score=158.07 Aligned_cols=293 Identities=18% Similarity=0.155 Sum_probs=182.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH--HHHcC-CEEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCG-MKIV 593 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~--a~~~G-~~vv 593 (946)
|.-+...++++.+++++|...+ ++..+|++++.. +++... . ++..||+...+|-..... .+.++ ...+
T Consensus 32 G~D~~~~~~e~~~ae~~g~~a~-~Fv~sGT~aN~l---al~~~~-~----~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~ 102 (342)
T COG2008 32 GEDPTTNALEQRIAELFGKEAA-LFVPSGTQANQL---ALAAHC-Q----PGESVICHETAHIYTDECGAPEFFGGGQKL 102 (342)
T ss_pred CCCHHHHHHHHHHHHHhCCceE-EEecCccHHHHH---HHHHhc-C----CCCeEEEeccccceecccCcHHHHcCCcee
Confidence 3345677899999999999444 556678777743 344322 2 446788888888655442 33333 3333
Q ss_pred EEcCCCCCCCCHHHHHHHHHh----cCCCeEEEEEeCCCcccccc--cCHHHHHHHHHHcCCEEEEecccc-cccccccC
Q 002263 594 SVGTDAKGNINIEELRKAAEA----NRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGLTS 666 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~----~~~~t~~vvvt~Pn~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~-~a~~gl~~ 666 (946)
.+.-.++|.++++++++.|.. |.+...++..+.++..|.+- +.|++|+++||++|+.||+|||-+ |++..+..
T Consensus 103 ~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~ 182 (342)
T COG2008 103 PIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGV 182 (342)
T ss_pred ccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCC
Confidence 333347899999999999863 22344555566667678875 258999999999999999999863 45544443
Q ss_pred CC---ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 667 PG---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 667 pg---~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
+. ..++|++.+.+.|.. |.|+-.+++.+..++..+..+ +...-+.++ ++..+++
T Consensus 183 ~~~~~~~~~D~v~~~~tK~g------~~~~gAiv~gn~~~~~~a~~~------------rK~~Ggl~~-----k~r~laA 239 (342)
T COG2008 183 ALKTIKSYVDSVSFCLTKGG------GAPVGAIVFGNRDFAKRARRW------------RKRAGGLMR-----KARFLAA 239 (342)
T ss_pred CHHHHHhhCCEEEEecccCC------cceeeeEEEcCHHHHHHHHHH------------HHHhcccHh-----hhhHHHH
Confidence 32 248999999988853 344555666666665543211 000111222 3334445
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
+|.+ ++..+-.+...++.-..|+.|+++|.+. +++..+ +..|.+.++++ +...+.|...||.
T Consensus 240 ~~~~--~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~----~~tN~vf~~l~----------~~~i~~l~~~~~~ 303 (342)
T COG2008 240 QGLY--ALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP----VETNMVFVRLP----------ESAIEALRLAGAL 303 (342)
T ss_pred HHHH--HHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC----CcccEEEEECC----------hHHHHHHHhhchh
Confidence 5554 3444435555555555588999998853 555442 24455666654 1222666666665
Q ss_pred cCC--CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 822 GPT--MSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 822 ~~~--~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
... +..+....+|+..+..+|+++||+|++.+++.+
T Consensus 304 ~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 304 FYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred heeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 432 111111379999999999999999999998753
No 270
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.64 E-value=5.8e-14 Score=162.79 Aligned_cols=299 Identities=16% Similarity=0.219 Sum_probs=190.8
Q ss_pred HHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE--------
Q 002263 522 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-------- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~-------- 591 (946)
..++.++++++++-+ ...++.++|+.++++++...|.|...+|..+|.+|| ...++||....+..+.|-.
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 446778888887543 234677889999888888888876555544455666 6788999876655443321
Q ss_pred -----EEEEcCCCC-C-----CCCHHHHHHHHHhcCCCeEEEEEeCC-C-cccccc---cCHHHHHHHHHHcCCEEEEec
Q 002263 592 -----IVSVGTDAK-G-----NINIEELRKAAEANRDNLSTLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDG 655 (946)
Q Consensus 592 -----vv~v~~~~~-g-----~~D~e~L~~~i~~~~~~t~~vvvt~P-n-~~G~~~---~~i~~I~~ia~~~g~ll~vD~ 655 (946)
+..++.... . .-|+++++++++++.+++++|++..- . ..|... .++++|.++|++||+++++|.
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DE 249 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADE 249 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 112222111 0 12578888899766677888888752 3 344432 369999999999999999999
Q ss_pred ccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCC
Q 002263 656 ANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL 727 (946)
Q Consensus 656 a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~ 727 (946)
++ .|+.+.|. ..+|++++ .|.|+ +|-..++.+++++++.+.+..... ...
T Consensus 250 v~----tG~Gr~G~~~~~~~~~v~pDi~~~--gK~l~----gG~~p~~a~~~~~~~~~~~~~~~~------------~~~ 307 (427)
T TIGR00508 250 IA----TGFGRTGKLFACEHAGVVPDILCV--GKALT----GGYMTLSATVTTDKVAQTISSGEA------------GCF 307 (427)
T ss_pred cc----cCCCcCCccchhhhcCCCCCEEEe--chhhh----cCcccceEEEEcHHHHHHHhcCCC------------Ccc
Confidence 85 33444442 24688875 58873 332456777777766554421100 000
Q ss_pred CCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEeccccccc
Q 002263 728 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNT 803 (946)
Q Consensus 728 ~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~ 803 (946)
...+++.|+...++++.+.|..+..+.+. ++...+.++|.++|++. .... ..|. +.. +.+.+..
T Consensus 308 -~~~~T~~g~p~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~L~~l~~~~~i~~vrg~-G~~---~~i~~~~---- 375 (427)
T TIGR00508 308 -MHGPTFMGNPLACAVAEASLAILLEGEWQ---KQVSAIENQLKRELSPLRKNPVVKDVRVL-GAI---GVVEMYK---- 375 (427)
T ss_pred -ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhhcCCCEEeEecc-ccE---EEEEECC----
Confidence 00111234566677778888887665543 44557788999988775 2211 1111 222 2222221
Q ss_pred CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 804 AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 804 ~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
......+.++|.++|+++... .+.+|++|+..+|++|||++++++.+++.|
T Consensus 376 -~~~~~~~~~~l~~~Gv~~~~~----~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 376 -PVNVEELQKKFVEQGVWIRPF----GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred -ccCHHHHHHHHHHCCeEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 134678999999999987532 367999999999999999999999998754
No 271
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=1.3e-14 Score=164.93 Aligned_cols=281 Identities=14% Similarity=0.115 Sum_probs=178.8
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~-~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++.+++.+|++..++..+.|++. ++.++++.+. . ++ ++|+++.+.+..+...++..|++++.+|+++++
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~--~i~~~~~~~~-~----~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADE--AIELLIRAFC-E----PGQDSIACFGPTYGMYAISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHH--HHHHHHHHhc-C----CCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCC
Confidence 36778889999998766666666642 2333444432 1 34 789998886665556688999999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc-CCEEEEecccccccccccCCCcc---CCC-EE
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTSPGYI---GAD-VC 675 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~-g~ll~vD~a~~~a~~gl~~pg~~---GaD-i~ 675 (946)
.+|++.++ ++ +++++|++++| |.+|.+- +.+++.++++.. ++++++|+++.. +........+ ... ++
T Consensus 136 ~~~~~~l~-~~----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv 208 (354)
T PRK04635 136 QLPLDYIE-QL----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVV 208 (354)
T ss_pred CCCHHHHH-hc----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEE
Confidence 89999987 33 57889999999 5799998 688888888763 799999998632 1111010011 112 45
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+.+++|+|+. .|.++|++++++++.+.+.... ...+.+ .....++.+++...|.+-
T Consensus 209 ~~S~SK~~~l----~GlRlG~~i~~~~~~~~l~~~~----------------~~~~~~----~~~~~~a~~~l~~~~~~~ 264 (354)
T PRK04635 209 LRTLSKAFAL----AGARCGFTLANEELIEILMRVI----------------APYPVP----LPVSEIATQALSEAGLAR 264 (354)
T ss_pred EechHHHhhh----hHHHHhhhhCCHHHHHHHHhhc----------------CCCCCC----HHHHHHHHHHHhcccHHH
Confidence 6678898853 3677999998877665432100 001111 111122333333223233
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEE
Q 002263 756 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLM 834 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~~~~lr 834 (946)
+++..+....+.+++.+.|++...+.+..+.+.+ ++++++ +..++.+.|.++|+.+.... +..++++|
T Consensus 265 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gv~v~~~~~~~~~~~lR 333 (354)
T PRK04635 265 MKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNY---VLAKFD--------DVDAVFKALWDAGIVARAYKDPRLANCIR 333 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcE---EEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCeEE
Confidence 4444445556678888889875212111222322 344542 45788899999999875433 22357899
Q ss_pred EEcCCCCCHHHHHHHHHHHHH
Q 002263 835 IEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 835 i~~t~~~t~~eid~~~~aL~~ 855 (946)
|++ .+.+|+++|+++|++
T Consensus 334 is~---~~~e~~~~l~~al~~ 351 (354)
T PRK04635 334 FSF---SNRAETDKLIGLIRN 351 (354)
T ss_pred EEe---CCHHHHHHHHHHHHH
Confidence 997 478999999999975
No 272
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.64 E-value=3e-14 Score=163.75 Aligned_cols=272 Identities=19% Similarity=0.194 Sum_probs=179.6
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|++.+ .++.+|++++.+++++. +. +||+||++...|+++...++..++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 142 (398)
T PRK07504 68 DMFEKRMCALEGAEDA--RATASGMAAVTAAILCQ-VK--AGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDN 142 (398)
T ss_pred HHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHH-hC--CCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 4577899999999874 45778888776555543 23 89999999999999888777666778999998764 45
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|| +.++.+....+.++|+|+++.|. |+|+++ |.
T Consensus 143 l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD-~a~a~~~~~~~~~~gaDivv~S~sK~l~g~---g~ 218 (398)
T PRK07504 143 WEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVD-NVFATPLFQKPLELGAHIVVYSATKHIDGQ---GR 218 (398)
T ss_pred HHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEE-CCccccccCCchhhCCCEEEeeccccccCC---cc
Confidence 666 7889999999998 67999999999999999999999994 34455555667789999999998 877542 21
Q ss_pred CceEEEEEchhhhhc-CCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~~~~~~~~-lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
.-+|++..+++.+.+ +. ...+..|. .+ +.+ .|+ +...+-+-+...
T Consensus 219 ~~GG~vv~~~~~i~~~~~-------------------------~~~~~~g~-~~---s~~---~A~--~~l~~L~tl~~R 264 (398)
T PRK07504 219 CLGGVVLSDKAWIEEHLQ-------------------------DYFRHTGP-SL---SPF---NAW--TLLKGLETLPVR 264 (398)
T ss_pred ceEEEEEeCcHHHHHHHH-------------------------HHHHHhCC-CC---CHH---HHH--HHHhccchHHHH
Confidence 224677666654321 10 00011111 00 111 111 233444556666
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcC-----CC-----------CcCeEEEecCC----HHHHHHHHHHcCC--eee---
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE-VQG-----LP-----------FFDTVKVKCAD----AHAIASAAYKIEM--NLR--- 388 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~-~~~-----~~-----------~~~~~~i~~~~----~~~v~~~L~~~GI--~~~--- 388 (946)
.++..+++.++.+.|++..++. |.. .+ +..-|+|.+.+ +..+.+.|.=..+ .+.
T Consensus 265 ~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~ 344 (398)
T PRK07504 265 VRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAK 344 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCC
Confidence 6777899999999999874354 321 11 12247777753 3445555542222 110
Q ss_pred e----------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 V----------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 ~----------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. +.++.||+|++.-+.++=|++|.++|.
T Consensus 345 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 394 (398)
T PRK07504 345 SLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALK 394 (398)
T ss_pred eeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 124679999998766665677777775
No 273
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.64 E-value=7.7e-14 Score=161.22 Aligned_cols=323 Identities=18% Similarity=0.211 Sum_probs=197.9
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhh--C--CC-cccccCCchHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT--G--FD-SFSLQPNAGAAGEYAGLM 554 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~--G--~~-~~~l~~~sGa~ge~a~l~ 554 (946)
..+|++.+++..++..+... ..+.....+ ..+...++.+.|++++ + ++ .+.+..++|+.++++++.
T Consensus 47 ~~lGh~~p~v~~ai~~ql~~-~~~~~~~~~--------~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alk 117 (412)
T TIGR02407 47 LNYGHNNPKLKQALIDYLAD-DGIIHSLDM--------ATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALK 117 (412)
T ss_pred ccCCCCCHHHHHHHHHHHhh-ccceecccc--------CcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHH
Confidence 35788877776666655221 111110011 1133446777888874 2 32 233446899999998888
Q ss_pred HHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCCC---CCCHHHHHHHHHhcC--
Q 002263 555 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKG---NINIEELRKAAEANR-- 616 (946)
Q Consensus 555 a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~g---~~D~e~L~~~i~~~~-- 616 (946)
.+|.|. +|++|| ...++||....+....|- .++.+|..... .-|++.+++.++++.
T Consensus 118 lAr~~t------gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 191 (412)
T TIGR02407 118 LARKVT------GRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSG 191 (412)
T ss_pred HHhhhc------CCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCC
Confidence 888762 345666 578899988776554331 23445542111 135788999997543
Q ss_pred -CCeEEEEEeCC-Ccccccc---cCHHHHHHHHHHcCCEEEEecccccccccccCCCc--------cCCCEEEeCCCccc
Q 002263 617 -DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTF 683 (946)
Q Consensus 617 -~~t~~vvvt~P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f 683 (946)
+++++|++..- +..|++. ..+++|.++|++||+++++|.++ .|+.+.|. ..+|++++ .|++
T Consensus 192 ~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~----tG~GRtG~~~a~~~~~v~PDi~~~--~K~l 265 (412)
T TIGR02407 192 VDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQ----AGCGRTGTFFSFEPAGIEPDIVCL--SKSI 265 (412)
T ss_pred CCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCccchhHHhcccCCCCCEEEe--chhc
Confidence 46788876542 4567753 25999999999999999999864 45544442 24788876 4887
Q ss_pred ccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH-HcHhhHHHHHHH
Q 002263 684 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM-MGSKGLTEASKI 762 (946)
Q Consensus 684 ~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~-lG~eGl~~~~~~ 762 (946)
+ +||-.+|++++++++ ..+.... . .++ +.|+.+.++++.+.+.. +..+.+.+.
T Consensus 266 g----~~G~pigav~~~~~~-~~~~~~~-------------~-~~T----~~gnpl~~aaa~a~l~~~i~~~~l~~~--- 319 (412)
T TIGR02407 266 S----GYGLPLALTLIKPEL-DVWKPGE-------------H-NGT----FRGNNLAFVTATAALEYYWSDDAFEKA--- 319 (412)
T ss_pred c----CCccceeEEEEchhh-hccCCCc-------------c-CCC----CCccHHHHHHHHHHHHHHhcccHHHHH---
Confidence 3 335568999998765 3322110 0 011 22455555566777774 655444433
Q ss_pred HHHHHHHHHHHHhcc---CC-ee--eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 002263 763 AILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 836 (946)
Q Consensus 763 ~~~~a~~l~~~L~~~---~~-v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~ 836 (946)
.....++++++|+.. +. +. ..+ .|.+ +.+.++. ......+.++|.++|+.+.... +..+.||++
T Consensus 320 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg-~Gl~---~~l~l~~-----~~~~~~~~~~~~~~Gv~v~~~~-~~~~~lr~~ 389 (412)
T TIGR02407 320 VQRKSEIIQERLDRIVAEYPELIKQVRG-RGLM---QGIECGD-----GDLAGKIAKAAFENGLIIETSG-PNDEVIKLL 389 (412)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEeeec-ceeE---EEEEecC-----hHHHHHHHHHHHHCCCEEeccC-CCCCEEEEE
Confidence 345567777777653 22 21 111 1222 2344431 1235688899999999874322 224789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~~i~~e 859 (946)
|+..+|++|+|+++++|.++++|
T Consensus 390 p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 390 PPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998754
No 274
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.64 E-value=9.8e-14 Score=159.16 Aligned_cols=342 Identities=17% Similarity=0.155 Sum_probs=214.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCc-ceeecCCCCCCCCCcHHHHHHHHhCCc--ccccc------CCChhhh--hh
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPA--WYTQY------TPYQAEI--AQ 95 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~~-~~~~~G~g~~~~~~p~~i~~~i~~~~~--~~t~~------~pyq~e~--sq 95 (946)
..|| ++|+++..+...|.+|+.++.. +.+-.|.|--.--+-.. +.++.- |+-.. .--||.. |.
T Consensus 28 ~~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~----~~~~~~~~~~hgigr~~~l~~~q~ka~gss 101 (444)
T TIGR03531 28 RKIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSK----LVARRHYRFCHGIGRSGDLVAPQPKAAGSS 101 (444)
T ss_pred CcCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeech----hhhhcccceecCCCCcccccccCccccCcc
Confidence 3678 7999999999999999987753 44445666322112222 222222 22221 2345552 33
Q ss_pred hHHHHHHHHHHHHHHHhCCCC-cceEEcccHHH-HHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 96 GRLESLLNFQTMIADLTGLPM-SNASLLDEGTA-AAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~-~~~sl~~~~Ta-~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
.......+++..+++++|.+. ..+.+++++|+ +...++++++..+.++++||+++..|.++.+++.. .|++++.
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~----~G~~pv~ 177 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST----AGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH----cCCeEEE
Confidence 466788889999999999973 24778899995 43333445543211589999999999999988753 5777777
Q ss_pred ecc-----------ccccc-cCC---CEeEEEEEcCCCc--eeecchHHHHHHHHhCCcEEEEEecCccccCCC------
Q 002263 174 SDL-----------KDIDY-KSG---DVCGVLVQYPGTE--GEVLDYGDFIKNAHANGVKVVMATDLLALTILK------ 230 (946)
Q Consensus 174 ~~~-----------~~l~~-i~~---~t~~v~v~~pn~~--G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~------ 230 (946)
+|. ++|++ |++ ++.++++.+|+++ |..+|+++|+++|+++|+++++++ ..+++...
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDa-Ayg~~~~~~~~~~~ 256 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNN-AYGLQSNKYMELIN 256 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEEC-cCcCcChhhhhhhh
Confidence 763 34555 654 5567777777655 478999999999999999999953 22322211
Q ss_pred CCCCcc-ceEEEecc-ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 231 PPGELG-ADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 231 ~~~~~G-aDi~v~s~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
...+.| +|+++++. |+|..|.+ .|++.++ +++.+.+.. . | +. |. ++
T Consensus 257 ~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~-------~------y---------~g-~~---~~ 305 (444)
T TIGR03531 257 KAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISK-------S------Y---------PG-RA---SA 305 (444)
T ss_pred ccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHH-------h------c---------cC-CC---CC
Confidence 122354 79999998 87876532 4666664 455554410 0 0 00 11 01
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCCCcC-eEEEecC---C--HHHHH
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFFD-TVKVKCA---D--AHAIA 377 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~~-~~~i~~~---~--~~~v~ 377 (946)
... +.+.+.+..+|.+|++++.++..++++++.+.|+++ | -++++.+.-. .+.+++. + ...+.
T Consensus 306 ----s~~--~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~-~~~~~~~~n~is~~~~~~~~~~~~~~~~g 378 (444)
T TIGR03531 306 ----SPS--LDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHG-ERLLDTPENPISSAMTLSTLKGKDPTMLG 378 (444)
T ss_pred ----hHH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cEeecCCCCceeEEEecccccccCHHHHH
Confidence 111 222233468899999999999999999999999875 4 5666422111 2233333 2 77888
Q ss_pred HHHHHcCCee-eeec-------C----------------CeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 378 SAAYKIEMNL-RVVD-------S----------------NTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 378 ~~L~~~GI~~-~~~~-------~----------------~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..|..++|.- |.+. + ..+.+......+++|||.|++.|..
T Consensus 379 ~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~ 442 (444)
T TIGR03531 379 SMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEK 442 (444)
T ss_pred HHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhh
Confidence 9998887731 1110 0 1233444445678899999888753
No 275
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.64 E-value=3.6e-14 Score=163.60 Aligned_cols=296 Identities=17% Similarity=0.178 Sum_probs=180.7
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc-cccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+.+++.+..|.+ .. .+..++|+ +|.. ++++.+. .++++|++++..++.+...+...|+
T Consensus 72 ~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 143 (394)
T PRK05942 72 FEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLT---HLALAYV-----NPGDVVLVPSPAYPAHFRGPLIAGA 143 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 4677677777777777666753 33 24444454 3432 3333332 2568999999988877777889999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccc-ccc
Q 002263 591 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGL 664 (946)
Q Consensus 591 ~vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl 664 (946)
+++.++++.+ +.+|+++++++++ +++++|++++| |.+|.+-+ .+++|.++|+++|+++++|.++.... .+.
T Consensus 144 ~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~ 220 (394)
T PRK05942 144 QIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY 220 (394)
T ss_pred EEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC
Confidence 9999998754 4699999999986 68999999998 57898862 48999999999999999999863111 111
Q ss_pred cCC------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 665 TSP------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 665 ~~p------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
..+ +.....+++.++.|.|+. .|-++|++.+++++...+.... .....+.+ +.
T Consensus 221 ~~~~~~~~~~~~~~~i~~~SfSK~~~~----~GlRiG~i~~~~~l~~~l~~~~--------------~~~~~~~~---~~ 279 (394)
T PRK05942 221 QPTSLLEIPGAKDIGVEFHTLSKTYNM----AGWRVGFVVGNRHIIQGLRTLK--------------TNLDYGIF---SA 279 (394)
T ss_pred CCCChhhCCCccccEEEEecchhccCC----hhhheeeeecCHHHHHHHHHHH--------------hhcccCCC---HH
Confidence 001 111234666778898853 3677999998877665432100 00011111 01
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH-HH
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MD 817 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L-~~ 817 (946)
. ..++..++. ...+.+++..++...+.+++.+.|++. .+.+..+++.++ ++++++ .+.+..++..++ .+
T Consensus 280 ~-q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f--~~~~~~-----~~~~~~~~~~~~l~~ 349 (394)
T PRK05942 280 L-QKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMY--LWVPCP-----VGMGSTDFALNVLQK 349 (394)
T ss_pred H-HHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeE--EEEECC-----CCCCHHHHHHHHHHH
Confidence 1 111122222 234455555555666777888888764 222212223222 345654 235667777765 47
Q ss_pred CCccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 818 YGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 818 ~Gi~~-~~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+||.+ +...|. ..+++||++.. +.++|.++|+.+.
T Consensus 350 ~gV~v~~g~~f~~~~~~~iRis~~~-----~~~~l~~~l~~l~ 387 (394)
T PRK05942 350 TGVVVTPGNAFGEGGEGYVRISLIA-----DCDRLGEALDRLK 387 (394)
T ss_pred CCEEEeCChhhCcCCCCeEEEEecC-----CHHHHHHHHHHHH
Confidence 89986 332332 25799999952 3566777776653
No 276
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=2.7e-14 Score=162.34 Aligned_cols=272 Identities=17% Similarity=0.097 Sum_probs=181.8
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---c
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~ 178 (946)
..+++.++.|.|.+. +.++.+|++|+.++++++ +. +||+||+++..|+.+...+...++.+|+++++++.+ +
T Consensus 67 ~~Le~~la~le~~~~--~v~~sSG~aAi~~~l~al-l~--~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~ 141 (395)
T PRK05967 67 DALCKAIDALEGSAG--TILVPSGLAAVTVPFLGF-LS--PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAG 141 (395)
T ss_pred HHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHh-cC--CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHH
Confidence 345678899988665 567888998888877766 33 899999999999999887766677899999999874 4
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++++| |.++.+.|+++|+++||++|++++|| +..+.+....|.++|||+++.|+ |.+++ -|+
T Consensus 142 l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD-~t~a~p~~~~pl~~GaDivv~S~tKy~~G---h~d 217 (395)
T PRK05967 142 IAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMD-NTWATPLYFRPLDFGVDISIHAATKYPSG---HSD 217 (395)
T ss_pred HHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEE-CCccCceecChhHcCCCEEEEecccccCC---CCC
Confidence 666 7889999999998 77999999999999999999999994 35555666788999999999999 55432 122
Q ss_pred CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHH
Q 002263 256 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 335 (946)
Q Consensus 256 P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~ 335 (946)
=-+|++..++++.+++- ..++..|.. + ++. ..|+...|-+-|.-..
T Consensus 218 ~~~G~v~~~~~~~~~l~-------------------------~~~~~~G~~-~---~p~-----da~l~~rgl~Tl~lR~ 263 (395)
T PRK05967 218 ILLGTVSANEKCWPQLL-------------------------EAHGTLGLC-A---GPD-----DTYQILRGLRTMGIRL 263 (395)
T ss_pred eeEEEEEcCHHHHHHHH-------------------------HHHHHcCCC-C---CHH-----HHHHHHcCcccHHHHH
Confidence 22465555554333220 001111211 0 111 1244566666666667
Q ss_pred HHHHHHHHHHHHHHhcCCCE-EEcCC-----C-----------CcCeEEEecC-----C---HHHHHHHHHH--cCCeee
Q 002263 336 QRVHGLAGTFALGLKKLGTV-EVQGL-----P-----------FFDTVKVKCA-----D---AHAIASAAYK--IEMNLR 388 (946)
Q Consensus 336 ~~~~~~a~~l~~~L~~~g~~-~~~~~-----~-----------~~~~~~i~~~-----~---~~~v~~~L~~--~GI~~~ 388 (946)
++..++|..+++.|++...+ +|..+ + +...|+|.++ + +.++.++|+= .+..+.
T Consensus 264 ~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG 343 (395)
T PRK05967 264 EHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWG 343 (395)
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCC
Confidence 77889999999999987434 23211 1 1124666654 2 3344444432 122110
Q ss_pred ----e---------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 ----V---------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 ----~---------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. +.++.||+|++.-+.++=+++|.++|.
T Consensus 344 ~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~ 390 (395)
T PRK05967 344 GYESLALHVKLGDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFA 390 (395)
T ss_pred CcceeeeeCCCChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 123578999998776666677777775
No 277
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.64 E-value=6.9e-14 Score=162.34 Aligned_cols=295 Identities=20% Similarity=0.244 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCCHHHHHHcC-------
Q 002263 519 QEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCG------- 589 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~~~~~a~~~G------- 589 (946)
.+...++.+.+++++|.+. ..+..++|++++++++.+++.+ .++++|++. .++||.........+
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 151 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGG 151 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCcccccc
Confidence 3567789999999998432 2356788888887777666654 135667764 578998877655443
Q ss_pred -----CEEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC----HHHHHHHHHHcCCEEEE
Q 002263 590 -----MKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYM 653 (946)
Q Consensus 590 -----~~vv~v~~~~~------g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~----i~~I~~ia~~~g~ll~v 653 (946)
.+++.+|.+.. ...|+++|+++++++.+++++++++..+ ..|.+. + +++|.++|++||+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~-~~~~~l~~l~~l~~~~~~~li~ 230 (413)
T cd00610 152 FGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIV-PPPGYLKALRELCRKHGILLIA 230 (413)
T ss_pred CCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCcc-CCHHHHHHHHHHHHHcCCEEEE
Confidence 24667776532 3348999999998554567777665443 458765 3 99999999999999999
Q ss_pred ecccccccccccCCC------cc--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCC
Q 002263 654 DGANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 725 (946)
Q Consensus 654 D~a~~~a~~gl~~pg------~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~ 725 (946)
|+++. ++.+.+ .+ .+|++++ .|+|+ +|.++|++++++++.+.++.... .
T Consensus 231 Dev~~----g~g~~g~~~~~~~~~~~~d~~t~--sK~l~-----~g~~~g~~~~~~~~~~~~~~~~~------------~ 287 (413)
T cd00610 231 DEVQT----GFGRTGKMFAFEHFGVEPDIVTL--GKGLG-----GGLPLGAVLGREEIMDAFPAGPG------------L 287 (413)
T ss_pred ecccc----CCCcCcchhhHhhcCCCCCeEEE--ccccc-----CccccEEEEEcHHHHHhhccCCC------------C
Confidence 99864 222221 12 3577655 48884 34668888888877766411100 0
Q ss_pred CCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCeeec-cCCCceeeeEEEeccccc
Q 002263 726 PLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFR-GVNGTVAHEFIVDLRGLK 801 (946)
Q Consensus 726 ~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~~~-~~~~~~~~e~v~~~~~~~ 801 (946)
..+..+ ++...++++.+.+..+..+.+ .++...+.++++++|++. +.+... ...+.+ +.+.+..-.
T Consensus 288 ~~~t~~----~~~~~~~a~~a~l~~l~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~---~~~~~~~~~ 357 (413)
T cd00610 288 HGGTFG----GNPLACAAALAVLEVLEEEGL---LENAAELGEYLRERLRELAEKHPLVGDVRGRGLM---IGIELVKDR 357 (413)
T ss_pred CCCCCC----cCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceE---EEEEEecCC
Confidence 011112 233344556666776655433 344556778888888764 122211 111222 233332100
Q ss_pred c---cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 802 N---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 802 ~---~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
. ........+.+.|.++|+.+.... .+.+|++++..+|++||++++++|+++
T Consensus 358 ~~~~~~~~~~~~~~~~l~~~gv~v~~~~---~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 358 ATKPPDKELAAKIIKAALERGLLLRPSG---GNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred CcCCcchHHHHHHHHHHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 0 001345789999999999875332 478999999999999999999999865
No 278
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.64 E-value=5.5e-14 Score=160.52 Aligned_cols=272 Identities=18% Similarity=0.158 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|++.|.+. +.++.+|++++.+++.. .. +||+||+++..|+.+...+...++..|++++++|..
T Consensus 52 ~~~Le~~la~l~g~~~--al~~~SG~~Al~~~l~~--l~--pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e 125 (380)
T PRK06176 52 RFALEELIADLEGGVK--GFAFASGLAGIHAVFSL--FQ--SGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLS 125 (380)
T ss_pred HHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHH--cC--CCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHH
Confidence 3457789999999876 67788999888765432 23 899999999999999888877777899999988764
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|+ +..+.+....|.++|+|++++|. |.+++|-
T Consensus 126 ~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD-~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~--- 201 (380)
T PRK06176 126 QIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVD-NTFATPYYQNPLLLGADIVVHSGTKYLGGHS--- 201 (380)
T ss_pred HHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCCEEEecCceeccCCc---
Confidence 4555 7789999999998 68999999999999999999999995 34454445566789999999998 7775431
Q ss_pred CCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
..-+|++.+++ ++.+++. ..++..|. .. ++. ..|+...|-+.+..
T Consensus 202 d~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~--~~--~~~-----~~~l~~~gl~tl~~ 247 (380)
T PRK06176 202 DVVAGLVTTNNEALAQEIA-------------------------FFQNAIGG--VL--GPQ-----DSWLLQRGIKTLGL 247 (380)
T ss_pred cceeeEEEecHHHHHHHHH-------------------------HHHHHhcC--CC--CHH-----HHHHHHhccCcHHH
Confidence 11256777654 3332220 00010010 00 011 11333445555666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC---HHHHHHHHHHc--CCeee---
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD---AHAIASAAYKI--EMNLR--- 388 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~---~~~v~~~L~~~--GI~~~--- 388 (946)
..++..+++..+.+.|++...+. ++.+ + +..-++|.+++ +.++.++|.=. +..+.
T Consensus 248 R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s~G~~~ 327 (380)
T PRK06176 248 RMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVE 327 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccCCCCCC
Confidence 66777788889999998874343 2211 1 11236666654 33444444321 22110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+ +.++.||+|++.-+.++=|++|.++|.
T Consensus 328 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~ 377 (380)
T PRK06176 328 SLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFA 377 (380)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHh
Confidence 0 124678999887765555667766664
No 279
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=7.7e-14 Score=162.78 Aligned_cols=294 Identities=18% Similarity=0.176 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------
Q 002263 521 MFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 521 ~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------- 590 (946)
...++.+.|+++++.. ...++.++|+.++++++..+|.|. +|++|| ...++||....+..+.+.
T Consensus 100 ~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~ 173 (443)
T PRK06058 100 GYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYT------GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSG 173 (443)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhh------CCCeEEEECCCcCcChHHHHhhcCCCcccccc
Confidence 4557888899988533 234678899999988888888762 345666 467889998777654331
Q ss_pred ------EEEEEcCCCCCC------CC--------HHHHHHHHHhcCCCeEEEEEeCCC-ccccccc---CHHHHHHHHHH
Q 002263 591 ------KIVSVGTDAKGN------IN--------IEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHD 646 (946)
Q Consensus 591 ------~vv~v~~~~~g~------~D--------~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~ 646 (946)
.+..+|.....+ .+ ++.+++.+. .+++++|++..-. ..|++.+ .+++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~ 251 (443)
T PRK06058 174 FGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRE 251 (443)
T ss_pred cCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 123333211110 11 222333332 3678888765433 4566642 49999999999
Q ss_pred cCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCC
Q 002263 647 NGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 718 (946)
Q Consensus 647 ~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~ 718 (946)
||+++++|.+ +.|+.+.|.+ | +|++++ .|.++ ||-.+|.+++++++.+.+....
T Consensus 252 ~gillI~DEV----~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~-----~G~Pi~av~~~~~i~~~~~~~~------- 313 (443)
T PRK06058 252 NGVVFIADEV----QTGFARTGAWFACEHEGIVPDLITT--AKGIA-----GGLPLSAVTGRAEIMDAPHPGG------- 313 (443)
T ss_pred cCCEEEEecc----ccCCCcChhhhHHHhcCCCCCEEEE--ccccc-----CCCccEEEEEcHHHHhhccCCC-------
Confidence 9999999986 4566666532 2 589887 38774 4456888888887765542110
Q ss_pred CCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeE
Q 002263 719 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEF 793 (946)
Q Consensus 719 ~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~ 793 (946)
..+. +.|+...++++.+.|..+.++++.+. .....++|.++|++. +.+. ..| .|.++
T Consensus 314 -------~~~T----~~gnpl~~aaa~a~L~~~~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~i~~vrg-~G~~~--- 375 (443)
T PRK06058 314 -------LGGT----YGGNPVACAAALAAIETIEEDDLVAR---ARQIEALMTDRLRALAAEDDRIGDVRG-RGAMI--- 375 (443)
T ss_pred -------CCCC----CCCCHHHHHHHHHHHHHHHHcCHHHH---HHHHHHHHHHHHHHHHhhCCcEEeeec-cceEE---
Confidence 0011 23466667778888888877655443 445678888888764 3332 223 23322
Q ss_pred EEecccc--cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 794 IVDLRGL--KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 794 v~~~~~~--~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+.+..- +.........+.+++.++|+.+.... +.+++||+.|+...|++|||+++++|++++++
T Consensus 376 ~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~-~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 376 AIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCG-TYGNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccC-CCCCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 2222110 00000113567788889999874322 12478999999999999999999999988764
No 280
>PRK08960 hypothetical protein; Provisional
Probab=99.64 E-value=5.1e-14 Score=162.04 Aligned_cols=298 Identities=11% Similarity=0.089 Sum_probs=176.2
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cccccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+.+|.+ ...+..++|+ +|. .++++.+. .++++|++++..|..+...+...|.+
T Consensus 68 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al---~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~ 139 (387)
T PRK08960 68 ARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGAL---LLASSLLV-----DPGKHWLLADPGYPCNRHFLRLVEGA 139 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHH---HHHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCe
Confidence 3576666666666666555643 3344444444 333 23333332 25689999999998888888999999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-c
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-L 664 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l 664 (946)
++.++++.+ +.+|+++++++++ ++++++++++| |.+|..- +.+++|+++|+++|+++++|.++..-. .. .
T Consensus 140 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~ 216 (387)
T PRK08960 140 AQLVPVGPDSRYQLTPALVERHWN---ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDA 216 (387)
T ss_pred EEEEecCcccCCCCCHHHHHHHhC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 999998765 4799999999886 67888899999 5789875 247788889999999999999763211 11 0
Q ss_pred cCCCccCCC-EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 665 TSPGYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 665 ~~pg~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
.+......+ +++.|++|.|+. .|.++|++.+++++.+.+... ......+.+...+. +
T Consensus 217 ~~~~~~~~~vi~~~S~SK~~g~----~GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~s~~~q~----a 274 (387)
T PRK08960 217 ASVLEVDDDAFVLNSFSKYFGM----TGWRLGWLVAPPAAVPELEKL--------------AQNLYISASTPAQH----A 274 (387)
T ss_pred CChhhccCCEEEEeecccccCC----cccEEEEEEcCHHHHHHHHHH--------------HhhhccCCCHHHHH----H
Confidence 111122234 456778898854 367799999987665433210 00011121111111 1
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 821 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~ 821 (946)
+.+.+.....+-+.+..+....+.+.+.+.|++. +.+.. .+.+..+ +.++++. .+.+..+++++|. ++|+.
T Consensus 275 ~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~f--~~~~~~~----~~~~~~~~~~~ll~~~gi~ 347 (387)
T PRK08960 275 ALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAV-EPQGAFY--LYADISA----FGGDAFAFCRHFLETEHVA 347 (387)
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCc-CCCeeEE--EEEeccc----cCCCHHHHHHHHHHhCCEE
Confidence 2222221112234444444556677788888764 33211 1122222 4456542 1246788998876 68988
Q ss_pred cC-CCCCC---CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 822 GP-TMSWP---VPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 822 ~~-~~~~p---~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
+. ...|. ..+++||+++. +.+++...++.|.
T Consensus 348 v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~ 382 (387)
T PRK08960 348 FTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIA 382 (387)
T ss_pred EcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 54 22232 24689999984 3444444443333
No 281
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=2e-14 Score=166.33 Aligned_cols=142 Identities=24% Similarity=0.247 Sum_probs=116.8
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---c
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~ 178 (946)
..+++.+|++.|.+. +.++.+|++++.++++++ +. +||+|+++...|+.+...+...++..|++++.+|.. +
T Consensus 67 ~~Le~~lA~leg~~~--al~~~sG~~Ai~~al~~l-l~--~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~ 141 (431)
T PRK08248 67 DVFEKRIAALEGGIG--ALAVSSGQAAITYSILNI-AS--AGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPEN 141 (431)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHH
Confidence 346789999999764 788999999988877765 33 899999999999988888877677899999999864 4
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccc
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 249 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~ 249 (946)
+++ ++++|++|++++| |.+|.+.|+++|+++||++|++++||. .++.+....|.++|+|+++.|+ |++++
T Consensus 142 l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~-t~a~~~~~~pl~~gaDivv~S~tK~lgg 214 (431)
T PRK08248 142 FEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDN-TFASPYLLRPIEHGADIVVHSATKFIGG 214 (431)
T ss_pred HHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeC-CCCccccCChhHcCCCEEEEcCccccCC
Confidence 555 7788999999888 789999999999999999999999943 4454445566789999999998 66643
No 282
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.3e-13 Score=159.73 Aligned_cols=330 Identities=16% Similarity=0.176 Sum_probs=200.6
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r 557 (946)
..+|++.+.+..++..+.... .+.....+ ..+...++.+.|+++++-+ .-.++.++||.++++++..+|
T Consensus 52 ~~lGh~~p~v~~ai~~ql~~l-~~~~~~~~--------~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr 122 (425)
T PRK07495 52 VNTGHRHPRVIAAVKAQLDRF-THTCHQVV--------PYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIAR 122 (425)
T ss_pred hccCCCCHHHHHHHHHHHhhc-cCcccCcc--------CCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH
Confidence 356888777666666552211 11110001 1123456788888887532 234778999999998888888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCC--CC---CCHHHHHHHHHh--cC
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK--GN---INIEELRKAAEA--NR 616 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~--g~---~D~e~L~~~i~~--~~ 616 (946)
.|. +|.+|+ ...++||....+....|. .++.+|++.+ |. -+++++++.+++ .+
T Consensus 123 ~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~ 196 (425)
T PRK07495 123 AAT------GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDP 196 (425)
T ss_pred Hhh------CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCC
Confidence 762 345566 578899988665443221 2445555322 21 125566777753 23
Q ss_pred CCeEEEEEeCC-Ccccccc---cCHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEEEeCCCcccc
Q 002263 617 DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFC 684 (946)
Q Consensus 617 ~~t~~vvvt~P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~hK~f~ 684 (946)
+++++|+++.- ...|++. ..+++|.++|++||+++++|.++ .|+.+.|.+ -+|++++ .|.++
T Consensus 197 ~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~----tG~gr~G~~~a~~~~gv~pDi~tl--sK~l~ 270 (425)
T PRK07495 197 QRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQ----TGFARTGKLFAMEHHEVAADLTTM--AKGLA 270 (425)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hcCCcCCCceeecccCCCCCEEee--hhhhc
Confidence 57888877643 2456553 25999999999999999999875 344444321 3577766 48774
Q ss_pred cCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH
Q 002263 685 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 764 (946)
Q Consensus 685 ~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~ 764 (946)
||-.+|.+++++++.+.+.... ..+. +.++.+.++++.+.+..+..+++.+. ..
T Consensus 271 -----~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~~~pl~~aaa~a~l~~l~~~~l~~~---~~ 324 (425)
T PRK07495 271 -----GGFPLAAVTGRAEIMDAPGPGG--------------LGGT----YGGNPLGIAAAHAVLDVIEEEDLCER---AN 324 (425)
T ss_pred -----CCccceEEEEcHHHHhccCCCC--------------cCCC----CCCCHHHHHHHHHHHHHHHhchHHHH---HH
Confidence 3445888888887766542110 0011 22456666667777888866555543 34
Q ss_pred HHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccc-cCC-CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 002263 765 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-TAG-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 837 (946)
Q Consensus 765 ~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~-~~g-~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~ 837 (946)
.+.++|+++|++. +... ..|. |.+ +.+.+..-+. ... .....+.+.+.++|+.+.... +.++++|+.|
T Consensus 325 ~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~---~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~~~~~r~~P 399 (425)
T PRK07495 325 QLGNRLKQRLASLRETVPEIADIRGP-GFM---NAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG-VHGNVIRFLA 399 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCeeeeecC-ceE---EEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEeC
Confidence 5677888888764 3221 2232 322 2233321000 000 013568888889999875332 1247899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 838 TESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 838 t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+...|++|+|++++.|++++++++
T Consensus 400 pl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 400 PITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988765
No 283
>PRK06062 hypothetical protein; Provisional
Probab=99.63 E-value=8.2e-14 Score=162.42 Aligned_cols=329 Identities=13% Similarity=0.140 Sum_probs=201.9
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.+|+|.+++..++..+. ....+.+ +.+. .+...++.+.|++++. ++. .++.++|+.++++++..+|.
T Consensus 66 ~lGh~~p~v~~Ai~~q~-~~~~~~~-~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~SGsEAve~AlklAr~ 134 (451)
T PRK06062 66 NIGHQHPKVVAAIQEQA-ARLCTVA-PAHA--------NDARSEAARLIAERAPGDLSK-VFFTNGGADANEHAVRMARL 134 (451)
T ss_pred cCCCCCHHHHHHHHHHH-HhcCCcC-CccC--------CHHHHHHHHHHHHhCCCCCCE-EEEcCChHHHHHHHHHHHHH
Confidence 56888777766666553 2111111 1111 1234578888888875 333 36688999999888888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE-----------EEEEcCCCCCC------CC-------HHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-----------IVSVGTDAKGN------IN-------IEELRKAAE 613 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~-----------vv~v~~~~~g~------~D-------~e~L~~~i~ 613 (946)
|. +|++|| ...++||....+....|.. +..++.....+ .| +++|+++++
T Consensus 135 ~t------gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~ 208 (451)
T PRK06062 135 HT------GRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE 208 (451)
T ss_pred hh------CCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence 62 355666 5678999988776554321 22332211111 13 688888886
Q ss_pred hcC-CCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEEEeCCC
Q 002263 614 ANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLH 680 (946)
Q Consensus 614 ~~~-~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~h 680 (946)
.+. +++++|++..- +..|++.+ .+++|.++|++||+++|+|.++ +||.+.|.+ -+|++++ .
T Consensus 209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~----tGfGRtG~~~a~~~~gv~PDi~t~--g 282 (451)
T PRK06062 209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVM----AGFGRTGKWFAIEHFGVVPDLITF--A 282 (451)
T ss_pred hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccc----cCCCcCcHHHHHHhcCCCCCeeee--c
Confidence 542 56888887643 44577752 2999999999999999999874 556666543 3688876 4
Q ss_pred cccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHH
Q 002263 681 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 760 (946)
Q Consensus 681 K~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~ 760 (946)
|.++ +|--.+|.+++++++.+.+....+ ...+| +.|+++.++++.+.|..+-++++.+.+
T Consensus 283 K~lg----gG~~Pigav~~~~~i~~~~~~~~~---------------~~~~T-~~gnpl~~Aaa~a~L~~l~~~~l~~~~ 342 (451)
T PRK06062 283 KGVN----SGYVPLGGVAISEAIAATFADRPY---------------PGGLT-YSGHPLACAAAVATINAMEEEGIVENA 342 (451)
T ss_pred hhhh----cCCcCcEEEEEcHHHHHHhccCCC---------------CCCCC-CCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 8773 332245666677676655421100 00011 335677778888899888777655443
Q ss_pred HHHHHHH-HHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCC--------CHHHHHHHHHHCCcccCCCC
Q 002263 761 KIAILNA-NYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI--------EPEDVAKRLMDYGFHGPTMS 826 (946)
Q Consensus 761 ~~~~~~a-~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~--------~~~~i~~~L~~~Gi~~~~~~ 826 (946)
+ ... .+|.++|++. +.++ ..|. |.. .-+-+..+.-.. ... ....+.+.|.++|+.+..
T Consensus 343 ~---~~G~~~l~~~L~~l~~~~~~v~~vrG~-Gl~-~gve~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~-- 414 (451)
T PRK06062 343 A---RIGAEVLGPGLRELAERHPSVGEVRGL-GVF-WALELVADRETR-EPLAPYGASSAAMAAVKAACKERGLLPFV-- 414 (451)
T ss_pred H---HHHHHHHHHHHHHHHhcCCcEEeEecc-ccE-EEEEEccccccc-CCCcccchhhHHHHHHHHHHHHCCcEEee--
Confidence 3 444 4777777653 3321 2232 322 112221110000 000 135788899999998632
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 WPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 ~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+.+|++|+..+|++|||++++++.++++++..
T Consensus 415 --~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 415 --NGNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred --cCCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 2478999999999999999999999999887654
No 284
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.63 E-value=8.2e-14 Score=154.69 Aligned_cols=291 Identities=19% Similarity=0.295 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHhhCC-CcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcC---------
Q 002263 521 MFNNLGEWLCTITGF-DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 589 (946)
Q Consensus 521 ~~~el~~~la~l~G~-~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G--------- 589 (946)
..-++.++++++++. +.+. ++|+|+.++.+++...|. .++|++|+ ...++||.+.....-+|
T Consensus 94 ~Ei~~Aell~~~~p~~e~vr-fvnSGTEAtmsAiRlARa------~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p 166 (432)
T COG0001 94 LEVELAELLIERVPSIEKVR-FVNSGTEATMSAIRLARA------YTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSP 166 (432)
T ss_pred HHHHHHHHHHHhcCcccEEE-EecchhHHHHHHHHHHHH------hhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCC
Confidence 345677889988876 5543 467888666555444444 46788888 57899999888644322
Q ss_pred ----C------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEec
Q 002263 590 ----M------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDG 655 (946)
Q Consensus 590 ----~------~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~ 655 (946)
+ .+..+|+ .|++.+++++++.+++++||++..- ...|++.| .++++.++|+++|+++|+|.
T Consensus 167 ~s~Gvp~~~a~~ti~~~y-----ND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 167 SSPGVPADVAKHTLVLPY-----NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred CCCCCChhhhccEEEecC-----CCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 1 2455565 4999999999988889999998753 56899864 48999999999999999998
Q ss_pred ccccccccccCC--C---ccC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCC-CCCccccCCCCCCCCCCCCC
Q 002263 656 ANMNAQVGLTSP--G---YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPL 727 (946)
Q Consensus 656 a~~~a~~gl~~p--g---~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~l-p~~~v~~~~d~~~~~~~~~~ 727 (946)
+ ..||.-+ | .+| +|+.++ .|.. +||-.+|.++.++++++++ |...+++ .
T Consensus 242 V----iTGFR~~~gGaq~~~gi~PDlttl--GKiI-----GGGlP~ga~gGr~eiM~~~~p~g~vyq------------a 298 (432)
T COG0001 242 V----ITGFRVALGGAQGYYGVEPDLTTL--GKII-----GGGLPIGAFGGRAEIMEQLAPLGPVYQ------------A 298 (432)
T ss_pred c----hhhcccCCcccccccCcCcchhhh--hhhh-----cCCcceeeeccHHHHHhhhCCCCCccc------------c
Confidence 6 4455322 1 123 688765 4776 4677899999999888765 3222221 1
Q ss_pred CCcccCccchhhHHHHHHHHHHHHcH-hh-HHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCceeeeEEEec-cc
Q 002263 728 GTIAAAPWGSALILPISYTYIAMMGS-KG-LTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDL-RG 799 (946)
Q Consensus 728 ~~i~~~~~g~~~~~~~a~a~l~~lG~-eG-l~~~~~~~~~~a~~l~~~L~~~-----~~v~~~~~~~~~~~e~v~~~-~~ 799 (946)
+.+ .|+++.+++..+.+..+-+ ++ ++++ ...++.|++.|++. +.+...+. +..+ .+.|.- ..
T Consensus 299 GT~----sgnplamaAG~atl~~l~~~~~~y~~l----~~~~~~L~~gl~~~~~~~g~~~~v~~~-gsm~-~i~F~~~~~ 368 (432)
T COG0001 299 GTL----SGNPLAMAAGLATLEELMTEEGVYERL----DALGERLAEGLRAAAERHGIPLTVNRV-GSMF-GIFFTEEGV 368 (432)
T ss_pred CCC----CCcHHHHHHHHHHHHHHHhcccHHHHH----HHHHHHHHHHHHHHHHHhCCCeEEeee-cceE-EEEecCCCC
Confidence 223 3466667777777777765 34 4333 35666777777653 33322221 2222 122221 11
Q ss_pred c--c--ccCCC-CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 800 L--K--NTAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 800 ~--~--~~~g~-~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
. . ..... ...++.+.|+++|++.+...| ...-+|. .+|++|||+++++++++++++.
T Consensus 369 ~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~---ea~flS~--ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 369 RNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF---EAGFLST--AHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred CCHHHHHhhchHHHHHHHHHHHhCCcccCCccc---cceeeec--ccCHHHHHHHHHHHHHHHHHhh
Confidence 0 0 00111 134566788899999864433 3344444 5789999999999998887765
No 285
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.2e-13 Score=161.11 Aligned_cols=297 Identities=15% Similarity=0.193 Sum_probs=190.2
Q ss_pred HHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC---------
Q 002263 522 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~--------- 590 (946)
..++.+.|+++++.+ .-.++.++||.++++++..+|.| ++|.+|| ...++||....+..+.|.
T Consensus 98 ~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 171 (457)
T PRK05639 98 AIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFS 171 (457)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCC
Confidence 447888898887643 23466889999998888888865 2355666 467899988776554331
Q ss_pred ----EEEEEcCCCCCC--------CCH--------HHHHHHHHh---cCCCeEEEEEeCC-Cccccccc---CHHHHHHH
Q 002263 591 ----KIVSVGTDAKGN--------INI--------EELRKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKI 643 (946)
Q Consensus 591 ----~vv~v~~~~~g~--------~D~--------e~L~~~i~~---~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~i 643 (946)
.++.+|...... -|. +.+++++.. ..+++++|+++.- ...|++.+ .+++|.++
T Consensus 172 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 172 PLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 245565532111 122 245555422 2468888888753 34566553 48999999
Q ss_pred HHHcCCEEEEecccccccccccCCCcc--------CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccC
Q 002263 644 IHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 715 (946)
Q Consensus 644 a~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~ 715 (946)
|++||+++++|.++ .|+.+.|.+ -+|++++ .|.++ + |-++|.+++++++.....+..
T Consensus 252 c~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~----g-G~pi~av~~~~~i~~~~~~~~---- 316 (457)
T PRK05639 252 LDEHGILLVMDEVQ----TGIGRTGKWFASEWFEVKPDLIIF--GKGVA----S-GMGLSGVIGRKELMDLTSGSA---- 316 (457)
T ss_pred HHHcCCEEEEechh----hccCcCchHHHHHhcCCCCCEEEe--chhhc----C-CCcceeEEehHHHHhhcCCCc----
Confidence 99999999999874 456666542 3699886 48774 3 445788888888776322110
Q ss_pred CCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCcee
Q 002263 716 GGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA 790 (946)
Q Consensus 716 ~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~ 790 (946)
+.| +.|+.+.++++.+.|..+.++++.+. ...+.++|+++|++. +.+. ..|. |...
T Consensus 317 --------------~~T-~~g~p~~~aaa~a~l~~l~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~~~~VrG~-Gl~~ 377 (457)
T PRK05639 317 --------------LLT-PAANPVISAAAEATLEIIEEENLLKN---ALKVGEFIKKRLLEMKESFEVIGDVRGK-GLMI 377 (457)
T ss_pred --------------ccC-CCcCHHHHHHHHHHHHHHHHccHHHH---HHHHHHHHHHHHHHHHHhCCCEEeeccc-eeEE
Confidence 111 23456667778888888877765443 345778898888763 3432 2232 3221
Q ss_pred eeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 791 HEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 791 ~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+-+..+. ..........+.+.|.++|+.+..... ..+.||+.|+..+|++|+|+++++|+++++++.
T Consensus 378 -gve~~~~~-~~~~~~~~~~~~~~~~~~Gv~~~~~g~-~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 378 -GVEIVKEN-GKPDPELTGKICWRAFELGLILPSYGM-FGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred -EEEEecCC-CCCCHHHHHHHHHHHHhCCeEEeecCC-CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 11111110 000001245788889999999754321 147999999999999999999999999988764
No 286
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.63 E-value=6.5e-14 Score=162.64 Aligned_cols=319 Identities=16% Similarity=0.203 Sum_probs=197.2
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..+|+|.+.+..++..+......+...| +...++.+.|+++++ ++. .++.++|+.++++++..+|.
T Consensus 65 ~~lGh~~p~v~~ai~~q~~~~~~~~~~~------------~~~~~la~~l~~~~p~~~~-v~f~~sGseA~e~AlklAr~ 131 (428)
T PRK12389 65 IITGHAHPHITKAITEAAENGVLYGTPT------------ELEIEFAKMLKEAIPSLEK-VRFVNSGTEAVMTTIRVARA 131 (428)
T ss_pred cccCCCCHHHHHHHHHHHHhCCccCCCC------------HHHHHHHHHHHHhCCCCcE-EEEeCCHHHHHHHHHHHHHH
Confidence 3578887777666666532211111111 123467788888774 443 36678999999888888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE-------------------EEEEcCCCCCCCCHHHHHHHHHhcCCC
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-------------------IVSVGTDAKGNINIEELRKAAEANRDN 618 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~-------------------vv~v~~~~~g~~D~e~L~~~i~~~~~~ 618 (946)
|. +|.+|| ...++||....+....|.. +..+|. .|++++++++++++++
T Consensus 132 ~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 132 YT------GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKEALDKWGDE 200 (428)
T ss_pred hh------CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHHHHHhcCCc
Confidence 62 345666 5788999887765544321 112222 3789999999877678
Q ss_pred eEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc------cC--CCEEEeCCCcccccC
Q 002263 619 LSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIP 686 (946)
Q Consensus 619 t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~------~G--aDi~~~s~hK~f~~P 686 (946)
+++|+++.- +..|++.+ .+++|.++|+++|+++++|.++ .|+ +.+. +| +|++++ .|.++
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~----tG~-Rt~~~~a~~~~gv~PDivt~--gK~lg-- 271 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVI----TAF-RFMYGGAQDLLGVEPDLTAL--GKIIG-- 271 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc----ccc-ccCcchhhHHhCCCCCeeee--chhhc--
Confidence 888888753 45677762 2999999999999999999874 444 3321 23 688876 48773
Q ss_pred CCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHH
Q 002263 687 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 766 (946)
Q Consensus 687 ~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~ 766 (946)
+| -.+|.+++++++++.+... +. ....+.+.|+.+.++++.+.|..+.++++.+ +...+
T Consensus 272 --gG-~Pi~av~~~~~i~~~~~~~--~~-------------~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~---~~~~~ 330 (428)
T PRK12389 272 --GG-LPIGAYGGRKDIMEQVAPL--GP-------------AYQAGTMAGNPASMAAGIACLEVLQQEGVYE---KLDRL 330 (428)
T ss_pred --CC-CceeEEeEHHHHHhhhccC--CC-------------cccccCCccCHHHHHHHHHHHHHHhcccHHH---HHHHH
Confidence 44 3466678888777655310 00 0011113456777888889999887766544 44567
Q ss_pred HHHHHHHHhcc---CCe--eeccCCCceeeeEEEecccccc----c--CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 002263 767 ANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLKN----T--AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 835 (946)
Q Consensus 767 a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~~~~----~--~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri 835 (946)
.++|+++|++. +.+ ...+-.+ .+. +.+....... . .......+.+.|.++|+.+..... +.+
T Consensus 331 g~~l~~~L~~l~~~~~~~~~v~r~~g-~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~-- 403 (428)
T PRK12389 331 GAMLEEGILEAAEKHGITITINRLKG-ALT-VYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY---EAW-- 403 (428)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEecCc-EEE-EEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC---CCe--
Confidence 88888888763 232 1111112 221 2221111000 0 000135788889999998754322 223
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.|+..+|++|||++++++++++++
T Consensus 404 ~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 404 FLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred eecCCCCHHHHHHHHHHHHHHHHh
Confidence 467788999999999999988764
No 287
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.1e-13 Score=161.59 Aligned_cols=299 Identities=19% Similarity=0.208 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE-------
Q 002263 521 MFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------- 591 (946)
Q Consensus 521 ~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~------- 591 (946)
...++.+.|+++++-. ...++.++|+.++++++..+|.| . +|.+|+ ...+.||....+..+.|-.
T Consensus 114 ~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~---t---gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 187 (459)
T PRK06082 114 TAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI---T---GNFKVVSLWDSFHGASLDAISVGGEACFRQGMG 187 (459)
T ss_pred HHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHh---c---CCCEEEEEeCCCcCccHHHHhhcCCcccccCCC
Confidence 3457888999998632 23467889999998888888876 2 345555 5788999886665444321
Q ss_pred -----EEEEcCCCC-----CCC------CHHHHHHHHHhcCCCeEEEEEeCCCcccccccC---HHHHHHHHHHcCCEEE
Q 002263 592 -----IVSVGTDAK-----GNI------NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG---IDEICKIIHDNGGQVY 652 (946)
Q Consensus 592 -----vv~v~~~~~-----g~~------D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~---i~~I~~ia~~~g~ll~ 652 (946)
+..+|.... ... ++++|++.++++ +++++|++..-...|.+.++ +++|.++|++||+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI 266 (459)
T PRK06082 188 PLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLI 266 (459)
T ss_pred CCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 233432111 011 246688888643 57888887654323544334 9999999999999999
Q ss_pred EecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCC
Q 002263 653 MDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKS 724 (946)
Q Consensus 653 vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~ 724 (946)
+|.+ +.|+.+.|.+ | +|++++ .|.++ +|+-.+|.+++++++........
T Consensus 267 ~DEV----~tG~GRtG~~fa~e~~gv~PDiv~~--gKgl~----gG~~P~~av~~~~~i~~~~~~~~------------- 323 (459)
T PRK06082 267 IDEI----PNGMGRTGEWFTHQAYGIEPDILCI--GKGLG----GGLVPIAAMITKDKYNTAAQISL------------- 323 (459)
T ss_pred Eech----hhCCCccchhhHhHhhCCCCCEEEe--ccccc----CCCCcceEEEEcHHHHhhccCCC-------------
Confidence 9986 4566666643 3 699886 48774 44334677777776554322110
Q ss_pred CCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCcee-eeEEEecc
Q 002263 725 QPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HEFIVDLR 798 (946)
Q Consensus 725 ~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~-~e~v~~~~ 798 (946)
.. .| +.|+.+.++++.+.|..+.++++.+ +...+.++|.++|++. +.+. ..|. |... -+++-+..
T Consensus 324 ---~~-~T-~~gnpl~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ve~~~~~~ 394 (459)
T PRK06082 324 ---GH-YT-HEKSPLGCAAALATIEVIEQEGLLE---KVKADSQFMRERLLEMKAKYPLIGDVRGI-GLLWGVELVTDRH 394 (459)
T ss_pred ---CC-CC-CCcCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHhhCCCeeeeeec-cceeEEEEccCcc
Confidence 00 11 3356777778888888887766544 4457788888888764 3322 2232 3221 12211110
Q ss_pred cccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 799 GLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 799 ~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
. +.........+...+.++|+.+.... .+.++++|...+|++|||++++++.+++.++.+
T Consensus 395 ~-~~~~~~~~~~~~~~~~~~Gvl~~~~~---~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 395 T-KERAYDEAEAVLYRCLNNGLSFKVSQ---GNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred c-cCccHHHHHHHHHHHHhCCCEEEecC---CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 0 00000113567788889999864322 478999999999999999999999999988744
No 288
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.63 E-value=7.1e-15 Score=158.76 Aligned_cols=328 Identities=17% Similarity=0.179 Sum_probs=202.4
Q ss_pred cccccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHH--HHH--hcCCC-CCCEE-EEcCCCCCCCHHH
Q 002263 513 DQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA--YHK--ARGDH-HRNVC-IIPVSAHGTNPAT 584 (946)
Q Consensus 513 e~~qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~--y~~--~~G~~-~~~~I-li~~saHg~~~~~ 584 (946)
|+.++..-+..++-..+.++.|.+. ..++..+|+-++.-++++.|- |++ .+|.. -.+-| ..++.+|.+..++
T Consensus 134 EiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ka 213 (510)
T KOG0629|consen 134 EIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKA 213 (510)
T ss_pred EecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHH
Confidence 6666666677788888999999875 455555666655333343331 222 12211 12334 4678889999999
Q ss_pred HHHcC---CEEEEEcCCCCCCCCHHHHHHHHHhcCCC---eEEEEEeCCCc-ccccccCHHHHHHHHHHcCCEEEEeccc
Q 002263 585 AAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGAN 657 (946)
Q Consensus 585 a~~~G---~~vv~v~~~~~g~~D~e~L~~~i~~~~~~---t~~vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~ll~vD~a~ 657 (946)
|.++| ..++.|++++.|.++++||+++|-+.+++ +..|-+|..+| .|.|| |+..|+++|++|+.|+|||+|
T Consensus 214 Aa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD-dL~~iadiC~k~~lWmHvDAA- 291 (510)
T KOG0629|consen 214 AAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD-DLNGIADICEKHKLWMHVDAA- 291 (510)
T ss_pred HHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC-cHHHHHHHHHhcCEEEEeecc-
Confidence 99999 58999999999999999999999765444 56666777654 89999 899999999999999999986
Q ss_pred cccccc-cc-C-------CCccCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCC----CccccCCCCCCCCC
Q 002263 658 MNAQVG-LT-S-------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS----HPVVSTGGIPAPEK 723 (946)
Q Consensus 658 ~~a~~g-l~-~-------pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~----~~v~~~~d~~~~~~ 723 (946)
.+| +. + .|-.-+|.++.|.||+++.|+.|+ .+.+++ .+...... .++.++..| ..
T Consensus 292 ---wGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCs-----a~l~r~~gll~~Cn~~~A~YLFq~dK~Y---dv 360 (510)
T KOG0629|consen 292 ---WGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCS-----AFLTREEGLLQRCNQMSAIYLFQQDKFY---DV 360 (510)
T ss_pred ---cccccccChhhHhhccCccccCceeecHHHhhcCcchhh-----HHHHHHHHHHHhhcccchhhhhccCcee---ec
Confidence 443 22 2 133458999999999998887765 344443 32222110 011111111 11
Q ss_pred CCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeee-EEEecccc
Q 002263 724 SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHE-FIVDLRGL 800 (946)
Q Consensus 724 ~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e-~v~~~~~~ 800 (946)
.+.|+.-. .+.|.-.-+-.-|-.++.-|.+|+.+..++++.+|+||.++|++. +..++..+.. +.+. |.+.-+.+
T Consensus 361 S~DTgdK~-iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe-~~nv~fw~vp~~l 438 (510)
T KOG0629|consen 361 SYDTGDKA-IQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE-HVNVCFWYVPPSL 438 (510)
T ss_pred ccccccch-hhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCc-eEEEeeccCchHh
Confidence 11222211 122222234456888899999999999999999999999999874 5555443211 2222 22211111
Q ss_pred c-ccCCC--------CHHHHHHHHHHCCcccCCCCCC---CCCEEEEEcCC-CCCHHHHHHHHHHHHHH
Q 002263 801 K-NTAGI--------EPEDVAKRLMDYGFHGPTMSWP---VPGTLMIEPTE-SESKEELDRYCDALISI 856 (946)
Q Consensus 801 ~-~~~g~--------~~~~i~~~L~~~Gi~~~~~~~p---~~~~lri~~t~-~~t~~eid~~~~aL~~i 856 (946)
. .+.+- -+-.|-.+++++|-.--.. -| .++.+|+.++. ..+.+|+|-+++.+..+
T Consensus 439 R~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~Y-qPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 439 RGWQENPERDSRLVKVAPKIKERMMKKGTTMIGY-QPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred ccCcccchhhhHHHhhCcHHHHHHHhccceeeEe-cccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 0 00000 0124566777777542111 12 13445544433 35678999988877665
No 289
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.63 E-value=1.5e-14 Score=164.30 Aligned_cols=302 Identities=12% Similarity=0.063 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH-HHHHc--CCEE
Q 002263 519 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAAMC--GMKI 592 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~-~a~~~--G~~v 592 (946)
.+.+.+.++.+++++|.+. +.+.+++|+.+..+++..+ . . + +.+++....|++... .+.+. +.++
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l---~-~----~-~~l~i~~G~~~~~~~~~a~~~~~~~~~ 110 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL---I-E----K-KSLHLSFGEFSSKFAKAVKLAPWLGEP 110 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc---c-c----c-cccEEecCHHHHHHHHHHHhhhccCCc
Confidence 4678899999999999843 3344566776665544332 1 1 1 223343444443332 23331 2377
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
..++++....++. .++ ++++.|.+++- |.+|++. |+++| +|++|++++||+++..+...+ ... .
T Consensus 111 ~~~~~~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~-pi~~I---~~~~g~~~iVDavqs~g~~~i-dv~--~ 175 (361)
T TIGR01366 111 IIVTADPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAV-PVRRP---EGSDDALVVIDATSGAGGLPV-DIA--E 175 (361)
T ss_pred eEEecCCCCCCCC-----ccC---CCCCEEEEcccCCccceec-ccccc---cccCCCeEEEEcCccccCCCC-CHH--H
Confidence 7777755444443 233 68888988875 5799999 79888 589999999999865332211 112 3
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcccc-----CCCCC---CCCCCCCCCCcccCccchhhHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS-----TGGIP---APEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~-----~~d~~---~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
+|+++++.||+|+.| ||++++++++++.+.+.....+. ..|+. ....+..+.+... ...+..
T Consensus 176 ~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~-----i~~i~~ 245 (361)
T TIGR01366 176 TDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPA-----IATLAL 245 (361)
T ss_pred CCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCch-----HHHHHH
Confidence 899999999998633 36888888886554443111110 00110 0001112222211 111112
Q ss_pred HHHHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 744 SYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 744 a~a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
..+.+..+-++ |+..+.++...+++++.++|++. +.+...++........++.+. .+++..++.++|.++||
T Consensus 246 l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~-----~g~~~~~v~~~L~~~gI 320 (361)
T TIGR01366 246 LAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV-----DDIDAATVAKILRANGI 320 (361)
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC-----CccCHHHHHHHHHHCCC
Confidence 23334444455 57777788889999999999886 233222211111011234432 36788999999999999
Q ss_pred ccCCCCCCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPV-PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 821 ~~~~~~~p~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+....... .+.+||+....+|.+|||+|+++|++++++
T Consensus 321 ~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 321 VDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred eeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 863211111 357999999999999999999999998765
No 290
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.63 E-value=6.3e-14 Score=158.91 Aligned_cols=271 Identities=19% Similarity=0.154 Sum_probs=175.1
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---c
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~ 178 (946)
..+++.+|+|.|.+. +.++++|.+|+.+.++++. + +||+||+++..+..+...++.....+|+++.++|.. +
T Consensus 58 ~~le~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll-~--~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~ 132 (386)
T PF01053_consen 58 RALEQRLAALEGGED--ALLFSSGMAAISAALLALL-K--PGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA 132 (386)
T ss_dssp HHHHHHHHHHHT-SE--EEEESSHHHHHHHHHHHHS----TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred HHHHHHHHHhhcccc--eeeccchHHHHHHHHHhhc-c--cCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence 446689999999865 7889999999988887763 3 799999999999999999988777899999999874 4
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCC-cEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~g-al~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
+++ ++++|++|++..| |.+..+.||++|+++||++| ++++|+ +.++-+.+..|-++||||++.|+ |.+++. |
T Consensus 133 l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVD-nT~atp~~~~pL~~GaDivv~S~TKyl~Gh---s 208 (386)
T PF01053_consen 133 LEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVD-NTFATPYNQNPLELGADIVVHSATKYLSGH---S 208 (386)
T ss_dssp HHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEE-CTTTHTTTC-GGGGT-SEEEEETTTTTTTS---S
T ss_pred HHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEee-ccccceeeeccCcCCceEEEeeccccccCC---c
Confidence 555 7889999999998 78999999999999999999 999994 57777777788999999999998 776521 1
Q ss_pred CCceEEEEEch--hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 255 GPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 255 GP~~g~l~~~~--~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
.=-+|.+.++. ++.+++. ..++.-| +.. ++. ..|+...|-+-+.
T Consensus 209 dv~~G~vv~~~~~~~~~~l~-------------------------~~~~~~G--~~~--~p~-----da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 209 DVMGGAVVVNGSSELYDRLR-------------------------EFRRLLG--ATL--SPF-----DAWLLLRGLRTLP 254 (386)
T ss_dssp SE-EEEEEESSHHHHHHHHH-------------------------HHHHHHT---B----HH-----HHHHHHHHHTTHH
T ss_pred ceeeEEEEECchhhhhhhhc-------------------------chhhhcC--ccc--hHH-----HHHHHhcCCCcHH
Confidence 11157777664 3333220 0011111 111 111 1123334444455
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC-HHHHHHHHHHcCCe-----ee-
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD-AHAIASAAYKIEMN-----LR- 388 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~-~~~v~~~L~~~GI~-----~~- 388 (946)
-..++..++|..+++.|++...++ |..+ + ...-|+|.+++ ..++.+.+..-.++ +.
T Consensus 255 ~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg 334 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGG 334 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCC
Confidence 566777889999999999885464 3311 1 12357888776 32333333332332 10
Q ss_pred ---e---------------------ecCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 389 ---V---------------------VDSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 389 ---~---------------------~~~~~lris~~~~~t~edid~ll~~l 415 (946)
. +.++.||+|++.-+.++=|++|-++|
T Consensus 335 ~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL 385 (386)
T PF01053_consen 335 VESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQAL 385 (386)
T ss_dssp SS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHH
T ss_pred cccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhc
Confidence 0 12467999998766555556666655
No 291
>PLN02509 cystathionine beta-lyase
Probab=99.63 E-value=3.5e-14 Score=164.54 Aligned_cols=273 Identities=16% Similarity=0.159 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|++.|.+. +.++.+|++++.+++ ++ .. +||+||+++..|+.+...++......|++++.++..
T Consensus 135 ~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~l-l~--~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e 208 (464)
T PLN02509 135 RDALESLLAKLDKADR--AFCFTSGMAALSAVT-HL-IK--NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLD 208 (464)
T ss_pred HHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HH-hC--CCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHH
Confidence 4567789999998764 667788887765433 32 23 899999999999998877765556789999998764
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+|++++|. |++++| |
T Consensus 209 ~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD-~A~a~~~~~~pl~~gaDivv~S~tK~l~G~---g 284 (464)
T PLN02509 209 EVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVD-NSIMSPVLSRPLELGADIVMHSATKFIAGH---S 284 (464)
T ss_pred HHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEE-CCccccccCChhhcCCcEEEecCcccccCC---C
Confidence 4555 7889999999998 78999999999999999999999994 34555655667789999999998 877643 2
Q ss_pred CCceEEEEEchhh-hhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~~~-~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
+..+|+++++++. .+.+ + ..++..++. + .+ ..| |+...+-+-+..
T Consensus 285 dv~gG~v~~~~~~l~~~~----------------~---------~~~~~~g~~-l---~p---~~A--~l~lr~L~tL~~ 330 (464)
T PLN02509 285 DVMAGVLAVKGEKLAKEV----------------Y---------FLQNSEGSG-L---AP---FDC--WLCLRGIKTMAL 330 (464)
T ss_pred ccceeEEEeccHHHHHHH----------------H---------HHHHhcCCC-c---CH---HHH--HHHHhhhhhHHH
Confidence 3346888886543 2111 0 000101110 1 11 111 123334444555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC---HHHHHHHHHHc--CCeee---
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD---AHAIASAAYKI--EMNLR--- 388 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~---~~~v~~~L~~~--GI~~~--- 388 (946)
..++..+++.++++.|++...++ |..+ + +..-|+|.+.+ +..+.+.|.-. +..+.
T Consensus 331 R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~a~slG~~~ 410 (464)
T PLN02509 331 RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVK 410 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcceEcccCCCCC
Confidence 66777899999999999874353 3211 1 11246666644 34455544411 21110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 389 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ +.++.||+|++.-+.++=|++|.++|..
T Consensus 411 SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 411 SLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRT 461 (464)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcc
Confidence 0 1246799999887655556777777754
No 292
>PRK12403 putative aminotransferase; Provisional
Probab=99.63 E-value=2.5e-13 Score=158.81 Aligned_cols=341 Identities=16% Similarity=0.184 Sum_probs=202.0
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
.||++.+++..++..+.... .+. +.+ ..+..+...++.+.|+++++.+ ...++.++|++++++++.++|.|
T Consensus 67 ~lGh~hp~v~~A~~~q~~~~-~~~--~~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~ 138 (460)
T PRK12403 67 NLGYGRKDLAAAAARQMEQL-PYY--NMF-----FHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRY 138 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhC-CCe--ecc-----cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHH
Confidence 46777666655555552211 111 111 0112234567889999998733 22366789999999999999988
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE-----------EEEEcCCCC-----C-------CCCHHHHHHHHHh-
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-----------IVSVGTDAK-----G-------NINIEELRKAAEA- 614 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~-----------vv~v~~~~~-----g-------~~D~e~L~~~i~~- 614 (946)
...+|..++.+|+ ...++||....+..+.|.+ +..+|...- + ..++++|++.+.+
T Consensus 139 ~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~ 218 (460)
T PRK12403 139 WQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL 218 (460)
T ss_pred HHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh
Confidence 6555533344454 3467899877766554433 334432110 0 0124567666643
Q ss_pred cCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcc
Q 002263 615 NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKT 682 (946)
Q Consensus 615 ~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~ 682 (946)
..+++++|+++.- +..|++.++ +++|.++|++||+++|+|.++ +|+.+.|.+ | +|++++ .|.
T Consensus 219 ~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~----tGfGRtG~~~a~e~~gv~PDiv~~--gK~ 292 (460)
T PRK12403 219 GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI----GGFGRTGEWFAHEHFGFEPDTLSI--AKG 292 (460)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCcCchhhhhhhcCCCCCeEEE--ccc
Confidence 3367888877643 456776632 999999999999999999874 567666643 2 588876 487
Q ss_pred cccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHH
Q 002263 683 FCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKI 762 (946)
Q Consensus 683 f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~ 762 (946)
++ +|--.+|.+++++++.+.+.... + ... ..+++.|+.+.++++.+.|..+-++++.+.++
T Consensus 293 lg----gG~~Piga~v~~~~i~~~~~~~~-----------~--~~~-~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~- 353 (460)
T PRK12403 293 LT----SGYVPMGGLVLSKRIAEALVEQG-----------G--VFA-HGLTYSGHPVAAAVAIANLKALRDEGVVTRVK- 353 (460)
T ss_pred cc----ccccceEEEEECHHHHHHHhcCC-----------C--ccc-cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH-
Confidence 74 33213455557777655442100 0 000 01113456777888889999887776543321
Q ss_pred HHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCC----HHHHHHHHHHCCcccCCCCCCCCCEE
Q 002263 763 AILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE----PEDVAKRLMDYGFHGPTMSWPVPGTL 833 (946)
Q Consensus 763 ~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~----~~~i~~~L~~~Gi~~~~~~~p~~~~l 833 (946)
..+.++|++.|++. +.+. +.|. |.. .-+-+..+.-....... ...+.+.+.++|+.+... .+.+
T Consensus 354 -~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~-~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~~ 426 (460)
T PRK12403 354 -DDTGPYLQRCLREVFGDHPLVGEVQGA-GLV-AALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----LGRM 426 (460)
T ss_pred -HHHHHHHHHHHHHHHhcCCCEEeEeec-ceE-EEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----CCEE
Confidence 15667888877653 3321 2231 322 11112111000000001 234556678899987522 3579
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 834 MIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 834 ri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+++|....|++|+|+++++|.++++++.
T Consensus 427 ~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 427 IMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998875
No 293
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=1.3e-14 Score=164.67 Aligned_cols=281 Identities=17% Similarity=0.173 Sum_probs=178.5
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++++++.+|++..++..++|++. ++.++++.+. .+ ++++|+++.+.|+.+...++..|++++.+|.++++.
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e--~i~~~~~~~~-~~---g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~ 133 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADE--GIELLIRAFC-EP---GKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQ 133 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-CC---CCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 36788999999998776666667642 3334445442 11 237899998877777777889999999999988889
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc--CCEEEEecccccccccccCCC---ccCCC-EE
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPG---YIGAD-VC 675 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~gl~~pg---~~GaD-i~ 675 (946)
+|++++++++ +++++|++++|| .+|.+. +.+++.++++.. +.++++|+++.. +....... ..... ++
T Consensus 134 ~d~~~l~~~~----~~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~~n~iv 207 (351)
T PRK01688 134 LDLPAIADNL----DGVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEYPHLVI 207 (351)
T ss_pred CCHHHHHHhc----cCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhCCCEEE
Confidence 9999999887 478899999995 799987 566665555432 689999998632 11110100 01123 45
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+.+++|+|+. .|-++|++.+++++.+.+.... ...+++ .....++.++|...+.+-
T Consensus 208 ~rSfSK~~gl----aGlRiGy~i~~~~~i~~l~~~~--------------~~~~v~------~~~~~~a~~~L~~~~~~~ 263 (351)
T PRK01688 208 LRTLSKAFAL----AGLRCGFTLANEEVINLLLKVI--------------APYPLS------TPVADIAAQALSPQGIAA 263 (351)
T ss_pred EecchHhhcC----HHHHHhHHhCCHHHHHHHHhcc--------------CCCCCC------HHHHHHHHHHHhcchHHH
Confidence 5677887753 4677899998877655432110 001121 111122223332222233
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CC-CCC
Q 002263 756 LTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WP-VPG 831 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p-~~~ 831 (946)
+++..+....+.+++.+.|+++ +...++. .+ . -+.+++. +..++.++|.++||.+.... ++ ..+
T Consensus 264 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps-~~-n--fi~~~~~--------~~~~l~~~L~~~gi~vr~~~~~~~~~~ 331 (351)
T PRK01688 264 MRERVAEINANRQWLIAALKEIPCVEQVFDS-ET-N--YILARFT--------ASSAVFKSLWDQGIILRDQNKQPGLSN 331 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CC-c--EEEEEcC--------CHHHHHHHHHHCCeEEEECCCcCCCCC
Confidence 4455555566778899999875 2222221 12 2 1344442 46889999999999875432 32 357
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~ 854 (946)
++||++. +.+|+++|+++|+
T Consensus 332 ~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 332 CLRITIG---TREECQRVIDALR 351 (351)
T ss_pred eEEEeCC---CHHHHHHHHHhhC
Confidence 8999985 6899999999873
No 294
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=2.3e-14 Score=164.38 Aligned_cols=272 Identities=18% Similarity=0.084 Sum_probs=182.7
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|.+ ++.++++||+++.++++++ +. +||+||++...|+.+...+...++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al-~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~ 142 (394)
T PRK07050 68 LALAQRLAEIEGGR--HALLQPSGLAAISLVYFGL-VK--AGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAG 142 (394)
T ss_pred HHHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHH-hC--CCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHH
Confidence 46778999999976 4888899999988877766 33 89999999999999887766556778999999976 45
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ +.++|++|++.+| |.+|.+.|+++|+++||++|+++++| +.++.+....|.++|+||++.|. |.+++ .|+
T Consensus 143 l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD-~a~a~~~~~~~l~~GaDi~v~S~tK~~~g---~~~ 218 (394)
T PRK07050 143 IADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAID-NTYSAGLAFKPFEHGVDISVQALTKYQSG---GSD 218 (394)
T ss_pred HHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEE-CCcccccccCHHHcCCeEEEEECCceecC---CCC
Confidence 666 7889999999998 67899999999999999999999994 34566666677889999999998 88753 122
Q ss_pred CceEEEEE-chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
.-+|.+.+ ++++.+++- ..|..-|. | ..+.. .|+...|-+.+...
T Consensus 219 ~~gG~v~~~~~~~~~~~~-------------------------~~~~~~G~---~-~~~~~-----a~l~lr~l~tl~~R 264 (394)
T PRK07050 219 VLMGATITADAELHAKLK-------------------------LARMRLGI---G-VSADD-----CSLVLRGLPSLQVR 264 (394)
T ss_pred eeEEEEEECCHHHHHHHH-------------------------HHHHhcCC---C-CCHHH-----HHHHHcCCCcHHHH
Confidence 12344444 445544330 00111110 0 01111 13344555556666
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC------HHHHHHHHHHcCCeee---
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD------AHAIASAAYKIEMNLR--- 388 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~------~~~v~~~L~~~GI~~~--- 388 (946)
.++..+++.++++.|++...+. ++.+ + ....|+|.+.+ ..++.++|+..++-++
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~ 344 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGG 344 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCC
Confidence 6777888889999998773243 2210 1 11235555532 4566666665554221
Q ss_pred ---ee---------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 ---VV---------------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 ---~~---------------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.+ .++.||+|++.-+.++=+++|.++|.
T Consensus 345 ~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~ 390 (394)
T PRK07050 345 ACSLAMPYDVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALE 390 (394)
T ss_pred ccceEeeCcccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHH
Confidence 00 12568999887765555566666664
No 295
>PRK08912 hypothetical protein; Provisional
Probab=99.63 E-value=6.8e-14 Score=161.00 Aligned_cols=301 Identities=15% Similarity=0.136 Sum_probs=184.6
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc-ccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~-~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+.+++.+..|.+ .. .+. +++++++.. ++++.+. .++++|+++...|+.+...+...|+
T Consensus 62 ~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~---~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~ 133 (387)
T PRK08912 62 MMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALA---AALLALV-----EPGDEVVLFQPLYDAYLPLIRRAGG 133 (387)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHH---HHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCC
Confidence 3677677766777777666653 33 444 444444432 2333321 2468899999988888888999999
Q ss_pred EEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--
Q 002263 591 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-- 663 (946)
Q Consensus 591 ~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g-- 663 (946)
+++.+++++ ++.+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|.++... ..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 210 (387)
T PRK08912 134 VPRLVRLEPPHWRLPRAALAAAFS---PRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRR 210 (387)
T ss_pred EEEEEecCcccCcCCHHHHHHHhC---ccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCC
Confidence 999999865 57899999999986 68889999999 5789875 24888999999999999999986311 111
Q ss_pred cc----CCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 664 LT----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 664 l~----~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
.. .++..+-++++.+++|.|+.| |.++|++.+++++.+.+... ......+.++..+.
T Consensus 211 ~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~l~~~--------------~~~~~~~~~~~~q~- 271 (387)
T PRK08912 211 HIPLMTLPGMRERTVKIGSAGKIFSLT----GWKVGFVCAAPPLLRVLAKA--------------HQFLTFTTPPNLQA- 271 (387)
T ss_pred CcChhhCCCccCceEEEeechhhccCc----CceeEEEecCHHHHHHHHHH--------------HhhccccCChHHHH-
Confidence 10 011123468889999988643 67799999887665443110 00001111110011
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-H
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 817 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~ 817 (946)
++..++. -..+-+++..++..++.+++.+.|++. +.+ + .+++.++ ++++++... ...+..+++++|. +
T Consensus 272 ---~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~-~~~g~~~--l~~~l~~~~--~~~~~~~~~~~l~~~ 341 (387)
T PRK08912 272 ---AVAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRIGFPV-L-PSQGTYF--LTVDLAPLG--LAEDDVAFCRRLVEE 341 (387)
T ss_pred ---HHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCcc-c-CCCcceE--EEecccccC--CCCCHHHHHHHHHhc
Confidence 1111221 112223444555567778888888875 332 2 2223222 344554211 1246788999976 5
Q ss_pred CCcccC-CCCC----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 818 YGFHGP-TMSW----PVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 818 ~Gi~~~-~~~~----p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+|+.+. ...| +..+++|+++.. ..+++++.++.|.+.+
T Consensus 342 ~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 342 AGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAAR 384 (387)
T ss_pred CCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 799753 2223 235799999985 4677777776666544
No 296
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.63 E-value=4.7e-14 Score=163.13 Aligned_cols=306 Identities=13% Similarity=0.098 Sum_probs=191.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~---~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+..|.+ .. .+..++|++.. ..++++.+. .+++.|+++...+..+...++..|++
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a--l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 153 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA--LAMLPSCFI-----NPGDVTLMTVPGYPVTGTHTKYYGGE 153 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH--HHHHHHHhC-----CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 577676766777776666754 33 46667776532 223333332 25688999998877777789999999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccc-ccccc
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGLT 665 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl~ 665 (946)
++.++++++ +.+|++++++++. +++++|++++| |.+|.+-+ .+++|.++|+++|+++++|.++... ..+-.
T Consensus 154 v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~ 230 (410)
T PRK06290 154 VYNLPLLEENNFLPDLDSIPKDIK---EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP 230 (410)
T ss_pred EEEEecCCCcCCcCCHHHHHHhhc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC
Confidence 999999764 4679999999886 68899999999 57999862 3789999999999999999986421 11100
Q ss_pred CC-----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 666 SP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 666 ~p-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
.+ ...+.+|++.|+.|+|+.| |.++|++++++++...+... +...+++++ ...
