Query 002263
Match_columns 946
No_of_seqs 720 out of 5213
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 19:13:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002263.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002263hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wyu_A Glycine dehydrogenase ( 100.0 3E-57 1E-61 527.4 39.5 407 1-416 14-434 (438)
2 1wyu_B Glycine dehydrogenase s 100.0 3.8E-54 1.3E-58 506.2 39.3 438 435-933 29-472 (474)
3 1wyu_A Glycine dehydrogenase ( 100.0 6E-39 2E-43 373.2 36.8 406 401-857 4-437 (438)
4 1wyu_B Glycine dehydrogenase s 100.0 3.6E-36 1.2E-40 353.3 36.6 374 17-417 29-436 (474)
5 3mc6_A Sphingosine-1-phosphate 100.0 3.2E-30 1.1E-34 304.4 28.6 382 448-862 37-439 (497)
6 2dgk_A GAD-beta, GADB, glutama 100.0 7.2E-27 2.5E-31 272.5 35.9 383 448-862 17-436 (452)
7 3mad_A Sphingosine-1-phosphate 100.0 1.7E-26 5.7E-31 273.9 33.6 383 448-862 70-471 (514)
8 3vp6_A Glutamate decarboxylase 99.9 3.4E-26 1.2E-30 270.6 29.5 389 448-860 68-505 (511)
9 2jis_A Cysteine sulfinic acid 99.9 2.3E-26 8E-31 272.6 26.2 390 448-859 81-514 (515)
10 4e1o_A HDC, histidine decarbox 99.9 1.3E-25 4.6E-30 263.7 30.6 389 448-861 50-479 (481)
11 2okj_A Glutamate decarboxylase 99.9 1.5E-25 5.2E-30 264.9 28.5 395 448-859 65-501 (504)
12 3mc6_A Sphingosine-1-phosphate 99.9 6.6E-25 2.3E-29 259.0 33.8 378 1-417 13-432 (497)
13 3f9t_A TDC, L-tyrosine decarbo 99.9 5E-24 1.7E-28 242.3 39.1 369 453-858 7-396 (397)
14 3k40_A Aromatic-L-amino-acid d 99.9 2.2E-25 7.5E-30 261.4 27.8 386 448-861 45-472 (475)
15 1js3_A DDC;, DOPA decarboxylas 99.9 3.1E-25 1.1E-29 261.1 29.0 386 448-862 45-476 (486)
16 3hbx_A GAD 1, glutamate decarb 99.9 8.5E-24 2.9E-28 249.6 38.6 381 448-862 31-446 (502)
17 2dgk_A GAD-beta, GADB, glutama 99.9 3.2E-23 1.1E-27 241.6 36.2 352 27-417 16-429 (452)
18 2jis_A Cysteine sulfinic acid 99.9 2.4E-23 8.2E-28 246.8 30.5 358 26-416 79-509 (515)
19 2qma_A Diaminobutyrate-pyruvat 99.9 9.2E-23 3.1E-27 240.7 31.2 383 453-859 75-495 (497)
20 3bc8_A O-phosphoseryl-tRNA(SEC 99.9 7.3E-23 2.5E-27 233.7 28.3 375 448-862 22-445 (450)
21 2z67_A O-phosphoseryl-tRNA(SEC 99.9 5.1E-23 1.7E-27 240.2 26.5 357 453-857 60-455 (456)
22 1elu_A L-cysteine/L-cystine C- 99.9 2.1E-21 7.1E-26 220.7 37.1 333 67-417 27-387 (390)
23 3e9k_A Kynureninase; kynurenin 99.9 2.6E-23 8.8E-28 243.2 20.6 304 101-417 113-456 (465)
24 1kmj_A Selenocysteine lyase; p 99.9 2.9E-21 9.8E-26 220.5 34.5 360 38-417 5-400 (406)
25 3f9t_A TDC, L-tyrosine decarbo 99.9 6.2E-21 2.1E-25 216.7 35.7 345 29-416 5-392 (397)
26 1qz9_A Kynureninase; kynurenin 99.9 1.3E-21 4.4E-26 224.8 30.3 306 96-417 68-397 (416)
27 3vp6_A Glutamate decarboxylase 99.9 9.9E-22 3.4E-26 232.3 29.5 363 26-417 66-500 (511)
28 4hvk_A Probable cysteine desul 99.9 2.8E-21 9.4E-26 218.4 31.8 292 93-417 37-368 (382)
29 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 1.7E-21 5.8E-26 218.7 29.0 363 448-862 40-463 (501)
30 2okj_A Glutamate decarboxylase 99.9 3.2E-21 1.1E-25 228.0 33.0 358 27-417 64-497 (504)
31 2dr1_A PH1308 protein, 386AA l 99.9 3.6E-21 1.2E-25 218.4 31.3 317 519-862 52-381 (386)
32 3cai_A Possible aminotransfera 99.9 3.2E-21 1.1E-25 220.7 31.0 348 36-417 11-404 (406)
33 3e77_A Phosphoserine aminotran 99.9 9.2E-22 3.2E-26 222.2 25.8 317 65-417 21-370 (377)
34 4hvk_A Probable cysteine desul 99.9 6.2E-21 2.1E-25 215.5 32.0 310 517-862 40-375 (382)
35 3mad_A Sphingosine-1-phosphate 99.9 9.7E-21 3.3E-25 224.3 35.0 356 27-417 69-464 (514)
36 3nnk_A Ureidoglycine-glyoxylat 99.9 1.2E-21 4E-26 224.5 26.3 315 518-860 44-390 (411)
37 3zrp_A Serine-pyruvate aminotr 99.9 1.7E-21 5.9E-26 220.7 26.5 316 518-861 33-364 (384)
38 1t3i_A Probable cysteine desul 99.9 7E-21 2.4E-25 218.5 30.9 302 98-417 71-408 (420)
39 3isl_A Purine catabolism prote 99.9 4.9E-21 1.7E-25 219.7 27.6 314 518-860 42-390 (416)
40 3e9k_A Kynureninase; kynurenin 99.9 2.5E-21 8.4E-26 226.4 25.3 317 520-860 111-461 (465)
41 2yrr_A Aminotransferase, class 99.9 2.7E-21 9.3E-26 216.2 24.2 310 519-859 32-352 (353)
42 1eg5_A Aminotransferase; PLP-d 99.9 4.7E-20 1.6E-24 208.9 33.7 305 519-862 43-378 (384)
43 3kgw_A Alanine-glyoxylate amin 99.9 7.4E-21 2.5E-25 216.2 26.7 315 519-861 55-389 (393)
44 1js3_A DDC;, DOPA decarboxylas 99.9 1.8E-20 6.2E-25 220.4 30.9 357 28-417 45-469 (486)
45 3hbx_A GAD 1, glutamate decarb 99.9 2.3E-19 7.7E-24 211.8 40.1 355 27-417 30-439 (502)
46 1kmj_A Selenocysteine lyase; p 99.9 1.7E-20 6E-25 214.1 29.5 314 519-860 66-405 (406)
47 2z9v_A Aspartate aminotransfer 99.9 1.6E-20 5.6E-25 213.7 28.5 317 518-861 40-372 (392)
48 1t3i_A Probable cysteine desul 99.9 2.5E-20 8.4E-25 214.0 29.9 317 520-862 72-415 (420)
49 2z67_A O-phosphoseryl-tRNA(SEC 99.9 5.6E-21 1.9E-25 222.9 24.4 340 28-417 57-453 (456)
50 3lvm_A Cysteine desulfurase; s 99.9 1.1E-19 3.6E-24 209.3 34.9 310 517-862 65-401 (423)
51 1m32_A 2-aminoethylphosphonate 99.9 2E-20 6.9E-25 210.2 28.1 314 521-858 38-363 (366)
52 4eb5_A Probable cysteine desul 99.9 7.5E-20 2.6E-24 207.2 33.0 308 517-863 40-376 (382)
53 2huf_A Alanine glyoxylate amin 99.9 3.2E-20 1.1E-24 211.4 29.7 313 519-861 51-384 (393)
54 3qm2_A Phosphoserine aminotran 99.9 1E-20 3.4E-25 214.9 24.1 317 58-416 30-379 (386)
55 4eb5_A Probable cysteine desul 99.9 1.8E-19 6E-24 204.1 33.6 291 94-417 38-368 (382)
56 2ch1_A 3-hydroxykynurenine tra 99.9 5.2E-20 1.8E-24 209.8 29.2 312 520-861 51-384 (396)
57 3zrp_A Serine-pyruvate aminotr 99.9 4.7E-20 1.6E-24 208.8 28.2 321 59-417 6-358 (384)
58 3f0h_A Aminotransferase; RER07 99.9 1.4E-20 5E-25 212.9 23.8 309 517-858 49-372 (376)
59 1iug_A Putative aspartate amin 99.9 1.7E-19 5.8E-24 201.8 32.2 318 59-417 5-343 (352)
60 3nnk_A Ureidoglycine-glyoxylat 99.9 5.4E-20 1.9E-24 210.6 28.7 330 58-417 16-385 (411)
61 1vjo_A Alanine--glyoxylate ami 99.9 3.2E-20 1.1E-24 211.5 26.6 309 518-857 65-392 (393)
62 1elu_A L-cysteine/L-cystine C- 99.9 5.8E-20 2E-24 208.7 28.6 309 520-856 59-388 (390)
63 1iug_A Putative aspartate amin 99.9 3.8E-20 1.3E-24 207.1 26.6 308 518-860 32-348 (352)
64 3isl_A Purine catabolism prote 99.9 6.1E-20 2.1E-24 210.6 28.6 332 58-417 14-385 (416)
65 3ke3_A Putative serine-pyruvat 99.9 8.5E-21 2.9E-25 215.9 21.0 293 96-417 32-371 (379)
66 1c4k_A Protein (ornithine deca 99.9 9.7E-21 3.3E-25 230.6 22.6 331 55-417 114-561 (730)
67 2dr1_A PH1308 protein, 386AA l 99.9 2.6E-19 8.8E-24 203.1 32.9 335 39-417 8-374 (386)
68 3f0h_A Aminotransferase; RER07 99.9 1E-19 3.5E-24 205.9 27.9 325 58-417 22-369 (376)
69 3lvm_A Cysteine desulfurase; s 99.9 5.7E-19 1.9E-23 203.2 34.5 319 67-417 33-394 (423)
70 1eg5_A Aminotransferase; PLP-d 99.9 5.6E-19 1.9E-23 199.9 33.9 288 96-417 41-371 (384)
71 2z9v_A Aspartate aminotransfer 99.8 1.4E-19 4.9E-24 205.9 28.0 319 66-417 18-366 (392)
72 3cai_A Possible aminotransfera 99.8 9.2E-20 3.2E-24 208.6 26.0 309 519-856 68-405 (406)
73 3ke3_A Putative serine-pyruvat 99.8 5.1E-20 1.7E-24 209.4 22.6 312 518-861 33-377 (379)
74 2yrr_A Aminotransferase, class 99.8 1.3E-19 4.5E-24 202.5 25.5 317 59-416 4-347 (353)
75 3m5u_A Phosphoserine aminotran 99.8 1.2E-19 4E-24 204.2 25.0 315 59-416 9-354 (361)
76 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 3.6E-20 1.2E-24 209.1 20.2 298 522-859 55-369 (371)
77 3k40_A Aromatic-L-amino-acid d 99.8 8.6E-19 3E-23 205.3 32.4 358 27-417 44-466 (475)
78 4e1o_A HDC, histidine decarbox 99.8 1.1E-18 3.7E-23 204.9 33.2 357 28-417 50-473 (481)
79 3ou5_A Serine hydroxymethyltra 99.8 4.4E-20 1.5E-24 206.3 20.0 308 524-861 104-442 (490)
80 1rv3_A Serine hydroxymethyltra 99.8 2.4E-19 8.4E-24 210.5 27.5 314 517-860 87-431 (483)
81 3vax_A Putative uncharacterize 99.8 4.8E-19 1.7E-23 202.1 27.7 292 93-417 57-395 (400)
82 3ffr_A Phosphoserine aminotran 99.8 1.9E-19 6.4E-24 202.1 23.7 295 96-416 40-358 (362)
83 3vax_A Putative uncharacterize 99.8 3.3E-19 1.1E-23 203.4 25.2 306 518-859 61-399 (400)
84 1qz9_A Kynureninase; kynurenin 99.8 1.1E-18 3.7E-23 200.4 29.5 305 520-859 71-401 (416)
85 2bkw_A Alanine-glyoxylate amin 99.8 3.9E-19 1.3E-23 201.4 25.4 315 520-859 38-383 (385)
86 2w8t_A SPT, serine palmitoyltr 99.8 8.1E-19 2.8E-23 202.8 27.6 299 516-862 105-417 (427)
87 2huf_A Alanine glyoxylate amin 99.8 8.2E-19 2.8E-23 199.7 26.7 320 65-417 27-378 (393)
88 2a7v_A Serine hydroxymethyltra 99.8 5.1E-19 1.7E-23 206.6 24.9 312 521-862 101-443 (490)
89 3tqx_A 2-amino-3-ketobutyrate 99.8 2E-19 6.9E-24 205.0 20.7 296 517-860 85-396 (399)
90 3ly1_A Putative histidinol-pho 99.8 2.1E-18 7.2E-23 193.5 28.0 286 522-859 53-351 (354)
91 2qma_A Diaminobutyrate-pyruvat 99.8 6.2E-18 2.1E-22 199.4 33.3 358 28-417 72-491 (497)
92 3ffh_A Histidinol-phosphate am 99.8 1.7E-18 5.8E-23 195.1 26.9 284 522-856 69-362 (363)
93 2ch1_A 3-hydroxykynurenine tra 99.8 1.6E-18 5.4E-23 197.5 26.8 323 65-417 26-378 (396)
94 3kgw_A Alanine-glyoxylate amin 99.8 9.8E-19 3.3E-23 198.6 24.4 320 65-417 31-383 (393)
95 3ffr_A Phosphoserine aminotran 99.8 1.4E-19 4.9E-24 203.1 16.7 305 517-857 40-361 (362)
96 3n0l_A Serine hydroxymethyltra 99.8 2.9E-18 9.9E-23 196.8 27.3 299 519-859 70-388 (417)
97 2fnu_A Aminotransferase; prote 99.8 6.6E-19 2.2E-23 199.0 21.4 307 522-860 34-372 (375)
98 1j32_A Aspartate aminotransfer 99.8 1E-18 3.4E-23 198.8 23.0 303 516-860 67-387 (388)
99 3dzz_A Putative pyridoxal 5'-p 99.8 8.2E-19 2.8E-23 199.4 21.4 300 519-859 65-388 (391)
100 2cb1_A O-acetyl homoserine sul 99.8 8E-18 2.8E-22 193.5 29.2 325 63-417 29-411 (412)
101 1fc4_A 2-amino-3-ketobutyrate 99.8 6E-19 2E-23 201.6 19.7 292 520-860 90-397 (401)
102 1c4k_A Protein (ornithine deca 99.8 1E-18 3.6E-23 212.7 22.7 314 521-861 174-567 (730)
103 1bs0_A Protein (8-amino-7-oxon 99.8 8.5E-19 2.9E-23 199.1 20.5 289 520-856 84-383 (384)
104 1vjo_A Alanine--glyoxylate ami 99.8 1.1E-17 3.7E-22 190.5 29.3 317 65-416 42-389 (393)
105 3get_A Histidinol-phosphate am 99.8 9.8E-19 3.3E-23 197.2 20.5 281 524-857 69-364 (365)
106 1gd9_A Aspartate aminotransfer 99.8 1.2E-18 4E-23 198.4 21.0 301 516-860 63-386 (389)
107 2vi8_A Serine hydroxymethyltra 99.8 1.8E-18 6.3E-23 197.6 22.6 299 520-860 69-387 (405)
108 3a2b_A Serine palmitoyltransfe 99.8 1.7E-18 5.9E-23 197.7 22.3 295 516-860 84-392 (398)
109 2bwn_A 5-aminolevulinate synth 99.8 2.9E-18 9.9E-23 196.0 24.1 292 520-859 91-399 (401)
110 3tfu_A Adenosylmethionine-8-am 99.8 6.3E-18 2.2E-22 197.0 27.2 300 520-861 118-454 (457)
111 2dkj_A Serine hydroxymethyltra 99.8 3.5E-18 1.2E-22 195.4 24.1 292 525-859 74-387 (407)
112 1v72_A Aldolase; PLP-dependent 99.8 9.5E-19 3.2E-23 196.1 18.7 292 520-860 43-353 (356)
113 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 1.1E-18 3.9E-23 196.7 19.2 280 96-417 50-365 (371)
114 3nra_A Aspartate aminotransfer 99.8 9.7E-19 3.3E-23 200.0 18.7 302 516-860 78-405 (407)
115 4dq6_A Putative pyridoxal phos 99.8 5E-18 1.7E-22 192.9 23.3 298 517-857 68-390 (391)
116 3euc_A Histidinol-phosphate am 99.8 3.7E-18 1.3E-22 192.6 21.9 284 522-857 69-365 (367)
117 2w8t_A SPT, serine palmitoyltr 99.8 1.2E-17 4.1E-22 193.0 26.5 277 94-417 104-410 (427)
118 3a9z_A Selenocysteine lyase; P 99.8 2.5E-17 8.6E-22 190.2 29.1 319 516-862 57-430 (432)
119 2x3l_A ORN/Lys/Arg decarboxyla 99.8 2.6E-19 8.7E-24 208.2 12.2 285 521-859 58-352 (446)
120 3kki_A CAI-1 autoinducer synth 99.8 4.6E-18 1.6E-22 195.1 21.9 285 522-859 106-403 (409)
121 1b5p_A Protein (aspartate amin 99.8 4.8E-18 1.6E-22 193.3 21.9 301 516-858 68-383 (385)
122 3gbx_A Serine hydroxymethyltra 99.8 6.7E-18 2.3E-22 193.7 23.3 297 521-859 77-395 (420)
123 2dou_A Probable N-succinyldiam 99.8 2.1E-18 7.2E-23 195.4 18.8 297 516-857 63-375 (376)
124 3a9z_A Selenocysteine lyase; P 99.8 2.2E-17 7.4E-22 190.7 27.5 294 93-417 55-423 (432)
125 1svv_A Threonine aldolase; str 99.8 3.1E-18 1E-22 192.0 19.8 296 517-859 46-357 (359)
126 1v2d_A Glutamine aminotransfer 99.8 3.9E-18 1.3E-22 193.5 20.5 292 523-862 64-373 (381)
127 3h7f_A Serine hydroxymethyltra 99.8 2.7E-17 9.3E-22 191.2 28.1 297 521-860 91-414 (447)
128 3g0t_A Putative aminotransfera 99.8 6.4E-18 2.2E-22 195.3 22.5 318 516-859 82-436 (437)
129 2fq6_A Cystathionine beta-lyas 99.8 6.2E-17 2.1E-21 186.0 30.3 275 100-417 83-413 (415)
130 2bkw_A Alanine-glyoxylate amin 99.8 8.7E-18 3E-22 190.3 22.8 321 59-417 9-379 (385)
131 2vyc_A Biodegradative arginine 99.8 7.7E-18 2.6E-22 206.9 23.7 306 521-861 206-606 (755)
132 3ecd_A Serine hydroxymethyltra 99.8 3E-17 1E-21 188.6 26.9 295 525-861 83-398 (425)
133 2c81_A Glutamine-2-deoxy-scyll 99.8 3.2E-18 1.1E-22 197.1 18.7 314 520-859 42-413 (418)
134 3dyd_A Tyrosine aminotransfera 99.8 8.9E-18 3.1E-22 194.0 22.4 300 523-861 99-425 (427)
135 1m32_A 2-aminoethylphosphonate 99.8 1.4E-17 4.6E-22 187.1 23.3 319 59-417 8-360 (366)
136 2gb3_A Aspartate aminotransfer 99.8 6.1E-18 2.1E-22 194.1 20.6 299 516-861 79-403 (409)
137 1o4s_A Aspartate aminotransfer 99.8 4.7E-18 1.6E-22 193.7 19.0 293 516-858 78-387 (389)
138 1yiz_A Kynurenine aminotransfe 99.8 9.4E-18 3.2E-22 193.7 21.6 303 516-857 77-426 (429)
139 2z61_A Probable aspartate amin 99.8 7.3E-18 2.5E-22 190.5 19.9 290 516-858 66-369 (370)
140 3hmu_A Aminotransferase, class 99.8 1.1E-16 3.9E-21 187.2 30.6 304 520-861 99-453 (472)
141 3ele_A Amino transferase; RER0 99.8 7.9E-18 2.7E-22 192.1 20.3 301 516-860 76-396 (398)
142 2pb2_A Acetylornithine/succiny 99.8 1E-16 3.5E-21 184.8 29.8 290 520-860 99-418 (420)
143 3get_A Histidinol-phosphate am 99.8 1E-16 3.5E-21 180.6 29.2 298 59-416 35-361 (365)
144 3tqx_A 2-amino-3-ketobutyrate 99.8 2.7E-17 9.2E-22 187.4 24.7 277 95-417 84-391 (399)
145 3frk_A QDTB; aminotransferase, 99.8 3.1E-18 1E-22 193.9 16.7 297 521-859 37-367 (373)
146 3h14_A Aminotransferase, class 99.8 2.5E-17 8.6E-22 187.5 24.3 345 459-860 17-382 (391)
147 3l8a_A METC, putative aminotra 99.8 1E-17 3.5E-22 193.1 21.1 299 519-858 99-420 (421)
148 1u08_A Hypothetical aminotrans 99.8 1E-17 3.5E-22 190.4 20.7 298 516-855 67-385 (386)
149 2oat_A Ornithine aminotransfer 99.8 9.7E-17 3.3E-21 186.1 29.1 288 522-859 120-438 (439)
150 3uwc_A Nucleotide-sugar aminot 99.8 1.3E-17 4.3E-22 188.6 21.1 297 522-859 40-370 (374)
151 3cq5_A Histidinol-phosphate am 99.8 8.8E-17 3E-21 181.7 27.8 283 520-857 73-365 (369)
152 1pff_A Methionine gamma-lyase; 99.8 1.6E-17 5.5E-22 184.7 20.9 273 103-417 2-329 (331)
153 3frk_A QDTB; aminotransferase, 99.8 4.3E-17 1.5E-21 184.5 24.7 279 100-418 37-364 (373)
154 3p1t_A Putative histidinol-pho 99.8 4.7E-17 1.6E-21 181.1 24.2 278 522-858 53-335 (337)
155 2o0r_A RV0858C (N-succinyldiam 99.8 6E-18 2E-22 194.2 17.3 303 516-861 62-397 (411)
156 2x3l_A ORN/Lys/Arg decarboxyla 99.8 1E-17 3.4E-22 194.7 19.3 271 100-417 58-348 (446)
157 2po3_A 4-dehydrase; external a 99.8 4.7E-17 1.6E-21 187.7 24.6 305 522-862 54-388 (424)
158 1gc0_A Methionine gamma-lyase; 99.8 1.7E-16 5.8E-21 181.6 28.9 276 99-416 65-395 (398)
159 3ffh_A Histidinol-phosphate am 99.8 6.8E-16 2.3E-20 173.7 33.4 298 59-416 37-360 (363)
160 3dr4_A Putative perosamine syn 99.8 1.5E-17 5E-22 189.6 19.5 302 521-856 57-389 (391)
161 3b46_A Aminotransferase BNA3; 99.8 1E-17 3.6E-22 194.7 18.4 302 516-856 95-443 (447)
162 3hdo_A Histidinol-phosphate am 99.8 2.8E-17 9.4E-22 185.1 21.3 279 523-858 68-353 (360)
163 2o1b_A Aminotransferase, class 99.8 1.1E-17 3.6E-22 191.9 18.2 298 516-858 85-401 (404)
164 3i5t_A Aminotransferase; pyrid 99.7 2.8E-16 9.4E-21 184.1 30.4 323 520-877 97-470 (476)
165 1mdo_A ARNB aminotransferase; 99.7 2.3E-17 7.9E-22 187.8 20.7 307 522-859 41-385 (393)
166 2c0r_A PSAT, phosphoserine ami 99.7 3.1E-16 1E-20 176.6 29.7 315 58-416 7-355 (362)
167 2zyj_A Alpha-aminodipate amino 99.7 9.7E-18 3.3E-22 191.5 17.3 297 523-862 77-395 (397)
168 1fg7_A Histidinol phosphate am 99.7 7.8E-17 2.7E-21 181.4 24.5 280 523-856 61-354 (356)
169 2bwn_A 5-aminolevulinate synth 99.7 8.7E-17 3E-21 183.7 25.3 274 99-417 91-395 (401)
170 2oga_A Transaminase; PLP-depen 99.7 2E-17 6.9E-22 189.2 20.0 298 521-859 64-395 (399)
171 3qhx_A Cystathionine gamma-syn 99.7 1.5E-16 5E-21 181.8 27.0 274 100-416 67-392 (392)
172 1pff_A Methionine gamma-lyase; 99.7 6.4E-17 2.2E-21 179.8 23.4 280 524-856 2-330 (331)
173 3kax_A Aminotransferase, class 99.7 6.2E-17 2.1E-21 183.3 23.7 297 520-857 63-382 (383)
174 3ezs_A Aminotransferase ASPB; 99.7 3.5E-17 1.2E-21 185.1 21.6 293 516-859 59-374 (376)
175 2vyc_A Biodegradative arginine 99.7 2.9E-17 9.8E-22 201.8 22.1 280 99-417 205-600 (755)
176 3ftb_A Histidinol-phosphate am 99.7 6.9E-17 2.4E-21 181.5 23.3 282 523-858 64-359 (361)
177 3op7_A Aminotransferase class 99.7 3.2E-17 1.1E-21 185.5 20.6 294 523-860 66-371 (375)
178 3piu_A 1-aminocyclopropane-1-c 99.7 5.3E-17 1.8E-21 187.9 22.9 309 516-861 86-433 (435)
179 3jtx_A Aminotransferase; NP_28 99.7 4.6E-17 1.6E-21 185.5 22.0 299 516-857 66-395 (396)
180 2zc0_A Alanine glyoxylate tran 99.7 7.7E-17 2.6E-21 184.4 23.8 304 516-860 75-404 (407)
181 1b9h_A AHBA synthase, protein 99.7 5.3E-17 1.8E-21 184.7 22.2 306 522-859 40-387 (388)
182 1fc4_A 2-amino-3-ketobutyrate 99.7 1.1E-16 3.9E-21 182.6 25.0 273 98-417 89-392 (401)
183 2ord_A Acoat, acetylornithine 99.7 3.7E-16 1.3E-20 178.3 29.2 288 520-859 82-396 (397)
184 2x5d_A Probable aminotransfera 99.7 5.3E-17 1.8E-21 186.4 22.2 301 516-861 75-399 (412)
185 3e77_A Phosphoserine aminotran 99.7 1.6E-17 5.5E-22 187.5 17.1 302 518-859 56-374 (377)
186 1o69_A Aminotransferase; struc 99.7 1.3E-16 4.5E-21 182.2 24.9 308 521-858 33-385 (394)
187 3dod_A Adenosylmethionine-8-am 99.7 4.7E-16 1.6E-20 180.8 29.8 310 520-862 87-445 (448)
188 1xi9_A Putative transaminase; 99.7 2.6E-17 8.9E-22 188.6 18.8 303 516-860 78-403 (406)
189 1qgn_A Protein (cystathionine 99.7 1.3E-16 4.4E-21 184.7 24.6 268 99-416 114-439 (445)
190 3fvs_A Kynurenine--oxoglutarat 99.7 2.6E-17 8.9E-22 189.3 18.8 305 516-859 67-421 (422)
191 1z7d_A Ornithine aminotransfer 99.7 6.8E-16 2.3E-20 178.6 30.7 289 521-860 108-429 (433)
192 1vp4_A Aminotransferase, putat 99.7 3.3E-17 1.1E-21 189.0 19.5 307 516-862 85-420 (425)