T Consensus 231 ~s~~~~~~~~~~~I~i~SfSK~~g~~----GlRiG~ii~~~~l~~~l~~~--------------~~~~~~~~~----~~~ 288 (410)
T PRK06290 231 LSFLSVPGAKEVGVEIHSLSKAYNMT----GWRLAFVVGNELIVKAFATV--------------KDNNDSGQF----IAI 288 (410)
T ss_pred cChhcCCCccccEEEEeechhhcCCc----hhheEeEEeCHHHHHHHHHH--------------HhccccCCc----HHH
Confidence 01 1123458888888988543 67899999887665443210 000111111 111
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccc-c-CCCCHHHHHHHHHHC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN-T-AGIEPEDVAKRLMDY 818 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~-~-~g~~~~~i~~~L~~~ 818 (946)
..++..+|.. + +-+++..++...+.+++.+.|++. .+.+..+.+.++ ++++++.... . ...+..+++++|.++
T Consensus 289 q~aa~~~l~~-~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~--l~v~lp~~~~~~~~~~~~~~~~~~Ll~~ 363 (410)
T PRK06290 289 QKAGIYALDH-P-EITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFY--LYVKAPKGTKSGIKFENAEEFSQYLIKE 363 (410)
T ss_pred HHHHHHHhhC-c-HHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeE--EEEECCCccccCCCCCCHHHHHHHHHHh
Confidence 1111222221 1 223444555567788888988875 222212222221 3456542100 0 013678999999988
Q ss_pred Cccc--CCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Q 002263 819 GFHG--PTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEI 860 (946)
Q Consensus 819 Gi~~--~~~~~p~~~~lri~~t~-~~t~~eid~~~~aL~~i~~e~ 860 (946)
|+.+ +...| ++++||+++. ..++++.++|+++|.+++..+
T Consensus 364 ~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 364 KLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 7543 32223 4789999963 457889999999998887553
No 297
>PRK12414 putative aminotransferase; Provisional
Probab=99.62 E-value=3.2e-14 Score=163.52 Aligned_cols=296 Identities=12% Similarity=0.107 Sum_probs=182.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCCc---cc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDS---FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~---~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+++++++++|.+. .. +.+++|+++.. ++++.+. .++++|+++...|..+...++..|.
T Consensus 65 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~ 136 (384)
T PRK12414 65 MAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLY---AAISALV-----HPGDEVIYFEPSFDSYAPIVRLQGA 136 (384)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHH---HHHHHhc-----CCCCEEEEeCCCccchHHHHHHcCC
Confidence 46888888899999999999852 22 33444444443 2333331 2568899999888877777889999
Q ss_pred EEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccc-ccccc-
Q 002263 591 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL- 664 (946)
Q Consensus 591 ~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl- 664 (946)
+++.++.++ ++.+|+++|+++++ +++++|++++| |.+|.+- .++++|+++|+++|+++++|+++.. .+.+-
T Consensus 137 ~~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~ 213 (384)
T PRK12414 137 TPVAIKLSPEDFRVNWDEVAAAIT---PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR 213 (384)
T ss_pred EEEEEecCccccccCHHHHHhhcC---cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC
Confidence 999999875 46799999999996 68899999999 5789873 3699999999999999999998642 11110
Q ss_pred cCC-Ccc----CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 665 TSP-GYI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 665 ~~p-g~~----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
..+ ..+ +--+++.|++|.|+.| |.++|++.+++++...+... ......+.+...+.
T Consensus 214 ~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRiG~~v~~~~l~~~l~~~--------------~~~~~~~~s~~~q~- 274 (384)
T PRK12414 214 HHSMARHRELAERSVIVSSFGKSYHVT----GWRVGYCLAPAELMDEIRKV--------------HQFMVFSADTPMQH- 274 (384)
T ss_pred ccCcccCcCccCcEEEEecccccccCc----cceEEEEecCHHHHHHHHHH--------------HhheecCCCcHHHH-
Confidence 001 111 1227778889988644 67899999887765443210 00011121111111
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHH-HHHHH
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMD 817 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~-~~L~~ 817 (946)
++..++. .+ +.+.+..+...++.+++.+.|++. +.+ . .+.+.++ ++++++... +.+..+++ +.|.+
T Consensus 275 ---a~~~~l~-~~-~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~-~~~gg~~--~~~~~~~~~---~~~~~~~~~~~l~~ 342 (384)
T PRK12414 275 ---AFAEALA-EP-ASYLGLGAFYQRKRDLLARELAGSRFEL-L-PSEGSFF--MLARFRHFS---DESDSDFVLRLIRD 342 (384)
T ss_pred ---HHHHHhc-CC-hHHHHHHHHHHHHHHHHHHHHHhCCCee-c-CCCcceE--EEEcccccC---CCCHHHHHHHHHHh
Confidence 1112221 11 223334444556778888888874 332 2 2223232 334554211 12345566 45568
Q ss_pred CCcccCC-CCCC---C-CCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 818 YGFHGPT-MSWP---V-PGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 818 ~Gi~~~~-~~~p---~-~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
+|+.+.. ..|. . .+++||++.. +++++++.++.|.
T Consensus 343 ~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~~~rl~ 382 (384)
T PRK12414 343 ARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLVEGARRLC 382 (384)
T ss_pred CCEEEecchhhcCCCCCCCEEEEEecC--CHHHHHHHHHHHh
Confidence 8997533 2232 1 4689999984 5777777776664
No 298
>PRK07550 hypothetical protein; Provisional
Probab=99.62 E-value=1e-13 Score=159.42 Aligned_cols=350 Identities=12% Similarity=0.094 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCc--cccccCCCCcccccccHHHHHHHHHHHHHHhhCC
Q 002263 458 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWP--SFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 535 (946)
Q Consensus 458 e~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~--~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~ 535 (946)
-.++.+.+.++++.+. ..+.|+++.+..++.......... .-.....|.+ .+|..++...+.+++.+..|.
T Consensus 14 ~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~ 86 (386)
T PRK07550 14 IPEVRAWLAGYDGADG----PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEGLPELREAYAAHYSRLYGA 86 (386)
T ss_pred HHHHHHHHHHHhhcCC----CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCCCHHHHHHHHHHHHHHhCC
Confidence 3566777777665443 356777776655432222111000 0001122333 367777777777777777675
Q ss_pred C--cccccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-C-CCCCHHHHHH
Q 002263 536 D--SFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIEELRK 610 (946)
Q Consensus 536 ~--~~~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~-g~~D~e~L~~ 610 (946)
. ...+..++|+ ++. .++++.+. .++++|+++...++.+...++..|++++.++.++ + ..+|++++++
T Consensus 87 ~~~~~~i~~t~G~~~al---~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~ 158 (386)
T PRK07550 87 AISPEQVHITSGCNQAF---WAAMVTLA-----GAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEA 158 (386)
T ss_pred CCCcceEEEecCcHHHH---HHHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHH
Confidence 4 2334444454 343 23333321 2568899999888777777889999999999974 2 4689999999
Q ss_pred HHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccccccccccCC---C---ccCC-CEEEeCCC
Q 002263 611 AAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---G---YIGA-DVCHLNLH 680 (946)
Q Consensus 611 ~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p---g---~~Ga-Di~~~s~h 680 (946)
+++ +++++|++++|| .+|.+-+ ++++|+++|+++|+++++|.++..-......+ . ..+. .+++.+++
T Consensus 159 ~~~---~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 235 (386)
T PRK07550 159 LIT---PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFS 235 (386)
T ss_pred Hhc---ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecch
Confidence 997 678888888895 6887752 48999999999999999999763211000011 1 1122 25577889
Q ss_pred cccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHH
Q 002263 681 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 760 (946)
Q Consensus 681 K~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~ 760 (946)
|+|+.| |.++|++.+++++...+.... .....+.+..++. ++...+..+ ++-+++..
T Consensus 236 K~~g~~----G~RiG~i~~~~~~~~~~~~~~--------------~~~~~~~s~~~q~----~~~~~l~~~-~~~~~~~~ 292 (386)
T PRK07550 236 KSYALT----GHRVGAVVASPARIAEIEKFM--------------DTVAICAPRIGQI----AVAWGLPNL-ADWRAGNR 292 (386)
T ss_pred hhccCc----ccceEeeecCHHHHHHHHHHH--------------hhcccCCCcHHHH----HHHHHhccH-HHHHHHHH
Confidence 988544 677999998876554332100 0011121111121 111222211 22233344
Q ss_pred HHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcccCC-CCCC--CCCEEEEE
Q 002263 761 KIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPT-MSWP--VPGTLMIE 836 (946)
Q Consensus 761 ~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~~-~~~p--~~~~lri~ 836 (946)
+...++.+++.+.|+++..+.... .+..+ ++++++. .+.+..+++++|. ++|+.+.. ..|. ..+++||+
T Consensus 293 ~~~~~~~~~l~~~L~~~~~~~~~~-~g~~~--~~~~~~~----~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis 365 (386)
T PRK07550 293 AEIARRRDAFRAVFARLPGWELLA-SGAYF--AYVRHPF----PDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLA 365 (386)
T ss_pred HHHHHHHHHHHHHHHhCCCceeCC-CceEE--EEecCCC----CCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEE
Confidence 445567788888887642221111 22221 3455431 1467889999875 67998642 2232 24689999
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALISI 856 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~~i 856 (946)
++. .+.+++++.++.|.+.
T Consensus 366 ~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 366 FAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred eec-CCHHHHHHHHHHHHhh
Confidence 974 3578888888887653
No 299
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.62 E-value=2.3e-13 Score=158.58 Aligned_cols=328 Identities=15% Similarity=0.162 Sum_probs=200.2
Q ss_pred ccceeeecCCCcccccccccCccccccCCC-CcccccccHHHHHHHHHHHHHHhhCCC----cccccCCchHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPF-APADQAQGYQEMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLM 554 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~-~p~e~~qG~~~~~~el~~~la~l~G~~----~~~l~~~sGa~ge~a~l~ 554 (946)
..+|+|.+++..++..+... ..+ .++. .+ .+...++.+.|+++++.. ...+..++||.++++++.
T Consensus 51 ~~lGh~~p~i~~ai~~q~~~-~~~--~~~~~~~-------~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~Alk 120 (442)
T TIGR00709 51 LALGHNHPNMKQKILDYLQS-GLP--LHTLDLT-------TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIK 120 (442)
T ss_pred hcCCCCCHHHHHHHHHHHHh-ccC--ccccccC-------cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHH
Confidence 35788877776666655321 111 1110 01 133457888899988532 234556899999988888
Q ss_pred HHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCCCCC--------CH----HHHH
Q 002263 555 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNI--------NI----EELR 609 (946)
Q Consensus 555 a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~g~~--------D~----e~L~ 609 (946)
.+|.|. +|.+|+ ...++||....+....|. .+..++....... +. +.++
T Consensus 121 lAr~~t------gr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 121 LAKTYT------GRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHhc------CCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 888762 345566 578899998887655441 1334443221111 11 2234
Q ss_pred HHHHh---cCCCeEEEEEeCC-Ccccccc---cCHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCE
Q 002263 610 KAAEA---NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADV 674 (946)
Q Consensus 610 ~~i~~---~~~~t~~vvvt~P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi 674 (946)
+.+++ ..+++++|++... +..|++. ..+++|.++|++||+++|+|.+ +.||.+.|.+ -+|+
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDi 270 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEV----QAGFGRSGTMFAFEHAGIEPDF 270 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCCCCchhHHHHcCCCCcE
Confidence 44432 2257888888764 4556653 2599999999999999999986 4566666543 2699
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+++ .|.++ + |..+|.+++++++..+.+.. . .+. +.|+.+.++++.+.|..+.++
T Consensus 271 v~~--gK~l~----~-G~Pigav~~~~~~~~~~~~~--------------~-~~T----~~gnpla~aaa~a~L~~i~~~ 324 (442)
T TIGR00709 271 VVM--SKAVG----G-GLPLAVLLIAPEFDAWQPAG--------------H-TGT----FRGNQLAMVTGTEALNYWKDD 324 (442)
T ss_pred EEE--ccccc----C-CcccEEEEEchHHhccCCCc--------------C-CCC----CCcCHHHHHHHHHHHHHHHhc
Confidence 886 48774 3 46688888887643222110 0 011 334666777788888888777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEeccccc--c------cCCC-CHHHHHHHHHHCCc
Q 002263 755 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK--N------TAGI-EPEDVAKRLMDYGF 820 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~--~------~~g~-~~~~i~~~L~~~Gi 820 (946)
++.+. ...+.++|.++|+++ +.++ +.|. |... .+.+.... . .... ....+.+.+.++|+
T Consensus 325 ~l~~~---~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl~~---~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 397 (442)
T TIGR00709 325 NLAQN---AQERGERITSFLDDMIKEHPCIGNVRGR-GLMQ---GIMIVDERQSKDATGAYPRDCELAAAIQGACFENGL 397 (442)
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHhCCCeeeeecc-ceEE---EEEEccCcccccccccCCcchHHHHHHHHHHHHCCe
Confidence 66553 446677888888763 3321 2232 3221 12221100 0 0000 14567888889999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+.... ...++||+.|+..+|++|+|++++++.++++++.
T Consensus 398 l~~~~~-~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 437 (442)
T TIGR00709 398 LLETGG-REGEVFRLLCPITIDQEECEEGISRFKQAVEEAL 437 (442)
T ss_pred EEeecC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 864321 1147899999999999999999999999988763
No 300
>PRK07337 aminotransferase; Validated
Probab=99.62 E-value=5.7e-14 Score=161.66 Aligned_cols=303 Identities=15% Similarity=0.155 Sum_probs=179.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+..|.+ ...+..++| +++. .++++.+. .++++|+++...|+.+...++..|.+
T Consensus 66 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al---~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~ 137 (388)
T PRK07337 66 ALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAAL---LLACLALV-----ERGDEVLMPDPSYPCNRHFVAAAEGR 137 (388)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHH---HHHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 3576666666666666656653 333444444 4333 22333331 25689999999888888888899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc-c
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-L 664 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g-l 664 (946)
++.++.+++ +.+|+++++++++ +++++|++++| |.+|.+- .++++|+++|+++|+++++|.++... ..+ .
T Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~ 214 (388)
T PRK07337 138 PVLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP 214 (388)
T ss_pred EEEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC
Confidence 999998753 5899999999986 78899999999 5789875 25899999999999999999875311 111 1
Q ss_pred cCCCccCCCEE-EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 665 TSPGYIGADVC-HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 665 ~~pg~~GaDi~-~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
.....++.+++ +.+++|.|+.| |.++|++.+++++...+.... ....++.+...+. +
T Consensus 215 ~~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~~~~~~l~~~l~~~~--------------~~~~~~~s~~~q~----~ 272 (388)
T PRK07337 215 VSALSLGDDVITINSFSKYFNMT----GWRLGWLVVPEALVGTFEKLA--------------QNLFICASALAQH----A 272 (388)
T ss_pred cChhhccCCEEEEEechhhcCCc----hhheeeeecCHHHHHHHHHHH--------------HHhccCCChHHHH----H
Confidence 11123344554 56888988643 678999998876554332100 0001111111111 1
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH-HHCCcc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFH 821 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L-~~~Gi~ 821 (946)
+..++..-+.+-+++..+...++.+++.+.|++. +.+.. .+.+..+ ++++++........+..+++++| .++|+.
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~ 349 (388)
T PRK07337 273 ALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPV-MPDGAFY--VYADCRGVAHPAAGDSAALTQAMLHDAGVV 349 (388)
T ss_pred HHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCeeEE--EEEecccccCCCCCCHHHHHHHHHHhCCEE
Confidence 1111111111224444455556778888888774 22211 1222222 45666532111124677888775 478998
Q ss_pred cCC-CCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 822 GPT-MSWP---VPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 822 ~~~-~~~p---~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
+.. -.|. ..+++||++.. +.++++..++.|.+
T Consensus 350 v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~ 385 (388)
T PRK07337 350 LVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGK 385 (388)
T ss_pred EeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 632 2231 24799999974 45656655555544
No 301
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.62 E-value=8.4e-14 Score=160.00 Aligned_cols=295 Identities=15% Similarity=0.150 Sum_probs=180.7
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc-cccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+.+++.+.+|.+ .. .+..+.|+ ++. .++++.+. .++++|+++...++.+...+...|+
T Consensus 66 ~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l---~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~G~ 137 (383)
T TIGR03540 66 YEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGI---AHIPLAFV-----NPGDIVLVPDPGYPVYRIGTLFAGG 137 (383)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHH---HHHHHHhC-----CCCCEEEEeCCCCcchHHHHHhcCC
Confidence 3576677777777777666764 22 34444454 333 23333331 2568899999988777778889999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccc-cccc
Q 002263 591 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGL 664 (946)
Q Consensus 591 ~vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl 664 (946)
+++.+|++++ ..+|++++++++. +++++|++++| |.+|.+-+ .+++|+++|+++|+++++|.++..- ..+.
T Consensus 138 ~v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~ 214 (383)
T TIGR03540 138 EPYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY 214 (383)
T ss_pred EEEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC
Confidence 9999999754 4579999999886 68899999998 57998862 3899999999999999999986411 1111
Q ss_pred cCC--Cc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 665 TSP--GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 665 ~~p--g~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
..+ .. ..-.+++.++.|+|+. .|.++|++.+++++...+... + .....+.+ .
T Consensus 215 ~~~~~~~~~~~~~~~i~~~SfSK~~g~----~GlRiG~~i~~~~l~~~~~~~------------~--~~~~~~~~----~ 272 (383)
T TIGR03540 215 KAPSFLEVDGAKDVGIEFHSLSKTYNM----TGWRIGMAVGNADLIAGLGKV------------K--TNVDSGVF----Q 272 (383)
T ss_pred CCcCcccCCCcccCEEEEEecccccCC----ccceeeEEeCCHHHHHHHHHH------------H--HhcccCCC----h
Confidence 111 11 1123666778888853 367799998887665543210 0 00001111 1
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-H
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 817 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~ 817 (946)
....++..++. .+.+-+++..+...++.+++.+.|++. .+.+..+++.++ ++++++ .+.+..++.++|. +
T Consensus 273 ~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~--~~~~l~-----~~~~~~~~~~~ll~~ 343 (383)
T TIGR03540 273 AIQYAAIAALN-GPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFY--VWVPVP-----EGYTSAEFAARLLEE 343 (383)
T ss_pred HHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceE--EEEECC-----CCCCHHHHHHHHHHH
Confidence 11112222222 233445555555667788888999875 322222222221 345554 2467889999875 6
Q ss_pred CCcccCC-CCCCC--CCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 818 YGFHGPT-MSWPV--PGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 818 ~Gi~~~~-~~~p~--~~~lri~~t~~~t~~eid~~~~aL 853 (946)
+||.+.. ..|+. .+++||++. .+++++++.++.|
T Consensus 344 ~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l 380 (383)
T TIGR03540 344 TGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARI 380 (383)
T ss_pred CCEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHH
Confidence 8998643 23432 478999996 3455555544444
No 302
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.62 E-value=2e-14 Score=162.19 Aligned_cols=295 Identities=11% Similarity=0.049 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCH-HHHHHcCCEEE
Q 002263 519 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNP-ATAAMCGMKIV 593 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~-~~a~~~G~~vv 593 (946)
.+++.++++.++++++.+. +.+..++|+.+.++++..+. + +++++++.. ..+|... ..++..|+ ++
T Consensus 36 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~----~----~~~~~l~i~~G~fg~r~~~~a~~~g~-~~ 106 (349)
T TIGR01364 36 EAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL----A----EGKVADYIVTGAWSKKAAKEAKKYGV-VN 106 (349)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC----C----CCCeEEEEECCHHHHHHHHHHHHhCC-cE
Confidence 4678899999999999742 44666778877766654332 1 345555432 2222111 13677898 77
Q ss_pred EEcCCCCC----CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CC
Q 002263 594 SVGTDAKG----NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP 667 (946)
Q Consensus 594 ~v~~~~~g----~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~p 667 (946)
.+..++.+ .+|+++++ ++ ++++.|.+++- |.+|+.. + ++++.+|++++||+++. +++.. ..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~-~-----~l~~~~~~l~iVDavss--~g~~~id~ 173 (349)
T TIGR01364 107 VVASGKEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEF-R-----ELPDVKNAPLVADMSSN--ILSRPIDV 173 (349)
T ss_pred EEeccccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEec-c-----eecccCCCeEEEEcccc--ccCccCCH
Confidence 77765332 45666655 22 57788888875 5689986 3 66777899999999864 33321 12
Q ss_pred CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC---CCCCCCCCCCcccCccchhhHHHHH
Q 002263 668 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 668 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~---~~~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
.+ .|+++++.||+|+ | ||+|++++++++.+.++..... ..++. ..+....|+++ ..+.+.
T Consensus 174 ~~--~d~~~~ssqK~lg-P-----~Glg~l~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Tp~~--------~~i~al 236 (349)
T TIGR01364 174 SK--FGLIYAGAQKNIG-P-----AGLTVVIVRKDLLGRASRITPS-MLNYKIHAENDSMYNTPPT--------FAIYVS 236 (349)
T ss_pred HH--ccEEEEecccccC-C-----CceEEEEECHHHHhhcccCCCC-cchHHHHHhcCCCCCCCcH--------HHHHHH
Confidence 23 4699999999884 4 6899999998877655332111 01110 00000112222 122233
Q ss_pred HHHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 745 YTYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 745 ~a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~~~v--~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
.+.|.++-++ |+.++.++...+++++.++|++.-.+ ....++......+.|.++.. +. ..++.+.+.++|++
T Consensus 237 ~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~----~~-~~~~~~~~~~~Gi~ 311 (349)
T TIGR01364 237 GLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE----EL-EKRFLKEAEERGLV 311 (349)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh----hH-hHHHHHHHHHCCCc
Confidence 4556667777 69999999999999999999985222 11111111111133443310 11 25676788889996
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 822 ~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+..... ..+++|+++...+|++|||+|+++|+++.+
T Consensus 312 ~~~~~~-~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 312 SLKGHR-SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ccCCcc-ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 543321 247999999999999999999999998754
No 303
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=5.2e-14 Score=161.37 Aligned_cols=284 Identities=14% Similarity=0.152 Sum_probs=184.6
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.+|++..++..++|++. ++.++++.+. .++++|+++++.++.+...++..|++++.++.++++.
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~--~i~~~~~~~~-----~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 161 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADE--LIDLLMRCVL-----DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFS 161 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCC
Confidence 46888999999988766666666652 2333333332 2467899998876656666888999999999877788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCC----CccCCCEEEe
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADVCHL 677 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p----g~~GaDi~~~ 677 (946)
+|+++|++++. .+++++|++++|| .+|.+. +.+++.++++.. +++++|.++.. +.....+ ....-.+++.
T Consensus 162 ~d~~~l~~~~~--~~~~~~v~l~~P~NPTG~~~-~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~ 236 (380)
T PLN03026 162 LDVPRIVEAVE--THKPKLLFLTSPNNPDGSII-SDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLR 236 (380)
T ss_pred cCHHHHHHHHh--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEe
Confidence 99999999984 2678999999994 799998 799999999865 89999998631 1110011 1112346678
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
++.|.|++ .|.++|++..++++...+... +...+++ .....++.+.|. ..+-++
T Consensus 237 SfSK~~gl----aGlRiGy~~~~~~~i~~l~~~--------------~~~~~~~------~~~q~aa~~aL~--~~~~~~ 290 (380)
T PLN03026 237 TFSKRAGL----AGLRVGYGAFPLSIIEYLWRA--------------KQPYNVS------VAAEVAACAALS--NPKYLE 290 (380)
T ss_pred cchHhhcC----ccccceeeecCHHHHHHHHHh--------------cCCCCCC------HHHHHHHHHHhh--CHHHHH
Confidence 88898864 478999999887665443110 0001111 111111222222 112244
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEEE
Q 002263 758 EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLMI 835 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~~~~lri 835 (946)
+..+....+.+++.+.|+++ +...++. .+.+ +.++++ .+.+..++.++|.++||.+.... ....+++||
T Consensus 291 ~~~~~~~~~r~~l~~~L~~~~~~~~~p~-~~~f---~~~~~~-----~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRi 361 (380)
T PLN03026 291 DVKNALVEERERLFGLLKEVPFLEPYPS-DANF---ILCRVT-----SGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRV 361 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeECCC-CCeE---EEEECC-----CCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEE
Confidence 45555667778888888875 2111221 1222 345543 13567899999999999864332 224578999
Q ss_pred EcCCCCCHHHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALISI 856 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i 856 (946)
++. +.+++++|+++|+++
T Consensus 362 s~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 362 SVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ecC---CHHHHHHHHHHHHHh
Confidence 986 678999999999754
No 304
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=4.4e-14 Score=162.05 Aligned_cols=280 Identities=18% Similarity=0.168 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~ 596 (946)
...++++.++++.|.+.. +..++|..+..+ +++ .. +++++||++...|+.+.. .+...|++++.++
T Consensus 55 ~~~~le~~lA~l~g~~~~-v~~~sG~~ai~~---~l~-~l-----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 124 (390)
T PRK08064 55 TREALEDIIAELEGGTKG-FAFASGMAAIST---AFL-LL-----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVD 124 (390)
T ss_pred hHHHHHHHHHHHhCCCCe-EEECCHHHHHHH---HHH-Hh-----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 355788999999998753 455777654432 222 11 246889999888775433 2456899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
.+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|.++|+|++
T Consensus 125 ~~-----d~~~l~~~l~---~~tklV~l~~p~NptG~~~-dl~~I~~la~~~g~~vvvD~a~~~~--~~~~~~~~g~Div 193 (390)
T PRK08064 125 MT-----NLEEVAQNIK---PNTKLFYVETPSNPLLKVT-DIRGVVKLAKAIGCLTFVDNTFLTP--LLQKPLDLGADVV 193 (390)
T ss_pred CC-----CHHHHHHhcC---CCceEEEEECCCCCCcEec-cHHHHHHHHHHcCCEEEEECCCCcc--cccCchhhCCcEE
Confidence 73 7899999986 789999999995 799998 8999999999999999999986432 2345667899999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+.|+||+|+.|. |--.|++++++ ++.+.+.... ...+ .+. ....+|. ...|-+
T Consensus 194 v~S~tK~~~G~~---~~laG~~v~~~~~~~~~l~~~~-------------~~~g-~~~-------~~~~a~l--~~~gl~ 247 (390)
T PRK08064 194 LHSATKFLAGHS---DVLAGLAVVKDEELAQKLYFLQ-------------NSFG-AVL-------GVQDCWL--VLRGLK 247 (390)
T ss_pred EeecceeccCCc---cceeEEEEeCCHHHHHHHHHHH-------------HhcC-CCC-------CHHHHHH--HHcccC
Confidence 999999985221 11247676653 4443321000 0001 111 0112333 233333
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCC-c-----------eeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 755 GLTEASKIAILNANYMAKRLEKH---YPILFRGVNG-T-----------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~---~~v~~~~~~~-~-----------~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
-+..+.++...++..+++.|+++ ..+.|++-.+ + +.-.+.|++. +.+++.+.+...+
T Consensus 248 tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--------~~~~~~~f~~~l~ 319 (390)
T PRK08064 248 TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--------SEEAVRQFVSHVK 319 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC--------CHHHHHHHHHhCC
Confidence 45566677788899999999864 3444443111 0 1112233332 2334444444445
Q ss_pred cc-----cCC----------C---CCC--------C-CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 820 FH-----GPT----------M---SWP--------V-PGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 820 i~-----~~~----------~---~~p--------~-~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
+. .++ + ..| + .+.+|+|+...++++.|+.|.++|.+
T Consensus 320 l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 320 LPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred cceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 52 110 0 011 2 46899999987777777777777765
No 305
>PRK07777 aminotransferase; Validated
Probab=99.62 E-value=6.2e-14 Score=161.32 Aligned_cols=299 Identities=15% Similarity=0.118 Sum_probs=184.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCCc--c-c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDS--F-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~--~-~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+.+++.+.+|.+. . . +.+++|+++..+. +..+. .++++|+++...|+.+...+...|.
T Consensus 60 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~---~~~~~-----~~gd~vli~~p~y~~~~~~~~~~g~ 131 (387)
T PRK07777 60 GPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA---VLGLV-----EPGDEVLLIEPYYDSYAAVIAMAGA 131 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH---HHHhc-----CCCCEEEEeCCCchhhHHHHHHCCC
Confidence 35776777667777777778652 2 2 3444455454333 22221 2568899988888777777889999
Q ss_pred EEEEEcCCCC---CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc
Q 002263 591 KIVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG 663 (946)
Q Consensus 591 ~vv~v~~~~~---g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g 663 (946)
+++.++++++ +.+|+++|+++++ +++++|++++| |.+|.+- +++++|.++|+++|+++++|.++... ..+
T Consensus 132 ~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~ 208 (387)
T PRK07777 132 HRVPVPLVPDGRGFALDLDALRAAVT---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDG 208 (387)
T ss_pred EEEEeecCCccCCCcCCHHHHHHhcC---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCC
Confidence 9999998764 4699999999986 67889999998 4688874 25999999999999999999876311 101
Q ss_pred -----ccC-CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 664 -----LTS-PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 664 -----l~~-pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
+.. ++..+.++++.+++|+|+.| |-++|++.+++++...+.... .......++
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~~~~~~------------~~~~~~~~~----- 267 (387)
T PRK07777 209 ARHLPLATLPGMRERTVTISSAAKTFNVT----GWKIGWACGPAPLIAAVRAAK------------QYLTYVGGA----- 267 (387)
T ss_pred CCcccHhhCCCCcCcEEEEeechhhccCc----CceeEEEecCHHHHHHHHHHH------------hhcccCCCC-----
Confidence 111 12234578889999998644 567899998876654332100 000001111
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
.. ..++..++. .+.+-+++..+...++.+++.+.|++. +.+ ++ +++.++ ++++++... ..+..++++.|.
T Consensus 268 ~~-q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-~~g~~~--~~~~~~~~~---~~~~~~~~~~l~ 338 (387)
T PRK07777 268 PF-QPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAGFEV-HD-SAGTYF--LCADPRPLG---YDDGTEFCRALP 338 (387)
T ss_pred HH-HHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCc-cC-CCcceE--EEecccccC---CCCHHHHHHHHH
Confidence 11 111112222 233334445555667888899999874 333 22 223222 334543211 236789999997
Q ss_pred -HCCcccC-CCCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 817 -DYGFHGP-TMSWP-----VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 817 -~~Gi~~~-~~~~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
++|+.+. .-.|. ..+.+||++.. +++++++.++.|.++
T Consensus 339 ~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~ 383 (387)
T PRK07777 339 ERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRAL 383 (387)
T ss_pred HhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 5799753 22221 13689999864 577788777777654
No 306
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=2.3e-13 Score=159.05 Aligned_cols=297 Identities=14% Similarity=0.143 Sum_probs=187.1
Q ss_pred HHHHHHHHHHhhCCC-----cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-----
Q 002263 522 FNNLGEWLCTITGFD-----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM----- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~-----~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~----- 590 (946)
..++.+.|++++..+ .+.+..++||.++++++..+|.|. +|++|| +..++||....+..+.|-
T Consensus 108 ~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~t------gr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 108 KDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTAT------GRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred HHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhh------CCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 345667777776422 222444799999988888888752 345666 567899988777654331
Q ss_pred -------EEEEEcCCCCCC------------CCHHHHHHHHHhcC---CCeEEEEEeCC-Cccccccc---CHHHHHHHH
Q 002263 591 -------KIVSVGTDAKGN------------INIEELRKAAEANR---DNLSTLMVTYP-STHGVYEE---GIDEICKII 644 (946)
Q Consensus 591 -------~vv~v~~~~~g~------------~D~e~L~~~i~~~~---~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia 644 (946)
.+..+|.....+ .+++.+++.+++.. +++++|++..- ...|++.+ .++++.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 234555422111 23678888887432 36888888643 34566642 499999999
Q ss_pred HHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 645 HDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 645 ~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
++||+++|+|.+ +.||.+.|.+ | +|++++ .|.++ +| -.+|.+..++++ ..+....
T Consensus 262 ~~~giLlI~DEV----~tGfGRtG~~~a~e~~gv~PDiv~~--gKglg----gG-~PlsAv~~~~~~-~~~~~~~----- 324 (464)
T PRK06938 262 EEAGIPLIVDEI----QSGFGRTGKMFAFEHAGIIPDVVVL--SKAIG----GS-LPLAVVVYREWL-DTWQPGA----- 324 (464)
T ss_pred HHcCCEEEEecc----ccCCCcCcHHHHHHhcCCCCCEEEe--ecccc----CC-CceEEEeehhHh-hccCCCC-----
Confidence 999999999986 5677777643 2 699987 48763 34 447777777664 3221100
Q ss_pred CCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceee
Q 002263 717 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAH 791 (946)
Q Consensus 717 d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~ 791 (946)
..+.+.|+.+.++++.+.|..+.++++.+. .....++|.++|+++ +.+. ..|. |.. .
T Consensus 325 -------------~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~---~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Glm-~ 386 (464)
T PRK06938 325 -------------HAGTFRGNQMAMAAGSATLRYIKEHRLAEH---AAAMGERLREHLRQLQRDYPQLGDVRGR-GLM-L 386 (464)
T ss_pred -------------CCCCCCcCHHHHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHhCCCeeeeecc-ceE-E
Confidence 011134567778888899998877765544 345677888888764 3322 2231 322 1
Q ss_pred eEEEecccccc----cC--C-CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 792 EFIVDLRGLKN----TA--G-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 792 e~v~~~~~~~~----~~--g-~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
-+-+..+..+. .. . .....+.+.+.++|+.+.... +..++||+.|+..+|++|||++++++.+++.++
T Consensus 387 gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 387 GVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG-RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred EEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 12221110000 00 0 013467788889999864322 124789999999999999999999999998764
No 307
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=9.3e-14 Score=158.44 Aligned_cols=272 Identities=19% Similarity=0.174 Sum_probs=181.5
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|.+ ++.++.+|++++.++++++ .. +||+|+++...|+.+...+....+..|++++.+|. ++
T Consensus 56 ~~Le~~lA~leg~e--~ivvt~gg~~Ai~~~l~al-l~--~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 130 (388)
T PRK08861 56 GLLEQTLSELESGK--GAVVTNCGTSALNLWVSAL-LG--PDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA 130 (388)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-cC--CCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 34668999999964 5889999999888887776 33 89999999999998888776656667899998875 44
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +..+.+....|-++|||++++|+ |++++|.+
T Consensus 131 l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvD-ea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d--- 206 (388)
T PRK08861 131 LDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVD-NTFLTPVLQKPLELGADFVIHSTTKYINGHSD--- 206 (388)
T ss_pred HHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCccccccCCCcccCCCEEEeecceeccCCCc---
Confidence 555 7789999999999 67999999999999999999999994 34555555677789999999999 77654321
Q ss_pred CceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
--+|++.+++ ++.+++. ..|..-|. .. +++ ..|+...|-+-|.-.
T Consensus 207 ~~gG~i~~~~~~~~~~~~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~Tl~lR 252 (388)
T PRK08861 207 VIGGVLITKTKEHAEELA-------------------------WWGNCIGA--TG--TPF-----DSYMTLRGIRTLGAR 252 (388)
T ss_pred ceeEEEEecHHHHHHHHH-------------------------HHHhccCC--CC--ChH-----HHHHHHhcCCCHHHH
Confidence 1146766654 3332220 00111110 10 111 123455566666667
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC----HHHHHHHHHH--cCCeee---
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR--- 388 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~--~GI~~~--- 388 (946)
.+|..++|..+++.|++.+.++ |..+ + +..-|+|.+.+ +..+.+.|.= .+..+.
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 332 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAESLGGVE 332 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccCCCCCc
Confidence 7788899999999999875343 3211 1 11246776653 3344444432 122210
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+ +.++.||+|++.-+.++=|++|.++|.
T Consensus 333 sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~ 382 (388)
T PRK08861 333 SLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFA 382 (388)
T ss_pred ceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 124679999998765555566666665
No 308
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=1.2e-13 Score=158.28 Aligned_cols=273 Identities=19% Similarity=0.193 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---c
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 177 (946)
..++++.+|++.|.+. +..+.+|++++.+++.++ .. +||+||++...|+++...+...++.+|++++.++. +
T Consensus 63 ~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e 137 (388)
T PRK07811 63 RTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAV-LR--PGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLD 137 (388)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHH
Confidence 4567899999999876 556678888888777666 33 89999999999998888776666678999999876 4
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +..+.+....|.++|+|++++|. |.|++|-
T Consensus 138 ~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD-~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~--- 213 (388)
T PRK07811 138 AVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVD-NTFASPYLQQPLALGADVVVHSTTKYIGGHS--- 213 (388)
T ss_pred HHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCcEEEecCceeecCCC---
Confidence 4555 7789999999998 67999999999999999999999995 34455554566678999999998 7775321
Q ss_pred CCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
+=-+|++++++ ++.+++.. .+...|. .. +++ .+ |+...+-+-+..
T Consensus 214 ~~~gG~vv~~~~~l~~~~~~-------------------------~~~~~g~--~~--s~~---~a--~l~~~~L~tl~~ 259 (388)
T PRK07811 214 DVVGGALVTNDEELDEAFAF-------------------------LQNGAGA--VP--GPF---DA--YLTLRGLKTLAV 259 (388)
T ss_pred CcEEEEEEECCHHHHHHHHH-------------------------HHHhcCC--CC--CHH---HH--HHHHhccCcHHH
Confidence 10157777764 34333210 0000010 00 111 11 123333344555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEc-CC-----C-----------CcCeEEEecCC----HHHHHHHHHH--cCCeee--
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVEVQ-GL-----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR-- 388 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~~~-~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~--~GI~~~-- 388 (946)
..++..+++..+++.|++..+++-+ .+ + +..-|+|.+++ +.++.+.|.= .+..+.
T Consensus 260 R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~ 339 (388)
T PRK07811 260 RMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGV 339 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCC
Confidence 6666778999999999988436432 11 1 11246777653 3344444432 122211
Q ss_pred ------e--------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 ------V--------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 ------~--------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+ +.++.||+|++.-+.++=+++|.++|.
T Consensus 340 ~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 387 (388)
T PRK07811 340 ESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLADLEQALG 387 (388)
T ss_pred cceEeCCcccCcccCCHhhcCCCCCEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 114679999998766555677777664
No 309
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=6.2e-14 Score=159.67 Aligned_cols=281 Identities=14% Similarity=0.137 Sum_probs=179.1
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.++.+...+..++|++.. ..++++.+. .++++|+++...++.+...+...|.+++.+|++ ++.
T Consensus 67 ~~lr~~ia~~~~~~~~~i~~t~G~~~~--l~~~~~~~~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~ 138 (359)
T PRK03158 67 PELRTKVAKHLGVDEEQLLFGAGLDEV--IQMISRALL-----NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGG 138 (359)
T ss_pred HHHHHHHHHHhCCCHHHEEECCCHHHH--HHHHHHHHh-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCC
Confidence 457788888888876555555565432 223344432 246789998876555555678899999999997 677
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHH--cCCEEEEeccccccc-ccc-cCC----CccCCC
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ-VGL-TSP----GYIGAD 673 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a~-~gl-~~p----g~~GaD 673 (946)
+|+++++++++ ++++++++++| |.+|.+- +.++|.++++. +|+++++|.++.... .+. ..+ ...+-.
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 139 HDLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred cCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 99999999886 68888999999 5799998 68888888877 599999999864211 111 011 112334
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+++.++.|+|+.| |.++|++.+++++.+.+... ..+ .+.+ .....++..++. ..
T Consensus 215 i~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~--------------~~~--~~~~----~~~q~~~~~~l~--~~ 268 (359)
T PRK03158 215 IVLRTFSKAYGLA----ALRVGYGIASEELIEKLNIA--------------RPP--FNTT----RIAQYAAIAALE--DQ 268 (359)
T ss_pred EEEEechHhhcCc----chhhehhcCCHHHHHHHHHh--------------cCC--CCCC----HHHHHHHHHHhc--CH
Confidence 6667888988533 67789999887665443110 001 1111 212222333332 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCCCC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPG 831 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p~~~ 831 (946)
+-+++..+....+.+++.+.|++. +.+ ++ +.+.+ +.+++. .+..++.++|.++|+.+.. ..|..++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~g~~---i~~~~~-------~~~~~~~~~l~~~gv~v~~g~~f~~~~ 336 (359)
T PRK03158 269 AFLKECVEKNAEGLEQYYAFCKEYGLFY-YP-SQTNF---IFVDTG-------RDANELFEALLKKGYIVRSGAALGFPT 336 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCee-CC-CcCcE---EEEECC-------CCHHHHHHHHHHCCeEEeeCCCCCCCC
Confidence 223344444455666777777764 322 22 22322 334442 3578899999999998643 2233468
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
++||++. +.+|+++|+++|+++
T Consensus 337 ~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 337 GVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred eEEEecC---CHHHHHHHHHHHHHh
Confidence 9999975 789999999999875
No 310
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.62 E-value=1.2e-13 Score=143.81 Aligned_cols=308 Identities=15% Similarity=0.141 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~ 591 (946)
..+++.++.+-+..+|...+ ..+.+++|..|-++++. +.. . ++|+||+-.. |.... -++..|++
T Consensus 48 ~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~---N~l-e----Pgd~vLv~~~--G~wg~ra~D~~~r~ga~ 117 (385)
T KOG2862|consen 48 FVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALV---NLL-E----PGDNVLVVST--GTWGQRAADCARRYGAE 117 (385)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHH---hhc-C----CCCeEEEEEe--chHHHHHHHHHHhhCce
Confidence 34677888888888887654 24566777777665543 221 2 5678886433 33333 26678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 669 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~ 669 (946)
|..|+.+....+.++.+++++.+| +..+|++++. +.+|+.++-++.+.++||+|+++++||++. ++++.. ...+
T Consensus 118 V~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~Va--Slggt~F~mDe 193 (385)
T KOG2862|consen 118 VDVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVA--SLGGTEFEMDE 193 (385)
T ss_pred eeEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechh--hcCCccceehh
Confidence 999988777789999999999975 4556888887 468999933778889999999999999863 455532 3357
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCc---cccCCCC---CC----CC---CCCCCCCcccCccc
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP---VVSTGGI---PA----PE---KSQPLGTIAAAPWG 736 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~---v~~~~d~---~~----~~---~~~~~~~i~~~~~g 736 (946)
||.|+.....+|.++.| ||+++|+.+++....+..+. +....|+ +. .+ .-..|.++.
T Consensus 194 wgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~----- 263 (385)
T KOG2862|consen 194 WGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQ----- 263 (385)
T ss_pred hcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHH-----
Confidence 99999988889999755 68889998876554443221 1111111 11 00 001122221
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccC--CCceeeeEEEecccccccCCCCHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAK 813 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~--~~~~~~e~v~~~~~~~~~~g~~~~~i~~ 813 (946)
.+-.--+.|+.+-+||+.+..+++.+++++++..|++. ++.....+ ..+..+. +.+ ..++|..+|+.
T Consensus 264 ---lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvtt--v~v-----p~gvDw~dVv~ 333 (385)
T KOG2862|consen 264 ---LLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTT--VKV-----PYGVDWKDVVA 333 (385)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCccee--eec-----CCCCCHHHHHH
Confidence 11122345777889999999999999999999999984 55422221 1123222 222 25889999999
Q ss_pred HHHHC-CcccCCCCCC-CCCEEEEEcCCCC-CHHHHHHHHHHHHHHHHH
Q 002263 814 RLMDY-GFHGPTMSWP-VPGTLMIEPTESE-SKEELDRYCDALISIREE 859 (946)
Q Consensus 814 ~L~~~-Gi~~~~~~~p-~~~~lri~~t~~~-t~~eid~~~~aL~~i~~e 859 (946)
+++++ ++.+...--| ++..+||..+-.+ +.+-||..++.|+..+.+
T Consensus 334 ~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 334 YAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred HHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 99976 5554332223 4578999887544 567789988888877654
No 311
>PRK09105 putative aminotransferase; Provisional
Probab=99.62 E-value=9.9e-14 Score=158.44 Aligned_cols=280 Identities=15% Similarity=0.187 Sum_probs=183.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
..++++.+++.+|.+...+..+.|++. +..++++.+. .++++|++++..|+.+...+.+.|.+++.++.++++
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~--ai~~~~~~l~-----~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSE--PLNYAVLAFT-----SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHH--HHHHHHHHHc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCC
Confidence 446778889999988766666666542 3334444442 246889999998888878899999999999998888
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHH--cCCEEEEecccccccccccCCC---ccCCCEE
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG---YIGADVC 675 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a~~gl~~pg---~~GaDi~ 675 (946)
.+|++++++. . ++++++++++| |.+|.+. +.++|.++++. +|+++++|.++.. +....... +.+.+++
T Consensus 153 ~~d~~~l~~~-~---~~~~~v~l~nP~NPTG~~~-~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 153 AHDVKAMLAA-D---PNAGLIYICNPNNPTGTVT-PRADIEWLLANKPAGSVLLVDEAYIH-FSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCHHHHHhc-C---CCCCEEEEeCCCCCCCcCc-CHHHHHHHHHhCCCCcEEEEECchHH-hccCcchHHHHhhCCCEE
Confidence 8999999876 2 56888999999 5799987 57777776653 4899999998732 22211111 1234555
Q ss_pred E-eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 676 H-LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 676 ~-~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+ .++.|+|+.| |.++|++++++++.+.+-.. ...+.+ .....++.+++. .++
T Consensus 227 ~~~SfSK~~g~~----GlRiG~~v~~~~~i~~l~~~---------------~~~~~~------~~~~~aa~~~L~--~~~ 279 (370)
T PRK09105 227 VLRTFSKLYGMA----GMRLGLAAARPDLLAKLARF---------------GHNPLP------VPAAAAGLASLR--DPK 279 (370)
T ss_pred EEecccHhhcCC----ccceeeeecCHHHHHHHHhc---------------CCCCcC------HHHHHHHHHHHh--CHH
Confidence 4 5778888543 67799999887665443100 001111 111112222222 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-CCCE
Q 002263 755 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGT 832 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p-~~~~ 832 (946)
-+++..++...+.+++.+.|++. +.+. .+.+.+ ++++++ .+..++.++|.++||.++.. |+ .+++
T Consensus 280 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~~f---~~~~~~-------~~~~~l~~~L~~~gI~v~~~-~~~~~~~ 346 (370)
T PRK09105 280 LVPQRRAENAAVREDTIAWLKKKGYKCT--PSQANC---FMVDVK-------RPAKAVADAMAKQGVFIGRS-WPIWPNW 346 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCcC--CCCCcE---EEEeCC-------CCHHHHHHHHHHCCcEEecC-CCCCCCe
Confidence 34444455667778888888874 3332 122322 334442 35689999999999987432 33 3589
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 833 LMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 833 lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+||++. +.+++++|+++|+++.
T Consensus 347 ~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 347 VRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EEEEcC---CHHHHHHHHHHHHHHh
Confidence 999985 5789999999998764
No 312
>PRK07480 putative aminotransferase; Validated
Probab=99.62 E-value=2.1e-13 Score=159.10 Aligned_cols=343 Identities=18% Similarity=0.213 Sum_probs=205.8
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..+|+|.+.+..++..+.. ...+.. .+ .+...+...++.+.|+++++.+. -.++.++|+.++++++..+|.
T Consensus 62 ~~lGh~~p~v~~Ai~~q~~-~~~~~~--~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~ 133 (456)
T PRK07480 62 VNVGYGRKELADAAARQMR-ELPYYN--TF-----FKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRH 133 (456)
T ss_pred hcCCCCCHHHHHHHHHHHH-hcCCcc--cc-----cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 3567777666666555532 111111 00 00112345578888988885321 236678999999999999999
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE------------EEEEcCCCCC----CCC--------HHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKG----NIN--------IEELRKAAE 613 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~------------vv~v~~~~~g----~~D--------~e~L~~~i~ 613 (946)
|...+|.++|.+|| ...++||..-.+....|.. +..++..... ..+ +++|++.+.
T Consensus 134 ~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (456)
T PRK07480 134 YWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKIL 213 (456)
T ss_pred HHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87666655566777 4678999876554433321 2223321100 011 366665554
Q ss_pred h-cCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCC
Q 002263 614 A-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLH 680 (946)
Q Consensus 614 ~-~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~h 680 (946)
+ ..+++++|++..- ...|++.+ .+++|.++|++||+++|+|.+ +.||.+.|.+ | +|++++ .
T Consensus 214 ~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--g 287 (456)
T PRK07480 214 ELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEV----ICGFGRTGEWFGSQHFGIKPDLMTI--A 287 (456)
T ss_pred hcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hhCCCcCcchhhhhhcCCCCCeeee--e
Confidence 3 3467888888754 34577653 399999999999999999986 4566666643 2 688877 4
Q ss_pred cccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHH
Q 002263 681 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 760 (946)
Q Consensus 681 K~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~ 760 (946)
|.++ +|--.+|.+++++++.+.+.... + .....+ .+.|+++.++++.+.|..+-++++.+.+
T Consensus 288 K~l~----gG~~Pi~av~~~~~i~~~~~~~~-~------------~~~~~~-T~~gnpl~~Aaa~a~L~~l~~~~l~~~~ 349 (456)
T PRK07480 288 KGLT----SGYIPMGAVGVGDRVAEVLIEEG-G------------EFNHGF-TYSGHPVAAAVALANLRILRDEGIVERV 349 (456)
T ss_pred hhhc----cCCccceEEEEcHHHHHHHhcCC-C------------CcccCC-CCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 8773 33224677777877665441100 0 000001 1345777888889999988777665543
Q ss_pred HHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEecccccccC--C--CCHHHHHHHHHHCCcccCCCCCCCCCE
Q 002263 761 KIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTA--G--IEPEDVAKRLMDYGFHGPTMSWPVPGT 832 (946)
Q Consensus 761 ~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~~~~~~--g--~~~~~i~~~L~~~Gi~~~~~~~p~~~~ 832 (946)
+ ....++|.++|++. +.++ +.|. |... -+-+..+.-.... . .....+.+++.++|+.+... .+.
T Consensus 350 ~--~~~g~~l~~~l~~l~~~~~i~~vrG~-Glm~-gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~ 421 (456)
T PRK07480 350 R--DDTGPYLQKRLRELADHPLVGEVRGV-GLVG-AIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV----GDR 421 (456)
T ss_pred H--HHHHHHHHHHHHHhhcCCCeeeEEee-cceE-EEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec----CCE
Confidence 1 24566777777653 2221 2232 3221 1222111000000 0 01246778889999987532 478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 833 LMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 833 lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+++.|+...|++|||+++++|.+++.++.+
T Consensus 422 l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 422 MIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988754
No 313
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.62 E-value=3.1e-13 Score=157.28 Aligned_cols=314 Identities=15% Similarity=0.130 Sum_probs=181.1
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+-.|.+ ...+..++| +++. .++++.+. .++++|++++..++.+...+.+.|++
T Consensus 93 ~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al---~l~~~~l~-----~~Gd~Vlv~~P~y~~y~~~~~~~g~~ 164 (430)
T PLN00145 93 CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI---EIIMSVLA-----QPGANILLPRPGYPLYEARAVFSGLE 164 (430)
T ss_pred CccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH---HHHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCE
Confidence 3576565555555554444443 333444444 4443 33344332 25688999999877777778899999
Q ss_pred EEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccc-cccc--
Q 002263 592 IVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG-- 663 (946)
Q Consensus 592 vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~-a~~g-- 663 (946)
++.+++.+ ++.+|+++|+++++ ++++++++++|| .+|.+.+ .+++|+++|+++|+++++|.++.. .+.+
T Consensus 165 ~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~ 241 (430)
T PLN00145 165 VRHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKP 241 (430)
T ss_pred EEEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCC
Confidence 99998743 46899999999986 789999999995 7899862 489999999999999999998632 1111
Q ss_pred ccCCCccC---CCEEEeCCCcccccCCCCCCCcceeEEEec--ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 664 LTSPGYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 664 l~~pg~~G---aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~--~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
+.+...++ .=+++.++.|+|++| |.++|++++.. .+..... .+..- ........+++...|.
T Consensus 242 ~~~~~~~~~~~~vi~~~S~SK~~~~p----G~RlG~iv~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~Q~ 308 (430)
T PLN00145 242 FVPMGVFGEVAPVLTLGSISKRWVVP----GWRLGWIATCDPNGILKETK--VVDSI-------RNYLNISTDPATFVQG 308 (430)
T ss_pred ccchhhhcccCcEEEEeccccccCCC----CeeEEEEEEecchhhhhhhH--HHHHH-------HHHhcccCCCCHHHHH
Confidence 11111221 125567788988765 79999998742 2221100 00000 0000011111111111
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeee-ccCCCceeeeEEEecccccccCCC-CHHHHHHHHH
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILF-RGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM 816 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~-~~~~~~~~~e~v~~~~~~~~~~g~-~~~~i~~~L~ 816 (946)
++..+|..-..+-+++..+....+++++.+.|+++..+.. ..+++.++ +.++++.-.. .+. +..+++.+|.
T Consensus 309 ----a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y--~~v~l~~~~~-~~~~~~~~~~~~ll 381 (430)
T PLN00145 309 ----AIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMF--VMVKLDLSCL-SGIKDDMDFCCKLA 381 (430)
T ss_pred ----HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeE--EEeccChhhc-CCCCCHHHHHHHHH
Confidence 1122222111233555566666778888899987522211 11233332 3444431000 012 4567776665
Q ss_pred -HCCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 817 -DYGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 817 -~~Gi~~-~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
++|+.+ +...|..++++||+++. +.++++..++.|.+.+++.+
T Consensus 382 ~~~gV~v~pG~~fg~~~~lRis~~~--~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 382 KEESVVVLPGSALGMKNWLRITFAI--DPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred HhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhc
Confidence 668874 43344446899999973 56667777777766665543
No 314
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.62 E-value=5.6e-14 Score=161.60 Aligned_cols=213 Identities=19% Similarity=0.188 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|++.|.+ ++.++.+|++++.++++++ +. +||+||+++..|+.+...+...++..|++++++|..
T Consensus 72 ~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~ 146 (403)
T PRK07810 72 VSMFEERLRLIEGAE--ACFATASGMSAVFTALGAL-LG--AGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLS 146 (403)
T ss_pred HHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHH-hC--CCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHH
Confidence 346778999999977 4788999999988877665 23 899999999999888777766667789999999864
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....+.++|+|+++.|+ |.|++ .|
T Consensus 147 ~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~~~~~gaDivv~S~tK~l~g---~g 222 (403)
T PRK07810 147 QWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLD-NVFATPLLQRGLPLGADVVVYSGTKHIDG---QG 222 (403)
T ss_pred HHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhcCCcEEEccCCceecC---Cc
Confidence 4555 7889999999998 68999999999999999999999994 34566655566788999999998 77753 12
Q ss_pred CCceEEEEEchhhhhc-CCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~~~~~~-lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
..-+|+++++++.+.. +. ..++..|. .+ ++ ..++ +...+-+-+..
T Consensus 223 ~~~gG~v~~~~~~~~~~l~-------------------------~~~~~~g~-~~---s~---~~a~--l~l~~L~tl~~ 268 (403)
T PRK07810 223 RVLGGAILGDREYIDGPVQ-------------------------KLMRHTGP-AL---SA---FNAW--VLLKGLETLAL 268 (403)
T ss_pred CceeEEEEeChHHHHHHHH-------------------------HHHHHhCC-CC---CH---HHHH--HHHhccCcHHH
Confidence 2225788887664421 10 00011111 00 11 1111 24445556667
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
..++..+++.++++.|++...++
T Consensus 269 R~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 269 RVRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 77778899999999999874343
No 315
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=9.8e-14 Score=159.33 Aligned_cols=274 Identities=19% Similarity=0.168 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+|++.|.+. +.++.+|++++.+++.++ +. +||+||++...|+++...++..++..|++++.+|.
T Consensus 65 ~~~~le~~lA~l~g~~~--~i~~ssG~~Ai~~~l~al-l~--~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~ 139 (398)
T PRK08249 65 TVQAFEEKVRILEGAEA--ATAFSTGMAAISNTLYTF-LK--PGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDH 139 (398)
T ss_pred HHHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHh-cC--CCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCH
Confidence 34567899999999765 678888888777766655 23 89999999999999988887666778999998775
Q ss_pred ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 177 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 177 ~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
+++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+. ..+.+....|..+|+|+++.|. |.++++
T Consensus 140 e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~-t~a~~~~~~~l~~~~Divv~S~sK~l~g~--- 215 (398)
T PRK08249 140 EQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDN-TFATPINQNPLALGADLVIHSATKFLSGH--- 215 (398)
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEEC-CcCccccCCchhhCCCEEeccCceecCCC---
Confidence 45555 7788999999988 789999999999999999999999943 3444433445678999999998 777532
Q ss_pred CCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 254 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 254 GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
|.-.+|++..++++.+++.. .++..+ .+.+++ .+. +...+.+-+..
T Consensus 216 ~~~~gG~vv~~~~l~~~l~~-------------------------~~~~~g----~~~s~~---~a~--l~l~~l~tL~~ 261 (398)
T PRK08249 216 ADALGGVVCGSKELMEQVYH-------------------------YREING----ATMDPM---SAY--LILRGMKTLKL 261 (398)
T ss_pred CCceEEEEECCHHHHHHHHH-------------------------HHHhcC----CCCCHH---HHH--HHHhCcchHHH
Confidence 11124777776666554410 001011 011121 111 23344455556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC----HHHHHHHHHH--cCCeee--
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR-- 388 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~--~GI~~~-- 388 (946)
..++..+++..+.+.|++.+.++ |..+ + +...|+|.+++ +.++.+.|.= .+..+.
T Consensus 262 R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~ 341 (398)
T PRK08249 262 RVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAV 341 (398)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCC
Confidence 66777899999999999875354 2211 1 11246676643 3344444431 122210
Q ss_pred -------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 -------------V----------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 -------------~----------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. +.++.||+|++.-+.++=|++|.++|.
T Consensus 342 ~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 392 (398)
T PRK08249 342 ETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFA 392 (398)
T ss_pred CceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 124679999998776666677777775
No 316
>PRK07036 hypothetical protein; Provisional
Probab=99.62 E-value=3.8e-13 Score=157.38 Aligned_cols=341 Identities=16% Similarity=0.201 Sum_probs=207.4
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
..+|++.+.+..++..+. ....+. +++.. -..+...++.+.|++++..+ ...++.++||.++++++..+|.
T Consensus 63 ~~lGh~~p~v~~Ai~~q~-~~~~~~--~~~~~-----~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~ 134 (466)
T PRK07036 63 VNVGYGREEMADAIADQA-RRLPYY--TPFGD-----MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHY 134 (466)
T ss_pred hcCCCCCHHHHHHHHHHH-HhCccc--ccccc-----cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHH
Confidence 356888777766666553 221111 11100 01123457788888887432 1246778999999999998898
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCC-----CCC-------CCHHHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDA-----KGN-------INIEELRKAAE 613 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~-----~g~-------~D~e~L~~~i~ 613 (946)
|...+|.++|.+|| ...++||....+....|- .+..++... .+. ..++.+++.+.
T Consensus 135 ~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 214 (466)
T PRK07036 135 YFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKIL 214 (466)
T ss_pred HHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87666755566777 567899988665443321 134444321 011 11345666665
Q ss_pred h-cCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc-------cC--CCEEEeCC
Q 002263 614 A-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-------IG--ADVCHLNL 679 (946)
Q Consensus 614 ~-~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~-------~G--aDi~~~s~ 679 (946)
. +.+++++|+++.. +..|++.+ .+++|.++|++||+++|+|.+ +.|+.+.|. +| +|++++
T Consensus 215 ~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~~~~~~~gv~PDivt~-- 288 (466)
T PRK07036 215 SLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEV----VTGFGRLGHFFASEAVFGIQPDIITF-- 288 (466)
T ss_pred HcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeec----hhCCCcCchhhhhhhhcCCCCCEEEE--
Confidence 3 3467888888754 34577653 399999999999999999986 456656552 23 688887
Q ss_pred CcccccCCCCCC-CcceeEEEecccCCCCCCC-ccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 680 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 680 hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~-~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
.|.++ || -.+|.+++++++.+.+... ..+ ..... .+.+.|+.+.++++.+.|..+.++++.
T Consensus 289 gK~l~-----gG~~Pi~av~~~~~i~~~~~~~~~~~-----------~~~~~-~~T~~gnpl~~aaa~a~Le~i~~~~l~ 351 (466)
T PRK07036 289 AKGLT-----SGYQPLGAVIISERLLDVISGPNAKG-----------NVFTH-GFTYSGHPVACAAALKNIEIMEREGLC 351 (466)
T ss_pred ccccc-----cCccccEEEEEcHHHHHHHhcccCcC-----------ccccc-CCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 48773 44 2477777887776544210 000 00000 111345677788888889888776655
Q ss_pred HHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEeccc--c-cccCCC---CHHHHHHHHHHCCcccCCCCC
Q 002263 758 EASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRG--L-KNTAGI---EPEDVAKRLMDYGFHGPTMSW 827 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~~~~--~-~~~~g~---~~~~i~~~L~~~Gi~~~~~~~ 827 (946)
+. .....++|.++|++. +.++ ..|. |.. +.+.+.. . +..... ....+.+.+.++|+.+..
T Consensus 352 ~~---~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~---~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~--- 421 (466)
T PRK07036 352 EH---VREVGPYFEERLASLRELPLVGDVRGD-HLM---ACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP--- 421 (466)
T ss_pred HH---HHHHHHHHHHHHHHhccCCCEEEEEee-ceE---EEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEee---
Confidence 43 446677888888653 2221 2221 222 1222211 0 000001 135678888999998742
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 828 PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 828 p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+.++++|+..+|++|||+++++|.++++++.+
T Consensus 422 -~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 422 -LEHLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred -cCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 2367999999999999999999999999887744
No 317
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.62 E-value=6.3e-14 Score=163.48 Aligned_cols=289 Identities=16% Similarity=0.204 Sum_probs=178.4
Q ss_pred HHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHH--c---------
Q 002263 522 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAM--C--------- 588 (946)
Q Consensus 522 ~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~--~--------- 588 (946)
..++.++|++++. ++.+ .+.++|+.++++++..+|.| ++|++|+ ...++||.+...... .
T Consensus 141 ~~~lAe~l~~~~p~~~~v-~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~ 213 (474)
T PLN02482 141 ENVLAEMVIDAVPSVEMV-RFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPD 213 (474)
T ss_pred HHHHHHHHHHhCCCCCEE-EEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchhhhhcCCCccccCCCC
Confidence 4477888888874 4433 56789998888888887776 2456676 567899976432211 1
Q ss_pred --CC------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecc
Q 002263 589 --GM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGA 656 (946)
Q Consensus 589 --G~------~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a 656 (946)
|+ .+..+|. .|+++|++.++++.+++++|++..- +..|.+.+ .+++|.++|++||+++++|.+
T Consensus 214 ~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV 288 (474)
T PLN02482 214 SPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEV 288 (474)
T ss_pred CCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 11 1222232 2799999999877677888877653 45677653 377999999999999999997
Q ss_pred cccccccccCCCc------cC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 657 NMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 657 ~~~a~~gl~~pg~------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
+ .|+ +.+. +| +|++++ .|.++ +| -.+|.+++++++++.+... + . .
T Consensus 289 ~----tGf-R~g~~ga~~~~gv~PDi~t~--gK~lg----gG-~Pigav~g~~ei~~~~~~~--~---------~----~ 341 (474)
T PLN02482 289 M----TGF-RIAYGGAQEYFGITPDLTTL--GKVIG----GG-LPVGAYGGRREIMEMVAPA--G---------P----M 341 (474)
T ss_pred c----cCe-ecCcchHhHHhCCCCCEEEe--cchhh----CC-CceEEEEEcHHHHHhhccC--C---------C----c
Confidence 5 344 3222 23 688776 48774 33 3466778887777655210 0 0 0
Q ss_pred CcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCceeeeEEEecccc---
Q 002263 729 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDLRGL--- 800 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-----~~v~~~~~~~~~~~e~v~~~~~~--- 800 (946)
...+.+.|+.+.++++.+.|..+..+++. ++...+.++|+++|++. +.+...+..+ .+. +.+...+.
T Consensus 342 ~~~~T~~gnpl~~aAala~L~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g-~~g-i~f~~~~~~~~ 416 (474)
T PLN02482 342 YQAGTLSGNPLAMTAGIHTLKRLQQPGTY---EYLDKITKKLIQGILEAGKKAGHEMCGGYISG-MFG-FFFTEGPVYNF 416 (474)
T ss_pred ccccCcchhHHHHHHHHHHHHHHhccCHH---HHHHHHHHHHHHHHHHHHHhcCCCEEEcccce-EEE-EEEecCCccCh
Confidence 01111335666777788888888765544 34456788898888764 1222111112 221 11211110
Q ss_pred ---cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 801 ---KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 801 ---~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.........+.+.|.++|+++....++. + .|+..+|++|||++++++.+++.+
T Consensus 417 ~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-~----~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 417 ADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA-G----FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred hhhccCCHHHHHHHHHHHHHCCeEEeccCCCC-C----cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 00000113468888999999875443332 1 267788999999999999998765
No 318
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=9.6e-14 Score=165.41 Aligned_cols=299 Identities=15% Similarity=0.099 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.+.+.|+.+++++|.+.+.+.+|++|+|+.+++++.. +++++||+++..|-|...++.+.|++.++++...+
T Consensus 196 ~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n 267 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAA--------PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRN 267 (713)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeeEEeccccc
Confidence 4779999999999999988889998989887777653 26789999999999999999999999999975432
Q ss_pred -----CCCCH-----HHHHHHHHhcCC--CeEEEEEeCCCcccccccCHHHHHHHHHHcCCEE-EEecccccccccccC-
Q 002263 601 -----GNINI-----EELRKAAEANRD--NLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQV-YMDGANMNAQVGLTS- 666 (946)
Q Consensus 601 -----g~~D~-----e~L~~~i~~~~~--~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll-~vD~a~~~a~~gl~~- 666 (946)
|.++. +.++++|+++.+ +.+++++|+|++.|++- |+++|.++| |+.+ +||.|+. +...|.+
T Consensus 268 ~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~y-d~~~I~~~~---g~~~ilvDEAhg-ah~~F~p~ 342 (713)
T PRK15399 268 ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLY-NTDWIKQTL---DVPSIHFDSAWV-PYTHFHPI 342 (713)
T ss_pred ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceee-CHHHHHHHh---CCCEEEEeccch-hhhhcCcc
Confidence 45666 999999987642 23689999999999998 899999999 6766 7999874 2222321
Q ss_pred -C--Cc--c--CCCEE---EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 667 -P--GY--I--GADVC---HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 667 -p--g~--~--GaDi~---~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
| .. . |+|.+ +.|.||+++. -...+.|-++.. +.-..+. +.-....+|||
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~a-----lTQaS~iHvk~~----vd~~~~n----------~a~~m~~STSP-- 401 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAA-----FSQASLIHIKGE----YDEETFN----------EAFMMHTSTSP-- 401 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccc-----cchheeeeecCC----CCHHHHH----------HHHHHHcCCCc--
Confidence 1 11 2 58888 8999999852 123345544321 1100000 00000112222
Q ss_pred hhhHHHHHHHHHHHHc-HhhHHHHHHHHHHHHHHHHHHHhccC--------Ceeec-------------cCC--------
Q 002263 737 SALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKRLEKHY--------PILFR-------------GVN-------- 786 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG-~eGl~~~~~~~~~~a~~l~~~L~~~~--------~v~~~-------------~~~-------- 786 (946)
+..+++..=...++|- +.| ++..+..+..+..++++|.+.. .+.-+ +.+
T Consensus 402 sY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~ 480 (713)
T PRK15399 402 SYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDAD 480 (713)
T ss_pred HHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccc
Confidence 3333322212222332 234 3455667777888888886532 22100 000
Q ss_pred ------CceeeeEEEeccccc-----ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 787 ------GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 787 ------~~~~~e~v~~~~~~~-----~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
+|. .+++.++.+. ...|+++..+++.|.++||.+...+ ...+.+.++...|++++++++++|.+
T Consensus 481 ~~~~~lDP~--KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---~~~vL~l~s~g~t~~~~~~L~~aL~~ 555 (713)
T PRK15399 481 ADHMFLDPV--KVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---PYNLLFLFSIGIDKTKAMGLLRGLTE 555 (713)
T ss_pred cccccCCCc--eEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 111 1233332110 0247889999999999999875443 36788888889999999999999998
Q ss_pred HHHH
Q 002263 856 IREE 859 (946)
Q Consensus 856 i~~e 859 (946)
+.+.
T Consensus 556 f~~~ 559 (713)
T PRK15399 556 FKRA 559 (713)
T ss_pred HHHh
Confidence 8443
No 319
>PRK08068 transaminase; Reviewed
Probab=99.61 E-value=1.1e-13 Score=159.21 Aligned_cols=293 Identities=12% Similarity=0.078 Sum_probs=178.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cc-cccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+-.|.+ .. .+..++|+ ++.. .+++.+. .++++|+++...++.+...+++.|++
T Consensus 70 ~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~ 141 (389)
T PRK08068 70 RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLV---ELPQCLM-----NPGDTILVPDPGYPDYLSGVALARAQ 141 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 576666666666666555743 33 34444444 4332 2333321 25688999999888888889999999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccccc
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT 665 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl~ 665 (946)
++.+|++++ ..+|++++++++. +++++|++++|| .+|.+- +.+++|.++|+++|+++++|.++.. ...+-.
T Consensus 142 ~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 142 FETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred EEEeecccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 999999753 4689999999986 678899999994 789886 2467888999999999999998631 111100
Q ss_pred C-C-----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 666 S-P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 666 ~-p-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
. + +...-.+++.++.|+|+.| |-++|++..++++...+... . ....++.+ ..
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~l~~~------------~--~~~~~~~~----~~ 276 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTFNMA----GWRVAFAVGNESVIEAINLL------------Q--DHLFVSLF----GA 276 (389)
T ss_pred CcChhhCCCccCCEEEEecchhccCCc----cceeEeEecCHHHHHHHHHH------------H--hhccCCCC----hH
Confidence 0 1 1111236677888988644 67899999887666543210 0 00011111 11
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD- 817 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~- 817 (946)
...++..++. -+.+-+++..+...++.+++.+.|++. +.+ + .+.+.++ ++++++. +.+..++++.|.+
T Consensus 277 ~q~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~-~-~~~g~~~--~~v~~~~-----~~~~~~~~~~l~~~ 346 (389)
T PRK08068 277 IQDAAIEALL-SDQSCVAELVARYESRRNAFISACREIGWEV-D-APKGSFF--AWMPVPK-----GYTSEQFADLLLEK 346 (389)
T ss_pred HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-c-CCCeeEE--EEEECCC-----CCCHHHHHHHHHHh
Confidence 1111122221 233445555666667788888888775 332 1 1222221 3456542 3578899999986
Q ss_pred CCcccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 818 YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 818 ~Gi~~~-~~~~p--~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
+||.+. ...|+ ..+++||++.. .++.+...++.|
T Consensus 347 ~gi~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l 383 (389)
T PRK08068 347 AHVAVAPGNGFGEHGEGYVRVGLLT--DEERLREAVERI 383 (389)
T ss_pred CCEEEecchHhCccCCCeEEEEEcC--CHHHHHHHHHHH
Confidence 699863 33333 24789999963 344444444444
No 320
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.61 E-value=5.2e-13 Score=154.41 Aligned_cols=297 Identities=15% Similarity=0.228 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHh-cCC-CCCCEEE-EcCCCCCCCHHHHHHcCCEEEE---
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGMKIVS--- 594 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~-~G~-~~~~~Il-i~~saHg~~~~~a~~~G~~vv~--- 594 (946)
...++++.+++++|++.+ ++.++|+.++++++..+|.|+.. +|. ..+++|+ .....||.........+-....
T Consensus 74 ~~~~~~~~l~~~~~~~~~-~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~ 152 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDKV-LPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF 152 (400)
T ss_pred HHHHHHHHHHhCCCCCEE-EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC
Confidence 466888999999988754 56788999998888877765322 222 1234555 5677899887765544321110
Q ss_pred EcCCCC----CCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEecccccccccccC
Q 002263 595 VGTDAK----GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTS 666 (946)
Q Consensus 595 v~~~~~----g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~ 666 (946)
.+..++ ...|+++|+++++ .+++++|+++.+ |.+|++.++ +++|.++|++||+++++|+++. ++.+
T Consensus 153 ~~~~~~~~~~~~~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~----g~g~ 226 (400)
T PTZ00125 153 GPFVPGFELVDYNDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT----GLGR 226 (400)
T ss_pred CCCCCCceEeCCCCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc----CCCc
Confidence 011000 1248999999995 367999988766 568887632 9999999999999999999763 2222
Q ss_pred CC------cc--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 667 PG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 667 pg------~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
.| .+ .+|+++++ |+|+ +|++++|++++++++...+..... . ...+ ++.
T Consensus 227 ~G~~~~~~~~~~~pd~~~~s--K~l~----~g~~~ig~v~~~~~~~~~~~~~~~------------~--~t~~----~~~ 282 (400)
T PTZ00125 227 TGKLLAHDHEGVKPDIVLLG--KALS----GGLYPISAVLANDDVMLVIKPGEH------------G--STYG----GNP 282 (400)
T ss_pred cchhhHHHhcCCCCCEEEEc--cccc----CCCcCcEEEEEcHHHHhhccCCCC------------C--CCCC----cCH
Confidence 11 12 35888764 9884 455679999999887665432100 0 1111 123
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHHHH
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 813 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~ 813 (946)
...+++.+.+..+..+++.+.. ..+.++++++|++. .... ..+ .+.+ +.+.++. ..+.+..++.+
T Consensus 283 ~~~~aa~~~l~~i~~~~~~~~~---~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~---~~v~~~~---~~~~~~~~~~~ 352 (400)
T PTZ00125 283 LACAVAVEALEVLKEEKLAENA---QRLGEVFRDGLKELLKKSPWVKEIRG-KGLL---NAIVFDH---SDGVNAWDLCL 352 (400)
T ss_pred HHHHHHHHHHHHHHhcCHHHHH---HHHHHHHHHHHHHHHhcCCCeEEEec-ccEE---EEEEEcc---CcchHHHHHHH
Confidence 3344455556666555554433 34567777777663 1211 111 2322 2232221 01245678999
Q ss_pred HHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 814 RLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 814 ~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+|.++|+.+.... .+.+||+++...+++|++++++.|.++++++.
T Consensus 353 ~l~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 353 KLKENGLLAKPTH---DNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHCCeEEeecC---CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9999998864221 47899999988999999999999999887764
No 321
>PRK09148 aminotransferase; Validated
Probab=99.61 E-value=1.9e-13 Score=158.16 Aligned_cols=309 Identities=13% Similarity=0.101 Sum_probs=186.5
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+.+|.+ .. .+..++|++. +..++++.+. .+++.|++++..+..+...+...|.+
T Consensus 67 ~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~ 139 (405)
T PRK09148 67 SKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE--GFANMAQAIT-----APGDVILCPNPSYPIHAFGFIMAGGV 139 (405)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHhc-----CCCCEEEEcCCCCcccHHHHHhcCCE
Confidence 3677777777777776666754 33 4555566542 2233333332 24688999999888887788899999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccc-cc--cc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG--LT 665 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~g--l~ 665 (946)
++.++.+.++. ++++++++++++.+++++|++++| |.+|.+-+ .+++|.++|+++|+++++|.++..-. .+ +.
T Consensus 140 v~~v~~~~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 218 (405)
T PRK09148 140 IRSVPAEPDEE-FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPP 218 (405)
T ss_pred EEEEeCCCCCC-CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCC
Confidence 99999876542 456677777655578999999999 57898862 36789999999999999999864211 11 11
Q ss_pred CCCcc----CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 666 SPGYI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 666 ~pg~~----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
....+ +..+++.+++|+|+.| |.++|++.+++++...+... +...+.+.+ ...-
T Consensus 219 s~~~~~~~~~~~i~~~SfSK~~~~p----GlR~G~~v~~~~~i~~l~~~--------------~~~~~~~~~----~~~q 276 (405)
T PRK09148 219 SVLQVPGAKDVTVEFTSMSKTFSMA----GWRMGFAVGNERLIAALTRV--------------KSYLDYGAF----TPIQ 276 (405)
T ss_pred ChhhCCCccCcEEEEeccccccCCc----chheeeeeCCHHHHHHHHHH--------------HHHhccCCC----hHHH
Confidence 11111 2235578889998655 67899999887665443210 000011111 1111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
.++...+. .+.+-+++..+...++.+++.+.|++. +.+ ..+.+..+ +.++++... .+.+..++++.|. ++|
T Consensus 277 ~~~~~~L~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~p~~g~f--~~~~l~~~~--~~~~~~~~~~~ll~~~g 349 (405)
T PRK09148 277 VAATAALN-GPQDCIAEMRELYKKRRDVLVESFGRAGWDI--PPPAASMF--AWAPIPEAF--RHLGSLEFSKLLVEKAD 349 (405)
T ss_pred HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHcCCcc--CCCCeeEE--EEEECCCcc--CCCCHHHHHHHHHHhCC
Confidence 11222222 123334455556667788888888874 332 11222222 445654210 1234678888876 689
Q ss_pred cccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 820 i~~~-~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.+. ...|+ ..+++||++. .+.+++++.++.|.+++++..+
T Consensus 350 V~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 350 VAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Confidence 9753 33343 2478999986 3566777777777666655444
No 322
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=5.9e-14 Score=162.15 Aligned_cols=141 Identities=23% Similarity=0.211 Sum_probs=116.2
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec-cc---
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-LK--- 177 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~-~~--- 177 (946)
.++++.+|++.|.+. +.++.+|++|+.++++++ .. +||+||++...|..+...+...++..|++++.++ .+
T Consensus 72 ~~Le~~lA~l~g~~~--av~~sSG~aAi~~al~al-l~--~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e 146 (436)
T PRK07812 72 DVVEQRIAALEGGVA--ALLLASGQAAETFAILNL-AG--AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLD 146 (436)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHH-hC--CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHH
Confidence 356789999999876 788899999988887766 23 8999999999999888777655567899999985 43
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-cccc
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 248 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg 248 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|++ .++.+.+..|.++|+|+++.|+ |.++
T Consensus 147 ~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~-t~a~~~~~~pl~~GaDivv~S~tK~lg 219 (436)
T PRK07812 147 AWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDN-TIATPYLIRPLEHGADIVVHSATKYLG 219 (436)
T ss_pred HHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC-CCcccccCCchhcCCCEEEEecccccC
Confidence 4455 7889999999988 789999999999999999999999953 4555666677789999999998 6664
No 323
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.61 E-value=4.6e-14 Score=161.12 Aligned_cols=210 Identities=20% Similarity=0.167 Sum_probs=146.1
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.+++++|.+.+ +..++|.++..++++++. +++++|+++...|+..... +...|++++.++.
T Consensus 42 ~~~le~~la~l~g~~~a-~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 42 VDALEKKLAALEGGEAA-LAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred HHHHHHHHHHHHCCCCE-EEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 55788999999998765 445677766654444332 2467899988877665432 4568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++. .+.+..|.++|+|+++
T Consensus 113 ~-----d~~~l~~~i~---~~~~~v~~e~~~np~g~~~-dl~~i~~la~~~g~~livD~t~~--~~~~~~~~~~g~Divv 181 (369)
T cd00614 113 D-----DPEALEAAIK---PETKLVYVESPTNPTLKVV-DIEAIAELAHEHGALLVVDNTFA--TPYLQRPLELGADIVV 181 (369)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCc--chhcCChhhhCCcEEE
Confidence 4 6899999996 68999999998 5689888 89999999999999999999864 2333567778999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.+++|+|+.+ |...+|++++++ ++.+.+.... ...+. +. +. ..+|+.+..+ +.
T Consensus 182 ~S~tK~l~g~---~~~~gG~v~~~~~~l~~~l~~~~-------------~~~g~-~~----~p---~~a~~~l~~l--~t 235 (369)
T cd00614 182 HSATKYIGGH---SDVIAGVVVGSGEALIQRLRFLR-------------LALGT-IL----SP---FDAWLLLRGL--KT 235 (369)
T ss_pred eccceeccCC---CCceEEEEEeCcHHHHHHHHHHH-------------HhhCC-CC----CH---HHHHHHHcCC--CC
Confidence 9999998521 223478888876 5544332100 00011 10 11 1234333333 45
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 002263 756 LTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~ 777 (946)
+..+.++..+++.++++.|+++
T Consensus 236 l~~r~~~~~~na~~la~~L~~~ 257 (369)
T cd00614 236 LPLRMERHSENALKVAEFLEKH 257 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 5566777889999999999875
No 324
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=4.9e-14 Score=162.86 Aligned_cols=145 Identities=21% Similarity=0.244 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec-c--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L-- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~-~-- 176 (946)
...++++.+|++.|.+ .+..+.+||+++.++++++ +. +||+||++..+|.++...+...++..|++++++| .
T Consensus 70 t~~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~l-l~--~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d 144 (437)
T PRK05613 70 TVEALENRIASLEGGV--HAVAFASGQAAETAAILNL-AG--AGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDD 144 (437)
T ss_pred HHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHh-cC--CCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCC
Confidence 3556789999999985 3777888888888777665 33 8999999999999997766555667899999986 3
Q ss_pred -ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecccccccc
Q 002263 177 -KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVP 250 (946)
Q Consensus 177 -~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~k~lg~P 250 (946)
+++++ ++++|++|++.++ |.+|.+.|+++|+++||++|++++|++ .++.+....|.++|+|++++|++|+.++
T Consensus 145 ~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~-t~a~g~~~~p~~~GaDivv~S~~K~l~G 220 (437)
T PRK05613 145 PESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDN-TIATAALVRPLELGADVVVASLTKFYTG 220 (437)
T ss_pred HHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEEC-CCccccccChHHhCCCEEEeeccceecC
Confidence 34666 7888998888765 788999999999999999999999953 4466666677789999999999555333
No 325
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.61 E-value=9.4e-14 Score=156.85 Aligned_cols=296 Identities=15% Similarity=0.067 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcc--eEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCe-EEEE
Q 002263 97 RLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI-KVVV 173 (946)
Q Consensus 97 ~l~~l~e~q~~la~L~g~~~~~--~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi-~v~~ 173 (946)
-.+.+.+.++.+.+|++.+..+ +.+..+||+++||++..+--. +|+++++.. .|..... ...++..|+ ++..
T Consensus 37 F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~--~g~~vLv~g-~FG~r~~--~eia~~~g~~~v~~ 111 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC--RGVDVLAWE-SFGKGWV--TDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC--CCCeEEEEC-HHHHHHH--HHHHHhcCCCCcEE
Confidence 3577888899999999985433 445688999999998875312 678888864 4443311 033556677 4565
Q ss_pred eccc-----cccccCCCEeEEEEEc-CCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-cc
Q 002263 174 SDLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QR 246 (946)
Q Consensus 174 ~~~~-----~l~~i~~~t~~v~v~~-pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~ 246 (946)
++.+ +++.+..+ +.|++++ -+++|+.+|+++|+... ++++++|++ ..+++..+-.-+ ++|+++.++ |.
T Consensus 112 l~~~~g~~~~~~~ve~~-~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDa-vSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDFK-NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDA-TSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred EcCCCCCCCCHHHcCCC-CCEEEecCCCchheecccccccccc--CCCcEEEEc-cchhcCCCCChh-HCcEEEEechhc
Confidence 5432 11222221 2255555 47899999998777433 488999954 446665432222 599999999 77
Q ss_pred ccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccc---ccccccccCCCccchHHHHHHHHHHHH
Q 002263 247 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYA 323 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre---~~irre~aTsni~t~~~l~a~~aa~y~ 323 (946)
|++| ||++|+.++++.++++..+-- ..| -+. .+.++... .+.+ ..-|.|......++++..++
T Consensus 187 L~~p-----pGls~v~vs~~Al~~~~~~~~--y~~---~~~-~~~~~~~~~~~~~~~-~~~t~~TP~v~~l~a~~~~l-- 252 (374)
T TIGR01365 187 LGGE-----GAHGMLILSPRAVARLESYTP--AWP---LPK-IFRLTKGGKLNKKIF-EGSTINTPSMLCVEDWLDAL-- 252 (374)
T ss_pred cCCC-----CceEEEEECHHHHHHHhhcCC--CCC---Chh-hhccccccchhhhhh-cCCCCCChHHHHHHHHHHHH--
Confidence 8765 689999999998766531100 000 000 11111100 0111 12366665445666555544
Q ss_pred HHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcCeE-EEec--C-------C-----HHHHHHHHHHcC
Q 002263 324 VYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTV-KVKC--A-------D-----AHAIASAAYKIE 384 (946)
Q Consensus 324 ~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~~~-~i~~--~-------~-----~~~v~~~L~~~G 384 (946)
.++..+ |++++.+|+.++++.++++++++|.+.++.. ...+++ ++.. + + +.++.+.|.++|
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEG 332 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCC
Confidence 455554 8999999999999999999999974566642 233432 2333 2 1 467899999999
Q ss_pred Ceeee----ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 385 MNLRV----VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 385 I~~~~----~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
|.+.. ..+..+||.-.-..+.+|++.+++.|.
T Consensus 333 i~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 333 VAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred EEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 97742 224789999988999999999999874
No 326
>PLN02242 methionine gamma-lyase
Probab=99.61 E-value=1e-13 Score=159.97 Aligned_cols=218 Identities=18% Similarity=0.147 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHh-hcCCCeEEEEeccc-
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSDLK- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~-a~~~gi~v~~~~~~- 177 (946)
...++++.+|+++|.+. +.++.+|++++.++++++. . +||+||++...|+.+...+... .+..|+++++++..
T Consensus 77 t~~~LE~~lA~l~g~~~--~l~~~sG~~Ai~~al~al~-~--~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d 151 (418)
T PLN02242 77 TVLNLGRQMAALEGTEA--AYCTASGMSAISSVLLQLC-S--SGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITD 151 (418)
T ss_pred hHHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh-C--CCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCC
Confidence 34567889999999987 6688999988888777652 3 8999999999998887766432 33479999887754
Q ss_pred --cccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccC
Q 002263 178 --DIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPM 251 (946)
Q Consensus 178 --~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~ 251 (946)
++++ +++ +|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++. ....+.++|+||+++|. |.|+++
T Consensus 152 ~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD-ea~~~-~~~~~~~~g~divv~S~SK~l~g~- 228 (418)
T PLN02242 152 LEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD-NTFAP-MVLSPARLGADVVVHSISKFISGG- 228 (418)
T ss_pred HHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE-CCCCc-cCCCHHHcCCcEEEEeCccccCCC-
Confidence 4555 777 5999999998 77999999999999999999999995 34432 23356678999999998 877532
Q ss_pred CCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH
Q 002263 252 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 331 (946)
Q Consensus 252 ~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl 331 (946)
|..-+|++++++++++.+.... . . +. ...|. .+....|++ ...+..-+
T Consensus 229 --g~~~gG~iv~~~~li~~l~~~~----------~-----------~-~~----~~~g~--~~~~~~A~l--~~~~l~tl 276 (418)
T PLN02242 229 --ADIIAGAVCGPAELVNSMMDLH----------H-----------G-AL----MLLGP--TMNPKVAFE--LSERLPHL 276 (418)
T ss_pred --CCceEEEEEcCHHHHHHHHHHh----------h-----------h-hh----hccCC--CCCHHHHHH--HHcCCCcH
Confidence 2233588888877765541000 0 0 00 00010 010111221 33344455
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEc
Q 002263 332 KTIAQRVHGLAGTFALGLKKLGTVEVQ 358 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~g~~~~~ 358 (946)
....++..+++.++++.|++.+ +++.
T Consensus 277 ~~r~~~~~~~a~~la~~L~~~~-~~V~ 302 (418)
T PLN02242 277 SLRMKEHCRRAMEYAKRMKELG-LKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CEEE
Confidence 5566778899999999999997 7775
No 327
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=8.7e-14 Score=147.52 Aligned_cols=354 Identities=19% Similarity=0.247 Sum_probs=213.5
Q ss_pred HHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCc----ccccCC
Q 002263 468 LQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPN 543 (946)
Q Consensus 468 l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~----~~l~~~ 543 (946)
++++|+.....|--||||- .|.+.+-.|..+ |+.-+.|-. ++..-.|+..-+.+|+|. +++||.
T Consensus 46 IaSENFts~aVmeAlGS~l--tNKYSEGyPG~R--YYGGne~ID--------~iE~LCq~RALeaF~ldp~kWGVNVQp~ 113 (477)
T KOG2467|consen 46 IASENFTSRAVMEALGSCL--TNKYSEGYPGAR--YYGGNEYID--------QIELLCQKRALEAFGLDPEKWGVNVQPY 113 (477)
T ss_pred eecccchHHHHHHHHhHHh--hcccccCCCccc--ccCcchHHH--------HHHHHHHHHHHHHhCCCHHHCceeeccC
Confidence 3455544322333578864 356666665433 333332211 222234566667899985 689999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCCCCEEEE---cCCCCCCCHHHHHHcCC-------EEEEEcCCC-CCCCCHHHHHHHH
Q 002263 544 AGAAGEYAGLMVIRAYHKARGDHHRNVCII---PVSAHGTNPATAAMCGM-------KIVSVGTDA-KGNINIEELRKAA 612 (946)
Q Consensus 544 sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili---~~saHg~~~~~a~~~G~-------~vv~v~~~~-~g~~D~e~L~~~i 612 (946)
||+-+++++..|+.. +.++|.- |+.-|=+|.-......+ +-....+|+ .|.+|.|.|++..
T Consensus 114 SGSPANfavYtall~--------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A 185 (477)
T KOG2467|consen 114 SGSPANFAVYTALLK--------PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTA 185 (477)
T ss_pred CCCchhhHHHhhhcC--------CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHH
Confidence 999999887776642 4566763 44334344332111111 222334454 4999999999998
Q ss_pred HhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc---cccCCCccCCCEEEeCCCcccccCCCC
Q 002263 613 EANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV---GLTSPGYIGADVCHLNLHKTFCIPHGG 689 (946)
Q Consensus 613 ~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~---gl~~pg~~GaDi~~~s~hK~f~~P~g~ 689 (946)
...+++ .|+.-...+.-.+ |.+.+.+||.+.|+.+.+|-||..+++ ...+|.++ +||++...||+|
T Consensus 186 ~~frPk--~iiaG~SaY~R~~--DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHKsL------ 254 (477)
T KOG2467|consen 186 TLFRPK--LIIAGTSAYSRLI--DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHKSL------ 254 (477)
T ss_pred HhcCCc--EEEeccccchhhc--cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccccc------
Confidence 754444 4554433343444 689999999999999999998854332 33456554 899999999998
Q ss_pred CCCcceeEEEecccCCCCCCC--ccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHH
Q 002263 690 GGPGMGPIGVKKHLAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 767 (946)
Q Consensus 690 GGPg~G~i~~~~~l~~~lp~~--~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a 767 (946)
.||+.|.|..++-....-|.. -+.. |...+-...-++...+.|.++. +++.|.+ |+.-....+++..++.+.|+
T Consensus 255 RGPRg~mIFyRkGvk~~~~k~g~~i~y--dlE~kINfaVFP~lQGGPHNht-IaalAvA-LkQa~tpefk~Yq~qV~~Na 330 (477)
T KOG2467|consen 255 RGPRGAMIFYRKGVKSIKPKQGKEILY--DLEDKINFAVFPGLQGGPHNHT-IAALAVA-LKQAMTPEFKEYQKQVLKNA 330 (477)
T ss_pred cCCcceeEEEeccCCcCCCCCCCccee--chhhhhhhhccccccCCCCcch-HHHHHHH-HHhhCCHHHHHHHHHHHHHH
Confidence 789999999987554433221 1000 1100000001111222233222 2333333 34444456889999999999
Q ss_pred HHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC------CCCEEEEEcCCC
Q 002263 768 NYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP------VPGTLMIEPTES 840 (946)
Q Consensus 768 ~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p------~~~~lri~~t~~ 840 (946)
+.|+++|.+. |.++.. |.-.|-+.+|+++ .|++...+-+-|..-+|.+..-.-| .|+.+||.....
T Consensus 331 kala~~l~~~Gy~lvtg---GTDnHlvLvDLr~----~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAm 403 (477)
T KOG2467|consen 331 KALASALISRGYKLVTG---GTDNHLVLVDLRP----KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAM 403 (477)
T ss_pred HHHHHHHHHcCceEecC---CccceEEEEeccc----cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhh
Confidence 9999999875 888653 4556778899885 4778776666666666665321111 468899987665
Q ss_pred CC----HHHHHHHHHHHHHHHHHHHHH
Q 002263 841 ES----KEELDRYCDALISIREEIAQI 863 (946)
Q Consensus 841 ~t----~~eid~~~~aL~~i~~e~~~~ 863 (946)
+| ++|.++..+-+.++++-..++
T Consensus 404 TsRG~~e~df~~v~~fi~~av~i~~~~ 430 (477)
T KOG2467|consen 404 TSRGFGEEDFEKVADFIDRAVKIALEI 430 (477)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 54 467777777777666544443
No 328
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.60 E-value=1.8e-13 Score=157.94 Aligned_cols=299 Identities=14% Similarity=0.134 Sum_probs=182.5
Q ss_pred cccHHHHHHHHHHHHHHhhCCC---cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~---~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+.+++.+..|.+ .. .+..++|++. ++.++++.+. .+| +.+++|+++.+.+..+...+.+.|+
T Consensus 64 ~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~--al~~~~~~l~-~~~-~~gd~vlv~~P~y~~~~~~~~~~g~ 139 (396)
T PRK09147 64 TAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSRE--ALFAFAQTVI-DRD-GPGPLVVCPNPFYQIYEGAALLAGA 139 (396)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHH--HHHHHHHHHc-CCC-CCCCEEEEcCCCccchHHHHHhcCC
Confidence 3576677777777777777854 33 4555555542 2223334332 220 1267899999877777777889999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-cccc
Q 002263 591 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL 664 (946)
Q Consensus 591 ~vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl 664 (946)
+++.+|++++ +.+|+++|++++. ++++++++++| |.+|.+- +.+++|+++|++||+++++|.++..- ..+-
T Consensus 140 ~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 216 (396)
T PRK09147 140 EPYFLNCDPANNFAPDFDAVPAEVW---ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEA 216 (396)
T ss_pred EEEEeccCccccCccCHHHHHHHHh---hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCC
Confidence 9999999754 4799999998886 58899999999 5788875 35899999999999999999986421 1110
Q ss_pred -cCCC------ccCCC-----EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCccc
Q 002263 665 -TSPG------YIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 732 (946)
Q Consensus 665 -~~pg------~~GaD-----i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~ 732 (946)
..+. ..+.| +++.++.|.|+. .|.++|++.+++++.+.+-.. ......+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~----~GlRiG~~~~~~~l~~~~~~~--------------~~~~~~~~ 278 (396)
T PRK09147 217 APPLGLLEAAAELGRDDFKRLVVFHSLSKRSNV----PGLRSGFVAGDAALLKKFLLY--------------RTYHGCAM 278 (396)
T ss_pred CCCchhhhhccccCccccccEEEEeccccccCC----ccceeeeecCCHHHHHHHHHH--------------hhhcccCC
Confidence 0110 12222 667788888754 478899999887665443100 00011111
Q ss_pred CccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 733 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 733 ~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
+...+.. +..+| ...+-+++..+...++.+.+.+.|++.+.+.. +++..+ ++++++ .+..+++
T Consensus 279 ~~~~q~a-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--p~~g~f--~~~~~~-------~~~~~~~ 341 (396)
T PRK09147 279 PPAVQAA-SIAAW-----NDEAHVRENRALYREKFDAVTPILAPVLDVQL--PDAGFY--LWAKVP-------GDDTEFA 341 (396)
T ss_pred CHHHHHH-HHHHh-----cchhHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCeeEE--EEEECC-------CCHHHHH
Confidence 1111111 11111 11233444555555667778888877543321 122222 456654 2457888
Q ss_pred HHHH-HCCccc-CCCCC--------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 813 KRLM-DYGFHG-PTMSW--------PVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 813 ~~L~-~~Gi~~-~~~~~--------p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
++|. ++|+.+ +...| +..+.+||++.. +.+++++.++.|.+++
T Consensus 342 ~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 342 RRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred HHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 8886 679875 22222 124789999874 4677777777776654
No 329
>PRK07505 hypothetical protein; Provisional
Probab=99.60 E-value=1.3e-13 Score=159.55 Aligned_cols=291 Identities=17% Similarity=0.195 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH--HHHcCCEEEEEc
Q 002263 519 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGMKIVSVG 596 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~--a~~~G~~vv~v~ 596 (946)
.+...++++.+++++|. . .+..++|+.++++++..++.+. ..+ ++++.|+...+.|++.... ....+.+++.+|
T Consensus 90 ~~~~~~l~~~la~~~~~-~-~~~~~sG~~a~~~ai~~~~~~~-~~~-~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~ 165 (402)
T PRK07505 90 SQILKDLEEALSELFGA-S-VLTFTSCSAAHLGILPLLASGH-LTG-GVPPHMVFDKNAHASLNILKGICADETEVETID 165 (402)
T ss_pred hHHHHHHHHHHHHHhCC-C-EEEECChHHHHHHHHHHHHhcc-cCC-CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeC
Confidence 45677899999999987 3 3445577776655554433211 111 1233344556788865332 122456888888
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC------c
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------Y 669 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg------~ 669 (946)
. .|+++|+++++ +++.++++++|+ .+|.+. ++++|.++|+++|+++++|+++. ++++.+.| .
T Consensus 166 ~-----~d~~~l~~~~~---~~~~~~vl~~p~~~~G~~~-~~~~i~~l~~~~~~~li~DEa~~--~~~~g~~g~~~~~~~ 234 (402)
T PRK07505 166 H-----NDLDALEDICK---TNKTVAYVADGVYSMGGIA-PVKELLRLQEKYGLFLYIDDAHG--LSIYGKNGEGYVRSE 234 (402)
T ss_pred C-----CCHHHHHHHHh---cCCCEEEEEecccccCCcC-CHHHHHHHHHHcCCEEEEECccc--ccCcCCCCCchHHHH
Confidence 6 48999999986 456778888884 678887 69999999999999999999863 22222111 1
Q ss_pred cC---CC--EEEeCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 670 IG---AD--VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 670 ~G---aD--i~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
++ .| +++.++.|.|+. +| |++.+ ++++.+.+.... .....++++ +...+++
T Consensus 235 ~~~~~~d~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~~--------------~~~t~~~~~--~~~a~aa 291 (402)
T PRK07505 235 LDYRLNERTIIAASLGKAFGA------SG-GVIMLGDAEQIELILRYA--------------GPLAFSQSL--NVAALGA 291 (402)
T ss_pred cCCCCCCCeEEEEechhhhhc------cC-eEEEeCCHHHHHHHHHhC--------------CCceeCCCC--CHHHHHH
Confidence 23 24 445567788742 22 56654 444443321100 000011110 1223333
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
+.+.+..+.++.+.+..++..++.+++.+.+.. . ..+ .......+.+. ......++.++|.++||.+.
T Consensus 292 ~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~--~~g---~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~v~ 359 (402)
T PRK07505 292 ILASAEIHLSEELDQLQQKLQNNIALFDSLIPT--E--QSG---SFLPIRLIYIG-----DEDTAIKAAKQLLDRGFYTS 359 (402)
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--c--CCC---CCCCEEEEEeC-----CHHHHHHHHHHHHHCCCeEe
Confidence 445555555555555444333333333222211 1 111 11111112211 01235789999999999986
Q ss_pred CCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 824 TMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 824 ~~~~p-~~---~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
...+| ++ +.|||+|+..+|++|+|+++++|++++++
T Consensus 360 ~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 360 PVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred eecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 55555 22 58999999999999999999999988643
No 330
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.60 E-value=2e-13 Score=157.07 Aligned_cols=295 Identities=14% Similarity=0.133 Sum_probs=179.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+.+|.+ .. .+..++|++. +..++++.+. .++++|++++..++.+..+++..|.++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~--~i~~~~~~~~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~~ 141 (385)
T PRK09276 69 EGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE--GIAHIPLAFV-----NPGDVVLVPDPGYPVYKIGTIFAGGEP 141 (385)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH--HHHHHHHHhC-----CCCCEEEEcCCCCcChHHHHHHcCCEE
Confidence 566666666667776665653 32 3555555542 2223334332 256889999998877777888999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccc-ccccC
Q 002263 593 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 666 (946)
Q Consensus 593 v~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~~ 666 (946)
+.++.+.+ ..+|++++++++. +++++|++++| |.+|.+-+ .+++|+++|+++|+++++|.++.... .+...
T Consensus 142 ~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (385)
T PRK09276 142 YFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP 218 (385)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCC
Confidence 99998643 4589999998886 68899999999 57898862 37999999999999999999864211 11111
Q ss_pred C--Cc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 667 P--GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 667 p--g~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
+ .. .+-.+++.++.|.|+.| |.++|++++++++.+.+... + .....+. +...
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~i~~~~l~~~~~~~------------~--~~~~~~~----~~~~ 276 (385)
T PRK09276 219 PSFLEVPGAKDVGIEFHSLSKTYNMT----GWRIGFAVGNADLIAGLGKV------------K--SNVDSGV----FQAI 276 (385)
T ss_pred CChhccCCCcCCEEEEecchhhcCCc----chhheeeeCCHHHHHHHHHH------------H--hhccCCC----CHHH
Confidence 1 11 12346677888988543 66799999887665543210 0 0001111 1111
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
..++..++. ...+-+++..+....+.+++.+.|++. .+.+..+++.++ ++++++ .+.+..++.++|. ++|
T Consensus 277 q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~--~~v~~~-----~~~~~~~l~~~ll~~~g 347 (385)
T PRK09276 277 QEAGIAALN-GPQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFY--VWAPVP-----KGYTSAEFATLLLDKAG 347 (385)
T ss_pred HHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceE--EEEECC-----CCCCHHHHHHHHHHhCC
Confidence 111222222 123334555555667788888989875 222212222221 345554 2457889999887 579
Q ss_pred cccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 820 FHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 820 i~~~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
+.+... .|. .++++||++. .+++++...++.|
T Consensus 348 i~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l 382 (385)
T PRK09276 348 VVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERI 382 (385)
T ss_pred EEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHH
Confidence 986432 232 2478999986 3455555544444
No 331
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.60 E-value=4.4e-13 Score=155.40 Aligned_cols=327 Identities=14% Similarity=0.175 Sum_probs=196.5
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r 557 (946)
..+|++.+++..++..+. ....+..+..+ ..+...++.+.|+++++.. ...++.++|+.++++++..+|
T Consensus 52 ~~lGh~~p~v~~ai~~ql-~~~~~~~~~~~--------~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr 122 (421)
T PRK09792 52 LNTGHRHPDLVAAVEQQL-QQFTHTAYQIV--------PYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIAR 122 (421)
T ss_pred hcCCCCCHHHHHHHHHHH-HhccCcccCcc--------CCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHH
Confidence 356777766666665552 21111111001 1123347778888887532 223566799999988888888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCC--C---CCCHHHHHHHHHhc--C
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK--G---NINIEELRKAAEAN--R 616 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~--g---~~D~e~L~~~i~~~--~ 616 (946)
.| ++|.+|+ ...++||....+....|. .++.+|+..+ + .-|++.+++.++++ .
T Consensus 123 ~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (421)
T PRK09792 123 AH------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEA 196 (421)
T ss_pred Hh------cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCC
Confidence 65 2345666 567899988776554332 1334444221 1 12457888888642 3
Q ss_pred CCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEecccccccccccCCCc------c--CCCEEEeCCCcccc
Q 002263 617 DNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFC 684 (946)
Q Consensus 617 ~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~------~--GaDi~~~s~hK~f~ 684 (946)
+++++|+++.. +..|+..++ +++|.++|++||+++|+|.++ .|+.+.|. + .+|++++ .|+++
T Consensus 197 ~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tg~gr~G~~~a~~~~~~~pDi~t~--gK~l~ 270 (421)
T PRK09792 197 KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQ----SGFARTGKLFAMDHYADKPDLMTM--AKSLA 270 (421)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCCCCchhHHHhcCCCCcEEEe--ehhhc
Confidence 57888877643 346755433 999999999999999999864 34433332 2 3687766 58884
Q ss_pred cCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH
Q 002263 685 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 764 (946)
Q Consensus 685 ~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~ 764 (946)
||-.+|.+++++++.+.+.... ..+. +.|+.+.++++.+.+..+.++.+.+ +..
T Consensus 271 -----~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~gnpl~~aaa~a~l~~l~~~~~~~---~~~ 324 (421)
T PRK09792 271 -----GGMPLSGVVGNANIMDAPAPGG--------------LGGT----YAGNPLAVAAAHAVLNIIDKESLCE---RAN 324 (421)
T ss_pred -----CCCceEEEEEcHHHHhccCCCC--------------cCCC----CCCCHHHHHHHHHHHHHHHhhhHHH---HHH
Confidence 4456888998887766543110 0011 2345666667777888776554333 333
Q ss_pred HHHHHHHHHHhcc---CCee--eccCCCceeeeEEEeccccc--ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 002263 765 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK--NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 837 (946)
Q Consensus 765 ~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~--~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~ 837 (946)
...+++.+.|+++ +... ..|. |.. +.+.+..-. .........+.+.+.++|+.+.... +.++.+|+.|
T Consensus 325 ~~g~~l~~~l~~l~~~~p~v~~vrG~-Gl~---~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g-~~~~~irl~P 399 (421)
T PRK09792 325 QLGQRLKNTLIDAKESVPAIAAVRGL-GSM---IAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG-AYGNVIRFLY 399 (421)
T ss_pred HHHHHHHHHHHHHHHhCCCcceeccc-ceE---EEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC-CCCCEEEEeC
Confidence 5566777766553 3321 1221 322 334443100 0001235678888999999874211 2247899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 002263 838 TESESKEELDRYCDALISIRE 858 (946)
Q Consensus 838 t~~~t~~eid~~~~aL~~i~~ 858 (946)
+...+++||++++++|.+++.
T Consensus 400 ~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 400 PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999988763
No 332
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.60 E-value=2.1e-13 Score=155.79 Aligned_cols=291 Identities=15% Similarity=0.177 Sum_probs=180.4
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.+|++...+..++|++..+. ++++.+. .+++.|+++...|..+...+...|.+++.+|++.++
T Consensus 70 ~~Lr~~ia~~~~~~~~~I~it~G~~~~l~--~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~- 141 (369)
T PRK08153 70 HDLRHALAAHHGVAPENIMVGEGIDGLLG--LIVRLYV-----EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR- 141 (369)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHH--HHHHHhc-----CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-
Confidence 46788888888988766677777754322 2233221 256889999887766666688899999999987664
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHH--cCCEEEEecccccc-cccccCC-CccCCC-EEE
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNA-QVGLTSP-GYIGAD-VCH 676 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a-~~gl~~p-g~~GaD-i~~ 676 (946)
+|++++.+++. .++++++++++|+ .+|.+- +.+++.++++. +|+++++|.++..- ..+-..+ .....+ +++
T Consensus 142 ~~~~~l~~~~~--~~~~~~i~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 142 EDLDALLDAAR--RENAPLVYLANPDNPMGSWH-PAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCHHHHHHHhc--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 89999887775 2578889999994 689987 46666555543 38999999986311 0110001 011122 556
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.++.|+|++ .|.++|++++++++.+.+... ... .+.+ .....++.+++. ..+-+
T Consensus 219 ~SfSK~~g~----~GlRiG~~v~~~~~~~~l~~~--------------~~~--~~~s----~~~q~~~~~~l~--~~~~~ 272 (369)
T PRK08153 219 RTFSKAYGL----AGARVGYAIGAPGTIKAFDKV--------------RNH--FGMN----RIAQAAALAALK--DQAYL 272 (369)
T ss_pred ecchHhccC----cchheeeeecCHHHHHHHHHh--------------hcC--CCCC----HHHHHHHHHHhc--CHHHH
Confidence 677788754 478899999887665443210 000 1111 112222333332 12234
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEE
Q 002263 757 TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLM 834 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~~~~lr 834 (946)
++..+....+.+++.+.|++. +.+ ++ .+..+ +.+++.. ....+.++.+.|.++|+.+.... .+..+++|
T Consensus 273 ~~~~~~~~~~r~~~~~~L~~~g~~~-~p--~~~~f--~~~~~~~----~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iR 343 (369)
T PRK08153 273 AEVVGKIAAARDRIAAIARANGLTP-LP--SATNF--VAIDCGR----DGAFARAVLDGLIARDIFVRMPGVAPLDRCIR 343 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcc-CC--CcCcE--EEEECCC----CcccHHHHHHHHHHCCeEEeeCCCCCCCCeEE
Confidence 445555556777788888764 332 11 12222 3345431 12457899999999999873211 12247899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 835 IEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 835 i~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
|++. +++|+++|+++|+++...+++
T Consensus 344 is~~---~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 344 VSCG---PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred EecC---CHHHHHHHHHHHHHHHHHhhc
Confidence 9985 689999999999998876553
No 333
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.60 E-value=3.3e-13 Score=156.09 Aligned_cols=306 Identities=13% Similarity=0.121 Sum_probs=176.6
Q ss_pred ccHHHHHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 516 QGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+|..++...+.+++.+. | .+...+..++|++. +..++++.+. .++++|+++...+..+...+...|++++
T Consensus 73 ~g~~~lr~aia~~~~~~-~~~~~~~~i~~t~G~~~--al~~~~~~l~-----~~gd~v~i~~P~y~~~~~~~~~~g~~v~ 144 (401)
T TIGR01264 73 VGALSAREAIASYYHNP-DGPIEADDVVLCSGCSH--AIEMCIAALA-----NAGQNILVPRPGFPLYETLAESMGIEVK 144 (401)
T ss_pred CCCHHHHHHHHHHHhhc-CCCCCHHHEEECcChHH--HHHHHHHHhC-----CCCCEEEEeCCCChhHHHHHHHcCCEEE
Confidence 56555444444444331 2 33334444444432 2333344332 2457899998877666667889999999
Q ss_pred EEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccccc-C
Q 002263 594 SVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT-S 666 (946)
Q Consensus 594 ~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl~-~ 666 (946)
.++++. ++.+|+++|+++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|.++..- ..+-. .
T Consensus 145 ~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (401)
T TIGR01264 145 LYNLLPDKSWEIDLKQLESLID---EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE 221 (401)
T ss_pred EeecCCccCCCCCHHHHHHHhc---cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc
Confidence 998854 36899999999886 578889999994 788875 25999999999999999999986321 11100 0
Q ss_pred C-CccCC--C-EEEeCCCcccccCCCCCCCcceeEEEecc------cCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 667 P-GYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 667 p-g~~Ga--D-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~------l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
+ ..+-. . |++.++.|+|+.| |-++|++.+.+. +...+.. ... ...+.+...
T Consensus 222 ~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG~iv~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~ 282 (401)
T TIGR01264 222 PLASLSSTVPILSCGGLAKRWLVP----GWRLGWIIIHDRRGILRDIRDGLVK--------------LSQ-RILGPCTIV 282 (401)
T ss_pred cHHHcCCCCcEEEEccCcccCCCc----cceEEEEEecCcchhHHHHHHHHHH--------------Hhh-ccCCCCcHH
Confidence 1 11111 2 5567788887644 788999998642 1111100 000 001111111
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
+. ++..+|....++-+++..+....+.+++.+.|++...+.+..+.+..+ +.++++........+..++.++|.
T Consensus 283 q~----a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~l~ 356 (401)
T TIGR01264 283 QG----ALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMY--MMVGIEMEHFPEFKNDVEFTERLV 356 (401)
T ss_pred HH----HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeE--EEEEecccccCCCCCHHHHHHHHH
Confidence 11 122333321233345555566667788888888741222212222222 345543100001235678888876
Q ss_pred -HCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 817 -DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 817 -~~Gi~~~-~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
++|+.+. ...|..++++||++.. +.++++..++.|.+.+++
T Consensus 357 ~~~gI~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 357 AEQSVFCLPGSCFEYPGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred HhCCEEEeCchhcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 7899853 3234346899999974 477888888888776653
No 334
>PRK05968 hypothetical protein; Provisional
Probab=99.60 E-value=4.3e-14 Score=162.07 Aligned_cols=283 Identities=14% Similarity=0.115 Sum_probs=177.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH----HHHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~----~~a~~~G~~vv~v~~ 597 (946)
..++++.+++++|.+.. +..++|+.+...+++++ . +++++||++...|+.+. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~al~al---~-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEGAEDA-RGFASGMAAISSTVLSF---V-----EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 55788999999998765 34466765554333322 1 25688998887766543 235668999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |++++++++ ++|++|++++|+ ..+.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 136 ~-----d~~~l~~~i----~~tklV~ie~pt~~~~~~~-dl~~i~~la~~~gi~vivD~a~a~--~~~~~p~~~g~Divv 203 (389)
T PRK05968 136 R-----DEEAVAKAL----PGAKLLYLESPTSWVFELQ-DVAALAALAKRHGVVTMIDNSWAS--PVFQRPITLGVDLVI 203 (389)
T ss_pred C-----CHHHHHHhc----ccCCEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--hhccCchhcCCcEEE
Confidence 3 899999887 467889999985 566666 899999999999999999998642 223456678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC-CcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~-~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|++|+|+.| |++..|+++.++++...+..... ...+ .++ . ..||.- ..+-+.
T Consensus 204 ~S~tK~l~g~---~~~~gG~i~~~~~~~~~l~~~~~------------~~~g~~~~------~---~~A~~~--l~~L~t 257 (389)
T PRK05968 204 HSASKYLGGH---SDTVAGVVAGSKEHIARINAEAY------------PYLGAKLS------P---FEAWLL--LRGLRT 257 (389)
T ss_pred eeccccccCC---CCeEEEEEEECHHHHHHHHHHHH------------HhCCCCCC------h---HHHHHH--HcccCc
Confidence 9999998632 34557888877765443211000 0001 111 1 112332 333345
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeeccCCC-------ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC--
Q 002263 756 LTEASKIAILNANYMAKRLEKHY---PILFRGVNG-------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-- 823 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~-------~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~-- 823 (946)
+..+.++..+++.++++.|+++. .+.+++... .....+.|++. .+.+..++.++|...++.++
T Consensus 258 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~-----~~~~~~~f~~~L~~~~~~~s~G 332 (389)
T PRK05968 258 LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR-----EGIDVRAFADALKLFRLGVSWG 332 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC-----CHHHHHHHHHhCCccEEecCCC
Confidence 66667777788999999998752 233343110 01112344443 13456788888876554321
Q ss_pred ---C-CC---------C--------CC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 824 ---T-MS---------W--------PV-PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 824 ---~-~~---------~--------p~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+ +. . .+ .+.+|+++... +.+.+++.|+++++.+
T Consensus 333 ~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE----~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 333 GHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE----GTEALWADLEQALAAA 387 (389)
T ss_pred CCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHHh
Confidence 1 00 0 01 36899999764 4556666666665543
No 335
>PLN02187 rooty/superroot1
Probab=99.60 E-value=3.2e-13 Score=158.29 Aligned_cols=343 Identities=14% Similarity=0.156 Sum_probs=197.9
Q ss_pred CCccccceeeecCCCc----cccccc-----ccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCC--CcccccCCc
Q 002263 476 CHSMIPLGSCTMKLNA----TTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNA 544 (946)
Q Consensus 476 ~~~~~~lGs~~~~~~~----~~~~~~-----~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~--~~~~l~~~s 544 (946)
.+.+++||.+.+.+.+ ..+... +..+.. +.|.| .+|..++...+.+++.+-.|. +...+..++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKG---NSYGP---GAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCC---CCCCC---CCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 4568899988765321 111111 111222 23433 467666665666666554443 444454455
Q ss_pred hH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC--CCCCCCHHHHHHHHHhcCCCeEE
Q 002263 545 GA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--AKGNINIEELRKAAEANRDNLST 621 (946)
Q Consensus 545 Ga-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~--~~g~~D~e~L~~~i~~~~~~t~~ 621 (946)
|+ ++. .++++.+. .++++|++++..++.+...+...|++++.++.. .+..+|+++|+++++ +++++
T Consensus 139 G~~~al---~~~~~~l~-----~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~ 207 (462)
T PLN02187 139 GCNQGI---EIVFESLA-----RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVA 207 (462)
T ss_pred CHHHHH---HHHHHHhc-----CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEE
Confidence 54 343 33334332 256899999998777777788999999999874 346899999999886 68899
Q ss_pred EEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--ccCCCccCC--C-EEEeCCCcccccCCCCCCC
Q 002263 622 LMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--LTSPGYIGA--D-VCHLNLHKTFCIPHGGGGP 692 (946)
Q Consensus 622 vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g--l~~pg~~Ga--D-i~~~s~hK~f~~P~g~GGP 692 (946)
+++++| |.+|.+- ..+++|+++|+++|+++++|.++..- +.+ +.+...+.. . +++.++.|+|++| |.
T Consensus 208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~p----Gl 283 (462)
T PLN02187 208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVP----GW 283 (462)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCc----cc
Confidence 999999 4789875 24899999999999999999986421 111 111111111 1 4556788988755 78
Q ss_pred cceeEEEe-cc-c---CCCCCCCccccCCCCCCCCCCCCCCCc--ccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHH
Q 002263 693 GMGPIGVK-KH-L---APFLPSHPVVSTGGIPAPEKSQPLGTI--AAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 765 (946)
Q Consensus 693 g~G~i~~~-~~-l---~~~lp~~~v~~~~d~~~~~~~~~~~~i--~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~ 765 (946)
++|++++. ++ + ...+... +...++ +.+...+ .++.+++.....+-+++..+...+
T Consensus 284 RiG~~v~~~p~~~~~~~~~~~~~--------------~~~~~~~~~~s~~~Q----~a~~~~L~~~~~~~l~~~~~~l~~ 345 (462)
T PLN02187 284 KIGWIALNDPEGVFETTKVLQSI--------------KQNLDVTPDPATIIQ----AALPAILEKADKNFFAKKNKILKH 345 (462)
T ss_pred eeEEEEecCchhHHHHHHHHHHH--------------HHhccccCCCCHHHH----HHHHHHHhcCcHHHHHHHHHHHHH
Confidence 99999874 22 1 1111100 000111 1111111 112222222123335555566667
Q ss_pred HHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCC-CHHHHHHHH-HHCCccc-CCCCCCCCCEEEEEcCCCC
Q 002263 766 NANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL-MDYGFHG-PTMSWPVPGTLMIEPTESE 841 (946)
Q Consensus 766 ~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~-~~~~i~~~L-~~~Gi~~-~~~~~p~~~~lri~~t~~~ 841 (946)
+.+++.+.|+++ ....+..+.+..+ +.+++.. ....++ +..++..+| .++|+.+ +...|...+++||+++.
T Consensus 346 ~r~~l~~~L~~~~~~~~~~~P~gg~f--l~~~l~~-~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-- 420 (462)
T PLN02187 346 NVDLVCDRLKDIPCVVCPKKPESCTY--LLTKLEL-SLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-- 420 (462)
T ss_pred HHHHHHHHHhhCCCCcCCCCCCEeEE--EEeecCh-hhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC--
Confidence 788888999875 1111111222121 3334321 000122 345665554 6889875 33334446899999974
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q 002263 842 SKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 842 t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+.++..++.|.+.++...+
T Consensus 421 ~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 421 EAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred CHHHHHHHHHHHHHHHHHhhh
Confidence 478888888888888776554
No 336
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.60 E-value=3.8e-13 Score=154.99 Aligned_cols=276 Identities=20% Similarity=0.182 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|++.|.+. +.++.+|++++..++.++ +. +||+||++...|+.+...+...++..|++++.+|..
T Consensus 67 ~~~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~l-l~--~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 141 (403)
T PRK07503 67 LALLEQRMASLEGGEA--AVALASGMGAITATLWTL-LR--PGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPA 141 (403)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-cC--CCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHH
Confidence 4557789999999875 667888998877766554 33 899999999999877766655566789999998764
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +..+.+....|..+|+|++++|. |.|+++ |
T Consensus 142 ~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD-~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~---g 217 (403)
T PRK07503 142 ALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVD-NTYCTPYLQRPLELGADLVVHSATKYLGGH---G 217 (403)
T ss_pred HHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEccccccccCC---C
Confidence 4555 7788999999888 78999999999999999999999994 34444444455678999999998 777532 2
Q ss_pred CCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 255 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 255 GP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
+..+|++..++++.+++.. .+ + +. ....|. +++ .|+ +...+-+-+...
T Consensus 218 d~~gG~v~~~~~l~~~l~~--~~----------~------------~~--~~g~~~-s~~---~a~--l~l~~L~tl~~r 265 (403)
T PRK07503 218 DITAGLVVGGKALADRIRL--EG----------L------------KD--MTGAVM-SPF---DAF--LLMRGLKTLALR 265 (403)
T ss_pred ceeEEEEEcCHHHHHHHHh--hh----------H------------Hh--CcCCCC-CHH---HHH--HHHcCcchHHHH
Confidence 2336888877776655410 00 0 00 001111 111 111 123333444445
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEc-CC-----C-----------CcCeEEEecCC----HHHHHHHHHH--cCCeee---
Q 002263 335 AQRVHGLAGTFALGLKKLGTVEVQ-GL-----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR--- 388 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~~~-~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~--~GI~~~--- 388 (946)
.++..+++..+.+.|++.+.++.+ .+ + +...++|..++ +..+.+.|.- .+..+.
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l~~~~~slG~~~ 345 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQLFARAVSLGDAE 345 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCcceeecccCCCC
Confidence 566678899999999987434422 10 1 11236666543 2334333331 222110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 389 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ +.++.||+|++.-+.++=|++|.++|..
T Consensus 346 sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~ 396 (403)
T PRK07503 346 SLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDA 396 (403)
T ss_pred ccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 0 1246799999988766667777777753
No 337
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=1.9e-13 Score=156.30 Aligned_cols=212 Identities=22% Similarity=0.210 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--cc
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--KD 178 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--~~ 178 (946)
..++++.+|+++|.+. +.++.+|++++.+++.++ +. +||+||++...|+++...++.+ +..|++++.++. ++
T Consensus 55 ~~~lE~~lA~l~g~~~--~l~~~sG~~Ai~~~l~~l-l~--~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~d~~~ 128 (385)
T PRK08574 55 LRPLEEALAKLEGGVD--ALAFNSGMAAISTLFFSL-LK--AGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYPSTED 128 (385)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECCCHHH
Confidence 3457799999999864 677889998888776655 23 8999999999999999888764 568998887654 56
Q ss_pred ccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 179 IDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 179 l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
+++ +++ +|++|++.+| |.+|.+.|+++|+++||++|+++++| +.++.+....+.++|+|++++|. |+|++| |
T Consensus 129 l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~GaDivv~S~sK~l~g~---~ 204 (385)
T PRK08574 129 IIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVD-NTFATPLLYRPLRHGADFVVHSLTKYIAGH---N 204 (385)
T ss_pred HHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCcEEEeeCceeecCC---C
Confidence 776 776 8999999888 78999999999999999999999994 35566655556689999999998 777543 1
Q ss_pred CCceEEEEE-chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
..-+|.+.+ ++++.+++- ..|+..|+. . +++ .+ |+...+-+-+..
T Consensus 205 d~~gG~vi~~~~~~~~~~~-------------------------~~~~~~g~~-~---~p~---~a--~l~l~~l~tL~~ 250 (385)
T PRK08574 205 DVVGGVAVAWSGEFLEELW-------------------------EWRRRLGTI-M---QPF---EA--YLVLRGLKTLEV 250 (385)
T ss_pred CceeEEEEECcHHHHHHHH-------------------------HHHHhcCCC-C---CHH---HH--HHHHcccCcHHH
Confidence 112454444 444443320 001111110 0 111 11 223444445556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
..++..+++.++.+.|++.+.++
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcC
Confidence 66777789999999999875343
No 338
>PRK10534 L-threonine aldolase; Provisional
Probab=99.60 E-value=2.5e-14 Score=161.07 Aligned_cols=282 Identities=13% Similarity=0.151 Sum_probs=168.5
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC-CHHH-HHHcC-CEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPAT-AAMCG-MKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~-~~~~-a~~~G-~~vv~v~~~ 598 (946)
..++++.+++++|.+... ..++|++++...+++. . .++++|+++.+.|.. +... +...| ++++.++.+
T Consensus 36 ~~~L~~~la~~~g~~~~~-v~~~g~~a~~~~l~~~----~----~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (333)
T PRK10534 36 VNALQDYAAELSGKEAAL-FLPTGTQANLVALLSH----C----ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA 106 (333)
T ss_pred HHHHHHHHHHHhCCCeEE-EeCchHHHHHHHHHHh----c----CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC
Confidence 457889999999998764 4445555553333322 1 245788888776642 2211 23444 788888888
Q ss_pred CCCCCCHHHHHHHHHhc---CCCeEEEEEeCCCcccccc--cCHHHHHHHHHHcCCEEEEecccccccc-cccCC-C--c
Q 002263 599 AKGNINIEELRKAAEAN---RDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP-G--Y 669 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl~~p-g--~ 669 (946)
+++.+|+++|++++.++ ..++++|++++|++ |.+. +++++|+++|+++|+++++|+|+...-. ....+ . .
T Consensus 107 ~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~-G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~ 185 (333)
T PRK10534 107 ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN-GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT 185 (333)
T ss_pred CCCCCCHHHHHHhhcccCcCcccceEEEEecCCC-CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH
Confidence 78999999999999621 01688999999885 8875 2466677889999999999998542110 00111 1 1
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcce-eEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G-~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
.+.|.++.+++|.|+++ +| +++.++++...+... +.....++.. .+..++++.+.+
T Consensus 186 ~~~~~~~~s~SK~~~~~-------~G~~~~~~~~~i~~~~~~------------~~~~~~~~~~----~~~~~a~~~~~l 242 (333)
T PRK10534 186 QYCDSFTICLSKGLGTP-------VGSLLVGNRDYIKRARRW------------RKMTGGGMRQ----AGILAAAGLYAL 242 (333)
T ss_pred hcCCEEEEEeEcCCCCc-------ccceEEcCHHHHHHHHHH------------HHHhCCchhh----HHHHHHHHHHHH
Confidence 13576566788987643 34 566666665443210 0000001110 111122222222
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 827 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~ 827 (946)
.. ..+..++...+++++.++|++. +++. + +. .+-+.++++ +.+..++.+.|.++||.+...
T Consensus 243 ~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~-~-~~---~nfv~~~~~------~~~~~~~~~~l~~~gi~v~~~-- 304 (333)
T PRK10534 243 KH-----NVARLQEDHDNAAWLAEQLREAGADVM-R-QD---TNMLFVRVG------EEQAAALGEYMRERNVLINAS-- 304 (333)
T ss_pred Hh-----hHHHHHHHHHHHHHHHHHHHhCCCccC-C-CC---ceEEEEECC------chhHHHHHHHHHHcCeeecCC--
Confidence 21 1223333445678999999875 4432 1 11 222344543 124678899999999997522
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 828 PVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 828 p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
..+|++.+..+|+++++++++.|++.+
T Consensus 305 ---~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 ---PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ---ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 257887776679999999999998664
No 339
>PRK03321 putative aminotransferase; Provisional
Probab=99.60 E-value=5.7e-14 Score=159.52 Aligned_cols=282 Identities=14% Similarity=0.137 Sum_probs=179.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
..++++.+++++|.+...+..++|+++. ...+++... .++++|+++...+..++..++..|++++.++.++++
T Consensus 59 ~~~lr~~ia~~~~~~~~~I~~~~G~~~~--l~~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 131 (352)
T PRK03321 59 AVELRAALAEHLGVPPEHVAVGCGSVAL--CQQLVQATA-----GPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDH 131 (352)
T ss_pred HHHHHHHHHHHhCcCHHHEEECCCHHHH--HHHHHHHhc-----CCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCC
Confidence 3467788999999876555556676532 222233221 256889998765555555678899999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHH--cCCEEEEecccccc-cccccCCC----ccCCC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNA-QVGLTSPG----YIGAD 673 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a-~~gl~~pg----~~GaD 673 (946)
.+|+++++++++ +++++|++++| |.+|.+- +.++|.++|+. +|+++++|+++..- ..+...+. +...+
T Consensus 132 ~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T PRK03321 132 THDLDAMAAAIT---DRTRLIFVCNPNNPTGTVV-TPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPN 207 (352)
T ss_pred CCCHHHHHHhhc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCC
Confidence 899999999996 68889999999 5789998 79999999987 59999999986311 11111111 11123
Q ss_pred -EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 674 -VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 674 -i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
+++.++.|.|+.| |-++|++.+++++.+.+... . ...+.+ .....++.+.+. .
T Consensus 208 vi~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~--------------~--~~~~~s----~~~q~~a~~~l~--~ 261 (352)
T PRK03321 208 VVVLRTFSKAYGLA----GLRVGYAVGHPEVIAALRKV--------------A--VPFSVN----SLAQAAAIASLA--A 261 (352)
T ss_pred EEEEecchHHhhhH----HHhhhhhcCCHHHHHHHHHh--------------c--CCCCCC----HHHHHHHHHHhc--C
Confidence 4455788887533 56799999887766543210 0 011111 111112223332 2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCC
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 831 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~ 831 (946)
.+.+.+..++...+.+++.+.|++. +.+ ..+.+.+ +.+++. .+..++.++|.++||.+.... ..
T Consensus 262 ~~~~~~~~~~~~~~r~~~~~~L~~~~~~~--~~~~g~~---i~i~l~-------~~~~~~~~~l~~~gI~v~~~~---~~ 326 (352)
T PRK03321 262 EDELLERVDAVVAERDRVRAALRAAGWTV--PPSQANF---VWLPLG-------ERTADFAAAAAEAGVVVRPFA---GE 326 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCCCE---EEEeCC-------CCHHHHHHHHHHCCEEEEccC---CC
Confidence 2223444444455566788888764 332 1222322 445542 256889999999999875432 34
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.+||++ .+.+++++|+++|+++++
T Consensus 327 ~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 327 GVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred cEEEee---CCHHHHHHHHHHHHHHhc
Confidence 699997 578999999999988743
No 340
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=1.9e-13 Score=155.44 Aligned_cols=282 Identities=14% Similarity=0.127 Sum_probs=178.9
Q ss_pred HHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++.+++++|.+. ..+..++|++.. ..++++.+. .++++|+++...+..+...+...|++++.+++++++
T Consensus 66 ~~lr~~ia~~~~~~~~~~I~~t~G~~~~--i~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~ 138 (356)
T PRK04870 66 AALKAALRAAMGVPAGADVLLGNGSDEL--IQLLALACA-----KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADF 138 (356)
T ss_pred HHHHHHHHHHhCcCCCCcEEEcCCHHHH--HHHHHHHhc-----CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCC
Confidence 467788899988764 245556666432 222333321 256889999887666666688999999999998788
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccc--cc-CCCccCCCEEEe
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG--LT-SPGYIGADVCHL 677 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g--l~-~pg~~GaDi~~~ 677 (946)
.+|+++|++++.. .++++|++++| |.+|.+. +.+++.++++..++++++|+++.. +.. +. ......--+++.
T Consensus 139 ~~d~~~l~~~~~~--~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~~~ 214 (356)
T PRK04870 139 TLDLPAMLAAIAE--HRPALVFLAYPNNPTGNLF-DDADVERIIEAAPGLVVVDEAYQP-FAGDSWLPRLARFPNLLVMR 214 (356)
T ss_pred CCCHHHHHHHhhc--CCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCchh-hcCcchHHHHhhCCCEEEEe
Confidence 9999999999962 47888999999 5799997 678888877776899999998631 211 10 011112235566
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
+++| |+. .|.++|++.+++++.+.+... ....+++ ..++ .++...+.. .+-++
T Consensus 215 S~SK-~~~----~GlRiG~~i~~~~~i~~~~~~--------------~~~~~~~--~~~q----~~a~~~l~~--~~~~~ 267 (356)
T PRK04870 215 TVSK-LGL----AGLRLGYLAGHPAWIAELDKV--------------RPPYNVN--VLTQ----ATALFALEH--VDVLD 267 (356)
T ss_pred cchh-hhh----HHHhhhhhhCCHHHHHHHHHc--------------cCCCcCC--HHHH----HHHHHHHhC--HHHHH
Confidence 7778 643 467899998887655443210 0001111 1111 112222221 22355
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCC-C-CCCEEE
Q 002263 758 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSW-P-VPGTLM 834 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~-p-~~~~lr 834 (946)
+..++...+++++.+.|++...+.+..+.+. + +.++++ +..++.+.|.++||.+.. ..| + ..+++|
T Consensus 268 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~--~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iR 336 (356)
T PRK04870 268 AQAAQLRAERTRLAAALAALPGVTVFPSAAN-F--ILVRVP--------DAAAVFDGLKTRGVLVKNLSGMHPLLANCLR 336 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEECCCCCe-E--EEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCCCeEE
Confidence 5556666778888888876423322222222 1 445442 457889999999998642 223 2 357999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHH
Q 002263 835 IEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 835 i~~t~~~t~~eid~~~~aL~~i 856 (946)
|++. +.+++++|+++|+++
T Consensus 337 is~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 337 VTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred EeCC---CHHHHHHHHHHHHHh
Confidence 9985 689999999999875
No 341
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=2.6e-13 Score=154.92 Aligned_cols=212 Identities=17% Similarity=0.199 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---c
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 177 (946)
..++++.+|++.|.+. +.++.+|++++.+++. + .. +||+||+++..|+++...+...++.+|++++.++. +
T Consensus 52 ~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~~-~-l~--~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 125 (377)
T PRK07671 52 RAALEELIAVLEGGHA--GFAFGSGMAAITAVMM-L-FS--SGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLE 125 (377)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHH-H-hC--CCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHH
Confidence 4567789999999876 5678888877665432 2 23 89999999999998887776656678999999876 4
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|| +..+.+....|.++|+|++++|. |+|++|.+
T Consensus 126 ~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD-~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~-- 202 (377)
T PRK07671 126 EVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVD-NTFMTPYWQSPISLGADIVLHSATKYLGGHSD-- 202 (377)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCeEEEecCcccccCCcc--
Confidence 4555 7889999999998 67999999999999999999999995 33444444456788999999998 87764421
Q ss_pred CCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
--+|++.+++ ++.+++. ..|...| ... .+. . .|+...+.+-+..
T Consensus 203 -~~~G~~v~~~~~l~~~~~-------------------------~~~~~~g--~~~--~~~---~--a~l~~~~l~tl~~ 247 (377)
T PRK07671 203 -VVAGLVVVNSPELAEDLH-------------------------FVQNSTG--GIL--GPQ---D--SWLLLRGLKTLGI 247 (377)
T ss_pred -ceeEEEEeCcHHHHHHHH-------------------------HHHHhhc--CCC--CHH---H--HHHHHcCcChHHH
Confidence 0246666654 3433321 0000000 000 111 1 1223444445556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
..++..+++.+|.+.|++..++.
T Consensus 248 R~~~~~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 248 RMEEHETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred HHHHHHHHHHHHHHHHHcCCCee
Confidence 67777899999999999874353
No 342
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=2e-13 Score=156.84 Aligned_cols=143 Identities=20% Similarity=0.179 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 176 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 176 (946)
..++++.+|++.|... +..+.+||+|+.++++++ +. +||+||++...|..+...+....+.+|++++++|.
T Consensus 63 v~~lE~~la~leg~~~--av~~~SG~aAi~~al~al-l~--~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~ 137 (432)
T PRK06702 63 LAAFEQKLAELEGGVG--AVATASGQAAIMLAVLNI-CS--SGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTA 137 (432)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh-cC--CCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCH
Confidence 4457789999999876 778999999999888766 33 89999999999998888766655678999999876
Q ss_pred ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccc
Q 002263 177 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 249 (946)
Q Consensus 177 ~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~ 249 (946)
+++++ ++++|++|++.+| |.++.+.|+++|+++||++|+++++|. .++.+.+..|-+.||||++.|. |.+++
T Consensus 138 ~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~-T~~tP~~~~pl~~GADIvv~S~TKy~~G 212 (432)
T PRK06702 138 DEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDN-TLATPYLCQAFEHGANIIVHSTTKYIDG 212 (432)
T ss_pred HHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEEC-CCCchhhCChhhcCCCEEEEccccccCC
Confidence 45666 8899999999888 789999999999999999999999953 5566666778899999999998 88765
No 343
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.59 E-value=1e-13 Score=158.94 Aligned_cols=219 Identities=21% Similarity=0.207 Sum_probs=148.1
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.+++++|.+.+ +..++|+.+...++.++ . +++++|+++...|+..... +...|++++.++.
T Consensus 61 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~~l~al---~-----~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 61 VSNLEGRIAFLEGTEAA-VATSSGMGAIAATLLTI---L-----KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 45788999999998864 56677776654333332 1 2568899988877654332 4568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|...|+|+++
T Consensus 132 ~-----d~e~l~~~i~---~~tklV~le~p~Np~G~v~-dl~~I~~la~~~gi~livD~a~a~--~~~~~~~~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK---DNTKIVYFETPANPTMKLI-DMERVCRDAHSQGVKVIVDNTFAT--PMLTNPVALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCch--hccCCchhcCCCEEE
Confidence 4 7999999996 78999999999 4689887 799999999999999999998642 223456678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.|++|+|+.+ |+..+|+++.++++...+.. ... +......++ . ..||..+. +-+-+
T Consensus 201 ~S~sK~lgg~---g~~~gG~v~~~~~li~~l~~--~~~--------~~~~g~~l~------~---~~a~l~l~--~L~tl 256 (391)
T TIGR01328 201 HSATKYIGGH---GDVVAGLICGKAELLQQIRM--VGI--------KDMTGSVIS------P---FDAWLILR--GLKTL 256 (391)
T ss_pred ccccccccCC---CCceEEEEEcCHHHHHHHHH--HHH--------HhCCCCCCC------c---HHHHHHHh--CcCcH
Confidence 9999998532 22336888777765544321 000 000000111 1 11233332 33445
Q ss_pred HHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 002263 757 TEASKIAILNANYMAKRLEKHY---PILFRG 784 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~---~v~~~~ 784 (946)
..+.++..+++.++++.|+++. .+.|++
T Consensus 257 ~~r~~~~~~na~~la~~L~~~p~v~~v~yp~ 287 (391)
T TIGR01328 257 NIRMKRHSENAMKVAEYLKSHPAVEKVYYPG 287 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 5566777789999999998752 344554
No 344
>PLN02721 threonine aldolase
Probab=99.59 E-value=1.2e-13 Score=156.65 Aligned_cols=273 Identities=15% Similarity=0.113 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 176 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 176 (946)
..++++.+|+++|.+. +.++.+||.+..+++.+.. ..+||+|++++..|.+...... .++..|++++.++.
T Consensus 42 ~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~--~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHC--DVRGSEVILGDNSHIHLYENGG-ISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred HHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHc--cCCCCeEEEcCccceehhcccc-hhhhcCceeEecCCCcCC
Confidence 3567889999999875 5677777766554444432 1278999999999976554210 13356888887653
Q ss_pred ----ccccc-cC-------CCEeEEEEEcC--CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC----CCCC--
Q 002263 177 ----KDIDY-KS-------GDVCGVLVQYP--GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPPG-- 233 (946)
Q Consensus 177 ----~~l~~-i~-------~~t~~v~v~~p--n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l----~~~~-- 233 (946)
+++++ ++ +++++|+++++ |.+|.+.| +++|.++||++|++++++.. ..++.. .++.
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a-~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGA-RIFNASVALGVPVHRL 195 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEch-hhhcchhhhCCCHHHH
Confidence 34555 55 58899998764 45788765 78999999999999999431 122210 1222
Q ss_pred CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 234 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 234 ~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
..++|.++.+. |+|++ |..++++.++++++.+... ... ..++.+. .
T Consensus 196 ~~~~d~~~~s~sK~l~~------~~G~~~~~~~~~~~~~~~~-----~~~-------------------~~~~~~~---~ 242 (353)
T PLN02721 196 VKAADSVSVCLSKGLGA------PVGSVIVGSKSFIRKAKRL-----RKT-------------------LGGGMRQ---V 242 (353)
T ss_pred hhhCCEEEEecccccCC------ceeeEEecCHHHHHhHHHH-----HHh-------------------cCCCeeh---h
Confidence 24789988887 77753 3334566677765543110 000 0000000 0
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEE-cCCCCcCeEEEecC----C-HHHHHHHHHHcCCe
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV-QGLPFFDTVKVKCA----D-AHAIASAAYKIEMN 386 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~~~~~i~~~----~-~~~v~~~L~~~GI~ 386 (946)
+..+. +++. .+ .+-++++ ++..++++++++.|++++++.+ ...+..+.+.++.+ . ..++.++|.++||.
T Consensus 243 ~~~~~-~~~~-~l--~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~ 317 (353)
T PLN02721 243 GVLAA-AALV-AL--QENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVL 317 (353)
T ss_pred HHHHH-HHHH-HH--HHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcE
Confidence 11111 1110 11 1112223 3335678899999998843765 43332233444443 2 67899999999999
Q ss_pred eeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 387 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 387 ~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++....+.+|++++.+++++|+++++++|..
T Consensus 318 v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 318 LMPGNSSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred EecCCCceEEEEecCcCCHHHHHHHHHHHHH
Confidence 9887778999999999999999999999963
No 345
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.59 E-value=2.5e-13 Score=152.02 Aligned_cols=273 Identities=20% Similarity=0.174 Sum_probs=184.1
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccccc--
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDI-- 179 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l-- 179 (946)
..+|+.+|+|-|.+. +..+++|.+|+.+.++++. + +||+||+++..+..+...+....+++|+++.++|..+.
T Consensus 66 ~~lE~~~a~LEg~~~--~~afsSGmaAI~~~~l~ll-~--~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~ 140 (396)
T COG0626 66 DALEEALAELEGGED--AFAFSSGMAAISTALLALL-K--AGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEA 140 (396)
T ss_pred HHHHHHHHHhhCCCc--EEEecCcHHHHHHHHHHhc-C--CCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHH
Confidence 456789999999876 7889999999988777663 3 79999999999999999988888889999999887433
Q ss_pred -cc-cC-CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 180 -DY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 180 -~~-i~-~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++ +. ++|++|++..| |.+-.+.||++|+++||++|++++| ++.++-+++..|-++||||++.|+ |.+++--.
T Consensus 141 ~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvV-DNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsD-- 217 (396)
T COG0626 141 LEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVV-DNTFATPVLQRPLELGADIVVHSATKYLGGHSD-- 217 (396)
T ss_pred HHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEE-ECCcccccccChhhcCCCEEEEeccccccCCcc--
Confidence 33 44 68999999998 7899999999999999999988888 578888889999999999999998 87753110
Q ss_pred CCceEEEEEchh-hhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~~-~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
==+|.+..+++ +.+++ ....++.-|+ +- ++ .. .|+..-|-+-|.-
T Consensus 218 -vl~G~v~~~~~~~~~~~------------------------~~~~~~~~G~--~l--~p----~d-A~l~lRGlkTL~~ 263 (396)
T COG0626 218 -VLGGVVLTPNEELYELL------------------------FFAQRANTGA--VL--SP----FD-AWLLLRGLRTLAL 263 (396)
T ss_pred -eeeeEEecChHHHHHHH------------------------HHHHHhhcCC--CC--CH----HH-HHHHHhccchHHH
Confidence 01243333332 22211 0000111111 10 11 11 1445555555555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC---HHHHHHHHHHcCC--ee----
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD---AHAIASAAYKIEM--NL---- 387 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~---~~~v~~~L~~~GI--~~---- 387 (946)
..+++.++|..+++.|++...++ |+.+ + ....|+|.+.+ +.++.+.|+-..+ .+
T Consensus 264 Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgve 343 (396)
T COG0626 264 RMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVE 343 (396)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCcc
Confidence 66777889999999999874354 3321 0 11246776654 3344444432211 11
Q ss_pred -----e----------------eecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 388 -----R----------------VVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 388 -----~----------------~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+ -+.++-||+|++.-+.++=+++|-++|.
T Consensus 344 SLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~ 393 (396)
T COG0626 344 SLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALA 393 (396)
T ss_pred cccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 0 0125779999998777666666666664
No 346
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.59 E-value=1.8e-13 Score=155.93 Aligned_cols=228 Identities=18% Similarity=0.180 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|++.|.+. +.++.+|++++.+++ ++ .. +||+||+++..|+++...+...++..|++++.+|..
T Consensus 54 ~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~l-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 127 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SL-FR--SGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLK 127 (366)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HH-hC--CCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHH
Confidence 3467789999999976 567889998877653 33 23 789999999999988887776667789999998874
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+....|.++|+||+++|. |.++++ |
T Consensus 128 ~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD-~t~~~~~~~~p~~~g~di~i~S~sK~~~g~---~ 203 (366)
T PRK08247 128 AIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVD-NTFYTPVLQRPLEEGADIVIHSATKYLGGH---N 203 (366)
T ss_pred HHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCchhcCCcEEEeecceeccCC---C
Confidence 4555 7788999999998 57899999999999999999999995 44444555556678999999998 877532 1
Q ss_pred CCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
+--+|++.++ +++.+.+.. .+.. ...|. +++.+ |+...+-+-+..
T Consensus 204 d~~~G~iv~~~~~l~~~~~~-------------------------~~~~---~g~~~-s~~~a-----~l~~~~l~tl~~ 249 (366)
T PRK08247 204 DVLAGLVVAKGQELCERLAY-------------------------YQNA---AGAVL-SPFDS-----WLLIRGMKTLAL 249 (366)
T ss_pred ceeeeEEecChHHHHHHHHH-------------------------HHHh---cCCCC-ChHHH-----HHHHhccCcHHH
Confidence 1125677765 344333200 0000 01111 11111 122223344555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEcCCC-CcCeEEEecCC
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCAD 372 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~~~~i~~~~ 372 (946)
..++..+++..+.+.|++..++..+..| ....++|.+++
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~ 289 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD 289 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC
Confidence 5566788999999999988436643222 23345555544
No 347
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.59 E-value=3.7e-13 Score=154.69 Aligned_cols=300 Identities=12% Similarity=0.115 Sum_probs=180.7
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
.+|..++...+.+++.+-.|+. ...+..++|++. +..++++.+. .++++|+++...++.+...+...|.++
T Consensus 65 ~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 137 (384)
T PRK06348 65 SGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACH--GMYLALQSIL-----DPGDEVIIHEPYFTPYKDQIEMVGGKP 137 (384)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHH--HHHHHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCEE
Confidence 3576666666666666555553 344555555542 2223344332 246789999998887888889999999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc-cc
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 665 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g-l~ 665 (946)
+.++.++ +..+|+++|+++++ +++++|++++| |.+|.+- +++++|.++|+++|+++++|.++..- ... ..
T Consensus 138 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 138 IILETYEEDGFQINVKKLEALIT---SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEecCCcCcCCcCCHHHHHHhhC---cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 9998743 34699999999986 67888999999 4788875 25899999999999999999986421 111 11
Q ss_pred CCCc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 666 SPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 666 ~pg~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
+... .+-.+++.++.|+|+.| |-++|++.+++++...+... ......+.+..++.
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~~~~~~q~--- 273 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMT----GWRIGYVIAPDYIIETAKII--------------NEGICFSAPTISQR--- 273 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCc----cccceeeecCHHHHHHHHHH--------------HHhccCCCCHHHHH---
Confidence 1011 12236667888988544 67899999887665433110 00011121111111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCc
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 820 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi 820 (946)
++..++. ...+-+++..+....+.+++.+.|++...+.+..+++.++ ++++++. .+.+..++++.|. ++|+
T Consensus 274 -~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~~~~~~~----~~~~~~~l~~~l~~~~gv 345 (384)
T PRK06348 274 -AAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIY--AFINIKK----TGLSSVEFCEKLLKEAHV 345 (384)
T ss_pred -HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCE
Confidence 1222222 1222234444445566778888887642222222223222 3455541 1457788998876 5799
Q ss_pred ccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 821 HGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 821 ~~~-~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.+. ...|. ..+.+||+++ .+.++++..++.|++
T Consensus 346 ~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 381 (384)
T PRK06348 346 LVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEK 381 (384)
T ss_pred EEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHh
Confidence 753 32332 2478999985 467777777776654
No 348
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=4.9e-13 Score=153.37 Aligned_cols=276 Identities=19% Similarity=0.273 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCCE-------
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------- 591 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~~------- 591 (946)
+...++.++++++++.+. .++.++|++++++++..+|.| . ++++|++ ....||.........|..
T Consensus 71 ~~~~~la~~l~~~~~~~~-~~~~~sG~~a~~~A~~~a~~~---~---g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~ 143 (377)
T PRK02936 71 SLQEEVASLLAENSAGDL-VFFCNSGAEANEAALKLARKH---T---GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFG 143 (377)
T ss_pred HHHHHHHHHHHhcCCCCE-EEEeCCcHHHHHHHHHHHHHh---c---CCCeEEEECCCcCCCcHHhhhccCCccccccCC
Confidence 456678888888877654 366788998888777766654 1 3455665 467899887765554432
Q ss_pred -----EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc---CHHHHHHHHHHcCCEEEEecccccccc
Q 002263 592 -----IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 592 -----vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
++.++. .|++++++++. +++++|+++.+. ..|++.+ ++++|.++|++||+++++|.++.
T Consensus 144 ~~~~~~~~~~~-----~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~---- 211 (377)
T PRK02936 144 PLLPGFTHVPF-----NDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT---- 211 (377)
T ss_pred CCCCCceEeCC-----CCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 122222 27999999886 679999988764 4555532 49999999999999999999863
Q ss_pred cccCCC------ccC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 663 GLTSPG------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 663 gl~~pg------~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
++.+.| .+| .|++++ .|+|+ +|..+|++++++++.+.+.... .....+
T Consensus 212 g~g~~g~~~~~~~~~~~~di~t~--sK~l~-----~G~~ig~v~~~~~~~~~~~~~~--------------~~~t~~--- 267 (377)
T PRK02936 212 GIGRTGTLFAYEQFGLDPDIVTV--AKGLG-----NGIPVGAMIGKKELGTAFGPGS--------------HGSTFG--- 267 (377)
T ss_pred CCCcCchhhHHHhhCCCCcEEEE--ccccc-----CCCccEEEEEcHHHHhhccCCC--------------CCCCCC---
Confidence 232222 123 577654 58874 3456788888887766542110 001112
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPE 809 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~ 809 (946)
++...++++.+.|..+..+.+ .++...+.++++++|++. +... ..+ .+. -+.+++.. +..
T Consensus 268 -~~~~~~aaa~a~l~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~---~~~i~~~~-------~~~ 332 (377)
T PRK02936 268 -GNPLAMAAAKEVLQVIKQPSF---LEEVQEKGEYFLQKLQEELEHLECVKNIRG-KGL---MIGIECTE-------EVA 332 (377)
T ss_pred -CCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCcEEeEee-cce---EEEEEecc-------hHH
Confidence 234444455566665533322 244456777888888763 3321 112 121 13444431 367
Q ss_pred HHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 810 DVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 810 ~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
.+.+.|.++|+.+.... .+.+|++|+...++++++++++.|+++
T Consensus 333 ~~~~~l~~~gv~v~~~g---~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 333 PVIEQLREEGLLVLSAG---PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HHHHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 88999999998864222 378999999889999999999999765
No 349
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.59 E-value=8.8e-14 Score=158.95 Aligned_cols=281 Identities=16% Similarity=0.183 Sum_probs=180.1
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.+++++|.+.. +..++|+.+..+ + +. .. +++++||++...|+.+... +...|++++.++.
T Consensus 49 ~~~le~~la~l~g~~~~-l~~~sG~~al~~-~--l~-ll-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 49 RTALESLLAKLDKADRA-FAFSSGMAALDV-I--TR-LL-----NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHH-H--HH-Hh-----CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 56889999999998654 445666655422 2 22 11 2568899988877655432 4558999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|++++||+++... ....|..+|+|+++
T Consensus 119 ~-----d~~~le~~i~---~~tklv~le~psnptg~v~-dl~~I~~la~~~g~~vivD~a~~~~--~~~~~l~~g~Di~v 187 (378)
T TIGR01329 119 T-----DLDKVKAALG---PKTKLVLLESPTNPLQKIV-DIRKISEMAHAQNALVVVDNTMMSP--LLCNPLELGADIVY 187 (378)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCeee-cHHHHHHHHHHcCCEEEEECCCccc--ccCChhhcCCcEEE
Confidence 3 8999999996 78999999999 5689988 8999999999999999999986422 23466678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+|+||+++.| ++...|++++++ .+.+.+... + ...+ .+.+ .. -+++...+.+-
T Consensus 188 ~S~tK~l~G~---~~~~~G~v~~~~~~~~~~~~~~------------~-~~~G-~~~~----~~-----~a~l~~~~l~t 241 (378)
T TIGR01329 188 HSATKFLAGH---SDVMAGVLAVKGEEIAKKVYFL------------Q-NSTG-SGLA----PF-----DCWLLLRGIKT 241 (378)
T ss_pred EecceeccCC---ccceeEEEEeCcHHHHHHHHHH------------H-HhcC-CcCC----HH-----HHHHHHccCCC
Confidence 9999998522 112378888864 332222100 0 0001 1111 11 12334445556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCCc------------eeeeEEEecccccccCCCC-HHHHHHHHHHCC
Q 002263 756 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGT------------VAHEFIVDLRGLKNTAGIE-PEDVAKRLMDYG 819 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~---~~v~~~~~~~~------------~~~e~v~~~~~~~~~~g~~-~~~i~~~L~~~G 819 (946)
+..+.++...++..+++.|+++ -.+.|++-.+. +...+.|++. +.+ +.++.++|...+
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~------~~~~~~~~~~~L~~~~ 315 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG------SVALSKRLVEATKLFS 315 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC------CHHHHHHHHHhCcCcc
Confidence 7777788888999999999875 23344432110 1112334432 223 568888886655
Q ss_pred cccC--C----CCCC-----------------C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 820 FHGP--T----MSWP-----------------V-PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 820 i~~~--~----~~~p-----------------~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.++ . +..| + ++-+|+++.. |+.|.+++.|.++++.
T Consensus 316 i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 316 ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 5432 1 0011 0 3578999864 5677788888777664
No 350
>PLN00144 acetylornithine transaminase
Probab=99.59 E-value=5.8e-13 Score=152.51 Aligned_cols=285 Identities=19% Similarity=0.282 Sum_probs=184.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCC-------CCEEE-EcCCCCCCCHHHHHHcCCE--
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHH-------RNVCI-IPVSAHGTNPATAAMCGMK-- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~-------~~~Il-i~~saHg~~~~~a~~~G~~-- 591 (946)
..++.+.|+++++.+.+ ++.++|+.++++++..+|.|...+|..+ |.+|| +..++||....+....+-.
T Consensus 59 ~~~la~~l~~~~~~~~v-~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~ 137 (382)
T PLN00144 59 QVELAKRLVASSFADRV-FFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQY 137 (382)
T ss_pred HHHHHHHHHhcCCCCeE-EEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccc
Confidence 44778888888776543 6778999999999998898865443221 45566 5778999988776544421
Q ss_pred ----------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc-cC--HHHHHHHHHHcCCEEEEeccc
Q 002263 592 ----------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE-EG--IDEICKIIHDNGGQVYMDGAN 657 (946)
Q Consensus 592 ----------vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~-~~--i~~I~~ia~~~g~ll~vD~a~ 657 (946)
++.+|. -|+++|++.+. ..++++|+++.- +..|++. +. +++|.++|++||+++|+|.++
T Consensus 138 ~~~~~~~~~~~~~~~~-----~d~~~l~~~~~--~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~ 210 (382)
T PLN00144 138 RTPFEPLMPGVTFVEY-----GNLEAARKLIQ--KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQ 210 (382)
T ss_pred cccCCCCCCCeEEeCC-----CCHHHHHHhcC--CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 233333 37899999885 356777776532 3445553 24 899999999999999999874
Q ss_pred ccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 658 MNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 658 ~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
.++.+.|. .-+|++++ .|+++ ||-.+|++++++++.+.+.... . .+.
T Consensus 211 ----tg~gr~g~~~~~~~~~~~PDi~t~--sK~l~-----~G~pig~v~~~~~~~~~~~~~~-------------~-~~T 265 (382)
T PLN00144 211 ----CGLGRTGYLWAHEAYGVEPDIMTL--AKPLA-----GGLPIGAVLVTEKVASAINPGD-------------H-GST 265 (382)
T ss_pred ----hCCCccchHhhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhccCCCC-------------C-CCC
Confidence 34433321 23687766 48884 4456889999888776542110 0 011
Q ss_pred cccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeeEEEecccccccC
Q 002263 730 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLKNTA 804 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~~~~~~ 804 (946)
+.++.+.++++.+.|..+-.+.+.+.. ....+++.+.|++. +.. .+.+ .|.+ +.+.+.
T Consensus 266 ----~~~~pl~~aaa~a~l~~i~~~~~~~~~---~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~---~~l~l~------ 328 (382)
T PLN00144 266 ----FAGGPLVCNAALAVLDKISKPGFLASV---AKKGEYLRELLRRKLGGNPHVKEVRG-VGLL---VGIQLD------ 328 (382)
T ss_pred ----CCCCHHHHHHHHHHHHHHhhchHHHHH---HHHHHHHHHHHHHHHhhCCCceeeec-CceE---EEEEec------
Confidence 223555666777777777655554433 34455556655542 221 1222 2322 233332
Q ss_pred CCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 805 GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 805 g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+...+.+++.++|+.+..... .++||++|+...|++|++++++.|.+++.+
T Consensus 329 -~~~~~~~~~~~~~Gv~i~~~~~--~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 329 -VPAGPLVDACRDSGLLVLTAGK--GDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred -CccHHHHHHHHHCCeEEeecCC--CCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 2346899999999998643221 378999999988999999999999988764
No 351
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.59 E-value=9.6e-14 Score=158.34 Aligned_cols=217 Identities=17% Similarity=0.150 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+ +..++|+++..++++++ . +++++|+++...|+..... ....|++++.++.
T Consensus 55 ~~~Le~~lA~leg~e~i-vvt~gg~~Ai~~~l~al---l-----~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 55 RGLLEQTLSELESGKGA-VVTNCGTSALNLWVSAL---L-----GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHH---c-----CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 45788999999997654 44556665554443332 1 2568899988777643332 2345788888763
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|.++.. +.+..|.++|+|+++
T Consensus 126 -----~d~e~l~~~i~---~~tklV~lesP~NPtG~v~-dl~~I~~la~~~gi~vIvDea~~~--~~~~~pl~~GaDivv 194 (388)
T PRK08861 126 -----SDAAALDAALA---KKPKLILLETPSNPLVRVV-DIAELCQKAKAVGALVAVDNTFLT--PVLQKPLELGADFVI 194 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCccc--cccCCCcccCCCEEE
Confidence 58999999996 78999999999 5789988 799999999999999999998642 234577788999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|+||+++.| ++--.|++.+++ .+.+.+.. . + ..++... +|+ -| |+...|-+-
T Consensus 195 ~S~tK~l~G~---~d~~gG~i~~~~~~~~~~~~~----~--------~-~~~G~~~-~p~-------~a--~l~~rgl~T 248 (388)
T PRK08861 195 HSTTKYINGH---SDVIGGVLITKTKEHAEELAW----W--------G-NCIGATG-TPF-------DS--YMTLRGIRT 248 (388)
T ss_pred eecceeccCC---CcceeEEEEecHHHHHHHHHH----H--------H-hccCCCC-ChH-------HH--HHHHhcCCC
Confidence 9999998522 111257776653 33322210 0 0 0111111 111 13 355556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 002263 756 LTEASKIAILNANYMAKRLEKHY---PILFRG 784 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~---~v~~~~ 784 (946)
+.-+.++..++|..+++.|+++. .|.|++
T Consensus 249 l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~ 280 (388)
T PRK08861 249 LGARMRVHEESAQQILAYLQTQSLVGTIYHPS 280 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 77778888999999999999863 455655
No 352
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.59 E-value=2.7e-13 Score=158.36 Aligned_cols=282 Identities=13% Similarity=0.025 Sum_probs=177.0
Q ss_pred HHHHHHHHhCCCCcceEE---cccHHHHHHHHHHHhccccCCCCEEEEcC------CCCHHHHHHHHHhhcCCCeEE---
Q 002263 104 FQTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS------NCHPQTIDICITRADGFDIKV--- 171 (946)
Q Consensus 104 ~q~~la~L~g~~~~~~sl---~~~~Ta~~ea~~la~~~~~~~gd~vvv~~------~~Hps~~~~~~~~a~~~gi~v--- 171 (946)
+++..++++|.+.+...+ ..+|+.+..++++++. . +||+|+..+ ..|.+.....+ ....++.+
T Consensus 85 ~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~-~--pgD~Il~~d~~~gGhl~H~~~~~g~~--~s~~~~~~~~~ 159 (475)
T PLN03226 85 CQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL-Q--PHDRIMGLDLPHGGHLSHGYQTDGKK--ISATSIYFESM 159 (475)
T ss_pred HHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC-C--CCCEEEECCCCcCcchhhhhhhcccc--cccceEEEEee
Confidence 345688889987744322 2678888888888773 3 899999854 33444333221 11122221
Q ss_pred --EE------eccccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEE-ecCccccCCC-----CCCCc
Q 002263 172 --VV------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLALTILK-----PPGEL 235 (946)
Q Consensus 172 --~~------~~~~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~-a~~~al~~l~-----~~~~~ 235 (946)
.+ +|+++|++ +. .+++.|++.. +.+|...|+++|.++||++|++++|| +| +.|++. .|-+
T Consensus 160 ~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~~s~~~D~a~i~~ia~~~ga~LlvD~AH--~~Gli~~~~~~~p~~- 235 (475)
T PLN03226 160 PYRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SAYPRDWDYARMRKIADKVGALLMCDMAH--ISGLVAAQEAASPFE- 235 (475)
T ss_pred eeeecCCCCCcCHHHHHHHHhhcCCeEEEEec-CcCCCccCHHHHHHHHHHcCCEEEEEchh--hhCcccCCCCCCCCC-
Confidence 11 25667776 43 3566665543 45788889999999999999999993 44 444432 2222
Q ss_pred cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccc--ccccCCCccchH
Q 002263 236 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR--RDKATSNICTAQ 312 (946)
Q Consensus 236 GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~ir--re~aTsni~t~~ 312 (946)
++|++++++ |+|++| ..|+++++++.++.+.+. .+...+ |.... +..+ ...++++. .
T Consensus 236 ~~Div~~t~hK~L~GP------~Gg~I~~~~~~~~~~~~g-~~~~~d------~~~~i----~~a~~~~~~g~p~~---~ 295 (475)
T PLN03226 236 YCDVVTTTTHKSLRGP------RGGMIFFRKGPKPPKGQG-EGAVYD------YEDKI----NFAVFPGLQGGPHN---H 295 (475)
T ss_pred CCeEEEecCcccccCC------CceEEEEchhhcccccCC-CccHHH------HHHHh----ccccCCccCCCchH---H
Confidence 799999998 777544 447899988765443221 110000 10000 0000 11233332 4
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC--C--HHHHHHHHHHcCCee
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNL 387 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~--~--~~~v~~~L~~~GI~~ 387 (946)
.+.++.+++ .++-..|.+++++++++++++|++.|++.| ++++.. ...+.+.|.+. + ..++.+.|.+.||.+
T Consensus 296 ~iaal~aAl--~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~ 372 (475)
T PLN03226 296 TIAALAVAL--KQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITL 372 (475)
T ss_pred HHHHHHHHH--HHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEE
Confidence 455555554 566566888999999999999999999988 998852 22234444442 3 678999999999976
Q ss_pred ee---------ecCCeEEE----EeccCCCHHHHHHHHHHHhC
Q 002263 388 RV---------VDSNTVTA----SFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 388 ~~---------~~~~~lri----s~~~~~t~edid~ll~~l~~ 417 (946)
.. +.+..||+ -.+...+++|++++.+.|..
T Consensus 373 nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 373 NKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred CCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 42 23567888 44556788999999998863
No 353
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.58 E-value=2.5e-13 Score=154.05 Aligned_cols=236 Identities=18% Similarity=0.114 Sum_probs=154.1
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe-cccccc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS-DLKDID 180 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~-~~~~l~ 180 (946)
.++++.+|++.|.+ ++.++++|++++.+++..+ . +||+||++...+......+.......++++.+. |+++++
T Consensus 57 ~~le~~lA~leg~~--~~v~~~sG~aAi~~~l~~l--~--~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~ 130 (364)
T PRK07269 57 AKLEETLAAIESAD--YALATSSGMSAIVLAFSVF--P--VGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELI 130 (364)
T ss_pred HHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHh--C--CCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHH
Confidence 45778999999966 4888999998877665332 3 899999999888766654443333346665543 457777
Q ss_pred c-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCCCc
Q 002263 181 Y-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPH 257 (946)
Q Consensus 181 ~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~ 257 (946)
+ ++++|++|++.+| |.+|.+.|+++|+++||++|++++||. .++.+....|-++|+|++++|. |.++++ |.--
T Consensus 131 ~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~-t~~~~~~~~pl~~gaDivv~S~tK~l~g~---~d~~ 206 (364)
T PRK07269 131 AAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDN-TFYSPIYQRPIELGADIVLHSATKYLSGH---NDVL 206 (364)
T ss_pred HhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEEC-CCcccccCCchhhCCcEEEecCceeccCC---Cccc
Confidence 7 8889999999998 679999999999999999999999953 3344444566789999999998 777543 1111
Q ss_pred eEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHH
Q 002263 258 AAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 336 (946)
Q Consensus 258 ~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~ 336 (946)
+|++.+++ ++.+++- ..+...| .| .+++ .| |+...+-+-++...+
T Consensus 207 gG~v~~~~~~l~~~~~-------------------------~~~~~~G---~~-~s~~---~a--~l~~~~L~tL~~r~~ 252 (364)
T PRK07269 207 AGVVVTNDLELYEKLF-------------------------YNLNTTG---AV-LSPF---DS--YLLMRGLKTLSLRME 252 (364)
T ss_pred ceEEEeCcHHHHHHHH-------------------------HHHHHhC---CC-CCHH---HH--HHHHcCCCcHHHHHH
Confidence 45666653 3433320 0000011 11 0111 11 234455555777778
Q ss_pred HHHHHHHHHHHHHhcCCCEE-EcCCCCcCeEEEecCC---HHHHHHHHH
Q 002263 337 RVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCAD---AHAIASAAY 381 (946)
Q Consensus 337 ~~~~~a~~l~~~L~~~g~~~-~~~~~~~~~~~i~~~~---~~~v~~~L~ 381 (946)
+..+++.++++.|++...+. ++.++....++|...+ +..+.+.|.
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~ 301 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLK 301 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCC
Confidence 88899999999999874343 3323333456665544 334444443
No 354
>PLN02656 tyrosine transaminase
Probab=99.58 E-value=4.1e-13 Score=155.58 Aligned_cols=306 Identities=14% Similarity=0.100 Sum_probs=177.0
Q ss_pred cccHHHHHHHHHHHHHHhhCC--CcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 515 AQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
.+|..++...+.+++.+..|. +...+..++|++. +..++++.+. .++++|++++..|+.+...+.+.|+++
T Consensus 72 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~--al~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 144 (409)
T PLN02656 72 TVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ--AIDVALSMLA-----RPGANILLPRPGFPIYELCAAFRHLEV 144 (409)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH--HHHHHHHHHh-----CCCCeEEEeCCCCCcHHHHHHHcCCEE
Confidence 357666666666666655454 3334444444432 2333333332 256889999998887777788899999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccccc-
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT- 665 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl~- 665 (946)
+.+++++ ++.+|+++++++++ +++++|++++|+ .+|.+- .++++|+++|+++|+++++|.++.. ...+-.
T Consensus 145 ~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 221 (409)
T PLN02656 145 RYVDLLPEKGWEVDLDAVEALAD---QNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPF 221 (409)
T ss_pred EEEeCCCcCCCCCCHHHHHHHhc---cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCc
Confidence 9999853 35799999999986 678899999994 788883 2699999999999999999998631 111100
Q ss_pred CC-CccCC---CEEEeCCCcccccCCCCCCCcceeEEEec--------ccCCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 666 SP-GYIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 666 ~p-g~~Ga---Di~~~s~hK~f~~P~g~GGPg~G~i~~~~--------~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
.+ ..++. =|++.|+.|+|+.| |.++|++.+.. ++...+.. + .. ...+.+
T Consensus 222 ~~~~~~~~~~~vi~~~SfSK~f~~p----GlRiG~~i~~~~~~~~~~~~~~~~~~~--~------------~~-~~~~~s 282 (409)
T PLN02656 222 VPMGVFGSIVPVLTLGSLSKRWIVP----GWRLGWFVTTDPSGSFRDPKIVERIKK--Y------------FD-ILGGPA 282 (409)
T ss_pred ccHHHhcccCcEEEEcccchhccCc----ceeEEEEEEeCcccccccHHHHHHHHH--H------------Hh-hhcCCC
Confidence 11 11111 14567788987654 78999999842 22222110 0 00 000111
Q ss_pred ccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCee-eccCCCceeeeEEEecccccccCCC-CHHH-
Q 002263 734 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPED- 810 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~-~~~~~~~~~~e~v~~~~~~~~~~g~-~~~~- 810 (946)
.....++..++.....+-+++..+....+.+++.+.|+++.... +..+.+..+ ++++++.... .+. +..+
T Consensus 283 ----~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~--~w~~l~~~~~-~~~~~~~~~ 355 (409)
T PLN02656 283 ----TFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMA--VMVKLNLSLL-EDISDDIDF 355 (409)
T ss_pred ----HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEE--EEEecchhhc-CCCCCHHHH
Confidence 11111222233221223355555556667778888887741111 111222222 3455431000 011 2434
Q ss_pred HHHHHHHCCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 811 i~~~L~~~Gi~~-~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+.+.|.++|+.+ +...|...+++||+++. +.+++++.++.|++++.
T Consensus 356 ~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~--~~e~l~eal~rl~~~~~ 402 (409)
T PLN02656 356 CFKLAREESVIILPGTAVGLKNWLRITFAA--DPSSLEEALGRIKSFYL 402 (409)
T ss_pred HHHHHHhCCEEEecchhcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHH
Confidence 456677889875 33334446899999984 56666666666665543
No 355
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.58 E-value=5.6e-14 Score=160.15 Aligned_cols=289 Identities=19% Similarity=0.227 Sum_probs=182.3
Q ss_pred HHHHHHHHhhC------CCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 524 NLGEWLCTITG------FDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 524 el~~~la~l~G------~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
++++.+++.++ .+.. .+..++|++.....+. ... . ..++++|++++..|+.+...++..|++++.++
T Consensus 48 ~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~--~~~-~---~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~ 121 (363)
T PF00155_consen 48 ELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLL--RLL-K---INPGDTVLVPDPCYPSYIEAARLLGAEVIPVP 121 (363)
T ss_dssp HHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHH--HHH-H---SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhhhccCcccccceEEEEecccccchhhhh--hcc-c---ccccccceecCCccccccccccccCceeeecc
Confidence 44455555555 4445 6777778764432222 221 1 12467899999988888888999999999999
Q ss_pred CC--CCCCCCHHHHHHHHHhcC-C--CeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccccccccc---
Q 002263 597 TD--AKGNINIEELRKAAEANR-D--NLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLT--- 665 (946)
Q Consensus 597 ~~--~~g~~D~e~L~~~i~~~~-~--~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~--- 665 (946)
++ .++.+|+++|++.+++.. + ++.+|++++|+ .+|..- +++++|+++|+++|+++++|.++.....+-.
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 201 (363)
T PF00155_consen 122 LDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFG 201 (363)
T ss_dssp EEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTH
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccC
Confidence 64 567899999999998531 1 56899999994 688764 3577777779999999999998642211100
Q ss_pred --CC-CccCCC-EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 666 --SP-GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 666 --~p-g~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
.. .+.+.+ +++.|+.|+|+.| |.++|++++++.+.+.+.... .....+ ....
T Consensus 202 ~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~~~~--------------~~~~~~------~~~~ 257 (363)
T PF00155_consen 202 PIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLRRFQ--------------RSGLSS------SPMQ 257 (363)
T ss_dssp HHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHHHHH--------------HHTTSS------HHHH
T ss_pred cccccccccccceeeeecccccccc----ccccccccchhhhhhhhhhcc--------------cccccc------chhh
Confidence 00 012334 6777888988544 677999999876665442110 000111 1111
Q ss_pred HHHHHHHHHHcH--hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 742 PISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 742 ~~a~a~l~~lG~--eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
..+...+..-+. +-+++..++...+.+++.+.|++. +.+ +..+ +.++ +++.... .+..++.+.|.++
T Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~-~~~~-~~~~--~~~~~~~------~~~~~l~~~L~~~ 327 (363)
T PF00155_consen 258 AAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITV-LPPE-AGFF--LWVRLDP------NDAEELAQELLEE 327 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEE-EHHS-BSSE--EEEEESH------HHHHHHHHHHHHH
T ss_pred HHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhhe-eecc-CccE--EEEEccc------chHHHHHHHHHHh
Confidence 112222222221 134556666778888999999775 333 2222 2232 3344331 1467899999987
Q ss_pred -CcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 819 -GFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 819 -Gi~~~~-~~~p~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
||.+.. ..|..++.+|+++ -..+++++++++++|
T Consensus 328 ~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 328 YGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred CCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 998643 2233478999999 667899999999875
No 356
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.58 E-value=2.9e-13 Score=152.25 Aligned_cols=284 Identities=19% Similarity=0.226 Sum_probs=190.5
Q ss_pred HHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 522 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 522 ~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
..++++.+++.+| .+...+..+.|+... +-+.++.+. .++++|+++...++.+..+++..|++++.++.++
T Consensus 59 ~~~l~~a~a~~~~~~~~~~V~~gnGsde~--i~~l~~~~~-----~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~- 130 (356)
T COG0079 59 YRELRAALAEYYGVVDPENVLVGNGSDEL--IELLVRAFV-----EPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE- 130 (356)
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCChHHH--HHHHHHHhh-----cCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-
Confidence 3467888999999 665667767777643 333455553 2457899998888888888999999999999987
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc--CCEEEEecccccccccccCCCc-----cCC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGY-----IGA 672 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~gl~~pg~-----~Ga 672 (946)
+.+|++++.+.++ +++..|++++|| .+|..- +.++|.+++... +++|+||+|+. -|..+.. ..-
T Consensus 131 ~~~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~~~~vVvDEAY~----eF~~~~~~~l~~~~~ 202 (356)
T COG0079 131 FRLDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPEGGLVVIDEAYI----EFSPESSLELLKYPP 202 (356)
T ss_pred cccCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchh----hcCCchhhhhccCCC
Confidence 9999999999997 589999999995 799987 456666665543 88999999853 2322211 122
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
+++++ +||++-+|..|-++|+...++++...+... + ..-+++ .....++.+.+..-
T Consensus 203 nlivl---RTfSKa~gLAGlRlGy~ia~~~~i~~l~~v------------r--~p~~v~------~~a~~aa~aal~~~- 258 (356)
T COG0079 203 NLIVL---RTFSKAFGLAGLRVGYAIANPELIAALNKV------------R--PPFNVS------SPALAAAIAALRDA- 258 (356)
T ss_pred CEEEE---EecHHhhhcchhceeeccCCHHHHHHHHHh------------c--CCCCCC------HHHHHHHHHHcccH-
Confidence 36655 555555567789999988887776654210 0 000122 11111222222211
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC-C-C
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-P-V 829 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~-p-~ 829 (946)
+-+++..++....+.+|.+.|++. +.-.++.. .|=+.++++. +. +.++.+.|.++||.++.... + .