193 3n5m_A Adenosylmethionine-8-am 99.7 5.3E-16 1.8E-20 180.5 29.8 308 520-858 91-450 (452)
194 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 2.4E-16 8.3E-21 179.9 26.1 342 28-417 22-438 (450)
195 3gju_A Putative aminotransfera 99.7 9E-16 3.1E-20 179.0 31.5 312 520-861 95-457 (460)
196 2r2n_A Kynurenine/alpha-aminoa 99.7 2.2E-16 7.7E-21 182.1 26.1 305 515-859 77-423 (425)
197 4adb_A Succinylornithine trans 99.7 4E-16 1.4E-20 178.3 27.9 293 521-862 82-402 (406)
198 4e3q_A Pyruvate transaminase; 99.7 3.2E-16 1.1E-20 182.1 27.3 309 522-862 113-470 (473)
199 3acz_A Methionine gamma-lyase; 99.7 5.3E-16 1.8E-20 177.0 28.4 274 100-416 60-387 (389)
200 2eh6_A Acoat, acetylornithine 99.7 4.4E-16 1.5E-20 175.9 27.6 280 522-856 72-374 (375)
201 1bw0_A TAT, protein (tyrosine 99.7 6.1E-17 2.1E-21 185.9 20.6 268 567-860 127-413 (416)
202 1svv_A Threonine aldolase; str 99.7 1.1E-16 3.6E-21 179.4 22.0 306 59-417 18-353 (359)
203 1cs1_A CGS, protein (cystathio 99.7 2.3E-16 7.7E-21 179.6 24.9 274 100-416 53-381 (386)
204 1jg8_A L-ALLO-threonine aldola 99.7 2.9E-17 9.9E-22 183.7 17.0 289 522-859 40-345 (347)
205 3ruy_A Ornithine aminotransfer 99.7 1.3E-15 4.6E-20 173.3 31.1 285 521-857 79-391 (392)
206 3qm2_A Phosphoserine aminotran 99.7 7.9E-18 2.7E-22 191.0 12.4 299 518-859 70-384 (386)
207 1e5e_A MGL, methionine gamma-l 99.7 2.9E-16 1E-20 180.0 25.6 284 521-861 63-396 (404)
208 2z61_A Probable aspartate amin 99.7 3E-16 1E-20 177.3 25.2 322 40-416 16-365 (370)
209 3aow_A Putative uncharacterize 99.7 1.3E-16 4.4E-21 185.5 22.7 305 516-860 118-445 (448)
210 3dxv_A Alpha-amino-epsilon-cap 99.7 4.2E-16 1.4E-20 180.5 26.8 299 518-861 84-426 (439)
211 1s0a_A Adenosylmethionine-8-am 99.7 7.4E-16 2.5E-20 177.8 28.8 301 522-859 88-423 (429)
212 3kki_A CAI-1 autoinducer synth 99.7 5.5E-17 1.9E-21 186.1 19.1 274 95-417 100-399 (409)
213 1iay_A ACC synthase 2, 1-amino 99.7 2.2E-16 7.5E-21 182.2 24.3 306 516-859 83-426 (428)
214 3ly1_A Putative histidinol-pho 99.7 1.4E-15 4.9E-20 170.3 30.2 298 60-417 22-347 (354)
215 1c7n_A Cystalysin; transferase 99.7 3.1E-16 1.1E-20 178.9 25.1 302 519-861 69-394 (399)
216 1v2d_A Glutamine aminotransfer 99.7 6.9E-16 2.4E-20 175.0 27.8 320 42-417 15-366 (381)
217 3ez1_A Aminotransferase MOCR f 99.7 5.8E-16 2E-20 178.3 27.4 357 457-862 10-417 (423)
218 3hdo_A Histidinol-phosphate am 99.7 1.9E-15 6.6E-20 170.0 30.8 299 59-417 31-350 (360)
219 3a2b_A Serine palmitoyltransfe 99.7 4.2E-16 1.4E-20 177.8 25.7 275 95-417 84-387 (398)
220 3nx3_A Acoat, acetylornithine 99.7 1.6E-15 5.4E-20 172.9 30.4 285 520-858 78-393 (395)
221 2c0r_A PSAT, phosphoserine ami 99.7 1.8E-16 6.1E-21 178.5 21.8 298 518-859 47-360 (362)
222 2fnu_A Aminotransferase; prote 99.7 4.7E-16 1.6E-20 175.5 25.1 280 100-417 33-367 (375)
223 1qgn_A Protein (cystathionine 99.7 1.2E-16 4.2E-21 184.9 20.5 282 520-859 114-444 (445)
224 1gc0_A Methionine gamma-lyase; 99.7 3.2E-16 1.1E-20 179.2 23.9 285 520-856 65-397 (398)
225 2rfv_A Methionine gamma-lyase; 99.7 2.1E-16 7.2E-21 180.7 22.1 163 520-705 64-231 (398)
226 4a6r_A Omega transaminase; tra 99.7 1.3E-15 4.5E-20 177.5 29.3 304 520-862 94-451 (459)
227 3uwc_A Nucleotide-sugar aminot 99.7 1.1E-15 3.6E-20 172.8 27.5 279 100-417 39-366 (374)
228 2rfv_A Methionine gamma-lyase; 99.7 8.3E-16 2.8E-20 175.8 26.9 276 99-416 64-394 (398)
229 1w23_A Phosphoserine aminotran 99.7 1.2E-15 4.1E-20 171.3 27.8 319 59-416 7-354 (360)
230 1w23_A Phosphoserine aminotran 99.7 5.5E-17 1.9E-21 182.2 16.4 306 516-859 44-359 (360)
231 3g0t_A Putative aminotransfera 99.7 8.8E-16 3E-20 177.4 26.9 322 59-416 49-431 (437)
232 3n75_A LDC, lysine decarboxyla 99.7 4.6E-16 1.6E-20 187.9 25.2 301 521-861 196-561 (715)
233 3euc_A Histidinol-phosphate am 99.7 6.8E-16 2.3E-20 174.0 24.9 296 60-416 36-362 (367)
234 2gb3_A Aspartate aminotransfer 99.7 2.3E-15 7.9E-20 172.6 29.7 320 40-417 30-397 (409)
235 3e2y_A Kynurenine-oxoglutarate 99.7 8.3E-17 2.9E-21 184.2 17.6 299 516-855 61-408 (410)
236 3b8x_A WBDK, pyridoxamine 5-ph 99.7 7.5E-16 2.6E-20 175.4 25.3 304 522-853 36-389 (390)
237 1j32_A Aspartate aminotransfer 99.7 3.1E-15 1.1E-19 169.9 30.3 326 41-417 18-382 (388)
238 3ppl_A Aspartate aminotransfer 99.7 5.3E-16 1.8E-20 179.0 24.1 304 523-862 81-422 (427)
239 1bs0_A Protein (8-amino-7-oxon 99.7 8.3E-16 2.8E-20 174.4 25.2 273 99-416 84-381 (384)
240 1n8p_A Cystathionine gamma-lya 99.7 6.5E-16 2.2E-20 176.5 24.2 270 100-416 56-389 (393)
241 3qhx_A Cystathionine gamma-syn 99.7 3E-16 1E-20 179.2 21.4 284 520-853 66-391 (392)
242 1lc5_A COBD, L-threonine-O-3-p 99.7 2.7E-16 9.3E-21 177.3 20.8 286 523-861 62-361 (364)
243 1d2f_A MALY protein; aminotran 99.7 8.7E-16 3E-20 174.7 25.1 300 521-860 69-389 (390)
244 2cb1_A O-acetyl homoserine sul 99.7 3.8E-16 1.3E-20 179.5 22.3 295 521-855 57-411 (412)
245 3fdb_A Beta C-S lyase, putativ 99.7 1.4E-16 4.9E-21 180.0 18.3 294 521-859 63-375 (377)
246 3nyt_A Aminotransferase WBPE; 99.7 1.6E-16 5.3E-21 179.6 18.5 294 522-855 37-359 (367)
247 3p1t_A Putative histidinol-pho 99.7 9.9E-15 3.4E-19 162.2 32.9 294 59-416 21-331 (337)
248 3i4j_A Aminotransferase, class 99.7 5.5E-16 1.9E-20 179.0 23.4 309 520-860 72-428 (430)
249 2ctz_A O-acetyl-L-homoserine s 99.7 5.1E-16 1.7E-20 179.0 22.8 145 100-250 59-211 (421)
250 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 7.5E-16 2.6E-20 178.4 24.2 316 521-857 63-433 (437)
251 1cs1_A CGS, protein (cystathio 99.7 1.2E-15 4.1E-20 173.6 25.5 282 521-856 53-383 (386)
252 2x5f_A Aspartate_tyrosine_phen 99.7 4E-16 1.4E-20 180.1 21.4 307 516-860 88-429 (430)
253 4atq_A 4-aminobutyrate transam 99.7 5.2E-15 1.8E-19 171.3 30.2 295 522-859 109-454 (456)
254 1e5e_A MGL, methionine gamma-l 99.7 6.1E-15 2.1E-19 169.0 30.1 270 100-416 63-389 (404)
255 3dzz_A Putative pyridoxal 5'-p 99.7 4.1E-15 1.4E-19 168.7 28.5 306 62-417 35-384 (391)
256 3rq1_A Aminotransferase class 99.7 6.2E-16 2.1E-20 177.7 21.7 302 516-861 80-416 (418)
257 4ao9_A Beta-phenylalanine amin 99.7 7.4E-16 2.5E-20 177.7 22.2 286 524-862 131-448 (454)
258 3i16_A Aluminum resistance pro 99.7 2.8E-16 9.6E-21 180.5 18.6 260 522-820 75-357 (427)
259 3cog_A Cystathionine gamma-lya 99.7 2.2E-15 7.4E-20 172.7 25.9 272 101-416 69-396 (403)
260 1vef_A Acetylornithine/acetyl- 99.7 2.3E-15 8E-20 171.5 25.8 280 520-857 87-394 (395)
261 2cjg_A L-lysine-epsilon aminot 99.7 4.8E-15 1.6E-19 172.3 28.8 297 520-860 101-448 (449)
262 3dr4_A Putative perosamine syn 99.7 1.2E-15 4.1E-20 173.7 23.0 278 100-417 57-388 (391)
263 3i16_A Aluminum resistance pro 99.7 2.9E-16 1E-20 180.4 17.7 243 101-383 75-355 (427)
264 1ax4_A Tryptophanase; tryptoph 99.7 5.3E-16 1.8E-20 181.0 20.0 308 522-862 78-443 (467)
265 3d6k_A Putative aminotransfera 99.7 1.4E-15 4.7E-20 175.3 22.9 354 457-862 17-420 (422)
266 1u08_A Hypothetical aminotrans 99.7 1.4E-14 4.9E-19 164.4 30.7 323 42-416 20-384 (386)
267 1mdo_A ARNB aminotransferase; 99.7 1.1E-15 3.7E-20 173.9 21.4 285 100-417 40-381 (393)
268 3ju7_A Putative PLP-dependent 99.7 1E-15 3.6E-20 173.8 21.1 299 522-859 38-374 (377)
269 3m5u_A Phosphoserine aminotran 99.7 2.4E-16 8.3E-21 177.2 15.5 296 518-859 48-359 (361)
270 3a8u_X Omega-amino acid--pyruv 99.7 4.6E-15 1.6E-19 172.3 26.6 311 519-859 92-446 (449)
271 4dq6_A Putative pyridoxal phos 99.7 1.2E-14 4E-19 165.0 29.2 305 61-416 39-387 (391)
272 2dou_A Probable N-succinyldiam 99.7 2.7E-14 9.4E-19 161.5 32.2 322 40-417 12-373 (376)
273 3ri6_A O-acetylhomoserine sulf 99.7 1.4E-15 4.7E-20 175.4 21.7 294 100-415 83-429 (430)
274 3if2_A Aminotransferase; YP_26 99.7 4.7E-16 1.6E-20 180.2 17.8 312 515-862 82-442 (444)
275 3jzl_A Putative cystathionine 99.7 3E-15 1E-19 171.3 24.0 244 101-384 61-339 (409)
276 3acz_A Methionine gamma-lyase; 99.7 1.3E-15 4.3E-20 173.8 20.9 163 521-707 60-229 (389)
277 3b8x_A WBDK, pyridoxamine 5-ph 99.7 9.9E-15 3.4E-19 166.1 28.2 291 100-416 35-390 (390)
278 1lc5_A COBD, L-threonine-O-3-p 99.7 1.8E-14 6.2E-19 162.3 30.0 296 60-416 30-354 (364)
279 2eh6_A Acoat, acetylornithine 99.7 4E-15 1.4E-19 168.1 24.8 271 101-416 72-372 (375)
280 3ndn_A O-succinylhomoserine su 99.7 3.2E-15 1.1E-19 171.8 24.1 272 101-415 83-413 (414)
281 4ffc_A 4-aminobutyrate aminotr 99.7 1.1E-14 3.6E-19 169.6 28.6 298 519-861 106-450 (453)
282 3nra_A Aspartate aminotransfer 99.7 1.5E-15 5.1E-20 173.5 20.6 277 95-417 78-400 (407)
283 3cq5_A Histidinol-phosphate am 99.7 1.4E-14 4.7E-19 163.7 28.2 264 103-416 73-362 (369)
284 3l44_A Glutamate-1-semialdehyd 99.7 4.2E-15 1.4E-19 171.8 24.4 290 522-862 97-432 (434)
285 1o4s_A Aspartate aminotransfer 99.7 1.4E-14 4.9E-19 164.8 28.1 319 40-416 28-383 (389)
286 1gd9_A Aspartate aminotransfer 99.7 2E-14 7E-19 163.2 29.0 270 103-417 67-381 (389)
287 3oks_A 4-aminobutyrate transam 99.7 7.4E-15 2.5E-19 170.8 25.9 297 520-859 104-450 (451)
288 3jzl_A Putative cystathionine 99.7 1.6E-15 5.5E-20 173.6 19.8 257 522-820 61-340 (409)
289 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 1.2E-14 4.2E-19 163.4 26.4 340 28-417 40-456 (501)
290 3t18_A Aminotransferase class 99.7 1E-15 3.5E-20 175.6 18.2 299 516-861 79-411 (413)
291 1fg7_A Histidinol phosphate am 99.7 4.8E-14 1.7E-18 158.5 31.6 265 102-417 61-353 (356)
292 1xi9_A Putative transaminase; 99.7 9.8E-15 3.4E-19 167.1 26.2 269 103-417 82-398 (406)
293 1yiz_A Kynurenine aminotransfe 99.7 2.8E-14 9.6E-19 164.5 30.1 264 107-417 89-424 (429)
294 3nyt_A Aminotransferase WBPE; 99.7 8E-15 2.7E-19 165.5 24.9 276 101-418 37-360 (367)
295 1sff_A 4-aminobutyrate aminotr 99.7 1.7E-14 5.7E-19 166.0 28.0 299 521-860 85-424 (426)
296 1rv3_A Serine hydroxymethyltra 99.7 4E-16 1.4E-20 183.1 14.5 293 96-417 87-426 (483)
297 3lws_A Aromatic amino acid bet 99.7 1.4E-15 4.9E-20 170.6 18.5 290 522-856 49-355 (357)
298 2fyf_A PSAT, phosphoserine ami 99.7 8.7E-15 3E-19 167.1 25.2 323 60-416 45-392 (398)
299 2o0r_A RV0858C (N-succinyldiam 99.7 2.9E-14 9.8E-19 163.5 29.6 266 107-417 74-391 (411)
300 3fq8_A Glutamate-1-semialdehyd 99.7 1.1E-14 3.6E-19 168.1 25.9 288 521-859 93-426 (427)
301 3n75_A LDC, lysine decarboxyla 99.6 1.8E-15 6.3E-20 182.7 19.9 273 99-416 195-554 (715)
302 3cog_A Cystathionine gamma-lya 99.6 4.3E-15 1.5E-19 170.2 22.1 282 522-857 69-399 (403)
303 2eo5_A 419AA long hypothetical 99.6 2E-14 7E-19 165.4 27.8 287 521-859 87-417 (419)
304 3ndn_A O-succinylhomoserine su 99.6 2.4E-15 8.2E-20 172.8 19.7 211 521-777 82-298 (414)
305 3ftb_A Histidinol-phosphate am 99.6 2E-14 7E-19 161.2 26.9 293 60-416 32-355 (361)
306 2fq6_A Cystathionine beta-lyas 99.6 9.6E-16 3.3E-20 176.1 16.2 284 521-855 83-413 (415)
307 3dyd_A Tyrosine aminotransfera 99.6 2.6E-14 8.8E-19 165.0 28.0 273 102-417 99-419 (427)
308 3ezs_A Aminotransferase ASPB; 99.6 3.8E-14 1.3E-18 160.0 28.7 303 60-417 29-370 (376)
309 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.6 1.2E-14 4.3E-19 168.1 25.1 297 100-416 63-430 (437)
310 2oga_A Transaminase; PLP-depen 99.6 1.6E-14 5.5E-19 165.0 25.6 279 100-417 64-391 (399)
311 1b5p_A Protein (aspartate amin 99.6 1.3E-13 4.3E-18 156.8 32.4 324 40-417 18-380 (385)
312 2vi8_A Serine hydroxymethyltra 99.6 2.1E-15 7.2E-20 172.2 17.7 274 103-417 73-382 (405)
313 3fvs_A Kynurenine--oxoglutarat 99.6 2.6E-14 8.8E-19 164.2 26.9 309 59-416 33-416 (422)
314 1v72_A Aldolase; PLP-dependent 99.6 2.9E-14 9.8E-19 159.5 26.5 272 100-417 44-348 (356)
315 2ez2_A Beta-tyrosinase, tyrosi 99.6 2.7E-15 9.1E-20 174.6 18.7 302 522-862 77-433 (456)
316 1uu1_A Histidinol-phosphate am 99.6 9.8E-14 3.4E-18 154.4 30.6 293 58-417 23-333 (335)
317 4e77_A Glutamate-1-semialdehyd 99.6 2.1E-14 7.1E-19 165.8 25.9 288 521-858 94-427 (429)
318 2x5d_A Probable aminotransfera 99.6 8.2E-14 2.8E-18 159.7 30.7 322 41-417 25-393 (412)
319 3b46_A Aminotransferase BNA3; 99.6 3.6E-14 1.2E-18 164.7 27.8 304 60-417 63-442 (447)
320 2o1b_A Aminotransferase, class 99.6 1.8E-14 6.2E-19 164.9 24.7 304 60-417 53-398 (404)
321 3op7_A Aminotransferase class 99.6 2.3E-14 7.8E-19 162.0 25.2 271 103-417 67-366 (375)
322 1b9h_A AHBA synthase, protein 99.6 2.5E-14 8.6E-19 162.5 25.5 280 100-416 39-382 (388)
323 3n0l_A Serine hydroxymethyltra 99.6 1.3E-14 4.4E-19 166.3 23.0 274 102-417 74-384 (417)
324 3h14_A Aminotransferase, class 99.6 1.3E-13 4.4E-18 156.8 31.2 322 39-417 17-377 (391)
325 1bw0_A TAT, protein (tyrosine 99.6 4.1E-14 1.4E-18 162.3 27.2 274 103-417 79-408 (416)
326 3kax_A Aminotransferase, class 99.6 2.8E-14 9.7E-19 161.3 25.5 304 61-416 31-379 (383)
327 3piu_A 1-aminocyclopropane-1-c 99.6 3.2E-14 1.1E-18 164.4 26.4 273 103-417 90-427 (435)
328 3e2y_A Kynurenine-oxoglutarate 99.6 3.8E-14 1.3E-18 162.1 26.6 306 59-417 28-408 (410)
329 3k28_A Glutamate-1-semialdehyd 99.6 9.3E-15 3.2E-19 168.7 21.7 291 522-860 95-427 (429)
330 1uu1_A Histidinol-phosphate am 99.6 2.8E-15 9.7E-20 167.0 16.7 268 523-856 59-334 (335)
331 3qgu_A LL-diaminopimelate amin 99.6 5.4E-15 1.9E-19 171.6 19.7 293 524-859 115-439 (449)
332 1n8p_A Cystathionine gamma-lya 99.6 2.9E-15 9.9E-20 171.1 17.0 281 521-856 56-391 (393)
333 2aeu_A Hypothetical protein MJ 99.6 5.5E-15 1.9E-19 167.6 19.0 285 523-861 61-372 (374)
334 2dkj_A Serine hydroxymethyltra 99.6 3E-15 1E-19 171.0 16.8 271 104-417 74-383 (407)
335 2po3_A 4-dehydrase; external a 99.6 5.4E-14 1.9E-18 162.0 27.2 277 100-417 53-381 (424)
336 3hvy_A Cystathionine beta-lyas 99.6 5.2E-15 1.8E-19 170.0 18.5 259 522-819 76-356 (427)
337 2fyf_A PSAT, phosphoserine ami 99.6 6.5E-15 2.2E-19 168.2 19.2 302 519-859 77-397 (398)
338 3f6t_A Aspartate aminotransfer 99.6 2.4E-14 8.2E-19 170.0 24.7 327 516-862 138-527 (533)
339 3ei9_A LL-diaminopimelate amin 99.6 6.4E-15 2.2E-19 170.1 19.2 299 516-856 98-424 (432)
340 3tcm_A Alanine aminotransferas 99.6 1.9E-14 6.4E-19 169.7 23.5 314 515-862 133-496 (500)
341 3fkd_A L-threonine-O-3-phospha 99.6 3E-13 1E-17 151.3 32.2 295 61-416 22-336 (350)
342 2c81_A Glutamine-2-deoxy-scyll 99.6 3.1E-14 1.1E-18 163.6 24.6 292 96-417 39-409 (418)
343 2a7v_A Serine hydroxymethyltra 99.6 1.4E-14 4.9E-19 169.0 21.9 286 103-417 104-436 (490)
344 3nmy_A Xometc, cystathionine g 99.6 2.2E-14 7.5E-19 164.1 22.9 272 101-416 69-397 (400)
345 1ibj_A CBL, cystathionine beta 99.6 5.3E-15 1.8E-19 172.3 17.9 163 521-707 134-302 (464)
346 3ecd_A Serine hydroxymethyltra 99.6 1.3E-14 4.5E-19 166.5 20.9 273 104-417 83-392 (425)
347 3ri6_A O-acetylhomoserine sulf 99.6 1.5E-14 5.2E-19 166.7 20.9 144 521-684 83-231 (430)
348 2oqx_A Tryptophanase; lyase, p 99.6 1.5E-15 5.1E-20 177.2 12.6 309 522-862 76-444 (467)
349 1ibj_A CBL, cystathionine beta 99.6 9E-15 3.1E-19 170.4 19.0 162 100-271 134-302 (464)
350 3pj0_A LMO0305 protein; struct 99.6 5.2E-15 1.8E-19 166.1 16.4 292 521-856 49-358 (359)
351 3ele_A Amino transferase; RER0 99.6 9E-14 3.1E-18 158.4 26.8 272 103-417 84-391 (398)
352 1zod_A DGD, 2,2-dialkylglycine 99.6 1.8E-13 6.2E-18 157.9 29.7 301 520-860 85-432 (433)
353 3ht4_A Aluminum resistance pro 99.6 1.4E-14 4.8E-19 167.1 20.2 256 522-819 67-345 (431)
354 3fdb_A Beta C-S lyase, putativ 99.6 1.5E-14 5.1E-19 163.4 20.1 270 104-417 63-371 (377)
355 3l8a_A METC, putative aminotra 99.6 5.1E-14 1.7E-18 162.1 24.8 307 60-417 67-417 (421)
356 3ruy_A Ornithine aminotransfer 99.6 2.2E-14 7.7E-19 163.1 21.5 275 100-416 79-388 (392)
357 3gbx_A Serine hydroxymethyltra 99.6 9.9E-15 3.4E-19 167.3 18.7 275 101-417 78-391 (420)
358 1iay_A ACC synthase 2, 1-amino 99.6 4.9E-14 1.7E-18 162.4 24.2 273 102-416 86-421 (428)
359 3jtx_A Aminotransferase; NP_28 99.6 2.8E-13 9.4E-18 154.1 30.0 305 60-416 36-392 (396)
360 2zyj_A Alpha-aminodipate amino 99.6 1.5E-14 5.1E-19 165.0 19.4 272 102-417 77-388 (397)
361 3qgu_A LL-diaminopimelate amin 99.6 7.6E-14 2.6E-18 161.9 25.7 330 39-416 53-434 (449)
362 2ctz_A O-acetyl-L-homoserine s 99.6 4.5E-14 1.6E-18 162.7 23.6 145 521-685 59-210 (421)
363 1o69_A Aminotransferase; struc 99.6 5.7E-14 1.9E-18 160.2 23.8 278 100-416 33-381 (394)
364 1jg8_A L-ALLO-threonine aldola 99.6 2.5E-14 8.6E-19 159.7 20.4 271 101-416 40-340 (347)
365 4f4e_A Aromatic-amino-acid ami 99.6 6.9E-15 2.4E-19 169.3 15.9 300 515-857 91-419 (420)
366 3ei9_A LL-diaminopimelate amin 99.6 9.7E-14 3.3E-18 160.2 24.8 336 39-417 40-423 (432)
367 1ohv_A 4-aminobutyrate aminotr 99.6 1.8E-13 6E-18 160.1 27.0 289 521-859 111-470 (472)
368 2ay1_A Aroat, aromatic amino a 99.6 3.2E-15 1.1E-19 170.2 11.6 290 524-856 73-392 (394)
369 2epj_A Glutamate-1-semialdehyd 99.6 4.2E-13 1.4E-17 155.1 28.8 292 520-860 96-431 (434)
370 2zc0_A Alanine glyoxylate tran 99.6 9.6E-14 3.3E-18 158.6 22.7 270 103-417 79-399 (407)
371 1c7n_A Cystalysin; transferase 99.6 5.6E-13 1.9E-17 151.8 28.9 271 103-417 70-388 (399)
372 3fkd_A L-threonine-O-3-phospha 99.6 6.2E-14 2.1E-18 156.9 20.5 276 524-859 54-341 (350)
373 1vef_A Acetylornithine/acetyl- 99.6 5.8E-14 2E-18 159.9 20.4 274 100-416 88-391 (395)
374 3g7q_A Valine-pyruvate aminotr 99.6 3.3E-14 1.1E-18 163.0 18.4 308 515-862 74-415 (417)
375 1ajs_A Aspartate aminotransfer 99.6 2.2E-14 7.4E-19 164.4 16.9 250 569-859 131-410 (412)
376 1yaa_A Aspartate aminotransfer 99.6 1.9E-14 6.5E-19 165.0 16.3 297 516-859 73-410 (412)
377 3ez1_A Aminotransferase MOCR f 99.6 2E-13 6.8E-18 157.0 24.8 329 37-417 10-410 (423)
378 3ihj_A Alanine aminotransferas 99.6 4.8E-14 1.6E-18 166.0 19.8 314 515-862 128-495 (498)
379 3fsl_A Aromatic-amino-acid ami 99.6 2.8E-14 9.7E-19 162.4 17.1 298 516-856 70-396 (397)
380 3hvy_A Cystathionine beta-lyas 99.6 6.5E-14 2.2E-18 160.8 19.6 243 101-383 76-355 (427)
381 3aow_A Putative uncharacterize 99.6 4.2E-13 1.4E-17 155.9 26.2 271 103-417 122-440 (448)
382 3b1d_A Betac-S lyase; HET: PLP 99.3 3.4E-16 1.2E-20 178.4 0.0 299 520-858 70-391 (392)
383 7aat_A Aspartate aminotransfer 99.5 4.8E-14 1.6E-18 160.9 17.6 300 516-857 71-400 (401)
384 2cy8_A D-phgat, D-phenylglycin 99.5 1.5E-12 5.1E-17 151.3 30.5 295 520-869 97-442 (453)
385 4adb_A Succinylornithine trans 99.5 4.4E-13 1.5E-17 153.0 25.3 276 100-417 82-395 (406)