T Consensus 259 -~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~----aNFvlv~~~~-----~~-~~~l~~~L~~~giivR~~~~~~~~ 327 (356)
T COG0079 259 -DYLEESVERIREERERLYAALKALGLFGVFPSQ----ANFVLVRVPD-----AE-AAALAEALLKKGILVRDCSSVGLL 327 (356)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC----CcEEEEECCC-----cc-HHHHHHHHHHCCEEEEeCCCCCCC
Confidence 335566667777888999999875 22123321 2224456541 23 66899999999999875432 2 3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 830 PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 830 ~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+++||++ -|.+|.++|+++|.+++..
T Consensus 328 ~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 328 PGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred CCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 56999998 5788999999999988653
No 357
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.58 E-value=4.2e-13 Score=153.15 Aligned_cols=307 Identities=15% Similarity=0.109 Sum_probs=181.4
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
..++++++++.+|.+.+ +.+++|+++...+ ++.. +.+++++||++...|..+...+...|++++.++++++
T Consensus 33 ~~~~e~~la~~~g~~~~-v~~~sgt~aL~~~---l~al----~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~ 104 (376)
T TIGR02379 33 SRRCETWLENRTGTKKA-LLTPSCTAALEMA---ALLL----DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDT 104 (376)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHH---HHHc----CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence 45778899999998764 4556666654322 2221 2236789999998776666667889999999999876
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc-cccCCCccCCCEEEeCC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHLNL 679 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl~~pg~~GaDi~~~s~ 679 (946)
+.+|+++++++++ ++|++|+.++| +|... |+++|.++|+++|++++.|+++..... .-...+.+ .|+.++|+
T Consensus 105 ~~~d~~~le~~i~---~~tk~Iip~~~--~G~~~-d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~-~~~~~fSf 177 (376)
T TIGR02379 105 MNIDETLIESAIT---HRTKAIVPVHY--AGVAC-DMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI-GHLGTFSF 177 (376)
T ss_pred CCCCHHHHHHhcC---cCceEEEEeCC--CCCcc-CHHHHHHHHHHCCCEEEEECccccCCccCCcccCCC-CCEEEEeC
Confidence 5899999999997 78999988766 47776 799999999999999999998753211 00122333 38889998
Q ss_pred CcccccCCCCCCCcceeEEEe-cccCCCCCC-CccccCCC-C--CCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 680 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGG-I--PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~~d-~--~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
|++ ..+..||. +|++.++ +++.+.+.. +..|...+ . +... ......+..++--+...++...+.|..
T Consensus 178 ~~~--K~l~~g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~g~n~~~~~~~Aa~g~~qL~~---- 249 (376)
T TIGR02379 178 HET--KNYTSGGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVD-KYTWRDIGSSYLPSELQAAYLWAQLEQ---- 249 (376)
T ss_pred CCC--CcCcccCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCC-cceeeeecccCCccHHHHHHHHHHHHH----
Confidence 874 23333433 4666665 454443321 01111100 0 0000 000000111110012222222333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC--C-eeecc-CC--CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC
Q 002263 755 GLTEASKIAILNANYMAKRLEKHY--P-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP 828 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~--~-v~~~~-~~--~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p 828 (946)
+.+..++...++++..++|++.. . +..+. ++ ....|-+.+.++. +.+.+++.+.|.++||.......|
T Consensus 250 -l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~r~~l~~~L~~~gI~~~~~~~p 323 (376)
T TIGR02379 250 -ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD-----EDDRNELIKYLKEQEIMAVFHYVP 323 (376)
T ss_pred -hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC-----cCCHHHHHHHHHHCCCCccccCcC
Confidence 33444445566777777776542 1 11111 11 1233455555531 246789999999999975321111
Q ss_pred C-----------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 829 V-----------------------PGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 829 ~-----------------------~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
. ...|.+-.....|++|+++.+++|+++.
T Consensus 324 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 324 LHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0 1345555556688999999999998753
No 358
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.58 E-value=3.6e-13 Score=154.11 Aligned_cols=307 Identities=14% Similarity=0.058 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
...++++++++.+|.+.+ +..++|++|...+ ++.. +.+++++||++...|.+...++...|++++.++++++
T Consensus 32 ~~~~~e~~la~~~g~~~~-v~~~sgt~al~~~---l~~~----~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~ 103 (375)
T PRK11706 32 FTRRCQQWLEQRFGSAKV-LLTPSCTAALEMA---ALLL----DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD 103 (375)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHH---HHHh----CCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 345777889999998754 4456666654222 2221 1235689999999887777778899999999999877
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc-cccCCCccCCCEEEeC
Q 002263 601 -GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHLN 678 (946)
Q Consensus 601 -g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl~~pg~~GaDi~~~s 678 (946)
+.+|+++++++++ +++++|+++++ +|... ++++|.++|+++|+++++|+|+..... .-...|.+ .|+.++|
T Consensus 104 ~~~~d~~~le~~i~---~~tk~i~~~~~--~G~~~-~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~-~~~~~~S 176 (375)
T PRK11706 104 TMNIDETLIEAAIT---PKTRAIVPVHY--AGVAC-EMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTI-GHIGCFS 176 (375)
T ss_pred cCCcCHHHHHHhcC---CCCeEEEEeCC--CCCcc-CHHHHHHHHHHcCCEEEEECccccccccCCeeeecC-cCEEEEe
Confidence 4799999999996 68999998864 68776 799999999999999999998753221 10112333 4888899
Q ss_pred CC--cccccCCCCCCCcceeEEEecccCCCCCC-CccccCCCCCCCCC--CCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 679 LH--KTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPAPEK--SQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 679 ~h--K~f~~P~g~GGPg~G~i~~~~~l~~~lp~-~~v~~~~d~~~~~~--~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+| |.++. |-|++++..++++..++.. +..|...+...++. ......+..++.-+...++...+.+..
T Consensus 177 f~~~K~l~~-----g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~--- 248 (375)
T PRK11706 177 FHETKNYTA-----GEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEA--- 248 (375)
T ss_pred CCCCccccc-----cCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHH---
Confidence 88 87742 2233444444454432210 00010000000000 000001111111122222222233332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccC--C-eeec-cCCC--ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-
Q 002263 754 KGLTEASKIAILNANYMAKRLEKHY--P-ILFR-GVNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 826 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~~--~-v~~~-~~~~--~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~- 826 (946)
+.+..++..++++++.+.|++.- . +.++ .+.+ ...|.+.+.++ .+.+..++.+.|.++||.+...+
T Consensus 249 --l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r~~l~~~L~~~gI~~~~~~~ 321 (375)
T PRK11706 249 --ADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR-----DLEDRSALINFLKEAGIMAVFHYI 321 (375)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC-----CcCCHHHHHHHHHHCCCCccccCC
Confidence 34444555567778888887541 1 2111 1111 12334444443 13578899999999999753111
Q ss_pred -----------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 827 -----------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 827 -----------------~p~-----~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+|. ...|.+-.....|++|+++.+++|+++.
T Consensus 322 p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 322 PLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred ccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 121 1345555555678999999999998753
No 359
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=1.5e-13 Score=156.53 Aligned_cols=216 Identities=16% Similarity=0.107 Sum_probs=145.4
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 598 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~~ 598 (946)
.++++.++++.|...+ +...+|..|..++++++. +++|+||+++..|+..... ....|++++.++.+
T Consensus 64 ~~Le~~iA~le~~~~~-~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~ 134 (394)
T PRK09028 64 FAFQAAIVELEGGAGT-ALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM 134 (394)
T ss_pred HHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC
Confidence 3677889999877644 345567666654444431 2568999988766444432 34578888877642
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEe
Q 002263 599 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 677 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~ 677 (946)
|.++++++++ ++|++|++++| |.+|.+. |+++|+++||++|++++||+++.. +...+|.++|+|+++.
T Consensus 135 -----~~e~l~~~l~---~~TklV~lespsNPtg~v~-dl~~I~~la~~~g~~lvvD~t~a~--p~~~~Pl~~GaDivv~ 203 (394)
T PRK09028 135 -----IGEGIRELIR---PNTKVLFLESPGSITMEVQ-DVPTLSRIAHEHDIVVMLDNTWAS--PINSRPFEMGVDISIQ 203 (394)
T ss_pred -----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCccc--cccCCccccCceEEEE
Confidence 5688998886 78999999999 5788887 899999999999999999988643 2356888999999999
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
|+|||++.+ |.--.|.++.++++.+.+-.. + ..++.. .++ --| |+...|-+-+.
T Consensus 204 S~tK~l~Gh---~d~~~G~~~~~~~~~~~l~~~------------~-~~~G~~-~~p-------~~a--~l~~rgl~TL~ 257 (394)
T PRK09028 204 AATKYIVGH---SDVMLGTATANEKHWDQLREH------------S-YLMGQC-TSP-------DDV--YLAMRGLRTLG 257 (394)
T ss_pred eCCeEecCC---CCEEEEEEECCHHHHHHHHHH------------H-HhcCCC-CCH-------HHH--HHHHcccCcHH
Confidence 999999521 111256555444432221100 0 001111 111 123 44555656677
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 002263 758 EASKIAILNANYMAKRLEKH---YPILFRG 784 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~---~~v~~~~ 784 (946)
-+.++..++|..+++.|+++ -.|.|+|
T Consensus 258 lR~~~~~~na~~la~~L~~~p~v~~V~yPg 287 (394)
T PRK09028 258 VRLAQHEKNALKVANWLATRPEVDHVRHPA 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 77888899999999999986 3455665
No 360
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.58 E-value=9.7e-14 Score=158.95 Aligned_cols=279 Identities=14% Similarity=0.126 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 176 (946)
..+.|+|+..|+++|++.+.+ +++|.|++..++.+|.. . +||+||+++++|.|+...+-. .|...+++.+
T Consensus 70 G~i~eAqe~aA~~fgAd~tyF-vvNGTS~ank~vi~a~~-~--~GD~VLvdRN~HKSi~~glil----aGa~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYF-VVNGTSTANKAVINAVL-T--PGDKVLVDRNCHKSIHHGLIL----AGATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEE-EECCccHHHHHHHHhhc-C--CCCEEEecCCccHHHHHHHHH----cCCceEEecCCC
Confidence 467899999999999997654 67888888888888764 3 899999999999999988531 3666666543
Q ss_pred ------------ccccc--c-CCCE-eEEEEEcCCCceeecchHHHHHHHHhCCcEEEEE-ecCc---cccCCCC-CCCc
Q 002263 177 ------------KDIDY--K-SGDV-CGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLL---ALTILKP-PGEL 235 (946)
Q Consensus 177 ------------~~l~~--i-~~~t-~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~-a~~~---al~~l~~-~~~~ 235 (946)
+.+++ + .++. +++++|+|+++|++.|+++|.+.+|..++++.++ ++.. -.+.++. ..+.
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 23333 2 3456 8999999999999999999999999999999992 2221 1122222 2347
Q ss_pred cceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 236 GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 236 GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
|+|+++.|.||...-+ -.+.++++++. +.+. .++ -+.+|.+ .-|+++.|
T Consensus 222 ~~~~~tqS~HK~l~al----SQaS~iHv~~~--~~~~-------~~r-~nea~~~-----------------h~STSPsY 270 (557)
T COG1982 222 GADFVTQSTHKLLAAL----SQASMIHVKDG--RAVN-------HER-FNEALMM-----------------HQSTSPSY 270 (557)
T ss_pred CceEEEechhhhhhhh----hhhHHHhhCCC--ccCC-------HHH-HHHHHHH-----------------HccCCchH
Confidence 9999999995543222 24567777653 1221 000 0111211 12346677
Q ss_pred HHHHHHH--HHHhChhhHHH---HHHHHHHHHHHHHHHHhcCCCEEEcCCC-------------------CcCe--EEEe
Q 002263 316 ANMAAMY--AVYHGPEGLKT---IAQRVHGLAGTFALGLKKLGTVEVQGLP-------------------FFDT--VKVK 369 (946)
Q Consensus 316 a~~aa~y--~~~~g~~Gl~~---i~~~~~~~a~~l~~~L~~~g~~~~~~~~-------------------~~~~--~~i~ 369 (946)
.++|++- ..+.+..|-+- ..+...+..+++++..++++++.++.+. .+|. ++|.
T Consensus 271 ~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~ 350 (557)
T COG1982 271 PLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTIT 350 (557)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEe
Confidence 7787772 23444555332 2555667777888888877558776432 1243 5666
Q ss_pred cC--C--HHHHHHHHHHcCCeeeeecCC--eEEEEeccCCCHHHHHHHHHHHh
Q 002263 370 CA--D--AHAIASAAYKIEMNLRVVDSN--TVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 370 ~~--~--~~~v~~~L~~~GI~~~~~~~~--~lris~~~~~t~edid~ll~~l~ 416 (946)
.+ + +..|.+.|+++||......+. .+.+++.+..+..+++.|++.+.
T Consensus 351 tp~~Gipg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 351 TPEFGIPGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred cCCCCCcHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 54 3 789999999999988766543 45556666677888899988886
No 361
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.58 E-value=7.2e-14 Score=158.66 Aligned_cols=293 Identities=12% Similarity=0.066 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCE
Q 002263 519 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 591 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~ 591 (946)
.+++.+.++.+++++|.+. +.+..++|+.+..+++..+ . .++ .+.+.|++ . .+.. .++..|++
T Consensus 43 ~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l---~-~~~-~~~~~i~~--g---~~~~~~~~~a~~~g~~ 112 (355)
T cd00611 43 EAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL---L-GDK-GTADYVVT--G---AWSAKAAKEAKRYGGV 112 (355)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc---C-CCC-CeEEEEEC--C---HHHHHHHHHHHhcCCC
Confidence 4678899999999999742 3355565776654443332 1 122 13444433 2 2333 45778999
Q ss_pred EEEEcCCCCCCC-C-HHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC
Q 002263 592 IVSVGTDAKGNI-N-IEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 592 vv~v~~~~~g~~-D-~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg 668 (946)
++.++++++|.. + ++..+..++ ++++.|.+++- |.+|+.. . ++++.+|++++||+++..+...+ ...
T Consensus 113 ~~~~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~---~---~i~~~~g~~~~VDa~qs~g~~~i-dv~ 182 (355)
T cd00611 113 VVIVAAKEEGKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEF---D---EVPDTGGVPLVADMSSNILSRPI-DVS 182 (355)
T ss_pred cEEEecccccCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEc---c---eecccCCCeEEEEccccccCCCC-CHH
Confidence 999998765433 4 233333343 78888888876 5688863 2 34455999999999875332221 223
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC---CCCCCCCCCCcccCccchhhHHHHHH
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~---~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
+++ ++..+.||+|+ | ||+|++++++++...++...... .++. .......|+++. .+....
T Consensus 183 ~~~--~~~ss~~K~lG-P-----~G~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Tpn~~--------~i~~L~ 245 (355)
T cd00611 183 KFG--VIYAGAQKNLG-P-----AGVTVVIVRKDLLGKARKITPSM-LNYKTHADNNSLYNTPPTF--------AIYMMG 245 (355)
T ss_pred HhC--EEEeecccccC-C-----CceEEEEECHHHHhhcccCCCCc-ccHHHHHhcCCCCCCChHH--------HHHHHH
Confidence 344 55566899773 3 68999999987665544321100 0110 000011222221 122334
Q ss_pred HHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhccCCeeeccC---CCceeeeEEEecccccccCCC-CHHHHHHHHHHCCc
Q 002263 746 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPILFRGV---NGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGF 820 (946)
Q Consensus 746 a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~---~~~~~~e~v~~~~~~~~~~g~-~~~~i~~~L~~~Gi 820 (946)
+.+..+-++ |+.++.++...+++++.++|+++..+ +.+. .......+.|.+. +. ...++.+.+.+.|+
T Consensus 246 aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl-~~~~~~~~~rs~~vvsf~~~------~~~l~~~~~~~~~r~G~ 318 (355)
T cd00611 246 LVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF-YRGPVDKRARSRMNVPFRLG------KEELEKEFLKEAEAAGM 318 (355)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc-cccCCCHHHcCceEEEEEcC------ChhhhHHHHHHHHHCCC
Confidence 556666666 68888888999999999999976232 1110 1111112334433 21 12455567778999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+++...- ..+++|+++...+|++|||+|+++|+++
T Consensus 319 ~~~~~~~-~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 319 IGLKGHR-SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cccCCCc-ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 8654321 2489999999999999999999999885
No 362
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=7.8e-13 Score=153.34 Aligned_cols=322 Identities=14% Similarity=0.186 Sum_probs=194.4
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCC---CcccccCCchHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF---DSFSLQPNAGAAGEYAGLMVI 556 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~---~~~~l~~~sGa~ge~a~l~a~ 556 (946)
..+|++.+++..++..+. ....+..+ .+.+ .+...++.+.|+++++. +. .++.++|+.++++++..+
T Consensus 52 ~~lGh~~p~v~~ai~~ql-~~~~~~~~-~~~~-------~~~~~~la~~l~~~~p~~~~~~-~~f~~sGseA~e~AlklA 121 (421)
T PRK06777 52 LNTGHRHPKVVAAVRQQL-DQFTHTAY-QIVP-------YASYVTLAERINALAPIDGPAK-TAFFTTGAEAVENAVKIA 121 (421)
T ss_pred hccCCCCHHHHHHHHHHH-hhcccccc-cccC-------ChHHHHHHHHHHHhCCCCCCce-EEEeCCcHHHHHHHHHHH
Confidence 356888777666666553 21111111 0001 12234677888888753 33 355689999998888888
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE-------------EEEEcCCCC--C---CCCHHHHHHHHHh--c
Q 002263 557 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-------------IVSVGTDAK--G---NINIEELRKAAEA--N 615 (946)
Q Consensus 557 r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~-------------vv~v~~~~~--g---~~D~e~L~~~i~~--~ 615 (946)
|.|. +|++|+ ...++||....+..+.|.. +..++.... + ..|++++++.+++ +
T Consensus 122 r~~t------gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 122 RAYT------GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHhh------CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 8762 345566 5678999988776554421 222332211 1 1246778888864 3
Q ss_pred CCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc------cC--CCEEEeCCCccc
Q 002263 616 RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTF 683 (946)
Q Consensus 616 ~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~------~G--aDi~~~s~hK~f 683 (946)
.+++++|+++.. +..|+..+ .+++|.++|++||+++++|.++. |+.+.|. +| +|++++ .|.+
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t----g~gr~g~~~~~~~~~~~pDiv~~--sK~l 269 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT----GFARTGKLFAMEYYDVKPDLITM--AKSL 269 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh----CCccCCchhhhhhcCCCCCEEee--ehhh
Confidence 467888887643 34565432 49999999999999999998753 3433332 23 687764 4777
Q ss_pred ccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHH
Q 002263 684 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 763 (946)
Q Consensus 684 ~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~ 763 (946)
+ ||..+|.+++++++.+.+.... ..+. +.++...++++.+.|..+..+.+ .++.
T Consensus 270 ~-----~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~~~p~~~aaa~a~L~~~~~~~l---~~~~ 323 (421)
T PRK06777 270 G-----GGMPISAVVGRAEVMDAPAPGG--------------LGGT----YAGNPLAVAAALAVLDVIAEEKL---CQRA 323 (421)
T ss_pred c-----CCCceEEEEEcHHHHhccCCCC--------------CCCC----CCcCHHHHHHHHHHHHHHHhccH---HHHH
Confidence 3 4567899999888766543110 0011 22345556667777777655544 3445
Q ss_pred HHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCC----HHHHHHHHHHCCcccCCC-CCCCCCEE
Q 002263 764 ILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE----PEDVAKRLMDYGFHGPTM-SWPVPGTL 833 (946)
Q Consensus 764 ~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~----~~~i~~~L~~~Gi~~~~~-~~p~~~~l 833 (946)
..+.++|.++|++. +.+. ..| .|.++ -+.++.+. .+.+ ...+.+.|.++|+.+... .+ ++++
T Consensus 324 ~~~g~~l~~~L~~l~~~~~~i~~vrg-~G~~~-~i~~~~~~----~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~l 395 (421)
T PRK06777 324 LILGAHLVEVLEKAKASCPAIVDIRA-RGSMV-AVEFNDPQ----TGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVI 395 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEecC-ceEEE-EEEEecCc----cCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEE
Confidence 56788888888764 2221 222 23222 11122111 1111 345666678899986422 22 4789
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 834 MIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 834 ri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
|+.|....|++++|+.++.|.+.+
T Consensus 396 r~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 396 RFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999998775
No 363
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=2.9e-13 Score=156.90 Aligned_cols=152 Identities=23% Similarity=0.253 Sum_probs=122.0
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---c
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~ 178 (946)
.++++.+|++.|.+. +.++.+|++++++++.++ .. +||+||++...|+.+...+...++..|++++++|.. +
T Consensus 66 ~~le~~lA~l~g~~~--al~~~SG~~Ai~~al~al-l~--pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (427)
T PRK05994 66 AVLEERVAALEGGTA--ALAVASGHAAQFLVFHTL-LQ--PGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPAS 140 (427)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 456789999999876 778899998888777665 33 899999999999988887766566789999998764 4
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +.++.+....|-++|+|+++.|+ |.+++| ||
T Consensus 141 l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~pl~~gaDivv~S~tK~lgg~---~~ 216 (427)
T PRK05994 141 FERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVD-NTLASPYLIRPIEHGADIVVHSLTKFLGGH---GN 216 (427)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCcEEEEcCccccCCC---CC
Confidence 555 7789999999988 78999999999999999999999994 34455555667789999999998 766533 34
Q ss_pred CceEEEE
Q 002263 256 PHAAFLA 262 (946)
Q Consensus 256 P~~g~l~ 262 (946)
+-+|++.
T Consensus 217 ~~gG~v~ 223 (427)
T PRK05994 217 SMGGIIV 223 (427)
T ss_pred cEEEEEE
Confidence 4455554
No 364
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.58 E-value=8.9e-14 Score=157.91 Aligned_cols=315 Identities=16% Similarity=0.184 Sum_probs=184.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCC-cce--eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNK-VYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 103 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~-~~~--~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e 103 (946)
..+| +++.+.+++++.+.+.-.... .+. .|.|.-.-+.-.++.+.+.+.. .+.. ..+..+.+....++-.+
T Consensus 10 ~~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~---~~n~-n~~~~~~~P~~~~~E~~ 83 (373)
T PF00282_consen 10 EELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLAS---ALNQ-NGFTWEASPAATEIERE 83 (373)
T ss_dssp CCHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHH---HHT--BTTSTTTSHHHHHHHHH
T ss_pred cccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHh---hhcc-cccccccccccccchHH
Confidence 4566 567789999999987644332 221 2333322121123333322221 1111 23333455566667778
Q ss_pred HHHHHHHHhCCCC-------cceEEcccHHHHHHHHHHHhccc-------cC----CCCEEEEcCCCCHHHHHHHHHhhc
Q 002263 104 FQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ-------KG----KKKTFIIASNCHPQTIDICITRAD 165 (946)
Q Consensus 104 ~q~~la~L~g~~~-------~~~sl~~~~Ta~~ea~~la~~~~-------~~----~gd~vvv~~~~Hps~~~~~~~~a~ 165 (946)
.-+++++|+|++. +...+++|||.+.-..+++.|.. ++ ++-.|++++..|.|+.+.+.-
T Consensus 84 vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~--- 160 (373)
T PF00282_consen 84 VIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI--- 160 (373)
T ss_dssp HHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH---
T ss_pred HHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce---
Confidence 8899999999983 34668889986655444443311 01 123688999999999888653
Q ss_pred CCCeEEEEeccc--------cccc-cC-----CCEe-EEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC
Q 002263 166 GFDIKVVVSDLK--------DIDY-KS-----GDVC-GVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL 229 (946)
Q Consensus 166 ~~gi~v~~~~~~--------~l~~-i~-----~~t~-~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l 229 (946)
.|+.++.|+.+ +|++ +. ..+. +|+.+.+ +.+|.++|+++|+++|++++++++|++..-+...+
T Consensus 161 -lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~ 239 (373)
T PF00282_consen 161 -LGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALL 239 (373)
T ss_dssp -TTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGG
T ss_pred -eeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccc
Confidence 46667777653 3544 31 2233 5667777 56999999999999999999999996533221112
Q ss_pred CC------CCCccceEEEecc-ccccccCCCCCCceEEEEEchhh-hh-cC--CCceEeEeecCCCCcceEEeccccccc
Q 002263 230 KP------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KR-MM--PGRIVGVSIDSSGKPALRVAMQTREQH 298 (946)
Q Consensus 230 ~~------~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~-~~-~l--p~~~~G~s~d~~g~~~~~l~l~tre~~ 298 (946)
.+ .+--+||-+..+. |+++.|++ .|++.+|++. ++ .+ ....++-. +......+
T Consensus 240 ~~~~~~~~~gi~~adSit~d~HK~l~~P~~-----~~~~l~r~~~~l~~~~~~~~~Yl~~~-~~~~~~~~---------- 303 (373)
T PF00282_consen 240 SPEYRHLLFGIERADSITIDPHKWLGVPYG-----CGVLLVRDKSDLRDAFSINADYLGND-DRESDESY---------- 303 (373)
T ss_dssp HCTTGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S--SSS-GGG----------
T ss_pred cccccccccccccccccccchhhhhcCCcc-----ceeEEeecccchHHHhccChhhhccc-cccccccc----------
Confidence 11 1224689999999 77777864 6788888742 22 22 11111100 00000000
Q ss_pred ccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEec
Q 002263 299 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC 370 (946)
Q Consensus 299 irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~ 370 (946)
..++..+.......++-.-+.+..+|.+|++++.++..+++++|++.|++.++++++.++.+..|+|+.
T Consensus 304 ---~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 304 ---DYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp ---CEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred ---ccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 011111111122223333334588999999999999999999999999999669999888888888864
No 365
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.58 E-value=1.4e-13 Score=157.60 Aligned_cols=297 Identities=17% Similarity=0.164 Sum_probs=192.9
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
+.|.++..++++|.+...+..|+++.|+.+++++.. +++|+||+++..|.++.....+.|+..+.+....+
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~--------~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVINAVL--------TPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhc--------CCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 789999999999999988889999998877777653 36799999999999999999999999988865332
Q ss_pred -----CCCCHHHHHHHHHhcCCCe-EEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccc---ccCC-Ccc
Q 002263 601 -----GNINIEELRKAAEANRDNL-STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTSP-GYI 670 (946)
Q Consensus 601 -----g~~D~e~L~~~i~~~~~~t-~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g---l~~p-g~~ 670 (946)
|.++.+.+++.+.++ ++- +++++++|+++|+.- ++++|.+.+|..++|+.+|.+|..-.+- +..+ -+.
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~-~~~~k~~vitnpTYdGv~~-n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAH-PDAEKLAVITNPTYDGVCY-NLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred cccccCCCCHHHHHHHHHhC-hhhheeEEEecCccceEee-cHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 689999999998765 344 889999999999998 8999999999999999999987532211 1111 236
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH---HHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI---SYTY 747 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~---a~a~ 747 (946)
|+|+++.|.||+++ +..-...|-+++. +.+.-..+. +.-....+||| +..+++. |-.+
T Consensus 222 ~~~~~tqS~HK~l~-----alSQaS~iHv~~~--~~~~~~r~n----------ea~~~h~STSP--sY~l~ASlD~Ar~~ 282 (557)
T COG1982 222 GADFVTQSTHKLLA-----ALSQASMIHVKDG--RAVNHERFN----------EALMMHQSTSP--SYPLMASLDVARMQ 282 (557)
T ss_pred CceEEEechhhhhh-----hhhhhHHHhhCCC--ccCCHHHHH----------HHHHHHccCCc--hHHHHHHHHHHHHh
Confidence 89999999999984 2223334444432 111100000 00000112222 2222222 2222
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-------------------CceeeeEEEecccccccCCC
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-------------------GTVAHEFIVDLRGLKNTAGI 806 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~-------------------~~~~~e~v~~~~~~~~~~g~ 806 (946)
...-|++-.++.....++.++++++..+++ +.+..+... +|+ .+++..+ +.|+
T Consensus 283 ~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~--Klti~tp----~~Gi 356 (557)
T COG1982 283 EGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPT--KLTITTP----EFGI 356 (557)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceecccc--EEEEecC----CCCC
Confidence 223333223333555666677777766654 333222110 111 1223322 3589
Q ss_pred CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 807 EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 807 ~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
++.++++.|.++|+...... .....+.+++.+..+...++++++.++
T Consensus 357 pg~~v~~~L~e~gii~e~~~-d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 357 PGAIVAKYLREHGIIPEETG-DYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred cHHHHHHHHHHcCCeeeecC-CceeeEEeeeccchHHHHHHHHHHHHH
Confidence 99999999999999864332 112456666665455567777777777
No 366
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=5.2e-13 Score=153.60 Aligned_cols=273 Identities=15% Similarity=0.127 Sum_probs=178.5
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|.+. ..++.+|++++..+++++ .. +||+|+++...|+.+...++..++..|++++.++. ++
T Consensus 63 ~~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~al-l~--pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 63 DLLGEALAELEGGAG--GVITATGMGAINLVLNAL-LQ--PGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred HHHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHH-hC--CCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 446689999999754 567788887777666655 33 89999999999998877777666678999998876 34
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|+ |.|++|- +
T Consensus 138 l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD-~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~---~ 213 (405)
T PRK08776 138 LADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVD-NTFLSPALQKPLEFGADLVLHSTTKYINGHS---D 213 (405)
T ss_pred HHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCCcccccCCcccccCCEEEecCceeecCCC---C
Confidence 555 7788999999998 78999999999999999999999994 33444444567789999999998 7776431 1
Q ss_pred CceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
--+|.+.++ +++.+++-. .+...| .+ .+++- .|+...|.+-++..
T Consensus 214 ~~~G~vv~~~~~l~~~l~~-------------------------~~~~~g---~~-~s~~~-----a~l~~~gl~tl~~r 259 (405)
T PRK08776 214 VVGGAVVARDAELHQQLVW-------------------------WANALG---LT-GSPFD-----AFLTLRGLRTLDAR 259 (405)
T ss_pred ceEEEEEeCCHHHHHHHHH-------------------------HHHhcC---CC-CCHHH-----HHHHHhhhCcHHHH
Confidence 124666554 444333200 000001 11 01211 11233444556667
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CcCeEEEecCC----HHHHHHHHHH--cCCeee---
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR--- 388 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~-~~~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~--~GI~~~--- 388 (946)
.++..+++..+.+.|++...+. |..+ + +..-|+|.+++ +.++.+.|.= .+..+.
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 339 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVE 339 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEccCCCCCc
Confidence 7788899999999999875353 2210 0 11246777654 2344444442 122210
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 389 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ +.++.||+|++.-+.++=|++|-++|..
T Consensus 340 sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 340 SLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred eEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 0 1246799999987766666777777753
No 367
>PRK06460 hypothetical protein; Provisional
Probab=99.57 E-value=7.6e-13 Score=151.13 Aligned_cols=213 Identities=21% Similarity=0.224 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc-
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 178 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~- 178 (946)
...++++.+|+++|.+. ..++.+|++++.+++.++ .. +||+||++...++.+...+...++..|++++.++.++
T Consensus 46 ~~~~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al-~~--~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~ 120 (376)
T PRK06460 46 TVLELTKKIVELENAEM--GVAFSSGMGAISTTALAL-LK--PGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD 120 (376)
T ss_pred cHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH
Confidence 44567789999999876 456677887776666655 23 8999999988886666665555667899999887643
Q ss_pred --ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 179 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 179 --l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+....+.++|+|+++.|. |+|++ .
T Consensus 121 ~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivD-ea~~~~~~~~~l~~~~divv~S~sK~l~G---~ 196 (376)
T PRK06460 121 NIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVD-ATFSTPINQKPLELGADIVVHSASKFLAG---H 196 (376)
T ss_pred HHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCcCccccCChhhcCCCEEEeecceeccC---C
Confidence 334 4678999999998 67999999999999999999999994 33333333334467899999998 87742 2
Q ss_pred CCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 254 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 254 GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
|+.-+|++..++++.+++.. .++.. +++. ++. ..|+...+.+-++.
T Consensus 197 ~~~~~G~~~~~~~l~~~l~~-------------------------~~~~~---g~~~-~~~-----~a~~~l~~~~~l~~ 242 (376)
T PRK06460 197 NDVIAGLAAGYGKLLNVIDQ-------------------------MRRTL---GTSL-DPH-----AAYLTLRGIKTLKI 242 (376)
T ss_pred CCceEEEEecCHHHHHHHHH-------------------------HHHhc---CCCC-CHH-----HHHHHHhchhhHHH
Confidence 22336888887776654410 00111 1111 111 12334445566777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCE
Q 002263 334 IAQRVHGLAGTFALGLKKLGTV 355 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~ 355 (946)
..+++.+++.++++.|++.+.+
T Consensus 243 r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 243 RMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 7888899999999999987434
No 368
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.57 E-value=2.2e-13 Score=156.63 Aligned_cols=216 Identities=16% Similarity=0.221 Sum_probs=144.6
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+.+ .++|+.+..+++++. . +++++|+++...++.+... +...|++++.++.
T Consensus 67 ~~~Le~~lA~l~G~~~~~~-~~sG~~Ai~~~l~~~---l-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 137 (398)
T PRK07504 67 VDMFEKRMCALEGAEDARA-TASGMAAVTAAILCQ---V-----KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG 137 (398)
T ss_pred HHHHHHHHHHHhCCCeeeE-ecCHHHHHHHHHHHH---h-----CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC
Confidence 4578899999999987644 456766553333221 1 2568999998876654433 3457999988862
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +.+..|.++|+|+++
T Consensus 138 -----~d~e~l~~ai~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~gi~lvvD~a~a~--~~~~~~~~~gaDivv 206 (398)
T PRK07504 138 -----LDLDNWEKAVR---PNTKVFFLESPTNPTLEVI-DIAAVAKIANQAGAKLVVDNVFAT--PLFQKPLELGAHIVV 206 (398)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCcEec-CHHHHHHHHHHcCCEEEEECCccc--cccCCchhhCCCEEE
Confidence 78999999996 789999999995 689888 799999999999999999998643 233467778999999
Q ss_pred eCCCcccccCCCCCCCcc-eeEEEecccCC-CCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 677 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~-G~i~~~~~l~~-~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
.|+||+|+. .|..+ |+++.++++.. .+.... + ..+. +.+ . ..||..+ -|-+
T Consensus 207 ~S~sK~l~g----~g~~~GG~vv~~~~~i~~~~~~~~-----------~--~~g~-~~s----~---~~A~~~l--~~L~ 259 (398)
T PRK07504 207 YSATKHIDG----QGRCLGGVVLSDKAWIEEHLQDYF-----------R--HTGP-SLS----P---FNAWTLL--KGLE 259 (398)
T ss_pred eeccccccC----CccceEEEEEeCcHHHHHHHHHHH-----------H--HhCC-CCC----H---HHHHHHH--hccc
Confidence 999999852 23444 46666654332 111000 0 0000 101 1 1233333 3334
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 002263 755 GLTEASKIAILNANYMAKRLEKH---YPILFRG 784 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~---~~v~~~~ 784 (946)
-+..+.++..+++..+++.|+++ -.|.|+|
T Consensus 260 tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~ 292 (398)
T PRK07504 260 TLPVRVRQQTESAAAIADFLAGHPKVARVIYPG 292 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCC
Confidence 45566677779999999999875 2455655
No 369
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.57 E-value=7.7e-13 Score=151.13 Aligned_cols=265 Identities=14% Similarity=0.095 Sum_probs=175.9
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 176 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~----- 176 (946)
.++++.+|+++|.++.++.+++|++.++..++.++ .. +||+|++++..|+.+...+ +..|++++.++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-~~--~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 142 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAY-LG--PGDEVIYSEHGFAVYPIAA----QAVGAKPVEVPAKDYGH 142 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-cC--CCCEEEEecCCHHHHHHHH----HHcCCeEEEecccCCCC
Confidence 46778999999998888988888887665554444 22 7899999998887655443 346888888765
Q ss_pred --ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhC--CcEEEEEecCccccCCC---CC----CCccce-EEEe
Q 002263 177 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILK---PP----GELGAD-IVVG 242 (946)
Q Consensus 177 --~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~--gal~~v~a~~~al~~l~---~~----~~~GaD-i~v~ 242 (946)
+++++ +++++++|++.+| |.+|.+.|.+++.++++.. |++++++. ........ .+ .+..-+ ++++
T Consensus 143 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 143 DLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDE-AYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred CHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEEC-cHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 34555 6678899999998 6799999999999999875 88888843 21111110 00 011223 4455
Q ss_pred cc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 243 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 243 s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|. |.||. .|..+||+++++++++.+.. + +.+.++++ . +..++.
T Consensus 222 S~SK~~g~----~G~RiG~l~~~~~~~~~l~~--------------~--------------~~~~~~~~--~--~~~~a~ 265 (367)
T PRK02731 222 TFSKAYGL----AGLRVGYGIAPPEIIDALNR--------------V--------------RQPFNVNS--L--ALAAAV 265 (367)
T ss_pred eehHhhcC----cccceeeeeCCHHHHHHHHH--------------c--------------cCCCCCCH--H--HHHHHH
Confidence 54 77653 24457999998887765510 0 00112221 1 112222
Q ss_pred HHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeeec----CC
Q 002263 322 YAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD----SN 393 (946)
Q Consensus 322 y~~~~g-~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~----~~ 393 (946)
.++. .+-++++.++..++.+++.+.|++.| +.+.. +...-+.+.++. +.++.++|.++||.++... ++
T Consensus 266 --~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 266 --AALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIP-SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred --HHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCC-CCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 2222 33467778888888899999999887 76653 222234455532 7899999999999887542 46
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 002263 394 TVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 394 ~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+|+|++ +.+|+++++++|+.
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~ 362 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKE 362 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHH
Confidence 8999985 78999999999863
No 370
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=6.2e-13 Score=152.12 Aligned_cols=273 Identities=15% Similarity=0.110 Sum_probs=179.6
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|.+ .+.++.+|++++..++.++. . +||+|++++..|+++...+..++...++++..++. ++
T Consensus 55 ~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~-~--~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 129 (386)
T PRK08045 55 DVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFL-K--PGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHc-C--CCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence 34668999999965 48889999988777666542 3 89999999999998888877666667788887764 45
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|| +..+.+....|-++|+|+++.|. |+++++- +
T Consensus 130 l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivD-eay~~~~~~~pl~~gaDivv~S~tK~l~G~~---d 205 (386)
T PRK08045 130 LRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHS---D 205 (386)
T ss_pred HHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCCEEEeecceeccCCC---C
Confidence 555 7778999999998 67999999999999999999999994 33444445567789999999998 7775321 1
Q ss_pred CceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
--.|++.++ +++.+++. +.+....+|. +++ ..|+...|-+-+...
T Consensus 206 ~~~G~vi~~~~~~~~~l~----------------------------~~~~~~g~~~-~p~-----~~~l~~rgl~tl~~R 251 (386)
T PRK08045 206 VVAGVVIAKDPDVVTELA----------------------------WWANNIGVTG-GAF-----DSYLLLRGLRTLVPR 251 (386)
T ss_pred ceeEEEEeCcHHHHHHHH----------------------------HHHHhcCCCC-CHH-----HHHHHHhhhccHHHH
Confidence 114666554 34433220 0000001111 111 113344444556667
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcC----C-C-----------CcCeEEEecCC----HHHHHHHHHHc--CCeee---
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE-VQG----L-P-----------FFDTVKVKCAD----AHAIASAAYKI--EMNLR--- 388 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~-~~~----~-~-----------~~~~~~i~~~~----~~~v~~~L~~~--GI~~~--- 388 (946)
.++..+++..+++.|++.+.++ |.. . + +..-|+|.+++ +.++.+.|+=. +..+.
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~ 331 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVE 331 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCc
Confidence 7888899999999999875353 321 1 1 11246676654 34555555422 22110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 389 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 -----~-----------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ +.++.||+|++.-+.++=+++|.++|..
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 382 (386)
T PRK08045 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_pred eeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 0 1246899999988766667777777753
No 371
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.57 E-value=2.7e-13 Score=157.89 Aligned_cols=290 Identities=16% Similarity=0.237 Sum_probs=174.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcC--CE-------
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG--MK------- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G--~~------- 591 (946)
..++.+.|+++++-....++.++|+.+++++++++|.|. ++++||. ..+.||.......+.+ ..
T Consensus 90 ~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~------gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 163 (423)
T TIGR00713 90 EILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYT------GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTS 163 (423)
T ss_pred HHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEEcCCCCCChhhhhccccCcccccCCCCC
Confidence 346778888877543334678899999988888888762 3466765 5668886554432211 11
Q ss_pred ----------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEe-CCCcccccccC---HHHHHHHHHHcCCEEEEeccc
Q 002263 592 ----------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT-YPSTHGVYEEG---IDEICKIIHDNGGQVYMDGAN 657 (946)
Q Consensus 592 ----------vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt-~Pn~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~ 657 (946)
+..+|. .|+++|+++++++.+++++|++. .|+..|.+.++ +++|.++|++||+++++|.++
T Consensus 164 ~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 238 (423)
T TIGR00713 164 PGVPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM 238 (423)
T ss_pred CCCCcccccceEEeCC-----CCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 122221 38999999998655688888886 56667877632 899999999999999999975
Q ss_pred ccccccccCCC------cc--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 658 MNAQVGLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 658 ~~a~~gl~~pg------~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
. ++ +.| .+ .+|+++ +.|+++ +|..+|++++++++.+.+.... .....+.
T Consensus 239 ~----g~-r~g~~~~~~~~~~~pDi~t--~sK~l~-----~G~pig~v~~~~~i~~~~~~~~-----------~~~~~~T 295 (423)
T TIGR00713 239 T----GF-RVALGGAQEYFGVEPDLTT--LGKIIG-----GGLPVGAFGGRREIMERLAPEG-----------PVYQAGT 295 (423)
T ss_pred c----cc-ccCcchhHHHhCCCcchhh--hhhhhc-----CCCceeeeeEHHHHHHhhCcCC-----------CeeeccC
Confidence 3 33 211 12 357654 357763 4567899999988776553100 0000011
Q ss_pred cccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHh----cc-CCeeeccCCCceeeeEEEecccccc--
Q 002263 730 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE----KH-YPILFRGVNGTVAHEFIVDLRGLKN-- 802 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~----~~-~~v~~~~~~~~~~~e~v~~~~~~~~-- 802 (946)
+.++...++++.+.|..+..+++.+.. ....+++++.|+ +. +.....+. +..+ -+.++....+.
T Consensus 296 ----~~~~~~~~aaa~a~l~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~v~~~-g~~~-~v~~~~~~~~~~~ 366 (423)
T TIGR00713 296 ----LSGNPLAMAAGLATLKLLDEEGVYTEL---DELAKRLAEGLSEVLEDTGIPHTVNRV-GSMF-SLFFTEEEVTNYA 366 (423)
T ss_pred ----CCCCHHHHHHHHHHHHHHhcccHHHHH---HHHHHHHHHHHHHHHHhcCCCeEEEee-ccEE-EEEEecCCCCChh
Confidence 123455566677777777655544332 234445555544 32 22212222 2222 12232211000
Q ss_pred -cCCCC---HHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 803 -TAGIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 803 -~~g~~---~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
....+ ...+.++|.++|+.+....+ +.+++++. .|++||+++++.|.+++++
T Consensus 367 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 367 DAKKSDTELFAKFFHEMLDKGVFLPPSQF---EACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred hhhcccHHHHHHHHHHHHHCCeEEecCCc---cceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 00011 23688899999998764332 46788776 6899999999999988754
No 372
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.57 E-value=1.7e-13 Score=156.13 Aligned_cols=278 Identities=11% Similarity=0.132 Sum_probs=173.4
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.+|.+...+..++|++. +..++++.+. .++++|+++...+..+...+.+.|++++.++.+ ++.
T Consensus 67 ~~Lr~aia~~~~~~~~~I~vt~Gs~e--~i~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~ 138 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQVLCGSGLDE--VIQIISRAVL-----KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGV 138 (366)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCC
Confidence 35778888888988766666666642 3334444432 246889999886666666788999999999985 456
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccccc--cccCC--C--ccCCC
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV--GLTSP--G--YIGAD 673 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~--gl~~p--g--~~GaD 673 (946)
+|+++|+++++ +++++|++++| |.+|.+-+ .+++|+++|++++ ++++|.++..-.. ....+ . ..+--
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~v 214 (366)
T PRK01533 139 YDLDEISSVVD---NDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNI 214 (366)
T ss_pred cCHHHHHHHhC---cCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCE
Confidence 99999999986 67889999999 47999872 2444555555555 6788987631110 00010 0 11123
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
|++.|+.|+|++| |.++|++.+++++.+.+... .. ..+.+ .....++.++|. ..
T Consensus 215 i~~~SfSK~~~l~----GlRiG~~i~~~~~~~~l~~~--------------~~--~~~~~----~~~q~aa~~~l~--~~ 268 (366)
T PRK01533 215 LVLRTFSKAYGLA----SFRVGYAVGHEELIEKLNVV--------------RL--PFNVS----SLAQKAATIAFG--DD 268 (366)
T ss_pred EEEeCchHHhcCh----HHHHhHHhCCHHHHHHHHHh--------------cC--CCCcC----HHHHHHHHHHhC--CH
Confidence 6667788888644 78899998877665443210 00 11111 111112222221 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 832 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~ 832 (946)
+-+++..+...++.+++.+.|+.. +.+ ++ +.+.+ +.++++ +..++.+.|.++||.+.. | +++
T Consensus 269 ~~~~~~~~~~~~~r~~~~~~l~~~g~~~-~~-~~~nf---~~~~~~--------~~~~~~~~l~~~GI~Vr~--~--~~~ 331 (366)
T PRK01533 269 EFIEEIVRVNTEGLRQYESFCKENEIPF-YQ-SQTNF---IFLPVE--------NGGEIYEACAHAGFIIRP--F--PNG 331 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcc-CC-CcCcE---EEEeCC--------CHHHHHHHHHHCCcEEcc--C--CCc
Confidence 223344444455666677777654 333 22 22322 445542 357899999999999875 3 478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 833 LMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 833 lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+||++ .+.+|+++|+++|+++++
T Consensus 332 iRis~---~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 332 VRITV---GTREQNEGVISVLQQHFE 354 (366)
T ss_pred eEEeC---CCHHHHHHHHHHHHHHHH
Confidence 99997 568999999999987754
No 373
>PRK07046 aminotransferase; Validated
Probab=99.57 E-value=2.7e-13 Score=157.99 Aligned_cols=329 Identities=16% Similarity=0.138 Sum_probs=196.9
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
..+|++.+++..++..+. ....+..+ + .+...++.+.++++++++.+ .+.++|+.++++++..+|.|
T Consensus 87 ~~lGh~~p~i~~Av~~q~-~~~~~~~~-~----------~~~~~~lAe~l~~~~~~~~v-~F~nSGtEA~e~AlrlAR~~ 153 (453)
T PRK07046 87 AMFGHSPAPVARALAEQA-RRGLTTML-P----------SEDAAWVGEELARRFGLPYW-QVATTATDANRFVLRWARAV 153 (453)
T ss_pred cccCCCCHHHHHHHHHHH-HhCCCCCC-C----------CHHHHHHHHHHHHHhCCCEE-EEECCHHHHHHHHHHHHHHh
Confidence 346777777666666553 21111110 1 12345788889998886654 56789998888888777776
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHHHHHH------------cCC------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeE
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPATAAM------------CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLS 620 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~~a~~------------~G~------~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~ 620 (946)
++|++|+ ...++||.+...... .|. .+..+|. .|++++++.+. .++++
T Consensus 154 ------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~--~~~vA 220 (453)
T PRK07046 154 ------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAALA--DGDVA 220 (453)
T ss_pred ------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHHhC--CCCeE
Confidence 2466776 567899987554221 111 1222232 38999999995 36788
Q ss_pred EEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccc--cccccccCCCccCCCEEEeCCCcccccCCCCCCCcc
Q 002263 621 TLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANM--NAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGM 694 (946)
Q Consensus 621 ~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~--~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~ 694 (946)
+|++..- ...|.+.+ .++++.++|+++|+++|+|.++. .+++|...--..-+|++++ .|.++ +|-| +
T Consensus 221 avi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t~--gK~lg----gG~P-i 293 (453)
T PRK07046 221 AVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLVV--GKPIA----GGVP-C 293 (453)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccceee--hhhhc----CCCc-c
Confidence 8888743 34577653 38999999999999999999864 2333321101123799876 48774 4434 8
Q ss_pred eeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHH
Q 002263 695 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 774 (946)
Q Consensus 695 G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L 774 (946)
|.+++++++++.+.... .. .........+.+.|+.+.++++.+.|..+-++++. ++.....++|+++|
T Consensus 294 ~av~g~~~i~~~~~~~~--~~-------~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~---~~~~~~g~~l~~~L 361 (453)
T PRK07046 294 AVYGFSAELAERAQAAK--AS-------APPGHSGIGTTLSANALAMAAMRATLAEVMTEAAY---AHMLALAARLAAGL 361 (453)
T ss_pred eeeeehHHHHHHHhhcc--cc-------CCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHHHH
Confidence 88888877665442100 00 00000011222456777788888898888655443 34446677888888
Q ss_pred hcc---CC--eeeccCCCceeeeEEEecccccc----cCCCC---HHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCC
Q 002263 775 EKH---YP--ILFRGVNGTVAHEFIVDLRGLKN----TAGIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 842 (946)
Q Consensus 775 ~~~---~~--v~~~~~~~~~~~e~v~~~~~~~~----~~g~~---~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t 842 (946)
+++ +. ..+.|. +.. ..+.++...... ....+ ...+...|.++|+++.. ..+.++++|+ +|
T Consensus 362 ~~l~~~~~~~~~v~g~-G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~~~~~~~~p~--~t 433 (453)
T PRK07046 362 RAVIARHGLPWHVTRV-GAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP----FHNMMLVCPA--TT 433 (453)
T ss_pred HHHHHhCCCCeEEEEe-CcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec----ccCcEEEeCC--CC
Confidence 753 22 223332 222 123332111000 00001 23567778899998642 2356778875 79
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002263 843 KEELDRYCDALISIREEIA 861 (946)
Q Consensus 843 ~~eid~~~~aL~~i~~e~~ 861 (946)
++|||++++++.++++++.
T Consensus 434 ~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 434 AADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999987653
No 374
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=8.8e-13 Score=138.34 Aligned_cols=334 Identities=18% Similarity=0.254 Sum_probs=216.2
Q ss_pred HHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCCccc
Q 002263 460 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS 539 (946)
Q Consensus 460 e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~ 539 (946)
|-.+|+.-|+.- +.+..|+|.+++-.+...+. ..- ..+.--| +.....++.+.+.+++|++.+
T Consensus 57 eGk~ylDflsay------saVnqGhchpki~~aLqeq~-~kL-tlssraf--------Ynd~~~~f~~~vt~lf~~~kv- 119 (427)
T KOG1402|consen 57 EGKEYLDFLSAY------SAVNQGHCHPKIIKALQEQA-DKL-TLSSRAF--------YNDVLGEFAEYVTKLFGYDKV- 119 (427)
T ss_pred Cccchhhhhhhh------hhcccCCCCHHHHHHHHHHH-hHh-hhhhHHH--------hhhhHHHHHHHHHHhcCccee-
Confidence 344666655542 23457899887766555552 100 0000001 234566888999999999975
Q ss_pred ccCCchHHHHHHHHHHHHHHH-HhcCCCCCC-EEE-EcCCCCCCCHHHHH---------HcC----CEEEEEcCCCCCCC
Q 002263 540 LQPNAGAAGEYAGLMVIRAYH-KARGDHHRN-VCI-IPVSAHGTNPATAA---------MCG----MKIVSVGTDAKGNI 603 (946)
Q Consensus 540 l~~~sGa~ge~a~l~a~r~y~-~~~G~~~~~-~Il-i~~saHg~~~~~a~---------~~G----~~vv~v~~~~~g~~ 603 (946)
+-.|.|+.|.++++..+|.|. ..++..+.. +|+ .-.+.||....+.. .+| ..+..||+ -
T Consensus 120 lpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~ 194 (427)
T KOG1402|consen 120 LPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----G 194 (427)
T ss_pred eecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----C
Confidence 446788888888888888643 234443232 333 34677875544322 122 12455565 3
Q ss_pred CHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------C
Q 002263 604 NIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------G 671 (946)
Q Consensus 604 D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------G 671 (946)
|.++|+.+++ .++.++.|+..- ...|++-| .++++.++|.+|+++++.|.. +.|+.+.|++ -
T Consensus 195 d~eale~~l~--~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEv----QTGl~RTGk~la~d~env~ 268 (427)
T KOG1402|consen 195 DAEALEVALK--SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEV----QTGLARTGKLLACDYENVR 268 (427)
T ss_pred CHHHHHHHhc--CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhh----hhcccccCcEEEeehhhcC
Confidence 8999999998 488998888754 46788864 499999999999999999985 6788888864 4
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCC-CCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~l-p~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
+|++.+ .|.|+ ||--.+..+.++++++-.+ ||. ++ +. +.|+.+.++.+.+.|..
T Consensus 269 PDivil--gKalS----GG~~Pvsavl~~~~im~~~~pge----------Hg-----sT----yggNpLg~~vaiAalev 323 (427)
T KOG1402|consen 269 PDIVIL--GKALS----GGVYPVSAVLADDDIMLNIKPGE----------HG-----ST----YGGNPLGCAVAIAALEV 323 (427)
T ss_pred CCeEEE--ecccc----CCeeeeEEEEecHHHHhccCCCc----------cc-----cc----cCCChHHHHHHHHHHHH
Confidence 799887 48885 3333455555565544332 332 11 11 23455666667777887
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc---C-Ce--eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH---Y-PI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 824 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~---~-~v--~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~ 824 (946)
+-++-+. +++..+...|+++|.++ + .+ ...|. | .++-.+|+.. ++.+.++.+++-+|.++|..+.+
T Consensus 324 i~eekL~---era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-G-l~~ai~i~~~---~~~~~~aw~~cl~lk~~g~LAkp 395 (427)
T KOG1402|consen 324 IVEEKLV---ERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-G-LLNAIVINPS---KTSGQDAWDVCLALKENGLLAKP 395 (427)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHhccccccchhheeecc-c-eEEEEEeccc---cccchhHHHHHHcccccccccCC
Confidence 7776444 44556777888888875 2 11 12232 2 3333445432 12467889999999999999854
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 825 MSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 825 ~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.. .+.+|+.|+..++++|+++-++++.+.+
T Consensus 396 tH---~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 396 TH---GNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred CC---CCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 33 4689999999999999999999988764
No 375
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=4.8e-13 Score=154.69 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~ 596 (946)
...++++.++++.|.+.. +..++|+.+..++++++ . +++++||++...|+.+.. .+...|++++.++
T Consensus 70 t~~~le~~la~l~g~~~~-v~fsSG~~Ai~~al~~l---l-----~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (437)
T PRK05613 70 TVEALENRIASLEGGVHA-VAFASGQAAETAAILNL---A-----GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE 140 (437)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHh---c-----CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC
Confidence 356788999999998643 55566765554333332 1 256889998887776632 2466899999997
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
++ .|+++++++++ ++|++|++..| |.+|.+. ||++|+++||++|++++||+++. .+.+..|-++|+|++
T Consensus 141 -~~---~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~-di~~I~~la~~~gi~livD~t~a--~g~~~~p~~~GaDiv 210 (437)
T PRK05613 141 -NP---DDPESWQAAVQ---PNTKAFFGETFANPQADVL-DIPAVAEVAHRNQVPLIVDNTIA--TAALVRPLELGADVV 210 (437)
T ss_pred -CC---CCHHHHHHhCC---ccCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCeEEEECCCc--cccccChHHhCCCEE
Confidence 32 28999999997 78988888777 6778887 89999999999999999999864 333457778899999
Q ss_pred EeCCCcccc
Q 002263 676 HLNLHKTFC 684 (946)
Q Consensus 676 ~~s~hK~f~ 684 (946)
++|+||+++
T Consensus 211 v~S~~K~l~ 219 (437)
T PRK05613 211 VASLTKFYT 219 (437)
T ss_pred Eeeccceec
Confidence 999999884
No 376
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.57 E-value=4.8e-13 Score=154.71 Aligned_cols=308 Identities=14% Similarity=0.128 Sum_probs=186.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++++.+|.+ ..++..++| ++|...+ ++... ++++.|++++..++.+...+...|.+
T Consensus 69 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~---~~~~~-----~~gd~vl~~~p~y~~y~~~~~~~~~~ 140 (402)
T PRK06107 69 VNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLA---LMATL-----EAGDEVIIPAPYWVSYPDMVLANDGT 140 (402)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH---HHHhc-----CCCCEEEEecCCCcCHHHHHHHcCCE
Confidence 3577777778888888888874 334445555 4444322 22221 25688999998888888888888999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHc-CCEEEEecccccc-cccc
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDN-GGQVYMDGANMNA-QVGL 664 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~-g~ll~vD~a~~~a-~~gl 664 (946)
++.++++.+ +.+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++ |+++++|.++..- +.+-
T Consensus 141 ~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~ 217 (402)
T PRK06107 141 PVIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE 217 (402)
T ss_pred EEEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC
Confidence 988888642 4689999999986 68889999999 5789775 2578889999998 9999999876310 1110
Q ss_pred cCC--Cc----c-CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 665 TSP--GY----I-GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 665 ~~p--g~----~-GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
..| .. + +--++..+++|+|+.| |-++|++.+++++...+... ......+.+...+
T Consensus 218 ~~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~s~~~q 279 (402)
T PRK06107 218 PTPHLLAAAPELRDRVLVTNGVSKTYAMT----GWRIGYAAGPADLIAAINKL--------------QSQSSSCPSSISQ 279 (402)
T ss_pred CCCCHHHhCcCccCCEEEEeccchhhcCc----ccceeeeecCHHHHHHHHHH--------------HHhcccCCChHHH
Confidence 011 11 1 1235567789998654 57789999887765443210 0001111111111
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEeccccc---ccCC---CCHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK---NTAG---IEPEDV 811 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~---~~~g---~~~~~i 811 (946)
. ++..+|. -+..-+++..+...++.+++.+.|+++-.+.+..+++.++ ++++++.+. ...+ .+..++
T Consensus 280 ~----~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (402)
T PRK06107 280 A----AAAAALN-GDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFY--LYVNCAGLIGKTTPEGKVLETDQDV 352 (402)
T ss_pred H----HHHHHhc-CChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EeeecccccccccccccCCCCHHHH
Confidence 1 1122221 1333344445555567778888887641222222223222 344543210 0011 145677
Q ss_pred HHHHH-HCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 812 AKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 812 ~~~L~-~~Gi~~~-~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+.|. ++|+.+. ...|...+++|+++.. +.+++++.++.|.+.++++
T Consensus 353 ~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 353 VLYLLDSAGVAVVQGTAYGLSPYFRLSIAT--SLETLEEACARIERAVAAL 401 (402)
T ss_pred HHHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence 76664 6799853 3345446899999984 5888888888888776543
No 377
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.57 E-value=1.3e-12 Score=152.51 Aligned_cols=329 Identities=15% Similarity=0.229 Sum_probs=199.3
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC----cccccCCchHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMV 555 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~----~~~l~~~sGa~ge~a~l~a 555 (946)
..+|+|.+.+..++..+......+.+. -+ ..+...++.+.|+++++.. ...++.++||.++++++..
T Consensus 70 ~~lGH~~p~v~~Ai~~q~~~~~~~~~~-~~--------~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~Alkl 140 (459)
T PRK06931 70 LALGHNHPDVLQSIQDVLTSGLPLHTL-DL--------TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKL 140 (459)
T ss_pred ccCCCCCHHHHHHHHHHHhhhcccccc-cc--------CCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHH
Confidence 357888777776666653211111110 01 1133457888888887532 1335668999999888888
Q ss_pred HHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC------------EEEEEcCCCCC--------CCCHHHH----HH
Q 002263 556 IRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKG--------NINIEEL----RK 610 (946)
Q Consensus 556 ~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------------~vv~v~~~~~g--------~~D~e~L----~~ 610 (946)
+|.|. +|++|| ...++||....+....|- .+..+|..... .-|.+.+ ++
T Consensus 141 Ar~~t------gr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06931 141 AKTYT------GRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN 214 (459)
T ss_pred HHHhc------CCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 88762 355666 578899998887654321 23445442211 1123333 33
Q ss_pred HHHh---cCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--------CCCEE
Q 002263 611 AAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVC 675 (946)
Q Consensus 611 ~i~~---~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~ 675 (946)
.+++ ..+++++|++..- ...|++.+ .++++.++|++||+++++|.+ +.|+.+.|.+ -+|++
T Consensus 215 ~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV----~tGfGRtG~~~a~~~~gv~PDiv 290 (459)
T PRK06931 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEV----QAGFARTGKMFAFEHAGIEPDII 290 (459)
T ss_pred HHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----hhcCCcCchHHHhhhcCCCCCEE
Confidence 3331 2246888888643 34566643 499999999999999999986 5677677643 26998
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
++ .|.++ +| -.+|.++.++.+ +.+.... ..+ .+.|+.+.++++.+.|..+.+++
T Consensus 291 t~--gK~l~----gG-~Pi~av~~~~~~-~~~~~~~--------------~~~----T~~gnpla~aaala~L~~l~~~~ 344 (459)
T PRK06931 291 VM--SKAVG----GG-LPLAVLGIKKEF-DAWQPGG--------------HTG----TFRGNQLAMATGLTTLKILKEEN 344 (459)
T ss_pred Ee--ccccc----CC-cceeeeeeHHHH-hhccCCC--------------CCC----CCCCCHHHHHHHHHHHHHHHhCC
Confidence 87 48773 44 446667777654 3221000 001 13356777888889999887776
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEeccccccc------C---CCCHHHHHHHHHHCCcc
Q 002263 756 LTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNT------A---GIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~------~---g~~~~~i~~~L~~~Gi~ 821 (946)
+.+. .....++|.++|++. +.+. ..|. |... -+.+..-+.. . ..-...+.+.+.++|+.
T Consensus 345 l~~~---~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Glm~---giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 417 (459)
T PRK06931 345 LAQN---AAERGEWLKAQLAELQKRYPCIGNVRGR-GLMI---GIEIVDERQPADAMGSYPADGELAAAIQKACFENGLL 417 (459)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHhCCCeEeEecC-ceEE---EEEEccCcccccccccCCccHHHHHHHHHHHHHCCcE
Confidence 5543 446677888888764 3321 2232 3221 1222100000 0 00134677888899998
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 822 ~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+.... ..++++|+.|+...|++|||.++++|.+++.++-
T Consensus 418 ~~~~~-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 418 LERGG-RNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred EeecC-CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 74321 1147899999999999999999999999987754
No 378
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=2.6e-13 Score=156.95 Aligned_cols=155 Identities=19% Similarity=0.212 Sum_probs=120.7
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|.+. +.++.+|++++.+++.++. . +||+||++...|+.+...+....+..|+++.++|. ++
T Consensus 61 ~~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~-~--~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~ 135 (425)
T PRK06084 61 DVLEQRVAALEGGVG--ALAVASGMAAITYAIQTIA-E--AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAA 135 (425)
T ss_pred HHHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHh-C--CCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHH
Confidence 357789999999754 6788999988887776652 3 78999999999987777776555567899888864 45
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+|+++.|. |+++++ |.
T Consensus 136 le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD-~a~a~~~~~~p~~~gaDivv~S~tK~l~G~---g~ 211 (425)
T PRK06084 136 LEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVD-NTVATPVLCRPFEHGADIVVHSLTKYIGGH---GT 211 (425)
T ss_pred HHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCCEEEECchhccccc---cc
Confidence 666 7788999999988 88999999999999999999999994 45566666667789999999998 877643 22
Q ss_pred CceEEEEEch
Q 002263 256 PHAAFLATSQ 265 (946)
Q Consensus 256 P~~g~l~~~~ 265 (946)
.-+|++..+.
T Consensus 212 ~~gG~v~~~~ 221 (425)
T PRK06084 212 SIGGIVVDSG 221 (425)
T ss_pred ceeEEEEeCC
Confidence 2345555433
No 379
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.56 E-value=1e-13 Score=148.91 Aligned_cols=322 Identities=18% Similarity=0.234 Sum_probs=204.5
Q ss_pred cceeeecCCCccccccccc-CccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVT-WPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 558 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~-~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~ 558 (946)
.+|+|.++++++++.+... |-.|..|+. +.+.++.+.|.+++--+ .+.++.|+|+.+++.+++++|.
T Consensus 63 slGHchP~v~~a~~kQl~~l~H~t~~~~~-----------~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~ 131 (442)
T KOG1404|consen 63 SLGHCHPDVVAAAVKQLKKLYHTTSGYLN-----------PPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARL 131 (442)
T ss_pred EcCCCChHHHHHHHHhhhhhEEeeccccC-----------CcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHH
Confidence 6899999999998887411 111111210 12667888888877544 3458889999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCEEEEEcCC-----------CC-------CC-----CC--HHHHHHHH
Q 002263 559 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVSVGTD-----------AK-------GN-----IN--IEELRKAA 612 (946)
Q Consensus 559 y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~vv~v~~~-----------~~-------g~-----~D--~e~L~~~i 612 (946)
|. ..-+|| ...++||..+.++.+.|+...+-+++ +| |. .| .++++..+
T Consensus 132 Yt------~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i 205 (442)
T KOG1404|consen 132 YT------GNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI 205 (442)
T ss_pred hc------CCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence 84 223455 67889999998877766654433221 11 11 01 24455555
Q ss_pred HhcCCCeEEEEEeCC--Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc-cC-------CCEEEeCC
Q 002263 613 EANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-IG-------ADVCHLNL 679 (946)
Q Consensus 613 ~~~~~~t~~vvvt~P--n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~-~G-------aDi~~~s~ 679 (946)
....+.+.+-++..+ ...|++++ .+++..++|+++|+++|.|.+ +.||.+.|. || +||+++
T Consensus 206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEV----qtGfGRtG~~wgfe~h~v~PDIvTm-- 279 (442)
T KOG1404|consen 206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEV----QTGFGRTGHMWGFESHGVVPDIVTM-- 279 (442)
T ss_pred HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhh----hhccccccccccccccCCCccHHHH--
Confidence 443445545454444 46788873 599999999999999999986 678888874 34 477765
Q ss_pred CcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHH
Q 002263 680 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 759 (946)
Q Consensus 680 hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~ 759 (946)
.|.++ +|-.+|.+.++++++.-+..+.. ...| +.|+...++++.+.|..+-+|.+.+.
T Consensus 280 AKgiG-----nG~Pl~AVvtt~EIa~v~~~~~~----------------~fnT-yggnP~a~avg~aVL~Vikee~LqE~ 337 (442)
T KOG1404|consen 280 AKGIG-----NGFPLGAVVTTPEIADVLNQKSS----------------HFNT-YGGNPVACAVGLAVLKVIKEENLQEN 337 (442)
T ss_pred Hhhcc-----CCCcceeeecCHHHHHHHHhccc----------------cccc-cCCCchhHHHHHHHHHHHHHHhHHHH
Confidence 48773 34667788888776654322110 0111 22345556677888899988877665
Q ss_pred HHHHHHHHHHHHHHHhcc---CCee--eccCCCcee-eeEEEecc-cccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 002263 760 SKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HEFIVDLR-GLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 832 (946)
Q Consensus 760 ~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~-~e~v~~~~-~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~ 832 (946)
+. +...||.++|.+. +++. .+|. |... -|++ +.+ .-+.........+.+.+.+.|+.++..... +++
T Consensus 338 aa---~vG~yl~~~l~~l~d~h~iIGdVRG~-GLm~GvE~V-~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~-G~v 411 (442)
T KOG1404|consen 338 AA---EVGSYLLEKLAALKDKHPIIGDVRGR-GLMLGVELV-SDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIH-GNV 411 (442)
T ss_pred HH---HHHHHHHHHHHHHhhcCCceeecccc-eeEEEEEEe-cccCCCCCcchHHHHHHHHHHHHhCeeeeccccc-ceE
Confidence 44 6688999998764 3432 2221 3222 2333 322 111111123457888999999998643322 468
Q ss_pred EEEEcCCCCCHHHHHHHHHHH
Q 002263 833 LMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 833 lri~~t~~~t~~eid~~~~aL 853 (946)
+||.|+...|++|+|..++..
T Consensus 412 friaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 412 FRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EEecCCeeccHHHHHHHHHHH
Confidence 999999999999996666655
No 380
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.56 E-value=1.1e-12 Score=150.57 Aligned_cols=289 Identities=21% Similarity=0.233 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCHHHHHHcCCEEE---EEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCGMKIV---SVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~~~a~~~G~~vv---~v~ 596 (946)
...++++.+++++|.+.+ +..++|+++.+.++.+++.+...+| .++++|++++ +.|+....+....+-.+. ..+
T Consensus 70 ~~~~l~~~la~~~g~~~~-~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00707 70 PQEELAEKLVEHSGADRV-FFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEP 147 (379)
T ss_pred HHHHHHHHHHhhCCCCEE-EEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCC
Confidence 356788999999998743 6667888888777776665532222 1357777654 556655544322221111 122
Q ss_pred CCCCCC----CCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc---cCHHHHHHHHHHcCCEEEEecccccccc--cccC
Q 002263 597 TDAKGN----INIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQV--GLTS 666 (946)
Q Consensus 597 ~~~~g~----~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~--gl~~ 666 (946)
...+.. .|+++|+++++ +++++|+++.++ +.|++. +++++|.++|+++|+++++|+++. .++ +...
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~ 223 (379)
T TIGR00707 148 LVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFF 223 (379)
T ss_pred CCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhh
Confidence 222211 28999999997 678899887654 456542 248999999999999999999864 121 1000
Q ss_pred C-Cc--cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 667 P-GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 667 p-g~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
+ .. ...|++++ +|+|+ +|.++|++++++++.+.+.... .. ...+. +.....+
T Consensus 224 ~~~~~~~~~d~~t~--sK~~~-----~G~riG~~~~~~~~~~~~~~~~-------------~~-~~~~~----~~~~~~a 278 (379)
T TIGR00707 224 AYEHYGIEPDIITL--AKGLG-----GGVPIGATLAKEEVAEAFTPGD-------------HG-STFGG----NPLACAA 278 (379)
T ss_pred hHHhcCCCCCEEEE--ccccc-----CCcccEEEEEcHHHHhhhcCCC-------------CC-CCCCC----CHHHHHH
Confidence 1 11 23577654 68884 4677999998877765543110 00 01111 2334445
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecc--CCCceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRG--VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~--~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
+.+.|..+..++ ..++...++++++++|++. ....... ..+. -+.+.++ .+..++.++|.++|+
T Consensus 279 a~aaL~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~---~~~~~~~-------~~~~~~~~~l~~~Gv 345 (379)
T TIGR00707 279 ALAVLEVIEKER---LLENVKEKGDYFKERLEELGKNYPNKEVRGKGL---MLGIELE-------APCKDIVKKALEKGL 345 (379)
T ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhhCCCCccccCce---EEEEEec-------CcHHHHHHHHHHCCc
Confidence 566666554333 3344556778888888764 2221110 0121 1344443 135789999999999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
.+.... .+.+|++++...|+++++++++.|+++
T Consensus 346 ~v~~~~---~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 346 LVNCAG---PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred EEeeCC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 875322 378999998889999999999999875
No 381
>PRK04311 selenocysteine synthase; Provisional
Probab=99.56 E-value=4.1e-13 Score=155.71 Aligned_cols=291 Identities=21% Similarity=0.241 Sum_probs=176.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC------CHHHHHHcCCEEEEE
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT------NPATAAMCGMKIVSV 595 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~------~~~~a~~~G~~vv~v 595 (946)
..++++.+++++|.+.+ +.+++|+.+... ++... .++++||+++..|.. .+..+...|++++++
T Consensus 129 ~~~~e~~lA~l~Gae~a-~vv~sgtaAl~l---~l~~l------~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v 198 (464)
T PRK04311 129 DRALAALLCALTGAEDA-LVVNNNAAAVLL---ALNAL------AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEV 198 (464)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHH---HHHHh------CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEE
Confidence 55788999999998764 455667765532 23221 246789998764432 233466789999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCc---cccc-ccCHHHHHHHHHHcCCEEEEeccccc-----ccc--c-
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGVY-EEGIDEICKIIHDNGGQVYMDGANMN-----AQV--G- 663 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~---~G~~-~~~i~~I~~ia~~~g~ll~vD~a~~~-----a~~--g- 663 (946)
+.+ +..++++++++|+ ++|++|++++++. .|.. ..|+++|+++||+||+++++|++... .++ .
T Consensus 199 ~~~--~~t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~ 273 (464)
T PRK04311 199 GTT--NRTHLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDE 273 (464)
T ss_pred CCC--CCCCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCC
Confidence 763 4568999999997 7899999998853 3532 23799999999999999999974210 010 0
Q ss_pred --ccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 664 --LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 664 --l~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
+..|.++|+|++++|+||+| |||..|++++++++.+++..+.+.... + ..+. .+.+
T Consensus 274 p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~r~l----r-~dk~-----------~l~~ 331 (464)
T PRK04311 274 PTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLKRAL----R-VDKL-----------TLAA 331 (464)
T ss_pred CchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhHHHH----h-cchH-----------HHHH
Confidence 11234589999999999998 578889999998877665432211100 0 0000 0001
Q ss_pred HHH--HHHHH----HHcHhh---HHHHHHHHHHHHHHHHHHHhccC------Ceeec----c---CCCceeeeEEEeccc
Q 002263 742 PIS--YTYIA----MMGSKG---LTEASKIAILNANYMAKRLEKHY------PILFR----G---VNGTVAHEFIVDLRG 799 (946)
Q Consensus 742 ~~a--~a~l~----~lG~eG---l~~~~~~~~~~a~~l~~~L~~~~------~v~~~----~---~~~~~~~e~v~~~~~ 799 (946)
..+ -.|+. ..+-.+ +....++...+|+.+++.|+++. .+... | ..+.....+.+.+.+
T Consensus 332 l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~ 411 (464)
T PRK04311 332 LEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTP 411 (464)
T ss_pred HHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeC
Confidence 111 11111 111112 11223455568888888887642 22211 1 001112334444432
Q ss_pred ccccCCCCHHHHHHHHHHCC--cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 800 LKNTAGIEPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 800 ~~~~~g~~~~~i~~~L~~~G--i~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.+.+..++.++|.+.. |++. .. .+.+.+-+- +..++|++.+++.|.+++.
T Consensus 412 ----~~~~~~~l~~~lr~~~~~i~~r-~~---~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 412 ----KDRSLEALAARLRLLPPPVIGR-IE---DGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred ----CCCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 2467899999998632 3332 11 466666653 3467899999999988753
No 382
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.56 E-value=3.3e-13 Score=154.60 Aligned_cols=287 Identities=15% Similarity=0.146 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|+++|.+. +..+.+||+++..++.++... +||+||++...|+++...+. ..|++++.+|++
T Consensus 35 ~~~le~~la~~~g~~~--~v~~~sgt~al~lal~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQH--AIAVSSATAGMHITLMALGIG--PGDEVITPSLTWVSTLNMIV----LLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCCC--CCCEEEECCCcHHHHHHHHH----HcCCEEEEEecCCCc
Confidence 4567899999999874 677899998888777666433 89999999999999987764 368888887652
Q ss_pred ------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCC---CCCCccceEEEecc-cc
Q 002263 178 ------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGSA-QR 246 (946)
Q Consensus 178 ------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~---~~~~~GaDi~v~s~-k~ 246 (946)
++++ ++++|++|+..++ +|...|+++|.++|+++|+++++|+ ..+++... ..+.+|+|+..++. |.
T Consensus 107 ~~~d~~~l~~~i~~~tkav~~~~~--~G~~~d~~~i~~~a~~~gi~vi~D~-a~a~g~~~~~~~~g~~g~~~~Sf~~~K~ 183 (379)
T PRK11658 107 LMVTPEAIEAAITPRTKAIIPVHY--AGAPADLDAIRAIGERYGIPVIEDA-AHAVGTYYKGRHIGARGTAIFSFHAIKN 183 (379)
T ss_pred CCcCHHHHHHhcccCCeEEEEeCC--CCCcCCHHHHHHHHHHcCCeEEEEC-CCccCCeECCeecCCCCCEEEeCCCCCc
Confidence 3555 7788999886664 8999999999999999999999943 33444332 35778888777776 66
Q ss_pred ccccCCCCCCceEEEEEc-hhhhhcCCC-ceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHH
Q 002263 247 FGVPMGYGGPHAAFLATS-QEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 324 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~~-~~~~~~lp~-~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~ 324 (946)
+.+ | .+|++.++ +++.+++.. +..|...+.... .......+..+.+.|+ |. -+..+.||+ .
T Consensus 184 l~~-----g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~G~-n~----~~~~l~AAl--~ 246 (379)
T PRK11658 184 ITC-----A-EGGLVVTDDDELADRLRSLKFHGLGVDAFDR----QTQGRAPQAEVLTPGY-KY----NLADINAAI--A 246 (379)
T ss_pred Ccc-----c-CceEEEECCHHHHHHHHHHHHcCCCcchhhh----hcccCCCcceeecccc-cc----CcCHHHHHH--H
Confidence 632 2 34566664 555554422 122321111000 0000001111112333 11 122444554 2
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CC--CC---cCeEEEecC----C--HHHHHHHHHHcCCeeeee--
Q 002263 325 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--PF---FDTVKVKCA----D--AHAIASAAYKIEMNLRVV-- 390 (946)
Q Consensus 325 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~--~~---~~~~~i~~~----~--~~~v~~~L~~~GI~~~~~-- 390 (946)
+...++++++.++..++++++.+.|++++ +..+ .. .. ...+++.++ + ..++.+.|.++||..+..
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~ 325 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLP-FQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFR 325 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCc
Confidence 22346889999999999999999999886 3332 11 11 123444432 2 678999999999965310
Q ss_pred -----------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 -----------------------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 -----------------------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
....+.+-++..-|++|+++++++++
T Consensus 326 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 374 (379)
T PRK11658 326 AAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ 374 (379)
T ss_pred CcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 02346666676778888888888876
No 383
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.56 E-value=3.2e-13 Score=152.31 Aligned_cols=281 Identities=17% Similarity=0.145 Sum_probs=172.6
Q ss_pred cHHHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc---CCCCCCCHHHHHHcCCEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP---VSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~---~saHg~~~~~a~~~G~~v 592 (946)
|..+...++++.+++++|.+.. .+..++|.+++.+++.++. +++++|+++ ...|.++...+.+.|.++
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--------~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~ 122 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--------PPGRKVVHYLPEKPAHPSIPRSCKLAGAEY 122 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--------CCCCEEEECCCCCCCchhHHHHHHHcCCEE
Confidence 5557788999999999999543 3556677766655444332 256888874 357888778899999986
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccc--cCHHHHHHHHHHcCCEEEEecccccccccc-c--CC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGL-T--SP 667 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~--~p 667 (946)
+.. .|+++++. . +++++|+++..+..|.+- .++++|+++|+++|+++++|.|+.....+. . ..
T Consensus 123 ~~~-------~~l~~l~~-~----~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~ 190 (346)
T TIGR03576 123 FES-------DELSELKK-I----DGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPA 190 (346)
T ss_pred ecc-------CCHHHHhh-C----cCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCH
Confidence 432 24555432 1 467788888767778771 279999999999999999999975432121 1 11
Q ss_pred CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHH
Q 002263 668 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 668 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
..+|.|+++.+++|++ +|+.+|++++++++.+.+.... +.. .++. +.....++.+.
T Consensus 191 ~~~~~divv~s~SKal------aG~r~G~v~~~~~li~~l~~~~-----------~~~---~~s~----~~~~~~aa~~a 246 (346)
T TIGR03576 191 LDLGADLVVTSTDKLM------DGPRGGLLAGRKELVDKIKSVG-----------EQF---GLEA----QAPLLAAVVRA 246 (346)
T ss_pred HHcCCcEEEeccchhc------cccceEEEEeCHHHHHHHHHhh-----------cCc---ccCc----cHHHHHHHHHH
Confidence 2357899999999965 4678899999987766543110 000 1111 12222333444
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCH-HHHHHHHHHCCcccCC-C
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEP-EDVAKRLMDYGFHGPT-M 825 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~-~~i~~~L~~~Gi~~~~-~ 825 (946)
|..+.. ....+....+.+++.+.+++ +.+ ++.+.+ + +.++++ +.+. +.+.+.|.++|+.+.. .
T Consensus 247 L~~~~~---~~~~~~l~~r~~~~~~~l~~-~~~-~~~~~~--f--~~~~~~------~~~~~~~~~~ll~~~gV~v~~~~ 311 (346)
T TIGR03576 247 LEEFEL---SRIRDAFKRKEEVYLRLFDK-LNV-ERTPTG--F--VIKGVE------EEKLIEIGLDLLRNYGIITITAV 311 (346)
T ss_pred HhhccH---HHHHHHHHHHHHHHHHHHHh-CCC-CcCCCe--E--EEEeCC------CCCHHHHHHHHHHhCCEEEeCCc
Confidence 443322 23333444556666666664 333 221112 1 344553 1223 4455556678998643 3
Q ss_pred CCC-CCCEEEEEcCCCC-CHHHHHHHHHHHHHH
Q 002263 826 SWP-VPGTLMIEPTESE-SKEELDRYCDALISI 856 (946)
Q Consensus 826 ~~p-~~~~lri~~t~~~-t~~eid~~~~aL~~i 856 (946)
.|+ .++++||++.... ++.|+++|+++|++.
T Consensus 312 ~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 312 GMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred ccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 444 3689999986432 233799999999764
No 384
>PRK06148 hypothetical protein; Provisional
Probab=99.56 E-value=5.2e-13 Score=169.20 Aligned_cols=297 Identities=18% Similarity=0.210 Sum_probs=188.8
Q ss_pred HHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC---------
Q 002263 522 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~--------- 590 (946)
..++.+.|++++..+ ...++.++||.++++++..+|.| . +|.+|| ...++||....+....|.
T Consensus 665 ~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~---t---Gr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~ 738 (1013)
T PRK06148 665 IVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAH---T---GQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKG 738 (1013)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHh---c---CCCeEEEEcCCccCCCcchhhcCchhhcccCCCC
Confidence 456778888887532 22467899999998888888876 2 344555 567899987665443221
Q ss_pred ---EEEEEcCCCC-----CCCC-------HHHHHHHHH---hcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcC
Q 002263 591 ---KIVSVGTDAK-----GNIN-------IEELRKAAE---ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 648 (946)
Q Consensus 591 ---~vv~v~~~~~-----g~~D-------~e~L~~~i~---~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g 648 (946)
.+..++.... +..| .+++++.++ .+++++++|++..- +..|++.+ .++++.++|+++|
T Consensus 739 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g 818 (1013)
T PRK06148 739 RPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAG 818 (1013)
T ss_pred CCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 1222221100 0011 245666664 23467888888753 44566652 4999999999999
Q ss_pred CEEEEecccccccccccCCCc-c------C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC
Q 002263 649 GQVYMDGANMNAQVGLTSPGY-I------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 719 (946)
Q Consensus 649 ~ll~vD~a~~~a~~gl~~pg~-~------G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~ 719 (946)
+++|+|.+ +.|+.+.|. + | +||+++ .|.++ +| -.+|.+++++++++.+....