386 1vp4_A Aminotransferase, putat 99.5 1.5E-13 5.1E-18 158.4 21.2 272 103-417 89-413 (425)
387 2q7w_A Aspartate aminotransfer 99.5 1.9E-14 6.4E-19 163.8 13.4 268 542-856 100-395 (396)
388 1d2f_A MALY protein; aminotran 99.5 1.1E-12 3.8E-17 149.0 27.3 302 60-416 34-383 (390)
389 2x5f_A Aspartate_tyrosine_phen 99.5 5.3E-13 1.8E-17 153.8 24.0 276 103-417 92-424 (430)
390 3asa_A LL-diaminopimelate amin 99.5 1.5E-12 5.1E-17 148.7 27.4 328 39-418 17-389 (400)
391 4eu1_A Mitochondrial aspartate 99.5 1.6E-13 5.6E-18 157.1 19.3 249 567-857 130-408 (409)
392 3asa_A LL-diaminopimelate amin 99.5 7.5E-14 2.6E-18 159.5 15.7 296 523-861 78-394 (400)
393 3meb_A Aspartate aminotransfer 99.5 3.7E-13 1.3E-17 156.3 21.5 288 524-858 98-442 (448)
394 3nmy_A Xometc, cystathionine g 99.5 3.5E-13 1.2E-17 154.0 20.7 210 521-777 68-285 (400)
395 3ju7_A Putative PLP-dependent 99.5 2.1E-13 7.2E-18 154.7 17.9 278 101-418 38-371 (377)
396 2ord_A Acoat, acetylornithine 99.5 2.5E-13 8.7E-18 154.8 18.6 275 100-417 83-392 (397)
397 4a0g_A Adenosylmethionine-8-am 99.5 5.4E-13 1.9E-17 165.0 22.0 339 481-859 393-827 (831)
398 3nx3_A Acoat, acetylornithine 99.5 9.5E-12 3.2E-16 141.6 30.6 275 100-417 79-390 (395)
399 3h7f_A Serine hydroxymethyltra 99.5 7E-13 2.4E-17 153.9 21.4 276 100-417 91-409 (447)
400 2yky_A Beta-transaminase; tran 99.2 2.2E-15 7.6E-20 174.8 0.0 321 481-862 113-462 (465)
401 2aeu_A Hypothetical protein MJ 99.5 1.5E-12 5.2E-17 147.5 22.9 301 57-417 32-366 (374)
402 2e7u_A Glutamate-1-semialdehyd 99.5 5.6E-12 1.9E-16 145.1 27.3 284 520-856 92-423 (424)
403 3ppl_A Aspartate aminotransfer 99.5 2.7E-12 9.1E-17 147.9 24.5 272 102-417 81-415 (427)
404 3rq1_A Aminotransferase class 99.5 6.7E-12 2.3E-16 144.0 27.4 332 38-417 21-410 (418)
405 3g7q_A Valine-pyruvate aminotr 99.5 7.2E-12 2.5E-16 143.4 27.2 273 103-417 79-408 (417)
406 3ht4_A Aluminum resistance pro 99.4 1.3E-12 4.6E-17 150.5 19.0 245 101-383 67-344 (431)
407 2r2n_A Kynurenine/alpha-aminoa 99.4 1.5E-11 5E-16 141.7 27.2 280 95-417 78-419 (425)
408 2pb2_A Acetylornithine/succiny 99.4 7.3E-12 2.5E-16 144.1 24.5 276 100-417 100-413 (420)
409 3t18_A Aminotransferase class 99.4 8.8E-12 3E-16 142.7 25.1 332 38-416 20-408 (413)
410 3lws_A Aromatic amino acid bet 99.4 4.3E-12 1.5E-16 142.2 20.8 304 56-416 12-353 (357)
411 2oat_A Ornithine aminotransfer 99.4 6.2E-12 2.1E-16 145.6 22.7 273 101-417 120-434 (439)
412 1z7d_A Ornithine aminotransfer 99.4 1.2E-11 4.1E-16 142.9 24.6 275 101-417 109-424 (433)
413 3if2_A Aminotransferase; YP_26 99.4 7E-12 2.4E-16 145.0 22.1 274 102-417 86-435 (444)
414 2ez2_A Beta-tyrosinase, tyrosi 99.4 1.1E-11 3.7E-16 144.0 22.7 271 101-417 77-426 (456)
415 2zy4_A L-aspartate beta-decarb 99.4 7.4E-12 2.5E-16 148.8 21.2 281 567-862 193-524 (546)
416 3tcm_A Alanine aminotransferas 99.4 1.3E-11 4.4E-16 145.3 22.6 280 94-417 133-489 (500)
417 3bwn_A AT1G70560, L-tryptophan 99.4 5.4E-13 1.9E-17 152.1 10.1 241 570-859 121-386 (391)
418 1s0a_A Adenosylmethionine-8-am 99.4 2.4E-11 8E-16 140.0 23.3 279 102-417 89-419 (429)
419 7aat_A Aspartate aminotransfer 99.4 8.5E-12 2.9E-16 142.2 19.1 275 102-416 74-397 (401)
420 3pj0_A LMO0305 protein; struct 99.4 1.1E-11 3.8E-16 138.9 18.1 305 57-416 16-356 (359)
421 3fsl_A Aromatic-amino-acid ami 99.3 3.2E-11 1.1E-15 137.0 21.6 272 103-416 74-394 (397)
422 3d6k_A Putative aminotransfera 99.3 4.8E-11 1.6E-15 137.3 22.9 326 37-417 17-413 (422)
423 1ajs_A Aspartate aminotransfer 99.3 1.1E-11 3.6E-16 141.9 16.9 272 102-417 77-406 (412)
424 2cjg_A L-lysine-epsilon aminot 99.3 2.6E-11 9E-16 140.7 20.5 278 101-417 103-443 (449)
425 3a8u_X Omega-amino acid--pyruv 99.3 3E-11 1E-15 140.0 20.2 288 100-417 94-442 (449)
426 2ay1_A Aroat, aromatic amino a 99.3 6.3E-12 2.2E-16 142.8 13.6 271 103-416 73-390 (394)
427 3dxv_A Alpha-amino-epsilon-cap 99.3 1E-10 3.5E-15 135.1 23.1 277 99-417 86-420 (439)
428 3k7y_A Aspartate aminotransfer 99.3 2.3E-11 8E-16 139.1 16.9 299 515-859 71-404 (405)
429 1ax4_A Tryptophanase; tryptoph 99.3 1.3E-10 4.4E-15 135.3 22.9 275 101-417 78-436 (467)
430 4f4e_A Aromatic-amino-acid ami 99.3 6.4E-11 2.2E-15 136.0 19.9 270 103-416 96-416 (420)
431 1yaa_A Aspartate aminotransfer 99.3 3.6E-11 1.2E-15 137.5 17.1 269 102-416 76-405 (412)
432 3ihj_A Alanine aminotransferas 99.3 2.6E-10 9E-15 134.0 24.8 276 94-417 128-488 (498)
433 3bwn_A AT1G70560, L-tryptophan 99.3 7.7E-11 2.6E-15 134.2 19.6 272 102-418 71-383 (391)
434 3f6t_A Aspartate aminotransfer 99.3 4.9E-10 1.7E-14 132.9 26.6 283 117-417 165-520 (533)
435 1sff_A 4-aminobutyrate aminotr 99.3 3.2E-10 1.1E-14 130.1 24.2 276 100-417 85-419 (426)
436 3tfu_A Adenosylmethionine-8-am 99.3 2.5E-10 8.6E-15 132.7 22.6 283 101-417 120-448 (457)
437 2eo5_A 419AA long hypothetical 99.2 3.6E-10 1.2E-14 129.8 23.2 266 102-417 89-413 (419)
438 3meb_A Aspartate aminotransfer 99.2 3.7E-10 1.3E-14 131.0 23.2 271 102-416 97-438 (448)
439 1zod_A DGD, 2,2-dialkylglycine 99.2 2.2E-10 7.7E-15 131.9 21.0 278 101-417 87-427 (433)
440 4eu1_A Mitochondrial aspartate 99.2 1.9E-10 6.7E-15 131.4 20.1 274 103-416 83-405 (409)
441 3i4j_A Aminotransferase, class 99.2 5.9E-10 2E-14 128.3 23.6 282 101-417 74-423 (430)
442 4ffc_A 4-aminobutyrate aminotr 99.2 9.2E-10 3.2E-14 127.8 25.2 276 101-417 109-444 (453)
443 3dod_A Adenosylmethionine-8-am 99.2 9.1E-10 3.1E-14 127.6 24.7 283 101-417 89-438 (448)
444 3gju_A Putative aminotransfera 99.2 1E-09 3.4E-14 127.8 25.0 287 100-417 96-451 (460)
445 3i5t_A Aminotransferase; pyrid 99.2 2.3E-10 8E-15 133.7 19.2 285 100-417 98-449 (476)
446 3b1d_A Betac-S lyase; HET: PLP 98.8 1.3E-12 4.5E-17 148.6 0.0 272 103-417 70-388 (392)
447 3n5m_A Adenosylmethionine-8-am 99.2 1.1E-09 3.7E-14 127.1 23.8 283 100-417 92-447 (452)
448 2oqx_A Tryptophanase; lyase, p 99.2 5.6E-11 1.9E-15 138.3 12.1 269 102-417 77-437 (467)
449 4a6r_A Omega transaminase; tra 99.2 9.3E-10 3.2E-14 128.0 21.4 281 101-417 96-444 (459)
450 2q7w_A Aspartate aminotransfer 99.2 1E-10 3.4E-15 132.9 12.9 273 102-416 72-393 (396)
451 3hmu_A Aminotransferase, class 99.2 1.9E-09 6.6E-14 125.8 24.0 280 101-417 101-447 (472)
452 3oks_A 4-aminobutyrate transam 99.2 7.3E-09 2.5E-13 120.2 28.3 275 101-416 106-445 (451)
453 2cy8_A D-phgat, D-phenylglycin 99.1 3.6E-09 1.2E-13 122.7 25.4 272 102-417 100-430 (453)
454 2epj_A Glutamate-1-semialdehyd 99.1 6.4E-10 2.2E-14 128.2 17.0 272 101-417 98-426 (434)
455 4h51_A Aspartate aminotransfer 99.1 1.5E-09 5.3E-14 124.2 19.9 264 566-862 135-419 (420)
456 3l44_A Glutamate-1-semialdehyd 99.1 7.5E-10 2.6E-14 127.6 17.5 272 102-417 98-425 (434)
457 3fq8_A Glutamate-1-semialdehyd 99.1 1.3E-09 4.5E-14 125.3 19.3 273 102-417 95-422 (427)
458 2hox_A ALLIIN lyase 1; cystein 99.1 1.8E-09 6.2E-14 124.4 20.4 268 101-416 102-419 (427)
459 4e77_A Glutamate-1-semialdehyd 99.1 2.1E-09 7.2E-14 123.7 20.4 275 101-417 95-424 (429)
460 3ou5_A Serine hydroxymethyltra 99.1 1.8E-09 6E-14 121.2 17.2 285 104-416 105-435 (490)
461 2hox_A ALLIIN lyase 1; cystein 99.1 1.5E-10 5.2E-15 133.4 7.9 238 567-857 154-422 (427)
462 2e7u_A Glutamate-1-semialdehyd 99.0 1.5E-09 5.3E-14 124.6 16.2 271 101-416 94-421 (424)
463 3k28_A Glutamate-1-semialdehyd 99.0 4.7E-09 1.6E-13 120.8 19.2 269 102-417 96-422 (429)
464 1ohv_A 4-aminobutyrate aminotr 99.0 7.8E-09 2.7E-13 120.6 18.7 267 106-417 117-466 (472)
465 2zy4_A L-aspartate beta-decarb 98.9 8.5E-08 2.9E-12 113.8 26.2 288 116-417 165-517 (546)
466 4ao9_A Beta-phenylalanine amin 98.9 5.2E-08 1.8E-12 112.3 19.0 270 104-417 132-441 (454)
467 4atq_A 4-aminobutyrate transam 98.6 5E-06 1.7E-10 96.0 27.1 274 103-417 111-450 (456)
468 2yky_A Beta-transaminase; tran 98.1 3.1E-09 1.1E-13 123.2 0.0 274 100-417 141-455 (465)
469 3k7y_A Aspartate aminotransfer 98.4 8.7E-06 3E-10 92.8 20.0 305 59-416 34-399 (405)
470 4e3q_A Pyruvate transaminase; 98.4 1.9E-05 6.6E-10 91.4 22.9 286 103-430 115-470 (473)
471 4h51_A Aspartate aminotransfer 98.3 3.8E-05 1.3E-09 87.7 22.1 276 103-416 91-411 (420)
472 4a0g_A Adenosylmethionine-8-am 97.9 0.00027 9.4E-09 87.4 21.1 44 373-417 780-823 (831)
473 4dik_A Flavoprotein; TM0755, e 32.0 80 0.0027 35.1 7.6 114 525-642 221-343 (410)
474 3ezx_A MMCP 1, monomethylamine 29.4 4.3E+02 0.015 26.1 11.9 65 585-655 116-184 (215)
475 2yxb_A Coenzyme B12-dependent 28.2 1.3E+02 0.0043 28.6 7.3 61 585-653 42-105 (161)
476 1xrs_B D-lysine 5,6-aminomutas 23.9 69 0.0024 33.3 4.7 99 143-244 120-242 (262)
477 2o1e_A YCDH; alpha-beta protei 23.5 5.7E+02 0.02 26.8 12.2 74 568-651 190-265 (312)
478 3iwp_A Copper homeostasis prot 21.3 6E+02 0.021 26.5 11.3 59 623-689 183-249 (287)
479 1x60_A Sporulation-specific N- 20.5 1.2E+02 0.004 24.7 4.7 45 373-417 23-68 (79)
480 3gi1_A LBP, laminin-binding pr 20.3 4.6E+02 0.016 27.1 10.5 77 567-653 178-256 (286)
No 1
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=100.00 E-value=3e-57 Score=527.39 Aligned_cols=407 Identities=35% Similarity=0.542 Sum_probs=369.5
Q ss_pred CccccCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCc-ceeecCCCCCCCCCcHHHHHHHHh
Q 002263 1 MSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIME 78 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~-~~~~~G~g~~~~~~p~~i~~~i~~ 78 (946)
||++||++|+||||++ ||+++ ++ +++|| +++||.+++++|+.++++|.. +.+|+|.|+|+++.|+.+ +++++
T Consensus 14 ml~~~g~~~~~~~~~~-~p~~~~~~-~~~lp---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~p~~v-~~~~~ 87 (438)
T 1wyu_A 14 MLRRVGAASLEDLFAH-LPKEILSP-PIDLP---EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVV-QALAA 87 (438)
T ss_dssp HHHHHTCSSTGGGGTT-SCGGGSSC-CCCCC---CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHHH-HHHHT
T ss_pred HHHHcCCCCHHHHHHh-CcHHHhcC-CCCCC---CCCCHHHHHHHHHHHHhcCcCccccccCCCccCCcCcHHH-HHHHh
Confidence 9999999999999998 99999 77 88997 799999999999999999987 888999999999999998 58888
Q ss_pred CCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHH
Q 002263 79 NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTID 158 (946)
Q Consensus 79 ~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~ 158 (946)
+++||+.|+|||++++||.++.+.++|+++++++|++++++++++|+|+++|++++++++. +||+||++...|+++..
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~--~gd~Viv~~~~h~s~~~ 165 (438)
T 1wyu_A 88 RGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRET--GRMGVLVSQGVHPEYRA 165 (438)
T ss_dssp SHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHH--TCCEEEEETTSCHHHHH
T ss_pred cchhhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcC--CCCEEEEcCccCHhHHH
Confidence 8899999999999999999999999999999999999888899999999999998886654 78999999999999999
Q ss_pred HHHHhhcCCCeEEEEecccc----ccccCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCC
Q 002263 159 ICITRADGFDIKVVVSDLKD----IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGE 234 (946)
Q Consensus 159 ~~~~~a~~~gi~v~~~~~~~----l~~i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~ 234 (946)
+|+.+++..|++++.++.++ +++++++|++|++++||.+|.+.|+++|+++||++|++++|++|..+++.+..+++
T Consensus 166 ~~~~~a~~~G~~v~~v~~~~~~~d~~~i~~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~ 245 (438)
T 1wyu_A 166 VLRAYLEAVGAKLLTLPLEGGRTPLPEVGEEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGA 245 (438)
T ss_dssp HHHHHHHHTTCEEEEECCBTTBCCCCCCCTTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHH
T ss_pred HHHHHHHHCCCEEEEEcCcCCccCHHHhCCCeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCcc
Confidence 99888888899999998643 22256789999999999999999999999999999999998777667777666788
Q ss_pred ccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 235 LGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 235 ~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
+|+|++++|+|+|+.|+++|||++|++++++++++++|++++|.+.|..+.+.|.+++|+|++++||+++|+|+|+++.+
T Consensus 246 ~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~ 325 (438)
T 1wyu_A 246 YGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQL 325 (438)
T ss_dssp HTCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHH
T ss_pred CCCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHH
Confidence 99999999999999999999999999999999999999999999888777788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC-CCcCeEEEecCC-HHHHHHHHHHcCCee--ee
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNL--RV 389 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~-~~~~~~~i~~~~-~~~v~~~L~~~GI~~--~~ 389 (946)
.++.+++|+.+++++|++++.++.++++++++++|+++ | +++..+ +++..+.+..+. +.++.++|.++||.+ +.
T Consensus 326 ~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~ 404 (438)
T 1wyu_A 326 TALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPG-VRPFTPKPFFNEFALALPKDPEAVRRALAERGFHGATPV 404 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT-CEECSCSSBCSEEEEECSSCHHHHHHHHHHTTCCCCEEC
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEECCCCCeEEEEEEeCCCCHHHHHHHHHHCCceecccc
Confidence 99988888899999999999999999999999999998 7 998864 567777777654 889999999999998 32
Q ss_pred e---cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 V---DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ~---~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
- .++.+|+|+++++|++|+++++++|+
T Consensus 405 ~~~~~~~~lRis~~~~~t~edi~~~~~~l~ 434 (438)
T 1wyu_A 405 PREYGENLALFAATELHEEEDLLALREALK 434 (438)
T ss_dssp CTTSCSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ccccCCCeEEEEecccCCHHHHHHHHHHHH
Confidence 2 26789999999999999999999986
No 2
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=100.00 E-value=3.8e-54 Score=506.24 Aligned_cols=438 Identities=39% Similarity=0.710 Sum_probs=362.5
Q ss_pred cCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccc
Q 002263 435 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQ 514 (946)
Q Consensus 435 ~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~ 514 (946)
.||++++|++++ .+| ++||.|++|++++|+++|.+.++++++||+|+++.++.+......+ |..||||++.+.
T Consensus 29 ~~p~~~~~~~~~-~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p~v~~~~~~~--~~~~~~~~~~~~ 101 (474)
T 1wyu_B 29 LIPKEHLREVPP-RLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARL--FADLHPYQDPRT 101 (474)
T ss_dssp HSCGGGBCSSCC-CCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHT--TSSCCTTSCGGG
T ss_pred cCCHHHhccCCC-CCC----CCCHHHHHHHHHHHHhCCCCcccCccccccccccCCHHHHHHHHHH--HHhcCCCCchhh
Confidence 499999999876 776 6999999999999999999888889999999998877664443443 667999998448
Q ss_pred cccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCC-CCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~-~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+||..+++.++++++++++|++...+++++|++++++++++++.|+.++|+ .++++||++.++|+++..++.+.|++++
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv 181 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVR 181 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEE
Confidence 999999999999999999999977678899999998888888887666775 5677999999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
.++++++|.+|+++|+++++ ++|++|++++||++|.+..++++|+++||++|+++|+|+++.....+..+++++|+|
T Consensus 182 ~v~~~~~~~~d~~~L~~~i~---~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~d 258 (474)
T 1wyu_B 182 EIPSGPEGEVDLEALKRELG---PHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFD 258 (474)
T ss_dssp EECBCTTSSBCHHHHHHHCS---TTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCS
T ss_pred EecCCCCCCcCHHHHHHhhC---CCceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCc
Confidence 99998889999999999996 789999999999999983279999999999999999999987655555677888999
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC-CC-CCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~-d~-~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
++++|+||+|+.|+|+||||+|++++++++.++++++.++..+ .+ ....++.......+ .+++.+.+.++|+++..+
T Consensus 259 i~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~aa~~~l~~~ 337 (474)
T 1wyu_B 259 VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRS-FYGNFLALVRAWAYIRTL 337 (474)
T ss_dssp EEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSS-TTSCHHHHHHHHHHHHHH
T ss_pred EEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCccccc-CcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888754432110 00 00000100011111 123456677889999999
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC--
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-- 828 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p-- 828 (946)
|.+++++..++...+++|+.++|++. +++.+. +..+|++++++. .+.+..+++++|.++||+++...||
T Consensus 338 g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~~~~~-----~~~~~~~l~~~L~~~Gi~~~~~~~~~~ 409 (474)
T 1wyu_B 338 GLEGLKKAAALAVLNARYLKELLKEKGYRVPYD---GPSMHEFVAQPP-----EGFRALDLAKGLLELGFHPPTVYFPLI 409 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSC---SSCCSCEEEBCS-----TTCCHHHHHHHHHHTTCCCCEESCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcEecCC---CCcceEEEEEcC-----CCCCHHHHHHHHHHCCccccccccccc
Confidence 99999999999999999999999885 444332 235667788762 2568899999999999998766676
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhccCCCCCCccCCCCCCCCCcccccccCCCcccC
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRF 908 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (946)
..+.+||+++..+|++|+|+++++|++++++ +|+.|++|||++
T Consensus 410 ~~~~lRis~~~~~t~e~id~~~~~L~~~~~~-----------~~~~l~~~p~~~-------------------------- 452 (474)
T 1wyu_B 410 VKEALMVEPTETEAKETLEAFAEAMGALLKK-----------PKEWLENAPYST-------------------------- 452 (474)
T ss_dssp STTCEEECCCTTSCHHHHHHHHHHHHHHHTS-----------CHHHHHTCCCSS--------------------------
T ss_pred cCCEEEEEeecCCCHHHHHHHHHHHHHHHHh-----------CchhhhcCCCCC--------------------------
Confidence 3689999999999999999999999887543 789999999999
Q ss_pred CcccCCCcccccccCCCccccccCc
Q 002263 909 AKFWPATGRVDNVYGDRNLICTLLP 933 (946)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (946)
||+||||+||||||+|+|..