T Consensus 819 ~llI~DEV----qtGfGRtG~~~~a~e~~gv~PDivt~--gK~lg----gG-~Plgav~~~~ei~~~~~~g~-------- 879 (1013)
T PRK06148 819 GVCIADEV----QVGFGRVGSHWWAFETQGVVPDIVTM--GKPIG----NG-HPMGAVVTTREIADSFDNGM-------- 879 (1013)
T ss_pred CEEEEEec----ccCCCCCCCcchhhhhcCCCcceeee--ccccc----CC-cceEEEEEcHHHHhhccCCC--------
Confidence 99999986 566766663 2 3 699887 48773 44 45788888887766542110
Q ss_pred CCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEE
Q 002263 720 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 794 (946)
Q Consensus 720 ~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v 794 (946)
...+ .+.|+.+.++++.+.|..+-++++.+. .....++|+++|+++ +.+. ..|. |... -
T Consensus 880 --------~~~~-Tf~gnpla~aaa~a~L~~i~~e~l~~~---~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Gl~~---g 943 (1013)
T PRK06148 880 --------EYFN-TFGGNPVSCAIGLAVLDIIEDEDLQRN---ALEIGNYLLAGLRELQDRFDIIGDVRGM-GLFL---G 943 (1013)
T ss_pred --------cccc-CCCCCHHHHHHHHHHHHHHhhccHHHH---HHHHHHHHHHHHHHHHHhCCCceEEeee-ceEE---E
Confidence 0011 244677778888899999987766544 446778888888764 3322 2231 3221 1
Q ss_pred Eecccc---cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 795 VDLRGL---KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 795 ~~~~~~---~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+.+..- +.........+.++|.++|+.+.... |..+.|||.|+..+|++|||+++++|.+++.++
T Consensus 944 vel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 944 IELVTDRKTKAPATAIARYVKNGARERGILIGTEG-PHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEecCCccccCccHHHHHHHHHHHHhCCeEEeccC-CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 222100 00000113568888999999975433 225889999999999999999999999998764
No 385
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.56 E-value=4.7e-13 Score=154.92 Aligned_cols=326 Identities=14% Similarity=0.134 Sum_probs=190.2
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC-cccccCCchHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
.+|++.+++..++..+......+...| +...++.+.|+++++.. ...++.++|+.++++++..+|.|
T Consensus 66 ~lGh~~p~v~~ai~~q~~~~~~~~~~~------------~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~ 133 (433)
T PRK00615 66 IHGHSHPKICDAIQQGAERGTSYGLTS------------EQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGI 133 (433)
T ss_pred ccCCCCHHHHHHHHHHHHhCCCCCCCC------------HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh
Confidence 568887777666665532111110011 22457788888888653 23466789999888888888776
Q ss_pred HHhcCCCCCCEEE-EcCCCCCCCHH---HHHHcCCE---EEEE---c-CCCC----CCCCHHHHHHHHHhcCCCeEEEEE
Q 002263 560 HKARGDHHRNVCI-IPVSAHGTNPA---TAAMCGMK---IVSV---G-TDAK----GNINIEELRKAAEANRDNLSTLMV 624 (946)
Q Consensus 560 ~~~~G~~~~~~Il-i~~saHg~~~~---~a~~~G~~---vv~v---~-~~~~----g~~D~e~L~~~i~~~~~~t~~vvv 624 (946)
. +|.+|+ ...++||.... +....+-. .... + ...+ ...|++++++.++++.+++++|++
T Consensus 134 t------gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~ 207 (433)
T PRK00615 134 T------GRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIF 207 (433)
T ss_pred h------CCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEE
Confidence 2 355666 56789996522 22211100 0000 0 0000 123789999999876677888777
Q ss_pred eCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc------c--CCCEEEeCCCcccccCCCCCCC
Q 002263 625 TYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGP 692 (946)
Q Consensus 625 t~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~------~--GaDi~~~s~hK~f~~P~g~GGP 692 (946)
... +..|.+.+ .+++|.++|++||+++|+|.++ .|+ +.|. + -+|++++ .|.++ +|.|
T Consensus 208 Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~----tG~-R~G~~ga~~~~gv~PDi~~~--gK~lg----gG~p 276 (433)
T PRK00615 208 EPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV----TGF-RVAQGGAAAIYHVKPDITVY--GKILG----GGLP 276 (433)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc----ccc-cccHhHHHHhcCCCCCeEEE--ccccc----CCcc
Confidence 653 44577652 2679999999999999999975 244 3332 2 3688876 48773 3334
Q ss_pred cceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHH
Q 002263 693 GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAK 772 (946)
Q Consensus 693 g~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~ 772 (946)
+|.+++++++++.+... + . ....+.+.|+.+.++++.+.|..+.++.+. ++...+.++|.+
T Consensus 277 -~~av~~~~~i~~~~~~~--~---------~----~~~~~T~~g~p~~~aa~la~L~~i~~~~~~---~~~~~~g~~l~~ 337 (433)
T PRK00615 277 -AAAVVAHKSIMDHLAPE--G---------T----IFQAGTLSGNPLAMAAGKASINLCREQGFY---TQLSTLEQNFLS 337 (433)
T ss_pred -eeeeeecHHHHhhhcCC--C---------C----cccCCCCcccHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHH
Confidence 67788888777655211 0 0 000111234566777888888888766543 334456777877
Q ss_pred HHhcc-----CCeeeccCCCceeeeEEEeccc---ccc---cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCC
Q 002263 773 RLEKH-----YPILFRGVNGTVAHEFIVDLRG---LKN---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESE 841 (946)
Q Consensus 773 ~L~~~-----~~v~~~~~~~~~~~e~v~~~~~---~~~---~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~ 841 (946)
+|++. +.+...+ .+..+ .+.+...+ +.. ........+.+.|.++|+.+....+| .. .++..+
T Consensus 338 ~l~~~~~~~g~~v~~~r-~G~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~--~ls~~h 410 (433)
T PRK00615 338 PIEEMIRSQGFPVSLVR-YGSMF-SFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFE---AS--FLSSAH 410 (433)
T ss_pred HHHHHHHHcCCCeEEEe-eceEE-EEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccc---cc--ceecCC
Confidence 77653 3332222 23221 12222111 000 00001246888899999987544333 11 234557
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 002263 842 SKEELDRYCDALISIREEIA 861 (946)
Q Consensus 842 t~~eid~~~~aL~~i~~e~~ 861 (946)
|++|||++++++.++++.+-
T Consensus 411 t~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 411 SMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999988754
No 386
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=1.1e-13 Score=157.25 Aligned_cols=260 Identities=15% Similarity=0.148 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
...+++.+++|-|.+.+.+ ..+|..+..++++++. +++++||++...|+..... +...|+++..++.
T Consensus 64 ~~~le~~la~LEg~~~a~~-~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 64 HFSLQEAMCELEGGAGCAL-YPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred HHHHHHHHHHHhCCCeEEE-EhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 3467899999998876544 4457666644444331 2568899988777655443 3557999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcC--CEEEEecccccccccccCCCccCCCE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g--~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
.|.++++++++ ++|++|+++.| |.+|.+. ||++|+++||++| ++++||+++.. +.+.+|.++|+|+
T Consensus 135 -----~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~-DI~~Ia~ia~~~g~g~~lvVDnT~a~--p~~~~pl~~GaDi 203 (395)
T PRK08114 135 -----LIGADIAKLIQ---PNTKVVFLESPGSITMEVH-DVPAIVAAVRSVNPDAVIMIDNTWAA--GVLFKALDFGIDI 203 (395)
T ss_pred -----CCHHHHHHhcC---CCceEEEEECCCCCCCEee-cHHHHHHHHHHhCCCCEEEEECCCcc--ccccCHHHcCCcE
Confidence 47899999996 78999999999 5788888 8999999999985 99999988643 3457899999999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
++.|.||+++.+ +.-++|+++.++++...+-. . .+.++...+ + -.| |+...|-+
T Consensus 204 vv~S~tKyl~Gh---sdv~~G~v~~~~~~~~~l~~----~---------~~~~G~~~~-p-------~~a--~l~~rgl~ 257 (395)
T PRK08114 204 SIQAGTKYLVGH---SDAMIGTAVANARCWEQLRE----N---------SYLMGQMVD-A-------DTA--YMTSRGLR 257 (395)
T ss_pred EEEcCcccccCC---CcceeEEEEcCHHHHHHHHH----H---------HHhccCCCC-H-------HHH--HHHHcCCC
Confidence 999999999522 11267777766543221110 0 001111111 1 123 44455555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCe---eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCC
Q 002263 755 GLTEASKIAILNANYMAKRLEKHYPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 831 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~~v---~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~ 831 (946)
-+.-+.++..++|..+++.|+++..| .|++ +. .-...+++++.+ .|+ ++
T Consensus 258 TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPg---------------l~---~~p~~~~~~~~~-~g~---------gg 309 (395)
T PRK08114 258 TLGVRLRQHEESSLKVAEWLAEHPEVARVNHPA---------------LP---GCKGHEFWKRDF-TGS---------SG 309 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCC---------------CC---CCccHHHHHhhC-CCC---------ce
Confidence 56667788889999999999987443 2322 10 112346666643 231 24
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.+-|.+....+++++.+|++.|+-
T Consensus 310 ~~sf~l~~~~~~~~~~~f~~~l~l 333 (395)
T PRK08114 310 LFSFVLKKKLTDEQLANYLDNFSL 333 (395)
T ss_pred EEEEEecCcccHHHHHHHHHhCCc
Confidence 444444211147888999988864
No 387
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.55 E-value=4e-13 Score=153.12 Aligned_cols=303 Identities=18% Similarity=0.153 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC-C
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~-~ 599 (946)
...++++.+++.+|...+ +.+++|+.|.+.++.+ .|.+++++|++|.....+...++...|++++.++++ +
T Consensus 26 ~~~~fE~~~a~~~g~~~~-~~~~sgt~Al~~al~~-------l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYA-VAVSSGTSALHLALRA-------LGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSEE-EEESSHHHHHHHHHHH-------TTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCChhHHHHHHHHh-------cCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCC
Confidence 467899999999998765 4567777666544443 233467999999875555555677899999999998 4
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccCCCEEEeC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLN 678 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~GaDi~~~s 678 (946)
++.+|+++++++|+ ++|++|+++ +.+|... |+++|.++|+++|+.|+-|+||..+..-- ...|.+| |+.++|
T Consensus 98 ~~~id~~~~~~~i~---~~t~ai~~~--h~~G~~~-d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g-d~~~fS 170 (363)
T PF01041_consen 98 TLNIDPEALEKAIT---PKTKAILVV--HLFGNPA-DMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG-DIAIFS 170 (363)
T ss_dssp TSSB-HHHHHHHHH---TTEEEEEEE---GGGB----HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS-SEEEEE
T ss_pred cCCcCHHHHHHHhc---cCccEEEEe--cCCCCcc-cHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC-CceEec
Confidence 69999999999998 899999987 4668887 89999999999999999999975321111 2345666 999999
Q ss_pred CCcccccCCCCCCCcceeEEEec-ccCCCCCC-CccccCCC-CCCCCCCC-CCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGG-IPAPEKSQ-PLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~-~~v~~~~d-~~~~~~~~-~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+|.+=.++.|. .|++++++ .+.+++.. +..|...+ ........ ...+..- +...++.+...|..
T Consensus 171 f~~~K~i~~ge----GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm----~~~~AAigl~QL~~---- 238 (363)
T PF01041_consen 171 FHPTKIITTGE----GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRM----SELQAAIGLAQLKR---- 238 (363)
T ss_dssp SSTTSSS-SSS-----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-----BHHHHHHHHHHHHT----
T ss_pred CCCCCCCcCCC----CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCccccc----HHHHHHHHHHHHHH----
Confidence 87432223232 37888875 33332210 00111000 00000000 0011111 12222233333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCee-eccCCC---ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC----
Q 002263 755 GLTEASKIAILNANYMAKRLEKHYPIL-FRGVNG---TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS---- 826 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~~v~-~~~~~~---~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~---- 826 (946)
+.+..++..++++++.+.|++...+. ...+.+ ...+.|.+.+++. ...+.+++.++|.++||.+....
T Consensus 239 -L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~---~~~~rd~l~~~L~~~GI~~~~~~~~pl 314 (363)
T PF01041_consen 239 -LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDE---ALADRDELVEALRARGIETRPHYPKPL 314 (363)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCC---GCSTHHHHHHHHHHTTBEEBCSTSSCG
T ss_pred -hhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccc---ccchHHHHHHHHHHCCCcccccccCch
Confidence 44555556678889999998863321 111111 2445566655421 11367899999999999754322
Q ss_pred ----------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 827 ----------------WPV-----PGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 827 ----------------~p~-----~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
+|. ...|.+-.....+++|+++++++|+
T Consensus 315 ~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 315 HRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred hhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 110 1346666667789999999999875
No 388
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.55 E-value=6.6e-13 Score=152.90 Aligned_cols=301 Identities=11% Similarity=0.083 Sum_probs=183.9
Q ss_pred cccHHHHHHHHHHHHHHhhCC--Ccc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~--~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+..|. +.. .+..++|++. +..++++.+. .++++|+++...+..+...++..|++
T Consensus 67 ~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 139 (388)
T PRK07366 67 FHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE--GTAHLPLAVL-----NPGDFALLLDPGYPSHAGGVYLAGGQ 139 (388)
T ss_pred CCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 367766666667777666564 344 4665566542 2223333332 25688999999888888889999999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccc
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT 665 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~ 665 (946)
++.+|++++ ...|++++++++. ++++++++++| |.+|.+- +.+++|.++|+++|+++++|.++..-. .+-.
T Consensus 140 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (388)
T PRK07366 140 IYPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV 216 (388)
T ss_pred EEEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence 999999754 3578899988775 57889999999 5789885 257888999999999999999864211 1111
Q ss_pred -CCC--cc--CCC--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 666 -SPG--YI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 666 -~pg--~~--GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
.+. .+ ..+ +++.|+.|+|+.| |.++|++..++++...+-.. +...++++. .
T Consensus 217 ~~~~~~~~~~~~~~vi~~~SfSK~~g~~----GlRiG~~v~~~~li~~l~~~--------------~~~~~~~~~----~ 274 (388)
T PRK07366 217 EPPSILQADPEKSVSIEFFTLSKSYNMG----GFRIGFAIGNAQLIQALRQV--------------KAVVDFNQY----R 274 (388)
T ss_pred CCCChhhCCCCcccEEEEeecccccCCc----chhheehcCCHHHHHHHHHH--------------HhhcccCCC----H
Confidence 111 11 112 4567888988654 78899999887766543210 001111110 1
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-H
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 817 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~ 817 (946)
.+...+.+.+. ..++-+++..+....+.+++.+.|++. .+.+..+.+..+ +.++++.. .+.+..+++++|. +
T Consensus 275 ~~~~~a~~~l~-~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f--~~~~~~~~---~~~~~~~~~~~l~~~ 347 (388)
T PRK07366 275 GILNGAIAALT-GPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMY--VWAKLPEP---WQGNSVEFCTQLVAQ 347 (388)
T ss_pred HHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEE--EEEECCcc---cCCCHHHHHHHHHHh
Confidence 11111222221 123345555566667778888888775 222211222222 44565420 0124678888774 6
Q ss_pred CCcccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 818 YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 818 ~Gi~~~-~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+|+.+. ...|. ..+++||++.. +.+++++.++.|++.
T Consensus 348 ~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 348 TGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CCEEEeCchHhCcCCCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 799753 33343 24789999863 578888887777653
No 389
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.55 E-value=8.5e-13 Score=134.88 Aligned_cols=303 Identities=17% Similarity=0.208 Sum_probs=189.5
Q ss_pred HHHHHHHHHHhhCCCcccccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC--
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-- 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~-- 598 (946)
|..+.+.+++.+|||.+.+. .|+ .+-++.+.++. .++|-|++...+|.+...+|+.+|++|..||-.
T Consensus 63 I~~F~~dlaeFlg~D~~R~t--~GARe~KfavMhal~--------~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~ 132 (382)
T COG1103 63 IKDFLEDLAEFLGMDEVRVT--AGAREAKFAVMHALC--------KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGY 132 (382)
T ss_pred HHHHHHHHHHHhCCceeeec--ccchhhHHHHHHHhc--------cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCC
Confidence 66777889999999986543 343 35566555442 256889999999999999999999999999964
Q ss_pred CCCCCCHHHHHHHHHhcC----CCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCC
Q 002263 599 AKGNINIEELRKAAEANR----DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~----~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
++..+++|...+.|++.. +.+++.++|+|. .+|.+. |.++++++|+++|+++++.+|+..+-.. .+-.+.|+|
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~-Dakkva~ic~e~gvPlllN~AYt~Grmp-vs~ke~g~D 210 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLA-DAKKVAKICREYGVPLLLNCAYTVGRMP-VSGKEIGAD 210 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCch-hhHHHHHHHHHcCCceEeecceeecccc-ccccccCCC
Confidence 357899999999887632 457888999995 689987 8999999999999999999986533222 123467999
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCC-cccCccchhhHHHHH-HHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT-IAAAPWGSALILPIS-YTYIAMM 751 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~-i~~~~~g~~~~~~~a-~a~l~~l 751 (946)
++++|.||+++.. | .+|+++.++++.+..--+. |. .+ ..+...- -||+ .|...+..+| .-+.
T Consensus 211 FiVgSGHKsmAAs----~-PiGvl~~~eE~ae~V~r~S-g~--~~----~~KEvellGCT~-rGapivTlmASfP~V--- 274 (382)
T COG1103 211 FIVGSGHKSMAAS----A-PIGVLAMSEEWAEIVLRRS-GR--AF----PKKEVELLGCTV-RGAPIVTLMASFPHV--- 274 (382)
T ss_pred EEEecCccchhcc----C-CeeEEeehhHHHHHHHhhc-cc--cc----ccceeeeecccc-cCchHHHHHhcCHHH---
Confidence 9999999998642 3 3778998887665321110 00 00 0011111 1442 2322221111 1111
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEE-Eecccc---cccCCCCHHHHHHHHHHCCcccCCCCC
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFI-VDLRGL---KNTAGIEPEDVAKRLMDYGFHGPTMSW 827 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v-~~~~~~---~~~~g~~~~~i~~~L~~~Gi~~~~~~~ 827 (946)
.+- .+..+..+++++|+.+.|+++-.+..-|. .|..|.++ |..+.| .++......=+.+.|.++||+.- .
T Consensus 275 -~eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~-rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI--~- 348 (382)
T COG1103 275 -VER-VKRWDEEVEKARWFVAELEKIGGVKQLGE-RPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI--Q- 348 (382)
T ss_pred -HHH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCC-CCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcccc--c-
Confidence 111 22345667899999999998622211131 23334332 232221 00001112234556666776631 1
Q ss_pred C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 828 P-VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 828 p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
| ....+.+++ +..+.|+++..++++++|+++
T Consensus 349 ~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 349 PGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred cCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 1 123455553 456899999999999999875
No 390
>PRK06149 hypothetical protein; Provisional
Probab=99.55 E-value=8.9e-13 Score=167.12 Aligned_cols=298 Identities=19% Similarity=0.283 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHhh--CCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------
Q 002263 521 MFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 521 ~~~el~~~la~l~--G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~------- 590 (946)
...++.+.|++++ +++. .++.++|++++++++..+|.|. +|.+|| +..++||....+..+.+.
T Consensus 625 ~~~elae~L~~~~p~~~~~-v~f~~SGsEA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~ 697 (972)
T PRK06149 625 AVAEFSERLAALAPDGLDT-VFLVNSGSEANDLAIRLAWAAS------GRRDVVSVLEAYHGWTVATDAVSTSIADNPQA 697 (972)
T ss_pred HHHHHHHHHHHhCCCCcCE-EEEeCCchHHHHHHHHHHHHhc------CCCeEEEEeCCCCCcChhHhhhcCCccccccc
Confidence 4567888899988 3444 3668899999988888888762 234454 667899977654322111
Q ss_pred ------EEEEEcCCCC--C---CCC-----HHHHHHHHHh---cCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHc
Q 002263 591 ------KIVSVGTDAK--G---NIN-----IEELRKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDN 647 (946)
Q Consensus 591 ------~vv~v~~~~~--g---~~D-----~e~L~~~i~~---~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~ 647 (946)
-+..++.... + ..| .+++++.++. +++++++|++..- +..|.+.+ .+++|.++|++|
T Consensus 698 ~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 698 LETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred cCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 1233332211 1 112 3555555532 3467888877643 45577652 399999999999
Q ss_pred CCEEEEecccccccccccCCCc-------cC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCC
Q 002263 648 GGQVYMDGANMNAQVGLTSPGY-------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 718 (946)
Q Consensus 648 g~ll~vD~a~~~a~~gl~~pg~-------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~ 718 (946)
|+++|+|.+ +.|+.+.|. +| +||+++ .|.++ + |-.+|.+++++++++.+....
T Consensus 778 g~llI~DEV----~tGfGRtG~~~~a~e~~gv~PDivt~--gK~lg----~-G~Pl~av~~~~~i~~~~~~~~------- 839 (972)
T PRK06149 778 GGVCIADEV----QVGYGRLGHYFWGFEQQGVVPDIITM--AKGMG----N-GHPLGAVITRREIAEALEAEG------- 839 (972)
T ss_pred CCEEEEEee----hhcCCccCccchhhhhcCCCCCEEEe--ccccc----C-CeeeEEEEEcHHHHhhhccCC-------
Confidence 999999986 456666664 23 699876 47763 3 344788888888776553110
Q ss_pred CCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCcee-ee
Q 002263 719 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HE 792 (946)
Q Consensus 719 ~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~-~e 792 (946)
.. .+| +.|+...++++.+.|..+-++++.+.+ ....+||+++|++. +.+. +.|. |.+. -+
T Consensus 840 -------~~--~sT-~~gnP~~~aaala~L~~i~~e~l~~~~---~~~G~~l~~~L~~l~~~~~~i~~vrG~-Gl~~gve 905 (972)
T PRK06149 840 -------YF--FSS-TGGSPVSCRIGMAVLDVLREEKLQENA---RRVGDHLKARLEALADRHPLIGAVHGM-GLYLGVE 905 (972)
T ss_pred -------cc--cCC-CCCCHHHHHHHHHHHHHHHhcCHHHHH---HHHHHHHHHHHHHHHHhCCCeEEEeec-ceEEEEE
Confidence 00 011 235677788888999988877665543 45678888888764 3322 2332 3221 12
Q ss_pred EEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 793 FIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 793 ~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
++-+..+ +.........+.++|.++|+.+.... +..+.|+|.|...+|++|+|.++++|.+++.+
T Consensus 906 l~~~~~~-~~~~~~~~~~i~~~l~~~Gvl~~~~g-~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 906 LVRDRQT-LEPATEETAAICDRLLELGVIMQPTG-DHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EecCccc-CCCChHHHHHHHHHHHhCCeEEeecC-CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 2211110 00000124578899999999875432 12478999999999999999999999998764
No 391
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.55 E-value=1.3e-13 Score=158.23 Aligned_cols=285 Identities=14% Similarity=0.081 Sum_probs=176.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|+.+..++++++ . .++++|+++...|+..... +...|+++..++.
T Consensus 63 ~~~Le~~lA~l~G~~~a-l~~~sG~~Ai~~~l~al---~-----~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 63 VKLFEERMAVLEGGEEA-LAFGSGMAAISATLIGF---L-----KAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred hHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 34788999999998653 55667776554333332 1 2568899988877655443 2345777776654
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+.+..|...|+|+++
T Consensus 134 -----~d~~~l~~~i~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~g~~vivD~a~a--~~~~~~pl~~g~Div~ 202 (386)
T PRK06767 134 -----ETEADIENKIR---PNTKLIFVETPINPTMKLI-DLKQVIRVAKRNGLLVIVDNTFC--SPYLQRPLELGCDAVV 202 (386)
T ss_pred -----CCHHHHHHhhC---cCceEEEEeCCCCCCceec-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhcCCcEEE
Confidence 38999999996 789999999994 689888 79999999999999999999863 2234456678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.+++|+|+.+ |.+-+|++++++++...+-... + ...+... +. ..+|..+..+ +-+
T Consensus 203 ~S~sK~l~g~---g~~~gG~v~~~~~~i~~~~~~~-----------~-~~~g~~~-----~~---~~a~l~~~~L--~tl 257 (386)
T PRK06767 203 HSATKYIGGH---GDVVAGVTICKTRALAEKIRPM-----------R-KDIGGIM-----AP---FDAWLLLRGL--KTL 257 (386)
T ss_pred ecCcceecCC---CCceeEEEEeChHHHHHHHHHH-----------H-HHhCCCC-----CH---HHHHHHHcCC--CcH
Confidence 9999998521 2222688888876443221000 0 0001100 11 1234433333 334
Q ss_pred HHHHHHHHHHHHHHHHHHhccC--C-eeeccCC------CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC----
Q 002263 757 TEASKIAILNANYMAKRLEKHY--P-ILFRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP---- 823 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~--~-v~~~~~~------~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~---- 823 (946)
..+.++..+++.++++.|+++. . +.|+..+ ......+.|+++. ...++.++.++|...++.++
T Consensus 258 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~----~~~~~~~f~~~l~~~~~~~s~G~~ 333 (386)
T PRK06767 258 AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG----GKEETQAFINDLHFITIAVSLGDT 333 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC----CHHHHHHHHHhCCccEEecCCCCc
Confidence 4555667889999999999862 2 2332100 0011124444431 11245678888876554321
Q ss_pred -C-CCCC------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 824 -T-MSWP------------------VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 824 -~-~~~p------------------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+ +..| .++-+|+++.. |+.|.+++.|.++++.
T Consensus 334 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 334 ETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred CccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1 1111 02578999864 4677777777777653
No 392
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=8.6e-13 Score=150.81 Aligned_cols=289 Identities=15% Similarity=0.155 Sum_probs=181.8
Q ss_pred cHHHHHHHHHHHHHHhhCC--CcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEE
Q 002263 517 GYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 594 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~ 594 (946)
|..++...+.+++.+..|. +...+..++|++. +..++++.+. .+++.|+++...+..+...+...|.+++.
T Consensus 66 g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~--~l~~~~~~~~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~ 138 (368)
T PRK03317 66 DAVALRADLAAYLTAQTGVGLTVENVWAANGSNE--ILQQLLQAFG-----GPGRTALGFVPSYSMHPIIARGTHTEWVE 138 (368)
T ss_pred chHHHHHHHHHHhhhhccCCCChhhEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHhcCCeeEE
Confidence 5545555555666555564 4445666667653 2333444432 25688999888777677778899999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccc-cccccCCCc---
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNA-QVGLTSPGY--- 669 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl~~pg~--- 669 (946)
++.++++.+|++++++++++ .++++|++++| |.+|.+. +.+++.++++.+++++++|.++..- ..+......
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~ 215 (368)
T PRK03317 139 GPRAADFTLDVDAAVAAIAE--HRPDVVFLTSPNNPTGTAL-PLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLP 215 (368)
T ss_pred cccCCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHH
Confidence 98776778999999999973 35677888999 4699998 7999999999889999999986421 011111101
Q ss_pred cCCCE-EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 670 IGADV-CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 670 ~GaDi-~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
...++ ++.++.|+|+. .|-++|++.+++++...+... + . ..+.+ .....++.+.+
T Consensus 216 ~~~~~i~~~SfSK~~g~----~GlRiG~~~~~~~~~~~l~~~------------~--~--~~~~s----~~~~~a~~~~l 271 (368)
T PRK03317 216 EYPRLVVSRTMSKAFAF----AGGRLGYLAAAPAVVDALRLV------------R--L--PYHLS----AVTQAAARAAL 271 (368)
T ss_pred hCCCEEEEEechhhhcc----chhhhhhhhCCHHHHHHHHhc------------C--C--CCCCC----HHHHHHHHHHh
Confidence 11244 45577888753 367889999887766544210 0 0 11111 11112222333
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEE-ecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIV-DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 827 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~-~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~ 827 (946)
.. .+.+.+..++...+.+++.+.|++. .+.+..+.+.+ +++ +. .+..++.+.|.++|+.+.....
T Consensus 272 ~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~~~~~--------~~~~~~~~~l~~~Gv~v~~~~~ 337 (368)
T PRK03317 272 RH--ADELLASVAALRAERDRVVAWLREL-GLRVAPSDANF---VLFGRF--------ADRHAVWQGLLDRGVLIRDVGI 337 (368)
T ss_pred hC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcE---EEEecc--------CCHHHHHHHHHHCCEEEEeCCC
Confidence 22 1233344444556677788888764 22222222322 223 32 1467899999999998764432
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 828 PVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 828 p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
++++||+++ +.+++++|+++|+++++
T Consensus 338 --~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 338 --PGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred --CCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 579999975 67899999999998864
No 393
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.55 E-value=6.7e-13 Score=158.20 Aligned_cols=309 Identities=14% Similarity=0.105 Sum_probs=176.6
Q ss_pred cccHHHHHHHHHHHHHHhh--CCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 515 AQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~--G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
.+|..++...+.+++.+.. +++...+..++|++. +..++++.+. .++|+|+++...+..+...+.+.|.++
T Consensus 184 ~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~e--al~~~~~~l~-----~~Gd~Vli~~P~y~~y~~~~~~~g~~~ 256 (517)
T PRK13355 184 SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSE--LINLSMSALL-----DDGDEVLIPSPDYPLWTACVNLAGGTA 256 (517)
T ss_pred CcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHH--HHHHHHHHhC-----CCCCEEEEcCCCCcCHHHHHHHCCCEE
Confidence 4676665555555554432 344445555666542 2333344332 256899999998888888899999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--c
Q 002263 593 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--L 664 (946)
Q Consensus 593 v~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g--l 664 (946)
+.++++++ +.+|+++|+++++ +++++|++++| |.+|.+- +.+++|+++|++||+++++|.++..- ..+ .
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~ 333 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEH 333 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCc
Confidence 99998754 5799999999996 78999999999 4789875 24899999999999999999986311 111 1
Q ss_pred cCCCccCCCE--E-EeCCCcccccCCCCCCCcceeEEEe--cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 665 TSPGYIGADV--C-HLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 665 ~~pg~~GaDi--~-~~s~hK~f~~P~g~GGPg~G~i~~~--~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
.....+..|+ + +.++.|+|++ .|.++|++++. +.+...+-..+ .. ......+.+..++.
T Consensus 334 ~s~~~~~~~~~vi~~~S~SK~~~~----~G~RiG~~i~~~~~~~~~~~~~~l-~~----------~~~~~~~~~~~~q~- 397 (517)
T PRK13355 334 TSIASLAPDLFCVTFSGLSKSHMI----AGYRIGWMILSGNKRIAKDYIEGL-NM----------LANMRLCSNVPAQS- 397 (517)
T ss_pred ccHHHhCCCCeEEEEecchhhccC----cccceEEEEeeCchhhHHHHHHHH-HH----------HhcCcCCcChHHHH-
Confidence 1112222343 2 3567888764 47899999864 22211100000 00 00001111111121
Q ss_pred HHHHHHHHHHHHcHhhHHH---HHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHH-HHH
Q 002263 740 ILPISYTYIAMMGSKGLTE---ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRL 815 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~---~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~-~~L 815 (946)
++...|. +.+.+.+ ..++...+.+++.+.|+++..+.+..+++.++ ++++++.-.. ...+..+++ +.|
T Consensus 398 ---a~~~aL~--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy--~~~~l~~~~~-~~~~~~~~~~~ll 469 (517)
T PRK13355 398 ---IVQTALG--GHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFY--IFPKIDVKKF-NIHDDEQFALDLL 469 (517)
T ss_pred ---HHHHHhc--CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeE--EEeecCcccC-CCCCHHHHHHHHH
Confidence 1111121 1111111 12334556788888887642222222333332 2335431000 011344555 456
Q ss_pred HHCCccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 816 MDYGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 816 ~~~Gi~~-~~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.++|+.+ +...|. .++++||++. .+.++|+..++.|.+.++.
T Consensus 470 ~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 470 HDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 6889975 333342 4689999985 5677788777777776653
No 394
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.55 E-value=5.4e-13 Score=154.32 Aligned_cols=293 Identities=22% Similarity=0.246 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC----C--CHHHHHHcCCEEEE
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIVS 594 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg----~--~~~~a~~~G~~vv~ 594 (946)
...++++.+++++|.+.+ +.+++|+.+...++ ..+ .++++||+++..|. + .+..+...|++++.
T Consensus 123 r~~~le~~lA~l~gae~a-lvv~sg~aAi~l~l---~~l------~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~ 192 (454)
T TIGR00474 123 RYSHVEGLLCELTGAEDA-LVVNNNAAAVLLAL---NTL------AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVE 192 (454)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHH---HHh------CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEE
Confidence 356889999999999865 34567776653333 221 25678999887652 1 23346678999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCc---ccc--cccCHHHHHHHHHHcCCEEEEeccccc--c---ccc-
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGV--YEEGIDEICKIIHDNGGQVYMDGANMN--A---QVG- 663 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~---~G~--~~~~i~~I~~ia~~~g~ll~vD~a~~~--a---~~g- 663 (946)
++.+ +..|+++++++|+ ++|++|++++++. .|. +. |+++|+++||++|+++++|++... . ++.
T Consensus 193 v~~~--~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~-dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~ 266 (454)
T TIGR00474 193 VGTT--NRTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEV-SIAELVALGREHGLPVMEDLGSGSLVDLSRYGLP 266 (454)
T ss_pred eCCC--CCCCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCC-CHHHHHHHHHHcCCeEEEECCCcccccchhccCC
Confidence 9763 3468999999996 8899999988853 353 44 799999999999999999964110 0 000
Q ss_pred ----ccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCccc--Cccch
Q 002263 664 ----LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA--APWGS 737 (946)
Q Consensus 664 ----l~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~--~~~g~ 737 (946)
+..+.++|+|++++|.||+| |||..|++++++++.+.+....+...- + -.|. .+.. ...|.
T Consensus 267 ~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~r~l----r-~~k~--~la~l~~~l~~ 333 (454)
T TIGR00474 267 DEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLTRAL----R-VDKL--TLAALEATLRL 333 (454)
T ss_pred CCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhHHHH----h-hChH--HHHHHHHHHHH
Confidence 12345689999999999998 567889999998776665433211100 0 0000 0000 00000
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc----C--Ceeecc------C-CCceeeeEEEecccccccC
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH----Y--PILFRG------V-NGTVAHEFIVDLRGLKNTA 804 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~----~--~v~~~~------~-~~~~~~e~v~~~~~~~~~~ 804 (946)
...--.+|.. .-|-+-+....++..++|..+++.|++. + ++.... . .+.....+.+.+.+ .
T Consensus 334 ~~~~~~a~~~--~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~----~ 407 (454)
T TIGR00474 334 YLDPEKALEK--IPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTP----D 407 (454)
T ss_pred HhCchhhhhh--chHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEec----C
Confidence 0000001111 1111112222345556788888888653 1 221110 0 01122334444432 2
Q ss_pred CCCHHHHHHHHHHCC--cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 805 GIEPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 805 g~~~~~i~~~L~~~G--i~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
+.++.++.++|.+.. |++. +. .+.+.+-+- +..++|++.+++.|
T Consensus 408 ~~~~~~l~~~lr~~~~~ii~r-~~---~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 408 GLSAEKLEARLRELPPPIIGR-IE---DDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred CCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeC-cCCHHHHHHHHHHh
Confidence 567899999998544 3322 11 466666653 23567888888765
No 395
>PRK07683 aminotransferase A; Validated
Probab=99.55 E-value=1.2e-12 Score=150.72 Aligned_cols=300 Identities=15% Similarity=0.151 Sum_probs=181.0
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Ccc-cccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~-~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+..|. +.. .+..++| +++.. ++++.+. .++++|+++...++.+...+...|++
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~---~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 136 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAID---IAFRTIL-----EPGTEVILPAPIYPGYEPIIRLCGAK 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH---HHHHHhC-----CCCCEEEEcCCCccchHHHHHHcCCE
Confidence 56666666666666655565 333 3444444 44432 3333321 24688999988777777778899999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccccc-ccccC
Q 002263 592 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 666 (946)
Q Consensus 592 vv~v~~~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~~ 666 (946)
++.++.+++ ..+|+++++++++ ++++++++.+|+ .+|.+- .++++|+++|+++|+++++|.++.... ..-..
T Consensus 137 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 213 (387)
T PRK07683 137 PVFIDTRSTGFRLTAEALENAIT---EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHT 213 (387)
T ss_pred EEEeecCcccCCCCHHHHHHhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcC
Confidence 999998765 4679999999986 678899999994 789874 258999999999999999999864211 11000
Q ss_pred C-Cc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 667 P-GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 667 p-g~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
+ .. .+-.+++.++.|.|+.| |-++|++.+++++.+.+-.. ......+.+ ....
T Consensus 214 ~~~~~~~~~~~vi~~~s~SK~~~~p----GlRiG~i~~~~~l~~~~~~~--------------~~~~~~~~~----~~~q 271 (387)
T PRK07683 214 SIAHFPEMREKTIVINGLSKSHSMT----GWRIGFLFAPSYLAKHILKV--------------HQYNVTCAS----SISQ 271 (387)
T ss_pred ChhhccCCcCCeEEEeeccccccCc----cceeEEEEcCHHHHHHHHHH--------------HHhccCCCC----hHHH
Confidence 1 11 12246677888988655 67899999887765543210 000111111 1111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHH-HHHCCc
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR-LMDYGF 820 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~-L~~~Gi 820 (946)
.++...+ ..|..-+++..++...+.+++.+.|++. .+.+..+.+.++ +++.++. .+.+..++++. |.++||
T Consensus 272 ~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~ll~~~gI 343 (387)
T PRK07683 272 YAALEAL-TAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFY--LFPSIGH----FTMSSFDFALDLVEEAGL 343 (387)
T ss_pred HHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCE
Confidence 1122222 2233334444455556777888888764 221111223222 3334431 13456778766 467899
Q ss_pred ccC-CCCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 821 HGP-TMSW-P-VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 821 ~~~-~~~~-p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.+. ...| + ..+.+||++.. +++++.+.++.|.++++
T Consensus 344 ~v~pg~~f~~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 344 AVVPGSAFSEYGEGYVRLSYAY--SIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 863 3223 2 25799999974 57777777777776654
No 396
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.55 E-value=1.1e-12 Score=152.03 Aligned_cols=143 Identities=18% Similarity=0.177 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
...+++.++++.|.+.. +..++|+.+..++++++. .++++|+++...|+.... .+...|++++.++.
T Consensus 66 ~~~Le~~lA~leg~~~a-l~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALEGGIGA-LAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 44688999999997644 566778766644443331 256889998877754332 25678999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|.++|+|+++
T Consensus 137 -----~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~-di~~I~~la~~~gi~vIvD~t~a~--~~~~~pl~~gaDivv 205 (431)
T PRK08248 137 -----SDPENFEAAIT---DKTKALFAETIGNPKGDVL-DIEAVAAIAHEHGIPLIVDNTFAS--PYLLRPIEHGADIVV 205 (431)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEeCCCCc--cccCChhHcCCCEEE
Confidence 38999999996 78999999998 6789998 899999999999999999988542 224566789999999
Q ss_pred eCCCcccc
Q 002263 677 LNLHKTFC 684 (946)
Q Consensus 677 ~s~hK~f~ 684 (946)
.|+||+++
T Consensus 206 ~S~tK~lg 213 (431)
T PRK08248 206 HSATKFIG 213 (431)
T ss_pred EcCccccC
Confidence 99999985
No 397
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.55 E-value=1.4e-12 Score=149.05 Aligned_cols=212 Identities=18% Similarity=0.161 Sum_probs=146.6
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---cc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 178 (946)
.++++.+|++.|.+ ++.+++++++++.+++.++ +. +||+|+++...|+++...+..++...++++..++. ++
T Consensus 54 ~~le~~lA~l~g~~--~v~~~~gg~~Ai~~~l~al-l~--~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~ 128 (382)
T TIGR02080 54 DLLQQALAELEGGA--GAVVTNTGMSAIHLVTTAL-LG--PDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA 128 (382)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-cC--CCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 34678999999954 5889999999888877766 33 89999999999998888877666667888888764 44
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+....|-++|+|++++|. |+++++. +
T Consensus 129 l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~---~ 204 (382)
T TIGR02080 129 LRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHS---D 204 (382)
T ss_pred HHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeecceeccCCC---C
Confidence 555 7788999999998 67999999999999999999999994 34444444456678999999998 7664321 1
Q ss_pred CceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
--.|++.++ +++.+++.. .+...| +|. +++ .+ |+...|-+-+...
T Consensus 205 ~~~G~i~~~~~~~~~~l~~-------------------------~~~~~g---~~~-sp~---~a--~l~lr~l~tl~~R 250 (382)
T TIGR02080 205 VIAGAVIAKDPQVAEELAW-------------------------WANNLG---VTG-GAF---DS--YLTLRGLRTLVAR 250 (382)
T ss_pred ceeEEEEeCCHHHHHHHHH-------------------------HHHccC---CCC-CHH---HH--HHHHcccchHHHH
Confidence 125776664 344333200 000101 110 121 11 2233444445555
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
.++..+++..+.+.|++.+.++
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 6677789999999999875354
No 398
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.55 E-value=1.1e-12 Score=152.08 Aligned_cols=143 Identities=17% Similarity=0.198 Sum_probs=112.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+. .+..++|++++.+++.++. +++++||++...|+..... +...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~-al~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALEGGTA-ALAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 3468899999999876 4566788877754444331 2468899987777654332 5668999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++... -...|-++|+|+++
T Consensus 136 ~-----d~~~l~~ai~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~a~a~~--~~~~pl~~gaDivv 204 (427)
T PRK05994 136 D-----DPASFERAIT---PRTKAIFIESIANPGGTVT-DIAAIAEVAHRAGLPLIVDNTLASP--YLIRPIEHGADIVV 204 (427)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCcccc--ccCCccccCCcEEE
Confidence 3 8999999996 78999999998 5789887 7999999999999999999987532 23567778999999
Q ss_pred eCCCcccc
Q 002263 677 LNLHKTFC 684 (946)
Q Consensus 677 ~s~hK~f~ 684 (946)
.|+||+++
T Consensus 205 ~S~tK~lg 212 (427)
T PRK05994 205 HSLTKFLG 212 (427)
T ss_pred EcCccccC
Confidence 99999985
No 399
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.55 E-value=1.2e-12 Score=151.99 Aligned_cols=308 Identities=12% Similarity=0.103 Sum_probs=180.5
Q ss_pred ccHHHHHHHHHHHHHHhhC--------CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHH
Q 002263 516 QGYQEMFNNLGEWLCTITG--------FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM 587 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G--------~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~ 587 (946)
+|..++...+.+++.+.++ ++...+..++|++. +..++++.+. .++++|+++...|..+...+..
T Consensus 75 ~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~ 147 (412)
T PTZ00433 75 VGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSH--AILMALTALC-----DEGDNILVPAPGFPHYETVCKA 147 (412)
T ss_pred CCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHH--HHHHHHHHhc-----CCCCEEEEccCCcccHHHHHHH
Confidence 5665555555555554332 33344445555432 2233333331 2568899999988888888999
Q ss_pred cCCEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-
Q 002263 588 CGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ- 661 (946)
Q Consensus 588 ~G~~vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~- 661 (946)
.|++++.+++++ ++.+|+++|+++++ +++++|++++| |.+|.+- .++++|.++|+++|+++++|.++..-.
T Consensus 148 ~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 224 (412)
T PTZ00433 148 YGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVF 224 (412)
T ss_pred cCCEEEEEecCccccCcCCHHHHHHHhc---cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccccccc
Confidence 999999999864 36799999999886 67899999999 4689764 258999999999999999999864211
Q ss_pred cc--ccCCCcc---CCCEEEeCCCcccccCCCCCCCcceeEEEe-c-----ccCCCCCCCccccCCCCCCCCCCCCCCCc
Q 002263 662 VG--LTSPGYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVK-K-----HLAPFLPSHPVVSTGGIPAPEKSQPLGTI 730 (946)
Q Consensus 662 ~g--l~~pg~~---GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~-----~l~~~lp~~~v~~~~d~~~~~~~~~~~~i 730 (946)
.+ +.....+ ..-|++.++.|+|+.| |-++|++.+. + ++...+.. + . ....++
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRlG~~i~~~p~~~~~~~~~~~~~--~----------~-~~~~~~ 287 (412)
T PTZ00433 225 NGATFTSVADFDTTVPRVILGGTAKNLVVP----GWRLGWLLLVDPHGNGGDFLDGMKR--L----------G-MLVCGP 287 (412)
T ss_pred CCCCccchhhccCCCceEEEccchhhcCCC----CeeEEEEEEeCCcccHHHHHHHHHH--H----------h-hccCCC
Confidence 11 0000111 1125567788888644 7889999872 2 12211100 0 0 000111
Q ss_pred ccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCC-CCHH
Q 002263 731 AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAG-IEPE 809 (946)
Q Consensus 731 ~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g-~~~~ 809 (946)
+ .....++..++..-..+-+++..+....+.+++.+.|++...+.+..+.+..+ +.++++.-.. .+ .+..
T Consensus 288 ~------~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--~~~~l~~~~~-~~~~~~~ 358 (412)
T PTZ00433 288 C------SVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMF--LMSRLDLEKF-RDIKSDV 358 (412)
T ss_pred C------hHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEE--EEEEechhhc-CCCCCHH
Confidence 1 11111112222211122344455556677788888887642222212222222 3344431000 01 2467
Q ss_pred HHHHHHH-HCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 810 DVAKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 810 ~i~~~L~-~~Gi~~~-~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+++++|. ++|+.+. ...|..++++|+++.. ..+++++.++.|.++++..+
T Consensus 359 ~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 359 EFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 8999987 5799753 3334446899999974 47788888888887776544
No 400
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=1.1e-12 Score=150.14 Aligned_cols=282 Identities=16% Similarity=0.187 Sum_probs=175.5
Q ss_pred HHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCC
Q 002263 524 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 603 (946)
Q Consensus 524 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~ 603 (946)
++++.+++.+|.+...+..++|++. +..++++.+. .++++|+++...++.+...++..|++++.++.++++.+
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 147 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSED--LIAVICRAVL-----RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGF 147 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCC
Confidence 5778888999987655666666642 2222333321 25688999887666566668899999999999888889
Q ss_pred CHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHH--cCCEEEEecccccccccccCCC------ccCCC-
Q 002263 604 NIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG------YIGAD- 673 (946)
Q Consensus 604 D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a~~gl~~pg------~~GaD- 673 (946)
|+++++++++ +++++|++++| |.+|.+- +.+++.++++. .++++++|+++..-..+-..+. ..+-.
T Consensus 148 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 148 DLDALCAAVA---RAPRMLMFSNPSNPVGSWL-TADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred CHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 9999999997 57788999999 5799887 56666555543 4789999998632111100111 11112
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
|++.++.|+|++ .|.++|++.+. +.+.+.+-. . +...+++ .....++.+.+. .
T Consensus 224 i~i~SfSK~~~l----~GlRiG~~i~~~~~l~~~~~~-~-------------~~~~~~~------~~~q~~~~~~l~--~ 277 (371)
T PRK05166 224 IVLRTFSKAYGL----AGLRVGYGLVSDPELVGLLDR-V-------------RTPFNVN------GAAQAAALAALD--D 277 (371)
T ss_pred EEEeechHhhhc----chhheeeeecCCHHHHHHHHH-h-------------ccCCCCC------HHHHHHHHHHhc--C
Confidence 556677888754 47899997764 444433210 0 0001111 111111112211 2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCCC
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVP 830 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~~ 830 (946)
.+-+++..+....+.+++.+.|++. +.+ . .+.+.+ ++++++ .+..++.+.|.++||.+.... +...
T Consensus 278 ~~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~-p~~g~f---l~~~~~-------~~~~~l~~~l~~~gi~v~p~~~~~~~ 345 (371)
T PRK05166 278 EEHLAKGVALALAERERLKKELAEMGYRI-A-PSRANF---LFFDAR-------RPASAVAEALLRQGVIVKPWKQPGFE 345 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCee-C-CCcCCE---EEEeCC-------CCHHHHHHHHHHCCeEEecCCCCCCC
Confidence 2334444555556777888888875 332 2 222322 345543 356889999999999864332 2246
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 831 GTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 831 ~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+++||+++ +.++.++|+++|+.+.
T Consensus 346 ~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 346 TFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 88999996 5778999999998764
No 401
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.55 E-value=9.3e-13 Score=153.26 Aligned_cols=330 Identities=17% Similarity=0.199 Sum_probs=199.2
Q ss_pred ccceeeecCCCc--ccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhC---CCcccccCCchHHHHHHHHH
Q 002263 480 IPLGSCTMKLNA--TTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLM 554 (946)
Q Consensus 480 ~~lGs~~~~~~~--~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~ 554 (946)
..+|++.+++.. ++..+.... .+...+... -..+...++.+.|+++++ ++. .++.++|+.++++++.
T Consensus 57 ~~lGh~~p~v~~~~ai~~ql~~l-~~~~~~~~~------~~~~~~~~la~~l~~~~~p~~~~~-v~f~~SGsEAve~AlK 128 (443)
T PRK08297 57 SALGMNHPALADDPEFRAELGRA-ALNKPSNSD------VYTVEMARFVDTFARVLGDPELPH-LFFVDGGALAVENALK 128 (443)
T ss_pred hcCCCCChHHhhHHHHHHHHHHh-hhhccccCC------cCCHHHHHHHHHHHhhcCCCCCCE-EEEeCchHHHHHHHHH
Confidence 367888887776 665553211 010000000 011234567778888772 332 3678999999999999
Q ss_pred HHHHHHH----hcCC--CCCCEEE-EcCCCCCCCHHHHHHcCCEE-----------EEEcCC-------C-C-------C
Q 002263 555 VIRAYHK----ARGD--HHRNVCI-IPVSAHGTNPATAAMCGMKI-----------VSVGTD-------A-K-------G 601 (946)
Q Consensus 555 a~r~y~~----~~G~--~~~~~Il-i~~saHg~~~~~a~~~G~~v-----------v~v~~~-------~-~-------g 601 (946)
.+|.|.. .+|. ++|.+|| ...++||....+....|... ..++.. . + .
T Consensus 129 lAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (443)
T PRK08297 129 VAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALE 208 (443)
T ss_pred HHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHH
Confidence 9988852 2343 2356676 56789999887765544210 011110 0 0 0
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc---cCHHHHHHHHHHcCCEEEEecccccccccccCCCcc-------
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------- 670 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------- 670 (946)
.-|++++++.++++.+++++|+++.- +..|++. ..+++|.++|++||+++++|.+ +.|+.+.|.+
T Consensus 209 ~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~g 284 (443)
T PRK08297 209 AEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEV----QTGVGLTGTAWAYQQLG 284 (443)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech----hhccCccchHHHHHhcC
Confidence 01456777888777788999988753 4557663 2699999999999999999986 4566666532
Q ss_pred -CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 671 -GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 671 -GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
-+|++++ .|.+ | ..|.+. .+++...+.. .+.. . . ...+.+.|+.+.++++.+.|.
T Consensus 285 v~PDiv~~--gK~l--~------~~a~l~-~~~i~~~~~~-~~~~--------~--~--~~~~T~~gnpl~~aaa~a~L~ 340 (443)
T PRK08297 285 VRPDIVAF--GKKT--Q------VCGIMA-GRRVDEVEDN-VFAV--------S--S--RINSTWGGNLVDMVRARRILE 340 (443)
T ss_pred CCCCEEEe--cccc--c------ccceec-chHHHHhhhh-hccC--------c--c--ccCCCCCccHHHHHHHHHHHH
Confidence 3799987 4875 2 123343 3322111100 0000 0 0 011113356777778888888
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCe---eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKH---YPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v---~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
.+.++++.+. ...+.++|.++|++. +.. ...|. |.. +.+.+.. ......+.++|.++|+.+.
T Consensus 341 ~l~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~---~~i~~~~-----~~~~~~~~~~l~~~Gvl~~ 408 (443)
T PRK08297 341 VIEEDGLVEN---AARQGEYLLARLEELAAEFPAVVSNVRGR-GLM---CAFDLPT-----TADRDEVIRRLWEEGVLVL 408 (443)
T ss_pred HHHhcCHHHH---HHHHHHHHHHHHHHHHHHCCCcceeeecc-ceE---EEEEecC-----HHHHHHHHHHHHHCCEEEe
Confidence 8877765544 446677888888763 332 12231 322 2233321 1234678999999999874
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 824 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 824 ~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
... ...+|++|+..+|++|||+++++|.++++++
T Consensus 409 ~~~---~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 409 PCG---ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred cCC---CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 222 3679999999999999999999999988764
No 402
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.55 E-value=1.4e-12 Score=136.98 Aligned_cols=308 Identities=18% Similarity=0.181 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHhhCCCcccccCCchHHHH-HHHHHHHHHHHHhcCCCCCCEEEEcCCCC-CCCHHH----HHHcCCE
Q 002263 518 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGE-YAGLMVIRAYHKARGDHHRNVCIIPVSAH-GTNPAT----AAMCGMK 591 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge-~a~l~a~r~y~~~~G~~~~~~Ili~~saH-g~~~~~----a~~~G~~ 591 (946)
+..+=..+-.+++-|.|.....+....++..+ +..|.+ .|+.+ .+++||+++..- ++.... +.+.|..
T Consensus 74 W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~a--alr~~----~~r~vIv~E~~~fpTdly~a~g~~~~~~~~ 147 (407)
T COG3844 74 WFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAA--ALRPQ----EGRRVIVSEGDNFPTDLYIAEGLADLLGIG 147 (407)
T ss_pred hhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHH--HhccC----CCceEEeecCCCCCcchhhhcchhhhhccc
Confidence 33334456678999999876443333343334 333322 22212 245677776542 222222 3344432
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCc-ccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCcc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 670 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~ 670 (946)
.+-.+.+.+++++++++ ++++.|++++-|+ +|-.- |+.+|.+++|++|+++..|=||..+...+ .-..+
T Consensus 148 -----~~~~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~-dm~aiT~~AH~~galv~wDLAHsaGavp~-~Lh~~ 217 (407)
T COG3844 148 -----YDLEGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLL-DMRAITALAHQHGALVGWDLAHSAGAVPV-DLHAA 217 (407)
T ss_pred -----ccceeeeChHHHHHhhc---cceEEEEecccccccccee-eHHHHHHHHHhcCceEEeehhcccCCcce-eeccc
Confidence 33346678889999997 9999999999985 89888 89999999999999999998875332221 23567
Q ss_pred CCCEEEeCCCcccccCCCCCCCc-ceeEEEecc-cCCCCCCCccccCC--C-C--CC-CC-CCCCCCCcccCccchhhHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPG-MGPIGVKKH-LAPFLPSHPVVSTG--G-I--PA-PE-KSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg-~G~i~~~~~-l~~~lp~~~v~~~~--d-~--~~-~~-~~~~~~~i~~~~~g~~~~~ 741 (946)
|+|+.+...||.+. |||| .+++++.++ ..+..|. .-|+-+ + + +. +. .+-...-.|+++ +-..+
T Consensus 218 gaDfaigcsyKYLN-----gGPGapa~l~v~~~h~e~~~~~-lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~--~V~s~ 289 (407)
T COG3844 218 GADFAIGCSYKYLN-----GGPGAPAGLFVAPRHRERSWPP-LSGWWGHARPFAMEEVYAPGPGARRFLCGTQ--PVLSL 289 (407)
T ss_pred CCCeeeeeeceecc-----CCCCCceeEEeccccccccccc-cccccCCCCcchhhhccCcCccccceeeCCc--chhhh
Confidence 99999999999984 7885 566777654 4444442 222211 0 0 00 00 000011123221 11112
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCC--CceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~~~~~~--~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
++--..|....+-++.++.++++.+++|+.+-++.. |.+....+. ...-..+.+..+ ...+|.+.|.
T Consensus 290 aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------~~~~V~qaLi 361 (407)
T COG3844 290 AALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--------HGYQVMQALI 361 (407)
T ss_pred HHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--------cHHHHHHHHH
Confidence 222334666777788899999999999999988763 232221211 111112333332 5789999999
Q ss_pred HCCcccCCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEI 860 (946)
Q Consensus 817 ~~Gi~~~~~~~p~~~~lri~~t~-~~t~~eid~~~~aL~~i~~e~ 860 (946)
++|+..- |..++.||+.||. +++..|+=..+++|.+++++.
T Consensus 362 ~rGVigD---~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 362 DRGVIGD---FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HcCcccc---ccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 9999753 3346999999986 578899999999999988764
No 403
>PLN02271 serine hydroxymethyltransferase
Probab=99.54 E-value=3.5e-13 Score=154.93 Aligned_cols=293 Identities=13% Similarity=0.032 Sum_probs=187.5
Q ss_pred HHHHHHHHHhCCCC----cceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHH-----HhhcCCCeEEEE
Q 002263 103 NFQTMIADLTGLPM----SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-----TRADGFDIKVVV 173 (946)
Q Consensus 103 e~q~~la~L~g~~~----~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~-----~~a~~~gi~v~~ 173 (946)
-+++...+|+|++. +|+-.+ +|+.|..++.+|+ +. +||+|+..+..|...+.... ..+...|+.+..
T Consensus 198 la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~AL-l~--PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~ 273 (586)
T PLN02271 198 LCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGL-LL--PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFES 273 (586)
T ss_pred HHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHh-cC--CCCEEEEecCCCCCchhcccccccccccccccceEEE
Confidence 35678889999887 677666 6777888888877 44 89999998888866554321 112234544444
Q ss_pred e-----------ccccccc--cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEE-EecCcccc---CCCCCCCcc
Q 002263 174 S-----------DLKDIDY--KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVM-ATDLLALT---ILKPPGELG 236 (946)
Q Consensus 174 ~-----------~~~~l~~--i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v-~a~~~al~---~l~~~~~~G 236 (946)
+ |++++++ ...++++|++....+. ...|+++|.++|+++|++++| ++|..++- ..+.|.. +
T Consensus 274 vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp-r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~ 351 (586)
T PLN02271 274 LPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP-REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-Y 351 (586)
T ss_pred EEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc-CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-C
Confidence 3 3345555 4678999988765444 667999999999999999999 45543332 1223433 6
Q ss_pred ceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 237 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 237 aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
|||+++++ |+|.+| ..|+++++++....+.+...+++.+.. .+.+.-.+. +.-.-..+.|+.|. .+.
T Consensus 352 aDvvt~TTHKtLrGP------rGG~I~~r~~~~~~~~g~~gs~s~~~~-~~d~~~kI~-~aVfPglqgGphn~----~IA 419 (586)
T PLN02271 352 CDIVTSTTHKSLRGP------RGGIIFYRKGPKLRKQGMLLSHGDDNS-HYDFEEKIN-FAVFPSLQGGPHNN----HIA 419 (586)
T ss_pred CcEEEeCCcccCCCC------CceEEEecccccccccCCccccccccc-cHHHHHHhh-cccCCccccChhHH----HHH
Confidence 99999999 777655 447888888766656565555442210 000100000 00000233444443 354
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcCeEEEecCC----HHHHHHHHHHcCCeeee-
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD----AHAIASAAYKIEMNLRV- 389 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~~----~~~v~~~L~~~GI~~~~- 389 (946)
|+..++ .+......++-++++.++++.|++.|.+.| ++++. ...-+.+.+++.. ...+.+.|.+.||.+..
T Consensus 420 alAval--kea~~~efk~Ya~QVv~NAkaLA~~L~~~G-~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn 496 (586)
T PLN02271 420 ALAIAL--KQVATPEYKAYMQQVKKNAQALASALLRRK-CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKT 496 (586)
T ss_pred HHHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHHHCC-CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccc
Confidence 555454 333334457889999999999999999998 99984 2333456666532 67777888888997743
Q ss_pred --------ecCCeEEEEeccCCC----HHHHHHHHHHHh
Q 002263 390 --------VDSNTVTASFDETTT----LEDVDKLFIVFA 416 (946)
Q Consensus 390 --------~~~~~lris~~~~~t----~edid~ll~~l~ 416 (946)
..++.||+...+.++ ++|++++.+.+.
T Consensus 497 ~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 497 AIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred cCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 235779999887664 467777666654
No 404
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.54 E-value=1.7e-12 Score=149.88 Aligned_cols=257 Identities=18% Similarity=0.184 Sum_probs=159.0
Q ss_pred CCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-CCC--CCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHH
Q 002263 567 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGN--INIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEI 640 (946)
Q Consensus 567 ~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~g~--~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I 640 (946)
++++|++++..++.+...++..|++++.++.+. +|. .|+++|+++++ +++++|++++|+ .+|.+-+ ++++|
T Consensus 111 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 111 PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCCCCccCCHHHHHHH
Confidence 467899988877666666788999999999863 342 36899999886 688999999994 7898752 58999
Q ss_pred HHHHHHcCCEEEEeccccccc-cc--ccCCCcc-C-CC--EEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCcc
Q 002263 641 CKIIHDNGGQVYMDGANMNAQ-VG--LTSPGYI-G-AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPV 712 (946)
Q Consensus 641 ~~ia~~~g~ll~vD~a~~~a~-~g--l~~pg~~-G-aD--i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v 712 (946)
+++|+++|+++++|.++..-. .+ ......+ + .| +++.|++|+|+.| |.++|++.+. +.+...+-..
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~----G~R~G~~~~~~~~~~~~~~~~-- 261 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSAC----GARIGCLISKNKELIAAAMKL-- 261 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCC----CcceEEEecCCHHHHHHHHHH--
Confidence 999999999999998753110 11 0011111 2 22 6667888988643 6789998875 3444322100
Q ss_pred ccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeee
Q 002263 713 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHE 792 (946)
Q Consensus 713 ~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e 792 (946)
. . ...+.+...+ .++..++. .+.+-+++..+....+.+++.+.|+++..+.+..+.+.++
T Consensus 262 ----------~-~--~~~~~s~~~q----~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~-- 321 (397)
T PRK07568 262 ----------C-Q--ARLSPPTLEQ----IGAAALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFY-- 321 (397)
T ss_pred ----------h-h--ccCCCCcHHH----HHHHHHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceE--
Confidence 0 0 0112111111 11222222 2334455555556677888888887742222222223221
Q ss_pred EEEecccccccCCCCHHHHHHHHHH------CCcccC-CCCC---CC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 793 FIVDLRGLKNTAGIEPEDVAKRLMD------YGFHGP-TMSW---PV--PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 793 ~v~~~~~~~~~~g~~~~~i~~~L~~------~Gi~~~-~~~~---p~--~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++++++ ..+..+++++|.+ +|+.+. ...| |. ++++|+++. .+.+++++.++.|.+++++.
T Consensus 322 ~~~~l~------~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 322 IIAKLP------VDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred EEEecC------CCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHh
Confidence 345554 1257788888875 577743 2223 21 368999986 35788999999888877653
No 405
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.54 E-value=3.4e-12 Score=147.40 Aligned_cols=289 Identities=24% Similarity=0.323 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCCEEEEE---
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVSV--- 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~~vv~v--- 595 (946)
+...++.++++++.|.+.+ +..++|++++++++.+++.+....+. .+++|++ ..+.||.......+.+......
T Consensus 81 ~~~~~la~~l~~~~~~~~v-~~~~gg~eA~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (396)
T PRK02627 81 EPQEELAEKLVELSGMDKV-FFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFE 158 (396)
T ss_pred HHHHHHHHHHHhhcCCCEE-EECCCcHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCC
Confidence 3455788899998888654 56678888887777777765422221 1255664 4677888777655554332211
Q ss_pred cCCCCC----CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc---cCHHHHHHHHHHcCCEEEEecccccccccccCC
Q 002263 596 GTDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 667 (946)
Q Consensus 596 ~~~~~g----~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p 667 (946)
+...+. ..|++++++++. +++++|+++.++ ..|+.. ..+++|.++|++||+++++|.++. ++.+.
T Consensus 159 ~~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~----g~g~~ 231 (396)
T PRK02627 159 PLVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT----GMGRT 231 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc----CCCcc
Confidence 111111 128999999995 789999998763 556432 248999999999999999999753 23222
Q ss_pred C------ccC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 668 G------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 668 g------~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
+ ..| .|++++ .|+++ +|.++|++.+++++.+.+.... .....+. +..
T Consensus 232 g~~~~~~~~~~~pdi~t~--sK~~~-----~G~rig~~~~~~~~~~~~~~~~--------------~~~t~~~----~~~ 286 (396)
T PRK02627 232 GKLFAYQHYGIEPDIMTL--AKGLG-----GGVPIGAVLAKEKVADVFTPGD--------------HGSTFGG----NPL 286 (396)
T ss_pred CceeeehhcCCCCCEEEE--cchhh-----CCcccEEEEEcHHHHhccCCCC--------------CCCCCCC----CHH
Confidence 1 223 577654 48774 4567999999887765542100 0111222 333
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHHHHH
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
..+++.+.|..+..+++. ++...+.++++++|.+. +... ..+ .+.+ +.+.+. .+..++.++
T Consensus 287 ~~~aa~~~l~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~i~~~-------~~~~~~~~~ 352 (396)
T PRK02627 287 ACAAALAVIEIIEEEGLL---ENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLM---IGIELD-------RPAAEIVKK 352 (396)
T ss_pred HHHHHHHHHHHHhhccHH---HHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEE---EEEEec-------CcHHHHHHH
Confidence 444555666655444443 33445566777766653 2211 111 1211 334432 256889999
Q ss_pred HHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 815 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 815 L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
|.++|+.+.... .+.+|++|+...++++++++++.|++++++
T Consensus 353 l~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 353 ALEKGLLINVTG---DNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHHCCeEEeecC---CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 999999874322 377999998888999999999999988764
No 406
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.54 E-value=1e-12 Score=153.43 Aligned_cols=273 Identities=14% Similarity=0.106 Sum_probs=170.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCC
Q 002263 539 SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDN 618 (946)
Q Consensus 539 ~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~ 618 (946)
.+..++|++. +..++++.+. .+++.|+++++.++.+...+++.|++++.+|++++| +|+++|+++++ ++
T Consensus 143 ~Iiit~G~~~--al~~~~~~l~-----~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~---~~ 211 (431)
T PRK15481 143 EIDLTSGAID--AIERLLCAHL-----LPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALA---QG 211 (431)
T ss_pred eEEEecCcHH--HHHHHHHHhC-----CCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHh---cC
Confidence 4445555542 2333444432 256889999998777777899999999999997666 89999999997 56
Q ss_pred eEEEEEe-CC-Cccccccc--CHHHHHHHHHHc-CCEEEEeccccccc-ccccCCC--ccCCCEEEeCCCcccccCCCCC
Q 002263 619 LSTLMVT-YP-STHGVYEE--GIDEICKIIHDN-GGQVYMDGANMNAQ-VGLTSPG--YIGADVCHLNLHKTFCIPHGGG 690 (946)
Q Consensus 619 t~~vvvt-~P-n~~G~~~~--~i~~I~~ia~~~-g~ll~vD~a~~~a~-~gl~~pg--~~GaDi~~~s~hK~f~~P~g~G 690 (946)
+++++++ +| |.+|.+-+ ..++|.++|+++ +++++.|.++..-. .....+. ...--+++.|+.|+|+ |
T Consensus 212 ~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~---- 286 (431)
T PRK15481 212 ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-P---- 286 (431)
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-C----
Confidence 7788886 78 57898862 245999999999 99999998763111 1111111 1111266778889886 4
Q ss_pred CCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH--hhHHHHHHHHHHHHH
Q 002263 691 GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS--KGLTEASKIAILNAN 768 (946)
Q Consensus 691 GPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~--eGl~~~~~~~~~~a~ 768 (946)
|.++|++.+++++...+... ......+++ .....++..+|. .|. +-+++..+....+.+
T Consensus 287 GlRiG~~i~~~~~~~~~~~~------------~~~~~~~~s------~~~q~a~~~~l~-~~~~~~~l~~~~~~~~~~r~ 347 (431)
T PRK15481 287 DLRLAFVASDSATSARLRLR------------LNSGTQWVS------HLLQDLVYACLT-DPEYQARLAQARLFYAQRRQ 347 (431)
T ss_pred CceeEEEeCCHHHHHHHHHH------------HhccccCCC------HHHHHHHHHHHh-CccHHHHHHHHHHHHHHHHH
Confidence 67899999887665443100 000001111 111112222222 121 124455555667777
Q ss_pred HHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCC---CCEEEEEcCCCCCH
Q 002263 769 YMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV---PGTLMIEPTESESK 843 (946)
Q Consensus 769 ~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p~---~~~lri~~t~~~t~ 843 (946)
++.+.|++. +.+.. +++..+ ++++++ .+..++.++|.++|+.+.. ..|.. .+++||++... +.
T Consensus 348 ~~~~~L~~~~~~~~~--p~gg~f--~~~~l~-------~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~-~~ 415 (431)
T PRK15481 348 KLARALQQYGIAIPS--PGDGLN--LWLPLD-------TDSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTL-ND 415 (431)
T ss_pred HHHHHHHHcCCcccc--CCCeEE--EEEECC-------CCHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCC-Ch
Confidence 888888874 33211 223222 456654 1467899999999998632 23421 35799999763 58
Q ss_pred HHHHHHHHHHHHHHH
Q 002263 844 EELDRYCDALISIRE 858 (946)
Q Consensus 844 ~eid~~~~aL~~i~~ 858 (946)
++++++++.|.+++.
T Consensus 416 ~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 416 AEINRLAADLHQALN 430 (431)
T ss_pred HHHHHHHHHHHHHhc
Confidence 899999999988753
No 407
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.54 E-value=4.4e-13 Score=150.82 Aligned_cols=270 Identities=17% Similarity=0.166 Sum_probs=168.9
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++++++++|.+...+..++|++..+..+ .+.+ . ++ +|+++...|..+...+...|++++.++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~--~~~l--~----~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~------ 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLL--PRLL--A----PG-RVLVLAPTYSEYARAWRAAGHEVVELP------ 114 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHH--HHHh--C----CC-eEEEeCCCcHHHHHHHHHcCCEEEEeC------
Confidence 5788999999998755555555554322222 2221 1 34 588887777667777889999999987
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccccccccCCC----ccCCCEE
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG----YIGADVC 675 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg----~~GaDi~ 675 (946)
|+++++++++ +++++++++| |.+|.+-+ .+++|+++|+++|+++++|.++...... .... ..+-+++
T Consensus 115 -d~~~l~~~~~----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~i~ 188 (330)
T TIGR01140 115 -DLDRLPAALE----ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD-ASLAPQAARFPGLVV 188 (330)
T ss_pred -CHHHHHhhcc----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc-cchhhHhccCCCEEE
Confidence 7899998884 4668888999 57898861 3788889999999999999986321111 0111 1244688
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+.+++|+|+.| |-++|++++++++...+.... ....++ .....++..++. ..+
T Consensus 189 ~~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~~--------------~~~~~s------~~~q~~~~~~l~---~~~ 241 (330)
T TIGR01140 189 LRSLTKFFGLA----GLRLGFVVAHPALLARLREAL--------------GPWTVN------GPARAAGRAALA---DTA 241 (330)
T ss_pred EEecchhhcCc----hhhhhheeCCHHHHHHHHhcC--------------CCCCch------HHHHHHHHHHHh---chH
Confidence 88999998543 566799999877665442110 001111 111222223332 233
Q ss_pred H-HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC-CCCCC--CCC
Q 002263 756 L-TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-TMSWP--VPG 831 (946)
Q Consensus 756 l-~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~-~~~~p--~~~ 831 (946)
+ ++..++...+.+++.+.|++.-.+...+..+ .+ ++++++ +..+++++|.++|+.+. ...|+ ..+
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~f--~~~~~~--------~~~~l~~~l~~~gi~v~pg~~f~~~~~~ 310 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGGLEVVGGTA-LF--LLVRTP--------DAAALHEALARRGILIRDFDNFPGLDPR 310 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-eE--EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCC
Confidence 3 3445556677788888888752232222212 22 445543 35789999999999853 33344 246
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~ 854 (946)
++||+++. ..++ ++|+++|+
T Consensus 311 ~iRi~~~~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 311 YLRFALPT--DEEN-DRLEEALA 330 (330)
T ss_pred EEEEEecC--HHHH-HHHHHhhC
Confidence 89999863 2344 88888763
No 408
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.54 E-value=4.9e-13 Score=152.26 Aligned_cols=275 Identities=15% Similarity=0.112 Sum_probs=164.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.+ ...+..++|+.+..+++.++ . +++++||++...|+..... +...|++++.++.
T Consensus 53 ~~~Le~~lA~l~~--~~~v~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 53 WRALEAALGELEG--AEALVFPSGMAAITAVLRAL---L-----RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred HHHHHHHHHHHcC--CCEEEECCHHHHHHHHHHHh---c-----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 3467888999883 23355667776553333322 1 2568899987655443332 2347999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
++++ + .+. +++++|++++|+ ++|.+. |+++|+++||++|++++||+++.... ...|.++|+|+++
T Consensus 123 ~~~~----~----~~~---~~t~lV~le~p~NPtg~v~-di~~I~~~a~~~g~~lvVD~t~~~~~--~~~p~~~g~Divv 188 (366)
T PRK07582 123 AGMA----E----AAL---AGADLVLAETPSNPGLDVC-DLAALAAAAHAAGALLVVDNTTATPL--GQRPLELGADLVV 188 (366)
T ss_pred CChH----H----Hhc---cCceEEEEECCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCCCCcc--ccCchhcCCcEEE
Confidence 5332 1 222 688999999995 678777 79999999999999999999864222 2356678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.++||+++.| +|-.+|+++++ +.+.+.+... + ..++. +.+ . ..+|..++.+ +-
T Consensus 189 ~S~sK~l~G~---~g~~~G~v~~~~~~l~~~l~~~------------~-~~~g~-~~~----~---~~a~l~~r~l--~t 242 (366)
T PRK07582 189 ASDTKALTGH---SDLLLGYVAGRDPELMAAVERW------------R-LLAGA-IPG----P---FEAWLAHRSL--GT 242 (366)
T ss_pred ecccccccCC---CCeeEEEEEcCcHHHHHHHHHH------------H-HHhCC-CCC----H---HHHHHHHhcc--cc
Confidence 9999998421 22346888875 4444332110 0 00011 111 1 1234333333 33
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeeccCC-Cc-----------eeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 756 LTEASKIAILNANYMAKRLEKHY---PILFRGVN-GT-----------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~-~~-----------~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
+..+.++..+++..+++.|+++. .+.|++-. .+ ..-.+.|++. +.+++.+.|...++
T Consensus 243 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~~~~~~~~~~~l~~ 314 (366)
T PRK07582 243 LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------DAAAAERFVAASRL 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------CHHHHHHHHHhCCc
Confidence 55556777789999999999762 34455421 11 1112334432 34556666665566
Q ss_pred ccCCCCC---------C------C-CCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 821 HGPTMSW---------P------V-PGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 821 ~~~~~~~---------p------~-~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
.....+| + + ++.+|+++.....++.|+.|.++|.
T Consensus 315 ~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 315 VVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred ceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 4321110 0 1 3579999987666666666666664
No 409
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.54 E-value=3.7e-14 Score=156.76 Aligned_cols=154 Identities=18% Similarity=0.238 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 176 (946)
..+.++|+.+|+++|++.+ ..+++|+|.+..++++++. . +||+|++++.+|+++...+.. .|++++++++
T Consensus 59 g~i~~~~~~~A~~~ga~~~-~~~~~Gst~a~~~~l~al~-~--~gd~Vlv~~~~h~s~~~~~~~----~g~~~~~v~~~~ 130 (294)
T cd00615 59 GPIKEAQELAARAFGAKHT-FFLVNGTSSSNKAVILAVC-G--PGDKILIDRNCHKSVINGLVL----SGAVPVYLKPER 130 (294)
T ss_pred hHHHHHHHHHHHHhCCCCE-EEEcCcHHHHHHHHHHHcC-C--CCCEEEEeCCchHHHHHHHHH----CCCEEEEecCcc
Confidence 4578899999999998752 2247888888888877653 3 899999999999999988753 4677766543
Q ss_pred ------------ccccc-c--CCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccc-----cCCC-CCCCc
Q 002263 177 ------------KDIDY-K--SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-----TILK-PPGEL 235 (946)
Q Consensus 177 ------------~~l~~-i--~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al-----~~l~-~~~~~ 235 (946)
+++++ + .+++++|++++||++|.+.|+++|+++||++|++++|+. .++. +.++ ...++
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDe-A~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDE-AHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEEC-cchhhhccCcccCcchhhc
Confidence 34544 4 357899999999999999999999999999999999942 2221 1111 23457
Q ss_pred cceEEEecc-ccccccCCCCCCceEEEEEchh
Q 002263 236 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE 266 (946)
Q Consensus 236 GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~ 266 (946)
|+|++++|+ |++++| +++|+++++++
T Consensus 210 ~~div~~S~hK~l~g~-----~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTLPAL-----TQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhcccchH-----hHHHHHHhCCC
Confidence 999999999 666433 23567766654
No 410
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.54 E-value=8.3e-13 Score=150.21 Aligned_cols=282 Identities=12% Similarity=0.083 Sum_probs=171.2
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-C
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-G 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~-g 601 (946)
.++++.+++.+|.+...+..+.|++. +..++++.+ . +++ ++++.+.+..+...+++.|.+++.+|.+++ +
T Consensus 58 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~l--~----~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (356)
T PRK08056 58 RHLHQALARHHQVPASWILAGNGETE--SIFAVVSGL--K----PRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADG 128 (356)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHHHh--C----CCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccC
Confidence 57788899999988766666666542 233334432 1 234 455555443444557889999999998653 3
Q ss_pred -CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEeccccccc-cc--ccCC-CccCC
Q 002263 602 -NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSP-GYIGA 672 (946)
Q Consensus 602 -~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~-~g--l~~p-g~~Ga 672 (946)
.+| +++.+.+. +++++|++++| |.+|.+- + +++|+++|+++|+++++|+++..-. .+ ..++ ....-
T Consensus 129 ~~~~-~~~~~~~~---~~~k~v~l~~p~NPTG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 129 WQLT-DAILEALT---PDLDCLFLCTPNNPTGLLP-ERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred CCcc-HHHHHhcc---CCCCEEEEeCCcCCCCCCC-CHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 445 45555564 78889999999 5789876 4 8899999999999999999852110 11 0011 12334
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
++++.|++|+|++| |.++|+++++ +++...+-.. . ...+.+ .....++...+ -
T Consensus 204 ~i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~~~--------------~--~~~~~~----~~~~~~a~~~l--~ 257 (356)
T PRK08056 204 LWVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMRRQ--------------Q--MPWSIN----AFAALAGEVIL--Q 257 (356)
T ss_pred EEEEEechhhccCc----chhheeeecCCHHHHHHHHHh--------------C--CCCchh----HHHHHHHHHHh--C
Confidence 67889999999754 7889999874 3443322100 0 011111 11111111222 1
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC--
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP-- 828 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p-- 828 (946)
+.+-+++..+....+.+++.+.|++...+....+.+ .+ +++++. .+..++++.|.++||.+.. ..|+
T Consensus 258 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-~~--~~~~~~-------~~~~~~~~~l~~~gI~v~~~~~f~~~ 327 (356)
T PRK08056 258 DRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRA-NY--LFLRCE-------RPDIDLQRALLTQRILIRSCANYPGL 327 (356)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCC-cE--EEEEcC-------CChHHHHHHHHHCCeEEEECCCCCCC
Confidence 222233444555677788888887642221112222 22 445543 2357899999999998643 2343
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.++++||++. +.++.++|+++|+++.
T Consensus 328 ~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 328 DSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred CCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 2468999984 6789999999998763
No 411
>PRK05939 hypothetical protein; Provisional
Probab=99.54 E-value=8.5e-13 Score=151.43 Aligned_cols=142 Identities=16% Similarity=0.185 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|+|.|.+. +.++.+|++++.++++++ +. +||+||+++..|+++...+.. ++..|++++++|..
T Consensus 49 ~~~lE~~la~leg~~~--~v~~ssG~~Ai~~~l~al-l~--~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e 122 (397)
T PRK05939 49 TAALEAKITKMEGGVG--TVCFATGMAAIAAVFLTL-LR--AGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQ 122 (397)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHH-cC--CCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHH
Confidence 4457789999999876 677888898888777665 33 899999999999988777655 34689999998764
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccc
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 249 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~ 249 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++||. .++.+....|.++|+|+++.|. |.|++
T Consensus 123 ~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~-t~a~~~~~~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 123 NVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDN-TMTSPWLFRPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred HHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEEC-CcccccccCccccCCEEEEecCeecccC
Confidence 4556 7889999999987 789999999999999999999999953 3444444567789999999998 77753
No 412
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=2.4e-12 Score=146.30 Aligned_cols=268 Identities=15% Similarity=0.114 Sum_probs=178.2
Q ss_pred HHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc----
Q 002263 103 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---- 178 (946)
Q Consensus 103 e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~---- 178 (946)
++++.+|++++.++.++.+++|++.++..++.++. . +||+|++++-.|+.+...+ +..|++++.++.++
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~-~--~gd~vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF-N--HDRPLLFPDITYSFYPVYA----GLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc-C--CCCEEEEeCCCHHHHHHHH----HHcCCEEEEeecCCCCCC
Confidence 67789999999999999999999977766655542 3 8999999999987665543 34688888887642
Q ss_pred -ccccCCCEeEEEEEcC-CCceeecchHHHHHHHHhC-CcEEEEEecCccccCC---CCCCCccceEEEecc-ccccccC
Q 002263 179 -IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTIL---KPPGELGADIVVGSA-QRFGVPM 251 (946)
Q Consensus 179 -l~~i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~-gal~~v~a~~~al~~l---~~~~~~GaDi~v~s~-k~lg~P~ 251 (946)
++++...+++|++.+| |.+|.+.+.+++.++++.+ |++++++.....++.- .......-.++++|. |.|+.|
T Consensus 137 d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~- 215 (353)
T PRK05387 137 DVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLA- 215 (353)
T ss_pred CHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcch-
Confidence 2223345678888888 6799999999999999876 8888885311112110 001122346888886 888644
Q ss_pred CCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH
Q 002263 252 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 331 (946)
Q Consensus 252 ~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl 331 (946)
|..+||++.++++++.+.. .+...+..+.+.+ +..++. ..+...+.+
T Consensus 216 ---GlR~G~~~~~~~~~~~l~~----------------------------~~~~~~~~~~~~~-~q~~~~-~~l~~~~~~ 262 (353)
T PRK05387 216 ---GLRVGFAIGHPELIEALNR----------------------------VKNSFNSYPLDRL-AQAGAI-AAIEDEAYF 262 (353)
T ss_pred ---hhhceeeecCHHHHHHHHH----------------------------hhccCCCCCcCHH-HHHHHH-HHhcCHHHH
Confidence 3457999888777655410 0000000011111 111111 112233456
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeeec----CCeEEEEeccCCCH
Q 002263 332 KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD----SNTVTASFDETTTL 405 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~----~~~lris~~~~~t~ 405 (946)
++..++..++.+++.+.|+++| +++.... ..-+.+..++ +.++.+.|.++||.++... ++.+|++++ +.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~ 337 (353)
T PRK05387 263 EETRAKVIATRERLVEELEALG-FEVLPSK-ANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TD 337 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CeECCCc-CcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CH
Confidence 7788888889999999999987 8765321 1223445543 7889999999999986542 368999987 67
Q ss_pred HHHHHHHHHHh
Q 002263 406 EDVDKLFIVFA 416 (946)
Q Consensus 406 edid~ll~~l~ 416 (946)
+++++++++|.
T Consensus 338 ~~~~~~~~~L~ 348 (353)
T PRK05387 338 EEMEALVDALK 348 (353)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 413
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.3e-12 Score=139.89 Aligned_cols=140 Identities=26% Similarity=0.275 Sum_probs=112.8
Q ss_pred HHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc---cc
Q 002263 104 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---ID 180 (946)
Q Consensus 104 ~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~---l~ 180 (946)
+++.||.|-|.-. +.-+.+|.+|....++.+. +.||+||.+...+..+...+....+++||+++++|.++ ++
T Consensus 67 lE~RiAaLEGG~a--a~a~aSG~AA~~~ai~~la---~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 67 LEERIAALEGGVA--ALAVASGQAAITYAILNLA---GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred HHHHHHHhhcchh--hhhhccchHHHHHHHHHhc---cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 4578999998644 3344566666554444332 28999999999998888777665678999999998754 55
Q ss_pred c-cCCCEeEEEEEc-CCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccc
Q 002263 181 Y-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 249 (946)
Q Consensus 181 ~-i~~~t~~v~v~~-pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~ 249 (946)
+ |+++|++|++.. .|.-+.+.|+++|+++||++|++++|+ +.++-+.+..|-+.|||||+.|. |++|+
T Consensus 142 ~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVD-NT~atpyl~rP~~hGADIVvHS~TK~igG 212 (426)
T COG2873 142 AAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVD-NTFATPYLCRPIEHGADIVVHSATKYIGG 212 (426)
T ss_pred HHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEe-cCCCcceecchhhcCCCEEEEeecccccC
Confidence 6 899999999865 689999999999999999999999994 56677778899999999999998 77764
No 414
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.54 E-value=4.1e-13 Score=154.06 Aligned_cols=286 Identities=15% Similarity=0.054 Sum_probs=177.6
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+ +..++|+.+...+++++ . +++++||++...|+.+.. .+...|++++.++.
T Consensus 67 ~~~Le~~lA~l~g~~~~-l~~~sgt~Ai~~~l~al---~-----~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 67 SLALAQRLAEIEGGRHA-LLQPSGLAAISLVYFGL---V-----KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred HHHHHHHHHHHhCCCeE-EEeccHHHHHHHHHHHH---h-----CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 45788999999998754 44566776664444433 1 256899999988876553 35678999998874
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
. |.++++++++ ++|++|++++|+ .+|... |+++|+++||++|+++++|+++. .+.+.+|.+.|+|+++
T Consensus 138 ~-----~~~~l~~~i~---~~tklV~le~p~Np~~~~~-di~~I~~ia~~~gi~livD~a~a--~~~~~~~l~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ---PNTRLIWLEAPGSVTMEVP-DVPAITAAARARGVVTAIDNTYS--AGLAFKPFEHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCccHh-hHHHHHHHHHHcCCEEEEECCcc--cccccCHHHcCCeEEE
Confidence 2 4578888886 789999999994 678777 89999999999999999999864 3344677788999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|++|+++. +++.-+|.++++ +++.+.+... + +.++. +. ....+ ++..-|-+.
T Consensus 207 ~S~tK~~~g---~~~~~gG~v~~~~~~~~~~~~~~------------~-~~~G~-~~-------~~~~a--~l~lr~l~t 260 (394)
T PRK07050 207 QALTKYQSG---GSDVLMGATITADAELHAKLKLA------------R-MRLGI-GV-------SADDC--SLVLRGLPS 260 (394)
T ss_pred EECCceecC---CCCeeEEEEEECCHHHHHHHHHH------------H-HhcCC-CC-------CHHHH--HHHHcCCCc
Confidence 999999852 222235655554 4444332100 0 00111 11 11123 333444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeeccCCC------------ceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 756 LTEASKIAILNANYMAKRLEKHY---PILFRGVNG------------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~------------~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
+..+.++...+|..+++.|+++. .+.+++-.. ...+.+.|.+.... ...+..++.++|...++
T Consensus 261 l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~l~~~~~ 338 (394)
T PRK07050 261 LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEALELFAI 338 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHcCCCCee
Confidence 66667777888999999998752 233333100 12233444443100 01234566666665544
Q ss_pred cc--CC---CCCC-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 821 HG--PT---MSWP-------------VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 821 ~~--~~---~~~p-------------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
-. +. +-.| .++.+|+++.. |+.|.+++.|.++++.
T Consensus 339 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 339 GWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred ccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 22 11 0001 12578999864 4566777777766654
No 415
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.54 E-value=5.3e-13 Score=152.07 Aligned_cols=210 Identities=17% Similarity=0.093 Sum_probs=139.9
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+. ..++|..|..++++++. +++++||+++..++..... ....|+++..++.