T Consensus 453 -----~~~~~~~~~~~~~~~~~~~~ 472 (474)
T 1wyu_B 453 -----PVRRLDELRANKHPKLTYFD 472 (474)
T ss_dssp -----SSCSBCHHHHHHSCBCSSSC
T ss_pred -----CcCcccccccccCceeeecc
Confidence 99999999999999999964
No 3
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=100.00 E-value=6e-39 Score=373.18 Aligned_cols=406 Identities=20% Similarity=0.310 Sum_probs=311.2
Q ss_pred cCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCCccCCCCCHHHHHHHHHHHHcCccCcCCccc
Q 002263 401 ETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMI 480 (946)
Q Consensus 401 ~~~t~edid~ll~~l~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~ 480 (946)
..+|++|+++|++.++.+ |+|+|++ +||++++++ ++ .+| +++||.++++++..++++|.. +...
T Consensus 4 ~~~~~~~~~~ml~~~g~~-----~~~~~~~----~~p~~~~~~-~~-~lp---~~~~~~~~~~~~~~l~~~~~~--~~~~ 67 (438)
T 1wyu_A 4 TPHTEEEIREMLRRVGAA-----SLEDLFA----HLPKEILSP-PI-DLP---EPLPEWKVLEELRRLAAQNLP--AHKA 67 (438)
T ss_dssp CCCCHHHHHHHHHHHTCS-----STGGGGT----TSCGGGSSC-CC-CCC---CCCCHHHHHHHHHHHHHTSCC--CTTC
T ss_pred CCcCHHHHHHHHHHcCCC-----CHHHHHH----hCcHHHhcC-CC-CCC---CCCCHHHHHHHHHHHHhcCcC--cccc
Confidence 357899999999999987 8999984 599999988 64 666 689999999999999998754 1122
Q ss_pred cceeee--cCCCcccccccccCccc-cccCCCCcccccccHHHHHHHHHHHHHHhhCCCccc--ccCCchHHHHHHHHHH
Q 002263 481 PLGSCT--MKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS--LQPNAGAAGEYAGLMV 555 (946)
Q Consensus 481 ~lGs~~--~~~~~~~~~~~~~~~~f-~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~~~~~--l~~~sGa~ge~a~l~a 555 (946)
.+|.+. ...+..+... ..+++| ..|+||+| +.+||..+++.++++++++++|++..+ +.+++++ +.++++++
T Consensus 68 ~~~~g~~~~~~p~~v~~~-~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~ta-a~ea~~~a 144 (438)
T 1wyu_A 68 FLGGGVRSHHVPPVVQAL-AARGEFLTAYTPYQP-EVSQGVLQATFEYQTMIAELAGLEIANASMYDGATA-LAEGVLLA 144 (438)
T ss_dssp CCCSSCCCCCCCHHHHHH-HTSHHHHHCCSCCSG-GGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHH-HHHHHHHH
T ss_pred ccCCCccCCcCcHHHHHH-HhcchhhhcCCCCcc-hhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHH-HHHHHHHH
Confidence 344333 3344444332 344566 45899998 899999999999999999999998654 3333332 33466666
Q ss_pred HHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCccc
Q 002263 556 IRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHG 631 (946)
Q Consensus 556 ~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G 631 (946)
++. . ++++||++...|+++... ++..|++++.++. +++.+|+++ ++ ++|++|++++||++|
T Consensus 145 ~~~---~----~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~---~~t~~v~i~~pn~tG 209 (438)
T 1wyu_A 145 LRE---T----GRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG---EEVGAVVVQNPNFLG 209 (438)
T ss_dssp HHH---H----TCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC---TTEEEEEEESSCTTS
T ss_pred Hhc---C----CCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hC---CCeEEEEEECCCCCe
Confidence 542 2 468999999988777644 3568999999997 568888776 54 789999999999999
Q ss_pred ccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCc
Q 002263 632 VYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP 711 (946)
Q Consensus 632 ~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~ 711 (946)
.+. |+++|+++||++|+++++|.. ..+++.+..|+++|+|++++| +|.|++|+++||||+|++++++++.+++|++.
T Consensus 210 ~~~-~l~~i~~la~~~g~~vivd~d-~~a~g~~~~~~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~ 286 (438)
T 1wyu_A 210 ALE-DLGPFAEAAHGAGALFVAVAD-PLSLGVLKPPGAYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRL 286 (438)
T ss_dssp BCC-CHHHHHHHHHHTTCEEEEECC-TTGGGTBCCHHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCC
T ss_pred EEe-cHHHHHHHHHHcCCEEEEEec-hhhccCcCCCccCCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCce
Confidence 998 899999999999999998743 224555667788999999999 67799999999999999999999988888776
Q ss_pred cccCCCC-CC---------C----CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc
Q 002263 712 VVSTGGI-PA---------P----EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 712 v~~~~d~-~~---------~----~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~ 777 (946)
+|.+.++ +. + ++++++.++|++ +...+..+++|+..+|++|+++..++...+++++.++|++.
T Consensus 287 ~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~---~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 363 (438)
T 1wyu_A 287 VSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN---AQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEV 363 (438)
T ss_dssp EEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eccccccCCCcceeeeccccccccchhcccCCccch---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6543222 11 0 124567777763 34445556778999999999999999999999999999875
Q ss_pred --CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc--C-CCCCCCCCEEEEEcCCCCCHHHHHHHHHH
Q 002263 778 --YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG--P-TMSWPVPGTLMIEPTESESKEELDRYCDA 852 (946)
Q Consensus 778 --~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~--~-~~~~p~~~~lri~~t~~~t~~eid~~~~a 852 (946)
+++. ++ .++++.+.+... .+..++.++|.++||.+ + ...++ .+.+||++++.+|++|+|+++++
T Consensus 364 ~g~~~~--~~-~~~~~~~~~~~~-------~~~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~ 432 (438)
T 1wyu_A 364 PGVRPF--TP-KPFFNEFALALP-------KDPEAVRRALAERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREA 432 (438)
T ss_dssp TTCEEC--SC-SSBCSEEEEECS-------SCHHHHHHHHHHTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHH
T ss_pred CCeEEC--CC-CCeEEEEEEeCC-------CCHHHHHHHHHHCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHH
Confidence 4443 22 245666666542 46789999999999998 2 23344 68999999999999999999999
Q ss_pred HHHHH
Q 002263 853 LISIR 857 (946)
Q Consensus 853 L~~i~ 857 (946)
|++++
T Consensus 433 l~~~l 437 (438)
T 1wyu_A 433 LKEVL 437 (438)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98763
No 4
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=100.00 E-value=3.6e-36 Score=353.27 Aligned_cols=374 Identities=18% Similarity=0.193 Sum_probs=294.9
Q ss_pred cCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHHhcCCc---ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhh
Q 002263 17 TVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAE 92 (946)
Q Consensus 17 ~ip~~~-~~~~~~lp~~~~~~se~e~~~~~~~l~~~n~~---~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e 92 (946)
.||+++ ++.+++|| ++||.|+++++++|+++|.. ...|+| |.+++..|.++. .+.++ ++.|+|||++
T Consensus 29 ~~p~~~~~~~~~~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~-~~~~~---~~~~~~~~~~ 99 (474)
T 1wyu_B 29 LIPKEHLREVPPRLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHE-EAARL---FADLHPYQDP 99 (474)
T ss_dssp HSCGGGBCSSCCCCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHH-HHHHT---TSSCCTTSCG
T ss_pred cCCHHHhccCCCCCC----CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHH-HHHHH---HHhcCCCCch
Confidence 499999 88889997 79999999999999999975 235788 888888898875 66654 7889999998
Q ss_pred -hhhhHHHHHHHHHHHHHHHhCCCCcceEEc-ccHHHHHHHHHHHhcc-ccCCCC-----EEEEcCCCCHHHHHHHHHhh
Q 002263 93 -IAQGRLESLLNFQTMIADLTGLPMSNASLL-DEGTAAAEAMAMCNNI-QKGKKK-----TFIIASNCHPQTIDICITRA 164 (946)
Q Consensus 93 -~sqg~l~~l~e~q~~la~L~g~~~~~~sl~-~~~Ta~~ea~~la~~~-~~~~gd-----~vvv~~~~Hps~~~~~~~~a 164 (946)
.+||.++.+.++++++++++|++. .+++ .+||.+..+++++.+. ..++|| +||+++..|+++...++
T Consensus 100 ~~~~g~~~l~~~l~~~la~~~g~~~--~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~--- 174 (474)
T 1wyu_B 100 RTAQGALRLMWELGEYLKALTGMDA--ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATAS--- 174 (474)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHH---
T ss_pred hhChHHHHHHHHHHHHHHHHHCCCc--eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHH---
Confidence 899999999999999999999986 3444 6777666654444321 001444 99999999999998764
Q ss_pred cCCCeEEEEecc--------ccccc-cCCCEeEEEEEcCCCceee-cchHHHHHHHHhCCcEEEEEecCccccC--CCCC
Q 002263 165 DGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVMATDLLALTI--LKPP 232 (946)
Q Consensus 165 ~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~pn~~G~i-~di~~i~~~a~~~gal~~v~a~~~al~~--l~~~ 232 (946)
..|++++.++. ++|++ ++++|++|++++||++|.+ .|+++|+++||++|+++++|. ..+.+. ..++
T Consensus 175 -~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~De-a~~~~~~g~~~~ 252 (474)
T 1wyu_B 175 -MAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDG-ANLNAIMGWARP 252 (474)
T ss_dssp -HTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEG-GGGGGTTTTCCH
T ss_pred -HCCCEEEEecCCCCCCcCHHHHHHhhCCCceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeC-chhhhhccCCCc
Confidence 35888888765 34556 7889999999999999999 699999999999999999943 222222 2356
Q ss_pred CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccch
Q 002263 233 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 311 (946)
Q Consensus 233 ~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~ 311 (946)
+++|+|++++|+ |+|++|+|+|||++|+++++++++++++++++|. + | ..|.+++ +++++++|.+.+. .
T Consensus 253 ~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~--~--g-~~~~~~~-~~~~~~~~~~~~~---~- 322 (474)
T 1wyu_B 253 GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVER--G--E-EGFYLDF-DRPKSIGRVRSFY---G- 322 (474)
T ss_dssp HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEE--C--S-SCEEEEC-CCTTCCCCSSSTT---S-
T ss_pred ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeec--c--C-CeeEecc-cCcccCcccccCc---C-
Confidence 778999999998 8899999999999999999999999998888763 1 3 3477776 5889988876432 1
Q ss_pred HHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CCCCcCeEEEecC--C-HHHHHHHHHHcCCee
Q 002263 312 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA--D-AHAIASAAYKIEMNL 387 (946)
Q Consensus 312 ~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~~~~~i~~~--~-~~~v~~~L~~~GI~~ 387 (946)
+.+....+..++..+|.++++++.++..++++++++.|+++| +++. +...++.+.+.++ . ..++.++|.++||.+
T Consensus 323 ~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~ 401 (474)
T 1wyu_B 323 NFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEFVAQPPEGFRALDLAKGLLELGFHP 401 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHHTTCCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cEecCCCCcceEEEEEcCCCCCHHHHHHHHHHCCccc
Confidence 223233333456778889999999999999999999999986 8874 3334555566552 2 789999999999986
Q ss_pred eee-----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 388 RVV-----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 388 ~~~-----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
... ..+.+|+|++.++|++|+++++++|+.
T Consensus 402 ~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~ 436 (474)
T 1wyu_B 402 PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA 436 (474)
T ss_dssp CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred cccccccccCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 432 257899999999999999999999963
No 5
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-30 Score=304.43 Aligned_cols=382 Identities=16% Similarity=0.170 Sum_probs=273.3
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcC--ccCcCCcccccee-eecCCCcccccccccCccccccCCCCcccccccHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSK--ELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 524 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~--~~~~~~~~~~lGs-~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~e 524 (946)
.+| ..++++.+++++++++... +..+.++.+ +|. +... +...+.+...+..|...+++++ +.++|..++..+
T Consensus 37 ~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 111 (497)
T 3mc6_A 37 QLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKV-SGAVYHGG-DDLIHLQTIAYEKYCVANQLHP-DVFPAVRKMESE 111 (497)
T ss_dssp SCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCB-SSSCSCCC-HHHHHHHHHHHHHTSSCBTTCT-TTCHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHhhhcCCCCCCCCCE-eeecCCCc-hHHHHHHHHHHHHHhhcCCCCc-ccChHHHHHHHH
Confidence 566 5789999999999999874 554443333 332 2211 1222222222334555667777 778999999999
Q ss_pred HHHHHHHhhCCC--c-ccccCCchHHHHHHHHHHHHHHHHh-cCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-
Q 002263 525 LGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKA-RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 599 (946)
Q Consensus 525 l~~~la~l~G~~--~-~~l~~~sGa~ge~a~l~a~r~y~~~-~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~- 599 (946)
+++++++++|++ . ..+.+++|++++..++++++.+... +|. .+++|+++...|+++..++...|++++.||+++
T Consensus 112 ~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~-~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~ 190 (497)
T 3mc6_A 112 VVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGI-TEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT 190 (497)
T ss_dssp HHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCC-SSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred HHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCC-CCceEEEeCCccHHHHHHHHHcCCeEEEEecCcc
Confidence 999999999998 3 3466777887777676666654322 343 457899999999999999999999999999987
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccc---------c--cCC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---------L--TSP 667 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g---------l--~~p 667 (946)
++.+|+++|+++++ +++++|++++|+ .+|.++ |+++|+++||++|+++|+|+|+...... + ...
T Consensus 191 ~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~-~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~ 266 (497)
T 3mc6_A 191 TYQVDLGKVKKFIN---KNTVLLVGSAPNFPHGIAD-DIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF 266 (497)
T ss_dssp TCSBCTTTTGGGCC---SSEEEEEEETTCTTTCCCC-SCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST
T ss_pred cCcCCHHHHHHHHh---hCCEEEEEECCCCCCCcCC-CHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccc
Confidence 78999999999996 789999999996 699998 7999999999999999999987421111 1 112
Q ss_pred CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHH
Q 002263 668 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 668 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
...|+|++++++||++ +||+++|+++++++......... . ..+ .+......++.++. ....+++.|+.
T Consensus 267 ~~~g~d~~~~s~~K~l-----~~~~~~g~~~~~~~~~~~~~~~~-~--~~~--~~~~~~~~~~~g~~--~~~~~~a~~aa 334 (497)
T 3mc6_A 267 RVPGVTSISCDTHKYG-----FAPKGSSVIMYRNSDLRMHQYYV-N--PAW--TGGLYGSPTLAGSR--PGAIVVGCWAT 334 (497)
T ss_dssp TSTTCCEEEEETTTTT-----CCCSSCEEEECSSHHHHTTTSCC-B--TTC--TTSCBCCSSSCSSC--BHHHHHHHHHH
T ss_pred cCCCCcEEEECchhhc-----CCCCCceeEEecCHHHHhhhhcc-c--ccc--cCCCcCCcCcccCC--cchhHHHHHHH
Confidence 3468999999999987 35678899999875433221110 0 011 00011112222221 23345567889
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 826 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~-~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~ 826 (946)
+..++.+|+++..++...++++++++|++ +..+...++ +....+.++.. +.+..++.++|.++||.++...
T Consensus 335 l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~--~~~~~v~~~~~------~~~~~~l~~~L~~~Gi~v~~~~ 406 (497)
T 3mc6_A 335 MVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN--PRYSVISFSSK------TLNIHELSDRLSKKGWHFNALQ 406 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC--CCSSEEEEECT------TTTHHHHHHHHHTTTCBCEECC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--CCeeEEEEeCC------CCCHHHHHHHHHhCCEEEecCC
Confidence 99999999999999999999999999988 322221121 22333555543 4678999999999999876544
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 WPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 ~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+| ..+|++++ ..|++++|+++++|+++++++.+
T Consensus 407 ~~--~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 407 KP--VALHMAFT-RLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp SS--CCEEEECC-TTTTCTHHHHHHHHHHHHHHHTC
T ss_pred CC--CeEEEEEe-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 43 57899999 67899999999999999887764
No 6
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=7.2e-27 Score=272.47 Aligned_cols=383 Identities=11% Similarity=0.017 Sum_probs=258.9
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCc-CCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSL-CHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 526 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~-~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~ 526 (946)
.+| .++.+++++++++.++...+... .....+++ +...+...+... +.++-+++++ +.+++..+++.+++
T Consensus 17 ~lp--~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~--~~~~~~v~e~~~----~a~~~~~~~~-~~~~~~~~l~~~~~ 87 (452)
T 2dgk_A 17 RFP--LHEMRDDVAFQIINDELYLDGNARQNLATFCQ--TWDDENVHKLMD----LSINKNWIDK-EEYPQSAAIDLRCV 87 (452)
T ss_dssp SCC--CSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC--CCCCHHHHHHHH----HTTTCBTTCT-TTCHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHhcCCCCCccCCCCeeC--CCchHHHHHHHH----HHhccCCCCh-hhChhHHHHHHHHH
Confidence 445 47899999999999998655331 11112223 111111222221 1112123444 55678899999999
Q ss_pred HHHHHhhCCCcc------cccCCchHHHHHHHHHHHHHHHH----hcCCC-CCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 527 EWLCTITGFDSF------SLQPNAGAAGEYAGLMVIRAYHK----ARGDH-HRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 527 ~~la~l~G~~~~------~l~~~sGa~ge~a~l~a~r~y~~----~~G~~-~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
+++++++|++.. .+.+++|++++..++++++.... .+|.. .+++||+++ .|.++..++.+.|++++.|
T Consensus 88 ~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v 166 (452)
T 2dgk_A 88 NMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREI 166 (452)
T ss_dssp HHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEE
Confidence 999999999853 35566777666555555543111 13421 246899999 9988888899999999999
Q ss_pred cCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc------CCEEEEecccccccccc-cC
Q 002263 596 GTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGL-TS 666 (946)
Q Consensus 596 ~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~------g~ll~vD~a~~~a~~gl-~~ 666 (946)
|+++ ++.+|+++|+++|+ ++|++|++++|+ .+|.++ |+++|+++||++ |+++|||+|+......+ ..
T Consensus 167 ~~~~~~~~~d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~-~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 242 (452)
T 2dgk_A 167 PMRPGQLFMDPKRMIEACD---ENTIGVVPTFGVTYTGNYE-FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP 242 (452)
T ss_dssp CCBTTBCSCCHHHHHHHCC---TTEEEEECBBSCTTTCBBC-CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT
T ss_pred ecCCCCCeECHHHHHHHHh---hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCc
Confidence 9987 69999999999997 789999999995 699998 899999999996 99999999864321111 11
Q ss_pred C-----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc-cC-CCC---CCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 667 P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA-PFL---PSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 667 p-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~-~~l---p~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
+ ...++|++++++||++ ++|+++|++++++. +. +.+ +....+ ......+..+.
T Consensus 243 ~~~~~~~~~~~d~~~~~~hK~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~r-- 305 (452)
T 2dgk_A 243 DIVWDFRLPRVKSISASGHKFG-----LAPLGCGWVIWRDEEALPQELVFNVDYLGG----------QIGTFAINFSR-- 305 (452)
T ss_dssp TCCCSTTSTTEEEEEEETTTTT-----CCCSSCEEEEESSGGGSCGGGCEEECCTTC----------CEEECCSCCSC--
T ss_pred cchhhcCCCCCcEEEECccccc-----CCCCCeEEEEEcCHHHHHHHhccCccccCC----------CCCCcccCCCC--
Confidence 1 1238999999999976 45678999999753 33 332 111100 00000111111
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
....++..|+.+..+|.+|+++..++...+++++.++|++. +++..++...+..+.++|.++... ..+.+..++.++
T Consensus 306 ~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~~~l~~~ 384 (452)
T 2dgk_A 306 PAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE-DPGYTLYDLSER 384 (452)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC-CCSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcc-cccCCHHHHHHH
Confidence 11134456788888999999999999999999999999885 444433210124455667654210 012456899999
Q ss_pred HHHCCcccCCCCCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 815 LMDYGFHGPTMSWP----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 815 L~~~Gi~~~~~~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
|.++||.++....| ..+.+||+++..+|++|+|+|+++|+++++++++
T Consensus 385 L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 385 LRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp HHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999976532222 1348999999999999999999999999988776
No 7
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.95 E-value=1.7e-26 Score=273.91 Aligned_cols=383 Identities=16% Similarity=0.167 Sum_probs=263.8
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCc-cCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKE-LSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 526 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~-~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~ 526 (946)
.+| .++.++.++++.++++...+ ..+. +..++|+.....+.....+...+..+.+.+++++ ..+++..++..+++
T Consensus 70 ~lp--~~g~~~~~i~~~l~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~le~~l~ 145 (514)
T 3mad_A 70 RLP--RAGLPRAEILAEIAAMGAAESPAWR-DGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHP-DLWPSTAKFEAEVV 145 (514)
T ss_dssp SCC--SSCCCHHHHHHHHHHHHHHHHHHHH-TTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCT-TTCHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHhccCCCCC-CCceEEEecCCCCCHHHHHHHHHHHHhhcCCccc-ccChHHHHHHHHHH
Confidence 455 67899999999999986544 2222 2233453221111111111111122334445554 55678888888999
Q ss_pred HHHHHhhCCCc---cc--ccCCchHHHHHHHHHHHHHHHH-hcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 527 EWLCTITGFDS---FS--LQPNAGAAGEYAGLMVIRAYHK-ARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 527 ~~la~l~G~~~---~~--l~~~sGa~ge~a~l~a~r~y~~-~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
+++++++|++. .. +.+++|++++..++++++.+.. .+| .++++|+++...|.++..++...|++++.+|++++
T Consensus 146 ~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g-~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~ 224 (514)
T 3mad_A 146 AMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKG-ITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDAD 224 (514)
T ss_dssp HHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHC-CSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCTT
T ss_pred HHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcC-CCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCCC
Confidence 99999999983 33 6777888888777776665432 234 24589999999999988889999999999999999
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccc------ccc----cCCCc
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ------VGL----TSPGY 669 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~------~gl----~~pg~ 669 (946)
+.+|+++|+++++ +++++|++++|+ .+|.++ ++++|+++|+++|+++|+|+++.... .|. .....
T Consensus 225 ~~~d~~~Le~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~ 300 (514)
T 3mad_A 225 YRADVAAMREAIT---PNTVVVAGSAPGYPHGVVD-PIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRL 300 (514)
T ss_dssp SCBCHHHHHHHCC---TTEEEEEEETTCTTTCCCC-CHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTS
T ss_pred CCCCHHHHHHHhc---cCCEEEEEeCCCCCCcccc-CHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccC
Confidence 9999999999996 789999999996 589998 79999999999999999999864211 011 11134
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
.|+|++++++||++ +||+++|+++++++......... ..+|. +.......+.++. ....++.+|+.+.
T Consensus 301 ~g~d~~~~s~~K~l-----~~~~~~g~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~gs~--~~~~~~a~~aal~ 368 (514)
T 3mad_A 301 EGVTSVSADTHKYG-----YGAKGTSVILYRRPDLLHYQYFI---AADWP--GGLYFSPTFAGSR--PGALSATAWAAML 368 (514)
T ss_dssp TTCCEEEECTTTTT-----CCCSSCEEEEESSHHHHTTTCEE---ESSCT--TCSEEESSSCSSC--CHHHHHHHHHHHH
T ss_pred CCCcEEEECchhcc-----CCCCCeEEEEEeCHHHhcccccc---ccccC--CCcccCCccCCCC--chHHHHHHHHHHH
Confidence 58999999999997 35668899998875433221100 01110 0000001111111 1233456788889
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 829 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~ 829 (946)
.++.+|+.+..++...+++++.++|++...+...++... .+.+... +.+..++.++|.++||.++...+
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~---~~~~~~~------~~~~~~l~~~L~~~Gi~v~g~~~-- 437 (514)
T 3mad_A 369 SLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW---VIAVASD------ELNIYQVMEEMAGRGWRLNGLHR-- 437 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS---EEEEECS------SSCHHHHHHHHHTTTCBCEEETT--
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE---EEEEeCC------CCCHHHHHHHHHhcCCEeccCCC--
Confidence 999999999999999999999999988522222121111 2334332 46789999999999998854444
Q ss_pred CCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 002263 830 PGTLMIEPTES-ESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 830 ~~~lri~~t~~-~t~~eid~~~~aL~~i~~e~~~ 862 (946)
++.+|++++.. ++++++|+++++|+++++++++
T Consensus 438 ~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 438 PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 47899999854 4569999999999999988776
No 8
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=3.4e-26 Score=270.60 Aligned_cols=389 Identities=14% Similarity=0.100 Sum_probs=254.9
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCc--cc-ccccccCccccccCCCCcccccccHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNA--TT-EMMPVTWPSFANIHPFAPADQAQGYQEMFNN 524 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~--~~-~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~e 524 (946)
.+| ..+.++++++++++++...+..+ .+..++|......+. .. ++... ..+-+.+.. +.+++..++..+
T Consensus 68 ~~p--~~~~~~~~~~~~~~~~~~~~~~~-~~p~f~~~~~~~~~~~~~~~e~l~~----~~~~~~~~~-~~~p~~~~le~~ 139 (511)
T 3vp6_A 68 ELS--DHPESLEQILVDCRDTLKYGVRT-GHPRFFNQLSTGLDIIGLAGEWLTS----TANTNMFTY-EIAPVFVLMEQI 139 (511)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHTSCCT-TSTTEESSSSCCCCHHHHHHHHHHH----HHCCCSSCT-TTCHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHhhccCCC-CCCCceEeecCCCcHHHHHHHHHHH----HhccCCCCc-ccCchHHHHHHH
Confidence 556 46889999999999988877665 344456642111111 11 11110 111111111 346778888889
Q ss_pred HHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHH----HhcCC--CCCCEEEEcCCCCCCCHHHHHHcCC---EE
Q 002263 525 LGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYH----KARGD--HHRNVCIIPVSAHGTNPATAAMCGM---KI 592 (946)
Q Consensus 525 l~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~----~~~G~--~~~~~Ili~~saHg~~~~~a~~~G~---~v 592 (946)
+.+|+++++|++. ..+++++|++++..++++++... ..+|. .++++|+++..+|.++..++.+.|+ ++
T Consensus 140 ~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~ 219 (511)
T 3vp6_A 140 TLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNV 219 (511)
T ss_dssp HHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred HHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcE
Confidence 9999999999983 34566778877776666665421 12332 1356889999999999999999998 99
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCC-
Q 002263 593 VSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 667 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p- 667 (946)
+.++++++|.+|+++|+++|++. +..+++|++++|+ .+|.++ |+++|+++|++||+|+|||+|+..+. +..|
T Consensus 220 ~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd-~l~~I~~ia~~~~~~lhvD~a~~~~~--~~~~~ 296 (511)
T 3vp6_A 220 ILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD-PIQEIADICEKYNLWLHVDAAWGGGL--LMSRK 296 (511)
T ss_dssp EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBC-CHHHHHHHHHHHTCEEEEEETTGGGG--GGCTT
T ss_pred EEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccc-cHHHHHHHHHHcCCEEEEEccchhhH--hhChh
Confidence 99999989999999999999742 1228899999996 689998 89999999999999999999875322 2122
Q ss_pred ------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc-cCCC----CCCCccccCCCC-CCCCCCCCCCCcccCcc
Q 002263 668 ------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPF----LPSHPVVSTGGI-PAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 668 ------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~----lp~~~v~~~~d~-~~~~~~~~~~~i~~~~~ 735 (946)
|..++|++++++||||+.|. +.|++++++. +.+. .+..+.....++ +.+. .....+. .
T Consensus 297 ~~~~~~g~~~aDsv~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~--~~~~~~~---~ 366 (511)
T 3vp6_A 297 HRHKLNGIERANSVTWNPHKMMGVLL-----QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYD--TGDKAIQ---C 366 (511)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGC--CGGGSSC---S
T ss_pred hhhhccCCccCCEEEECcccccCCCc-----CeEEEEEeCHHHHHHHhccCCccccCcccccccccC--ccCCCCC---C
Confidence 34578999999999997664 4567888753 2221 122221111000 0000 0000111 1
Q ss_pred chhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEeccccccc-CCC------
Q 002263 736 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-AGI------ 806 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~-~g~------ 806 (946)
+....+...|+++..+|.+|+.++.++...+++|+++.|++. +++..+ +.+....++|.+.+.... .+.
T Consensus 367 ~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~--~~p~~~~v~f~~~p~~~~~~~~~~~~~~ 444 (511)
T 3vp6_A 367 GRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFN--GEPEHTNVCFWYIPQSLRGVPDSPQRRE 444 (511)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSS--SCCSSSCEEEEECCGGGSSCCCCHHHHH
T ss_pred CCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEec--CCCCeEEEEEEEeCccccccccchhHHH
Confidence 112234567999999999999999999999999999999875 444321 012333455654321100 000
Q ss_pred ----CHHHHHHHHHHCCcccCCCCCCC---CCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHH
Q 002263 807 ----EPEDVAKRLMDYGFHGPTMSWPV---PGTLMIEP-TESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 807 ----~~~~i~~~L~~~Gi~~~~~~~p~---~~~lri~~-t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
...++.++|.++|+.+.... |. .+.+|+++ +..++.+|||+++++|+++.+.+
T Consensus 445 ~l~~~~~~l~~~L~~~G~~~~~~~-~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 445 KLHKVAPKIKALMMESGTTMVGYQ-PQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEE-EETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEE-EeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 13468999999997643211 11 13699999 68899999999999998875544
No 9
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.95 E-value=2.3e-26 Score=272.63 Aligned_cols=390 Identities=13% Similarity=0.083 Sum_probs=250.1
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 527 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~ 527 (946)
.+| .++.++++++++++++...+.... +..++++......+..-... ....+.+-+.++. +.+++..+++.++++
T Consensus 81 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~-~l~~~~n~~~~~~-~~s~~~~~le~~~~~ 155 (515)
T 2jis_A 81 ELR--SQGESQKQILERCRAVIRYSVKTG-HPRFFNQLFSGLDPHALAGR-IITESLNTSQYTY-EIAPVFVLMEEEVLR 155 (515)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHHSCCTT-STTEESSSCCCCCHHHHHHH-HHHHHHCCCTTCT-TTCHHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHhcCCCCCC-CCCeEEEeeCCCCHHHHHHH-HHHHHhccCCCch-hhchHHHHHHHHHHH
Confidence 556 478999999999999887765433 33455542221111110000 0001222222233 667888899999999
Q ss_pred HHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHH----HhcCCC--CCCEEEEcCCCCCCCHHHHHHcCC---EEEEEcC
Q 002263 528 WLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYH----KARGDH--HRNVCIIPVSAHGTNPATAAMCGM---KIVSVGT 597 (946)
Q Consensus 528 ~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~----~~~G~~--~~~~Ili~~saHg~~~~~a~~~G~---~vv~v~~ 597 (946)
|+++++|++.. .+..++|+++++.++.++|.+. ..+|.. ++.+|+++...|.++..++...|+ +++.+|+
T Consensus 156 ~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~ 235 (515)
T 2jis_A 156 KLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA 235 (515)
T ss_dssp HHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB
T ss_pred HHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEec
Confidence 99999999843 3455667766665666555432 123320 133789999999999999999888 9999999
Q ss_pred CCCCCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCC------
Q 002263 598 DAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP------ 667 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p------ 667 (946)
++++.+|+++|+++|++. +.++++|++++|+ .+|.++ |+++|+++|+++|+++|||+|+.... +..+
T Consensus 236 ~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~-~l~~I~~la~~~g~~l~vD~a~~~~~--~~~~~~~~~~ 312 (515)
T 2jis_A 236 DERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD-PLEAIADVCQRHGLWLHVDAAWGGSV--LLSQTHRHLL 312 (515)
T ss_dssp CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHHTCEEEEEETTGGGG--GGCTTTGGGG
T ss_pred CCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc-CHHHHHHHHHHcCCeEEEehhhhhHH--HhChhhHhhc
Confidence 889999999999999742 2268999999994 689998 79999999999999999999864222 2212
Q ss_pred -CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCC----CCCCccccCCCC-CCCCCCCCCCCcccCccchhh
Q 002263 668 -GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPF----LPSHPVVSTGGI-PAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 668 -g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~----lp~~~v~~~~d~-~~~~~~~~~~~i~~~~~g~~~ 739 (946)
+..++|++++++||+|+.| .|+|++++++. +.+. .+..+.+...+. +.. +..+..+.. +...
T Consensus 313 ~g~~~aD~v~~s~hK~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~--~~~~~~~~~---~rr~ 382 (515)
T 2jis_A 313 DGIQRADSVAWNPHKLLAAG-----LQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVAL--DTGDKVVQC---GRRV 382 (515)
T ss_dssp TTGGGCSEEEECTTSTTCCC-----SCCEEEEESCCSCHHHHHHCC---------CCSCGGG--CCGGGCSCS---SCCC
T ss_pred CCCccCCEEEECcccccCCC-----CCeeEEEEeChHHHHHHHhcCCchhccCCcccccccC--CCCCCCCCC---CCcc
Confidence 2248899999999998544 24789999866 5432 233222211100 000 011111111 1111
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEeccccccc---CCCC-------
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT---AGIE------- 807 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~---~g~~------- 807 (946)
.+...|+.++.+|.+|+++..++...+++++.++|++. +++. ++ +....++|...+-... ...+
T Consensus 383 ~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~--~~--~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~ 458 (515)
T 2jis_A 383 DCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELV--ME--PEFVNVCFWFVPPSLRGKQESPDYHERLSK 458 (515)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES--SC--CSSSEEEEEECCGGGTTCTTSTTHHHHHHT
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe--CC--CCeeEEEEEEeCccccccccchhHHHHHHH
Confidence 23456788889999999999999999999999999875 4433 21 2233455543210000 0011
Q ss_pred -HHHHHHHHHHCCcccCCC-CCC-CCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHH
Q 002263 808 -PEDVAKRLMDYGFHGPTM-SWP-VPGTLMIEP-TESESKEELDRYCDALISIREE 859 (946)
Q Consensus 808 -~~~i~~~L~~~Gi~~~~~-~~p-~~~~lri~~-t~~~t~~eid~~~~aL~~i~~e 859 (946)
...+.++|.+.|+..... .++ ..+.+|+++ +..+|++|||+++++|+++.++
T Consensus 459 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 459 VAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 123678888889754211 011 135899999 8999999999999999887643
No 10
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=263.74 Aligned_cols=389 Identities=14% Similarity=0.088 Sum_probs=253.4
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeee--cCCCcccccccccCccccccCCCCcccccccHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCT--MKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNL 525 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~--~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el 525 (946)
.+| ..+.+.+++++.+.++...+.....+..++|... ...+........ ...+-+.+.. +.+++..+++.++
T Consensus 50 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~n~~~~~~-~~~p~~~~lE~~v 123 (481)
T 4e1o_A 50 SAP--EDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLA---DAINCLGFTW-ASSPACTELEMNV 123 (481)
T ss_dssp SCC--SSCCCHHHHHHHHHHHTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHH---HHHCCCCSST-TTCHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCCHHHHHHHHHH---HHhCcccCCc-CCCcHHHHHHHHH
Confidence 456 5788999999999997665533223344455421 111111111110 0111111211 4467888999999
Q ss_pred HHHHHHhhCCCcc-----------cccCCchHHHHHHHHHHHHHHHHh----cC-------CCCCCEEEEcCCCCCCCHH
Q 002263 526 GEWLCTITGFDSF-----------SLQPNAGAAGEYAGLMVIRAYHKA----RG-------DHHRNVCIIPVSAHGTNPA 583 (946)
Q Consensus 526 ~~~la~l~G~~~~-----------~l~~~sGa~ge~a~l~a~r~y~~~----~G-------~~~~~~Ili~~saHg~~~~ 583 (946)
.+|+++++|++.. .+.+++|+++++.++++.|..... .| ..++.+|+++..+|.+..+
T Consensus 124 ~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 203 (481)
T 4e1o_A 124 MDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEK 203 (481)
T ss_dssp HHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHH
T ss_pred HHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHH
Confidence 9999999999853 256678888888777777654211 11 1145788999999999999
Q ss_pred HHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcC---CCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccc
Q 002263 584 TAAMCGMKIVSVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN 659 (946)
Q Consensus 584 ~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~---~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~ 659 (946)
++.+.|.+++.||+++++.+|+++|+++|++.. ..+.+|+++.++ .+|.++ |+++|+++|++||+++|||+|+..
T Consensus 204 ~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id-~l~~I~~la~~~~~~lhvDaA~g~ 282 (481)
T 4e1o_A 204 AGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFD-CLSELGPICAREGLWLHIDAAYAG 282 (481)
T ss_dssp HHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHHTCEEEEECTTGG
T ss_pred HHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcC-CHHHHHHHHHHcCCeEEeehhhHH
Confidence 999999999999999899999999999997421 127788888886 589998 799999999999999999998643
Q ss_pred ccccc--cCC---CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCCCC--ccccCCCCCCCCCCCCCCCc
Q 002263 660 AQVGL--TSP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSH--PVVSTGGIPAPEKSQPLGTI 730 (946)
Q Consensus 660 a~~gl--~~p---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp~~--~v~~~~d~~~~~~~~~~~~i 730 (946)
..... .+. +-..+|++++++||+|+.|++ .|++++++. +.+.+... .+.............. .+
T Consensus 283 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g-----~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~--~~ 355 (481)
T 4e1o_A 283 TAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD-----CTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHW--QI 355 (481)
T ss_dssp GGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS-----CEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGG--SS
T ss_pred HHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc-----eEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccc--cc
Confidence 21110 011 112359999999999987744 457777753 22222111 0000000000000000 01
Q ss_pred ccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCH
Q 002263 731 AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEP 808 (946)
Q Consensus 731 ~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~ 808 (946)
. .+....+...|+.+..+|.+|+.++.++..+++++++++|++. +++. .+ +..+.++|+++. .+...
T Consensus 356 ~---~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~--~~--~~~~~v~f~~~~----~~~~~ 424 (481)
T 4e1o_A 356 P---LSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIP--AK--RHLGLVVFRLKG----PNSLT 424 (481)
T ss_dssp S---SCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECC--SC--CCSSEEEEEESS----CHHHH
T ss_pred c---CCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cC--CceeEEEEEeCC----chHHH
Confidence 1 1111234567999999999999999999999999999999875 4443 11 233446676542 11235
Q ss_pred HHHHHHHHHCCcccCC-CCCCCCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHH
Q 002263 809 EDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTES-ESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 809 ~~i~~~L~~~Gi~~~~-~~~p~~~~lri~~t~~-~t~~eid~~~~aL~~i~~e~~ 861 (946)
.++.++|.++|+.... ..+.....+|++++.. +|++||++++++|+++.+++.
T Consensus 425 ~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 425 ENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp HHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 7899999998865321 1111135799998754 489999999999999887653
No 11
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.94 E-value=1.5e-25 Score=264.94 Aligned_cols=395 Identities=12% Similarity=0.067 Sum_probs=249.0
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 527 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~ 527 (946)
.+| .++.++++++++++++...+.... +..++++.+....+..-.. -....+.+.+.+.. +.+++..++..++.+
T Consensus 65 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~-~~l~~~~n~~~~~~-~~~~~~~~le~~~~~ 139 (504)
T 2okj_A 65 ELS--DHPESLEQILVDCRDTLKYGVRTG-HPRFFNQLSTGLDIIGLAG-EWLTSTANTNMFTY-EIAPVFVLMEQITLK 139 (504)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHTSCCTT-CTTEESSSSCCCCHHHHHH-HHHHHHHCCBSSCT-TTCHHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHhhccCCCC-CCCEEEEccCCCCHHHHHH-HHHHHhhccCCCch-hhChHHHHHHHHHHH
Confidence 455 478999999999999887665433 3344554322211111000 00001222222222 445666777888889
Q ss_pred HHHHhhCCC--cc-cccCCchHHHHHHHHHHHHHHH----HhcCCCC-CC-EEEEcCCCCCCCHHHHHHcCC---EEEEE
Q 002263 528 WLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYH----KARGDHH-RN-VCIIPVSAHGTNPATAAMCGM---KIVSV 595 (946)
Q Consensus 528 ~la~l~G~~--~~-~l~~~sGa~ge~a~l~a~r~y~----~~~G~~~-~~-~Ili~~saHg~~~~~a~~~G~---~vv~v 595 (946)
|+++++|++ .. .+..++|++++..++.++|.+. ..+|... ++ +|+++...|.++..++...|+ +++.+
T Consensus 140 ~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v 219 (504)
T 2okj_A 140 KMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI 219 (504)
T ss_dssp HHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE
T ss_pred HHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEE
Confidence 999999998 33 3555677766665555555321 1233110 13 788999999999999988887 89999
Q ss_pred cCCCCCCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccc-----ccC
Q 002263 596 GTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-----LTS 666 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g-----l~~ 666 (946)
|+++++.+|+++|+++|++. +.++++|++++|+ .+|.++ |+++|+++|+++|+++|||+|+...... ...
T Consensus 220 ~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~-~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~ 298 (504)
T 2okj_A 220 KCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD-PIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKL 298 (504)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC-CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGG
T ss_pred ecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC-CHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhc
Confidence 99888999999999999742 1268999999995 689998 7999999999999999999986432211 001
Q ss_pred CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecc-cCC----CCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 667 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAP----FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 667 pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~----~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
.+..++|++++++||+|+.|+ ++|+++++++ +.+ ..++.+.+...+.+.. .......+..+ ....+
T Consensus 299 ~g~~~~D~i~~~~hK~~~~p~-----~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~---rr~~~ 369 (504)
T 2okj_A 299 NGIERANSVTWNPHKMMGVLL-----QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVS-YDTGDKAIQCG---RHVDI 369 (504)
T ss_dssp TTGGGCSEEEECTTSTTCCCS-----CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGG-GCCGGGSSCSS---CBCCH
T ss_pred CCcccCCEEEECchhhcCCCc-----ceEEEEEECHHHHHHHhcCCCccccCCcccccCc-CCcccCCCCCC---CCccH
Confidence 233479999999999986553 4678999863 432 2333322211100000 00000001100 11113
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccc-c--C--------CCCH
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKN-T--A--------GIEP 808 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~-~--~--------g~~~ 808 (946)
...|+.++.+|.+|+.+..++...+++++.++|++. +++..++ .+....++|...+... . . ....
T Consensus 370 l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 447 (504)
T 2okj_A 370 FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG--EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVA 447 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS--CCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC--CCCeEEEEEEEeCccccccccchhhHHHHHHHH
Confidence 345777889999999999999999999999999875 4443211 1223335554321000 0 0 0014
Q ss_pred HHHHHHHHHCCcc-cCCCCCCC-CCEEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Q 002263 809 EDVAKRLMDYGFH-GPTMSWPV-PGTLMIEPT-ESESKEELDRYCDALISIREE 859 (946)
Q Consensus 809 ~~i~~~L~~~Gi~-~~~~~~p~-~~~lri~~t-~~~t~~eid~~~~aL~~i~~e 859 (946)
.++.++|.++|+. +....+.. .+.+|++++ ..+|++|||+++++|+++.++
T Consensus 448 ~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 448 PKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp HHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5788999999964 32111211 257999997 889999999999999887654
No 12
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.6e-25 Score=258.98 Aligned_cols=378 Identities=13% Similarity=0.173 Sum_probs=255.2
Q ss_pred CccccCCCCHHHHhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHHhc--CCcce--eecCCCCCCCCCcHHHHHHH
Q 002263 1 MSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASM--NKVYK--SFIGMGYYNTHVPPVILRNI 76 (946)
Q Consensus 1 ml~~~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~se~e~~~~~~~l~~~--n~~~~--~~~G~g~~~~~~p~~i~~~i 76 (946)
||++++.+..++|+.. +|... ....|| ++++++.+++++++++... +..+. +|.|.-+.+. +.+.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~-~~~~~--~~~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~ 84 (497)
T 3mc6_A 13 EVTKVKQSIEDELIRS-DSQLM--NFPQLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGG---DDLIHLQ 84 (497)
T ss_dssp -------------------CCC--CCSSCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCC---HHHHHHH
T ss_pred HHHHHHHHHHHhhcCC-ccccc--cccCCC--CCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCc---hHHHHHH
Confidence 6778888888888864 55433 234677 6899999999999999884 43332 3555433322 2222223
Q ss_pred HhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC--CcceEEcccHHHHHHHHHHHhccc----cC-CCCEEEEc
Q 002263 77 MENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ----KG-KKKTFIIA 149 (946)
Q Consensus 77 ~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~--~~~~sl~~~~Ta~~ea~~la~~~~----~~-~gd~vvv~ 149 (946)
.+.-..+..+++++++.++|..+...++++++++++|++ ..++.+++|||.++..++.+.+.. ++ ++++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~ 164 (497)
T 3mc6_A 85 TIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAP 164 (497)
T ss_dssp HHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEe
Confidence 222222444578888889999999999999999999998 668889999998888776655310 01 23899999
Q ss_pred CCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc-cCCCEeEEEEEcCC-CceeecchHHHHHHHHhCCcEEE
Q 002263 150 SNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVV 218 (946)
Q Consensus 150 ~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~-i~~~t~~v~v~~pn-~~G~i~di~~i~~~a~~~gal~~ 218 (946)
...|+++...++. .|++++.+++ ++|++ +++++++|++++|+ .+|.+.|+++|+++||++|++++
T Consensus 165 ~~~h~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~li 240 (497)
T 3mc6_A 165 VTAHAGFDKAAYY----FGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLH 240 (497)
T ss_dssp TTSCHHHHHHHHH----SCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEE
T ss_pred CCccHHHHHHHHH----cCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEE
Confidence 9999999888754 5888888764 34566 77889999999995 79999999999999999999999
Q ss_pred EEecCccc-----------cCC--CCCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCC
Q 002263 219 MATDLLAL-----------TIL--KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGK 285 (946)
Q Consensus 219 v~a~~~al-----------~~l--~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~ 285 (946)
|+. .++. +.+ ......|+|++++++++++ +||+++|+++++++..+.....+. .+..+.
T Consensus 241 vD~-a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l----~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~ 312 (497)
T 3mc6_A 241 VDS-CLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYG----FAPKGSSVIMYRNSDLRMHQYYVN---PAWTGG 312 (497)
T ss_dssp EET-TTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTT----CCCSSCEEEECSSHHHHTTTSCCB---TTCTTS
T ss_pred EEC-cchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhc----CCCCCceeEEecCHHHHhhhhccc---ccccCC
Confidence 953 2221 111 2235679999999995542 455678999998876655422110 000000
Q ss_pred cceEEecccccccccccccCCCccc-h--HHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCCC
Q 002263 286 PALRVAMQTREQHIRRDKATSNICT-A--QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLP 361 (946)
Q Consensus 286 ~~~~l~l~tre~~irre~aTsni~t-~--~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~~ 361 (946)
. .++.++++ . ....++.++ +..++.+|++++.+++.++++++++.|++ +.+++++..+
T Consensus 313 ~----------------~~~~~~~g~~~~~~~~a~~aa--l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~ 374 (497)
T 3mc6_A 313 L----------------YGSPTLAGSRPGAIVVGCWAT--MVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP 374 (497)
T ss_dssp C----------------BCCSSSCSSCBHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC
T ss_pred C----------------cCCcCcccCCcchhHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 0 01222211 1 122233333 36778899999999999999999999999 5339988666
Q ss_pred CcCeEEEecCC--HHHHHHHHHHcCCeeeeec-CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 362 FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 362 ~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~-~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
....+.+..++ +.++.++|.++||.++... +..+|++++ .+|++|+++++++|+.