T Consensus 52 ~~~lE~~lA~l~g~~~~~-~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 52 HFALQDAMCELEGGAGCY-LYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred HHHHHHHHHHHhCCCcEE-EECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 346889999999987653 45566666544444331 2568899887755433321 3457888888754
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ +.++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+.+|.++|+|+++
T Consensus 123 ~-----~~e~l~~~i~---~~tklV~lesp~Np~g~~~-dl~~I~~la~~~g~~livD~t~a~--g~~~~pl~~gaDivv 191 (377)
T TIGR01324 123 L-----IGEDIATLIQ---PNTKVLFLEAPSSITFEIQ-DIPAIAKAARNPGIVIMIDNTWAA--GLLFKPLEHGVDISI 191 (377)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--ccccCccccCceEEE
Confidence 2 2378888886 78999999999 4688887 899999999999999999998753 334568889999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.|++|+++.+ ++-.+|++++++++...+-... +..+. ......+|..++. -+-+
T Consensus 192 ~S~tK~l~G~---~d~~gG~v~~~~~~~~~l~~~~-------------~~~G~--------~l~p~~a~~~~rg--l~tl 245 (377)
T TIGR01324 192 QAGTKYLVGH---SDIMIGTVVANARTWDQLREHS-------------YLMGQ--------MVDADDAYTTLRG--LRTL 245 (377)
T ss_pred ecCceeccCC---CCceEEEEEeCHHHHHHHHHHH-------------HHhCC--------CCCHHHHHHHHhh--hhhH
Confidence 9999999522 2233678887765433221000 00011 1111224444433 3344
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 002263 757 TEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~ 777 (946)
..+.++..++|..+++.|+++
T Consensus 246 ~~R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 246 GVRLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 445677788888999999875
No 416
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.54 E-value=8.8e-13 Score=152.64 Aligned_cols=143 Identities=17% Similarity=0.136 Sum_probs=112.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|...+ +.+++|+.|...++.++ . .++++||++...|+..... +...|++++.+++
T Consensus 66 ~~~le~~lA~l~g~~~a-v~~sSGt~Al~~al~~l---l-----~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALEGGVGA-IATASGQAALHLAIATL---M-----GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 56888999999998764 56777876664444333 1 2468899988876644332 2447999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++|+ ++|++|+++.| |.+|.+. |+++|+++||++|+++++|+++..+. +..|-++|+|+++
T Consensus 137 ~-----d~~~l~~~i~---~~TklV~~e~~~np~g~v~-Di~~I~~la~~~gi~livD~t~a~~~--~~~pl~~GaD~vv 205 (433)
T PRK08134 137 G-----DIDGWRAAIR---PNTRLLFGETLGNPGLEVL-DIPTVAAIAHEAGVPLLVDSTFTTPY--LLRPFEHGADLVY 205 (433)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCcccCccc-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhcCCCEEE
Confidence 4 8999999997 89999999998 4688888 89999999999999999999865333 3567788999999
Q ss_pred eCCCcccc
Q 002263 677 LNLHKTFC 684 (946)
Q Consensus 677 ~s~hK~f~ 684 (946)
.|.||+++
T Consensus 206 ~S~tK~l~ 213 (433)
T PRK08134 206 HSATKFLG 213 (433)
T ss_pred eccccccC
Confidence 99999984
No 417
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.54 E-value=1.6e-12 Score=149.86 Aligned_cols=296 Identities=13% Similarity=0.107 Sum_probs=179.3
Q ss_pred cccHHHHHHHHHHHHHHhhCCC----cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD----SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 589 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~----~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G 589 (946)
.+|..++...+.+++.+.+|.+ .. .+..++|++. +..++++.+. .+| ...+|+++...+..+...+.+.|
T Consensus 63 ~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~--al~~~~~~l~-~~g--d~~~vlv~~P~y~~~~~~~~~~g 137 (393)
T TIGR03538 63 TKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE--ALFAFAQAVI-NPG--QAPLVVMPNPFYQIYEGAALLAG 137 (393)
T ss_pred CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH--HHHHHHHHHc-CCC--CcceEEecCCCCcchHHHHHhcC
Confidence 4677677767777777765643 32 4555556542 2233344332 222 12358999887777777788999
Q ss_pred CEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc
Q 002263 590 MKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG 663 (946)
Q Consensus 590 ~~vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g 663 (946)
.+++.++++++ ..+|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+
T Consensus 138 ~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 214 (393)
T TIGR03538 138 AEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDE 214 (393)
T ss_pred CeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCC
Confidence 99999999654 4689999999986 57899999999 5788875 248999999999999999999864211 11
Q ss_pred -ccCC------CccCCC-----EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcc
Q 002263 664 -LTSP------GYIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 731 (946)
Q Consensus 664 -l~~p------g~~GaD-----i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~ 731 (946)
...+ ...+.| +++.|+.|.|+. .|.++|++.+++++...+-.. ......+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~----~GlRvG~~i~~~~l~~~~~~~--------------~~~~~~~ 276 (393)
T TIGR03538 215 GNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL----PGLRSGFVAGDAEILKAFLRY--------------RTYHGCA 276 (393)
T ss_pred CCCCcCHHHhcccccccccccEEEEecchhhcCC----cccceEEEecCHHHHHHHHHH--------------HHhhccC
Confidence 0011 112221 566778887754 478899999887665433100 0000111
Q ss_pred cCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHH
Q 002263 732 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 811 (946)
Q Consensus 732 ~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i 811 (946)
.+...+. ++.+.+ ...+-+++..+...++.+.+.+.|++.+.+.. +.+..+ ++++++ .+..++
T Consensus 277 ~~~~~q~----~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--p~gg~f--~~~~~~-------~~~~~~ 339 (393)
T TIGR03538 277 MPIPTQL----ASIAAW--NDEQHVRENRALYREKFAAVLEILGQVLDLEL--PDAGFY--LWPKVP-------GDDEAF 339 (393)
T ss_pred cCHHHHH----HHHHHh--cChHHHHHHHHHHHHHHHHHHHHHHhhCcccC--CCeeEE--EEEECC-------CCHHHH
Confidence 1111111 111111 12233555555556677778888877543321 122222 455653 245788
Q ss_pred HHHHH-HCCccc-CCCCC--------CCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 812 AKRLM-DYGFHG-PTMSW--------PVPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 812 ~~~L~-~~Gi~~-~~~~~--------p~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
+++|. ++|+.+ +...| +..+++||+++. +.++++..++.|++
T Consensus 340 ~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 340 ARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRS 391 (393)
T ss_pred HHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 88886 579975 22222 124689999864 57777777777754
No 418
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.54 E-value=5.5e-13 Score=153.55 Aligned_cols=212 Identities=21% Similarity=0.198 Sum_probs=144.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+. .+..++|+.+..++++++. .++++|+++...|+.+... +...|++++.++.
T Consensus 66 ~~~Le~~iA~~~g~~~-~l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 66 STEVENKLALLEGGEA-AVVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 4478899999999774 3566777766544433321 2568899998877765443 4678999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc--CCEEEEecccccccccccCCCccCCCE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++ |+++++|+++... .+..|..+|+|+
T Consensus 137 ~-----d~e~l~~~i~---~~tklI~iesP~NPtG~v~-dl~~I~~la~~~~~~i~livDea~~~~--~~~~~l~~g~Di 205 (400)
T PRK06234 137 S-----NLEEVRNALK---ANTKVVYLETPANPTLKVT-DIKAISNIAHENNKECLVFVDNTFCTP--YIQRPLQLGADV 205 (400)
T ss_pred C-----CHHHHHHHhc---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHhcCCCCEEEEECCCCch--hcCCchhhCCcE
Confidence 3 8999999997 78999999999 4789988 799999999997 9999999986422 234566779999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
++.|++|+|+.+ |...+|++++++++.+.+... +. + ..++. +.+ . ..+|.. ..|-+
T Consensus 206 vv~S~sK~l~g~---g~~~gG~v~~~~~~~~~l~~~--~~--------~-~~~g~-~l~----p---~~a~l~--~~~l~ 261 (400)
T PRK06234 206 VVHSATKYLNGH---GDVIAGFVVGKEEFINQVKLF--GI--------K-DMTGS-VIG----P---FEAFLI--IRGMK 261 (400)
T ss_pred EEeeccccccCC---CCceeEEEEecHHHHHHHHHH--HH--------H-HhcCC-CCC----H---HHHHHH--HhccC
Confidence 999999998522 112358998887665543210 00 0 00111 111 1 112333 33333
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 002263 755 GLTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~ 777 (946)
-+..+.++..+++.++++.|+++
T Consensus 262 tl~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 262 TLQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC
Confidence 34456666778999999999875
No 419
>PLN02509 cystathionine beta-lyase
Probab=99.54 E-value=3.2e-13 Score=156.62 Aligned_cols=216 Identities=19% Similarity=0.205 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~ 596 (946)
...+++++++++.|.+.+ +..++|..+. +.++.+ . +++|+||++...|+.+... +...|++++.++
T Consensus 134 t~~aLE~~lA~leg~e~a-i~~~SG~aAi-~~il~l----l----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd 203 (464)
T PLN02509 134 TRDALESLLAKLDKADRA-FCFTSGMAAL-SAVTHL----I----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN 203 (464)
T ss_pred HHHHHHHHHHHHhCCCEE-EEeCcHHHHH-HHHHHH----h----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeC
Confidence 356788999999987754 4446665443 322221 1 2568999998887766533 456799999886
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
. .|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.... +..|..+|+|++
T Consensus 204 ~-----~d~e~l~~ai~---~~TklV~lesPsNPtG~i~-Dl~~I~~lAk~~g~~lIVD~A~a~~~--~~~pl~~gaDiv 272 (464)
T PLN02509 204 T-----TNLDEVAAAIG---PQTKLVWLESPTNPRQQIS-DIRKIAEMAHAQGALVLVDNSIMSPV--LSRPLELGADIV 272 (464)
T ss_pred C-----CCHHHHHHhCC---cCCeEEEEECCCCCCCCHH-HHHHHHHHHHHcCCEEEEECCccccc--cCChhhcCCcEE
Confidence 4 47899999996 78999999999 5789987 89999999999999999999864332 356777899999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEeccc-CCCCCCCccccCCCCCCCCCCCCCC-CcccCccchhhHHHHHHHHHHHHcH
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~lp~~~v~~~~d~~~~~~~~~~~-~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
++|++|+++.| |+...|++++++.. ...+. .. + +..+ .++ . ..||.. ..|-
T Consensus 273 v~S~tK~l~G~---gdv~gG~v~~~~~~l~~~~~--~~----------~-~~~g~~l~------p---~~A~l~--lr~L 325 (464)
T PLN02509 273 MHSATKFIAGH---SDVMAGVLAVKGEKLAKEVY--FL----------Q-NSEGSGLA------P---FDCWLC--LRGI 325 (464)
T ss_pred EecCcccccCC---CccceeEEEeccHHHHHHHH--HH----------H-HhcCCCcC------H---HHHHHH--Hhhh
Confidence 99999998522 33346888876432 21110 00 0 0000 111 1 113333 3333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH---YPILFRG 784 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~---~~v~~~~ 784 (946)
+-+..+.++..++|.++++.|+++ -.|.|+|
T Consensus 326 ~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPg 359 (464)
T PLN02509 326 KTMALRIEKQQENARKIAMYLSSHPRVKKVYYAG 359 (464)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 445566777889999999999876 2455665
No 420
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.54 E-value=8.6e-13 Score=152.01 Aligned_cols=212 Identities=18% Similarity=0.189 Sum_probs=142.9
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|+.+...+ ++... +++++||++...|+.... .+...|++++.++.
T Consensus 67 ~~~le~~lA~l~g~~~~-i~~~sG~~Al~~~---l~~ll-----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEGGEAA-VALASGMGAITAT---LWTLL-----RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHH---HHHHc-----CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 45788999999998764 5556777655333 33221 256889998887764333 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....|..+|+|+++
T Consensus 138 ~-----d~~~l~~~i~---~~tklV~le~p~NPtG~~~-di~~I~~la~~~gi~lIvD~a~a~~--~~~~~l~~g~Di~v 206 (403)
T PRK07503 138 T-----DPAALKAAIS---DKTRMVYFETPANPNMRLV-DIAAVAEIAHGAGAKVVVDNTYCTP--YLQRPLELGADLVV 206 (403)
T ss_pred C-----CHHHHHHhcC---ccCcEEEEeCCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 3 7999999996 78999999998 5789987 8999999999999999999986432 23456568999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.|++|+|+.+ |+..+|+++.++++...+... +. + ..++ .+.+ .. .||..+ -|-+-+
T Consensus 207 ~S~tK~l~g~---gd~~gG~v~~~~~l~~~l~~~--~~--------~-~~~g-~~~s----~~---~a~l~l--~~L~tl 262 (403)
T PRK07503 207 HSATKYLGGH---GDITAGLVVGGKALADRIRLE--GL--------K-DMTG-AVMS----PF---DAFLLM--RGLKTL 262 (403)
T ss_pred ccccccccCC---CceeEEEEEcCHHHHHHHHhh--hH--------H-hCcC-CCCC----HH---HHHHHH--cCcchH
Confidence 9999998521 223478888776655443210 00 0 0011 1111 11 123222 233334
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 002263 757 TEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~ 777 (946)
..+.++..+++..+++.|+++
T Consensus 263 ~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 263 ALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 455566678999999999875
No 421
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.53 E-value=4.6e-12 Score=146.78 Aligned_cols=312 Identities=14% Similarity=0.135 Sum_probs=179.5
Q ss_pred ccHHHHHHHHHHHHHHhhCC--CcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+|..++...+.+++.+..|. +...+..+.|++. ++.++++.+. .++++|+++...++.+...+...|++++
T Consensus 74 ~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~ 146 (409)
T PLN00143 74 GGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH--AAEIIIKVLA-----RPEANILLPRPGFPDVETYAIFHHLEIR 146 (409)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH--HHHHHHHHHc-----CCCCEEEEcCCCCcCHHHHHHHcCCEEE
Confidence 57666665566666555454 3344555556542 3334444432 2568899999988777778899999999
Q ss_pred EEcCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccccc-C
Q 002263 594 SVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT-S 666 (946)
Q Consensus 594 ~v~~~~-~-g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl~-~ 666 (946)
.++.++ + ..+|+++|+++++ ++++.+++++| |.+|.+- +.+++|.++|+++|+++++|.++..- ..+-. .
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~~~---~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 223 (409)
T PLN00143 147 HFDLLPEKGWEVDLDAVEAIAD---ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFV 223 (409)
T ss_pred EEeccCCCCCcCCHHHHHHhcc---cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCc
Confidence 999853 3 4689999999886 67889999999 5799985 24889999999999999999986421 11110 1
Q ss_pred C-CccCC--C-EEEeCCCcccccCCCCCCCcceeEEEe-c-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 667 P-GYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVK-K-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 667 p-g~~Ga--D-i~~~s~hK~f~~P~g~GGPg~G~i~~~-~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
| ..+.. . +++.++.|+|+.| |.++|++.+. + .+.+.+. ...... ..... +.+++ ...
T Consensus 224 ~~~~~~~~~~vi~~~SfSK~f~~p----GlRvG~~v~~~p~~~~~~~~--~~~~~~------~~~~~-~~~~~----~~~ 286 (409)
T PLN00143 224 PMGLFASIVPVITLGSISKRWMIP----GWGLGWLVTCDPSGLLQICE--IADSIK------KALNP-APFPP----TFI 286 (409)
T ss_pred chhhhcccCcEEEEccchhhcCCC----ccceEEEEeeCchhhhhhHH--HHHHHH------HHHhc-cCCCC----chH
Confidence 1 11211 1 5567788887654 7899999884 2 3322110 000000 00000 11111 111
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCC-CHHHHHHHH-HH
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL-MD 817 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~-~~~~i~~~L-~~ 817 (946)
..++..+|.....+-+++..+....+.+++.+.|++. .......+++..+ ++++++.... .+. +..++..+| .+
T Consensus 287 q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f--~w~~l~~~~~-~~~~~~~~~~~~ll~~ 363 (409)
T PLN00143 287 QAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFF--ALVKLNLLLL-EDIEDDMEFCLKLAKE 363 (409)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEE--EEEecchhhc-CCCCCHHHHHHHHHHh
Confidence 1111222221112234455555556667777788764 1111111222222 4566642100 022 455666555 68
Q ss_pred CCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 818 ~Gi~~-~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+|+.+ +...|...+++||+++ .+.+++++.++.|+++++.
T Consensus 364 ~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 364 ESLIILPGVTVGLKNWLRITFA--VEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred CCEEEeCccccCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHH
Confidence 89975 3333444689999997 3577888888888777654
No 422
>PRK08363 alanine aminotransferase; Validated
Probab=99.53 E-value=1.3e-12 Score=150.93 Aligned_cols=306 Identities=14% Similarity=0.085 Sum_probs=177.3
Q ss_pred ccHHHHHHHHHHHHHHhhCC--CcccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|. +...+..++| ++|.. ++++.+. .+++.|+++...|..+...++..|.++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 141 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQ---LIFGALL-----DPGDEILIPGPSYPPYTGLVKFYGGVP 141 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCEE
Confidence 56555555555555444453 3334444444 44443 3333321 256889999998888877888999999
Q ss_pred EEE-cCCCC-CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc-cc
Q 002263 593 VSV-GTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 665 (946)
Q Consensus 593 v~v-~~~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g-l~ 665 (946)
+.+ +.+++ +.+|+++|+++++ +++++|++++| |.+|.+- .++++|+++|+++|+++++|+++..- +.+ ..
T Consensus 142 v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~ 218 (398)
T PRK08363 142 VEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHV 218 (398)
T ss_pred EEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCccc
Confidence 888 55554 4689999999986 68899999999 4789875 24999999999999999999986311 111 00
Q ss_pred CCCcc-CCC--EEEeCCCcccccCCCCCCCcceeEEE--ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 666 SPGYI-GAD--VCHLNLHKTFCIPHGGGGPGMGPIGV--KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 666 ~pg~~-GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~--~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
....+ +.+ +++.+++|+|+. .|.++|++.+ ++++.+.+-... .. ......+.+...+
T Consensus 219 ~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~~~~~~~~~~~~~l~~~~-~~----------~~~~~~~~s~~~q--- 280 (398)
T PRK08363 219 SPGSLTKDVPVIVMNGLSKVYFA----TGWRLGYIYFVDPEGKLAEVREAI-DK----------LARIRLCPNTPAQ--- 280 (398)
T ss_pred CHHHcCcCCcEEEEecchhccCC----ccceEEEEEEeCcHHHHHHHHHHH-HH----------HhcccccCChHHH---
Confidence 11111 122 445678898764 4788999987 444332211000 00 0000111111111
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHH-HHHHHCC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMDYG 819 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~-~~L~~~G 819 (946)
.++..++.. ..+-+++..++...+.+++.+.|+++..+.+..+.+.++ +++.++.. ...+..+++ +.|.++|
T Consensus 281 -~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~--~~~~l~~~---~~~~~~~~~~~~l~~~g 353 (398)
T PRK08363 281 -FAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFY--IFPRIEEG---PWKDDKEFVLDVLHEAH 353 (398)
T ss_pred -HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEE--EEEEeccC---CCCCHHHHHHHHHHhCC
Confidence 112222221 234455666666677888888887642222222223221 22344310 012344554 5567899
Q ss_pred ccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 820 FHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 820 i~~-~~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+ +...|. ..+++||++. .+.+++++.++.|++++++
T Consensus 354 V~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 354 VLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 985 333343 2478999985 4678888888888876554
No 423
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.53 E-value=3.5e-13 Score=154.62 Aligned_cols=259 Identities=20% Similarity=0.216 Sum_probs=166.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+ +..++|.++..++++++. +++++||++...|+.... .+...|++++.++.
T Consensus 63 ~~~le~~la~l~g~~~~-v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEGAEAC-VATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 56788999999998764 455677766644443331 246789998887765543 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|.++.. ..+..|..+|+|+++
T Consensus 134 ~-----d~~~l~~~i~---~~tklV~ie~p~NptG~v~-dl~~I~~la~~~gi~livD~t~~~--~~~~~pl~~g~Divv 202 (390)
T PRK08133 134 T-----DLDAWRAAVR---PNTKLFFLETPSNPLTELA-DIAALAEIAHAAGALLVVDNCFCT--PALQQPLKLGADVVI 202 (390)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhhCCcEEE
Confidence 3 7999999996 78999999999 5799998 899999999999999999987532 233466678999999
Q ss_pred eCCCcccccCCCCCCCcc-eeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~-G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|+||+|+. .|..+ |+++.++++...+.... + ..+. +.+ . ..+|.. ..|-+-
T Consensus 203 ~S~sK~~~g----~g~~~GG~vv~~~~~~~~~~~~~-----------~--~~g~-~~~----~---~~a~~~--l~gl~t 255 (390)
T PRK08133 203 HSATKYLDG----QGRVLGGAVVGSKELMEEVFGFL-----------R--TAGP-TLS----P---FNAWVF--LKGLET 255 (390)
T ss_pred eecceeecC----CcceEeEEEEcCHHHHHHHHHHH-----------H--HhCC-CCC----H---HHHHHH--Hcccch
Confidence 999999852 22333 66766655432221000 0 0011 111 1 123333 334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 002263 756 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 835 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri 835 (946)
+..+.++...++.++++.|++...+.. + ..+.+. .....+++++.+ .|+ ++-+-|
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~p~v~~-----------v-~yp~l~---~~p~~~~~~~~~-~g~---------g~~~s~ 310 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAHPGVER-----------V-FYPGLP---SHPQHELAKRQQ-KGG---------GAIVSF 310 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeE-----------E-ECCCCC---CCccHHHHHHhC-CCC---------ceEEEE
Confidence 666777777899999999987633310 1 111111 112356666643 221 233444
Q ss_pred EcCCCCCHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALI 854 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~ 854 (946)
.+ ..+.++..+|++.|+
T Consensus 311 ~l--~~~~~~~~~f~~~l~ 327 (390)
T PRK08133 311 EV--KGGREAAWRVIDATR 327 (390)
T ss_pred EE--cCCHHHHHHHHHhCC
Confidence 43 335777888888886
No 424
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.53 E-value=2.7e-12 Score=148.98 Aligned_cols=284 Identities=16% Similarity=0.161 Sum_probs=176.8
Q ss_pred HHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHHHHHhcCC-------------------CC--CCEEE-EcCCCCC
Q 002263 524 NLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-------------------HH--RNVCI-IPVSAHG 579 (946)
Q Consensus 524 el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~-------------------~~--~~~Il-i~~saHg 579 (946)
.+.+.+++++. ++. .++.++||.++++++..+|.|+..+|. ++ +.+|| ...++||
T Consensus 109 ~l~~~l~~~~p~~~~~-v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG 187 (464)
T TIGR00699 109 ILKEGILKVAPKGQDQ-VWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHG 187 (464)
T ss_pred HHHHhHHhhCCCCcCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCC
Confidence 33333455653 333 367799999999999988888643321 01 23566 5688999
Q ss_pred CCHHHHHHcCCE-----------EEEEcCCCC--------------CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccc
Q 002263 580 TNPATAAMCGMK-----------IVSVGTDAK--------------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVY 633 (946)
Q Consensus 580 ~~~~~a~~~G~~-----------vv~v~~~~~--------------g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~ 633 (946)
....+....|-. +..+|.... ..-++++++++++++.+++++|+++.- +..|++
T Consensus 188 ~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~ 267 (464)
T TIGR00699 188 RLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDN 267 (464)
T ss_pred ccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCc
Confidence 998876554421 222332210 012467788889866678999988754 345776
Q ss_pred cc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc------C----CCEEEeCCCcccccCCCCCCCcceeEEEe
Q 002263 634 EE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G----ADVCHLNLHKTFCIPHGGGGPGMGPIGVK 700 (946)
Q Consensus 634 ~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G----aDi~~~s~hK~f~~P~g~GGPg~G~i~~~ 700 (946)
.+ .+++|.++|++||+++|+|.++ .|+.+.|.+ | +|++++ .|.++ +|| ++..+
T Consensus 268 ~~~~~yl~~lr~lc~~~g~lLI~DEV~----tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg----~gG----~~~~~ 333 (464)
T TIGR00699 268 HASPDFFRKLRDITKKHNVAFIVDEVQ----TGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQ----TAG----YFFHD 333 (464)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeeee----eCCCCCcchhHHHhcCCCCCCCEEEe--hhhhc----cCC----ccccc
Confidence 52 3999999999999999999864 556555532 3 799877 48773 222 22222
Q ss_pred cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---
Q 002263 701 KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--- 777 (946)
Q Consensus 701 ~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--- 777 (946)
+.+...-+. ...+.+.|+...++++.+.|..+-++++.+.+ ....++|.++|++.
T Consensus 334 ~~~~~~~~~-------------------~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~---~~~g~~l~~~L~~l~~~ 391 (464)
T TIGR00699 334 PAFRPNKPY-------------------RQFNTWMGDPSRALILREIIQEIKRKDLLENV---AHVGDYLYTGLEDLQKK 391 (464)
T ss_pred hhccCCCCc-------------------ccccCCCCCHHHHHHHHHHHHHHHhcCHHHHH---HHHHHHHHHHHHHHHHh
Confidence 211100000 01112445677777788888888776655433 35567888888764
Q ss_pred CC-ee--ec--cCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHH
Q 002263 778 YP-IL--FR--GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDA 852 (946)
Q Consensus 778 ~~-v~--~~--~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~a 852 (946)
+. ++ .. | .+.. +-+.++. ......+.+.+.++|+.+.... .+.||+.|+..+|++|||.++++
T Consensus 392 ~~~~i~~vRg~G-~Glm---~gie~~~-----~~~~~~i~~~~~~~Gvl~~~~g---~~~ir~~Ppl~it~~eid~~~~~ 459 (464)
T TIGR00699 392 YPEFIQNLRGKG-RGTF---IAWDTPD-----EAKRDKLLKKARNNGVNIGGCG---VKAIRLRPMLVFQKHHADIFLEI 459 (464)
T ss_pred CCCceeeecccC-eEEE---EEEecCC-----HHHHHHHHHHHHHCCcEEecCC---CCeEEEeCCCCCCHHHHHHHHHH
Confidence 33 21 11 2 1221 2233321 1125678899999999975432 37899999999999999999999
Q ss_pred HHHH
Q 002263 853 LISI 856 (946)
Q Consensus 853 L~~i 856 (946)
|.++
T Consensus 460 l~~~ 463 (464)
T TIGR00699 460 ISKI 463 (464)
T ss_pred HHHh
Confidence 9875
No 425
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.53 E-value=1.5e-12 Score=148.20 Aligned_cols=271 Identities=16% Similarity=0.095 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccccc
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID 180 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~ 180 (946)
..++++.++++.|.+. +..+.+||+|+.++++++ +. +||+||++...+..+...+...+..+|++++++|+++.+
T Consensus 66 ~~~lE~~la~leg~~~--av~~sSG~aAi~~al~al-l~--~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 66 VQAFEEKYAVLENAEH--ALSFSSGMGAITSAILSL-IK--KGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 4567789999999875 778999999988887776 33 899999998877766666555566789999999987544
Q ss_pred c--cCC-CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 181 Y--KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 181 ~--i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
. +++ ++++|++..| |.++.+.|+++|+++||++| ++|+ +.++.+....|-++|+|++++|+ |.++++-.
T Consensus 141 ~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD-~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d--- 214 (384)
T PRK06434 141 SLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVD-ATFASPYNQNPLDLGADVVIHSATKYISGHSD--- 214 (384)
T ss_pred heeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEE-CCCCCcccCCchhcCCCEEEeecccccCCCCC---
Confidence 3 555 6999999988 67899999999999999998 4564 33444545567789999999999 77754321
Q ss_pred CceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
=-+|.+.+++ ++.+++- ..|+..|.. . ++ ..|+ +...|-+-++.+
T Consensus 215 ~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~~-~---~~---~~A~--l~~~gL~tL~~R 260 (384)
T PRK06434 215 VVMGVAGTNNKSIFNNLV-------------------------ERRKTLGSN-P---DP---IQAY--LALRGLKTLGLR 260 (384)
T ss_pred ceEEEEecCcHHHHHHHH-------------------------HHHHhcCCC-C---CH---HHHH--HHHhCCCcHHHH
Confidence 0146666643 3322220 000111100 0 11 1222 244555566777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcCC----------CCcCeEEEecCC---HHHHHHHHHH--cCCeee--------e-
Q 002263 335 AQRVHGLAGTFALGLKKLGTVE-VQGL----------PFFDTVKVKCAD---AHAIASAAYK--IEMNLR--------V- 389 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g~~~-~~~~----------~~~~~~~i~~~~---~~~v~~~L~~--~GI~~~--------~- 389 (946)
.++..+++..+++.|++.+.++ |..+ .+...++|.+++ +.++.++|.= .+..+. +
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~ 340 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPV 340 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccCCCCCCeeeECCC
Confidence 7888899999999999875343 3211 112346776654 3444444431 122110 0
Q ss_pred ----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 ----------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ----------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++.-+.++=|++|.++|.
T Consensus 341 ~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~ 383 (384)
T PRK06434 341 ETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALS 383 (384)
T ss_pred ccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhc
Confidence 124678999887765555566666653
No 426
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.53 E-value=5.1e-12 Score=146.75 Aligned_cols=325 Identities=17% Similarity=0.167 Sum_probs=193.6
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r 557 (946)
..+|++.+.+..++..+... ..+..+ ++.+ .+...++.+.|++++... ...++.++|+.++++++...|
T Consensus 45 ~~lGh~~p~v~~a~~~ql~~-~~~~~~-~~~~-------~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr 115 (420)
T TIGR00700 45 LNIGHSHPRVVDAVRTQVAE-FTHTCF-MVTP-------YEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIAR 115 (420)
T ss_pred ccCCCCCHHHHHHHHHHHHh-ccCccc-cccC-------ChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 35677776666555555221 111111 0011 122446778888887422 234667899999988888888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCCCCC-----------CCHHHHHHHH
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKGN-----------INIEELRKAA 612 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~~g~-----------~D~e~L~~~i 612 (946)
.|. +|.+|+ ...++||....+..+.|- .+..++.....+ -+++.+++.+
T Consensus 116 ~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
T TIGR00700 116 SYT------GRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIF 189 (420)
T ss_pred Hhc------CCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHH
Confidence 762 344555 678899998877654331 133344321100 1256777776
Q ss_pred H--hcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCc------c--CCCEEEeC
Q 002263 613 E--ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLN 678 (946)
Q Consensus 613 ~--~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~------~--GaDi~~~s 678 (946)
. .+.+++++|+++.- ...|++.+ .+++|.++|++||+++++|.++ .|+.+.|. + -+|++++
T Consensus 190 ~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~----tg~gr~g~~~a~~~~~~~pDi~~l- 264 (420)
T TIGR00700 190 VIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ----TGFARTGAMFACEHEGPEPDLITT- 264 (420)
T ss_pred HhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc----cCCcccchhHHHhhcCCCCCEEEe-
Confidence 3 23578888888643 34576542 3999999999999999999874 34433331 2 3788775
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
.|.++ ||..+|++++++++.+.+.... ..++ +.++.+.++++.+.|..+..+++.+
T Consensus 265 -sK~l~-----~G~pig~v~~~~~i~~~~~~~~--------------~~~T----~~~~pl~~aaa~a~l~~l~~~~~~~ 320 (420)
T TIGR00700 265 -AKSLA-----DGLPLSGVTGRAEIMDAPAPGG--------------LGGT----YAGNPLACAAALAVLAIIESEGLIE 320 (420)
T ss_pred -ecccc-----CCcceEEEEecHHHHhhcCCCC--------------cCCC----CCcCHHHHHHHHHHHHHHHhccHHH
Confidence 58874 4578999999988766542110 0111 2234555666777787777666655
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeeEEEeccccc-c-cCCCCHHHHHHHHHHCCcccCC-CCCCCC
Q 002263 759 ASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLK-N-TAGIEPEDVAKRLMDYGFHGPT-MSWPVP 830 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~~~-~-~~g~~~~~i~~~L~~~Gi~~~~-~~~p~~ 830 (946)
..+ ...++++++|++. +.. ...+. |.+ +.+.+..-. . ........+.+.+.++|+.+.. ..| .
T Consensus 321 ~~~---~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~---~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~ 391 (420)
T TIGR00700 321 RAR---QIGRLVTDRLTTLKAVDPRIGDVRGL-GAM---IAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--G 391 (420)
T ss_pred HHH---HHHHHHHHHHHHHHhhCCCEEEeecc-ceE---EEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--C
Confidence 443 4455677776653 221 12232 332 233321100 0 0011235677777899998632 223 3
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 831 GTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 831 ~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+++|++|....++++|++.++.|.+++
T Consensus 392 ~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 392 NIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 789999988889999999999998875
No 427
>PRK08175 aminotransferase; Validated
Probab=99.53 E-value=3.2e-12 Score=147.48 Aligned_cols=305 Identities=12% Similarity=0.129 Sum_probs=181.0
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc-cccCCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa~-ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
.+|..++...+.+++.+..|.+ .. ++..++|++ |.. ++++.+. .++++|+++...|+.+...+...|+
T Consensus 66 ~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 137 (395)
T PRK08175 66 SRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA---HLMLATL-----DHGDTVLVPNPSYPIHIYGAVIAGA 137 (395)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 4677777777777777666654 23 455555554 332 2233321 2468899999988888788889999
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccc-ccccC
Q 002263 591 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 666 (946)
Q Consensus 591 ~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~~ 666 (946)
+++.++.++++ .++++++++++.+.+++++|++++| |.+|.+-+ .+++|+++|+++|+++++|.++..-. .+...
T Consensus 138 ~~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~ 216 (395)
T PRK08175 138 QVRSVPLVEGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKA 216 (395)
T ss_pred eEEEEecccCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCC
Confidence 99999987654 3589999988754457899999988 57898751 35899999999999999999863211 11111
Q ss_pred C--Cc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 667 P--GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 667 p--g~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
+ .. .+..+++.++.|+|+.| |-++|+++.++++.+.+-.. ......+++ ...
T Consensus 217 ~~~~~~~~~~~~~i~~~S~SK~~g~p----GlRiG~~~~~~~l~~~~~~~--------------~~~~~~~~~----~~~ 274 (395)
T PRK08175 217 PSIMQVPGAKDVAVEFFTLSKSYNMA----GWRIGFMVGNPELVSALARI--------------KSYHDYGTF----TPL 274 (395)
T ss_pred cchhcCCCcccCEEEEeeccccccCc----chhheeeeCCHHHHHHHHHH--------------HhhcccCCC----cHH
Confidence 1 11 12235567888988543 56789998877665543210 000111111 111
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
..++...+. ...+-+++..+...++.+++.+.|++. .+.+..+.+.. -+.++++... ...+..+++.+|. ++|
T Consensus 275 q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~--~i~i~l~~~~--~~~~~~~~~~~l~~~~g 348 (395)
T PRK08175 275 QVAAIAALE-GDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASM--YVWAKIPEPY--AAMGSLEFAKKLLNEAK 348 (395)
T ss_pred HHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEE--EEEEECCccc--CCCCHHHHHHHHHHhCC
Confidence 111122221 123334555555567778888888875 22221222222 2456654210 0135688988776 679
Q ss_pred cccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 820 FHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 820 i~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+.+.. ..|+ ..+++||++. .+.+++...++.|.++++
T Consensus 349 v~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 349 VCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred EEEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 87543 2232 2468999985 355666666555555543
No 428
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.53 E-value=3.1e-12 Score=147.99 Aligned_cols=307 Identities=11% Similarity=0.142 Sum_probs=186.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+.+|.+ .. .+..++|++. +..++++.+. .+++.|+++++.++.+...+.+.|++
T Consensus 70 ~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 142 (403)
T PRK08636 70 SKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE--GYVHLVQAIT-----NPGDVAIVPDPAYPIHSQAFILAGGN 142 (403)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 4787777777888887777754 33 3555566542 2333444432 25689999999888787789999999
Q ss_pred EEEEcCC--CCCCCCHHHH----HHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-c
Q 002263 592 IVSVGTD--AKGNINIEEL----RKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-Q 661 (946)
Q Consensus 592 vv~v~~~--~~g~~D~e~L----~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~ 661 (946)
++.++.+ ++..+|++++ +++++++..+++++++++| |.+|.+- +.+++|.++|++|++++++|.++..- .
T Consensus 143 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~ 222 (403)
T PRK08636 143 VHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITF 222 (403)
T ss_pred EEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhcc
Confidence 9999885 3357888754 5556544568999999998 5788875 25899999999999999999976311 1
Q ss_pred ccccCC--Ccc--CCC--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCcc
Q 002263 662 VGLTSP--GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 662 ~gl~~p--g~~--GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~ 735 (946)
.+...+ ..+ ..| +.+.++.|+|+.| |.++|++..++++...+.... .....+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~iv~~~~li~~~~~~~--------------~~~~~~~~~- 283 (403)
T PRK08636 223 DGYKTPSILEVEGAKDVAVESYTLSKSYNMA----GWRVGFVVGNKKLVGALKKIK--------------SWLDYGMFT- 283 (403)
T ss_pred CCCCCCChhcCCCccccEEEEEecccccCCc----cceeeeeeCCHHHHHHHHHHH--------------HHhcccCCh-
Confidence 121111 111 123 3356788988544 789999988776654432100 000111110
Q ss_pred chhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHH
Q 002263 736 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
....+.+ ..+. ...+-+++..+....+.+++.+.|++. +.+. .+.+..+ ++++++... .+.+..++++.
T Consensus 284 --~~q~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~g~~--~~~~l~~~~--~~~~~~~l~~~ 353 (403)
T PRK08636 284 --PIQVAAT-IALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQ--KPRASMF--VWAKIPEPA--RHLGSLEFSKQ 353 (403)
T ss_pred --HHHHHHH-HHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCcceE--EEEECCCcc--CCCCHHHHHHH
Confidence 1111111 1221 123334555555667778888888774 3321 2222222 456664210 12356788877
Q ss_pred HH-HCCccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 815 LM-DYGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 815 L~-~~Gi~~-~~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
|. ++|+.+ +...|. ..+++||++. .+.+++++.++.|+++++.
T Consensus 354 ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 354 LLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred HHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 55 689875 333343 2478999996 4567777777777666543
No 429
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.53 E-value=2.4e-12 Score=141.58 Aligned_cols=354 Identities=16% Similarity=0.195 Sum_probs=223.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCcce--eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNKVYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 104 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~~~~--~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~ 104 (946)
..|| ..+++..++++.+......+-.+. --.|..|.. -|.... -+. +-|.-|+|..+.+..+..+.-.+.
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~--~~~~~~-l~~---~~~~k~N~l~~d~fp~~~~~e~~~ 125 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG--EPELDK-LIM---EAYNKFNPLHPDEFPVVRKLEAEC 125 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC--Ccchhh-HHH---HHHhhcCccCccccchhHHHHHHH
Confidence 4678 689999999999988765443322 122334333 222221 111 113334777888888888888999
Q ss_pred HHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHhccccC-----CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-
Q 002263 105 QTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKG-----KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 177 (946)
Q Consensus 105 q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~~~~~~-----~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~- 177 (946)
-.|+|.|++.+.+ ....+.|+|.++.++..+.+..++ ....++++.++|.+ |+.+++.++++++.++++
T Consensus 126 Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a----~eK~a~yf~v~l~~V~~~~ 201 (491)
T KOG1383|consen 126 VNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA----FEKAARYFEVELREVPLDE 201 (491)
T ss_pred HHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH----HHHHHhhEEEEEEeeeccc
Confidence 9999999999754 334566777443333222221111 23345565555544 445566789999998875
Q ss_pred -----cc---cc-cCCCEeEEEEEcCC-CceeecchHHHHHHHHh-CCcEEEEEecCccccC---CCCCCCccc-----e
Q 002263 178 -----DI---DY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTI---LKPPGELGA-----D 238 (946)
Q Consensus 178 -----~l---~~-i~~~t~~v~v~~pn-~~G~i~di~~i~~~a~~-~gal~~v~a~~~al~~---l~~~~~~Ga-----D 238 (946)
|+ .+ ++++|++|+...|| .+|.++|+++|.++.-+ ++..++|++.+-++-. .....+||+ -
T Consensus 202 ~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred cceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 22 23 78999999999996 49999999999999999 9999999653322221 112234443 2
Q ss_pred EEEeccccccccCCCCCCceE-EEEEchhhhhcCCCceEeEeecCCCC--cceEEecccccccccccccCCCccchHHHH
Q 002263 239 IVVGSAQRFGVPMGYGGPHAA-FLATSQEYKRMMPGRIVGVSIDSSGK--PALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 239 i~v~s~k~lg~P~~~GGP~~g-~l~~~~~~~~~lp~~~~G~s~d~~g~--~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
-.-.++|++|.-+ +|.+ .++-.++++ +-.++- ..|..|. ..+.++.+ ++.+++ .
T Consensus 282 Sisa~~HKYGl~~----~G~~~vl~r~k~~~---~~q~~~-~~~w~Gg~y~s~TlngS---------R~g~~v------a 338 (491)
T KOG1383|consen 282 SISADGHKYGLAP----AGSSWVLYRNKELL---PHQLFF-HTDWLGGIYASPTLNGS---------RPGSQV------A 338 (491)
T ss_pred eEeeccceeeeee----cCcEEEEEcccccc---cceEEE-eccccCccccCcccccC---------CcccHH------H
Confidence 2333457776522 2343 444444432 222221 1121121 12333321 222222 1
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeee-cC
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV-DS 392 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~-~~ 392 (946)
+.-++ +..+|.+|+.+..+++.+.+++|+++|++++++.+++.|...-+.+.... -.++.+.|+++||++..+ .+
T Consensus 339 ~~wa~--~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P 416 (491)
T KOG1383|consen 339 AQWAA--LMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFP 416 (491)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCC
Confidence 22233 37899999999999999999999999999955999877543223333332 679999999999999876 46
Q ss_pred CeEEEEeccCCCHHHH-HHHHHHHhC
Q 002263 393 NTVTASFDETTTLEDV-DKLFIVFAG 417 (946)
Q Consensus 393 ~~lris~~~~~t~edi-d~ll~~l~~ 417 (946)
..+.++++-.++.+++ ++|+..++.
T Consensus 417 ~a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 417 AAIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred CceEEEEEeeeccHHHHHHHHHHHHH
Confidence 7999999999888885 777777764
No 430
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.53 E-value=3.6e-12 Score=142.02 Aligned_cols=303 Identities=17% Similarity=0.153 Sum_probs=186.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH---HHHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~---a~~~G~~vv~v~~~ 598 (946)
..++++++++.+|...+ +.+++|+.+.. +++++ -|.+++|+||+|.- ++.++ ..+.|++++.|.+|
T Consensus 36 v~~FE~~~ae~~G~k~a-va~~sgT~AL~---laL~a----l~ig~GDeVI~ps~---TfvATan~i~~~Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLGVKYA-VAVSSGTAALH---LALLA----LAIGPGDEVIVPSF---TFVATANAVLLVGAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhCCCeE-EEecChHHHHH---HHHHh----cCCCCCCEEEecCC---chHHHHHHHHHcCCeEEEEecC
Confidence 45788999999999875 44566765543 33432 12457899999987 55555 55799999999999
Q ss_pred CC-CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccCCCEEE
Q 002263 599 AK-GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCH 676 (946)
Q Consensus 599 ~~-g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~GaDi~~ 676 (946)
++ +.+|++.++++|+ ++|++|+.. ..+|..- |+++|.++|++||++|+-|+||..+..-- ...|.+| |+.+
T Consensus 105 ~~T~nid~~~ie~aIt---~~tKAIipV--hl~G~~~-dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G-d~~~ 177 (374)
T COG0399 105 PDTLNIDPDLIEAAIT---PRTKAIIPV--HLAGQPC-DMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG-DIGA 177 (374)
T ss_pred CcccCCCHHHHHHHcc---cCCeEEEEe--hhccCCC-CHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc-ceEE
Confidence 76 8999999999998 789999875 5678877 89999999999999999999975322111 2335554 7777
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+|+|-+=.+. .| -.|.+.+++ ++.+++.- +..|...+.. + .+....+..+..=.-..++..+.-|.
T Consensus 178 fSF~~~K~it--tg--EGGav~tnd~ela~k~~~lr~hG~~~~~~-~--~y~~~~~G~N~rm~~iqAAigl~QL~----- 245 (374)
T COG0399 178 FSFHATKNLT--TG--EGGAVVTNDEELAEKARSLRNHGLSRDAV-F--KYLHEELGYNYRLTEIQAAIGLAQLE----- 245 (374)
T ss_pred EEecCCCCcc--cc--CceEEEeCCHHHHHHHHHHHHhCcCCCcc-c--cceeeecccccCHHHHHHHHHHHHHH-----
Confidence 7765432222 22 346787775 44433210 0112111000 0 00000010000001112222233332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCccc----CCC--
Q 002263 755 GLTEASKIAILNANYMAKRLEKH--YPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG----PTM-- 825 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~----~~~-- 825 (946)
.+.+..++...++++..+.|++. +.+....... ...|.+.+.++. .+.+-+.+.+.|.++|+-. ..+
T Consensus 246 ~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~----~~~~R~~l~~~L~~~gi~~~~~~~P~~~ 321 (374)
T COG0399 246 RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE----EGISRDALMESLKEAGVGAVVYFRPLHL 321 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC----CCCCHHHHHHHHHhCCCCceEEeecccc
Confidence 33444455557788888888875 2332222111 345666666542 1467789999999997642 111
Q ss_pred -------------CCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 826 -------------SWPV-----PGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 826 -------------~~p~-----~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.+|. ...|.+-.....+.+|+++.+++|++++.
T Consensus 322 ~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 322 QPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred chhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 1221 24567766677899999999999998864
No 431
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.53 E-value=5.9e-13 Score=152.45 Aligned_cols=210 Identities=18% Similarity=0.213 Sum_probs=144.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+ +..++|+.+..++++++. . ++++|+++...|+.... .+...|++++.++.
T Consensus 56 ~~~le~~la~l~g~~~~-~~~~sG~~Ai~~al~al~----~----~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 56 VAAFEERIAALEGAERA-VATATGMSAIQAALMTLL----Q----AGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh----C----CCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 45788999999998754 456777766655544331 2 45789998887875433 35678999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++... .+..|.++|+|+++
T Consensus 127 ~-----d~~~l~~~i~---~~tklV~le~p~np~g~~~-dl~~I~~la~~~gi~livD~a~~~~--~~~~pl~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK---PNTKLVFVETPSNPLGELV-DIAALAELAHAIGALLVVDNVFATP--VLQQPLKLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 3 7899999886 789999999994 689988 8999999999999999999986422 23456678999999
Q ss_pred eCCCcccccCCCCCCCc-ceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPG-MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg-~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|++|+|+. .|-. .|++..++++.+.+.... + ..+... +.. .+|. ...|.+-
T Consensus 196 ~S~sK~l~g----~g~~~gG~vv~~~~~~~~l~~~~-----------~--~~g~~~-----~p~---~a~~--~l~~l~t 248 (380)
T TIGR01325 196 YSATKHIDG----QGRVMGGVIAGSEELMAEVAVYL-----------R--HTGPAM-----SPF---NAWV--LLKGLET 248 (380)
T ss_pred eeccceecC----CCCeEEEEEEeCHHHHHHHHHHH-----------H--hhCCCC-----CHH---HHHH--HHhccCc
Confidence 999999852 1222 367777765443321000 0 011110 111 1232 3334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC
Q 002263 756 LTEASKIAILNANYMAKRLEKHY 778 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~ 778 (946)
+..+.++..+++.++++.|+++.
T Consensus 249 l~~r~~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 249 LSLRMQKQFDSALAIAEWLQAQP 271 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 66667777889999999998753
No 432
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.53 E-value=5.5e-12 Score=145.94 Aligned_cols=261 Identities=13% Similarity=0.136 Sum_probs=155.1
Q ss_pred CCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHH
Q 002263 567 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEIC 641 (946)
Q Consensus 567 ~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~ 641 (946)
++++|+++...+..+...+...|++++.++.++ ++.+|+++++++++ ++++++++++| |.+|.+- +++++|.
T Consensus 119 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~ 195 (403)
T TIGR01265 119 PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD---EKTVAIVVINPSNPCGSVFSRDHLQKIA 195 (403)
T ss_pred CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC---cCccEEEEecCCCCCCCCCCHHHHHHHH
Confidence 467899998877666667888999999998754 46799999999986 67889999999 5789885 1489999
Q ss_pred HHHHHcCCEEEEeccccccc-cc--ccCCCccC--CC-EEEeCCCcccccCCCCCCCcceeEEEec--cc-----CCCCC
Q 002263 642 KIIHDNGGQVYMDGANMNAQ-VG--LTSPGYIG--AD-VCHLNLHKTFCIPHGGGGPGMGPIGVKK--HL-----APFLP 708 (946)
Q Consensus 642 ~ia~~~g~ll~vD~a~~~a~-~g--l~~pg~~G--aD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~--~l-----~~~lp 708 (946)
++|+++|+++++|+++..-. .+ +.....+. .. |++.|+.|+|+.| |-++|++.+.. .+ ...+.
T Consensus 196 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~~ 271 (403)
T TIGR01265 196 EVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVP----GWRLGWIIIHDPHGIFRDTVLQGLK 271 (403)
T ss_pred HHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCC----cceEEEEEEeCchhhhHHHHHHHHH
Confidence 99999999999999863211 11 00111111 12 4556788887654 67899998742 21 11110
Q ss_pred CCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh-HHHHHHHHHHHHHHHHHHHhccCCeeeccCCC
Q 002263 709 SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG-LTEASKIAILNANYMAKRLEKHYPILFRGVNG 787 (946)
Q Consensus 709 ~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG-l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~ 787 (946)
. ......+.+...+. ++..++.. +.+. +++..++...+.+++.+.|++...+.+..+.+
T Consensus 272 ~---------------~~~~~~~~~~~~q~----~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~ 331 (403)
T TIGR01265 272 N---------------LLQRILGPATIVQG----ALPDILEN-TPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEG 331 (403)
T ss_pred H---------------HhhhhcCCChHHHH----HHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCc
Confidence 0 00000111111111 11222322 2233 44455566677788888887642222212222
Q ss_pred ceeeeEEEecccccccCCCCHHHHHHHHH-HCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 788 TVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 788 ~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~-~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
..+ +.++++.-......+..+++++|. ++|+.+. ...|...+++||++.. .++.+++.++.|.++++
T Consensus 332 g~f--~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 332 AMY--LMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV--PESMLEEACSRIKEFCE 400 (403)
T ss_pred eeE--EEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 222 445554100000125678888864 7898753 2233346899999973 46666666666665543
No 433
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.53 E-value=5.2e-12 Score=147.88 Aligned_cols=332 Identities=16% Similarity=0.176 Sum_probs=195.8
Q ss_pred ccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHH
Q 002263 480 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 557 (946)
Q Consensus 480 ~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r 557 (946)
..+|++.+.+..++..+. ....+...+.+ ..+...++.+.|+++++.. ...++.++|+.++++++..+|
T Consensus 66 ~~lGh~~p~v~~ai~~q~-~~~~~~~~~~~--------~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr 136 (451)
T PRK06918 66 INVGHSHPKVKEALHKQV-DQYIHTGFNVM--------MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIAR 136 (451)
T ss_pred cCCCCCCHHHHHHHHHHH-HhccCcccccc--------ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 356777766666665552 21111110001 1133557888899988532 234778999999998988888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC-------------EEEEEcCCC-----CCCCC-------HHHHHHH
Q 002263 558 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDA-----KGNIN-------IEELRKA 611 (946)
Q Consensus 558 ~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------------~vv~v~~~~-----~g~~D-------~e~L~~~ 611 (946)
.|. +|.+|| ...++||....+..+.|- .+..+|... .+..+ ++.+++.
T Consensus 137 ~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (451)
T PRK06918 137 KYT------KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNF 210 (451)
T ss_pred HHh------CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHH
Confidence 763 345566 567899998877654331 133344321 11100 2234444
Q ss_pred HHh--cCCCeEEEEEeCCC-ccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCC------ccC--CCEEEe
Q 002263 612 AEA--NRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YIG--ADVCHL 677 (946)
Q Consensus 612 i~~--~~~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg------~~G--aDi~~~ 677 (946)
+.. +.+++++|+++.-. ..|++.+ .+++|.++|++||++++.|.++ .|+.+.| .++ +|++++
T Consensus 211 ~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~----tg~gr~g~~~a~~~~~v~pDi~t~ 286 (451)
T PRK06918 211 FISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ----TGFARTGKYFAIEHFDVVPDLITV 286 (451)
T ss_pred HHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCcCccCceehhHhcCCCCCEEee
Confidence 421 23578888876433 4465442 3899999999999999999874 3333332 234 787765
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 757 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~ 757 (946)
.|.++ +|..+|++++++++.+.+.... ..+.. .|+.+.++++.+.+..+..+++.
T Consensus 287 --sK~l~-----~G~pig~v~~~~~i~~~~~~~~--------------~~~T~----~g~~l~~aaa~a~l~~i~~~~~~ 341 (451)
T PRK06918 287 --SKSLG-----AGVPISGVIGRKEIMDESAPGE--------------LGGTY----AGSPLGCAAALAVLDIIEKENLN 341 (451)
T ss_pred --ehhhc-----CCCccEEEEEcHHHHhccCCCC--------------cCcCC----CcCHHHHHHHHHHHHHHHHCCHH
Confidence 58874 4577999999887765542110 01122 23455566667777777555555
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccc-cccCCCCHHHHHHHHHHCCcccCCC-CCCCC
Q 002263 758 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL-KNTAGIEPEDVAKRLMDYGFHGPTM-SWPVP 830 (946)
Q Consensus 758 ~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~-~~~~g~~~~~i~~~L~~~Gi~~~~~-~~p~~ 830 (946)
+.++ ...+++.++|++. +... ..|. |.. .-+.+..+.. +.........+.+.+.++|+.+... .| .
T Consensus 342 ~~~~---~~g~~l~~~l~~l~~~~~~~~~vrg~-G~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~ 414 (451)
T PRK06918 342 DRAI---ELGKVVMNRFEEMKNKYNCIGDVRGL-GAM-CAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--G 414 (451)
T ss_pred HHHH---HHHHHHHHHHHHHHhhCCCceeeccc-eeE-EEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--C
Confidence 4433 4456777777653 2221 2232 322 1122210100 0000112456788888999986422 12 3
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 831 GTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 831 ~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.+|++|+...|+++||++++.|.++++++.+
T Consensus 415 ~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 415 NVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999888999999999999999988754
No 434
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=2.4e-12 Score=146.84 Aligned_cols=284 Identities=15% Similarity=0.159 Sum_probs=176.4
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC--
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 599 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~-~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-- 599 (946)
.++++.+++.+|++..++..++|++. +..++++.+. . ++ ++|+++...++.+...+++.|.+++.+|.+.
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~~-~----~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDE--AIDLLVRALC-V----PGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHH--HHHHHHHHhc-C----CCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCc
Confidence 47788899999988766666666642 2333344432 1 33 6789988766655556788999999999842
Q ss_pred CC-CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHH--cCCEEEEecccccccccccCC---CccCC
Q 002263 600 KG-NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSP---GYIGA 672 (946)
Q Consensus 600 ~g-~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a~~gl~~p---g~~Ga 672 (946)
+| .+|++++.+++. .+++++|++++| |.+|.+- +.+++.++++. +++++++|.++.. +.....+ .+...
T Consensus 135 ~~~~~d~~~l~~~~~--~~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~~~~~iI~Deay~~-f~~~~~~~~~~~~~~ 210 (364)
T PRK04781 135 DGFHADVPAIVAAAL--ASNAKLVFLCSPSNPAGSAI-ALDQIERALQALQGKALVVVDEAYGE-FSDVPSAVGLLARYD 210 (364)
T ss_pred cCCCcCHHHHHHHHh--ccCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCCCCcEEEEeCcchh-hcCCcchHHHHhhCC
Confidence 33 579999866653 268899999999 4799998 67777777764 4789999998641 1110011 01111
Q ss_pred C-EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 673 D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 673 D-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
. +++.++.|+|+.| |.++|++.+++++.+.+... +...++++ .....+..+|. .
T Consensus 211 ~vi~~~SfSK~~gl~----GlRvGy~v~~~~l~~~l~~~--------------~~~~~~~~------~~~~~a~~~l~-~ 265 (364)
T PRK04781 211 NLAVLRTLSKAHALA----AARIGSLIANAELIAVLRRC--------------QAPYPVPT------PCAALAEQALS-A 265 (364)
T ss_pred CEEEEecChhhcccc----cceeeeeeCCHHHHHHHHhc--------------cCCCCCCH------HHHHHHHHHHh-c
Confidence 2 5566788888644 78999999987766543211 00011111 11111222332 1
Q ss_pred c-HhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC-CC
Q 002263 752 G-SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SW 827 (946)
Q Consensus 752 G-~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~-~~ 827 (946)
+ .+-+.+..+....+.+++.+.|++. +...++ +.+.+ ++++++ +..++.++|.++||.+... .|
T Consensus 266 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~~ 333 (364)
T PRK04781 266 PALAVTARRVAEVRAERERLHAALAQLPGVRRVYP-SQGNF---LLVRFD--------DAEAAFQALLAAGVVVRDQRAA 333 (364)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC-CCCcE---EEEEcC--------CHHHHHHHHHHCCeEEeeCCCC
Confidence 2 1223333444556678888888764 221222 12322 445543 3578899999999987533 23
Q ss_pred C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 828 P-VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 828 p-~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+ ..+++||++. +.++.++|+++|+++.
T Consensus 334 ~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 334 PRLSDALRITLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCCCCeEEEeCC---CHHHHHHHHHHHHHHH
Confidence 3 3578999985 6899999999998764
No 435
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.52 E-value=1.7e-12 Score=150.90 Aligned_cols=290 Identities=14% Similarity=0.211 Sum_probs=177.3
Q ss_pred HHHHHHHHHHhhC---CCcccccCCchHHHHHHHHHHHHHHHH----hcCCCC--CCEEE-EcCCCCCCCHHHHHHcCCE
Q 002263 522 FNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIRAYHK----ARGDHH--RNVCI-IPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 522 ~~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~a~r~y~~----~~G~~~--~~~Il-i~~saHg~~~~~a~~~G~~ 591 (946)
..++.+.|+++++ ++. .++.++|+.++++++..+|.|.. .+|..+ |.+|| ...++||....+....|-+
T Consensus 87 ~~~l~~~l~~~~~~~~~~~-v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~ 165 (431)
T TIGR03251 87 MARFVDTFARVLGDPALPH-LFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTD 165 (431)
T ss_pred HHHHHHHHHHhcCCCCcCE-EEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCc
Confidence 4466677777752 333 36789999999999999998842 234321 45666 5678999988776554421
Q ss_pred -EE----------EE--c-----CCCCC--------CCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc---cCHHHHH
Q 002263 592 -IV----------SV--G-----TDAKG--------NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEIC 641 (946)
Q Consensus 592 -vv----------~v--~-----~~~~g--------~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~---~~i~~I~ 641 (946)
.. .+ | .+.+. .-+++++++.++++.+++++|+++.- +..|++. ..+++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~ 245 (431)
T TIGR03251 166 PRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMR 245 (431)
T ss_pred cccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHH
Confidence 00 01 1 10000 12356677788766689999999854 4567663 2699999
Q ss_pred HHHHHcCCEEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccc
Q 002263 642 KIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 713 (946)
Q Consensus 642 ~ia~~~g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~ 713 (946)
++|++||+++++|+++ .|+.+.|. .-+|++++ .|.+ |..|++..+ ++..... ....
T Consensus 246 ~lc~~~g~llI~DEV~----tG~GrtG~~~a~~~~gv~PDi~~~--gK~~--------~~~g~~~~~-~i~~~~~-~~~~ 309 (431)
T TIGR03251 246 ALCDEHDALLIFDEVQ----TGVGLTGTAWAYQQLGVQPDIVAF--GKKT--------QVCGIMAGR-RVDEVAD-NVFA 309 (431)
T ss_pred HHHHHcCCEEEEecch----hccCccchHHHHHhcCCCCCEEEe--cccC--------ccceEEecc-hHHHhhh-hccc
Confidence 9999999999999874 45655553 24799876 4764 334555433 2211100 0000
Q ss_pred cCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCC
Q 002263 714 STGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNG 787 (946)
Q Consensus 714 ~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~-v~--~~~~~~ 787 (946)
. . +...+.+.|+.+.++++.+.|..+.++++.+.. ....++|.++|++. +. +. ..| .|
T Consensus 310 ~--------~----~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~---~~~g~~l~~~L~~l~~~~~~~i~~vrg-~G 373 (431)
T TIGR03251 310 V--------P----SRLNSTWGGNLVDMVRATRILEIIEEERLVDNA---RVQGAHLLARLHELAAEFPHLVSNPRG-RG 373 (431)
T ss_pred C--------c----cccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHH---HHHHHHHHHHHHHHHHhCccceecccc-cc
Confidence 0 0 001111335666677788888888777664433 35566777777653 22 22 112 12
Q ss_pred ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 788 TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 788 ~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.. +.+.++. ......+.++|.++|+.+.... .+.+|++|+..+|++|||+++++|.+
T Consensus 374 ~~---~~i~~~~-----~~~~~~~~~~l~~~Gvl~~~~g---~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 374 LM---CAFDLPS-----TADRDEVIRQLYREGVLLLGCG---ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ee---EEEEeCC-----HHHHHHHHHHHHhCCeEEecCC---CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 22 2233321 1134578999999999874222 36799999999999999999999875
No 436
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.52 E-value=9.8e-13 Score=150.99 Aligned_cols=290 Identities=14% Similarity=0.114 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 176 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 176 (946)
..++++.+|+++|.+. +..+.+||++...++.++.+. +||+|+++...|+++...++ ..|++++.+|+
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFNSATSALHIACLALGVG--PGDRVWTTPITFVATANCAL----YCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHH----HcCCEEEEEecCCCc
Confidence 3557789999999864 566778898877777666433 89999999999998877653 46888888765
Q ss_pred -----ccccc-cC----CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccc----eEEEe
Q 002263 177 -----KDIDY-KS----GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGA----DIVVG 242 (946)
Q Consensus 177 -----~~l~~-i~----~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~Ga----Di~v~ 242 (946)
+++++ ++ ++|++|++++ .+|...|+++|.++|+++|+++++++ .++++.......+|. |++++
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~--~~G~~~~~~~i~~l~~~~~~~lI~D~-a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD--FAGKSVDMQAIAALAKKHGLKIIEDA-SHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC--CCCccCCHHHHHHHHHHcCCEEEEEC-CCcccCccCCEeCCCccccceEEE
Confidence 23444 66 6889988776 47999999999999999999999943 345553323334455 99999
Q ss_pred cc---ccccccCCCCCCceEEEEE-chhhhhcCCC-ceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHH
Q 002263 243 SA---QRFGVPMGYGGPHAAFLAT-SQEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 317 (946)
Q Consensus 243 s~---k~lg~P~~~GGP~~g~l~~-~~~~~~~lp~-~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~ 317 (946)
|. |+++.+ ..|++.+ ++++.+++.. +..|...+... + ...+ ....+.+.++. ..+..+..+
T Consensus 180 S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~---~-~~~~--~~~~~~~~~~~--g~n~~m~~l 245 (380)
T TIGR03588 180 SFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLL---F-EKQD--EGPWYYEQQEL--GFNYRMTDI 245 (380)
T ss_pred ecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCccc---c-cccc--cCcceeeeecc--ccccCccHH
Confidence 86 455432 2345554 4555544421 11121111000 0 0000 00001111110 000011122
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-------CcCeEEEec-C--CHHHHHHHHHHcCCee
Q 002263 318 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-------FFDTVKVKC-A--DAHAIASAAYKIEMNL 387 (946)
Q Consensus 318 ~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-------~~~~~~i~~-~--~~~~v~~~L~~~GI~~ 387 (946)
.|++-... -+.++++.++-.++++++.+.|++++++.+...+ ..-.+.+.. . ...++.+.|.++||.+
T Consensus 246 ~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~ 323 (380)
T TIGR03588 246 QAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGV 323 (380)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 22221111 1346788888899999999999988545544221 111233332 1 2689999999999965
Q ss_pred eee--------------c-----------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 388 RVV--------------D-----------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 388 ~~~--------------~-----------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.. . ...+++.++...|++|+++++++|+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 324 QVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred ccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 410 0 15588889999999999999999863
No 437
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.52 E-value=2.6e-12 Score=147.95 Aligned_cols=319 Identities=18% Similarity=0.229 Sum_probs=197.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC--
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 599 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-- 599 (946)
+.++++.+++++|.+.+ +.+++|++|+..+++++- .++|+| ++.+...++.....+.|.+++.+++++
T Consensus 55 ~~~Leeaia~~~g~~~v-v~t~~Gt~Al~la~~al~--------~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~ 124 (431)
T cd00617 55 FYDLEDAVQDLFGFKHI-IPTHQGRGAENILFSILL--------KPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAH 124 (431)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHHHHHHHhC--------CCCCEE-ccCCcccchHHHHHhCCCEeEEEeccccc
Confidence 45788899999999865 556777777754443331 245766 566544455566889999999999863
Q ss_pred --------CCCCCHHHHHHHHHhc-CCCeEEEEEeCCC-cc-cccc--cCHHHHHHHHHHcCCEEEEeccccc--ccc--
Q 002263 600 --------KGNINIEELRKAAEAN-RDNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV-- 662 (946)
Q Consensus 600 --------~g~~D~e~L~~~i~~~-~~~t~~vvvt~Pn-~~-G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~--a~~-- 662 (946)
.|.+|+++|+++|++. .+++++|++++|+ .+ |..- +++++|+++|++||++|+.|+|++. +..
T Consensus 125 ~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~ 204 (431)
T cd00617 125 DAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIK 204 (431)
T ss_pred ccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhh
Confidence 2569999999999743 2358899999995 34 6653 2578999999999999999999652 221
Q ss_pred ----ccc--CCCc------cCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 663 ----GLT--SPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 663 ----gl~--~pg~------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
+.. ++++ -..|.+++++||.++.|. .|+++.++ ++...+....+.. .+.
T Consensus 205 ~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~------GG~i~~~d~~l~~~~~~~~~~~------------~~~ 266 (431)
T cd00617 205 EREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI------GGFLALRDDELYEEARQRVVLY------------EGF 266 (431)
T ss_pred cccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc------ceEEEeCcHHHHHHHHHhcccc------------CCc
Confidence 211 1222 147999999999875443 46888886 4665432111000 000
Q ss_pred cccCccchhhHHHHHHH-HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccc---cC
Q 002263 730 IAAAPWGSALILPISYT-YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---TA 804 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a-~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~---~~ 804 (946)
+. ..|....-..|.+ .|.. +.+ . +..+..+.+++||.++|++. +.+.. +.+ .|-+.+|.+.+.. ..
T Consensus 267 ~~--~gG~~~r~~~A~A~gL~e-~~~-~-~~l~~~~~~r~~l~~~L~~~G~~v~~--P~G--gh~v~~d~~~~~~~~~~~ 337 (431)
T cd00617 267 VT--YGGMAGRDMEALAQGLRE-AVE-E-DYLRHRVEQVRYLGDRLDEAGVPIVE--PAG--GHAVFIDAREFLPHIPQE 337 (431)
T ss_pred cc--cccccHHHHHHHHHHHHh-ccc-H-HHHHHHHHHHHHHHHHHHHCCCCccC--CCc--ceEEEEEhHHhcCCCCcc
Confidence 00 0011111111111 2211 111 1 23344556779999999885 55542 223 3557788764321 01
Q ss_pred CCCHHHHHHHHH-HCCccc---CCCCC---C--------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 002263 805 GIEPEDVAKRLM-DYGFHG---PTMSW---P--------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGKA 868 (946)
Q Consensus 805 g~~~~~i~~~L~-~~Gi~~---~~~~~---p--------~~~~lri~~t~-~~t~~eid~~~~aL~~i~~e~~~~~~~~~ 868 (946)
+.+..+++.+|. +.|+.+ +.+.+ | ....+|+.+.- .-|.+++|..+++|..+.+....|..=++
T Consensus 338 ~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (431)
T cd00617 338 QFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERREDIRGLRI 417 (431)
T ss_pred cCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhhCCCeEE
Confidence 235778887766 567763 22221 2 13678998875 46889999999999999998777654455
Q ss_pred CCCCchhcc
Q 002263 869 DIHNNVLKG 877 (946)
Q Consensus 869 ~~~~~~~~~ 877 (946)
..+|.+|++
T Consensus 418 ~~~~~~lr~ 426 (431)
T cd00617 418 VYEPKLLRH 426 (431)
T ss_pred EecCcccee
Confidence 556666553
No 438
>PLN02452 phosphoserine transaminase
Probab=99.52 E-value=1.6e-12 Score=146.82 Aligned_cols=316 Identities=13% Similarity=0.065 Sum_probs=198.2
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCcccccc---CCChhh---hhhhHHHHHHHHHHHHHHHhCCCCc-ceE-EcccHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQY---TPYQAE---IAQGRLESLLNFQTMIADLTGLPMS-NAS-LLDEGTAAAE 130 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~---~pyq~e---~sqg~l~~l~e~q~~la~L~g~~~~-~~s-l~~~~Ta~~e 130 (946)
.+.| |..+|..|.+.+.. + +..| +..-.| -+.--.+.+.+.++.+.+|++.+.. .+. +..+||.++|
T Consensus 11 f~pG--P~~lp~~Vl~~~~~--~-~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e 85 (365)
T PLN02452 11 FSAG--PATLPANVLAKAQA--E-LYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA 85 (365)
T ss_pred eeCC--CCCCCHHHHHHHHH--H-HhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence 4677 66688888766553 1 1111 000111 1333457888999999999998643 233 4478899999
Q ss_pred HHHHHhccccCCCCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEec--cc------cccc--cCCCEeEEEEEcC-CCce
Q 002263 131 AMAMCNNIQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVSD--LK------DIDY--KSGDVCGVLVQYP-GTEG 198 (946)
Q Consensus 131 a~~la~~~~~~~gd~vv-v~~~~Hps~~~~~~~~a~~~gi~v~~~~--~~------~l~~--i~~~t~~v~v~~p-n~~G 198 (946)
++.+.+- . ++++++ +..+.+.....-. |+.+|...+... .. +++. .+++...|.+++. +.+|
T Consensus 86 a~~~nl~-~--~~~~~l~~~~G~fg~r~~~~---a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstG 159 (365)
T PLN02452 86 AIPLNLC-K--PGDKADFVVTGSWSKKAAKE---AKKYCKTNVIASGKDEKYTKIPSVSEWELTPDAKFVHICANETIHG 159 (365)
T ss_pred HHHHhcC-C--CCCeEEEEECCHHHHHHHHH---HHHhCCCcEEEecCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCc
Confidence 9888763 2 566665 5556664433222 344554333321 11 2222 3456777877665 6799
Q ss_pred e-ecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceE
Q 002263 199 E-VLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIV 276 (946)
Q Consensus 199 ~-i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~ 276 (946)
+ +.|++++.+ ++++||+ ..+++.. .+..+||+|+ .++||. +|.||+|++++|++++++++...
T Consensus 160 v~~~~~~~i~~------~~lvVDa-~Ss~g~~pidv~~~~v~~--~saqK~-----lGP~Gl~~v~vr~~~l~~~~~~~- 224 (365)
T PLN02452 160 VEFKDYPDVGN------VPLVADM-SSNFLSKPVDVSKYGVIY--AGAQKN-----VGPSGVTIVIIRKDLIGNARPIT- 224 (365)
T ss_pred EecCcccccCC------CeEEEEC-CccccCcccCHHHcCEEE--Eecccc-----cCCCCeEEEEEcHHHHhhcccCC-
Confidence 9 589988763 7888843 2344433 3567899877 477553 33467999999999988764211
Q ss_pred eEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcC-CC
Q 002263 277 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL-GT 354 (946)
Q Consensus 277 G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~-g~ 354 (946)
+ ..+.+....++ ..-..|+|+ ..++++.+++ .|+..+ |++++.+|..+++++|++.|++. |
T Consensus 225 ---------~-~~~~~~~~~~~-~s~~~TP~v---~~i~~l~~aL--~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G- 287 (365)
T PLN02452 225 ---------P-GMLDYKIHAEN-DSLYNTPPC---FGIYMCGLVF--EDLLAQGGLKAMEKRNIRKADLLYDAIDESNG- 287 (365)
T ss_pred ---------C-chhhHHHHHhc-CCccCChhH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 1 11222111110 011246666 6777777776 666665 89999999999999999999986 6
Q ss_pred E-EE-cCCC-Cc-CeEEEecCC---HHHHHHHHHHcCCeeee--ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 355 V-EV-QGLP-FF-DTVKVKCAD---AHAIASAAYKIEMNLRV--VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 355 ~-~~-~~~~-~~-~~~~i~~~~---~~~v~~~L~~~GI~~~~--~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ .. ..+. +. ..++|++++ ..++.+.+.++|+..-. ..-+.+|+|.-...+.+++++|++.++.
T Consensus 288 ~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~ 359 (365)
T PLN02452 288 FYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD 359 (365)
T ss_pred cccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHH
Confidence 6 21 1111 12 256777665 57899999999997521 1123499999888899999999998863
No 439
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.52 E-value=4.6e-13 Score=152.93 Aligned_cols=209 Identities=19% Similarity=0.172 Sum_probs=141.1
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|+.+..++ +++ . .++++|++++..|+.... .+...|++++.++.
T Consensus 52 ~~~Le~~la~l~g~~~a-l~~~SG~~Al~~~-l~~---l-----~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEGGVKG-FAFASGLAGIHAV-FSL---F-----QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhCCCCE-EEECCHHHHHHHH-HHH---c-----CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 45788999999998765 5557777655322 221 1 256889998775543322 24567899988875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 122 -----~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~-di~~I~~la~~~gi~vivD~t~a~--~~~~~p~~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK---PNTKALYLETPSNPLLKIT-DLAQCASVAKDHGLLTIVDNTFAT--PYYQNPLLLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCceec-CHHHHHHHHHHcCCEEEEECCccc--cccCCccccCCCEEE
Confidence 38999999986 789999999995 789987 899999999999999999988642 234567788999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+|++|+++.| |..-.|++.+++ .+...+.. . + +..+..-+ . ..+| +...|-+.
T Consensus 191 ~S~tK~l~g~---~d~~gG~vv~~~~~~~~~~~~--~----------~-~~~G~~~~-----~---~~~~--l~~~gl~t 244 (380)
T PRK06176 191 HSGTKYLGGH---SDVVAGLVTTNNEALAQEIAF--F----------Q-NAIGGVLG-----P---QDSW--LLQRGIKT 244 (380)
T ss_pred ecCceeccCC---ccceeeEEEecHHHHHHHHHH--H----------H-HHhcCCCC-----H---HHHH--HHHhccCc
Confidence 9999998532 111256677653 33322210 0 0 00011000 0 1133 34445566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 002263 756 LTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~ 777 (946)
+..+.++...++..+++.|++.
T Consensus 245 l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 6667777778899999999875
No 440
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.52 E-value=5.4e-12 Score=138.38 Aligned_cols=374 Identities=16% Similarity=0.181 Sum_probs=229.8
Q ss_pred CCCCHHHHHHHHHHHHcCccCcCCcccccee---eecCCCc-cccccc--ccCccccccCCCCcccccccHHHHHHHHHH
Q 002263 454 KYHTEHELLRYIHLLQSKELSLCHSMIPLGS---CTMKLNA-TTEMMP--VTWPSFANIHPFAPADQAQGYQEMFNNLGE 527 (946)
Q Consensus 454 ~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs---~~~~~~~-~~~~~~--~~~~~f~~~~p~~p~e~~qG~~~~~~el~~ 527 (946)
++-+.++++.-++++--.+..-+++..++-+ ++. ++. ..++.. +.--+|... .++...++.--.-.
T Consensus 49 ~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyfpa~~s-~~siladmLs~~i~~vGFtW~-------ssPa~TELE~ivmD 120 (511)
T KOG0628|consen 49 KPESWEDILGDLEKIIMPGITHWQHPHFHAYFPAGNS-YPSILADMLSGGIGCVGFTWA-------SSPACTELEVIVMD 120 (511)
T ss_pred ChhhHHHHHHHHHHHccCCCcccCCCceeeEccCccc-hHHHHHHHHhcccccccceee-------cCcchHHHHHHHHH
Confidence 3457788888888877777554444433221 110 011 111111 111123321 12334455555678
Q ss_pred HHHHhhCCCccc--c--------cCCchHHHHHHHHHHHHHHHHh-cCC----------CCCCEEEEcCCCCCCCHHHHH
Q 002263 528 WLCTITGFDSFS--L--------QPNAGAAGEYAGLMVIRAYHKA-RGD----------HHRNVCIIPVSAHGTNPATAA 586 (946)
Q Consensus 528 ~la~l~G~~~~~--l--------~~~sGa~ge~a~l~a~r~y~~~-~G~----------~~~~~Ili~~saHg~~~~~a~ 586 (946)
||+++++++... . ..++.+.+++.++++.|.-... -+. ..+-.++.++.+|.+..+++.
T Consensus 121 WL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~ 200 (511)
T KOG0628|consen 121 WLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACL 200 (511)
T ss_pred HHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHh
Confidence 999999988531 1 1122334455556665542111 111 123456789999999999999
Q ss_pred HcCCEEEEEcCCCCCCCCHHHHHHHHHhcCC--CeE-EEEEeCCCc-ccccccCHHHHHHHHHHcCCEEEEecccccccc
Q 002263 587 MCGMKIVSVGTDAKGNINIEELRKAAEANRD--NLS-TLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 587 ~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~--~t~-~vvvt~Pn~-~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
..|++++.++.|.+..++.+.|+++|++... -+- .++.|..+| .-.+| ++.+|..+|+++|+|+|||+|++.+.
T Consensus 201 i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D-~l~elg~Vc~~~glWLHVDAAYAGsa- 278 (511)
T KOG0628|consen 201 IAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFD-ELEELGPVCREEGLWLHVDAAYAGSA- 278 (511)
T ss_pred hcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccc-cHHHhcchhhhcCEEEEeehhhcccc-
Confidence 9999999999999999999999999986322 122 233444332 33456 79999999999999999999875221
Q ss_pred cccCC-------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCCCCcc-------ccCCCCCCCCCCCC
Q 002263 663 GLTSP-------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHPV-------VSTGGIPAPEKSQP 726 (946)
Q Consensus 663 gl~~p-------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp~~~v-------~~~~d~~~~~~~~~ 726 (946)
+.-| |-.-+|...+|.|||+.+-+++. .+++++. +.+.+.-..+ +...|+ ..+
T Consensus 279 -~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs-----~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dy-----rhw 347 (511)
T KOG0628|consen 279 -FICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCS-----PLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDY-----RHW 347 (511)
T ss_pred -ccCHHHHHHhhcchhhccccCChhheeEEeeeee-----cceeecCceeeeeeecChHhhcchhhccCCCc-----ccc
Confidence 2222 22347999999999998887775 5777653 2222210000 001111 001
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccC
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTA 804 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~ 804 (946)
.-+.|.....+.-|..++.+|-+++++..++.+++++++.+-+.+- |++..+ ..+--++|+..+ .
T Consensus 348 -----qipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~----~~lgLvcFRlk~----~ 414 (511)
T KOG0628|consen 348 -----QIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK----RILGLVCFRLKG----D 414 (511)
T ss_pred -----ccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc----cccceeEEeecC----C
Confidence 0133456667789999999999999999999999999999888764 666432 233345676652 2
Q ss_pred CCCHHHHHHHHHHCC-cccCCCCCCCCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHH
Q 002263 805 GIEPEDVAKRLMDYG-FHGPTMSWPVPGTLMIEPTES-ESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 805 g~~~~~i~~~L~~~G-i~~~~~~~p~~~~lri~~t~~-~t~~eid~~~~aL~~i~~e~~ 861 (946)
+...+.+.+++.+.| ++.....+...-.||++++.. ++.++|+.-.+.+.++..++.
T Consensus 415 N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 415 NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 344567888888654 553322211123589888764 556788888888888777644
No 441
>PLN02242 methionine gamma-lyase
Probab=99.52 E-value=4.1e-13 Score=154.98 Aligned_cols=261 Identities=18% Similarity=0.220 Sum_probs=167.2
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH-----HHcCCEEEEEc
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA-----AMCGMKIVSVG 596 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a-----~~~G~~vv~v~ 596 (946)
..++++.++++.|.+.+. ..++|.++..++++++. +++++||++...++.+...+ ...|++++.++
T Consensus 78 ~~~LE~~lA~l~g~~~~l-~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALEGTEAAY-CTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHhCCCeEE-EEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 557889999999998764 45677766654444332 25688999887655444432 35788888776
Q ss_pred CCCCCCCCHHHHHHHHHhcCC-CeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 597 TDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~-~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
. .|+++++++++ + +|++|++++| |.+|.+. |+++|+++||++|+++++|.++. . ....|..+|+|+
T Consensus 149 ~-----~d~e~l~~~i~---~~~tklV~lesp~NPtG~v~-dl~~I~~la~~~gi~livDea~~--~-~~~~~~~~g~di 216 (418)
T PLN02242 149 I-----TDLEAVKKAVV---PGKTKVLYFESISNPTLTVA-DIPELARIAHEKGVTVVVDNTFA--P-MVLSPARLGADV 216 (418)
T ss_pred C-----CCHHHHHHhcC---cCCCEEEEEecCCCCCCccc-CHHHHHHHHHHhCCEEEEECCCC--c-cCCCHHHcCCcE
Confidence 5 38999999996 5 5999999999 5789988 89999999999999999998763 1 223566779999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
++.+++|+|+.+ |...+|++++++++...+.....+ +....+ .......||. ...+-+
T Consensus 217 vv~S~SK~l~g~---g~~~gG~iv~~~~li~~l~~~~~~---------~~~~~g--------~~~~~~~A~l--~~~~l~ 274 (418)
T PLN02242 217 VVHSISKFISGG---ADIIAGAVCGPAELVNSMMDLHHG---------ALMLLG--------PTMNPKVAFE--LSERLP 274 (418)
T ss_pred EEEeCccccCCC---CCceEEEEEcCHHHHHHHHHHhhh---------hhhccC--------CCCCHHHHHH--HHcCCC
Confidence 999999998522 112258888877655443210000 000001 1111112333 334444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH--CCcccCCCCCCCCC
Q 002263 755 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD--YGFHGPTMSWPVPG 831 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~--~Gi~~~~~~~p~~~ 831 (946)
-+..+.++..++++++++.|+++ +.+.|++- . +-...+++++.+. .|+ ++
T Consensus 275 tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l------------~------~~p~~~~~~~~~~~~~g~---------g~ 327 (418)
T PLN02242 275 HLSLRMKEHCRRAMEYAKRMKELGLKVIYPGL------------E------DHPQHALLKSMANKGYGF---------GG 327 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCEEECCCC------------C------CCccHHHHHHhcccCCCc---------ee
Confidence 45556667788999999999886 34433321 0 1123566666542 121 23
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
-+-|.+ . ++++..+|++.|+-
T Consensus 328 ~~sf~l--~-~~~~~~~f~~~l~~ 348 (418)
T PLN02242 328 LLCLDM--D-TEERANRLMRYLQN 348 (418)
T ss_pred EEEEEE--C-CHHHHHHHHHHhhc
Confidence 334443 3 57788899988863
No 442
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=6e-13 Score=152.25 Aligned_cols=257 Identities=20% Similarity=0.185 Sum_probs=163.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH---HHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a---~~~G~~vv~v~~~ 598 (946)
..++++.++++.|.+.+ +..++|..+..++++++. +++++|+++...|+.+...+ ...|++++.+.
T Consensus 55 ~~~lE~~lA~l~g~~~~-l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-- 123 (385)
T PRK08574 55 LRPLEEALAKLEGGVDA-LAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-- 123 (385)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence 45788999999998754 445677766644443331 25689999988887766554 44688887764
Q ss_pred CCCCCCHHHHHHHHHhcCC-CeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 599 AKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~-~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ + +|++|++.+| |.+|.+. |+++|+++||++|+++++|+++. .+....|.++|+|+++
T Consensus 124 ----~d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~-dl~~I~~la~~~gi~livD~t~a--~~~~~~~l~~GaDivv 193 (385)
T PRK08574 124 ----PSTEDIIEAIK---EGRTKLVFIETMTNPTLKVI-DVPEVAKAAKELGAILVVDNTFA--TPLLYRPLRHGADFVV 193 (385)
T ss_pred ----CCHHHHHHhcC---ccCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCC--ccccCChhhhCCcEEE
Confidence 36899999996 5 8999999998 5789887 79999999999999999999864 2223456678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|++|+|+.| |..-.|.+.+ ++.+...+... + ...+. +.+ . ..|| +...|-+-
T Consensus 194 ~S~sK~l~g~---~d~~gG~vi~~~~~~~~~~~~~------------~-~~~g~-~~~----p---~~a~--l~l~~l~t 247 (385)
T PRK08574 194 HSLTKYIAGH---NDVVGGVAVAWSGEFLEELWEW------------R-RRLGT-IMQ----P---FEAY--LVLRGLKT 247 (385)
T ss_pred eeCceeecCC---CCceeEEEEECcHHHHHHHHHH------------H-HhcCC-CCC----H---HHHH--HHHcccCc
Confidence 9999998522 1112464545 44443322100 0 00111 100 1 1122 33334444
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-CCcccCCCCCCCCC
Q 002263 756 LTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWPVPG 831 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~---v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~Gi~~~~~~~p~~~ 831 (946)
+..+.++..+++.++++.|+++.. |.|++ +. .-...+++++.+. .|+ ++
T Consensus 248 L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~---------------l~---~~~~~~~~~~~~~~~g~---------g~ 300 (385)
T PRK08574 248 LEVRFERQCRNAMAIAEFLSEHPKVAEVYYPG---------------LP---SDPYHGVAKRLFGKDLY---------GG 300 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCEEECCC---------------CC---CCchHHHHHHhCCCCCc---------ce
Confidence 666677778899999999987532 22322 11 1234567776542 221 23
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~ 854 (946)
.+.|.+ ..+.++..+|++.|+
T Consensus 301 ~~s~~l--~~~~~~~~~~~~~l~ 321 (385)
T PRK08574 301 VVSFRV--KGGRDAVLKFLRSLK 321 (385)
T ss_pred EEEEEe--CCCHHHHHHHHHcCC
Confidence 344444 235778888888885
No 443
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.51 E-value=2.8e-12 Score=148.61 Aligned_cols=141 Identities=24% Similarity=0.234 Sum_probs=115.8
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---c
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 178 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~ 178 (946)
.++++.+|+++|.+. +.++++|++++.++++++. . +||+||++...|+.+...+...++..|++++.+|.+ +
T Consensus 60 ~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~-~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~ 134 (418)
T TIGR01326 60 DVLEQRIAALEGGVA--ALAVASGQAAITYAILNLA-Q--AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE 134 (418)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh-C--CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 467889999999754 7788999998887776652 3 799999999999888887766667789999998864 4
Q ss_pred ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-cccc
Q 002263 179 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 248 (946)
Q Consensus 179 l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg 248 (946)
+++ +++++++|++.+| |.+|.+.|+++|+++||++|+++++| +.++.+....+.++|+|+++.|. |+|+
T Consensus 135 l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD-~t~~~~~~~~~l~~g~Divv~S~sK~l~ 206 (418)
T TIGR01326 135 FEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVD-NTFATPYLCRPIDHGADIVVHSATKYIG 206 (418)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCchhhcCCchhcCCeEEEECcccccc
Confidence 555 7788999999988 77999999999999999999999994 34455555566778999999998 7775
No 444
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.51 E-value=1.1e-12 Score=144.98 Aligned_cols=161 Identities=22% Similarity=0.202 Sum_probs=129.4
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccccccc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY 181 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~ 181 (946)
..++..+++|.|++. +.++++|.+++.++++.+. . .+++||....++..+...++.....+|++...+|++++++
T Consensus 80 ~~le~~iaal~ga~~--~l~fsSGmaA~~~al~~L~-~--~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~ 154 (409)
T KOG0053|consen 80 DVLESGIAALEGAAH--ALLFSSGMAAITVALLHLL-P--AGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKK 154 (409)
T ss_pred HHHHHHHHHHhCCce--EEEecccHHHHHHHHHHhc-C--CCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHH
Confidence 346689999999876 7788999988887776653 3 7899999999999999998877778999999999876653
Q ss_pred ----cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 182 ----KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 182 ----i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
+.++|++|++..| |.+..+.||++|+++||++|++++|+ +.++-+...+|-.+|||||+.|+ |.|++--.
T Consensus 155 ~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVD-nTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsd--- 230 (409)
T KOG0053|consen 155 ILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVD-NTFGSPYNQDPLPLGADIVVHSATKYIGGHSD--- 230 (409)
T ss_pred HHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEe-CCcCcccccChhhcCCCEEEEeeeeeecCCcc---
Confidence 6788999999998 88999999999999999999999994 56666667788999999999998 88864211
Q ss_pred CceEEEEEc-hhhhhcC
Q 002263 256 PHAAFLATS-QEYKRMM 271 (946)
Q Consensus 256 P~~g~l~~~-~~~~~~l 271 (946)
==+|.+.++ +++.+++
T Consensus 231 vi~G~iv~n~~~~~~~l 247 (409)
T KOG0053|consen 231 VIGGSVVLNSEELASRL 247 (409)
T ss_pred eeeeEEecCcHHHHHHH
Confidence 113555554 4444433
No 445
>PRK05939 hypothetical protein; Provisional
Probab=99.51 E-value=4.1e-12 Score=145.83 Aligned_cols=235 Identities=16% Similarity=0.119 Sum_probs=149.5
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHHHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~~~G~~vv~v~~~ 598 (946)
..++++.++++.|.... +..++|..+..++++++. +++++||++...|+.+.. .+...|++++.++.