T Consensus 375 ~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~i~~~~~~L~~ 432 (497)
T 3mc6_A 375 RYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHVVDEICDILRT 432 (497)
T ss_dssp CSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCTHHHHHHHHHH
T ss_pred CeeEEEEeCCCCCHHHHHHHHHhCCEEEecCCCCCeEEEEEe-CCCHHHHHHHHHHHHH
Confidence 66677777664 7899999999999887643 567999999 7899999999999974
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=5e-24 Score=242.29 Aligned_cols=369 Identities=17% Similarity=0.190 Sum_probs=251.2
Q ss_pred CCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHh
Q 002263 453 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTI 532 (946)
Q Consensus 453 ~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l 532 (946)
..+.++.+++++++++...+..+.. ...+|+.+...++.+..... ++.......+ ...++..+...+++++++++
T Consensus 7 ~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~a~~---~~~~~~~~~~-~~~~~~~~~~~~l~~~la~~ 81 (397)
T 3f9t_A 7 EKGVSEKEILEELKKYRSLDLKYED-GNIFGSMCSNVLPITRKIVD---IFLETNLGDP-GLFKGTKLLEEKAVALLGSL 81 (397)
T ss_dssp SSCCCHHHHHHHHHHHHTTSCCGGG-TCBCSCSCCCCCTHHHHHHH---HHTTCCTTSG-GGBHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhccCCCCCC-CCeEEEecCCCcHHHHHHHH---HHHhhcCCCc-ccChhHHHHHHHHHHHHHHH
Confidence 4678999999999999887766542 33567655544443332211 1111111112 22346778888999999999
Q ss_pred hCCCccc-ccCCchHHHHHHHHHHHHHHHHh---c--CCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHH
Q 002263 533 TGFDSFS-LQPNAGAAGEYAGLMVIRAYHKA---R--GDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIE 606 (946)
Q Consensus 533 ~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~---~--G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e 606 (946)
+|.+... +.+++|+++...++.+++..... . +.+++++|+++...|+++...+...|++++.+|+++++.+|++
T Consensus 82 ~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 161 (397)
T 3f9t_A 82 LNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEK 161 (397)
T ss_dssp TTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHH
T ss_pred hCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHH
Confidence 9987643 56677877776666665542111 1 2235789999999999988889999999999999989999999
Q ss_pred HHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccC----------CCcc--CCC
Q 002263 607 ELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS----------PGYI--GAD 673 (946)
Q Consensus 607 ~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~----------pg~~--GaD 673 (946)
+|+++++++ ++++|++++|+ .+|.+. ++++|+++|++||+++++|+++.....++.. +..+ ++|
T Consensus 162 ~l~~~i~~~--~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 3f9t_A 162 FVKDAVEDY--DVDGIIGIAGTTELGTID-NIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVD 238 (397)
T ss_dssp HHHHHHHHS--CCCEEEEEBSCTTTCCBC-CHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCS
T ss_pred HHHHHHhhc--CCeEEEEECCCCCCCCCC-CHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCC
Confidence 999999831 78899999984 689998 7999999999999999999987422111111 2112 889
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecc-cCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
++++++||+++ +|.++|+++++++ +.+.+.... .+..... . ....++.. .......++.+..++
T Consensus 239 ~~~~s~~K~~~-----~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~-~--~~~~~~~~--~~~~~~~~a~~~~~~ 303 (397)
T 3f9t_A 239 SITIDPHKMGH-----CPIPSGGILFKDIGYKRYLDVDA-----PYLTETR-Q--ATILGTRV--GFGGACTYAVLRYLG 303 (397)
T ss_dssp EEECCTTTTTC-----CCSSCEEEEESSGGGGGGTCEEC-----TTSSSSE-E--CSSCSSCC--SHHHHHHHHHHHHHH
T ss_pred eEEEccccccC-----CCCCceEEEEeCHHHHHhhccCC-----ccccCCC-c--cccccccc--cchHHHHHHHHHHHh
Confidence 99999999874 3446778888654 433331100 0000000 0 00001111 112344566677778
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCC
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 831 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~ 831 (946)
.+++.+..++...+++++.+.|++. +.+..+ +..+.+.++.+ +..++.++|.++||.+..... ++
T Consensus 304 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~~~~~--~~ 369 (397)
T 3f9t_A 304 REGQRKIVNECMENTLYLYKKLKENNFKPVIE----PILNIVAIEDE--------DYKEVCKKLRDRGIYVSVCNC--VK 369 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC----CSSSEEEEECT--------THHHHHHHHHHTTCBCEECSS--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcC----CCccEEEEEeC--------CHHHHHHHHHhCCeEEeccCC--CC
Confidence 8888888888889999999999886 443322 12223455543 368899999999998754433 48
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.+||+++..+|++|+++++++|+++++
T Consensus 370 ~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 370 ALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 999999988999999999999988754
No 14
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.94 E-value=2.2e-25 Score=261.39 Aligned_cols=386 Identities=14% Similarity=0.090 Sum_probs=250.9
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCC--CcccccccccCccccccCCCCcccccccHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKL--NATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNL 525 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~--~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el 525 (946)
.+| .++.+.+++++.+.+....+.....+..++|...... +........ ...+-+.+.. +.+++..+++.++
T Consensus 45 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~---~~~n~~~~~~-~~~p~~~~lE~~v 118 (475)
T 3k40_A 45 AAP--EKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLS---GAIACIGFTW-IASPACTELEVVM 118 (475)
T ss_dssp SCC--SSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSSCCCCCHHHHHHHHHH---HHHCCCSSSC-CCCHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHhccCCCCCCcCceeeCCCCCcHHHHHHHHHH---HHhCccccCc-cCCcHHHHHHHHH
Confidence 567 5788999999999997655533223444566422111 111111100 0111111111 4467888899999
Q ss_pred HHHHHHhhCCCcc----------cccCCchHHHHHHHHHHHHHHHHh----cCC-------CCCCEEEEcCCCCCCCHHH
Q 002263 526 GEWLCTITGFDSF----------SLQPNAGAAGEYAGLMVIRAYHKA----RGD-------HHRNVCIIPVSAHGTNPAT 584 (946)
Q Consensus 526 ~~~la~l~G~~~~----------~l~~~sGa~ge~a~l~a~r~y~~~----~G~-------~~~~~Ili~~saHg~~~~~ 584 (946)
.+|+++++|++.. .+.+++|+++++.++++.|..... .|. .++++|+++..+|.+..++
T Consensus 119 ~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~ 198 (475)
T 3k40_A 119 MDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERA 198 (475)
T ss_dssp HHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHH
T ss_pred HHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHH
Confidence 9999999999842 356678888887777777654211 111 1246799999999999999
Q ss_pred HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccc
Q 002263 585 AAMCGMKIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNA 660 (946)
Q Consensus 585 a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a 660 (946)
+.+.|++++.||++++| +|+++|+++|++. +..+.+|+++.++ .+|.++ |+++|+++|++||+++|||+|+...
T Consensus 199 ~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~-~l~~I~~la~~~~~~lhvD~A~~~~ 276 (475)
T 3k40_A 199 GLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFD-YLDECGPVGNKHNLWIHVDAAYAGS 276 (475)
T ss_dssp HHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred HHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcC-CHHHHHHHHHHhCCeEEEeHHhHHH
Confidence 99999999999999899 9999999999742 1227788888886 589998 8999999999999999999987432
Q ss_pred cccccCC-------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc-cC-CCCCCC--ccccCCCCCCCCCCCCCCC
Q 002263 661 QVGLTSP-------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA-PFLPSH--PVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 661 ~~gl~~p-------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~-~~lp~~--~v~~~~d~~~~~~~~~~~~ 729 (946)
. +..+ +-.++|++++++||+|+.|+ |+|++++++. +. +.+... .+.......... .....
T Consensus 277 ~--~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~-----g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~--~~~~~ 347 (475)
T 3k40_A 277 A--FICPEYRHLMKGIESADSFNFNPHKWMLVNF-----DCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPD--YRHWQ 347 (475)
T ss_dssp G--GGSGGGGGGGTTGGGCSEEEECHHHHSSCCS-----SCEEEEESSGGGC----------------------------
T ss_pred H--HhCHhhHHHhcCcccCCEEEECchhccCCCC-----ceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCC--ccccc
Confidence 1 1111 11246999999999997664 4557777753 32 222110 000000000000 00001
Q ss_pred cccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCC
Q 002263 730 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIE 807 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~ 807 (946)
+. .+....++..|+.+..+|.+|+.++.++..+++++++++|++. +++.. + +..+.++|+++. .+..
T Consensus 348 ~~---~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~--~--~~~~iv~f~~~~----~~~~ 416 (475)
T 3k40_A 348 IP---LGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAA--E--INMGLVCFRLKG----SNER 416 (475)
T ss_dssp -C---CCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESS--C--CBTTEEEEEESS----CHHH
T ss_pred cc---CCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec--C--CceEEEEEEeCC----chHH
Confidence 11 1112234567999999999999999999999999999999875 44432 1 223345666542 1123
Q ss_pred HHHHHHHHHHCCcccCC-CCCCCCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHH
Q 002263 808 PEDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTES-ESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 808 ~~~i~~~L~~~Gi~~~~-~~~p~~~~lri~~t~~-~t~~eid~~~~aL~~i~~e~~ 861 (946)
..++.++|.++|+.... ..+.....+|++++.. +|++|||+++++|+++.+++.
T Consensus 417 ~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 417 NEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp HHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 57899999998875321 1111135799998754 589999999999999987764
No 15
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.94 E-value=3.1e-25 Score=261.11 Aligned_cols=386 Identities=14% Similarity=0.122 Sum_probs=248.5
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccccCccccc--cCCCCc-ccccccHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN--IHPFAP-ADQAQGYQEMFNN 524 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~~~~~f~~--~~p~~p-~e~~qG~~~~~~e 524 (946)
.+| .++.+++++++++.++...+.....+..++|+....... +....++.. +++.+. .+.+++..++..+
T Consensus 45 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~ 117 (486)
T 1js3_A 45 TAP--QEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTASSY-----PAMLADMLCGAIGCIGFSWAASPACTELETV 117 (486)
T ss_dssp SCC--SSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCCCCCH-----HHHHHHHHHHHHCCCCSSGGGCHHHHHHHHH
T ss_pred cCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeCCCCCCH-----HHHHHHHHHHHhCcCccccccChhHHHHHHH
Confidence 456 578999999999999776664433344566642211110 000112211 223221 1345567778888
Q ss_pred HHHHHHHhhCCCcc----------cccCCchHHHHHHHHHHHHHHHHh----c-CCC------CCCEEEEcCCCCCCCHH
Q 002263 525 LGEWLCTITGFDSF----------SLQPNAGAAGEYAGLMVIRAYHKA----R-GDH------HRNVCIIPVSAHGTNPA 583 (946)
Q Consensus 525 l~~~la~l~G~~~~----------~l~~~sGa~ge~a~l~a~r~y~~~----~-G~~------~~~~Ili~~saHg~~~~ 583 (946)
+.+|+++++|++.. .+.+++|++++..+++++|..... . |+- ++..|+++...|.+...
T Consensus 118 ~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~ 197 (486)
T 1js3_A 118 MMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER 197 (486)
T ss_dssp HHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH
T ss_pred HHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHH
Confidence 99999999999852 355667777776666655532111 1 210 11237789999999888
Q ss_pred HHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcC---CCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccc
Q 002263 584 TAAMCGMKIVSVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN 659 (946)
Q Consensus 584 ~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~---~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~ 659 (946)
++.+.|++++.||+++++.+|+++|+++|++.. ....+|++++|+ .+|.++ |+++|+++||++|+++|||+|+..
T Consensus 198 ~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~-~l~~I~~la~~~~~~lhvD~a~g~ 276 (486)
T 1js3_A 198 AGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFD-NLLEVGPICHEEDIWLHVDAAYAG 276 (486)
T ss_dssp HHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHTTCEEEEECTTGG
T ss_pred HHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCC-CHHHHHHHHHHcCCEEEEehhhHH
Confidence 999999999999998889999999999997311 112588999995 699998 899999999999999999998642
Q ss_pred ccccccCC-------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCC---CCCccccCCCC-CCCC-CCC
Q 002263 660 AQVGLTSP-------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL---PSHPVVSTGGI-PAPE-KSQ 725 (946)
Q Consensus 660 a~~gl~~p-------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~l---p~~~v~~~~d~-~~~~-~~~ 725 (946)
.. +..| +..++|++++++||+++.|+ ++|++++++. +.+.+ +..+.+...+. ...+ +..
T Consensus 277 ~~--~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~-----~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 349 (486)
T 1js3_A 277 SA--FICPEFRHLLNGVEFADSFNFNPHKWLLVNF-----DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHW 349 (486)
T ss_dssp GG--GGSTTTGGGGTTGGGCSEEEECHHHHSSCCS-----SCEEEEESCHHHHHGGGC------------CCSCCCGGGS
T ss_pred HH--HHCHHHHHHhcCccccCeeEEchhhhcCCCc-----ceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCcccc
Confidence 21 1111 22478999999999997653 5678998754 23333 22211110000 0000 000
Q ss_pred CCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEeccccccc
Q 002263 726 PLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT 803 (946)
Q Consensus 726 ~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~ 803 (946)
.. . .+ ....++..|+.+..+|.+|+++..++...+++++.++|++. +++..+ +..+.++|.+...
T Consensus 350 ~~-~-~~----rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~--- 416 (486)
T 1js3_A 350 QL-P-LG----RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE----VTLGLVCFRLKGS--- 416 (486)
T ss_dssp SS-C-SC----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC----CCSSEEEEEESSC---
T ss_pred CC-C-CC----CchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC----CceeEEEEEecCh---
Confidence 00 0 11 11124567888999999999999999999999999999875 343221 2334466665310
Q ss_pred CCCCHHHHHHHHHHCCcccC-CCCCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 804 AGIEPEDVAKRLMDYGFHGP-TMSWPVPGTLMIEPT-ESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 804 ~g~~~~~i~~~L~~~Gi~~~-~~~~p~~~~lri~~t-~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.....++.++|.++|+... ...+...+.+|++++ ..+|++||+++++.|+++.+++.+
T Consensus 417 -~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 417 -DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLA 476 (486)
T ss_dssp -HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0014789999998887532 111222468999975 457899999999999999887654
No 16
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.94 E-value=8.5e-24 Score=249.60 Aligned_cols=381 Identities=13% Similarity=0.094 Sum_probs=256.9
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCcccccee-eecCCCcccccccccCccccccCCCCcccccccHHHHHHHHH
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 526 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs-~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~ 526 (946)
.+| ..+.+..++++.+++....+- +..+++.+ ++...++....... +..+-+...+ +.+++..++..+++
T Consensus 31 ~~p--~~~~~~~~~~~~~~~~i~l~g---np~~~l~s~~t~~~~~~v~~~l~---~~~~~~~~~~-~~~p~~~~le~~~~ 101 (502)
T 3hbx_A 31 KMP--ENSIPKEAAYQIINDELMLDG---NPRLNLASFVTTWMEPECDKLIM---SSINKNYVDM-DEYPVTTELQNRCV 101 (502)
T ss_dssp SCC--SSCCCHHHHHHHHHHHGGGSC---CGGGBTTCCSCCCCCHHHHHHHH---HTTTCBTTCT-TTCHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHhccCC---CCCceeccccCCCCCHHHHHHHH---HHhccCCCCh-hcChhHHHHHHHHH
Confidence 455 467899999999987654432 12233433 44444443332211 1111111112 33456788888999
Q ss_pred HHHHHhhCCC--cc----cccCCchHHHHHHHHHHHHH-HHHh---cCCC-CCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 527 EWLCTITGFD--SF----SLQPNAGAAGEYAGLMVIRA-YHKA---RGDH-HRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 527 ~~la~l~G~~--~~----~l~~~sGa~ge~a~l~a~r~-y~~~---~G~~-~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
+++++++|++ .. .+.+++|++++..++++++. +... .|.. .+++|+++...|.+....+.+.|++++.+
T Consensus 102 ~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v 181 (502)
T 3hbx_A 102 NMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEV 181 (502)
T ss_dssp HHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEE
Confidence 9999999998 21 23356777776555555432 2111 2431 23489999999998888999999999999
Q ss_pred cCCCC-CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc------CCEEEEecccccccccc-cC
Q 002263 596 GTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGL-TS 666 (946)
Q Consensus 596 ~~~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~------g~ll~vD~a~~~a~~gl-~~ 666 (946)
|++++ +.+|+++|+++++ ++|++|++++|+ .+|.++ |+++|+++|+++ |+++|||+|+......+ ..
T Consensus 182 ~~~~~~~~~d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~-~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~ 257 (502)
T 3hbx_A 182 KLSEGYYVMDPQQAVDMVD---ENTICVAAILGSTLNGEFE-DVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYP 257 (502)
T ss_dssp CCBTTBCSCCHHHHHHHCC---TTEEEEEEEBSCTTTCCBC-CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT
T ss_pred ecCCCcCcCCHHHHHHHHh---hCCEEEEEecCCCCCCccc-CHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCc
Confidence 99876 8999999999997 789999999995 589998 899999999999 99999999875221111 11
Q ss_pred C-----CccCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccC-CCCCCCccccCCCC-CCCCCCCCCCCcccCccchh
Q 002263 667 P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLA-PFLPSHPVVSTGGI-PAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 667 p-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~-~~lp~~~v~~~~d~-~~~~~~~~~~~i~~~~~g~~ 738 (946)
. ...++|++.+++||++. +++|+|++++++ .+. ..+... ..| +.. .....+..+. .+
T Consensus 258 ~~~~~~~~~~~D~v~~s~hK~l~-----~p~g~G~~~~~~~~~l~~~~~~~-----~~yl~~~---~~~~~~~~sr--~~ 322 (502)
T 3hbx_A 258 ELEWDFRLPLVKSINVSGHKYGL-----VYAGIGWVIWRNKEDLPEELIFH-----INYLGAD---QPTFTLNFSK--GS 322 (502)
T ss_dssp TCCCSTTSTTEEEEEEETTTTTC-----CCSSCEEEEESSGGGSCGGGCEE-----ECSSSSC---EEECCSCCSC--BS
T ss_pred ccccccCCCCceEEEECcccccC-----CCCCeEEEEEeCHHHhhHHhccC-----cccccCC---CCCccccCCc--hH
Confidence 1 12489999999999874 446778888874 332 211100 011 000 0000111111 12
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
..++..|+.+..+|.+|+.+..++...++++|+++|++. +++..+ ++..+.+.|+++. ..+.+..++.++|.
T Consensus 323 ~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---~~~~~~v~f~~~~---~~~~~~~~l~~~L~ 396 (502)
T 3hbx_A 323 SQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK---DEGVPLVAFSLKD---SSCHTEFEISDMLR 396 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC---SSSSSEEEEEESS---CSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC---CCCceEEEEEecC---CCcCCHHHHHHHHH
Confidence 234567888999999999999999999999999999885 444321 1233446666542 11357789999999
Q ss_pred HCCcccCCCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 817 ~~Gi~~~~~~~p~----~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
++||.++....|. ...+||+++..+|++|+|+|+++|+++++++++
T Consensus 397 ~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 397 RYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999976544341 257999999999999999999999999998876
No 17
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.93 E-value=3.2e-23 Score=241.62 Aligned_cols=352 Identities=11% Similarity=0.068 Sum_probs=241.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCc-ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQ 105 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~~-~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q 105 (946)
++|| ++++++.++++++.++..++.. ..+ ...+.+++.++.+.+.+.+. +.. ++++++.+++..+...+++
T Consensus 16 ~~lp--~~g~~~~~v~~~~~~~~~~~~~~~~~--~~~f~~~~~~~~v~e~~~~a---~~~-~~~~~~~~~~~~~l~~~~~ 87 (452)
T 2dgk_A 16 KRFP--LHEMRDDVAFQIINDELYLDGNARQN--LATFCQTWDDENVHKLMDLS---INK-NWIDKEEYPQSAAIDLRCV 87 (452)
T ss_dssp CSCC--CSCCCHHHHHHHHHHHGGGSCCCTTB--CSCCSCCCCCHHHHHHHHHT---TTC-BTTCTTTCHHHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHhcCCCCCccC--CCCeeCCCchHHHHHHHHHH---hcc-CCCChhhChhHHHHHHHHH
Confidence 4566 5899999999999999865543 111 11122234445555555432 111 3455566789999999999
Q ss_pred HHHHHHhCCCCcc-----eEEcccHHHHHHHHHHHhccc-------cC---CCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 002263 106 TMIADLTGLPMSN-----ASLLDEGTAAAEAMAMCNNIQ-------KG---KKKTFIIASNCHPQTIDICITRADGFDIK 170 (946)
Q Consensus 106 ~~la~L~g~~~~~-----~sl~~~~Ta~~ea~~la~~~~-------~~---~gd~vvv~~~~Hps~~~~~~~~a~~~gi~ 170 (946)
+++++++|++..+ +.+++|||.++..++++++.. .+ .+++||+++ .|+++...++ ..|++
T Consensus 88 ~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~----~~G~~ 162 (452)
T 2dgk_A 88 NMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFAR----YWDVE 162 (452)
T ss_dssp HHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHH----HTTCE
T ss_pred HHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHH----HcCce
Confidence 9999999998775 889999997766655554310 11 136999999 9999988764 35889
Q ss_pred EEEeccc---------cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhC------CcEEEEEecCccccC---CC
Q 002263 171 VVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMATDLLALTI---LK 230 (946)
Q Consensus 171 v~~~~~~---------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~------gal~~v~a~~~al~~---l~ 230 (946)
++.++.+ +|++ ++++|++|++++| |.+|.+.|+++|+++||++ |++++|++ ..+.+. +.
T Consensus 163 v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~-a~~~~~~~~~~ 241 (452)
T 2dgk_A 163 LREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDA-ASGGFLAPFVA 241 (452)
T ss_dssp EEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEEC-TTGGGTHHHHC
T ss_pred EEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEc-ccHHHHHHhhC
Confidence 9988763 3455 7889999999998 6799999999999999995 99999954 222211 11
Q ss_pred CC-----CCccceEEEeccccccccCCCCCCceEEEEEchh-hh-hcCCCceEeEeecCCCCcce-EEeccccccccccc
Q 002263 231 PP-----GELGADIVVGSAQRFGVPMGYGGPHAAFLATSQE-YK-RMMPGRIVGVSIDSSGKPAL-RVAMQTREQHIRRD 302 (946)
Q Consensus 231 ~~-----~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~-~~-~~lp~~~~G~s~d~~g~~~~-~l~l~tre~~irre 302 (946)
++ ...|+|++++++++|+ ++|+++|+++++++ ++ +.+.. . ....+.. + ...+
T Consensus 242 ~~~~~~~~~~~~d~~~~~~hK~~----~~~~~~G~~~~~~~~~~~~~~~~--~---~~~~~~~-~~~~~~---------- 301 (452)
T 2dgk_A 242 PDIVWDFRLPRVKSISASGHKFG----LAPLGCGWVIWRDEEALPQELVF--N---VDYLGGQ-IGTFAI---------- 301 (452)
T ss_dssp TTCCCSTTSTTEEEEEEETTTTT----CCCSSCEEEEESSGGGSCGGGCE--E---ECCTTCC-EEECCS----------
T ss_pred ccchhhcCCCCCcEEEECccccc----CCCCCeEEEEEcCHHHHHHHhcc--C---ccccCCC-CCCccc----------
Confidence 11 2348999999996664 45678999999764 33 43310 0 0000000 0 0000
Q ss_pred ccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC----CCcCeEEEecCC------
Q 002263 303 KATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD------ 372 (946)
Q Consensus 303 ~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~----~~~~~~~i~~~~------ 372 (946)
.+|.+. ...+++.+++ ..+|.+|++++.++..++++++.+.|+++++++++.+ +.++.+.|..++
T Consensus 302 ~~~r~~---~~~~~~~aal--~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~ 376 (452)
T 2dgk_A 302 NFSRPA---GQVIAQYYEF--LRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGY 376 (452)
T ss_dssp CCSCBC---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSC
T ss_pred CCCChh---HHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccC
Confidence 111111 1223333443 5668899999999999999999999999955988742 456677776543
Q ss_pred -HHHHHHHHHHcCCeeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 373 -AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 -~~~v~~~L~~~GI~~~~~~-------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..++.++|.++||.++... .+.+|+|++..+|++|+++++++|+.
T Consensus 377 ~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~ 429 (452)
T 2dgk_A 377 TLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKA 429 (452)
T ss_dssp CHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 3789999999999765321 24799999999999999999999974
No 18
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.92 E-value=2.4e-23 Score=246.78 Aligned_cols=358 Identities=14% Similarity=0.069 Sum_probs=241.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCc--ceeecCCCCCCCCCcHHHHHHHHhCCcccccc-CCC--hhhhhhhHHHH
Q 002263 26 SMKFSKFDEGLTESQMIEHMQKLASMNKV--YKSFIGMGYYNTHVPPVILRNIMENPAWYTQY-TPY--QAEIAQGRLES 100 (946)
Q Consensus 26 ~~~lp~~~~~~se~e~~~~~~~l~~~n~~--~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~-~py--q~e~sqg~l~~ 100 (946)
++++| ++++++.+++++++++...+.. ...|++..+.+ ..|..+.. +|++++ +|+ +.+.+++..+.
T Consensus 79 ~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~------~~l~~~~n~~~~~~~~s~~~~~l 149 (515)
T 2jis_A 79 DLELR--SQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSG-LDPHALAG------RIITESLNTSQYTYEIAPVFVLM 149 (515)
T ss_dssp CCCCC--SSCCCHHHHHHHHHHHHHHSCCTTSTTEESSSCCC-CCHHHHHH------HHHHHHHCCCTTCTTTCHHHHHH
T ss_pred ccCCC--CCCCCHHHHHHHHHHHhcCCCCCCCCCeEEEeeCC-CCHHHHHH------HHHHHHhccCCCchhhchHHHHH
Confidence 45677 5899999999999998887743 22466544432 34554432 334433 343 56788999999
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc-----cCCCC------EEEEcCCCCHHHHHHHHHhhcCCCe
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-----KGKKK------TFIIASNCHPQTIDICITRADGFDI 169 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~-----~~~gd------~vvv~~~~Hps~~~~~~~~a~~~gi 169 (946)
..++++++++++|++..++.+++|||.++..++.+.+.. +.+|+ +|+++...|+++.+.++.+ +.|.
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~--g~g~ 227 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFL--GLGT 227 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT--TSCG
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHc--CCCC
Confidence 999999999999999888999999997766555544210 11343 8999999999999988654 2343
Q ss_pred -EEEEecc--------ccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCC
Q 002263 170 -KVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP 232 (946)
Q Consensus 170 -~v~~~~~--------~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~ 232 (946)
+++.++. ++|++ +++ ++++|++++| |.+|.+.|+++|+++||++|++++|++ .++.+.+..+
T Consensus 228 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~-a~~~~~~~~~ 306 (515)
T 2jis_A 228 DSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDA-AWGGSVLLSQ 306 (515)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEE-TTGGGGGGCT
T ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEeh-hhhhHHHhCh
Confidence 6777765 34554 533 4899999998 679999999999999999999999954 2333333222
Q ss_pred ------CC-ccceEEEecc-ccccccCCCCCCceEEEEEchh--hhhc----CCCceEeEeecCCCCc-ceEEecccccc
Q 002263 233 ------GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRM----MPGRIVGVSIDSSGKP-ALRVAMQTREQ 297 (946)
Q Consensus 233 ------~~-~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~--~~~~----lp~~~~G~s~d~~g~~-~~~l~l~tre~ 297 (946)
.. .++|++++++ |+|++|. ++|+++++++ ++++ .++.+.|...+..+.. ...+. -+
T Consensus 307 ~~~~~~~g~~~aD~v~~s~hK~l~~p~-----g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~----~~ 377 (515)
T 2jis_A 307 THRHLLDGIQRADSVAWNPHKLLAAGL-----QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKV----VQ 377 (515)
T ss_dssp TTGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGC----SC
T ss_pred hhHhhcCCCccCCEEEECcccccCCCC-----CeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCC----CC
Confidence 22 3899999999 6665443 3789999977 6554 4666655322110000 00011 13
Q ss_pred cccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEec-C-----
Q 002263 298 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-A----- 371 (946)
Q Consensus 298 ~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~-~----- 371 (946)
..||.. +..+++. +..+|.+|++++.+++.++++++.+.|+++.+++++.++.+..|+|.. +
T Consensus 378 ~~rr~~-------al~~~~~-----l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~ 445 (515)
T 2jis_A 378 CGRRVD-------CLKLWLM-----WKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRG 445 (515)
T ss_dssp SSCCCC-------HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTT
T ss_pred CCCccc-------HHHHHHH-----HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccc
Confidence 444432 1223322 255678999999999999999999999998339998766566677743 1
Q ss_pred -----C-H-------HHHHHHHHHcCCee-ee--ec--CCeEEEEe-ccCCCHHHHHHHHHHHh
Q 002263 372 -----D-A-------HAIASAAYKIEMNL-RV--VD--SNTVTASF-DETTTLEDVDKLFIVFA 416 (946)
Q Consensus 372 -----~-~-------~~v~~~L~~~GI~~-~~--~~--~~~lris~-~~~~t~edid~ll~~l~ 416 (946)
. . ..+.++|.+.|+.+ .. .. .+.+|+++ ++++|++|+++++++|.
T Consensus 446 ~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~ 509 (515)
T 2jis_A 446 KQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELE 509 (515)
T ss_dssp CTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1 1 13677888889754 32 12 25799999 89999999999999986
No 19
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.91 E-value=9.2e-23 Score=240.70 Aligned_cols=383 Identities=15% Similarity=0.149 Sum_probs=243.5
Q ss_pred CCCCCHHHHHHHHHHHHcCccCcCCccccceeee-cCCCccc-ccccccCccccccCCCCcccccccHHHHHHHHHHHHH
Q 002263 453 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCT-MKLNATT-EMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLC 530 (946)
Q Consensus 453 ~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~-~~~~~~~-~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la 530 (946)
.++.+.+++++.+.+..-.+.....+..+|++.. ...++.+ ...... ..+.+.+.. +.+++..++..++.+|++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~---~~n~~~~~~-~~~~~~~~le~~~~~~la 150 (497)
T 2qma_A 75 NKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIA---ALNQSMDSW-DQASSATYVEQKVVNWLC 150 (497)
T ss_dssp SCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHH---HHCCCTTCG-GGCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHH---hhcccccch-hhChHHHHHHHHHHHHHH
Confidence 4567889999999875544433233455666421 1222211 111100 111111111 345567778888899999
Q ss_pred HhhCCCc--ccccCCchHHHHHHHHHHHHHHHH---------hcCCCC--CC-EEEEcCCCCCCCHHHHHHcCC---EEE
Q 002263 531 TITGFDS--FSLQPNAGAAGEYAGLMVIRAYHK---------ARGDHH--RN-VCIIPVSAHGTNPATAAMCGM---KIV 593 (946)
Q Consensus 531 ~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~---------~~G~~~--~~-~Ili~~saHg~~~~~a~~~G~---~vv 593 (946)
+++|++. ..+.+++|++++..++.++|.+.. .+|... ++ +|+++...|.++..++.+.|. +++
T Consensus 151 ~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~ 230 (497)
T 2qma_A 151 DKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVM 230 (497)
T ss_dssp HHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEE
T ss_pred HHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEE
Confidence 9999963 346667788888777777665322 133221 34 789999999999999988877 899
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcC---CCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc-C--
Q 002263 594 SVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S-- 666 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~---~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~-- 666 (946)
.+|+++++.+|+++|+++|++.. .++.+|+++.|+ .+|.++ |+++|+++|+++|+++|||+|+........ +
T Consensus 231 ~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~-~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~ 309 (497)
T 2qma_A 231 TVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAID-DLDFIADMAVKHDMWMHVDGAYGGALILSSHKSR 309 (497)
T ss_dssp EECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGG
T ss_pred EEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCC-CHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHh
Confidence 99999889999999999997421 125588888885 589998 799999999999999999998643221111 0
Q ss_pred -CCccCCCEEEeCCCcccccCCCCCCCcceeEEEeccc-CCCCCCCccccCCCCCCCCCCCCCCCcc--cCccchhhHHH
Q 002263 667 -PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTIA--AAPWGSALILP 742 (946)
Q Consensus 667 -pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~lp~~~v~~~~d~~~~~~~~~~~~i~--~~~~g~~~~~~ 742 (946)
.+-.++|++++++||+|+.| .++|+++++++. .+.+... ..+..... ....++. +...+....+.
T Consensus 310 ~~gi~~~D~i~~s~hK~l~~p-----~~~G~l~~~~~~~~~~~~~~-----~~yl~~~~-~~~~~~~~~~~~~~r~~~al 378 (497)
T 2qma_A 310 LKGVERAHSISVDFHKLFYQT-----ISCGALLVNDKSNFKFLLHH-----ADYLNREH-DELPNLVDKSIATTKRFDAL 378 (497)
T ss_dssp GTTGGGCSEEEEETTTTTCCC-----SSCEEEEESCGGGGGGGCC--------------------------CCSCCCTHH
T ss_pred hcCcccCCEEEEcchhccCCC-----cceEEEEEeCHHHHHHhcCC-----chhcCCcc-ccCCCccccCCCCCCchhHH
Confidence 11127899999999998654 356788887542 3222110 00000000 0000000 00000111234
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCC----HHHHHHHHH
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIE----PEDVAKRLM 816 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~----~~~i~~~L~ 816 (946)
..|+.+..+|.+|+.+..++...+++++.+.|++. +++.. . +..+.+.|++.+. +.. ..++.++|.
T Consensus 379 ~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~---~~~~~v~f~~~~~----~~~~~~l~~~l~~~l~ 450 (497)
T 2qma_A 379 KVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLA-E---PSLSTVLFRATHE----TADLDELNKALRLEAL 450 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECS-C---CSSSEEEEEECCS----SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEc-C---CCceEEEEEEcCC----ccCHHHHHHHHHHHHH
Confidence 56888899999999999999999999999999875 33321 1 1223355655421 112 246778888
Q ss_pred HCCcccCCCC-CCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPTMS-WPVPGTLMIEP-TESESKEELDRYCDALISIREE 859 (946)
Q Consensus 817 ~~Gi~~~~~~-~p~~~~lri~~-t~~~t~~eid~~~~aL~~i~~e 859 (946)
++|+.+.... +...+.+|+++ ...+|++|++++++.|+++.++
T Consensus 451 ~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 451 TRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 9998764211 11135799998 7889999999999999988765
No 20
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.91 E-value=7.3e-23 Score=233.67 Aligned_cols=375 Identities=12% Similarity=0.091 Sum_probs=235.9
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCC---------cccccee-eecCCCcccccccccCccccccCCCCccccccc
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCH---------SMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQG 517 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~---------~~~~lGs-~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG 517 (946)
.+| ++|+||.++...+.+++..|..... +.+ +|+ |++.+=...+-. ....+|...+|.. .-+++
T Consensus 22 ~~p--~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv-~~~~~~~r~~g~~hg~-~~~~d~l~~~~~~--~~~~~ 95 (450)
T 3bc8_A 22 KCP--EDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRV-ASALVARRHYRFIHGI-GRSGDISAVQPKA--AGSSL 95 (450)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCC-SCHHHHHHTTTCCSCB-CC-------CCSB--HHHHH
T ss_pred cCC--ccCCCHHHHHHHHHHHhhCCCCccccccccCcccceE-ecccccCCccceecch-hHHHHHHHhCccc--cCCcH
Confidence 456 6899999999999999999876553 222 333 433211111111 1112454444422 22344
Q ss_pred HHHHHHHHHHHHHHhhCCCcc--cccCCchHHHH-HHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGE-YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 594 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~--~l~~~sGa~ge-~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~ 594 (946)
..++..++..|+.+++|++.. .+.+++++.+. .+++.++|.. + .++++||+|+.+|.+..+++.++|++.+.
T Consensus 96 ~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~---~--~~~~~viv~r~aHkSv~kAl~l~Gl~p~~ 170 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHK---R--PKAKYIIWPRIDQKSCFKSMVTAGFEPVV 170 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHH---C--TTCCEEEEECCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchh---h--cCCCEEEEECCcHHHHHHHHHHcCCeeEE
Confidence 556777899999999999864 25555554333 3333344431 1 12478999999999999999999999988
Q ss_pred EcC---CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCccc--ccccCHHHHHHHHHHcCCEEEEecccccccccccC--C
Q 002263 595 VGT---DAKGNINIEELRKAAEANRDNLSTLMVTYPSTHG--VYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--P 667 (946)
Q Consensus 595 v~~---~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G--~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~--p 667 (946)
|+. ++.+.+|+++|+++|++++.+..++++++|+++| +++ ||++|+++||+||+|||||+|+..-+ .+.. |
T Consensus 171 v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~d-dl~~Ia~ia~~~gi~l~VD~A~G~~~-~~~~~l~ 248 (450)
T 3bc8_A 171 IENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPD-RLEELAVICANYDIPHVVNNAYGLQS-SKCMHLI 248 (450)
T ss_dssp ECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCC-CHHHHHHHHHHHTCCEEEECTTTTTC-HHHHHHH
T ss_pred EEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceec-CHHHHHHHHHHCCCeEEEECCCchhh-hhhHhHH
Confidence 865 4568999999999998765344566677788777 778 89999999999999999999864211 1211 1
Q ss_pred --C-cc-CCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHH
Q 002263 668 --G-YI-GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 668 --g-~~-GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
+ +. |+|+++.|.|||+..|+++ +++.+++ .+.+.+.. .+ . +.-++ +. .+
T Consensus 249 ~~a~~~~~AD~~v~S~HK~l~a~~~~-----~~l~~rd~~~~~~~~~-------~~-------~-g~~s~----Sp--sL 302 (450)
T 3bc8_A 249 QQGARVGRIDAFVQSLDKNFMVPVGG-----AIIAGFNEPFIQDISK-------MY-------P-GRASA----SP--SL 302 (450)
T ss_dssp HHHHHHSCCCEEEEEHHHHHSCCSSC-----EEEEESCHHHHHHHHH-------HS-------C-SCBCS----HH--HH
T ss_pred HHHhcccCCCEEEECCccCCCchhcc-----EEEEecCHHHHHHHHH-------Hh-------h-cCCcc----cH--HH
Confidence 1 22 7999999999999887654 3666653 22222100 00 0 00011 12 24
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
..|+.+..+|.+|+++..++.++++++++++|+++ +....-+... ......+.++.+......+..++.-.+...|
T Consensus 303 ~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~-~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g 381 (450)
T 3bc8_A 303 DVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPH-NPISLAMTLKTIDGHHDKAVTQLGSMLFTRQ 381 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTT-CSSEEEEECTTTSSSSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCcc-CCCcceeecccccccccCCCceeEEEecCCC
Confidence 57888888899999999999999999999999764 2321111100 0012334333221111234455555555555
Q ss_pred cccCCC---------------------CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTM---------------------SWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 820 i~~~~~---------------------~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+....+ .......+.+..+...+++|+++|+++|+++.++.++
T Consensus 382 ~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 382 VSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp CCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 321100 0011367788888889999999999999999877655
No 21
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.91 E-value=5.1e-23 Score=240.20 Aligned_cols=357 Identities=14% Similarity=0.095 Sum_probs=231.2
Q ss_pred CCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCcc-cccc----------c-ccCccccccCCCCcccccccHHH
Q 002263 453 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT-TEMM----------P-VTWPSFANIHPFAPADQAQGYQE 520 (946)
Q Consensus 453 ~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~-~~~~----------~-~~~~~f~~~~p~~p~e~~qG~~~ 520 (946)
.+++++.++.+.++++...+... ....++.+ ..+.. .+.+ + ....+|.+.+| .. ..+++..+
T Consensus 60 ~~g~~~~~i~~~~~~~~~~~~~~---yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 133 (456)
T 2z67_A 60 ENGIDDEKIKLFLKFLSMMDTDK---DPKSVRIG-EREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KA-SGASIMYA 133 (456)
T ss_dssp SSCCCHHHHHHHHHHHHTTBGGG---CTTCEECS-SCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TB-HHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccccc---cccccccc-cccccccccccCccccccCCCccHHHHHHhhCc-cc-ccCcHHHH
Confidence 36789999999988887654211 01112222 22221 1110 0 01112333333 11 23335677
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC--
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT-- 597 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~-- 597 (946)
++.++++++++++|++...+.+++|+ .++.+++++++.+ + ++++|+++...|.+....+...|++++.++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~---~---~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKK---Y---GSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHH---H---CCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHh---c---CCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence 88899999999999985333444454 4444444444432 1 2467888888999888888999999999987
Q ss_pred -CCCCCCCHHHHHHHH-Hhc-CCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCC--Ccc-
Q 002263 598 -DAKGNINIEELRKAA-EAN-RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYI- 670 (946)
Q Consensus 598 -~~~g~~D~e~L~~~i-~~~-~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p--g~~- 670 (946)
++++.+|+++|+++| +.. ..++.+|++++|| .+|.++ |+++|+++||++|+++|||+|+.....++.+. ..+
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~-~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~ 286 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSD-DIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFK 286 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCC-CHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHT
T ss_pred cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcC-CHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhC
Confidence 667899999999999 421 2478889899994 699998 89999999999999999998754221222111 112
Q ss_pred -CCCEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 671 -GADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 671 -GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
++|++++++||+++ |++|+|+++++ +++.+.+.....| ... +.. ++..|+.+
T Consensus 287 ~~~D~~~~s~hK~~~-----~p~g~G~l~~~~~~~~~~l~~~~~g---------------~~~----~~~--~~~~~aal 340 (456)
T 2z67_A 287 YRVDAVVSSSDKNLL-----TPIGGGLVYSTDAEFIKEISLSYPG---------------RAS----ATP--VVNTLVSL 340 (456)
T ss_dssp SCCSEEEEEHHHHHC-----CCSSCEEEEESCHHHHHHHHTTSCS---------------CBC----SHH--HHHHHHHH
T ss_pred CCCCEEEEcCCCCcC-----CCCCeEEEEEcCHHHHhhcCcCCCC---------------CCC----CCH--HHHHHHHH
Confidence 89999999999874 44578899995 4444433111100 000 011 34567778
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc-CC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG-PT 824 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~-~~ 824 (946)
..+|.+|+.+..++...+++++.++|++.. .+...++. +.+.+++.. .+. ..++.++|.++|+.. ..
T Consensus 341 ~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~----~~v~~~~~~----~~~-~~~l~~~L~~~gi~~~rv 411 (456)
T 2z67_A 341 LSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE----SPIASCISV----NSD-PVEIAAKLYNLRVTGPRG 411 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC----CSSEEEEEC----SSC-HHHHHHHHHHTTEESCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC----CeEEEEEec----ccH-HHHHHHHHHHcCCCcceE
Confidence 888999999999999999999999998752 22221221 223444410 011 578999999998631 11
Q ss_pred C---------CC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 825 M---------SW-P-VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 825 ~---------~~-p-~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
. .+ + ..+.+|++++..+|++|||+|+++|++++
T Consensus 412 ~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 412 IKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp ECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred EeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 1 11 1 14789999999999999999999998653
No 22
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=2.1e-21 Score=220.66 Aligned_cols=333 Identities=17% Similarity=0.160 Sum_probs=231.9
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEE
Q 002263 67 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 146 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~v 146 (946)
..|+.+.+.+.+...-...++|+.........+.+.++++.+++++|.++.++.+++|+|.++++++.++++. +||+|
T Consensus 27 ~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~--~gd~v 104 (390)
T 1elu_A 27 ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWH--QGDEI 104 (390)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCC--TTCEE
T ss_pred CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCC--CCCEE
Confidence 3555554454432111112244432222233456778999999999998888999999999888887776433 78999
Q ss_pred EEcCCCCHHHHHHHHHhhcCCCeEEEEeccc----------cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHH---
Q 002263 147 IIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAH--- 211 (946)
Q Consensus 147 vv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~----------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~--- 211 (946)
+++...|+++...+...++..|.+++.++.+ ++++ +++++++|++.+| |.+|.+.|+++|.++|+
T Consensus 105 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~ 184 (390)
T 1elu_A 105 LLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQ 184 (390)
T ss_dssp EEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCC
T ss_pred EEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhh
Confidence 9999999999887765555568888888763 3555 6778999999998 67999999999999999
Q ss_pred -hCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEe-e-cCCCCc
Q 002263 212 -ANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS-I-DSSGKP 286 (946)
Q Consensus 212 -~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s-~-d~~g~~ 286 (946)
++|+++++|. ..+++... +..++++|++++|. |++ +||+++|++++++++.+.+.....|+. . +..+..
T Consensus 185 ~~~~~~li~De-a~~~g~~~~~~~~~~~d~~~~s~~K~~-----~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 258 (390)
T 1elu_A 185 GNYPVRVLVDG-AQSAGSLPLDFSRLEVDYYAFTGHKWF-----AGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGE 258 (390)
T ss_dssp SSSCCEEEEEC-TTTBTTBCCCTTTSCCSEEEEESSSTT-----CCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSC
T ss_pred hhcCcEEEEEc-ccccCCcCCChhhcCCCEEEccccccc-----cCCCceEEEEECHHhHhhcCCccccCCcccccccCc
Confidence 9999999943 34444332 23467899999998 645 455678999999998888755443320 0 000111
Q ss_pred ceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC--CC
Q 002263 287 ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PF 362 (946)
Q Consensus 287 ~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~G-l~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~--~~ 362 (946)
.|.+ ++...+.+.+|.|. ....++.+++ .++..+| ++++.++..++++++.+.|+++ | ++++.+ ..
T Consensus 259 ~~~~----~~~~~~~~~~~~~~---~~~~a~~~al--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~ 328 (390)
T 1elu_A 259 PTGW----AEGGKRFEVATSAY---PQYAGLLAAL--QLHQRQGTAEERYQAICQRSEFLWRGLNQLPH-VHCLATSAPQ 328 (390)
T ss_dssp EEEE----CSGGGGGCCSCCCH---HHHHHHHHHH--HHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTT-EEESCSSCCS
T ss_pred cccc----ccchHhhCCCCCCH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCC-cEEecCcccc
Confidence 1221 11112334456554 2333343443 3443445 8899999999999999999998 6 988742 22
Q ss_pred cCeEEEecC-C--HHHHHHHHHHcCCeeeeec-CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 363 FDTVKVKCA-D--AHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 363 ~~~~~i~~~-~--~~~v~~~L~~~GI~~~~~~-~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...+.+.++ + ..++.++|.++||.++... ++.+|+|++..++++|+++++++|+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 329 AGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp SSEEEEEECSSSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred ccEEEEEcCCCCCHHHHHHHHHHCCEEEEecCCCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 334555553 2 7889999999999987653 57899999999999999999999974
No 23
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.90 E-value=2.6e-23 Score=243.23 Aligned_cols=304 Identities=11% Similarity=0.072 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE-----EEe-
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV-----VVS- 174 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v-----~~~- 174 (946)
..++++.+++++|+++.++.+++|+|.++..++.++.....++++||++...|+++..+++..++..|+++ ...
T Consensus 113 ~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~ 192 (465)
T 3e9k_A 113 DESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP 192 (465)
T ss_dssp THHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred HHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence 34567899999999988999999999888877766531112577899999999999988876666667663 232
Q ss_pred -------ccccccc-cC---CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEE
Q 002263 175 -------DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 241 (946)
Q Consensus 175 -------~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v 241 (946)
|++++++ ++ +++++|++++| |.+|.+.|+++|.++||++|++++++. .++.+... +..++|+|+++
T Consensus 193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~-a~~~g~~~~~~~~~~~D~~~ 271 (465)
T 3e9k_A 193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDL-AHAVGNVELYLHDWGVDFAC 271 (465)
T ss_dssp CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEEC-TTTTTTSCCCHHHHTCCEEE
T ss_pred CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEh-hhhcCCcCCchhhcCCCEEE
Confidence 3355666 64 68999999998 679999999999999999999999953 34555442 22468999999
Q ss_pred ecc-ccccccCCCCCCc-eEEEEEchhhhhcCCCceEeEeecCCCCcceEEe--cccccccccccccCCCccchHHHHHH
Q 002263 242 GSA-QRFGVPMGYGGPH-AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA--MQTREQHIRRDKATSNICTAQALLAN 317 (946)
Q Consensus 242 ~s~-k~lg~P~~~GGP~-~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~--l~tre~~irre~aTsni~t~~~l~a~ 317 (946)
+++ |.| .|||+ .|++++++++.+.+.+.+.||..... ...|.+. ++......|++.||+|+. .+.++
T Consensus 272 ~s~~K~l-----~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~gt~~~~---~~~a~ 342 (465)
T 3e9k_A 272 WCSYKYL-----NAGAGGIAGAFIHEKHAHTIKPALVGWFGHEL-STRFKMDNKLQLIPGVCGFRISNPPIL---LVCSL 342 (465)
T ss_dssp ECSSSTT-----CCCTTCCCEEEECGGGTTTSCCSSCCGGGBCH-HHHTTCCSCCCBCSSGGGGCCSCCCHH---HHHHH
T ss_pred ECccccc-----ccCCCceEEEEEcHHHHhhcCCcccCccCCCC-CcccccCCCcCcCCChHHhccCCccHH---HHHHH
Confidence 998 665 24554 68999999998888777766421100 0011111 111233445677898874 44455
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-----------CCCEEEcCCC----CcCeEEEecCC-HHHHHHHHH
Q 002263 318 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-----------LGTVEVQGLP----FFDTVKVKCAD-AHAIASAAY 381 (946)
Q Consensus 318 ~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-----------~g~~~~~~~~----~~~~~~i~~~~-~~~v~~~L~ 381 (946)
.+++ .++...|++++.++..++++++.+.|++ .| ++++.+. ....+.|.++. +.++.++|.
T Consensus 343 ~aal--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-~~~~~p~~~~~~g~~~~~~~~~~~~~l~~~L~ 419 (465)
T 3e9k_A 343 HASL--EIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPV-VNIITPSHVEERGCQLTITFSVPNKDVFQELE 419 (465)
T ss_dssp HHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------C-EEECSCSSGGGBCSCEEEEECCTTCCHHHHHH
T ss_pred HHHH--HHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCC-eEEeCCCCHhhcccEEEEEecCCHHHHHHHHH
Confidence 5555 4555568999999999999999999988 45 8887532 13345565544 678999999
Q ss_pred HcCCeeeeecCCeEEEEe-ccCCCHHHHHHHHHHHhC
Q 002263 382 KIEMNLRVVDSNTVTASF-DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 382 ~~GI~~~~~~~~~lris~-~~~~t~edid~ll~~l~~ 417 (946)
++||.++...++.+|+|+ +.++|++|+++++++|..
T Consensus 420 ~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~ 456 (465)
T 3e9k_A 420 KRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTS 456 (465)
T ss_dssp TTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHH
T ss_pred HCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHH
Confidence 999998765678999999 799999999999999963
No 24
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.90 E-value=2.9e-21 Score=220.55 Aligned_cols=360 Identities=16% Similarity=0.119 Sum_probs=239.3
Q ss_pred HHHHHHHHHHHHhc--CCcceeecCCCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhCC
Q 002263 38 ESQMIEHMQKLASM--NKVYKSFIGMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 114 (946)
Q Consensus 38 e~e~~~~~~~l~~~--n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~ 114 (946)
-.+++++|+.+... +.. .-|++.+..+ ..|+.+.+.+.+... +....+.+......+..+.+.++++.+++++|.