T Consensus 49 ~~~lE~~la~leg~~~~-v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~- 118 (397)
T PRK05939 49 TAALEAKITKMEGGVGT-VCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA- 118 (397)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-
Confidence 45788999999998764 445567655544443331 256889999888876654 35568999999986
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEe
Q 002263 599 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 677 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~ 677 (946)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....|.++|+|+++.
T Consensus 119 ----~d~e~l~~~l~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~t~a~~--~~~~~~~~gaDivv~ 188 (397)
T PRK05939 119 ----TDVQNVAAAIR---PNTRMVFVETIANPGTQVA-DLAGIGALCRERGLLYVVDNTMTSP--WLFRPKDVGASLVIN 188 (397)
T ss_pred ----CCHHHHHHhCC---CCCeEEEEECCCCCCCCHH-hHHHHHHHHHHcCCEEEEECCcccc--cccCccccCCEEEEe
Confidence 38999999996 78999999998 5789887 8999999999999999999876422 234677889999999
Q ss_pred CCCcccccCCCCCCCcceeEEEecccCCCCCC-CccccCCCCCCCCCCCCCCCcc---cCccchhhHHHHHHHHHHHHcH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPAPEKSQPLGTIA---AAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~---~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
++||+|+. .|-.+|.+.+.....+.... .......++.. .......+. ..-+|.....- -+|+...|-
T Consensus 189 S~sK~~~g----~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~~~p~--~a~l~~rgl 260 (397)
T PRK05939 189 SLSKYIAG----HGNALGGAVTDTGLFDWSAYPNIFPAYRKGDP--QQWGLTQIRKKGLRDMGATLSSE--AAHRIAIGA 260 (397)
T ss_pred cCeecccC----CCCeEEEEEecCcccccccccchhhhhhccch--hhHHHHHHHHHHHHhcCCCCCHH--HHHHHHcCc
Confidence 99999962 13344544443221111000 00000000000 000000000 00001111111 234556666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 002263 754 KGLTEASKIAILNANYMAKRLEKHY---PILFRG 784 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~ 784 (946)
+-+..+.+++.+||..+++.|+++. .|.|++
T Consensus 261 ~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~ 294 (397)
T PRK05939 261 ETLALRVDRSCSNALALAQFLEAHPKVARVYYPG 294 (397)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 7777788888899999999998752 345554
No 446
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.51 E-value=2.8e-13 Score=136.01 Aligned_cols=161 Identities=27% Similarity=0.379 Sum_probs=117.2
Q ss_pred HHHHHHHHHHhh--CCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH-HHHHHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP-ATAAMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~--G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~-~~a~~~G~~vv~v~~~ 598 (946)
+.++++++++++ +.+.+.+.+ +|+.+...++++++ .++++|+++...|+.+. ..+...|++++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~-~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVP-SGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeC-CcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 357889999999 555444444 66666655544432 13578999988888888 7788999999999987
Q ss_pred CCCCCCH--HHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc--CCCccCCC
Q 002263 599 AKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--SPGYIGAD 673 (946)
Q Consensus 599 ~~g~~D~--e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~--~pg~~GaD 673 (946)
.++..+. +++++... .++++++++++|+ ..|... ++++|.++||++|+++++|+++........ .+...++|
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~-~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d 149 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLV-PLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGAD 149 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEc-CHHHHHHHHHHcCCEEEEecccccccccccccccccccCC
Confidence 6654433 35544432 3788999999986 567776 789999999999999999998643222210 23456899
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEe
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVK 700 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~ 700 (946)
+++.++||+| |+|++|++.++
T Consensus 150 ~~~~s~~K~~------~~~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNL------GGEGGGVVIVK 170 (170)
T ss_pred EEEEEccccc------CCCceEEEEeC
Confidence 9999999998 34899999875
No 447
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=6.3e-13 Score=152.64 Aligned_cols=260 Identities=17% Similarity=0.145 Sum_probs=164.1
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
..+++++++++.|.+.+ +..++|.++...++.++. .++++|+++...|+.... .+...|++++.++.
T Consensus 66 ~~~le~~lA~l~g~~~~-i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 66 VQAFEEKVRILEGAEAA-TAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 56789999999998764 556677665543333321 256889998887654322 24567999887764
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.... ...|..+|+|+++
T Consensus 137 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~-dl~~I~~la~~~gi~livD~t~a~~~--~~~~l~~~~Divv 205 (398)
T PRK08249 137 -----GDHEQIEAEIA---KGCDLLYLETPTNPTLKIV-DIERLAAAAKKVGALVVVDNTFATPI--NQNPLALGADLVI 205 (398)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCcCccc--cCCchhhCCCEEe
Confidence 58999999996 78999999999 5789987 89999999999999999999864222 2345568999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.|++|+|+.+ |.-..|+++.++++.+.+... + ...+ .+.+ . ..+|. ..-+-+-+
T Consensus 206 ~S~sK~l~g~---~~~~gG~vv~~~~l~~~l~~~------------~-~~~g-~~~s----~---~~a~l--~l~~l~tL 259 (398)
T PRK08249 206 HSATKFLSGH---ADALGGVVCGSKELMEQVYHY------------R-EING-ATMD----P---MSAYL--ILRGMKTL 259 (398)
T ss_pred ccCceecCCC---CCceEEEEECCHHHHHHHHHH------------H-HhcC-CCCC----H---HHHHH--HHhCcchH
Confidence 9999998521 111236666665554433100 0 0001 1111 1 12232 23344455
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 002263 757 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 836 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~ 836 (946)
..+.++..+++..+++.|+++..+. -+..+.+. .....+++++.+ .|+ ++.+-|.
T Consensus 260 ~~R~~~~~~na~~la~~L~~~p~v~------------~V~yP~l~---~~~~~~~~~~~~-~g~---------g~~~sf~ 314 (398)
T PRK08249 260 KLRVRQQQESAMALAKYLQTHPKVE------------AVYYPGLE---THPNHEIAKAQM-RGF---------GGILSFV 314 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCee------------EEECCCCC---CCccHHHHHhhC-CCC---------CceEEEE
Confidence 5666777899999999998753221 01122111 123356666643 231 2434444
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALI 854 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~ 854 (946)
+. .+.+...+|++.|+
T Consensus 315 ~~--~~~~~~~~f~~~l~ 330 (398)
T PRK08249 315 LK--GGMDTVKRLLPKLR 330 (398)
T ss_pred Ec--CCHHHHHHHHHhCC
Confidence 43 35677888888885
No 448
>PRK07908 hypothetical protein; Provisional
Probab=99.51 E-value=2.4e-12 Score=146.09 Aligned_cols=279 Identities=15% Similarity=0.113 Sum_probs=170.4
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.+|.+...+..++|++. +..++++ + . + +.++++..........++..|++++.+++++++.
T Consensus 61 ~~lr~aia~~~~~~~~~I~it~Ga~~--al~~~~~-l--~----~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~ 130 (349)
T PRK07908 61 RRARAAVAARHGRTPDEVLLLAGAAE--GFALLAR-L--R----P-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFR 130 (349)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHh-c--C----C-CeEEEeCCCChHHHHHHHHcCCEEEeeccCcccC
Confidence 45778888888887766666666542 2223333 2 1 2 3456655444334445778999999999987778
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCC-CccCC-CE-EEeC
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GYIGA-DV-CHLN 678 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p-g~~Ga-Di-~~~s 678 (946)
+|++++ + ++++++++++| |.+|.+. +.++|.++|+ ++.++++|+++..-..+-..+ ..... ++ ++.|
T Consensus 131 ~d~~~l----~---~~~~~i~l~np~NPTG~~~-~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S 201 (349)
T PRK07908 131 LDPAAV----P---DDADLVVIGNPTNPTSVLH-PAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRS 201 (349)
T ss_pred cChhHh----c---cCCCEEEEcCCCCCCCCCc-CHHHHHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEee
Confidence 888854 3 56778999999 5799998 6899999996 488999999863211111111 11122 34 4458
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
++|+|+. .|.++|++++++++.+.+.... ...++++ ....++.+++...+.+-+++
T Consensus 202 ~SK~~~l----~GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~------~~~~a~~~~~~~~~~~~~~~ 257 (349)
T PRK07908 202 LTKTWSL----AGLRVGYALGAPDVLARLTRGR--------------AHWPVGT------LQLEAIAACCAPRAVAEAAA 257 (349)
T ss_pred cccccCC----ccceeeeeecCHHHHHHHHhcC--------------CCCCccH------HHHHHHHHHhcccchHHHHH
Confidence 8998854 3788999999877665432110 0011111 11111222222112233455
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC--CCCEEEE
Q 002263 759 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP--VPGTLMI 835 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p--~~~~lri 835 (946)
..++...+.+++.+.|++. .+.+..+.+.. -++++++ +...+.+.|.++||.+.. ..|+ .++++||
T Consensus 258 ~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~--~~~~~~~--------~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRi 326 (349)
T PRK07908 258 DAARLAADRAEMVAGLRAV-GARVVDPAAAP--FVLVRVP--------DAELLRKRLRERGIAVRRGDTFPGLDPDYLRL 326 (349)
T ss_pred HHHHHHHHHHHHHHHHHhC-CcEeccCCCce--EEEEECC--------cHHHHHHHHHhCCEEEEECCCCCCCCCCeEEE
Confidence 5566667788888999875 33222211211 1445543 256888899999998642 2343 2579999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
++. +.+++++|+++|++++.
T Consensus 327 s~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 327 AVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred EeC---CCccHHHHHHHHHHHHh
Confidence 994 67899999999988743
No 449
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.51 E-value=1.4e-11 Score=141.43 Aligned_cols=323 Identities=11% Similarity=0.086 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhC--CccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC
Q 002263 38 ESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN--PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP 115 (946)
Q Consensus 38 e~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~--~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~ 115 (946)
+..+..-+..+++.+. ..+ +|.+..+...|+.+.+.+.+. ...++.|.+. +| ..++++.+|+++|.+
T Consensus 14 ~~~~~~~~~~~~~~~~-~i~-l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-----~g----~~~lr~~ia~~l~~~ 82 (380)
T PRK06225 14 FKTSNEFFDYVFKDKE-MIW-MGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPP-----EG----FPELRELILKDLGLD 82 (380)
T ss_pred hhhHHHHHHHHhhcCC-eEE-ccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC-----cc----hHHHHHHHHHhcCCC
Confidence 3334444555554332 222 355655556666665554422 1223333222 22 446788999999999
Q ss_pred CcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----------ccccc-cC
Q 002263 116 MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KS 183 (946)
Q Consensus 116 ~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-----------~~l~~-i~ 183 (946)
+.++.+++|+|.++..++.++. . +|++|++++..|+.....+ +..|.+++.+++ +++++ ++
T Consensus 83 ~~~v~~~~g~t~al~~~~~~~~-~--~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~ 155 (380)
T PRK06225 83 DDEALITAGATESLYLVMRAFL-S--PGDNAVTPDPGYLIIDNFA----SRFGAEVIEVPIYSEECNYKLTPELVKENMD 155 (380)
T ss_pred CCcEEEeCCHHHHHHHHHHHhc-C--CCCEEEEcCCCCcchHHHH----HHhCceEEeeccccccCCccCCHHHHHhhcC
Confidence 9999999999977766555442 2 7899999998887554443 346777777654 23444 56
Q ss_pred CCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCc--cccCCCCCC--CccceEEEecc-ccccccCCCC
Q 002263 184 GDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLL--ALTILKPPG--ELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 184 ~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~--al~~l~~~~--~~GaDi~v~s~-k~lg~P~~~G 254 (946)
+++++|++.+| |.+|.+. ++++|+++|+++|++++++.-.. ..+.. ... +-...+++.|. |.||.|
T Consensus 156 ~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~i~~~s~SK~~g~~---- 230 (380)
T PRK06225 156 ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHT-LAAEYAPEHTVTSYSFSKIFGMA---- 230 (380)
T ss_pred CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCC-chhhcCCCCEEEEeechhhcCCc----
Confidence 78999988888 6799864 59999999999999999943110 01110 001 11345677775 877432
Q ss_pred CCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 255 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 255 GP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
|-.+|++++++++++.+.... +...+++... ..++...+.. ..+-++++
T Consensus 231 G~RiG~i~~~~~l~~~~~~~~-----------------------------~~~~~~~~~~-~~~a~~~l~~-~~~~~~~~ 279 (380)
T PRK06225 231 GLRIGAVVATPDLIEVVKSIV-----------------------------INDLGTNVIA-QEAAIAGLKV-KDEWIDRI 279 (380)
T ss_pred cceeEEEecCHHHHHHHHHHH-----------------------------hcccCCCHHH-HHHHHHHHhc-chHHHHHH
Confidence 334799999888776552100 0011111111 1111111111 11223455
Q ss_pred HHHHHHHHHHHHHHHhcC-CCEEEc-CCCCcCeEEEecC----CHHHHHHHHHHcCCeeeee-------cCCeEEEEecc
Q 002263 335 AQRVHGLAGTFALGLKKL-GTVEVQ-GLPFFDTVKVKCA----DAHAIASAAYKIEMNLRVV-------DSNTVTASFDE 401 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~-g~~~~~-~~~~~~~~~i~~~----~~~~v~~~L~~~GI~~~~~-------~~~~lris~~~ 401 (946)
.+...++.+++.+.|+++ | +.+. ..+...-+.+.++ +..++.+.|.++||.++.. .++.+|+|+..
T Consensus 280 ~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~ 358 (380)
T PRK06225 280 RRTTFKNQKLIKEAVDEIEG-VFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI 358 (380)
T ss_pred HHHHHHHHHHHHHHHHhCcC-CccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC
Confidence 555566677788888875 4 4321 1111112333332 2778999999999987542 23589999864
Q ss_pred CCCHHHHHHHHHHHhC
Q 002263 402 TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 402 ~~t~edid~ll~~l~~ 417 (946)
++++++++++.|..
T Consensus 359 --~~e~l~~~~~~l~~ 372 (380)
T PRK06225 359 --PREQVEVFCEEFPD 372 (380)
T ss_pred --CHHHHHHHHHHHHH
Confidence 78999999999964
No 450
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=1.9e-12 Score=149.62 Aligned_cols=279 Identities=18% Similarity=0.160 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|..+..++++++. .++++|+++...|+..... +...|++++.++
T Consensus 71 ~~~Le~~lA~l~g~~~a-v~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALEGGVAA-LLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 44788999999998865 555677766654444331 2468899888766544332 334788888885
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+. .|+++++++++ ++|++|+++.| |.+|.+. |+++|+++||++|++++||+++.. +.+..|-++|+|+++
T Consensus 141 d~---~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~-Dl~~I~~la~~~gi~liVD~t~a~--~~~~~pl~~GaDivv 211 (436)
T PRK07812 141 DP---DDLDAWRAAVR---PNTKAFFAETISNPQIDVL-DIPGVAEVAHEAGVPLIVDNTIAT--PYLIRPLEHGADIVV 211 (436)
T ss_pred CC---CCHHHHHHhCC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhcCCCEEE
Confidence 22 38999999886 78999999998 5789998 899999999999999999998643 233567788999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccC--CCCCC---CC-CCCCCC-Cc---ccCccchhhHHHHHH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVST--GGIPA---PE-KSQPLG-TI---AAAPWGSALILPISY 745 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~--~d~~~---~~-~~~~~~-~i---~~~~~g~~~~~~~a~ 745 (946)
.|+||+++. | |+ .+|.+.+. ..+...-+....-.+ .++.. .. +.+... .+ .....|..+... -
T Consensus 212 ~S~tK~lgg-~--G~-~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~--~ 285 (436)
T PRK07812 212 HSATKYLGG-H--GT-AIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPF--N 285 (436)
T ss_pred EecccccCC-C--CC-eEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHH--H
Confidence 999999851 1 11 13444443 221100000000000 00000 00 000000 00 000001111111 2
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCe---eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v---~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
+|+...|-+-+..+.++..++|..+++.|+++..| .|+| +. .....+++++.+..|+
T Consensus 286 a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPg---------------l~---s~p~~~~~~~~~~~g~-- 345 (436)
T PRK07812 286 AFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAG---------------LP---SSPWYERAKRLAPKGT-- 345 (436)
T ss_pred HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC---------------CC---CCccHHHHHHhCcCCC--
Confidence 34556666677778888899999999999987433 2221 11 1123566666543332
Q ss_pred CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 823 PTMSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 823 ~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
++.+-|.+. .+.++.++|++.|+
T Consensus 346 -------gg~~sf~l~--~~~~~~~~f~~~l~ 368 (436)
T PRK07812 346 -------GAVLSFELA--GGVEAGKAFVNALT 368 (436)
T ss_pred -------ceEEEEEec--CCHHHHHHHHHhCC
Confidence 244444442 35677888888885
No 451
>PRK09105 putative aminotransferase; Provisional
Probab=99.50 E-value=6.9e-12 Score=143.28 Aligned_cols=297 Identities=14% Similarity=0.098 Sum_probs=189.8
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN 137 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~ 137 (946)
+++.|..+...|+.+.+.+.+..... ..|.+. ...++++.+|+.+|.++.++.+++|++.++..++.++.
T Consensus 47 ~l~~~~~~~~~~~~~~~a~~~~~~~~---~~Y~~~-------~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~ 116 (370)
T PRK09105 47 FLNANECPLGPSPAARDAAARSAALS---GRYDLE-------LEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT 116 (370)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHh---cCCCCc-------hHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc
Confidence 56666656667777766655432111 223221 14467788999999999999999999977766655542
Q ss_pred cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccccCCCEeEEEEEcC-CCceeecchHHHHH
Q 002263 138 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIK 208 (946)
Q Consensus 138 ~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~i~~~t~~v~v~~p-n~~G~i~di~~i~~ 208 (946)
. +||+|++++-.|+.+...++ ..|++++.++.+ ++++..+++++|++.+| |.+|.+.+.+++.+
T Consensus 117 -~--~gd~Vli~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~ 189 (370)
T PRK09105 117 -S--PTAGLVTADPTYEAGWRAAD----AQGAPVAKVPLRADGAHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEW 189 (370)
T ss_pred -C--CCCEEEEeCCChHHHHHHHH----HcCCeEEEecCCCCCCCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHH
Confidence 3 78999999999998876643 468888887653 22222356888999998 67999998888877
Q ss_pred HHHh--CCcEEEEEecCccccCCCCCC---CccceEEEe-cc-ccccccCCCCCCc--eEEEEEchhhhhcCCCceEeEe
Q 002263 209 NAHA--NGVKVVMATDLLALTILKPPG---ELGADIVVG-SA-QRFGVPMGYGGPH--AAFLATSQEYKRMMPGRIVGVS 279 (946)
Q Consensus 209 ~a~~--~gal~~v~a~~~al~~l~~~~---~~GaDi~v~-s~-k~lg~P~~~GGP~--~g~l~~~~~~~~~lp~~~~G~s 279 (946)
+++. +|++++++.-...+....+.. +.+-++++. |. |.||. || +|+++.++++++.+-.
T Consensus 190 l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~------~GlRiG~~v~~~~~i~~l~~------ 257 (370)
T PRK09105 190 LLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGM------AGMRLGLAAARPDLLAKLAR------ 257 (370)
T ss_pred HHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcC------CccceeeeecCHHHHHHHHh------
Confidence 7653 488888843111221111111 234566555 44 76643 45 7999988777665410
Q ss_pred ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC
Q 002263 280 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG 359 (946)
Q Consensus 280 ~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~ 359 (946)
- ...+.+ ... ..+++ ..+..++-+++..++..++.+++.+.|++.| +++..
T Consensus 258 ----------------------~-~~~~~~-~~~---~~aa~-~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~ 308 (370)
T PRK09105 258 ----------------------F-GHNPLP-VPA---AAAGL-ASLRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTP 308 (370)
T ss_pred ----------------------c-CCCCcC-HHH---HHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCC
Confidence 0 111111 111 11222 1122234456667777888889999999887 77653
Q ss_pred CCCcCeEEEecCC-HHHHHHHHHHcCCeeeee---cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 360 LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 360 ~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. ...-+.++.+. ..++.+.|.++||.++.. .++.+|+++. +++++++|+++|.
T Consensus 309 ~-~~~f~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~ 365 (370)
T PRK09105 309 S-QANCFMVDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFA 365 (370)
T ss_pred C-CCcEEEEeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHH
Confidence 2 22223355543 778999999999988432 2578999977 6888999999885
No 452
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.50 E-value=4.4e-12 Score=145.98 Aligned_cols=210 Identities=18% Similarity=0.219 Sum_probs=139.6
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH----HHHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~----~~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+. .+..++|+++.. ++++.+. .++++|+++...++... ..+...|++++.++.
T Consensus 62 ~~~Le~~lA~l~g~~~-~v~~~sG~~Ai~---~~l~all-----~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 62 RDLLGEALAELEGGAG-GVITATGMGAIN---LVLNALL-----QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHhCCCc-eEEEcCHHHHHH---HHHHHHh-----CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 4578899999999754 355666765443 2333332 25688998776554321 224557888888875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|..+|+|+++
T Consensus 133 -----~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~-dl~~I~~la~~~gi~vIvD~a~a~--~~~~~pl~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA---QSPKLVLIETPSNPLLRIT-DLRFVIEAAHKVGALTVVDNTFLS--PALQKPLEFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCCcc--cccCCcccccCCEEE
Confidence 48999999986 68999999999 5799997 899999999999999999998743 234567788999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|+||+|+.| |+--.|.+.++ +++.+.+... + ...+ .+.++ . .+|..+ .|-+-
T Consensus 202 ~S~tK~l~g~---~~~~~G~vv~~~~~l~~~l~~~------------~-~~~g-~~~s~----~---~a~l~~--~gl~t 255 (405)
T PRK08776 202 HSTTKYINGH---SDVVGGAVVARDAELHQQLVWW------------A-NALG-LTGSP----F---DAFLTL--RGLRT 255 (405)
T ss_pred ecCceeecCC---CCceEEEEEeCCHHHHHHHHHH------------H-HhcC-CCCCH----H---HHHHHH--hhhCc
Confidence 9999999522 11124666554 4443322100 0 0001 11111 1 133332 34445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 002263 756 LTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~ 777 (946)
+..+.++...|+..+++.|+++
T Consensus 256 l~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 256 LDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 6666777888999999999875
No 453
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.50 E-value=1.2e-12 Score=149.90 Aligned_cols=217 Identities=17% Similarity=0.181 Sum_probs=141.6
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-H---HHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-A---AMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-a---~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+. .+..++|.++...+ ++.+. .++++|+++...|+.+... . ...|++++.++
T Consensus 54 ~~~L~~~lA~l~g~~~-~i~~~sg~~Ai~~~---l~~l~-----~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 123 (386)
T PRK08045 54 RDVVQRALAELEGGAG-AVLTNTGMSAIHLV---TTVFL-----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD- 123 (386)
T ss_pred HHHHHHHHHHHhCCCe-EEEECCHHHHHHHH---HHHHc-----CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence 4478899999998654 34556665544333 33321 2568899998877643322 2 22455776664
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
..|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|-++|+|+++
T Consensus 124 ----~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~-di~~I~~ia~~~g~~vivDeay~~~--~~~~pl~~gaDivv 193 (386)
T PRK08045 124 ----QGDEQALRAALA---EKPKLVLVESPSNPLLRVV-DIAKICHLAREAGAVSVVDNTFLSP--ALQNPLALGADLVL 193 (386)
T ss_pred ----CCCHHHHHHhcc---cCCeEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCcc--ccCCchhhCCCEEE
Confidence 268999999996 689999999995 789988 7999999999999999999986432 23567778999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|+||+++.+ ++--.|.+.++ +++.+.+.. . + ..+ ..+.+ . ..+|. ...|-+-
T Consensus 194 ~S~tK~l~G~---~d~~~G~vi~~~~~~~~~l~~--~----------~-~~~-g~~~~----p---~~~~l--~~rgl~t 247 (386)
T PRK08045 194 HSCTKYLNGH---SDVVAGVVIAKDPDVVTELAW--W----------A-NNI-GVTGG----A---FDSYL--LLRGLRT 247 (386)
T ss_pred eecceeccCC---CCceeEEEEeCcHHHHHHHHH--H----------H-Hhc-CCCCC----H---HHHHH--HHhhhcc
Confidence 9999998511 11125666664 443332210 0 0 001 11111 1 12343 3444445
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 002263 756 LTEASKIAILNANYMAKRLEKHY---PILFRG 784 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~---~v~~~~ 784 (946)
+..+.++..+++..+++.|+++. .|.|++
T Consensus 248 l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~ 279 (386)
T PRK08045 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPS 279 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCC
Confidence 77777888899999999999762 344554
No 454
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.50 E-value=2.6e-12 Score=140.23 Aligned_cols=295 Identities=18% Similarity=0.146 Sum_probs=187.1
Q ss_pred HHHHHHHHHHcCccCcCCccccceeeecCCCcccc--ccc--ccCc-cccccCCCCcccccccHHHHHHHHHHHHHHhhC
Q 002263 460 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTE--MMP--VTWP-SFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 534 (946)
Q Consensus 460 e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~--~~~--~~~~-~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G 534 (946)
.++-++.+++.+.... .+||-|.+..++..- ... +.+. .+..|++ ..|..++...+.+++++++|
T Consensus 18 ~vw~e~~~la~e~~~~----~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~------~~G~p~L~~aL~k~~se~~~ 87 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP----NPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTR------GYGLPQLRKALAKAYSEFYG 87 (420)
T ss_pred cHHHHHHHHHHhcCCC----CcccCCCCCCCCcHHHHHHHHHHhccchhccccc------cCCchHHHHHHHHHHHHHhc
Confidence 6777777777765432 137776655543221 111 1222 2222433 35777888889999999887
Q ss_pred CCc---ccccCCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC--------CCCC
Q 002263 535 FDS---FSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--------AKGN 602 (946)
Q Consensus 535 ~~~---~~l~~~sGa~-ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~--------~~g~ 602 (946)
... ..+.+++|+. +.++.++++. +++|+|+|.++++..+.....|+|...+.|+.. .++.
T Consensus 88 ~~~~~~~eVlVT~GA~~ai~~~~~~l~--------~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 88 GLLDPDDEVLVTAGANEAISSALLGLL--------NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred cccCCcccEEEecCchHHHHHHHHHHc--------CCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 542 3466666764 3332333322 367999999998777777799999999999876 3478
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccc-cccccc------cCCCccCC
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGL------TSPGYIGA 672 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~-~a~~gl------~~pg~~Ga 672 (946)
+|.++|+.+++ ++|++|++++| |.+|-+- +.+++|+++|++||.+++.|.++- ....+. ..||.+.-
T Consensus 160 ~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~er 236 (420)
T KOG0257|consen 160 LDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYER 236 (420)
T ss_pred CChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhhe
Confidence 99999999998 89999999999 5788874 369999999999999999998751 111111 12777666
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH-HHHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT-YIAMM 751 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a-~l~~l 751 (946)
-+-++|+.|+|+ +-|+.+|++..++++...+. .+.. .....+|| +. |... ++|.+ -+.+.
T Consensus 237 titvgS~gKtf~----~TGWrlGW~igp~~L~~~~~--~vh~----------~~~~~~~T-p~-q~A~-a~a~~~~~~~~ 297 (420)
T KOG0257|consen 237 TITVGSFGKTFG----VTGWRLGWAIGPKHLYSALF--PVHQ----------NFVFTCPT-PI-QEAS-AAAFALELACL 297 (420)
T ss_pred EEEeccccceee----eeeeeeeeeechHHhhhhHH--HHhh----------ccccccCc-HH-HHHH-HHHHhhhhhcc
Confidence 788899999996 56899999999888775532 1111 01112222 21 1111 11111 11112
Q ss_pred cHhh--HHH-HHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecc
Q 002263 752 GSKG--LTE-ASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLR 798 (946)
Q Consensus 752 G~eG--l~~-~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~ 798 (946)
.++| +.+ +.+...++.+.|++.|.++ +++. ++.+..+ +++|++
T Consensus 298 ~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~--~p~gayy--l~adfs 344 (420)
T KOG0257|consen 298 QPGGSYFITELVKEYKEKRDILAKALEELGLKVT--GPEGAYY--LWADFS 344 (420)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc--cCCCceE--EEEecc
Confidence 2232 233 5666778899999999986 5542 3334332 456665
No 455
>PRK09265 aminotransferase AlaT; Validated
Probab=99.50 E-value=4.9e-12 Score=146.41 Aligned_cols=310 Identities=13% Similarity=0.069 Sum_probs=173.0
Q ss_pred cccHHHHHHHHHHHHHHhh--CCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 515 AQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~--G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
.+|..++...+.+++..-. +.+...+..++|++. +..++++.+. .++++|++++..|+.+...+...|.++
T Consensus 71 ~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 143 (404)
T PRK09265 71 SKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSE--LIVMAMQALL-----NNGDEVLVPAPDYPLWTAAVSLSGGKP 143 (404)
T ss_pred CCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHH--HHHHHHHHhC-----CCCCEEEEeCCCCcChHHHHHHcCCEE
Confidence 3565444433344332211 455555555556542 2233444431 256889999999888888888899999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc--c
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--L 664 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g--l 664 (946)
+.++++. ++.+|+++++++++ +++++|++++| |.+|.+. .++++|+++|+++|+++++|.++..-. .+ .
T Consensus 144 v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 220 (404)
T PRK09265 144 VHYLCDEEAGWFPDLDDIRSKIT---PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVH 220 (404)
T ss_pred EEEecccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCc
Confidence 9998764 35799999999986 68889999999 4799876 139999999999999999998763211 11 0
Q ss_pred cCCCcc--CCCE-EEeCCCcccccCCCCCCCcceeEEEe--cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 665 TSPGYI--GADV-CHLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 665 ~~pg~~--GaDi-~~~s~hK~f~~P~g~GGPg~G~i~~~--~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
.....+ ...+ ++.++.|+|+.| |.++|++++. +.+.+.+-... .. ......+.+..++.
T Consensus 221 ~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~q~- 284 (404)
T PRK09265 221 ISIASLAPDLLCVTFNGLSKAYRVA----GFRVGWMVLSGPKKHAKGYIEGL-DM----------LASMRLCANVPAQH- 284 (404)
T ss_pred CCHHHcCCCceEEEEecchhhccCc----ccceEEEEEeCchHHHHHHHHHH-HH----------HhccccCCCcHHHH-
Confidence 011111 1123 346678888543 6789999864 22111000000 00 00001111111121
Q ss_pred HHHHHHHHHHHHcHhhHHHH---HHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 740 ILPISYTYIAMMGSKGLTEA---SKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~---~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
++.+++. ..+.+.+. .++...+.+++.+.|++...+.+..+.+.++ ++++++........+.+.+.+.|.
T Consensus 285 ---~~~~~l~--~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~--l~~~~~~~~~~~~~~~~~~~~~l~ 357 (404)
T PRK09265 285 ---AIQTALG--GYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALY--AFPKLDPKVYPIHDDEQFVLDLLL 357 (404)
T ss_pred ---HHHHHhc--CchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EEEEecccccCCCCHHHHHHHHHH
Confidence 1122221 11112221 2344456677778887641222222222222 344543100000012345677788
Q ss_pred HCCccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 817 ~~Gi~~-~~~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
++|+.+ +...|. .++++|+++. .+.+++++.++.|+++++.
T Consensus 358 ~~gv~v~pg~~F~~~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 358 QEKVLLVQGTGFNWPEPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred hCCEEEECchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 999975 333342 3578999994 5688899999888877654
No 456
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.50 E-value=1.2e-12 Score=150.16 Aligned_cols=214 Identities=21% Similarity=0.233 Sum_probs=141.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-HH---HcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AA---MCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-a~---~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|+.+..++++++ . .++++||++...|+..... .. ..|++++.++.
T Consensus 63 ~~~Le~~lA~~~g~~~~-i~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 63 RTALEEQLAALEGGAYG-RAFSSGMAATDCLLRAV---L-----RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 45788999999998865 33456665554333333 2 2568899988866643332 22 25888888775
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +....|..+|+|+++
T Consensus 134 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~-dl~~I~~la~~~gi~lIvD~a~a~--~~~~~p~~~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT---PRTKLIWVETPTNPLLSIT-DIAALAELAHDAGAKVVVDNTFAS--PYLQQPLALGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCcceec-CHHHHHHHHHHcCCEEEEECCCCc--cccCCchhhCCcEEE
Confidence 48999999996 789999999995 689887 899999999999999999988642 223456678999999
Q ss_pred eCCCcccccCCCCCCCc---ceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 677 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg---~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
+|++|+|+ ||+ +|++++++ .+...+... + ..++. +.+ .. .+| +...+
T Consensus 203 ~S~sK~l~------g~~~~~gG~vv~~~~~l~~~~~~~------------~-~~~g~-~~s----~~---~a~--l~~~~ 253 (388)
T PRK07811 203 HSTTKYIG------GHSDVVGGALVTNDEELDEAFAFL------------Q-NGAGA-VPG----PF---DAY--LTLRG 253 (388)
T ss_pred ecCceeec------CCCCcEEEEEEECCHHHHHHHHHH------------H-HhcCC-CCC----HH---HHH--HHHhc
Confidence 99999985 343 57777764 443322100 0 00111 111 11 123 22333
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKHY---PILFRG 784 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~ 784 (946)
-+-+..+.++...++..+++.|+++. .+.|++
T Consensus 254 L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 288 (388)
T PRK07811 254 LKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPG 288 (388)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 33355566667789999999998752 344554
No 457
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.50 E-value=1.5e-11 Score=141.20 Aligned_cols=326 Identities=15% Similarity=0.130 Sum_probs=194.5
Q ss_pred HHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHhC--CCCc
Q 002263 41 MIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG--LPMS 117 (946)
Q Consensus 41 ~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g--~~~~ 117 (946)
..+.+..++..+....+ ++.|.-+...|+.+.+.+.+.- .-.+.|++ ++|..+....+.+.+.+..| .++.
T Consensus 12 ~~~~~~~~~~~~~~~i~-l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~G~~~lr~~la~~~~~~~~~~~~~~ 85 (382)
T PRK06108 12 GIREVANAGRGREGVLP-LWFGESDLPTPDFIRDAAAAALADGETFYTH-----NLGIPELREALARYVSRLHGVATPPE 85 (382)
T ss_pred HHHHHHHHHhccCCeEE-ecCCCCCCCCCHHHHHHHHHHHhcCCCCCCC-----CCCCHHHHHHHHHHHHHHhCCCcCcc
Confidence 34445555443322222 2445434445666654433210 00122332 24444444444455556668 5677
Q ss_pred ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-----------cccc-cCCC
Q 002263 118 NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-----------DIDY-KSGD 185 (946)
Q Consensus 118 ~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-----------~l~~-i~~~ 185 (946)
++.+++|++.++..++.++. . +||+|++++..|+.+...++ ..|++++.++.+ ++++ ++++
T Consensus 86 ~i~~t~g~~~al~~~~~~l~-~--~gd~vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~ 158 (382)
T PRK06108 86 RIAVTSSGVQALMLAAQALV-G--PGDEVVAVTPLWPNLVAAPK----ILGARVVCVPLDFGGGGWTLDLDRLLAAITPR 158 (382)
T ss_pred eEEEeCChHHHHHHHHHHhc-C--CCCEEEEeCCCccchHHHHH----HCCCEEEEeeCCCCCCCccCCHHHHHHhcCcc
Confidence 89899999877666555442 2 78999999999988776653 468888776652 3334 5668
Q ss_pred EeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCC----CC------CCccceEEEecc-cccccc
Q 002263 186 VCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----PP------GELGADIVVGSA-QRFGVP 250 (946)
Q Consensus 186 t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~----~~------~~~GaDi~v~s~-k~lg~P 250 (946)
+++|++++| |.+|.+. ++++|+++|+++|+++++|. ..+..... .+ ....-.++++|. |.|+.|
T Consensus 159 ~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (382)
T PRK06108 159 TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADE-VYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMT 237 (382)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeh-hhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCc
Confidence 899999988 6799775 57899999999999999942 11111000 01 111235777786 877543
Q ss_pred CCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhh
Q 002263 251 MGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG 330 (946)
Q Consensus 251 ~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~G 330 (946)
|-.+|++++++++++.+.... ...+ .+.+.. +..++..+...+.+-
T Consensus 238 ----G~RiG~~~~~~~~~~~~~~~~--------------------------~~~~--~~~~~~--~q~a~~~~l~~~~~~ 283 (382)
T PRK06108 238 ----GWRLGWLVAPPALGQVLEKLI--------------------------EYNT--SCVAQF--VQRAAVAALDEGEDF 283 (382)
T ss_pred ----ccceeeeeCCHHHHHHHHHHH--------------------------Hhcc--cCCChH--HHHHHHHHHhCChHH
Confidence 334799999887776551000 0001 111111 112222112234445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHH-HcCCeeeee------cCCeEEEEec
Q 002263 331 LKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVV------DSNTVTASFD 400 (946)
Q Consensus 331 l~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~-~~GI~~~~~------~~~~lris~~ 400 (946)
++++.++..++.+++.+.|+++.++++.......-+.+.+++ ..++++.|. ++||.+..- .++.+|+|++
T Consensus 284 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~ 363 (382)
T PRK06108 284 VAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA 363 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence 678888888999999999988732776532111112344442 678888875 579988431 2478999999
Q ss_pred cCCCHHHHHHHHHHHh
Q 002263 401 ETTTLEDVDKLFIVFA 416 (946)
Q Consensus 401 ~~~t~edid~ll~~l~ 416 (946)
. +.+++++.++.|.
T Consensus 364 ~--~~~~l~~~l~~l~ 377 (382)
T PRK06108 364 R--DPARLDEAVERLR 377 (382)
T ss_pred C--CHHHHHHHHHHHH
Confidence 7 8899999888875
No 458
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.50 E-value=1.1e-11 Score=142.59 Aligned_cols=311 Identities=11% Similarity=0.081 Sum_probs=190.3
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC---CcceEEcccHHHHHHHHHH
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP---MSNASLLDEGTAAAEAMAM 134 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~---~~~~sl~~~~Ta~~ea~~l 134 (946)
.+|.|..+...|..+.+.+.+.-. ......|. ..+|..+....+++.+++.+|.. ..++.+++|++.++..++.
T Consensus 31 ~l~~g~~~~~~~~~~~~a~~~~~~-~~~~~~Y~--~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~ 107 (389)
T PRK05957 31 SLGQGVVSYPPPPEAIEALNNFLA-NPENHKYQ--AVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAIL 107 (389)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHh-CCCCCCCC--CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHH
Confidence 568887776677777655543110 00112232 24677777888889999999974 4578888898877766555
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecc--
Q 002263 135 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLD-- 202 (946)
Q Consensus 135 a~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~d-- 202 (946)
++ .. +||+|++++-.|+.....+ +..|++++.++. +++++ +++++++|++.+| |.+|.+.+
T Consensus 108 ~~-~~--~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~ 180 (389)
T PRK05957 108 AI-TD--PGDEIILNTPYYFNHEMAI----TMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEA 180 (389)
T ss_pred Hh-cC--CCCEEEEeCCCCcCHHHHH----HhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHH
Confidence 54 23 7899999998887765544 246888887755 34555 6778999999988 67999886
Q ss_pred -hHHHHHHHHhCCcEEEEEecCc--cccCC--CC----CCCccceEEEecc-ccccccCCCCCCc--eEEEEEchhhhhc
Q 002263 203 -YGDFIKNAHANGVKVVMATDLL--ALTIL--KP----PGELGADIVVGSA-QRFGVPMGYGGPH--AAFLATSQEYKRM 270 (946)
Q Consensus 203 -i~~i~~~a~~~gal~~v~a~~~--al~~l--~~----~~~~GaDi~v~s~-k~lg~P~~~GGP~--~g~l~~~~~~~~~ 270 (946)
+++|+++||++|+++++|.-.. ..... .+ +...+--|++.|. |.|+. || +|++++.++++++
T Consensus 181 ~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~------~GlRiG~~~~~~~~~~~ 254 (389)
T PRK05957 181 LLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF------ASWRIGYMVIPIHLLEA 254 (389)
T ss_pred HHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccC------ccceeEEEecCHHHHHH
Confidence 8999999999999999943111 11100 01 1122233667775 87643 45 7999988877766
Q ss_pred CCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHh
Q 002263 271 MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLK 350 (946)
Q Consensus 271 lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~ 350 (946)
+... +.+.+.|++.. +..+++-....+..-+++..++..++.+++.+.|+
T Consensus 255 ~~~~----------------------------~~~~~~~~~~~--~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~ 304 (389)
T PRK05957 255 IKKI----------------------------QDTILICPPVV--SQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLG 304 (389)
T ss_pred HHHH----------------------------HhhcccCCCcH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 5210 01111221111 11111100111222356666777788888999998
Q ss_pred cCCCE-EEcCCCCcC-eEEEecC-C--HHHHHHHHH-HcCCeeeee-----c-CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 351 KLGTV-EVQGLPFFD-TVKVKCA-D--AHAIASAAY-KIEMNLRVV-----D-SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 351 ~~g~~-~~~~~~~~~-~~~i~~~-~--~~~v~~~L~-~~GI~~~~~-----~-~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+++++ .+. .+... -+.++++ + ..+++++|. ++||.+..- . ++.+|+|+... +++++++.++.|.
T Consensus 305 ~~~~~~~~~-~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~~l~ 380 (389)
T PRK05957 305 QLQDRCTLH-PANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIERLV 380 (389)
T ss_pred hcCCCcccc-CCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHHHHH
Confidence 87433 332 22111 1223443 2 678999986 579987542 1 35899999764 4666666666665
No 459
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=4.5e-12 Score=145.19 Aligned_cols=294 Identities=14% Similarity=0.125 Sum_probs=170.6
Q ss_pred ccHHHHHHHHHHHHHHhhC----CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G----~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+..| ++..++..++|++.. ..+++.... ..| .++|+++.+.++.+...+++.|++
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a--l~~~~~~~~-~~g---~~~Vlv~~P~y~~~~~~~~~~g~~ 139 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL--IRSLLIATC-LGG---EGSILVAEPTFSMYGILAQTLGIP 139 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH--HHHHHHHHc-CCC---CCeEEEcCCChHHHHHHHHHcCCE
Confidence 3544444334444433321 444456666666532 222222211 122 237999998777777778999999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHhc-CCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccccccccC
Q 002263 592 IVSVGTDAK-GNINIEELRKAAEAN-RDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTS 666 (946)
Q Consensus 592 vv~v~~~~~-g~~D~e~L~~~i~~~-~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~ 666 (946)
++.++.+++ ..+|+++|++++++. ..++++|++++| |.+|.+-+ .+++|.+++ +|+++++|.++.. +.....
T Consensus 140 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~-~~~~~~ 216 (374)
T PRK02610 140 VVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFE-FSQTTL 216 (374)
T ss_pred EEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccc-cCccch
Confidence 999998764 689999999998631 147899999999 47999862 344555444 4899999998632 111111
Q ss_pred CCcc-CC-C-EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 667 PGYI-GA-D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 667 pg~~-Ga-D-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
+... .. . |++.|+.|+|+.| |.++|++.+++++.+.+-.. +...+++ .+.+. +
T Consensus 217 ~~~~~~~~~~ivi~SfSK~~g~~----GlRiG~~v~~~~l~~~l~~~--------------~~~~~~~--~~~q~----a 272 (374)
T PRK02610 217 VGELAQHPNWVILRTFSKAFRLA----AHRVGYAIGHPELIAVLEKV--------------RLPYNLP--SFSQL----A 272 (374)
T ss_pred HHHHhcCCCEEEEEecchhccCc----ccceeeeecCHHHHHHHHHh--------------cCCCCCC--HHHHH----H
Confidence 1111 11 2 5567788888654 78999999887665543210 0001111 11111 1
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 823 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~ 823 (946)
+.+.+. ..+.+.+..+......+.+.+.|++...+.... .+..+ ++++++ .+.+..++.++|.++|+.+.
T Consensus 273 ~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~f--~~~~l~-----~~~~~~~~~~~l~~~gi~v~ 342 (374)
T PRK02610 273 AQLALE--HRQELLAAIPEILQERDRLYQALQELPQLRVWP-SAANF--LYLRLS-----QDAALAALHQALKAQGTLVR 342 (374)
T ss_pred HHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeCC-CcceE--EEEeCC-----CCCCHHHHHHHHHHCCEEEE
Confidence 222221 112333333444455666777776542221111 22222 445654 23577899999999999875
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 824 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 824 ~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.. .+++||++. +.++++++++.|+++++.
T Consensus 343 ~~----~~~lRls~~---~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 343 HT----GGGLRITIG---TPEENQRTLERLQAALTQ 371 (374)
T ss_pred eC----CCeEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 32 478999986 357788888888877543
No 460
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.49 E-value=4.2e-12 Score=147.12 Aligned_cols=156 Identities=19% Similarity=0.188 Sum_probs=117.2
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH----HHHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~----~~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|+.+..++++++. . ++++||++...|+... ..+...|++++.++.
T Consensus 59 ~~~le~~lA~l~g~~~~-v~~~sG~~Ai~~al~~l~----~----~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 59 TDVLEQRIAALEGGVAA-LAVASGQAAITYAILNLA----Q----AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh----C----CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 35788999999998654 556777766655544332 2 4578998877654322 225678999999985
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ |+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|..+|+|+++
T Consensus 130 ~-----d~~~l~~~l~---~~t~~V~le~p~NPtg~v~-dl~~I~~la~~~~i~livD~t~~~--~~~~~~l~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID---ENTKAVFAETIGNPAINVP-DIEAIAEVAHAHGVPLIVDNTFAT--PYLCRPIDHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCch--hhcCCchhcCCeEEE
Confidence 3 8999999996 78999999998 5788887 899999999999999999998642 234566678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK 701 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~ 701 (946)
.|++|+|+. .|..+|.+.++.
T Consensus 199 ~S~sK~l~g----~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGG----HGTAIGGVIVDG 219 (418)
T ss_pred ECccccccC----CccceEEEEEec
Confidence 999999852 244577766653
No 461
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.49 E-value=1.3e-11 Score=146.03 Aligned_cols=314 Identities=15% Similarity=0.117 Sum_probs=180.9
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+|..++...+.+++.+..|.+ ...+..++|++. +..++++.+.. .++|+|+++...+..+...++..|.+++
T Consensus 115 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~--al~~~~~~l~~----~~gD~Vlv~~P~y~~y~~~~~~~g~~~v 188 (481)
T PTZ00377 115 AGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASS--GIKLLLQLLIG----DPSDGVMIPIPQYPLYSAAITLLGGKQV 188 (481)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHH--HHHHHHHHhcc----CCCCEEEECCCCchhHHHHHHHcCCEEE
Confidence 576666666667776655654 334555555542 22233333321 2468999999988777778899999999
Q ss_pred EEcCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccc-cc-cc
Q 002263 594 SVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ-VG 663 (946)
Q Consensus 594 ~v~~~~~--g~~D~e~L~~~i~~~---~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~-~g 663 (946)
.++++++ +.+|+++|+++++.. ..++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++.. .+ .+
T Consensus 189 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~ 268 (481)
T PTZ00377 189 PYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE 268 (481)
T ss_pred EEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC
Confidence 9998754 479999999999631 127888988899 5799986 2499999999999999999998632 11 11
Q ss_pred --ccCC----CccCC------C-EEEeCCCccc-ccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCCC
Q 002263 664 --LTSP----GYIGA------D-VCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 664 --l~~p----g~~Ga------D-i~~~s~hK~f-~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
+.+. ..+.. . +++.++.|+| ++ .|.++|++.+ ++++.+.+-.. +.
T Consensus 269 ~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~----~GlRiG~~~~~~~p~~li~~l~~~--------------~~ 330 (481)
T PTZ00377 269 KPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGE----CGRRGGYFELTNIPPEVREQIYKL--------------AS 330 (481)
T ss_pred CCcccHHHHHHhhcccccCCeEEEEEecCCcccccC----CcCceEEEEEeCCCHHHHHHHHHH--------------hh
Confidence 1110 01111 1 3456788974 43 3789999987 55554433110 00
Q ss_pred CCCcccCccchhhHHHHHHHHHHH--HcHh---hH----HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEec
Q 002263 727 LGTIAAAPWGSALILPISYTYIAM--MGSK---GL----TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDL 797 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~--lG~e---Gl----~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~ 797 (946)
...+++..++. ++.+++.. .+.. .+ ++..+...++.+++.+.|+++..+.+..+++.++ +++++
T Consensus 331 -~~~~~~~~~Q~----a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~f--l~~~~ 403 (481)
T PTZ00377 331 -INLCSNVVGQL----MTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMY--AFPRI 403 (481)
T ss_pred -eecCCChHHHH----HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEE--EEeec
Confidence 11122211121 12222211 0111 11 1111223456677888887652232223333232 23333
Q ss_pred c--c-ccc---cCCC-CHHHHH-HHHHHCCccc-CCCCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 798 R--G-LKN---TAGI-EPEDVA-KRLMDYGFHG-PTMSWP---VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 798 ~--~-~~~---~~g~-~~~~i~-~~L~~~Gi~~-~~~~~p---~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+ . ... ..+. +..+++ +.|.++|+.+ +...|. ..+++|+++. .+.+++++.++.|.+++++..+
T Consensus 404 ~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 404 ELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred cCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 2 0 000 0011 123344 4455789874 433342 2358999997 5678999999999988876554
No 462
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.49 E-value=9.6e-12 Score=146.75 Aligned_cols=308 Identities=15% Similarity=0.223 Sum_probs=182.0
Q ss_pred cccHHHHHHHHHHHHHHhhC----CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH-HcC
Q 002263 515 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 589 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G----~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~-~~G 589 (946)
.+|..++...+.+++.+..| ++...+..++|+++. ..++++.+. .+++.|+++.+.++.+...+. ..|
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~a--l~~l~~~l~-----~pGD~Vlv~~P~Y~~~~~~~~~~~G 165 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGA--NETIMFCLA-----DPGDVFLIPSPYYAAFDRDLRWRTG 165 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHH--HHHHHHHhC-----CCCCEEEECCCCccchHHHHHhhCC
Confidence 46777777777777777666 455555566666532 223333332 256899999998887777666 589
Q ss_pred CEEEEEcCCC--CCCCCHHHHHHHHHh---cCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc
Q 002263 590 MKIVSVGTDA--KGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 590 ~~vv~v~~~~--~g~~D~e~L~~~i~~---~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~ 661 (946)
++++.|+++. ++.+|++++++++++ ...++++|++++| |.+|.+- +.+++|.++|+++|+++++|.++....
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 9999999963 467999999877532 1357899999999 5799986 248889999999999999999864211
Q ss_pred -cc--ccCC----Ccc-----CCCE--EEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCC
Q 002263 662 -VG--LTSP----GYI-----GADV--CHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 662 -~g--l~~p----g~~-----GaDi--~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
.+ +.+. .+. ..|. ++.+++|+|+.| |-++|+++.. +.+...+.. . ..
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp----GlRvG~li~~~~~l~~~~~~--~------------~~ 307 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP----GFRVGIVYSFNDSVVSCARK--M------------SS 307 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC----cceEEEEEECCHHHHHHHHH--H------------hh
Confidence 11 1110 000 1232 357889998654 7899999985 333222100 0 00
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHcHhh-----HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccc
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMGSKG-----LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL 800 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG~eG-----l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~ 800 (946)
...+++ ....+.+ .++.... +++..++...+.+.+.+.|++. +... .+++..+ ++++++..
T Consensus 308 ~~~vs~-------~~Q~a~~--~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~--~~~aG~f--lwi~l~~~ 374 (496)
T PLN02376 308 FGLVSS-------QTQLMLA--SMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACL--TSNAGLF--AWMDLRHL 374 (496)
T ss_pred cCCCCH-------HHHHHHH--HHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCceEE--EEEEchhh
Confidence 111111 1111111 2222211 2223344445566777888764 3321 2223232 56777532
Q ss_pred ccc-CC-CCHHHHHHHHHH-CCcccC-CCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 801 KNT-AG-IEPEDVAKRLMD-YGFHGP-TMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 801 ~~~-~g-~~~~~i~~~L~~-~Gi~~~-~~~~--p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
... .. .+..++.+.|.+ .|+.+. ...| ..++++||++... ++++++..++.|++++.+-+
T Consensus 375 ~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~-~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 375 LRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANM-DDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred hccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHhh
Confidence 110 00 123578888886 498753 3334 2368999999742 46777777777777765433
No 463
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.49 E-value=7.5e-12 Score=144.39 Aligned_cols=300 Identities=15% Similarity=0.181 Sum_probs=177.2
Q ss_pred ccHHHHHHHHHHHHHHhhCC--CcccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++....+. +...+...+| +++.. .+++.+. .++++|++++..+..+...++..|+++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vli~~p~~~~~~~~~~~~g~~v 144 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALN---VALKAIL-----NPGDEVIVFAPYFVEYRFYVDNHGGKL 144 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHH---HHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 45555555555555544333 3333334444 44432 2233321 256889999988877777788899999
Q ss_pred EEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHH------cCCEEEEecccccc-c
Q 002263 593 VSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHD------NGGQVYMDGANMNA-Q 661 (946)
Q Consensus 593 v~v~~~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~------~g~ll~vD~a~~~a-~ 661 (946)
+.++++++ +.+|+++|+++++ +++++|++++| |.+|.+. ..+++|+++|++ ||+++++|.++... .
T Consensus 145 ~~v~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~ 221 (394)
T PRK06836 145 VVVPTDTDTFQPDLDALEAAIT---PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY 221 (394)
T ss_pred EEEecCCccCcCCHHHHHhhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc
Confidence 99999876 6899999999996 68999999999 4789975 248888889998 89999999986321 1
Q ss_pred ccccCC---CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 662 VGLTSP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 662 ~gl~~p---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
.+-..+ ..+.-.+++.|++|.|+.| |-++|++.+++.+.+... .... ... .....+..+++...+
T Consensus 222 ~~~~~~~~~~~~~~~i~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~--~~~~-~~~----~~~~~~~~~~~~~~q- 289 (394)
T PRK06836 222 DGAEVPYIFKYYDNSIVVYSFSKSLSLP----GERIGYIAVNPEMEDADD--LVAA-LVF----ANRILGFVNAPALMQ- 289 (394)
T ss_pred CCCCCCChHHccCcEEEEecchhhccCc----ceeeEEEecCHHHhhhHH--HHHH-HHH----HhhccccccCCHHHH-
Confidence 110111 1122346778889988543 567999998765432100 0000 000 000001111111111
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
.+.+ ..+. ++.. .+...++.+.+.+.|+++ +.+. .+.+.+ + ++++++ ..+..++.+.|.+
T Consensus 290 ----~~~~--~~l~-~~~~--~~~~~~~r~~l~~~L~~~g~~~~--~~~gg~-~-~~~~~~------~~~~~~~~~~l~~ 350 (394)
T PRK06836 290 ----RVVA--KCLD-ATVD--VSIYKRNRDLLYDGLTELGFECV--KPQGAF-Y-LFPKSP------EEDDVAFCEKAKK 350 (394)
T ss_pred ----HHHH--HHhC-ChHH--HHHHHHHHHHHHHHHHhCCCEee--cCCceE-E-EEEeCC------CCCHHHHHHHHHh
Confidence 1111 1221 1211 123335566777788764 3322 222222 1 334443 1367888899999
Q ss_pred CCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 818 ~Gi~~~-~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+|+.+. ...|..++++||++. .++++++..++.|++++++
T Consensus 351 ~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 351 HNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred CCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 999753 333444689999997 4688888888888887654
No 464
>PRK05839 hypothetical protein; Provisional
Probab=99.49 E-value=4.5e-12 Score=145.18 Aligned_cols=290 Identities=11% Similarity=0.010 Sum_probs=169.6
Q ss_pred cccHHHHHHHHHHHHHHhhCC--CcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 515 AQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
.+|..++...+.+++++..|. +...+..++|++.. ...+++.+... ++++.|+++...+..+...+.+.|+++
T Consensus 59 ~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a--l~~~~~~~~~~---~~gd~vlv~~P~y~~~~~~~~~~g~~v 133 (374)
T PRK05839 59 SAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV--LFNFPQFVLFD---KQNPTIAYPNPFYQIYEGAAIASRAKV 133 (374)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH--HHHHHHHHhcC---CCCCEEEECCCCchhhHHHHHhcCCEE
Confidence 367777777788888888784 45566677776632 22222322111 145789999887777777789999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccccccccCC
Q 002263 593 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 667 (946)
Q Consensus 593 v~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p 667 (946)
+.++.+++ ..+|+++. .+ +++++|++++| |.+|.+- ..+++|+++|+++|+++++|.++..-...-..+
T Consensus 134 ~~v~~~~~~~~~~d~~~~--~~----~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~ 207 (374)
T PRK05839 134 LLMPLTKENDFTPSLNEK--EL----QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPP 207 (374)
T ss_pred EEeecccccCCcCCcchh--hh----ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCC
Confidence 99999754 34555443 23 46889999999 5788875 358889999999999999999864211000011
Q ss_pred --Cc-------cCCC--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 668 --GY-------IGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 668 --g~-------~GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
.. ...| +++.++.|+|+. .|.++|++.+++++...+-.. +.....+++...
T Consensus 208 s~~~~~~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~ii~~~~~~~~~~~~--------------~~~~~~~~~~~~ 269 (374)
T PRK05839 208 SLLEASILVGNESFKNVLVINSISKRSSA----PGLRSGFIAGDASILKKYKAY--------------RTYLGCASPLPL 269 (374)
T ss_pred CHhhhhcccCccccCcEEEEeccccccCC----ccceeEEEecCHHHHHHHHHH--------------HhhcCCCCChHH
Confidence 00 0112 556778888754 478999999877655433110 000011111101
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
+. ++...+ ...+-+++..+....+.+++.+.|. +.. +.+..+ +.++++ +..+++++|.
T Consensus 270 q~----~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~l~----~~~--p~gg~f--i~~~~~--------~~~~~~~~l~ 327 (374)
T PRK05839 270 QK----AAAVAW--LDDEHAEFFRNIYAKNLKLAREILG----ITI--PPATFY--VWLPVD--------NDEEFTKKLY 327 (374)
T ss_pred HH----HHHHHh--ccchHHHHHHHHHHHHHHHHHHhcC----CCC--CCeeEE--EEEeCC--------ChHHHHHHHH
Confidence 11 111111 1122233333333444445554442 111 122222 345543 3468889987
Q ss_pred H-CCcccCCC-CCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 817 D-YGFHGPTM-SWP----VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 817 ~-~Gi~~~~~-~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+ +|+.+... .|. .++++||+++. +.+++.+.++.|++++
T Consensus 328 ~~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 328 QNEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEIIKTYL 372 (374)
T ss_pred HHCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 5 89975422 222 24899999964 5788888888887664
No 465
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.48 E-value=2.3e-12 Score=149.16 Aligned_cols=300 Identities=12% Similarity=0.098 Sum_probs=173.5
Q ss_pred cccHHHHHHHHHHHHHHhhCC--Cccccc---CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcC
Q 002263 515 AQGYQEMFNNLGEWLCTITGF--DSFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 589 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~--~~~~l~---~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G 589 (946)
.+|..++.+.+.+++.+..+. +...+. +.+|+++...++++++.+. .++++|+++++.++.+...+++.|
T Consensus 71 ~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G 145 (404)
T PTZ00376 71 IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-----PAGTTVYVSNPTWPNHVNIFKSAG 145 (404)
T ss_pred CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcC
Confidence 478766666666665443332 222333 3444444444444444432 256899999998888888899999
Q ss_pred CEEEEEcCC--CCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc
Q 002263 590 MKIVSVGTD--AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG 663 (946)
Q Consensus 590 ~~vv~v~~~--~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g 663 (946)
++++.+|.. +++.+|++++++++.++.++++++++.+| |.+|.+- +.+++|+++|++||+++++|.++..-. .+
T Consensus 146 ~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 225 (404)
T PTZ00376 146 LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGD 225 (404)
T ss_pred CceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCC
Confidence 999999983 24789999999999754355677778888 5789884 358899999999999999998753111 11
Q ss_pred c----cCCC---ccCCC-EEEeCCCcccccCCCCCCCcceeEE---EecccCCCCCCCccccCCCCCCCCCCCCCCCccc
Q 002263 664 L----TSPG---YIGAD-VCHLNLHKTFCIPHGGGGPGMGPIG---VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 732 (946)
Q Consensus 664 l----~~pg---~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~---~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~ 732 (946)
. .... ..+-. +++.|+.|+|++| |.++|++. .++++...+-...... ... ...+.
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~----GlRvG~~~~~~~~~~~~~~l~~~~~~~---------~~~-~~~~~ 291 (404)
T PTZ00376 226 LDKDAYAIRLFAERGVEFLVAQSFSKNMGLY----GERIGALHIVCANKEEAANVLSQLKLI---------IRP-MYSSP 291 (404)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCccccc----ccccceEEEEeCCHHHHHHHHHHHHHH---------Hhh-hcCCC
Confidence 0 0000 11112 5567788998755 78999984 3443322111000000 000 00111
Q ss_pred CccchhhHHHHHHHHHHHHcH------hhHHHHHHHHHHHHHHHHHHHhcc-CC--eeeccCCCceeeeEEEeccccccc
Q 002263 733 APWGSALILPISYTYIAMMGS------KGLTEASKIAILNANYMAKRLEKH-YP--ILFRGVNGTVAHEFIVDLRGLKNT 803 (946)
Q Consensus 733 ~~~g~~~~~~~a~a~l~~lG~------eGl~~~~~~~~~~a~~l~~~L~~~-~~--v~~~~~~~~~~~e~v~~~~~~~~~ 803 (946)
+ .....++..++. .+. +-+++..++..++.+.+.+.|++. +. +.+..+++.++ +.+++
T Consensus 292 ~----~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f--~~~~~------ 358 (404)
T PTZ00376 292 P----IHGARIADRILS-DPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMF--SFTGL------ 358 (404)
T ss_pred c----hHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEE--EecCC------
Confidence 1 111111112221 111 113333445567778888888875 22 11111223221 22222
Q ss_pred CCCCHHHHHHHHHHC-CcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 804 AGIEPEDVAKRLMDY-GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 804 ~g~~~~~i~~~L~~~-Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+ .+++++|.++ |+.+. | +. ||+++- .++++++.+++.|++.+.
T Consensus 359 ---~-~~~~~~L~~~~~v~v~----p--~~-Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 359 ---T-KEQVERLIEKYHIYLL----D--NG-RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred ---C-HHHHHHHHHhCCEeec----C--CC-eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 2 4788888876 88753 2 22 888853 578899999999998754
No 466
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.48 E-value=5.8e-12 Score=128.88 Aligned_cols=303 Identities=21% Similarity=0.248 Sum_probs=192.6
Q ss_pred CcHHHHHHHHhCCccccccCCChhhhh-hhHH-----HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccC
Q 002263 68 VPPVILRNIMENPAWYTQYTPYQAEIA-QGRL-----ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG 141 (946)
Q Consensus 68 ~p~~i~~~i~~~~~~~t~~~pyq~e~s-qg~l-----~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~ 141 (946)
+|+.....++ +|...|.-.. .. .|+| ..|..|-..+++++||+. +-.+.|+-.+-.|.+-++. +
T Consensus 29 Lt~eArkal~---E~gDGYSvCD--~C~~Grldei~kPpI~~F~~dlaeFlg~D~--~R~t~GARe~KfavMhal~---~ 98 (382)
T COG1103 29 LTEEARKALL---EWGDGYSVCD--FCLEGRLDEITKPPIKDFLEDLAEFLGMDE--VRVTAGAREAKFAVMHALC---K 98 (382)
T ss_pred CCHHHHHHHH---HhcCCcchhh--hhccCccccccCCcHHHHHHHHHHHhCCce--eeecccchhhHHHHHHHhc---c
Confidence 5666655666 4555553211 11 3444 346678888999999998 6677888766666666654 2
Q ss_pred CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc----------c----ccc-c---CCCEeEEEEEcC-CCceeecc
Q 002263 142 KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------D----IDY-K---SGDVCGVLVQYP-GTEGEVLD 202 (946)
Q Consensus 142 ~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~----------~----l~~-i---~~~t~~v~v~~p-n~~G~i~d 202 (946)
+||-|+++.++|-++.-. |++.|+++..+|-. . +++ . .+.+.+.++|+| ..+|.+.|
T Consensus 99 ~gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D 174 (382)
T COG1103 99 EGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD 174 (382)
T ss_pred CCCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh
Confidence 899999999999776655 45678999887641 1 222 1 134677789999 46999999
Q ss_pred hHHHHHHHHhCCcEEEE-EecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEe
Q 002263 203 YGDFIKNAHANGVKVVM-ATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 279 (946)
Q Consensus 203 i~~i~~~a~~~gal~~v-~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s 279 (946)
.++++++||++|+++++ +|. +.|-++ +..+.|+||+|+|+ |++.. .|| .|+|+.++++.+.+- |..|..
T Consensus 175 akkva~ic~e~gvPlllN~AY--t~Grmpvs~ke~g~DFiVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~-r~Sg~~ 246 (382)
T COG1103 175 AKKVAKICREYGVPLLLNCAY--TVGRMPVSGKEIGADFIVGSGHKSMAA----SAP-IGVLAMSEEWAEIVL-RRSGRA 246 (382)
T ss_pred hHHHHHHHHHcCCceEeecce--eeccccccccccCCCEEEecCccchhc----cCC-eeEEeehhHHHHHHH-hhcccc
Confidence 99999999999999999 443 444432 44689999999999 77743 232 689999998776541 111100
Q ss_pred ecCCCCcceEEecccccccccccccCCCccch--HHHHHHHHHH-HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 002263 280 IDSSGKPALRVAMQTREQHIRRDKATSNICTA--QALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 356 (946)
Q Consensus 280 ~d~~g~~~~~l~l~tre~~irre~aTsni~t~--~~l~a~~aa~-y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~ 356 (946)
..+....| --||. .++.-+||++ +. .+-.+ .++...+.++++.+.|+++||+.
T Consensus 247 ---~~~KEvel----------------lGCT~rGapivTlmASfP~V----~eRVk-rWdeEv~kaR~fv~elEkigg~~ 302 (382)
T COG1103 247 ---FPKKEVEL----------------LGCTVRGAPIVTLMASFPHV----VERVK-RWDEEVEKARWFVAELEKIGGVK 302 (382)
T ss_pred ---cccceeee----------------ecccccCchHHHHHhcCHHH----HHHHH-HHHHHHHHHHHHHHHHHHhhhHH
Confidence 00000111 12443 3455667765 11 22233 34556789999999999997788
Q ss_pred EcCC-CCc-CeEEEecCCHHHHHHHHHHcCCeeee---------ecC---CeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 357 VQGL-PFF-DTVKVKCADAHAIASAAYKIEMNLRV---------VDS---NTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 357 ~~~~-~~~-~~~~i~~~~~~~v~~~L~~~GI~~~~---------~~~---~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++. |.- +-+.|..+.-.+|++.-..+|+++.. +.+ ..+-+| .+.-+.|+++..+++|++
T Consensus 303 qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afke 376 (382)
T COG1103 303 QLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFKE 376 (382)
T ss_pred HhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEE-eecCCHHHHHHHHHHHHH
Confidence 7753 433 33445555445555555555554411 111 234444 345689999999999874
No 467
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.48 E-value=3.7e-12 Score=143.40 Aligned_cols=276 Identities=13% Similarity=0.102 Sum_probs=171.1
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.+|.+...+..++|++.- ..++++. . . ++ .|+++.+.++.+...+++.|++++.+|+++. .
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~~--l~~~~~~-~-~----~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~-~ 112 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTHF--IYRLLSY-I-N----VG-NIIIVEPNFNEYKGYAFTHGIRISALPFNLI-N 112 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHH--HHHHHHH-h-C----CC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCcc-c
Confidence 478899999999998776666776532 2233332 1 1 23 4666677666666678999999999998653 3
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccccc-cccCCC----ccCCCE
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPG----YIGADV 674 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl~~pg----~~GaDi 674 (946)
.|.+.++ + .++++|++++| |.+|.+- +.+++|.++|+++|+++++|.++..-.. +..... ...-=|
T Consensus 113 ~~~~~l~----~--~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi 186 (332)
T PRK06425 113 NNPEILN----N--YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred CcHHHHh----h--cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence 4655443 1 36778999999 4789875 2478888889999999999998632111 100000 111124
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
++.++.|+|++| |.++|++.+++++.+.+... ....+++ . . +..++.....+
T Consensus 187 ~~~SfSK~~~l~----GlRiGy~v~~~~li~~l~~~--------------~~~~~~~------~-~---~~~~l~~~~~~ 238 (332)
T PRK06425 187 IGRSLTKILGIP----SLRIGYIATDDYNMKISRKI--------------TEPWSVC------D-P---AIDFIRSIDLD 238 (332)
T ss_pred EEeecHHhcCCc----hhhheeeecCHHHHHHHHHc--------------CCCCccC------H-H---HHHHHHHhhhH
Confidence 556778888654 78899999987766543210 0001111 1 1 11222222222
Q ss_pred hH-HHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC-CCCCC--C
Q 002263 755 GL-TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-TMSWP--V 829 (946)
Q Consensus 755 Gl-~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~-~~~~p--~ 829 (946)
.+ ++..+....+.+++.+.|++. +.+ +..+.+.+ +.+.++ +..+++++|.++|+.+. ...|+ .
T Consensus 239 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gi~v~~~~~f~~~~ 306 (332)
T PRK06425 239 YVAKHSLDIMENERSYLINNLEAMGFRA-AGDPSANF---ITFMIP--------DAHDFYSYLLKNGILVRLLDDYECLG 306 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEE-CCCCCceE---EEEEcC--------CHHHHHHHHHHCCeEEEECCCCCCCC
Confidence 22 344455556778888888875 333 11122222 344432 46889999999999863 33342 2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 830 PGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 830 ~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
++++||++. +.++.++|+++|++++
T Consensus 307 ~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 307 EQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 468999984 6889999999998764
No 468
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.48 E-value=5.5e-12 Score=141.88 Aligned_cols=272 Identities=17% Similarity=0.142 Sum_probs=168.1
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.+|.+. +..++|++.- ..++++. .++++|+++++.++.+...++..|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~~~--I~it~Gs~~a--l~~~~~~-------~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~---- 116 (330)
T PRK05664 52 DGLEAAARAYYGAPQ--LLPVAGSQAA--IQALPRL-------RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA---- 116 (330)
T ss_pred HHHHHHHHHHhCCCC--EEECcCHHHH--HHHHHHc-------cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----
Confidence 467888999998763 4455565422 2222221 245789999987666677789999999999763
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccccccccCCCcc-CCC--EEE
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VCH 676 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~-GaD--i~~ 676 (946)
++++++ ++++++++++| |.+|.+- .++++|+++|+++|+++++|.++... ........+ ..| +++
T Consensus 117 ----~~~~~~----~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~-~~~~s~~~~~~~~~vi~~ 187 (330)
T PRK05664 117 ----EVEAAL----DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN-TPQHSLAACAHRPGLIVL 187 (330)
T ss_pred ----hHhhhh----cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC-CCcccccccccCCCEEEE
Confidence 455555 35667888899 4788886 24777888889999999999986321 110111111 222 556
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.++.|+|+. .|.++|++.+++++.+.+... +...+++ .....++.+.+.. .+-.
T Consensus 188 ~SfSK~~gl----~GlRiG~~v~~~~l~~~~~~~--------------~~~~~~~------~~~~~~~~~~L~~--~~~~ 241 (330)
T PRK05664 188 RSFGKFFGL----AGARLGFVLAEPALLRALAEL--------------LGPWTVS------GPTRWLAQAALAD--TPWQ 241 (330)
T ss_pred eeccccccC----CCcceEEEEeCHHHHHHHHHh--------------cCCCCCC------HHHHHHHHHHHhC--hHHH
Confidence 678888754 478999999987766543210 0000111 1111112222221 1223
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 002263 757 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 836 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~ 836 (946)
++..+....+.+++.+.|++. .+...+ +..+ -+.+..+ +..++.+.|.++||.+.. |..++++||+
T Consensus 242 ~~~~~~~~~~r~~l~~~L~~~-~~~~~~--~~~~-f~~~~~~--------~~~~~~~~l~~~gi~v~~--f~~~~~iRis 307 (330)
T PRK05664 242 RRQRERLLAASQRLAALLRRH-GLTPAG--GCAL-FQWVRTE--------DAAALHEFLARRGILTRL--FEQPASLRFG 307 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccC--Ccce-EEEEecC--------CHHHHHHHHHHCCeEEEE--CCCCCeEEEE
Confidence 344455556778888888875 221111 2111 1233321 568899999999999853 3335799999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+.. +++++++|.++|+++.+|.
T Consensus 308 ~~~--~~~~~~~l~~al~~~~~~~ 329 (330)
T PRK05664 308 LPA--DEADWARLDQALLAYRKEA 329 (330)
T ss_pred CCC--CHHHHHHHHHHHHHHHhhc
Confidence 864 5788999999999887763
No 469
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=4.4e-12 Score=147.49 Aligned_cols=290 Identities=15% Similarity=0.242 Sum_probs=176.2
Q ss_pred HHHHHHHHHHhh-CCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCE--------
Q 002263 522 FNNLGEWLCTIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-------- 591 (946)
Q Consensus 522 ~~el~~~la~l~-G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~-------- 591 (946)
..++.++|++++ +.+. .++.++|++++++++.++|.|. ++++|| ...+.||....+....|..
T Consensus 92 ~~~la~~L~~~~~~~~~-v~~~~sGseA~e~Aik~a~~~~------g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK00062 92 EVELAELVIELVPSIEM-VRMVNSGTEATMSAIRLARGYT------GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPD 164 (426)
T ss_pred HHHHHHHHHHhCCCCCE-EEEecCHHHHHHHHHHHHHHHh------CCCeEEEEcCccCCchhhhhhccCccccccCCCC
Confidence 347788888876 4544 3567899999988888877652 245565 4677898765443321110
Q ss_pred -----------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEe-CCCccccccc---CHHHHHHHHHHcCCEEEEecc
Q 002263 592 -----------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT-YPSTHGVYEE---GIDEICKIIHDNGGQVYMDGA 656 (946)
Q Consensus 592 -----------vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt-~Pn~~G~~~~---~i~~I~~ia~~~g~ll~vD~a 656 (946)
+..++ ..|++++++.++++.+++++|++. .++..|.+.+ .+++|.++|++||+++++|.+
T Consensus 165 ~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv 239 (426)
T PRK00062 165 SPGVPEDFAKHTLTAP-----YNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEV 239 (426)
T ss_pred CCCCCcccccceEEcC-----CCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 11111 138999999997655688888887 3466787752 289999999999999999998
Q ss_pred cccccccccCCC------ccC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 657 NMNAQVGLTSPG------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 657 ~~~a~~gl~~pg------~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
+. |+ +.+ .+| +|++++ .|.|+ +|..+|.+++++++.+.+... + .....+
T Consensus 240 ~~----G~-r~g~~~~~~~~~~~pDi~~~--gK~l~-----~G~p~ga~~~~~~i~~~~~~~--~---------~~~~~~ 296 (426)
T PRK00062 240 MT----GF-RVALGGAQGYYGVTPDLTTL--GKIIG-----GGLPVGAFGGRREIMEQLAPL--G---------PVYQAG 296 (426)
T ss_pred hh----cc-ccCCccHHHHhCCCcchHhh--hhHhh-----CCCcceeeeEHHHHHHhhccC--C---------Cceecc
Confidence 63 22 112 123 576543 58774 345577788888777665310 0 000001
Q ss_pred CcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccc-
Q 002263 729 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN- 802 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~- 802 (946)
..+ ++...++++.+.|..+..+.+ .++...+.++++++|++. +.+. ..+ .+.++ .+.++.+....
T Consensus 297 T~~----~~p~~~aaa~a~L~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg-~G~~~-~i~l~~~~~~~~ 367 (426)
T PRK00062 297 TLS----GNPLAMAAGLATLKLLKEPGF---YEELEALTKRLAEGLKEAAKKAGIPLTVNR-VGSMF-GLFFTDEPVTNY 367 (426)
T ss_pred cCc----CCHHHHHHHHHHHHHHhcchH---HHHHHHHHHHHHHHHHHHHHHcCCceEEEE-ecceE-EEEEecCCCcch
Confidence 112 345556667778887765533 344456677888887643 2221 222 23322 22232111000
Q ss_pred ---cCC--CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 803 ---TAG--IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 803 ---~~g--~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..+ .....+.+.|.++|+.+....+ +.+++. ..+|++|||+++++|++++.++
T Consensus 368 ~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~---~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 368 ADAKKSDTERFARFFHAMLDEGVYLAPSQF---EAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred hhhccccHHHHHHHHHHHHHCCeEeecCCc---Cceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 000 0135788999999999754432 345554 5689999999999999987653
No 470
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.47 E-value=3.1e-12 Score=146.08 Aligned_cols=258 Identities=22% Similarity=0.193 Sum_probs=161.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH-H---HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-T---AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~-~---a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|+.+.. .++ .. . .++++|+++...|+.... . +...|++++.++.
T Consensus 52 ~~~Le~~lA~l~g~~~~-~~~~sG~aai~-~~~---~~-l----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 52 RAALEELIAVLEGGHAG-FAFGSGMAAIT-AVM---ML-F----SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHH-HHH---HH-h----CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 56789999999998764 44566765442 222 21 1 246889999887763332 2 3457999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 122 -----~d~~~l~~ai~---~~tklV~le~P~NPtg~~~-dl~~I~~la~~~g~~lvvD~a~~~--~~~~~p~~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR---PNTKAIYVETPTNPLLKIT-DIKKISTIAKEKGLLTIVDNTFMT--PYWQSPISLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhhCCeEEE
Confidence 38999999996 78999999999 4689887 899999999999999999988532 223456678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|++|+|+.|-+ --.|++.+++ .+...+.. . + ..++..- ....||. ...|-+-
T Consensus 191 ~S~sK~l~G~~~---~~~G~~v~~~~~l~~~~~~--~----------~-~~~g~~~--------~~~~a~l--~~~~l~t 244 (377)
T PRK07671 191 HSATKYLGGHSD---VVAGLVVVNSPELAEDLHF--V----------Q-NSTGGIL--------GPQDSWL--LLRGLKT 244 (377)
T ss_pred ecCcccccCCcc---ceeEEEEeCcHHHHHHHHH--H----------H-HhhcCCC--------CHHHHHH--HHcCcCh
Confidence 999999852211 1245666653 34332210 0 0 0011110 0112333 3334444
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 002263 756 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 835 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri 835 (946)
+..+.++...++..+++.|++...+.. +..+.+. .....+++++.+ .|+ ++.+-|
T Consensus 245 l~~R~~~~~~na~~la~~L~~~~~v~~------------v~~p~l~---~~~~~~~~~~~~-~g~---------g~~~s~ 299 (377)
T PRK07671 245 LGIRMEEHETNSRAIAEFLNNHPAVNK------------VYYPGLP---SHPNHELAKEQA-NGF---------GGMISF 299 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeE------------EECCCCC---CCccHHHHHhhC-CCC---------CceEEE
Confidence 555667777999999999987533210 1112111 123345666543 221 243444
Q ss_pred EcCCCCCHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALI 854 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~ 854 (946)
.+ .++++..+|++.|+
T Consensus 300 ~~---~~~~~~~~f~~~l~ 315 (377)
T PRK07671 300 DV---GSEETANKVLERLQ 315 (377)
T ss_pred Ee---CCHHHHHHHHHhCC
Confidence 44 35788888888885
No 471
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.47 E-value=3.9e-12 Score=144.80 Aligned_cols=218 Identities=17% Similarity=0.133 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~ 596 (946)
....+++.++.+-|.+.. +...+|..|..++++++. +++|+||++...++.+.. .+...|++++.++
T Consensus 65 t~~~Le~~la~le~~~~~-v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 65 TTDALCKAIDALEGSAGT-ILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred HHHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 345678888888876543 445557665544443331 256899999887766553 2567899999986
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
.+ +.++++++++ ++|++|++++| |+++.+. ||++|+++||++|++++||++.. ...+.+|-++|+|++
T Consensus 136 ~~-----~~e~l~~al~---~~TklV~lesPsNP~l~v~-dl~~I~~la~~~g~~vvVD~t~a--~p~~~~pl~~GaDiv 204 (395)
T PRK05967 136 PE-----IGAGIAKLMR---PNTKVVHTEAPGSNTFEMQ-DIPAIAEAAHRHGAIVMMDNTWA--TPLYFRPLDFGVDIS 204 (395)
T ss_pred CC-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHhCCEEEEECCcc--CceecChhHcCCCEE
Confidence 42 4578999996 78999999998 5678877 89999999999999999998753 234568999999999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+.|+.|+++ |.|.--+|+++.++++...+-. . + +.++. +.++ - -+|+...|-+-
T Consensus 205 v~S~tKy~~---Gh~d~~~G~v~~~~~~~~~l~~-~-----------~-~~~G~-~~~p-------~--da~l~~rgl~T 258 (395)
T PRK05967 205 IHAATKYPS---GHSDILLGTVSANEKCWPQLLE-A-----------H-GTLGL-CAGP-------D--DTYQILRGLRT 258 (395)
T ss_pred EEecccccC---CCCCeeEEEEEcCHHHHHHHHH-H-----------H-HHcCC-CCCH-------H--HHHHHHcCccc
Confidence 999999863 2222336666665543322210 0 0 00111 1111 1 23455566666
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 002263 756 LTEASKIAILNANYMAKRLEKHY---PILFRG 784 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~---~v~~~~ 784 (946)
+.-+.++..++|..+++.|+++. .|.|++
T Consensus 259 l~lR~~~~~~na~~lA~~L~~hp~v~~V~yPg 290 (395)
T PRK05967 259 MGIRLEHHRKSALEIARWLEGRPDVARVLHPA 290 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcEEECCC
Confidence 77778888999999999999862 445655
No 472
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.46 E-value=7.3e-12 Score=142.33 Aligned_cols=281 Identities=15% Similarity=0.142 Sum_probs=173.8
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC--
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-- 600 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~-- 600 (946)
.++++.+++.++++..++..++|++. +...+++.+ . + +.|+++...++.+...+...|++++.++.+.+
T Consensus 57 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~~--~----~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~ 127 (354)
T PRK06358 57 LELRKRIASFEQLDLENVILGNGATE--LIFNIVKVT--K----P-KKVLILAPTFAEYERALKAFDAEIEYAELTEETN 127 (354)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHH--HHHHHHHHh--C----C-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccC
Confidence 46788888888988777666667652 222333432 1 2 46888888766666678889999999998754
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-ccc-cCCC-cc-CCC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSPG-YI-GAD 673 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl-~~pg-~~-GaD 673 (946)
..+| +++.+++. ++++++++++| |.+|.+- +.+++|.++|+++|+++++|.++..-. .+. ..+. .. ..+
T Consensus 128 ~~~d-~~~~~~~~---~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 203 (354)
T PRK06358 128 FAAN-EIVLEEIK---EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFK 203 (354)
T ss_pred CCcc-HHHHHhhc---cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCC
Confidence 3688 66666664 56888889999 5788875 248899999999999999999863111 110 0110 01 112
Q ss_pred --EEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 674 --VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 674 --i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
+++.|+.|+|++| |.++|++.+. +.+...+... .....++ .... ++....
T Consensus 204 ~vi~~~S~SK~~gl~----G~RiG~lv~~~~~~~~~~~~~--------------~~~~~~~------~~~q---~~~~~~ 256 (354)
T PRK06358 204 NLIIIRAFTKFFAIP----GLRLGYGLTSNKNLAEKLLQM--------------REPWSIN------TFAD---LAGQTL 256 (354)
T ss_pred CEEEEEechhhccCc----chhheeeecCCHHHHHHHHHh--------------CCCCcch------HHHH---HHHHHH
Confidence 5567788887644 7899999875 4443332100 0000111 1111 111122
Q ss_pred HcHhh-HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC
Q 002263 751 MGSKG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP 828 (946)
Q Consensus 751 lG~eG-l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p 828 (946)
+..+. +.+..+....+.+++.+.|++...+.+..+.+.+ +++.++ +..+++++|.++||.+.. ..|+
T Consensus 257 l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~ 325 (354)
T PRK06358 257 LDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNF---IFFKLE--------KPIDLRKELLKKGILIRSCSNYR 325 (354)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceE---EEEEcC--------chHHHHHHHHHCCeEEEECCCCC
Confidence 22222 3444555566778888888774222221222322 445543 237899999999998643 3343
Q ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 829 --VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 829 --~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
..+++||++ .++++.++|+++|+++.
T Consensus 326 ~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 GLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred CCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 246899997 46899999999998764
No 473
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.46 E-value=4.6e-12 Score=144.61 Aligned_cols=284 Identities=14% Similarity=0.133 Sum_probs=170.1
Q ss_pred cccHHHHHHHHHHHHHHhhCCC---cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~---~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+..|.+ ...+..++|++..+.. +...+.. .++++|+++...|..+...+.+.|++
T Consensus 61 ~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~--~~~~l~~----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 134 (364)
T PRK07865 61 TAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW--LPTLLGL----GPGDVVVIPELAYPTYEVGARLAGAT 134 (364)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHH--HHHHHcC----CCCCEEEECCCCcccHHHHHHhcCCE
Confidence 3577677777777777766654 4456666666533222 2222211 25688999999888888888999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc-c--
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-L-- 664 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g-l-- 664 (946)
++.++ +++++.. +++++|++++| |.+|.+- ..+++|.++|+++|+++++|.++..- ..+ .
T Consensus 135 ~~~~~-------~~~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 201 (364)
T PRK07865 135 VVRAD-------SLTELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVS 201 (364)
T ss_pred EEecC-------ChhhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCc
Confidence 98875 2233221 57788999999 5788774 24789999999999999999986421 101 0
Q ss_pred -cCC----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 665 -TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 665 -~~p----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
..+ ++..-.+++.|+.|.|+.| |.++|++.+++++...+.... .....+.+...+
T Consensus 202 ~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~q-- 261 (364)
T PRK07865 202 ILDPRVCGGDHTGLLAVHSLSKQSNLA----GYRAGFVAGDPALVAELLEVR--------------KHAGMMVPAPVQ-- 261 (364)
T ss_pred cccccccCCccceEEEEeechhccCCC----ceeeEEEecCHHHHHHHHHHH--------------HhcCCCcCHHHH--
Confidence 001 0111237778899998644 678999988877655432100 000111111111
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
.++..++.. .+-+++..+....+.+++.+.|++. +.+ ..+.+.++ +++.+. .+..++.+.|.++
T Consensus 262 --~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~--~~~~~~-------~~~~~~~~~l~~~ 326 (364)
T PRK07865 262 --AAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRV--DHSEAGLY--LWATRG-------EDCWDTVAWLAER 326 (364)
T ss_pred --HHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcc--cCCCccEE--EEEeCC-------CCHHHHHHHHHHC
Confidence 111122221 2234444455556777888888774 332 12223222 334432 3567888999999
Q ss_pred CcccCC-CCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 819 GFHGPT-MSW-P-VPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 819 Gi~~~~-~~~-p-~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
|+.+.. ..| + .++++||+++. +++++++.++.|+
T Consensus 327 gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 327 GILVAPGDFYGPAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred CEEEeCccccCcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 998632 223 2 35789999874 5788999888774
No 474
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.46 E-value=3.1e-11 Score=138.38 Aligned_cols=266 Identities=18% Similarity=0.232 Sum_probs=166.0
Q ss_pred cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCEEEE------EcCCCCC-CCCHHHHHH
Q 002263 539 SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVS------VGTDAKG-NINIEELRK 610 (946)
Q Consensus 539 ~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~vv~------v~~~~~g-~~D~e~L~~ 610 (946)
.+++++|++++++++..+|.| . ++++|+ +..+.||+...++...|.+... ++..... ..|++++++
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~---~---~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~ 160 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKA---T---GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKA 160 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHh---c---CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHH
Confidence 467788988887777777654 1 345565 4578899877765554432210 0000001 248999999
Q ss_pred HHHhcCCCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCCEEEEecccccccccccCCC---c--cCCCEEEeCCCc
Q 002263 611 AAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---Y--IGADVCHLNLHK 681 (946)
Q Consensus 611 ~i~~~~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg---~--~GaDi~~~s~hK 681 (946)
++. +++++|+++.++ ..|++.++ +++|.++|+++|+++++|+++. .++--..+. . ...|++++ +|
T Consensus 161 ~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~t~--sK 234 (375)
T PRK04260 161 LVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIFTL--AK 234 (375)
T ss_pred hcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEEEe--cc
Confidence 885 678899998774 66887533 8999999999999999999863 222111111 1 23677654 68
Q ss_pred ccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHH
Q 002263 682 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 761 (946)
Q Consensus 682 ~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~ 761 (946)
.|+ +|-.+|++.+++++.+.+... ...+.. .++.+.++++.+.|..+..+++.+
T Consensus 235 ~l~-----~G~~ig~~~~~~~~~~~~~~~--------------~~~~t~----~~~~~~~~aa~a~l~~~~~~~~~~--- 288 (375)
T PRK04260 235 GLA-----NGVPVGAMLAKSSLGGAFGYG--------------SHGSTF----GGNKLSMAAASATLDIMLTAGFLE--- 288 (375)
T ss_pred ccc-----CCcceEEEEEcHHHHhhcCCC--------------CCCCCC----CcCHHHHHHHHHHHHHHHhhHHHH---
Confidence 874 345688999988765544210 001111 234555566777777766555443
Q ss_pred HHHHHHHHHHHHHhcc---CC-e-eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 002263 762 IAILNANYMAKRLEKH---YP-I-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 836 (946)
Q Consensus 762 ~~~~~a~~l~~~L~~~---~~-v-~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~ 836 (946)
+...+.+++++.|.+. +. + ...+ .+.+ +.+++. .+..++.++|.++|+.+.... .+.+|++
T Consensus 289 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~-------~~~~~~~~~l~~~Gi~v~~~~---~~~lR~~ 354 (375)
T PRK04260 289 QALENGNYLQEQLQKALQDKETVTTVRG-LGYM---IGIETT-------ADLSQLVEAARDKGLIVLTAG---TNVIRLL 354 (375)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEec-cceE---EEEEec-------CcHHHHHHHHHhCCCEEecCC---CCEEEEc
Confidence 3334555666666543 21 1 1112 1211 334432 256789999999999874222 3789999
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALISI 856 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~~i 856 (946)
++...|++|++++++.|+++
T Consensus 355 ~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 355 PPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred CCCccCHHHHHHHHHHHHHh
Confidence 99999999999999999765
No 475
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.46 E-value=1e-12 Score=151.23 Aligned_cols=210 Identities=18% Similarity=0.160 Sum_probs=143.5
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+ +..++|..+..++++++. .++++||++...|+.... .+...|++++.++.
T Consensus 72 ~~~le~~lA~l~g~~~a-l~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 72 VSMFEERLRLIEGAEAC-FATASGMSAVFTALGALL--------GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 45788999999998743 566777766644443331 256889998877754432 25668999999975
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+....|.++|+|+++
T Consensus 143 -----~d~~~l~~ai~---~~tklV~~esp~Nptg~v~-dl~~I~~la~~~g~~vivD~a~a--~~~~~~~~~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS---VPTQAVFFETPSNPMQSLV-DIAAVSELAHAAGAKVVLDNVFA--TPLLQRGLPLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCC--ccccCChhhcCCcEEE
Confidence 38999999997 789999999995 789887 89999999999999999999864 2223456678999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCC-CCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~-~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|++|+|+. | |..-.|++++++.... .+.. .. ...+. +.+ . ..||. ..-|-+-
T Consensus 212 ~S~tK~l~g-~--g~~~gG~v~~~~~~~~~~l~~-~~------------~~~g~-~~s----~---~~a~l--~l~~L~t 265 (403)
T PRK07810 212 YSGTKHIDG-Q--GRVLGGAILGDREYIDGPVQK-LM------------RHTGP-ALS----A---FNAWV--LLKGLET 265 (403)
T ss_pred ccCCceecC-C--cCceeEEEEeChHHHHHHHHH-HH------------HHhCC-CCC----H---HHHHH--HHhccCc
Confidence 999999852 1 1111477877765332 1110 00 00010 111 1 12333 3334445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 002263 756 LTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~ 777 (946)
+..+.++..+++.++++.|+++
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 6667777888999999999875
No 476
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=8.2e-12 Score=143.67 Aligned_cols=144 Identities=13% Similarity=0.073 Sum_probs=112.6
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.++++.|...+ +.+++|..+..++++++. +++|+||++...++..... +...|++++.+..
T Consensus 63 v~~lE~~la~leg~~~a-v~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEGGVGA-VATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 45788999999998764 456777766654544431 2568999988765533333 4668999999854
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.+|+++++++|+ ++|++|+++.| |.++.+. |+++|+++||++|+++++|.+. +...+.+|-+.|+||++
T Consensus 134 ----~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~-Di~~I~~iA~~~gi~livD~T~--~tP~~~~pl~~GADIvv 203 (432)
T PRK06702 134 ----NLTADEIVALAN---DKTKLVYAESLGNPAMNVL-NFKEFSDAAKELEVPFIVDNTL--ATPYLCQAFEHGANIIV 203 (432)
T ss_pred ----CCCHHHHHHhCC---cCCeEEEEEcCCCcccccc-CHHHHHHHHHHcCCEEEEECCC--CchhhCChhhcCCCEEE
Confidence 479999999997 89999999999 5677777 7999999999999999999863 23345678889999999
Q ss_pred eCCCcccc
Q 002263 677 LNLHKTFC 684 (946)
Q Consensus 677 ~s~hK~f~ 684 (946)
.|+.|+++
T Consensus 204 ~S~TKy~~ 211 (432)
T PRK06702 204 HSTTKYID 211 (432)
T ss_pred EccccccC
Confidence 99999986
No 477
>PRK06460 hypothetical protein; Provisional
Probab=99.45 E-value=5.3e-12 Score=144.19 Aligned_cols=260 Identities=18% Similarity=0.178 Sum_probs=161.7
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-CCH---HHHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg-~~~---~~a~~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|.++..+++ +.+. +++++|+++.+.++ ++. ..+...|++++.++.
T Consensus 47 ~~~L~~~lA~l~g~~~~-v~~~sG~~ai~~~l---~al~-----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~ 117 (376)
T PRK06460 47 VLELTKKIVELENAEMG-VAFSSGMGAISTTA---LALL-----KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNP 117 (376)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHH---HHHh-----CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence 45788999999998754 34466665543333 3321 25688999876553 332 346778999998876
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
+ +.+.+++.++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....+..+|+|+++
T Consensus 118 ~-----~~~~l~~~~~---~~tklV~l~sp~NPtG~v~-d~~~I~~la~~~g~~vivDea~~~~--~~~~~l~~~~divv 186 (376)
T PRK06460 118 G-----SDNIIEKAKS---KRYDVVFVENITNPLLRVV-DITELSKVCKENGSILIVDATFSTP--INQKPLELGADIVV 186 (376)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCcCcc--ccCChhhcCCCEEE
Confidence 4 2344555443 68999999999 5789988 7999999999999999999986422 12334457899999
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.+++|+|+ |.++..+|+++.++++.+.+... + .. .+++.+ . ..+| +...|.+-+
T Consensus 187 ~S~sK~l~---G~~~~~~G~~~~~~~l~~~l~~~------------~-~~-~g~~~~----~---~~a~--~~l~~~~~l 240 (376)
T PRK06460 187 HSASKFLA---GHNDVIAGLAAGYGKLLNVIDQM------------R-RT-LGTSLD----P---HAAY--LTLRGIKTL 240 (376)
T ss_pred eecceecc---CCCCceEEEEecCHHHHHHHHHH------------H-Hh-cCCCCC----H---HHHH--HHHhchhhH
Confidence 99999984 22233478888776655433200 0 00 011111 1 1233 333455666
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 002263 757 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 836 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~ 836 (946)
..+.++..+++.++++.|+++..+.. +..+.+. +....+++++.. .|+ ++-+-|.
T Consensus 241 ~~r~~~~~~n~~~l~~~L~~~p~v~~------------v~yp~l~---~~p~~~~~~~~~-~g~---------gg~~s~~ 295 (376)
T PRK06460 241 KIRMDVINRNAEQIAEFLEGHPKVVK------------VYYPGLK---SHVDYEIARRVL-KGF---------GGVLSFE 295 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccE------------EECCCCC---CCccHHHHHhhC-CCC---------ceEEEEE
Confidence 77778888999999999987632210 1122111 123457777754 221 2333333
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALI 854 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~ 854 (946)
+ ..+.+++.+|++.|+
T Consensus 296 ~--~~~~~~~~~~~~~l~ 311 (376)
T PRK06460 296 V--NGGQESALKVMKSLK 311 (376)
T ss_pred E--cCcHHHHHHHHHhCC
Confidence 3 335677888888775
No 478
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.45 E-value=4.7e-12 Score=144.36 Aligned_cols=281 Identities=18% Similarity=0.181 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
.+.+|++.+++++|.+. +..+++||+|..+++.++.+. +||+|++|...++++..++.. .|.+++++|++
T Consensus 26 ~~~~fE~~~a~~~g~~~--~~~~~sgt~Al~~al~~l~~~--~gdeVi~p~~t~~~~~~ai~~----~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKY--AVAVSSGTSALHLALRALGLG--PGDEVIVPAYTFPATASAILW----AGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSE--EEEESSHHHHHHHHHHHTTGG--TTSEEEEESSS-THHHHHHHH----TT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCe--EEEeCChhHHHHHHHHhcCCC--cCceEecCCCcchHHHHHHHH----hccEEEEEeccCC
Confidence 35678899999999664 889999999999999888765 899999999999999998753 69999998874
Q ss_pred -------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCC---CCCCCccceEEEecc--
Q 002263 178 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KPPGELGADIVVGSA-- 244 (946)
Q Consensus 178 -------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l---~~~~~~GaDi~v~s~-- 244 (946)
++++ ++++|++|++++ +.|...|+++|.++|+++|+.++-++ .+++|.. ...|.+| |+.++|.
T Consensus 98 ~~~id~~~~~~~i~~~t~ai~~~h--~~G~~~d~~~i~~~~~~~~i~lIeD~-a~a~g~~~~g~~~G~~g-d~~~fSf~~ 173 (363)
T PF01041_consen 98 TLNIDPEALEKAITPKTKAILVVH--LFGNPADMDAIRAIARKHGIPLIEDA-AQAFGARYKGRPVGSFG-DIAIFSFHP 173 (363)
T ss_dssp TSSB-HHHHHHHHHTTEEEEEEE---GGGB---HHHHHHHHHHTT-EEEEE--TTTTT-EETTEETTSSS-SEEEEESST
T ss_pred cCCcCHHHHHHHhccCccEEEEec--CCCCcccHHHHHHHHHHcCCcEEEcc-ccccCceeCCEeccCCC-CceEecCCC
Confidence 4555 788999999987 89999999999999999999999843 3455542 2346666 9999996
Q ss_pred -ccccccCCCCCCceEEEEEch-hhhhcCCC-ceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 245 -QRFGVPMGYGGPHAAFLATSQ-EYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 245 -k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~-~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|.+. .| ..|++.+++ ++.+++.- +-.|...+ ....|.- +. . . ..|.- .+.+ .|++
T Consensus 174 ~K~i~----~g--eGG~v~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~------~~--~-~-g~n~r-m~~~---~AAi 231 (363)
T PF01041_consen 174 TKIIT----TG--EGGAVVTNDPELAERARALRNHGRSRD--AFRRYRH------EL--P-P-GYNFR-MSEL---QAAI 231 (363)
T ss_dssp TSSS-----SS--S-EEEEESTHHHHHHHHHHTBTTEETS--ECSTTEE------SS--S-S---B-B--BHH---HHHH
T ss_pred CCCCc----CC--CCeeEEecHHHHHHHhhhhhccCcCcc--ccccccc------cc--c-C-Ccccc-cHHH---HHHH
Confidence 4442 22 347888876 33333210 01111100 0000000 00 0 0 01110 0122 2232
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---C---CcCeEEEecCC-----HHHHHHHHHHcCCeeeee
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---P---FFDTVKVKCAD-----AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~---~~~~~~i~~~~-----~~~v~~~L~~~GI~~~~~ 390 (946)
-+..+ +-++++.++-.++++++.+.|.++.++..... . ....+.+.+++ -.++.+.|.++||..+..
T Consensus 232 gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~ 309 (363)
T PF01041_consen 232 GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPH 309 (363)
T ss_dssp HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCS
T ss_pred HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCccccc
Confidence 11222 23566666667899999999999854755421 1 12234454442 578999999999965310
Q ss_pred ----------------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 ----------------------------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 ----------------------------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
....+.+-++..-+++|+++++++|+
T Consensus 310 ~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 310 YPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 01347777888889999999998874
No 479
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=1.8e-11 Score=141.72 Aligned_cols=143 Identities=16% Similarity=0.137 Sum_probs=106.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-HH---HcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AA---MCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-a~---~~G~~vv~v~~ 597 (946)
..++++.++++.|.+.. +..++|.++..++++++. . ++++|+++...++..... .. ..|+++..++.
T Consensus 60 ~~~Le~~lA~l~g~~~~-l~~ssG~~Ai~~al~al~----~----~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 60 NDVLEQRVAALEGGVGA-LAVASGMAAITYAIQTIA----E----AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred HHHHHHHHHHHhCCCce-eEehhHHHHHHHHHHHHh----C----CCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 34788999999996643 455677766544443332 2 457888887665533333 22 25777777764
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|.++|+|+++
T Consensus 131 -----~d~e~le~ai~---~~tklV~lesp~NPtG~v~-dl~~I~~la~~~~i~vVvD~a~a~--~~~~~p~~~gaDivv 199 (425)
T PRK06084 131 -----DDIAALEALID---ERTKAVFCESIGNPAGNII-DIQALADAAHRHGVPLIVDNTVAT--PVLCRPFEHGADIVV 199 (425)
T ss_pred -----CCHHHHHHHhc---cCCcEEEEeCCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--cccCChhhcCCCEEE
Confidence 48999999997 68999999998 6789988 799999999999999999998642 234567778999999
Q ss_pred eCCCcccc
Q 002263 677 LNLHKTFC 684 (946)
Q Consensus 677 ~s~hK~f~ 684 (946)
.|++|+|+
T Consensus 200 ~S~tK~l~ 207 (425)
T PRK06084 200 HSLTKYIG 207 (425)
T ss_pred ECchhccc
Confidence 99999995
No 480
>PRK07908 hypothetical protein; Provisional
Probab=99.45 E-value=2.4e-11 Score=137.90 Aligned_cols=297 Identities=14% Similarity=0.126 Sum_probs=183.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 139 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~ 139 (946)
+.+..+...|+.+.+.+.+...-+..|.+. +| ..++++.+|+.+|.++.++.++.|++.++..++. +.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----~g----~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~---l~ 95 (349)
T PRK07908 28 AVNVRHDTPPEWLRERLAARLGDLAAYPST-----ED----ERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR---LR 95 (349)
T ss_pred cCCCCCCCCCHHHHHHHHHHhhHhhcCCCc-----cc----hHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh---cC
Confidence 344444557777766665433223444332 22 3356788999999999999999999976654333 32
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc---c--cccCCCEeEEEEEcC-CCceeecchHHHHHHHHhC
Q 002263 140 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---I--DYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN 213 (946)
Q Consensus 140 ~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~---l--~~i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~ 213 (946)
+ +.+++. ||++...+.. ++..|++++.+++++ + +.+.++++++++.+| |.+|.+.+.++|.+++++
T Consensus 96 --~-~~viv~---~P~y~~~~~~-~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~- 167 (349)
T PRK07908 96 --P-RRAAVV---HPSFTEPEAA-LRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVLHPAEQLLALRRP- 167 (349)
T ss_pred --C-CeEEEe---CCCChHHHHH-HHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-
Confidence 4 456665 4444444332 345799998887642 1 124567889999888 679999999999999974
Q ss_pred CcEEEEEecCcc---ccCCCCCC--CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcc
Q 002263 214 GVKVVMATDLLA---LTILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 287 (946)
Q Consensus 214 gal~~v~a~~~a---l~~l~~~~--~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~ 287 (946)
+.+++++ +..+ .+...+.. +.+--+++.|. |.|+.| |.-+||+++++++++.+.... .
T Consensus 168 ~~~iIvD-e~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~----GlRiG~~~~~~~~~~~~~~~~----------~- 231 (349)
T PRK07908 168 GRILVVD-EAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLA----GLRVGYALGAPDVLARLTRGR----------A- 231 (349)
T ss_pred CCEEEEE-CcchhhccCCccccccccCCCEEEEeecccccCCc----cceeeeeecCHHHHHHHHhcC----------C-
Confidence 7888883 2221 11111111 12223455565 877533 445799999888776652100 0
Q ss_pred eEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEE
Q 002263 288 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVK 367 (946)
Q Consensus 288 ~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~ 367 (946)
..++++.+ ..++ ++ ++.-.+.+-++++.++..++.+++.+.|+++| +++..++...-+.
T Consensus 232 -----------------~~~~~~~~-~~a~-~~-~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~ 290 (349)
T PRK07908 232 -----------------HWPVGTLQ-LEAI-AA-CCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVL 290 (349)
T ss_pred -----------------CCCccHHH-HHHH-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEE
Confidence 01122111 1111 11 11111123456777888888899999999886 8876432222344
Q ss_pred EecCCHHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 368 VKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 368 i~~~~~~~v~~~L~~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++.++..++.+.|+++||.++.- .++.+|+|+. +.+|+++|+++|+
T Consensus 291 ~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~---~~~~~~~l~~al~ 342 (349)
T PRK07908 291 VRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR---PRAEVPVLVQALA 342 (349)
T ss_pred EECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC---CCccHHHHHHHHH
Confidence 55555678889999999988642 2578999994 7889999999886
No 481
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.45 E-value=3.7e-11 Score=136.43 Aligned_cols=299 Identities=15% Similarity=0.122 Sum_probs=186.6
Q ss_pred cCCCCCCCCCcHHHHHHHHhCC--ccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHh
Q 002263 59 IGMGYYNTHVPPVILRNIMENP--AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~--~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~ 136 (946)
++.|-.+...|+.+.+.+.+.- ..+.. |.++ + ..++++.+|++++.++.++.+++|+++++..++.++
T Consensus 27 l~~~~~~~~~p~~~~~a~~~~~~~~~~~~---y~~~---~----~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 27 MDANETPFELPEEVIKNIQEIVKSSQVNI---YPDP---T----AEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhhcCcccC---CCCc---c----HHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh
Confidence 4555556668887776655321 12233 3322 1 245778999999999889989998887766555444
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cC-CCEeEEEEEcC-CCceeecchHH
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KS-GDVCGVLVQYP-GTEGEVLDYGD 205 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~-~~t~~v~v~~p-n~~G~i~di~~ 205 (946)
.. +||+|+++.-.++.....+ +..|.+++.++.+ ++++ ++ .++++|++++| |.+|.+.+.++
T Consensus 97 -~~--~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~ 169 (351)
T PRK14807 97 -IN--KGDVVIYPHPSFAMYSVYS----KIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERED 169 (351)
T ss_pred -cC--CCCEEEEeCCChHHHHHHH----HHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHH
Confidence 23 8999999988877554443 3468888777653 3334 54 37899999998 68999999999
Q ss_pred HHHHHHhCCcEEEEEecCccc-cC-CCC-CCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeec
Q 002263 206 FIKNAHANGVKVVMATDLLAL-TI-LKP-PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 281 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al-~~-l~~-~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d 281 (946)
+.+++++++.+++++.....+ +. ..+ .....--|+++|. |.|+.| |=-+|++...+++.+.+-.
T Consensus 170 l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~----GlRiG~~v~~~~~~~~~~~-------- 237 (351)
T PRK14807 170 IIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLA----GLRVGYAVANENILKYLNL-------- 237 (351)
T ss_pred HHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccc----hhceeeeecCHHHHHHHHH--------
Confidence 999999988887774322111 10 000 1122234677776 888643 2246888877776655410
Q ss_pred CCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC
Q 002263 282 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 361 (946)
Q Consensus 282 ~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~ 361 (946)
.+...+++ .+ +..++. .++....+++..++..++.+++.+.|+++.|+++....
T Consensus 238 --------------------~~~~~~~~---~~-~q~~~~--~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~ 291 (351)
T PRK14807 238 --------------------VKSPYNIN---SL-SQVIAL--KVLRTGVLKERVNYILNERERLIKELSKIPGIKVYPSK 291 (351)
T ss_pred --------------------ccCCCCcC---HH-HHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCC
Confidence 00011111 11 111111 12222235555566677778888889877337765321
Q ss_pred CcCeEEEecCCHHHHHHHHHHcCCeeeeec-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 362 FFDTVKVKCADAHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 362 ~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~-----~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..-+.+.+++..++.+.|.++||.++... ++.+|+++. +.++.++|+++|.
T Consensus 292 -~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~ 347 (351)
T PRK14807 292 -TNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLK 347 (351)
T ss_pred -ccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHH
Confidence 11233555557789999999999886532 467999987 6788889988885
No 482
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.45 E-value=1.5e-11 Score=142.68 Aligned_cols=357 Identities=16% Similarity=0.172 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccc---cCccc---cccCCCCcccccccHHHHHHHHHHHHHH
Q 002263 458 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPV---TWPSF---ANIHPFAPADQAQGYQEMFNNLGEWLCT 531 (946)
Q Consensus 458 e~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~---~~~~f---~~~~p~~p~e~~qG~~~~~~el~~~la~ 531 (946)
-.++.+++.++..+.. ...++.|+.+.+..++....... ...+. ....-|.| .+|..++...+.+++.+
T Consensus 17 ~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~LR~aia~~~~~ 91 (409)
T PRK07590 17 FPEIARRVNAFREANP--EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP---EQGYDFLREKIAENDYQ 91 (409)
T ss_pred HHHHHHHHHHHhhhcC--CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC---CCCCHHHHHHHHHHHHH
Confidence 4577787887776542 22467788877765443321110 00110 01122323 36766666666666555
Q ss_pred hhCC--CcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE-----------EEEEcCC
Q 002263 532 ITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK-----------IVSVGTD 598 (946)
Q Consensus 532 l~G~--~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~-----------vv~v~~~ 598 (946)
..|+ +..++..++|++.-+..+ . ... .++++|+++++.+..+...+.+.|.+ ++.++++
T Consensus 92 ~~g~~~~~~~I~it~Ga~~al~~l--~-~~~-----~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 163 (409)
T PRK07590 92 ARGCDISADEIFISDGAKCDTGNI--L-DIF-----GPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCT 163 (409)
T ss_pred hcCCcCChhhEEECCCHHHHHHHH--H-Hhc-----CCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecc
Confidence 5554 444566666665322222 2 211 24688999999888888889999987 8899987
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-ccc-cCC-Ccc-C
Q 002263 599 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSP-GYI-G 671 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl-~~p-g~~-G 671 (946)
+++...++ +. .+++++|++++| |.+|.+- +.+++|+++|+++|++++.|.++..-. .+- ..+ ..+ +
T Consensus 164 ~~~~~~~d-----~~--~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ 236 (409)
T PRK07590 164 AENNFVPE-----LP--EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEG 236 (409)
T ss_pred cccCCccc-----Cc--ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCC
Confidence 54322222 11 157888999999 5789885 258889999999999999999864211 111 111 111 2
Q ss_pred C-C--EEEeCCCcccccCCCCCCCcceeEEEecccCCCCC-CCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHH
Q 002263 672 A-D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 672 a-D--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp-~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
. + |++.|+.|+|++| |.++|++.+++++.+.+. +........+ .........+.+...+ .++...
T Consensus 237 ~~~~vi~~~SfSK~~~~p----GlRiG~~i~~~~li~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~q----~a~~~~ 305 (409)
T PRK07590 237 ARECAIEFRSFSKTAGFT----GTRCAYTVVPKELKGKTSDGEGVSLNSLW---NRRQSTKFNGVSYIVQ----RAAEAV 305 (409)
T ss_pred cccceEEEecCccccCCc----CceeEEEEcCHHHhhhccccchhhhHHHH---HHHHhhcccCcCHHHH----HHHHHH
Confidence 1 2 4567788988644 788999999887765321 0000000000 0000000001111111 111111
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCccc-CC
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG-PT 824 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~-~~ 824 (946)
+..-+.+-+++..+....+.+++.+.|++. +.+ +.+ .+.. -++++++. +.+..+++++|. ++|+.+ +.
T Consensus 306 l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~-~g~~--f~wi~~~~-----~~~~~~~~~~l~~~~gv~v~pg 376 (409)
T PRK07590 306 YSPEGKAQIKELIDYYMENAKIIREGLESAGFEV-YGG-VNAP--YIWVKTPD-----GMSSWDFFDKLLQEANVVGTPG 376 (409)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCce-ecC-Ccce--EEEEECCC-----CCCHHHHHHHHHHHCCEEEeCh
Confidence 211123334444555556777888888875 332 222 1212 24567652 356788888877 569875 33
Q ss_pred CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 825 MSWP--VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 825 ~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
..|. ..+++||+.. .+++++++.++.|.++
T Consensus 377 ~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 377 SGFGPSGEGYFRLSAF--GSRENVLEAMERIKKA 408 (409)
T ss_pred hHhCCCCCCEEEEEcc--CCHHHHHHHHHHHHhh
Confidence 2332 2468999953 4678888888887654
No 483
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.44 E-value=1.5e-11 Score=138.80 Aligned_cols=273 Identities=16% Similarity=0.116 Sum_probs=165.9
Q ss_pred HHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++++++.+|++. ..+..++|++..+..+ .+.+ . +++ |+++...++.+...+++.|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l--~~~~--~----~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL--PALL--P----RGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH--HHhc--C----CCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--
Confidence 478899999999974 4666666765322222 2221 1 334 78887766666666889999999988743
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccccccccccCCCcc-CCC--EE
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VC 675 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~-GaD--i~ 675 (946)
+. +. +.++.+++++|| .+|.+-+ .+++|++.|.+++.++++|.++.. +........+ ..+ ++
T Consensus 125 ----~~----~~---~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~-~~~~~s~~~~~~~~~vi~ 192 (339)
T PRK06959 125 ----DT----LP---AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFAD-TLPAASLAAHTDRPGLVV 192 (339)
T ss_pred ----hh----cc---ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-CCCcccchhccCCCCEEE
Confidence 21 22 345678999994 7999861 355555556778999999998642 1110010111 122 55
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+.++.|.|++ .|.++|++++++++.+.+... +...+++ .....++.++|.. .+-
T Consensus 193 l~SfSK~~gl----~GlRiGy~v~~~~li~~l~~~--------------~~~~~vs------~~~q~a~~~~L~~--~~~ 246 (339)
T PRK06959 193 LRSVGKFFGL----AGVRAGFVLAAPALLAALRDA--------------LGAWTVS------GPARHAVRAAFAD--AAW 246 (339)
T ss_pred EecChhhcCC----cchheEEEecCHHHHHHHHHh--------------cCCCCCc------HHHHHHHHHHhCc--HHH
Confidence 5667787754 478899999987766554211 0001121 1111122233321 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 002263 756 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 834 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lr 834 (946)
.++..+....+.+++.+.|++. +.+. . +..+ +.++++ +..++.++|.++||.+..+ +..+++|
T Consensus 247 ~~~~~~~~~~~r~~l~~~L~~~g~~~~-~---~~~f--~~~~~~--------~~~~l~~~l~~~GI~vr~~--~~~~~lR 310 (339)
T PRK06959 247 QAAMRERLAADGARLAALLRAHGFAVH-A---TPLF--SWTDDP--------RAAALHAALARRGIWTRYF--APPPSVR 310 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCcc-C---cceE--EEEeCC--------CHHHHHHHHHhCCeEEEEC--CCCCeEE
Confidence 3344455556778899999875 4432 1 1111 234432 4678999999999998643 3347899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 835 IEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 835 i~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
|+++ .+.+|+++|+++|+++.+.+..
T Consensus 311 isi~--~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 311 FGLP--ADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EECC--CCHHHHHHHHHHHHHHHHHHhh
Confidence 9974 3578999999999998877654
No 484
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=1e-11 Score=140.10 Aligned_cols=272 Identities=18% Similarity=0.244 Sum_probs=169.8
Q ss_pred HHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 602 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~ 602 (946)
.++++.+++.+|.+..++..++|++.- +.++++.+ ++++|+++...++.+...+++.|++++.++.++++.
T Consensus 58 ~~lr~~ia~~~~~~~~~I~~t~G~~~~--l~~~~~~~-------~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (337)
T PRK03967 58 DPLREAIAEFYGLDAENIAVGNGSDEL--ISYLVKLF-------EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFT 128 (337)
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHHH--HHHHHHHh-------CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 457788888888887666666666532 22333322 247899998877666666889999999999987788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCC--CccCCC-EEEeC
Q 002263 603 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGAD-VCHLN 678 (946)
Q Consensus 603 ~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p--g~~GaD-i~~~s 678 (946)
+|++++++++ ++++++++++| |.+|.+- +.++|.++++ +|+++++|.++.. +..-..+ ...... +++.|
T Consensus 129 ~d~~~l~~~~----~~~~~v~~~~P~NPtG~~~-~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S 201 (337)
T PRK03967 129 IDGERIAEKA----KNASAVFICSPNNPTGNLQ-PEEEILKVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRT 201 (337)
T ss_pred cCHHHHHHhc----cCCCEEEEeCCCCCCCCCC-CHHHHHHHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEec
Confidence 9999998865 56778889999 5799988 6899999995 7999999998642 1110000 011112 55577
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
+.|+|++| |-++|++.+++++...+-.. .. ..+.+ .....++...+. ..+-+.+
T Consensus 202 ~SK~~~l~----GlRiG~iv~~~~~i~~~~~~--------------~~--~~~~~----~~~q~~~~~~l~--~~~~~~~ 255 (337)
T PRK03967 202 FSKAFGLA----GIRAGYAIANEEIIDALYRI--------------KP--PFSLN----ILTMKIVRLALD--HYDLIEE 255 (337)
T ss_pred chHhhcch----hhhheeeecCHHHHHHHHhh--------------cC--CCCCC----HHHHHHHHHHHh--CHHHHHH
Confidence 88888644 78899999887665433210 00 11111 111111111221 2222333
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcC
Q 002263 759 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPT 838 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t 838 (946)
..+....+.+.+.+.|.+. .+++ .+.+ +++++ .+.+.|.++|+.+........+++|+++.
T Consensus 256 ~~~~~~~~r~~l~~~L~~~---~~~~-~~~~---~~~~~------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~ 316 (337)
T PRK03967 256 RIDYIIKERERVRRELGEY---AYPS-DANF---LLLKL------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG 316 (337)
T ss_pred HHHHHHHHHHHHHHHhccC---cCCC-CCcE---EEEhH------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC
Confidence 3444556667777777653 1211 1221 23321 26788889998875332112478999975
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 002263 839 ESESKEELDRYCDALISIRE 858 (946)
Q Consensus 839 ~~~t~~eid~~~~aL~~i~~ 858 (946)
+.++.++|+++|+++.+
T Consensus 317 ---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 317 ---KREENDEFIKALKEIKE 333 (337)
T ss_pred ---CHHHHHHHHHHHHHHHH
Confidence 57888999999987654
No 485
>PRK06855 aminotransferase; Validated
Probab=99.44 E-value=2.7e-11 Score=141.28 Aligned_cols=312 Identities=16% Similarity=0.128 Sum_probs=178.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-HHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-a~~~G~~ 591 (946)
.+|..++...+.+++.+..|.+ ...+..++|++.- ..+++. .. .++++|++++..+..+... ....|++
T Consensus 72 ~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a--l~~~~~-l~-----~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~ 143 (433)
T PRK06855 72 TKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA--IAKIYG-LL-----RREARVIGPSPAYSTHSSAEAAHAGYP 143 (433)
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH--HHHHHH-hc-----CCCCeEEEeCCCCchHHHHHHHhcCCe
Confidence 4687777777777777766654 3455555665422 222222 11 2568899998876654433 3356999
Q ss_pred EEEEcCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--
Q 002263 592 IVSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-- 663 (946)
Q Consensus 592 vv~v~~~~-~-g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g-- 663 (946)
++.+++++ + ..+|+++|+++++.+ ++++++++++| |.+|.+- +.+++|+++|+++|++++.|.++..- ..+
T Consensus 144 ~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~ 222 (433)
T PRK06855 144 PVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKK 222 (433)
T ss_pred EEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence 99999874 3 468999999999631 46788888899 5788885 25888999999999999999976311 111
Q ss_pred ccCCCcc---CCCEEEeCCCcccccCCCCCCCcceeEEEec-----ccCCCCCCCccccCCCCCCCCCCCCCCCcccCcc
Q 002263 664 LTSPGYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-----HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 664 l~~pg~~---GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-----~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~ 735 (946)
+.+...+ +--|++.|+.|+|++| |.++|++.+.. .+...+. ... ..+. ...+++..
T Consensus 223 ~~sl~~~~~~~~~I~~~S~SK~~~~p----GlRiG~ii~p~~~~~~~~~~~~~-~~~----------~~~~-~~~~~~~~ 286 (433)
T PRK06855 223 TVPLSEVIGDVPGIALKGISKELPWP----GSRCGWIEVYNADKDEVFKKYIN-SIL----------NAKM-IEVCSTTL 286 (433)
T ss_pred CCCHHHHcCcCCeEEEecCccccCCC----cceEEEEEEeCCchhhHHHHHHH-HHH----------Hhhc-cccCCChH
Confidence 1111111 1226778899998755 78999999742 1111100 000 0000 01121111
Q ss_pred chhhHHHHHHHHHHHHc--HhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEeccccc-c-------cC-
Q 002263 736 GSALILPISYTYIAMMG--SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK-N-------TA- 804 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG--~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~-~-------~~- 804 (946)
.|. ++..++. -+ .+-+++..+....+.+.+.+.|++...+.+..+.+.++ ++++++.-. . ..
T Consensus 287 ~Q~----a~~~~l~-~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~w~~l~~~~~~~~~~~~~~~~ 359 (433)
T PRK06855 287 PQM----AIPRIMS-HPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFY--MTVVFEDGVLNNKQSLPIENP 359 (433)
T ss_pred HHH----HHHHhhc-CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEE--EeeccccccccccccCCcchh
Confidence 111 1112221 12 22344445555567778888887642222222333332 455664200 0 00
Q ss_pred -------------CCCHHHHHHH-HHHCCccc-CCCCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 805 -------------GIEPEDVAKR-LMDYGFHG-PTMSW-PVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 805 -------------g~~~~~i~~~-L~~~Gi~~-~~~~~-p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..+..+++.. +.+.|+.+ |...| +....+||++.. .+.++|++.++.|.+++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 360 EVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred hhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 0124456655 55789863 44334 323469999976 3688899988888887764
No 486
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.44 E-value=3.6e-11 Score=140.29 Aligned_cols=310 Identities=14% Similarity=0.152 Sum_probs=182.4
Q ss_pred cccHHHHHHHHHHHHHHhhC----CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH-HcC
Q 002263 515 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 589 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G----~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~-~~G 589 (946)
.+|..++...+.+++.+.+| ++...+..++|++.. .-++++.+. .++|.|+++.+.++.+...+. ..|
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~a--l~~l~~~l~-----~pGD~Vlv~~P~Y~~f~~~~~~~~g 166 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAA--NELLTFILA-----DPGDALLVPTPYYPGFDRDLRWRTG 166 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHH--HHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCC
Confidence 46777777777777776655 333445555565432 112222221 256899999998887776665 579
Q ss_pred CEEEEEcCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc
Q 002263 590 MKIVSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 590 ~~vv~v~~~~~--g~~D~e~L~~~i~~~---~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~ 661 (946)
++++.|+++.+ +.+|++++++++++. +.++++|++++| |.+|.+- +.+++|.++|+++|+.+++|.++....
T Consensus 167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 99999998743 468999999998631 347899999999 5789875 248999999999999999999864211
Q ss_pred -c--cccCCC----ccC----CC--EEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCC
Q 002263 662 -V--GLTSPG----YIG----AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPL 727 (946)
Q Consensus 662 -~--gl~~pg----~~G----aD--i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~ 727 (946)
. .+.+.. ..+ .+ +++.++.|.|+.| |-++|+++.. +.+...+... ...
T Consensus 247 f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~----GlRvG~ivs~n~~l~~~~~~~--------------~~~ 308 (447)
T PLN02607 247 FSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLP----GFRVGTIYSYNDKVVTTARRM--------------SSF 308 (447)
T ss_pred cCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCC----cceEEEEEEcCHHHHHHHHHH--------------hhc
Confidence 1 111100 111 12 3456788888654 6889999873 3443221100 000
Q ss_pred CCcccCccchhhHHHHHHHHHHHHcHhh-----HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccc
Q 002263 728 GTIAAAPWGSALILPISYTYIAMMGSKG-----LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN 802 (946)
Q Consensus 728 ~~i~~~~~g~~~~~~~a~a~l~~lG~eG-----l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~ 802 (946)
..+++ ....+++ .++.... +.+..++..++.+.+.+.|++. .+.+..+++..+ +.++++....
T Consensus 309 ~~~s~-------~~q~~~~--~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~f--vw~~L~~~~~ 376 (447)
T PLN02607 309 TLVSS-------QTQHLLA--SMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLF--CWMNLSPLLE 376 (447)
T ss_pred CCCCH-------HHHHHHH--HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEE--EEEEchHhhc
Confidence 11111 1111111 2222222 2233344445667788888774 222222233232 4567653211
Q ss_pred -cCCCCHHHHHHHHHH-CCccc-CCCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 803 -TAGIEPEDVAKRLMD-YGFHG-PTMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 803 -~~g~~~~~i~~~L~~-~Gi~~-~~~~~--p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.......++.++|.+ +|+.+ +...| ..++++||+++. .++++++..++.|.+++++-+.
T Consensus 377 ~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 377 TPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred CCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHHh
Confidence 001123467777765 69875 33333 246999999975 2477888888888887765443
No 487
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.43 E-value=8.9e-11 Score=135.44 Aligned_cols=269 Identities=16% Similarity=0.122 Sum_probs=171.1
Q ss_pred HHHHHHHHHh----C--CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 103 NFQTMIADLT----G--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 103 e~q~~la~L~----g--~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
++++.+|+++ | .++.++.+++|++.++..++.++ .. +|++|++++..|+.+...++ ..|++++.++.
T Consensus 72 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~-~~--~gd~vl~~~p~y~~~~~~~~----~~g~~~~~~~~ 144 (393)
T PRK05764 72 ELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMAL-LD--PGDEVIIPAPYWVSYPEMVK----LAGGVPVFVPT 144 (393)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHh-cC--CCCEEEecCCCCcchHHHHH----HcCCEEEEEec
Confidence 4556666665 3 45678889999998877666554 23 78999999999988766643 45888887665
Q ss_pred c----------cccc-cCCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCcc---ccCC--CC-----
Q 002263 177 K----------DIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLA---LTIL--KP----- 231 (946)
Q Consensus 177 ~----------~l~~-i~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~a---l~~l--~~----- 231 (946)
+ ++++ +++++++|++++| |.+|.+. ++++|+++|+++|++++++. ..+ +... .+
T Consensus 145 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~~~ 223 (393)
T PRK05764 145 GEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDE-IYEKLVYDGAEFTSIASLS 223 (393)
T ss_pred CcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEec-cccceeeCCCCcccHHHcC
Confidence 2 3444 5678899999988 6799985 58999999999999999942 211 1100 01
Q ss_pred CCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccc
Q 002263 232 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 310 (946)
Q Consensus 232 ~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t 310 (946)
+...+-+++++|. |.|+.| |..+|++..++++.+.+.... + ..+.+...
T Consensus 224 ~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~~-------------------------~-~~~~~~~~ 273 (393)
T PRK05764 224 PELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKLQ-------------------------S-HSTSNPTS 273 (393)
T ss_pred CCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHHH-------------------------h-hcccCCCh
Confidence 2234567888886 887644 234799988887766551100 0 00111110
Q ss_pred hHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCCCcCeEEEecCC--------HHHHHHHHH
Q 002263 311 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTVKVKCAD--------AHAIASAAY 381 (946)
Q Consensus 311 ~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~--------~~~v~~~L~ 381 (946)
....+.... +. ...+-+++..++..++.+++++.|+++ | +++......--+.+.++. +.++.+.|.
T Consensus 274 -~~q~~~~~~--l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (393)
T PRK05764 274 -IAQYAAVAA--LN-GPQDEVEEMRQAFEERRDLMVDGLNEIPG-LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALL 348 (393)
T ss_pred -HHHHHHHHH--Hc-CChHHHHHHHHHHHHHHHHHHHHHhhCCC-CcccCCCcceEEEEecccccccccCCHHHHHHHHH
Confidence 111111111 11 123456677777788889999999988 6 776532110011222221 367887775
Q ss_pred -HcCCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 382 -KIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 382 -~~GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++||.+..- .++.+|+|+. ++++++++.++.|.
T Consensus 349 ~~~gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~ 386 (393)
T PRK05764 349 EEAGVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIE 386 (393)
T ss_pred HhCCEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHH
Confidence 579987542 1478999987 47999999998886
No 488
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=4.7e-11 Score=128.09 Aligned_cols=320 Identities=14% Similarity=0.116 Sum_probs=186.5
Q ss_pred cCCCCcccccccHHHHHHHHHHHHHHhhCC--Ccc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH
Q 002263 506 IHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP 582 (946)
Q Consensus 506 ~~p~~p~e~~qG~~~~~~el~~~la~l~G~--~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~ 582 (946)
++-|.| ++|.+.+...+.+.+-+-+.. ... .+.+.+-+||.+-++.++. . ++-.||+|.+-++.+.
T Consensus 96 ~N~Yap---s~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA----~----p~aNILlPrPGfp~Y~ 164 (447)
T KOG0259|consen 96 GNGYAP---SVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA----N----PGANILLPRPGFPLYD 164 (447)
T ss_pred CCCcCC---ccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc----C----CCCceecCCCCCchHH
Confidence 566666 678766555444443332221 122 2344444666654444332 2 4557999988655555
Q ss_pred HHHHHcCCEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccc
Q 002263 583 ATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGAN 657 (946)
Q Consensus 583 ~~a~~~G~~vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~ 657 (946)
.-|.+.|++|+....-+ +..+|++.++++++ ++|+|++|.+|+ ..|.+- ..+++|+++|+++|++++.|..+
T Consensus 165 ~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D---ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY 241 (447)
T KOG0259|consen 165 TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD---ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVY 241 (447)
T ss_pred HhhhhcCceeEeecccCcccceechHHHHHhhc---cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhc
Confidence 55889999999998754 57899999999998 899999999995 566553 36999999999999999999875
Q ss_pred c-ccccc--ccCCCccCCCE---EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcc-ccCCCCCCCCCCCCCCCc
Q 002263 658 M-NAQVG--LTSPGYIGADV---CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGIPAPEKSQPLGTI 730 (946)
Q Consensus 658 ~-~a~~g--l~~pg~~GaDi---~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v-~~~~d~~~~~~~~~~~~i 730 (946)
- ..+++ |.+.|.+.-.+ .+++..|.+-+| ||++|.|+..+.---+-....+ +. +....+
T Consensus 242 ~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VP----GWRlGWi~~hD~~gvf~~~~~~q~~----------~~~~~~ 307 (447)
T KOG0259|consen 242 GHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVP----GWRLGWIALHDPRGVFRDTKVVQGI----------KNFLDI 307 (447)
T ss_pred ceeecCCCCccchhhccccCceEeecccccccccC----CceeeeEEEecccccccchHHHHHH----------HHHHhc
Confidence 2 12222 23335554443 345678887777 7999999987653221110000 00 000001
Q ss_pred ccCccchhhHHHHHHHHHHHHcHhh-HHHHHHHHHHHHHHHHHHHhccCCee-eccCCCceeeeEEEecccccccCCCCH
Q 002263 731 AAAPWGSALILPISYTYIAMMGSKG-LTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEP 808 (946)
Q Consensus 731 ~~~~~g~~~~~~~a~a~l~~lG~eG-l~~~~~~~~~~a~~l~~~L~~~~~v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~ 808 (946)
.. |...+...|.=-+..--++. +.........+++...++|+++..+. ...+++-.+--+-+++.-|.. -.+-
T Consensus 308 ~~---~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~--~~dD 382 (447)
T KOG0259|consen 308 IP---GPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPD--IEDD 382 (447)
T ss_pred cC---CccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhcc--cccc
Confidence 00 11222333333332222333 33334444577888889999874443 122333222111122221110 1234
Q ss_pred HHHHHHHH-HCCcc-cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 809 EDVAKRLM-DYGFH-GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 809 ~~i~~~L~-~~Gi~-~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+++.+|. ++.++ .|...|..++++|++++-- .+.++..++.|++..+.-
T Consensus 383 ~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~--~~~leea~~Rik~Fc~RH 434 (447)
T KOG0259|consen 383 VDFCQKLAREESVICLPGQAFGLKNWLRIVITVE--EEMLEEAFSRIKEFCDRH 434 (447)
T ss_pred HHHHHHHhhhcceEEeccccccCCCeEEEEEccC--hHHHHHHHHHHHHHHHhh
Confidence 57888887 45555 5665566679999998743 456777777777765543
No 489
>PRK07505 hypothetical protein; Provisional
Probab=99.43 E-value=5.6e-11 Score=137.53 Aligned_cols=318 Identities=15% Similarity=0.163 Sum_probs=175.6
Q ss_pred CCcceeecCCCCCC-CCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHH
Q 002263 52 NKVYKSFIGMGYYN-THVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAA 129 (946)
Q Consensus 52 n~~~~~~~G~g~~~-~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ 129 (946)
++.+.+|.+.++.+ |.-|.++ +.+.+.-. |. ..+++.+.. ....+.+.++++.+++++|. .+.++.+|+.+.
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~-~A~~~~l~~~g-~~~~~~~~~-~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~ 118 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAII-EGAVDALKRTG-SLHLSSSRT-RVRSQILKDLEEALSELFGA---SVLTFTSCSAAH 118 (402)
T ss_pred CceEEEeecCCccCCCCCHHHH-HHHHHHHHHhC-CCCCCccch-hhhhHHHHHHHHHHHHHhCC---CEEEECChHHHH
Confidence 34466776666666 4555554 34442111 10 001111111 12356778899999999997 355666777677
Q ss_pred HHHH-HHhc-c-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---ccccc-cCCCEeEEEEEcC-CCceeec
Q 002263 130 EAMA-MCNN-I-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-KSGDVCGVLVQYP-GTEGEVL 201 (946)
Q Consensus 130 ea~~-la~~-~-~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l~~-i~~~t~~v~v~~p-n~~G~i~ 201 (946)
++++ ++.. . ..++++.|+.+...|+++...... .+ .+.+++.++. +++++ ++++++++++.+| |.+|.+.
T Consensus 119 ~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~-~~-~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~ 196 (402)
T PRK07505 119 LGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGI-CA-DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGIA 196 (402)
T ss_pred HHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhh-hh-cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCcC
Confidence 7554 3221 1 112333455666899986432211 22 2456676654 45555 6666788888887 6789999
Q ss_pred chHHHHHHHHhCCcEEEEEecCccccCCCCC------CCccc---e--EEEecc-ccccccCCCCCCceEEEEE-chhhh
Q 002263 202 DYGDFIKNAHANGVKVVMATDLLALTILKPP------GELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYK 268 (946)
Q Consensus 202 di~~i~~~a~~~gal~~v~a~~~al~~l~~~------~~~Ga---D--i~v~s~-k~lg~P~~~GGP~~g~l~~-~~~~~ 268 (946)
|+++|.++|+++|+++++| +.++++.+.+. ..+|. | +++.+. |.|+++ | |++.+ ++++.
T Consensus 197 ~~~~i~~l~~~~~~~li~D-Ea~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~------G-g~~~~~~~~~~ 268 (402)
T PRK07505 197 PVKELLRLQEKYGLFLYID-DAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS------G-GVIMLGDAEQI 268 (402)
T ss_pred CHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc------C-eEEEeCCHHHH
Confidence 9999999999999999994 33333222111 12332 3 455565 877532 2 56654 45555
Q ss_pred hcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH
Q 002263 269 RMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALG 348 (946)
Q Consensus 269 ~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~ 348 (946)
+.+... ...+.+ .+ |..+ .+..+..+++ ..+..+.+.+..+++.++..++.+.
T Consensus 269 ~~~~~~----------~~~~t~------------~~--~~~~-~a~aa~~a~l--~~~~~~~~~~~~~~l~~~~~~~~~~ 321 (402)
T PRK07505 269 ELILRY----------AGPLAF------------SQ--SLNV-AALGAILASA--EIHLSEELDQLQQKLQNNIALFDSL 321 (402)
T ss_pred HHHHHh----------CCCcee------------CC--CCCH-HHHHHHHHHH--HHHhccCcHHHHHHHHHHHHHHHHH
Confidence 544100 000100 01 1111 1222223332 3344555555555555554444333
Q ss_pred HhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 349 LKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 349 L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~-------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+... ....++....+..+. +.++.++|.++||.++... .+.||+++...+|++|+++++++|..
T Consensus 322 ~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~ 395 (402)
T PRK07505 322 IPTE-----QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKE 395 (402)
T ss_pred HHhc-----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHH
Confidence 2111 011222222222222 6789999999999986541 25899999999999999999999963
No 490
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.43 E-value=5.4e-11 Score=135.37 Aligned_cols=298 Identities=13% Similarity=0.146 Sum_probs=184.6
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 138 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~ 138 (946)
++.|-.|+..|+.+.+.+.+...-.+.| . + ++ ..++++.+|+++|.++.++.+++|++.++..++.++
T Consensus 25 l~~~~~~~~~p~~~~~a~~~~~~~~~~y---~-~--~~----~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-- 92 (356)
T PRK08056 25 FSANINPLGMPVSLKRAIIDNLDCAERY---P-D--VE----YRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-- 92 (356)
T ss_pred eccccCCCCCCHHHHHHHHHHHHhcccC---c-C--cc----HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh--
Confidence 3456666778888776665422212223 1 1 11 356778999999999999999998887766555443
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---------cccc-cCCCEeEEEEEcC-CCceeecc---hH
Q 002263 139 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YG 204 (946)
Q Consensus 139 ~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---------~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~ 204 (946)
. +++ +++..-.++.+...+ +..|++++.++.+ ++.+ +.+++++|++.+| |.+|.+.+ ++
T Consensus 93 ~--~g~-viv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~ 165 (356)
T PRK08056 93 K--PRR-AMIVTPGFAEYRRAL----QQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQ 165 (356)
T ss_pred C--CCC-EEEeCCCcHHHHHHH----HHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHH
Confidence 2 565 555555566555543 3568888887652 1223 4578899999998 78999887 88
Q ss_pred HHHHHHHhCCcEEEEEecCccc---c--CCCCCCCccceEEEecc-ccccccCCCCCCceEEEEEc-hhhhhcCCCceEe
Q 002263 205 DFIKNAHANGVKVVMATDLLAL---T--ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVG 277 (946)
Q Consensus 205 ~i~~~a~~~gal~~v~a~~~al---~--~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G 277 (946)
+|+++|+++|+++++|.-...+ + .+.......-++++.|. |.|+.| |--+||+.+. +++++.+-
T Consensus 166 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~----- 236 (356)
T PRK08056 166 AIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMR----- 236 (356)
T ss_pred HHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCc----chhheeeecCCHHHHHHHH-----
Confidence 8999999999999994311111 1 00111234567888887 888643 2346888764 34433330
Q ss_pred EeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 002263 278 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV 357 (946)
Q Consensus 278 ~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~ 357 (946)
+-....++ +.+ +..++.. .+.+.+-++++.++..+..+++.+.|++++++.+
T Consensus 237 -----------------------~~~~~~~~---~~~-~~~~a~~-~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 288 (356)
T PRK08056 237 -----------------------RQQMPWSI---NAF-AALAGEV-ILQDRAYQQATWQWLAEEGARFYQALCALPLLTV 288 (356)
T ss_pred -----------------------HhCCCCch---hHH-HHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 00000111 222 2222221 1223333566677778888899999988833776
Q ss_pred cCCCCcCeEEEecCC-HHHHHHHHHHcCCeeeeec------CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 358 QGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVD------SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 358 ~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~~------~~~lris~~~~~t~edid~ll~~l~ 416 (946)
... ...-+.++++. ..++.+.|.++||.++... ++.||+++. +.++.++|+++|.
T Consensus 289 ~~~-~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~ 350 (356)
T PRK08056 289 WPG-RANYLFLRCERPDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALR 350 (356)
T ss_pred cCC-CCcEEEEEcCCChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHH
Confidence 532 11124455544 6789999999999886431 368999986 6788888888885
No 491
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.43 E-value=1.8e-12 Score=134.48 Aligned_cols=285 Identities=18% Similarity=0.214 Sum_probs=179.3
Q ss_pred HHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHHHcCCEEEEEcCCCC
Q 002263 524 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 524 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~~~G~~vv~v~~~~~ 600 (946)
++++.+++++|-+.. ++..||++|++ ++++.....| +.+||+-+-+|-.... .+.+.|+.++.+...+|
T Consensus 60 rLE~~vA~l~GKEAg-LFv~SGTmgNl---laIm~Hc~~r----g~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~d 131 (384)
T KOG1368|consen 60 RLEQRVAELFGKEAG-LFVPSGTMGNL---LAIMVHCHQR----GSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEND 131 (384)
T ss_pred HHHHHHHHHhCccce-eeecccccccH---HHHHHHhcCC----CceEEeccchheeehhccChhhhccceeEeeeeCCC
Confidence 577889999998764 66678888874 4555544333 4689999888854433 37788999999998899
Q ss_pred CCCCHHHHHHHHHh-----cCCCeEEEEEeCC-Cccc-ccc--cCHHHHHHHHHHcCCEEEEeccc-ccccccccCCC-c
Q 002263 601 GNINIEELRKAAEA-----NRDNLSTLMVTYP-STHG-VYE--EGIDEICKIIHDNGGQVYMDGAN-MNAQVGLTSPG-Y 669 (946)
Q Consensus 601 g~~D~e~L~~~i~~-----~~~~t~~vvvt~P-n~~G-~~~--~~i~~I~~ia~~~g~ll~vD~a~-~~a~~gl~~pg-~ 669 (946)
|.+|++++++++.- |.+-|++|.+.+- +..| .+- +.+.+|.++|+++|+.+|+|||. +|+...+.-|- .
T Consensus 132 gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~ 211 (384)
T KOG1368|consen 132 GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKK 211 (384)
T ss_pred CeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHH
Confidence 99999999999963 3356889999875 3344 554 24677888999999999999986 33333332231 2
Q ss_pred c--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCC-CCcccCccchhhHHHHHHH
Q 002263 670 I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL-GTIAAAPWGSALILPISYT 746 (946)
Q Consensus 670 ~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~-~~i~~~~~g~~~~~~~a~a 746 (946)
+ -+|.+...+.|.++.|.| .+++.+++++.+.. .+ | |.. +.+.- ++.+++++..
T Consensus 212 i~~~fDSVsiCLSKglgAPVG------SViVG~k~FI~kA~--~~----------R-KalGGGmRQ----sGvLaaaaLv 268 (384)
T KOG1368|consen 212 ICSAFDSVSICLSKGLGAPVG------SVIVGSKDFIDKAR--HF----------R-KALGGGMRQ----SGVLAAAALV 268 (384)
T ss_pred HHHhhhhhhhhhhccCCCCcc------cEEEccHHHHHHHH--HH----------H-HHhcCchhH----HHHHHHHHHH
Confidence 2 378888778898865532 34554555443321 00 0 110 11211 2222333322
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 824 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~ 824 (946)
.|. +.+. ..+.....|+.|++.+... +.+..+.. . .+.+.+.+. ..+++++++.+++.++|+.+-.
T Consensus 269 al~----~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~-e--tNiv~~~l~----q~~~~~~~l~~~~~k~gi~lm~ 336 (384)
T KOG1368|consen 269 ALD----ENVP-LLRADHKRAKELAEYINTPEEIRVEVPAV-E--TNIVNMVLC----QARLTAEELCKFLEKNGILLMG 336 (384)
T ss_pred Hhh----cchH-HHHHHHHHHHHHHHHhccccceeeecchh-h--cceeeeecc----cccCCHHHHHHHHHHCCeEEee
Confidence 222 2222 2334456677777777653 23222110 1 111111111 2468999999999999998532
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 002263 825 MSWPVPGTLMIEPTESESKEELDRYCDALI 854 (946)
Q Consensus 825 ~~~p~~~~lri~~t~~~t~~eid~~~~aL~ 854 (946)
.. ...+|+.+....|.++++..+..+.
T Consensus 337 ~~---s~r~Rivlh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 337 GA---SRRIRIVLHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred cc---ccceEEEEEEecCHHHHHHHHHHHH
Confidence 21 2358999999999999999999885
No 492
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.43 E-value=3.4e-11 Score=141.49 Aligned_cols=307 Identities=19% Similarity=0.204 Sum_probs=180.1
Q ss_pred ccHHHHHHHHHHHHHHhhC----CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH-HcCC
Q 002263 516 QGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCGM 590 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G----~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~-~~G~ 590 (946)
+|..++...+.+++.+.+| ++...+..++|++.. ..+++..+. .+++.|+++++.++.+...+. ..|+
T Consensus 86 ~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~a--l~~l~~~l~-----~pGd~Vlv~~P~Y~~~~~~~~~~~g~ 158 (468)
T PLN02450 86 HGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSA--NETLMFCLA-----EPGDAFLLPTPYYPGFDRDLKWRTGV 158 (468)
T ss_pred CChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHH--HHHHHHHhC-----CCCCEEEECCCCCCchHHHHhhcCCc
Confidence 5766666666666666555 344455566665532 222233321 256899999998877766666 5899
Q ss_pred EEEEEcCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-c
Q 002263 591 KIVSVGTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-Q 661 (946)
Q Consensus 591 ~vv~v~~~~--~g~~D~e~L~~~i~~~---~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~ 661 (946)
+++.+++++ +..+|++++++++++. ..++++|++++| |.+|.+- +.+++|.++|+++|+++++|.++... +
T Consensus 159 ~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f 238 (468)
T PLN02450 159 EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVF 238 (468)
T ss_pred EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccccccc
Confidence 999999853 3578999999988642 247899999999 5789875 25888999999999999999986421 1
Q ss_pred cc--ccCCC----c---cC---CC--EEEeCCCcccccCCCCCCCcceeEEEeccc-CCCCCCCccccCCCCCCCCCCCC
Q 002263 662 VG--LTSPG----Y---IG---AD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 662 ~g--l~~pg----~---~G---aD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
.+ +.+.. + .| .+ +++.++.|+|+.| |.++|++++.++. ...+-. . ..
T Consensus 239 ~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~----GlRiG~li~~~~~l~~~~~~-------------~-~~ 300 (468)
T PLN02450 239 DSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLP----GFRVGAIYSNDEMVVSAATK-------------M-SS 300 (468)
T ss_pred CCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCC----CccEEEEEECCHHHHHHHHH-------------H-hh
Confidence 11 11100 0 01 11 4566788988644 7899999987542 221110 0 00
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHcHh-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEeccccc
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMGSK-----GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK 801 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG~e-----Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~ 801 (946)
...++ .. ...+++ .++... -+++..++..++.+.+.+.|++. .+.+..+++.++ ++++++...
T Consensus 301 ~~~~s------~~-~Q~a~~--~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~f--lwi~l~~~~ 368 (468)
T PLN02450 301 FGLVS------SQ-TQYLLS--ALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLF--CWVDMRHLL 368 (468)
T ss_pred cCCCC------HH-HHHHHH--HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEE--EEEEchHhc
Confidence 01111 11 111111 122221 23444555556677888888775 322222223222 345654211
Q ss_pred ccCC-CCHHHHHHHHH-HCCccc-CCCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 802 NTAG-IEPEDVAKRLM-DYGFHG-PTMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 802 ~~~g-~~~~~i~~~L~-~~Gi~~-~~~~~--p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.... ....++.++|. +.|+.+ |...| +.++++||+++. .+++++++.++.|++++++.
T Consensus 369 ~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 369 KSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred CcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhc
Confidence 1001 12245777776 579985 33223 235899999975 34788888888888776543
No 493
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.43 E-value=2.4e-11 Score=136.69 Aligned_cols=262 Identities=16% Similarity=0.164 Sum_probs=172.1
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec-ccccc
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-LKDID 180 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~-~~~l~ 180 (946)
.++++.+|+++|.++.++.+++|++++..++..++ . +| +|++++-.|+.+...++ ..|++++.++ +++++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l--~--~g-~vl~~~p~y~~~~~~~~----~~g~~~~~~~d~~~l~ 120 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL--A--PG-RVLVLAPTYSEYARAWR----AAGHEVVELPDLDRLP 120 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh--C--CC-eEEEeCCCcHHHHHHHH----HcCCEEEEeCCHHHHH
Confidence 46778999999998889999998888777654332 2 56 69999888988877654 4688888875 55566
Q ss_pred c-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCCCC----CCccceEEEecc-cccccc
Q 002263 181 Y-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILKPP----GELGADIVVGSA-QRFGVP 250 (946)
Q Consensus 181 ~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~~~----~~~GaDi~v~s~-k~lg~P 250 (946)
+ + .++++|++++| |.+|.+.| +++|+++|+++|++++++.-...+..-.+. ...+-+++++|. |.||.|
T Consensus 121 ~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 199 (330)
T TIGR01140 121 AAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLA 199 (330)
T ss_pred hhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCc
Confidence 6 6 46788889998 68999988 677888899999999994311111111111 123567888887 887643
Q ss_pred CCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhh
Q 002263 251 MGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG 330 (946)
Q Consensus 251 ~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~G 330 (946)
| =.+|++++++++++.+... ..+.+++ .. +..++. .++...+
T Consensus 200 -G---~R~G~i~~~~~~~~~l~~~----------------------------~~~~~~s--~~--~q~~~~--~~l~~~~ 241 (330)
T TIGR01140 200 -G---LRLGFVVAHPALLARLREA----------------------------LGPWTVN--GP--ARAAGR--AALADTA 241 (330)
T ss_pred -h---hhhhheeCCHHHHHHHHhc----------------------------CCCCCch--HH--HHHHHH--HHHhchH
Confidence 1 1258999988877665210 0001111 11 111111 2222222
Q ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecCCHHHHHHHHHHcCCeeeee------cCCeEEEEeccC
Q 002263 331 -LKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDET 402 (946)
Q Consensus 331 -l~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~------~~~~lris~~~~ 402 (946)
.+.+.++...+.+++.+.|++++.+++... ..| +.+..++..++.++|.++||.+... ..+.+|++++.
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f--~~~~~~~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~- 318 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGGLEVVGGTALF--LLVRTPDAAALHEALARRGILIRDFDNFPGLDPRYLRFALPT- 318 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeE--EEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC-
Confidence 366778888899999999998864555432 122 3345545778999999999988543 23689999874
Q ss_pred CCHHHHHHHHHHHh
Q 002263 403 TTLEDVDKLFIVFA 416 (946)
Q Consensus 403 ~t~edid~ll~~l~ 416 (946)
..++ ++|+.+|+
T Consensus 319 -~~~~-~~~~~~l~ 330 (330)
T TIGR01140 319 -DEEN-DRLEEALA 330 (330)
T ss_pred -HHHH-HHHHHhhC
Confidence 3355 88888763
No 494
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.43 E-value=7.4e-11 Score=133.91 Aligned_cols=264 Identities=13% Similarity=0.123 Sum_probs=166.9
Q ss_pred HHHHhCC--CCc-ceEEcccHHHHHHHHHHHhccccC-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc------
Q 002263 108 IADLTGL--PMS-NASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------ 177 (946)
Q Consensus 108 la~L~g~--~~~-~~sl~~~~Ta~~ea~~la~~~~~~-~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~------ 177 (946)
+..-.|. ++. ++.+++|++.++..+..++. ..+ ++|+|+++.-.|+.+...++ ..|++++.++++
T Consensus 49 ~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~ 123 (350)
T TIGR03537 49 FERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYPVYERGAL----FAGGEPTAVKLKKEDGFL 123 (350)
T ss_pred HHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCcchHHHHH----hcCCEEEEcccCcccCCc
Confidence 3333464 455 78899999877766655542 211 23799999999998887764 468888877652
Q ss_pred ----cccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCcc---ccCC-CCCCCccce--EEEe
Q 002263 178 ----DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA---LTIL-KPPGELGAD--IVVG 242 (946)
Q Consensus 178 ----~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~a---l~~l-~~~~~~GaD--i~v~ 242 (946)
++++ +.++++++++++| |.+|.+.+ +++|+++|+++|++++++. ..+ .+.. .+...++.| |++.
T Consensus 124 ~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~~~~~~i~~~ 202 (350)
T TIGR03537 124 LRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDE-CYTEIYFGEPPHSALEVGIENVLAFH 202 (350)
T ss_pred cCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEec-cccccccCCCCCchhhcCcCCEEEEe
Confidence 2334 5568999999988 78999887 8999999999999999943 222 1110 011122333 6666
Q ss_pred cc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 243 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 243 s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|. |.|+.| |=-+|++..++++.+.+.. -+.+.+++++......+.+
T Consensus 203 s~SK~~g~~----GlRiG~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~q~~~~~- 249 (350)
T TIGR03537 203 SLSKRSGMT----GYRSGFVAGDEKLISFLRK----------------------------LRANFGVASPDFVQAAAKA- 249 (350)
T ss_pred ecccccCCc----cccceeeecCHHHHHHHHH----------------------------HHHhhccCCCHHHHHHHHH-
Confidence 75 877543 1136888777666554410 0111222322211111111
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCe-EEEecCC---HHHHHHHHHHcCCeeeee------c
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDT-VKVKCAD---AHAIASAAYKIEMNLRVV------D 391 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~-~~i~~~~---~~~v~~~L~~~GI~~~~~------~ 391 (946)
.+...+-++++.+++.++.+.+.+.|++.| +++.... ..- +-++++. +.++.+.|.++||.+..- .
T Consensus 250 --~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~~-g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~f~~~~ 325 (350)
T TIGR03537 250 --AWSDDNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYPD-ATFYLWVKVPSGIDAKDYALRLLENGIVVAPGENFGSGE 325 (350)
T ss_pred --HhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-eEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCC
Confidence 233344567778888888889999999887 7655321 111 2244443 788999999999988531 1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 392 SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 392 ~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++.+|+++. .+.+++++.++.|+
T Consensus 326 ~~~~Ri~~~--~~~~~~~~~l~~~~ 348 (350)
T TIGR03537 326 EGYVRVALV--PTLEECEEALRLWE 348 (350)
T ss_pred CCEEEEEec--CCHHHHHHHHHHHh
Confidence 478999985 57889998888875
No 495
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.43 E-value=1.6e-11 Score=139.86 Aligned_cols=269 Identities=18% Similarity=0.235 Sum_probs=171.1
Q ss_pred HHHHHHHHHhC------CCCc-ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec
Q 002263 103 NFQTMIADLTG------LPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 175 (946)
Q Consensus 103 e~q~~la~L~g------~~~~-~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~ 175 (946)
++++.+|++++ .+.. ++.+..|++++...+...+... ++++|++++-.|+.+...++. .|++++.++
T Consensus 48 ~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~--~~~~vlv~~P~y~~~~~~~~~----~g~~~~~~~ 121 (363)
T PF00155_consen 48 ELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKIN--PGDTVLVPDPCYPSYIEAARL----LGAEVIPVP 121 (363)
T ss_dssp HHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSS--TTSEEEEEESSSTHHHHHHHH----TTSEEEEEE
T ss_pred HHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhccccc--ccccceecCCccccccccccc----cCceeeecc
Confidence 45678888888 6666 6767766666655554444222 789999999999999888764 466666665
Q ss_pred ----------cccccc-cCC------CEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCCCC--
Q 002263 176 ----------LKDIDY-KSG------DVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILKPP-- 232 (946)
Q Consensus 176 ----------~~~l~~-i~~------~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~~~-- 232 (946)
+++|++ +++ ++++|++.+| |.+|.+-+ +++|+++|+++|++++++. ..+......+
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De-~y~~~~~~~~~~ 200 (363)
T PF00155_consen 122 LDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDE-AYSDLIFGDPDF 200 (363)
T ss_dssp EEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEE-TTTTGBSSSSHT
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeee-ceeccccCCCcc
Confidence 344554 433 5788899998 67998764 5666666999999999953 2222222211
Q ss_pred ------CCccce-EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccccccc
Q 002263 233 ------GELGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 304 (946)
Q Consensus 233 ------~~~GaD-i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~a 304 (946)
.+.+.+ +++.|. |.||.| |--+|++.+.+++.+.+... ....
T Consensus 201 ~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~~~--------------------------~~~~ 250 (363)
T PF00155_consen 201 GPIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLRRF--------------------------QRSG 250 (363)
T ss_dssp HHHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHHHH--------------------------HHHT
T ss_pred Ccccccccccccceeeeecccccccc----ccccccccchhhhhhhhhhc--------------------------cccc
Confidence 012233 677776 888654 12378999988777655100 0011
Q ss_pred CCCccchHHHHHHHHHHHHH-HhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEE-EecCC--HHHHHHHH
Q 002263 305 TSNICTAQALLANMAAMYAV-YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVK-VKCAD--AHAIASAA 380 (946)
Q Consensus 305 Tsni~t~~~l~a~~aa~y~~-~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~-i~~~~--~~~v~~~L 380 (946)
.. + ......+++++.. ....+-++++.++..++.+++.+.|++.| +.+.... ...+. +..+. ..++.+.|
T Consensus 251 ~~---~-~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~L 324 (363)
T PF00155_consen 251 LS---S-SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIG-ITVLPPE-AGFFLWVRLDPNDAEELAQEL 324 (363)
T ss_dssp TS---S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEHHS-BSSEEEEEESHHHHHHHHHHH
T ss_pred cc---c-chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhh-hheeecc-CccEEEEEcccchHHHHHHHH
Confidence 11 1 2222222222111 10112457788888899999999999887 8876422 11222 22332 57899999
Q ss_pred HHc-CCeeeee----cCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 381 YKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 381 ~~~-GI~~~~~----~~~~lris~~~~~t~edid~ll~~l 415 (946)
.++ ||.+... .++.+|+++ ...+++++++++++|
T Consensus 325 ~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 325 LEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred HHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 988 9987542 267899999 889999999999875
No 496
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.42 E-value=7.6e-11 Score=137.25 Aligned_cols=295 Identities=15% Similarity=0.189 Sum_probs=176.3
Q ss_pred HHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC----------
Q 002263 523 NNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM---------- 590 (946)
Q Consensus 523 ~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~---------- 590 (946)
.++.++++++++.+. ..++.++|+++++.++..+|.|. | +++.|.+..+.||....+....+-
T Consensus 87 ~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~---~--r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK08088 87 LELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT---K--RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGL 161 (425)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHh---C--CCeEEEECCccCCccHHHHHhhCCCCccccCCCC
Confidence 378888888876532 34678899998888888877763 1 234455778899988776443221
Q ss_pred ---EEEE--EcCCCCCC-C--CHHHHHHHHHh--cCCCeEEEEEeCC-Ccccccc---cCHHHHHHHHHHcCCEEEEecc
Q 002263 591 ---KIVS--VGTDAKGN-I--NIEELRKAAEA--NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGA 656 (946)
Q Consensus 591 ---~vv~--v~~~~~g~-~--D~e~L~~~i~~--~~~~t~~vvvt~P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a 656 (946)
.+.. +|.+.++. . ++++|+++++. +.+++++|+++.. +..|.+. ..+++|.++|+++|++++.|.+
T Consensus 162 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev 241 (425)
T PRK08088 162 MPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEV 241 (425)
T ss_pred CCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 0122 22222221 1 15678888862 3467777776643 2345543 2499999999999999999987
Q ss_pred cccccccccCCCc------cC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 657 NMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 657 ~~~a~~gl~~pg~------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
+. ++.+++. .| .|+.++ .|+++ +|-++|++.+++++.+.+.... ...
T Consensus 242 ~~----g~g~~g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~v~~~~~~~~~~~~~~--------------~~~ 296 (425)
T PRK08088 242 QT----GAGRTGTLFAMEQMGVAADLTTF--AKSIA-----GGFPLAGVTGRAEVMDAIAPGG--------------LGG 296 (425)
T ss_pred cc----CCCcCcchhHHhhcCCCCCEEEE--ecccc-----CCCcceeeEecHHHHhhcCCCC--------------CCC
Confidence 53 3333321 23 455544 58884 4567999999887766543210 011
Q ss_pred CcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEeccc-cc-
Q 002263 729 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LK- 801 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~-~~- 801 (946)
..+ ++....+++.++|..+..+.+.+..+ ...+++.+.|.+. +... ..|. |.+ +.+.+.. ..
T Consensus 297 t~~----~~~~~~~a~~~~l~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~---~~l~l~~~~~~ 365 (425)
T PRK08088 297 TYA----GNPIACAAALAVLKVFEQENLLQKAN---ALGEKLKDGLLAIAEKHPEIGDVRGL-GAM---IAIELFEDGDH 365 (425)
T ss_pred CCC----cCHHHHHHHHHHHHHHHhcCHHHHHH---HHHHHHHHHHHHHHHhCCCeEEEecc-ceE---EEEEEecCCCC
Confidence 122 23444555666676665544443333 3345555555442 3221 2222 322 3344311 00
Q ss_pred -ccCCCCHHHHHHHHHHCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 802 -NTAGIEPEDVAKRLMDYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 802 -~~~g~~~~~i~~~L~~~Gi~~~-~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
........++.+++.++|+.+. ...+ ++.+|++|+...|++||++.++.|.++++++
T Consensus 366 ~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 366 SKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 0011235788999999997642 2222 4889999999899999999999999987653
No 497
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.42 E-value=8.3e-11 Score=126.30 Aligned_cols=275 Identities=20% Similarity=0.194 Sum_probs=167.4
Q ss_pred HHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-CCHH---HHHHcCCEEEEEcCCC
Q 002263 524 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPA---TAAMCGMKIVSVGTDA 599 (946)
Q Consensus 524 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg-~~~~---~a~~~G~~vv~v~~~~ 599 (946)
.+++.++.|=|.-.. +...||-.+ ..+++.... ..+|.|+.+..-+| ++.. ....+|+++++|..+
T Consensus 66 vlE~RiAaLEGG~aa-~a~aSG~AA---~~~ai~~la-----~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~- 135 (426)
T COG2873 66 VLEERIAALEGGVAA-LAVASGQAA---ITYAILNLA-----GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD- 135 (426)
T ss_pred HHHHHHHHhhcchhh-hhhccchHH---HHHHHHHhc-----cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC-
Confidence 466788887664432 333445433 334443321 25688886555444 4433 256799999999763
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLN 678 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s 678 (946)
|++.++++|+ ++|++|++..- |+.+.+. ||++|+++||++|++++||.. .+-.-+++|.+.|+||++.|
T Consensus 136 ----d~~~~~~aI~---~nTkavf~EtigNP~~~v~-Die~ia~iAh~~gvpliVDNT--~atpyl~rP~~hGADIVvHS 205 (426)
T COG2873 136 ----DPENFEAAID---ENTKAVFAETIGNPGLDVL-DIEAIAEIAHRHGVPLIVDNT--FATPYLCRPIEHGADIVVHS 205 (426)
T ss_pred ----CHHHHHHHhC---cccceEEEEeccCCCcccc-CHHHHHHHHHHcCCcEEEecC--CCcceecchhhcCCCEEEEe
Confidence 7999999997 99999998764 6667776 899999999999999999954 33345789999999999999
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCC-CCCcc---ccCCCC-CCC-----C--------CC---CCCCCcccCccch
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPV---VSTGGI-PAP-----E--------KS---QPLGTIAAAPWGS 737 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~l-p~~~v---~~~~d~-~~~-----~--------~~---~~~~~i~~~~~g~ 737 (946)
+.|+.+ |=|-.+|-+.+..-..+.- +++.- .....| |-. + |. +.++.. -+|
T Consensus 206 ~TK~ig----GhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~-lsP--- 277 (426)
T COG2873 206 ATKYIG----GHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGAT-LSP--- 277 (426)
T ss_pred eccccc----CCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccc-cCc---
Confidence 999984 2344555555553211111 22110 001111 100 0 00 001110 011
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
-.+++...|-|-|.-+.+++++||..+++.|+++.+|.+ +..+.++ +-...+++++...
T Consensus 278 ------fnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~------------V~YpgL~---~~~~h~la~kyl~ 336 (426)
T COG2873 278 ------FNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAW------------VNYPGLA---SHPYHALAKKYLP 336 (426)
T ss_pred ------HHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeee------------eecCCCC---CCcchhHHHhhcc
Confidence 124455667777777889999999999999998755421 2222221 1234567777666
Q ss_pred CCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 818 ~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+|.- +.|.+.+ .--.|.-.+|++.|+-+..
T Consensus 337 ~g~g---------~vltF~~--kgg~ea~~~fi~~l~L~s~ 366 (426)
T COG2873 337 KGAG---------AVLTFGV--KGGYEAGKKFIDALKLFSH 366 (426)
T ss_pred CCCc---------eEEEEEe--cChHHHHHHHHHHHHHHHh
Confidence 5532 2333333 2234667888888875543
No 498
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.42 E-value=3.1e-11 Score=139.70 Aligned_cols=276 Identities=17% Similarity=0.170 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc----cC---CCCEEEEc-CCCCHHHHHHHHH-h------
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ----KG---KKKTFIIA-SNCHPQTIDICIT-R------ 163 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~----~~---~gd~vvv~-~~~Hps~~~~~~~-~------ 163 (946)
+...++++.+++++|.+ .+.++++||.|.|+++.+.+.. ++ .+++||+. ...|.++...+.. .
T Consensus 83 ~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 83 DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 35567788999999875 4888999999999887544311 01 23566644 4677766554420 0
Q ss_pred -hcCCCeEEEEe---ccccccc-cCCCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCcc-ccCCCC-
Q 002263 164 -ADGFDIKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP- 231 (946)
Q Consensus 164 -a~~~gi~v~~~---~~~~l~~-i~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~a-l~~l~~- 231 (946)
..+....+..+ |++++++ +.+++++|++.+| |.+|.+.| +++|.++|+++|++++++. ..+ ++....
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DE-v~~g~g~~g~~ 239 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDE-IQTGLGRTGKL 239 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec-hhhCCCCCchH
Confidence 01112233444 4466776 7788999999887 67999886 9999999999999999942 222 332110
Q ss_pred ----CCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 232 ----PGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 232 ----~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
......|+++. +|+|++ |.-.+|++.+++++++.+... .. ..|
T Consensus 240 ~~~~~~g~~~D~~~~-~K~l~g----g~~~ig~v~~~~~~~~~l~~~----------~~----------------~~t-- 286 (401)
T PRK00854 240 LAEEHEGIEADVTLI-GKALSG----GFYPVSAVLSNSEVLGVLKPG----------QH----------------GST-- 286 (401)
T ss_pred hHHhhcCCCCCEEEe-cccccC----CccCeEEEEEcHHHHhcccCC----------CC----------------CCC--
Confidence 11234688876 488842 221257788888776655210 00 001
Q ss_pred ccchH-HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--C--CCcCeEEEecCC--HHHHHHHH
Q 002263 308 ICTAQ-ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--L--PFFDTVKVKCAD--AHAIASAA 380 (946)
Q Consensus 308 i~t~~-~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~--~~~~~~~i~~~~--~~~v~~~L 380 (946)
++.+. ...+..+++ ..+..+ .+.++..++.+++.+.|++++ ..... . ..+-.+.+..+. ..++++.|
T Consensus 287 ~~~~~~~~aa~~a~L--~~l~~~---~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L 360 (401)
T PRK00854 287 FGGNPLACAVARAAL--KVLTEE---GMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAGGARQYCEAL 360 (401)
T ss_pred CCcCHHHHHHHHHHH--HHHHHc---CHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCchhHHHHHHHH
Confidence 11111 122223332 333222 245677778899999998875 33221 1 111122232222 67899999
Q ss_pred HHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 381 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 381 ~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.++||.+.....+.||++++..+|++||+++++.|.
T Consensus 361 ~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 361 KERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred HHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 999999876556799999999999999999999986
No 499
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.42 E-value=1.3e-11 Score=140.22 Aligned_cols=215 Identities=19% Similarity=0.163 Sum_probs=139.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHH----cCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM----CGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~----~G~~vv~v~~ 597 (946)
..++++.++++.|.+.+ +..++|.++..++ +..+ + ++|+||++...+|..+..... .++++.
T Consensus 56 ~~~le~~lA~leg~~~~-v~~~sG~aAi~~~---l~~l--~----~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~---- 121 (364)
T PRK07269 56 RAKLEETLAAIESADYA-LATSSGMSAIVLA---FSVF--P----VGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT---- 121 (364)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHH---HHHh--C----CCCEEEEecCCcCchHHHHHHHHhcCcEEEE----
Confidence 45788999999997764 4456666555322 2221 2 468899987777665553221 122221
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 676 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~ 676 (946)
...|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|++... ..+.+|-..|+|+++
T Consensus 122 ---~~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~-di~~I~~la~~~gi~vvvD~t~~~--~~~~~pl~~gaDivv 192 (364)
T PRK07269 122 ---YANTEEELIAAIE---EDTDIVYIETPTNPLMVEF-DIEKVAKLAHAKGAKVIVDNTFYS--PIYQRPIELGADIVL 192 (364)
T ss_pred ---ecCCHHHHHHhcC---cCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhhCCcEEE
Confidence 2258999999997 789999999995 688887 899999999999999999987532 223467778999999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.|++|+++.+ |.--.|.+++++ .+.+.+.. . + ...+ .+.+ . . -+++...|-+-
T Consensus 193 ~S~tK~l~g~---~d~~gG~v~~~~~~l~~~~~~-~-----------~-~~~G-~~~s----~---~--~a~l~~~~L~t 246 (364)
T PRK07269 193 HSATKYLSGH---NDVLAGVVVTNDLELYEKLFY-N-----------L-NTTG-AVLS----P---F--DSYLLMRGLKT 246 (364)
T ss_pred ecCceeccCC---CcccceEEEeCcHHHHHHHHH-H-----------H-HHhC-CCCC----H---H--HHHHHHcCCCc
Confidence 9999998522 111145677753 34332210 0 0 0001 1111 1 1 12344445455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeeccC
Q 002263 756 LTEASKIAILNANYMAKRLEKH---YPILFRGV 785 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~---~~v~~~~~ 785 (946)
+..+.++..+++.++++.|+++ ..+.|++.
T Consensus 247 L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~ 279 (364)
T PRK07269 247 LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGK 279 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCc
Confidence 7777788889999999999875 34556653
No 500
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.42 E-value=4.9e-11 Score=135.97 Aligned_cols=263 Identities=14% Similarity=0.123 Sum_probs=161.6
Q ss_pred HHHHHHHHHHhCCCCcceEE-cccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----
Q 002263 102 LNFQTMIADLTGLPMSNASL-LDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 176 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl-~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 176 (946)
.++++.+|+++|+++.++.+ .+|+++++..++.++ .. +||+|++++..++.+...+ +..|++++.++.
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~-~~--~gd~vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTF-ID--PGDEVIIPTPTFSYYEISA----KAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHh-cC--CCCEEEEcCCChHHHHHHH----HHcCCEEEEeecCCCC
Confidence 56788999999998888888 456665555444433 22 7899999998887665544 346888877753
Q ss_pred ----ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CC--CCccceEEEecc-cc
Q 002263 177 ----KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP--GELGADIVVGSA-QR 246 (946)
Q Consensus 177 ----~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~--~~~GaDi~v~s~-k~ 246 (946)
+++++ +++++++|++++| |.+|.+.|++++.++++++|+++++|.-...+.... .+ .+..--++++|. |.
T Consensus 145 ~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~ 224 (361)
T PRK00950 145 SLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKV 224 (361)
T ss_pred CcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHh
Confidence 23444 5667889998888 679999999999999999999999943111111000 00 111222556675 87
Q ss_pred ccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHh
Q 002263 247 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 326 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~ 326 (946)
||.| |=.+|++.+++++++.+.. .+.+.+++ .. +..++. ..+.
T Consensus 225 ~g~~----GlRiG~~~~~~~~~~~~~~----------------------------~~~~~~~~--~~--~~~~a~-~~l~ 267 (361)
T PRK00950 225 FGLA----GLRIGYGFVPEWLIDYYMR----------------------------AKTPFSLT--RL--SQAAAI-AALS 267 (361)
T ss_pred hcCc----hhhcchhcCCHHHHHHHHH----------------------------hcCCCCCC--HH--HHHHHH-HHhc
Confidence 7532 1126888877766554310 00011111 11 111111 1112
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeee------cCCeEEEE
Q 002263 327 GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------DSNTVTAS 398 (946)
Q Consensus 327 g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~------~~~~lris 398 (946)
..+-+++..++..++.+++.+.|. +.+... ...-+.+.+++ +.+++++|.++||.++.. .++.+|+|
T Consensus 268 ~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis 342 (361)
T PRK00950 268 DKEYIEKSIEHGIKSREYLYNELP----FKVYPS-EANFVLVDVTPMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVS 342 (361)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcC----eeECCC-cceEEEEECCCCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEE
Confidence 222255555665555566655553 444321 11223444443 789999999999988642 24679999
Q ss_pred eccCCCHHHHHHHHHHHh
Q 002263 399 FDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 399 ~~~~~t~edid~ll~~l~ 416 (946)
++ +.+|+++++++|+
T Consensus 343 ~~---~~~~~~~l~~~L~ 357 (361)
T PRK00950 343 IG---TFEENERFLEILK 357 (361)
T ss_pred CC---CHHHHHHHHHHHH
Confidence 87 7889999999986
Done!