T Consensus 5 ~~~~r~~f~~~~~~~~g~~-~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~ 82 (406)
T 1kmj_A 5 VDKVRADFPVLSREVNGLP-LAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINA 82 (406)
T ss_dssp HHHHHHTCGGGGCEETTEE-CEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCcccccccCCCc-eEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCC
Confidence 34566666654320 111 2345555544 466666545442111 111111111112223456677899999999999
Q ss_pred -CCcceEEcccHHHHHHHHHHHhc---cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-
Q 002263 115 -PMSNASLLDEGTAAAEAMAMCNN---IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 181 (946)
Q Consensus 115 -~~~~~sl~~~~Ta~~ea~~la~~---~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~- 181 (946)
++.++.+++|+|.+++.++.+++ .. +||+|+++...|+++...+...++..|++++.++. +++++
T Consensus 83 ~~~~~v~~~~g~t~a~~~~~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~ 160 (406)
T 1kmj_A 83 RSAEELVFVRGTTEGINLVANSWGNSNVR--AGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTL 160 (406)
T ss_dssp SCGGGEEEESSHHHHHHHHHHHTHHHHCC--TTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHH
T ss_pred CCCCeEEEeCChhHHHHHHHHHhhhhcCC--CCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHH
Confidence 67789899999998888877663 33 78999999999999887766555556888888764 45555
Q ss_pred cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCce
Q 002263 182 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHA 258 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~ 258 (946)
+++++++|++++| |.+|.+.|+++|.++||++|+++++|. ..+.+... +..++|+|++++|. |.| |+||+
T Consensus 161 l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~-~~~~g~~~~~~~~~~~d~~~~s~~K~~------g~~G~ 233 (406)
T 1kmj_A 161 FDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDG-AQAVMHHPVDVQALDCDFYVFSGHKLY------GPTGI 233 (406)
T ss_dssp CCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEEC-TTTTTTSCCCHHHHTCSEEEEEGGGTT------SCTTC
T ss_pred hccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEc-hhhcCCCCCcccccCCCEEEEEchhcc------CCCCc
Confidence 7788999999987 789999999999999999999999943 34444332 22346899999998 654 33458
Q ss_pred EEEEEchhhhhcCCCceEeEe-ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHH
Q 002263 259 AFLATSQEYKRMMPGRIVGVS-IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 337 (946)
Q Consensus 259 g~l~~~~~~~~~lp~~~~G~s-~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~ 337 (946)
|++++++++.+.+.....|++ .+... ......+ ...+.+.+.+|+++. ...++.+++ .++...+++++.++
T Consensus 234 G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~---~~~a~~~al--~~~~~~~~~~~~~~ 305 (406)
T 1kmj_A 234 GILYVKEALLQEMPPWEGGGSMIATVS-LSEGTTW--TKAPWRFEAGTPNTG---GIIGLGAAL--EYVSALGLNNIAEY 305 (406)
T ss_dssp EEEEECHHHHHHCCCSSCSTTSEEEEE-TTTEEEE--CCTTGGGCCSSCCHH---HHHHHHHHH--HHHHHHCHHHHHHH
T ss_pred EEEEEeHHHHhhcCCcccCCCceeecc-ccccccc--CCCchhccCCCCCHH---HHHHHHHHH--HHHHHcCHHHHHHH
Confidence 999999998888754433311 00000 0000001 112233455666652 333333333 44444578899999
Q ss_pred HHHHHHHHHHHHhcC-CCEEEcCCC-CcCeEEEecCC--HHHHHHHHHHcCCeeeeec------------CCeEEEEecc
Q 002263 338 VHGLAGTFALGLKKL-GTVEVQGLP-FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDE 401 (946)
Q Consensus 338 ~~~~a~~l~~~L~~~-g~~~~~~~~-~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~------------~~~lris~~~ 401 (946)
..++++++.+.|+++ | +++..+. ....+.+.+++ ..++.+.|.++||.++.-. ++.+|++++.
T Consensus 306 ~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~ 384 (406)
T 1kmj_A 306 EQNLMHYALSQLESVPD-LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAM 384 (406)
T ss_dssp HHHHHHHHHHHHTTSTT-EEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCT
T ss_pred HHHHHHHHHHHHhcCCC-eEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeec
Confidence 999999999999998 6 8887531 23345555554 7789999999999876421 4789999999
Q ss_pred CCCHHHHHHHHHHHhC
Q 002263 402 TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 402 ~~t~edid~ll~~l~~ 417 (946)
++|++|+++++++|..
T Consensus 385 ~~t~~~i~~~~~~l~~ 400 (406)
T 1kmj_A 385 YNTHEEVDRLVTGLQR 400 (406)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 9999999999999863
No 25
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=6.2e-21 Score=216.73 Aligned_cols=345 Identities=14% Similarity=0.143 Sum_probs=242.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCcce--eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHH
Q 002263 29 FSKFDEGLTESQMIEHMQKLASMNKVYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQT 106 (946)
Q Consensus 29 lp~~~~~~se~e~~~~~~~l~~~n~~~~--~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~ 106 (946)
|| ..++++.++++++.++...+..+. .|+|.+..+ .++.+.+.+.+. +..+ ...+...++..+...++++
T Consensus 5 lp--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~a~~~~---~~~~-~~~~~~~~~~~~~~~~l~~ 76 (397)
T 3f9t_A 5 MQ--EKGVSEKEILEELKKYRSLDLKYEDGNIFGSMCSN--VLPITRKIVDIF---LETN-LGDPGLFKGTKLLEEKAVA 76 (397)
T ss_dssp CC--SSCCCHHHHHHHHHHHHTTSCCGGGTCBCSCSCCC--CCTHHHHHHHHH---TTCC-TTSGGGBHHHHHHHHHHHH
T ss_pred CC--CCCCCHHHHHHHHHHhhccCCCCCCCCeEEEecCC--CcHHHHHHHHHH---Hhhc-CCCcccChhHHHHHHHHHH
Confidence 55 568999999999999987666554 688887543 334444455431 1111 1111223467788889999
Q ss_pred HHHHHhCCCCcceEEcccHHHHHHHHHHHhccc----------cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 107 MIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ----------KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 107 ~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~----------~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
.+++++|.+.+++.+++|||.+++.++.++... .++||+|+++...|+++...++. .|++++.++.
T Consensus 77 ~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~g~~~~~v~~ 152 (397)
T 3f9t_A 77 LLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREM----MDLEYIYAPI 152 (397)
T ss_dssp HHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHH----HTCEEEEECB
T ss_pred HHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHH----cCceeEEEee
Confidence 999999999988899999998888776655321 12489999999999998888754 3888888765
Q ss_pred c--------cccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC---C---------CCC
Q 002263 177 K--------DIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---K---------PPG 233 (946)
Q Consensus 177 ~--------~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l---~---------~~~ 233 (946)
+ +|++ +++ ++++|++.+| |.+|.+.|+++|.++|+++|+++++|. ..+.+.+ . .+-
T Consensus 153 ~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De-a~~~~~~~~~~~~~~~~~~~~~~ 231 (397)
T 3f9t_A 153 KEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDA-AFGGLVIPFLDDKYKKKGVNYKF 231 (397)
T ss_dssp CTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEC-TTGGGTGGGCCGGGCCTTCCCCC
T ss_pred CCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEc-cccchhhhhcccccccccccccc
Confidence 3 4555 556 8999999988 679999999999999999999999953 3332211 1 021
Q ss_pred Cc--cceEEEecc-ccccccCCCCCCceEEEEEchh-hhhcCC---CceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 234 EL--GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRMMP---GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 234 ~~--GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~~~lp---~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
.+ ++|+++.+. |.++.| .+.|+++++++ +.+.+. +.+.+ .. .....+|.
T Consensus 232 ~~~~~~~~~~~s~~K~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~------------~~~~~~~~ 287 (397)
T 3f9t_A 232 DFSLGVDSITIDPHKMGHCP-----IPSGGILFKDIGYKRYLDVDAPYLTE-------TR------------QATILGTR 287 (397)
T ss_dssp SGGGTCSEEECCTTTTTCCC-----SSCEEEEESSGGGGGGTCEECTTSSS-------SE------------ECSSCSSC
T ss_pred cccccCCeEEEccccccCCC-----CCceEEEEeCHHHHHhhccCCccccC-------CC------------cccccccc
Confidence 22 899999998 544332 24677877664 444441 11000 00 00112333
Q ss_pred CccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCe
Q 002263 307 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMN 386 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~ 386 (946)
+.. ...+..+++ ..++..+++++.++..++++++++.|+++| ++++..+....+.+..++..++.+.|.++||.
T Consensus 288 ~~~---~~~~~~a~~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 361 (397)
T 3f9t_A 288 VGF---GGACTYAVL--RYLGREGQRKIVNECMENTLYLYKKLKENN-FKPVIEPILNIVAIEDEDYKEVCKKLRDRGIY 361 (397)
T ss_dssp CSH---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCCSSSEEEEECTTHHHHHHHHHHTTCB
T ss_pred ccc---hHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEEcCCCccEEEEEeCCHHHHHHHHHhCCeE
Confidence 322 233333333 455678889999999999999999999996 88765555556677766678899999999999
Q ss_pred eeeec-CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 387 LRVVD-SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 387 ~~~~~-~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++... ++.+|++++..+|++|+++++++|.
T Consensus 362 v~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~ 392 (397)
T 3f9t_A 362 VSVCNCVKALRIVVMPHIKREHIDNFIEILN 392 (397)
T ss_dssp CEECSSSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred EeccCCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 87653 5899999999999999999999986
No 26
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=1.3e-21 Score=224.85 Aligned_cols=306 Identities=14% Similarity=0.143 Sum_probs=220.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHh-ccc--cCCCCE-EEEcCCCCHHHHHHHHHhhcCC--Ce
Q 002263 96 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQ--KGKKKT-FIIASNCHPQTIDICITRADGF--DI 169 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~-~~~--~~~gd~-vvv~~~~Hps~~~~~~~~a~~~--gi 169 (946)
|..+.+.++++.+++++|.++.++.++.|+|.++++++.++ .+. +++||+ |+++...|+++...+..+++.. |+
T Consensus 68 ~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~ 147 (416)
T 1qz9_A 68 GWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGY 147 (416)
T ss_dssp SGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSC
T ss_pred hHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCc
Confidence 44466778999999999998778888999998887665543 220 026776 6677789999888776544433 88
Q ss_pred EEEEec-cccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-
Q 002263 170 KVVVSD-LKDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA- 244 (946)
Q Consensus 170 ~v~~~~-~~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~- 244 (946)
+++.++ +++|++ +++++++|++.+| |.+|.+.|+++|.++||++|+++++|. ..+.+... +..++|+|++++|.
T Consensus 148 ~~~~v~~~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~-a~~~g~~~~~~~~~~~d~~~~s~~ 226 (416)
T 1qz9_A 148 TLRLVDSPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDL-AHSAGAVPVDLHQAGADYAIGCTY 226 (416)
T ss_dssp EEEEESSGGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEEC-TTTTTTSCCCHHHHTCSEEEECSS
T ss_pred eEEEeCcHHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEc-cccccCcCCChhhcCCCEEEecCc
Confidence 999998 678877 8889999999998 679999999999999999999999953 34544432 22356899999998
Q ss_pred ccccccCCCCCCce-EEEEEchhhhhcCCCceEeEe-ecC--CCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 245 QRFGVPMGYGGPHA-AFLATSQEYKRMMPGRIVGVS-IDS--SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 245 k~lg~P~~~GGP~~-g~l~~~~~~~~~lp~~~~G~s-~d~--~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
|+| +|||++ |++++++++.+.+.....|+. ... +....|.. .....++..+|.|+. ...++.++
T Consensus 227 K~l-----~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~a~~~a 294 (416)
T 1qz9_A 227 KYL-----NGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEP----SNGIARYLCGTQPIT---SLAMVECG 294 (416)
T ss_dssp STT-----CCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCB----CSSGGGGCCSCCCHH---HHHHHHHH
T ss_pred ccC-----CCCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCC----CcchHHhcCCCCCHH---HHHHHHHH
Confidence 665 356777 999999998877755433320 000 00000110 011122344566653 33344444
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCC----CcCeEEEecCCHHHHHHHHHHcCCeeeeecC
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLP----FFDTVKVKCADAHAIASAAYKIEMNLRVVDS 392 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~----~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~~ 392 (946)
+ .++..+|++++.++..++++++.+.|+++ | +++..+. ....+.+..++..++.+.|.++||.+.....
T Consensus 295 l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~~~~ 371 (416)
T 1qz9_A 295 L--DVFAQTDMASLRRKSLALTDLFIELVEQRCAAHE-LTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGDYREP 371 (416)
T ss_dssp H--HHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECEEETT
T ss_pred H--HHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCC-eEEeCCCCHHHcCCEEEEecCCHHHHHHHHHhCCcEeccCCC
Confidence 4 55656789999999999999999999986 6 8887532 2345667766677899999999998865557
Q ss_pred CeEEEEec-cCCCHHHHHHHHHHHhC
Q 002263 393 NTVTASFD-ETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 393 ~~lris~~-~~~t~edid~ll~~l~~ 417 (946)
+.+|+++. .++|++|+++++++|..
T Consensus 372 ~~lRis~~~~~~t~~~i~~~~~~l~~ 397 (416)
T 1qz9_A 372 RIMRFGFTPLYTTFTEVWDAVQILGE 397 (416)
T ss_dssp TEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CeEEEeCcccCCCHHHHHHHHHHHHH
Confidence 89999998 58999999999999963
No 27
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.89 E-value=9.9e-22 Score=232.35 Aligned_cols=363 Identities=12% Similarity=0.058 Sum_probs=237.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCcc--eeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHH
Q 002263 26 SMKFSKFDEGLTESQMIEHMQKLASMNKVY--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 103 (946)
Q Consensus 26 ~~~lp~~~~~~se~e~~~~~~~l~~~n~~~--~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e 103 (946)
++++| +.+.++.+++++++++...+..+ ..|+|.-+.+...|+.+.+.+.+ .+-.....| ..+.+..+...+
T Consensus 66 ~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~p~f~~~~~~~~~~~~~~~e~l~~--~~~~~~~~~--~~~p~~~~le~~ 139 (511)
T 3vp6_A 66 NLELS--DHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTS--TANTNMFTY--EIAPVFVLMEQI 139 (511)
T ss_dssp CCCCC--SSCCCHHHHHHHHHHHHHTSCCTTSTTEESSSSCCCCHHHHHHHHHHH--HHCCCSSCT--TTCHHHHHHHHH
T ss_pred CCCCC--CCCCCHHHHHHHHHHHhhccCCCCCCCceEeecCCCcHHHHHHHHHHH--HhccCCCCc--ccCchHHHHHHH
Confidence 45677 56899999999999998777543 34777554444445555433332 111111122 245666677777
Q ss_pred HHHHHHHHhCCC--CcceEEcccHHHHHHHHHHHhccc-------cC----CCCEEEEcCCCCHHHHHHHHHhhcCCCe-
Q 002263 104 FQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-------KG----KKKTFIIASNCHPQTIDICITRADGFDI- 169 (946)
Q Consensus 104 ~q~~la~L~g~~--~~~~sl~~~~Ta~~ea~~la~~~~-------~~----~gd~vvv~~~~Hps~~~~~~~~a~~~gi- 169 (946)
...++++++|++ ..++.+++|||.++..++++.+.. ++ ++++|++++..|+++.+.++.+ +.|.
T Consensus 140 ~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~--g~g~~ 217 (511)
T 3vp6_A 140 TLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAAL--GFGTD 217 (511)
T ss_dssp HHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT--TSCGG
T ss_pred HHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHc--CCCCC
Confidence 888999999998 457889999998877665554321 11 4678999999999999988653 2332
Q ss_pred EEEEecc--------ccccc-cCCC------EeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCC-
Q 002263 170 KVVVSDL--------KDIDY-KSGD------VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP- 232 (946)
Q Consensus 170 ~v~~~~~--------~~l~~-i~~~------t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~- 232 (946)
+++.++. ++|++ +.++ +++|++++| |.+|.++|+++|+++||++|++++|++ .++.+.+..+
T Consensus 218 ~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~-a~~~~~~~~~~ 296 (511)
T 3vp6_A 218 NVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA-AWGGGLLMSRK 296 (511)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEE-TTGGGGGGCTT
T ss_pred cEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEc-cchhhHhhChh
Confidence 6666654 45665 5433 889999988 579999999999999999999999954 3344443222
Q ss_pred ------CCccceEEEecc-ccccccCCCCCCceEEEEEchh-hhhc----CCCceEeEeecCCCCcceEEeccccccccc
Q 002263 233 ------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRM----MPGRIVGVSIDSSGKPALRVAMQTREQHIR 300 (946)
Q Consensus 233 ------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~~~----lp~~~~G~s~d~~g~~~~~l~l~tre~~ir 300 (946)
+..+||++++++ |+|++|. ++|+++++++ +++. .++.+.....+. ...+. .+.. .
T Consensus 297 ~~~~~~g~~~aDsv~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~--~~~~~----~~~~--~ 363 (511)
T 3vp6_A 297 HRHKLNGIERANSVTWNPHKMMGVLL-----QCSAILVKEKGILQGCNQMHASYLFQQDKHY--DVSYD----TGDK--A 363 (511)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESSTTHHHHHHCCCCTTTCCSSCSS--CGGGC----CGGG--S
T ss_pred hhhhccCCccCCEEEECcccccCCCc-----CeEEEEEeCHHHHHHHhccCCccccCccccc--ccccC----ccCC--C
Confidence 345789999999 6777664 4678888764 3332 223322110000 00000 0000 0
Q ss_pred ccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CCCcCeEEEecCC------
Q 002263 301 RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD------ 372 (946)
Q Consensus 301 re~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~~~~~~~~i~~~~------ 372 (946)
-+.++. . ..+++.++ +.++|.+|++++.+++.++++++++.|+++.+++++. ++.+..++|....
T Consensus 364 ~~~~r~-~----~al~~~~a--l~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~ 436 (511)
T 3vp6_A 364 IQCGRH-V----DIFKFWLM--WKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGV 436 (511)
T ss_dssp SCSSCC-C----CHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSC
T ss_pred CCCCCc-h----HHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccccc
Confidence 000111 1 11222233 3667999999999999999999999999983399986 5666667775311
Q ss_pred -------------HHHHHHHHHHcCCee-ee--ecC--CeEEEEe-ccCCCHHHHHHHHHHHhC
Q 002263 373 -------------AHAIASAAYKIEMNL-RV--VDS--NTVTASF-DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 -------------~~~v~~~L~~~GI~~-~~--~~~--~~lris~-~~~~t~edid~ll~~l~~ 417 (946)
..++.++|.++|+.+ .. ... +.+|+++ +..+|.+||+++++++..
T Consensus 437 ~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~ 500 (511)
T 3vp6_A 437 PDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIER 500 (511)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 236889999998754 32 122 3599999 789999999999998863
No 28
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.89 E-value=2.8e-21 Score=218.44 Aligned_cols=292 Identities=16% Similarity=0.143 Sum_probs=215.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~-~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
.+.+..+.+.++++.+++++|.+++++.+++|+|.+++.++.++... .++||+|+++...|+++...++.. +..|+++
T Consensus 37 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~~g~~~ 115 (382)
T 4hvk_A 37 YGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFL-QKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHH-HHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHH-HhcCCEE
Confidence 45667788889999999999998888999999998888777665320 028999999999999999887654 3468999
Q ss_pred EEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEE
Q 002263 172 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 240 (946)
Q Consensus 172 ~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~ 240 (946)
+.++. ++|++ +++++++|++.+| |.+|.+.|+++|.++||++|+ +++|. .++.+... +...+|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~-a~~~~~~~~~~~~~~~d~~ 193 (382)
T 4hvk_A 116 EYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDA-TASVGQIEVDVEKIGADML 193 (382)
T ss_dssp EEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEEC-TTTBTTBCCCHHHHTCSEE
T ss_pred EEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEh-HHhcCCCCCCchhcCCCEE
Confidence 88765 34555 7789999999988 679999999999999999999 88853 44555442 2245789999
Q ss_pred EeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 241 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 241 v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
++|.+|+. |++|.|+++++++. .+...+.| + .+..++..+|.|. ....++.++
T Consensus 194 ~~s~~K~~-----g~~g~g~~~~~~~~--~~~~~~~~------~-----------~~~~~~~~~~~~~---~~~~~~~~a 246 (382)
T 4hvk_A 194 TISSNDIY-----GPKGVGALWIRKEA--KLQPVILG------G-----------GQENGLRSGSENV---PSIVGFGKA 246 (382)
T ss_dssp EEESGGGT-----SCTTCEEEEEETTC--CCCCSSCS------S-----------CTGGGTSCSCCCH---HHHHHHHHH
T ss_pred EEeHHHhc-----CCCceEEEEEcCcc--CcCccccc------C-----------CCcCccccCCcCH---HHHHHHHHH
Confidence 99984453 33458899988764 23222211 0 1122344566665 344444444
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--C-cCeEEEecCC--HHHHHHHHHHcCCeeeeec----
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRVVD---- 391 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~-~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~---- 391 (946)
+ .+ ..++++++.++..++++++.+.|++++++++.... . .+.+.+..++ ..++.+.|.++||.++.-.
T Consensus 247 l--~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~ 323 (382)
T 4hvk_A 247 A--EI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSS 323 (382)
T ss_dssp H--HH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC-----
T ss_pred H--HH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCC
Confidence 4 22 24688999999999999999999988448887432 1 2345666554 7889999999999875311
Q ss_pred -------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 -------------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 -------------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++.+|++++..+|++|+++++++|+.
T Consensus 324 ~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~ 368 (382)
T 4hvk_A 324 KTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG 368 (382)
T ss_dssp ---CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999974
No 29
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.89 E-value=1.7e-21 Score=218.73 Aligned_cols=363 Identities=14% Similarity=0.167 Sum_probs=238.1
Q ss_pred CCCccCCCCCHHHHHHHHHHHHcCccCcCCccccceeeecCCCccccccc---ccCcc--cc-------ccCCCCccccc
Q 002263 448 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP---VTWPS--FA-------NIHPFAPADQA 515 (946)
Q Consensus 448 ~~p~~~~~~se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~---~~~~~--f~-------~~~p~~p~e~~ 515 (946)
.+| +.|++|..|.-.+.+|+..|.....+-++.| . ...++. +.+.. |. ++..-|| . +
T Consensus 40 ~~P--~~g~~d~~ie~~l~~la~mdsnn~~~~~g~G--E-----RE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QP-K-A 108 (501)
T 3hl2_A 40 KCP--ENGWDESTLELFLHELAIMDSNNFLGNCGVG--E-----REGRVASALVARRHYRFIHGIGRSGDISAVQP-K-A 108 (501)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHTTBGGGCSSCCCCS--S-----CCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCT-T-B
T ss_pred CCC--ccCCCHHHHHHHHHHHHhhccCCCcccCCcc--c-----chHHHHHHHHHhhccCcccCCCCccccccCCC-C-c
Confidence 456 6899999999999999999865322223222 1 111111 11111 21 1344555 1 2
Q ss_pred ccHHHHHHH-----HHHHHHHhhCCCcc--cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHc
Q 002263 516 QGYQEMFNN-----LGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMC 588 (946)
Q Consensus 516 qG~~~~~~e-----l~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~ 588 (946)
.|.. ++.. +..||+.+ |++.. .+.+++++.+..+++++... ..+ .++++||+|+.+|.+..+++.+.
T Consensus 109 aGss-ll~~ltn~l~ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r--~~r--pg~d~VIvpRn~HKSv~kAliL~ 182 (501)
T 3hl2_A 109 AGSS-LLNKITNSLVLDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLR--HKR--PKAKYIIWPRIDQKSCFKSMITA 182 (501)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHH--HHC--TTCCEEEEECCCCHHHHHHHHHT
T ss_pred cchH-HHHHHHHHHHHHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcC--ccc--CCCCEEEEecchHHHHHHHHHHc
Confidence 3421 2222 34567666 99864 46666666667666665421 111 12478999999999999999999
Q ss_pred CCEEEEEcC---CCCCCCCHHHHHHHHHhcC-CCeEEEEEeCCCccc-ccccCHHHHHHHHHHcCCEEEEeccccccccc
Q 002263 589 GMKIVSVGT---DAKGNINIEELRKAAEANR-DNLSTLMVTYPSTHG-VYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 663 (946)
Q Consensus 589 G~~vv~v~~---~~~g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn~~G-~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g 663 (946)
|++.++|+. ++...+|+++|+++|++++ +...+|+.|.+++.| +.+ ||++|+++||+||++++||+||..-+.-
T Consensus 183 Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~d-dI~eIaeIch~~gIpllVDeAhGah~~~ 261 (501)
T 3hl2_A 183 GFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPD-RLEELAVICANYDIPHIVNNAYGVQSSK 261 (501)
T ss_dssp TCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCC-CHHHHHHHHHHHTCCEEEECTTCTTCHH
T ss_pred CCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccc-cHHHHHHHHHHcCCeEEEeCcchhhhhh
Confidence 999999976 3346899999999999875 344444444444433 556 8999999999999999999887432211
Q ss_pred cc-CC---CccC-CCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCC----CCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 664 LT-SP---GYIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPF----LPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 664 l~-~p---g~~G-aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~----lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
.. .| ...| +|+++.|.||++..|+++ +.+++++ ++.+. .||+ -+
T Consensus 262 ~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG-----~ii~~~d~e~l~~~~~~yPGr-------------------~S-- 315 (501)
T 3hl2_A 262 CMHLIQQGARVGRIDAFVQSLDKNFMVPVGG-----AIIAGFNDSFIQEISKMYPGR-------------------AS-- 315 (501)
T ss_dssp HHHHHHHHHHHSCCCEEEEEHHHHHCCCSSC-----EEEEESCHHHHHHHHHTSCSC-------------------BC--
T ss_pred hhhhHHHHHhcCCCcEEEecccccceeecCc-----eEEEeCCHHHHHHHHHhCCCC-------------------CC--
Confidence 11 11 2358 999999999999888664 3555553 33332 2211 01
Q ss_pred ccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---C--CeeeccCCCceeeeEEEecccccccCCCCH
Q 002263 734 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---Y--PILFRGVNGTVAHEFIVDLRGLKNTAGIEP 808 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~--~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~ 808 (946)
++..+..|+.+..+|.+|++++.++.+++++||+++|+++ + +++ ..+.++. .+.+.+..+....+...
T Consensus 316 ----~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll-~~~~n~i--s~a~tl~~~~~~~~~~~ 388 (501)
T 3hl2_A 316 ----ASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLL-HTPHNPI--SLAMTLKTLDEHRDKAV 388 (501)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBC-CCTTCSS--EEEEECTTSCTTTSCHH
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhc-CCCCCce--eEEEecccccccccccH
Confidence 2223457999999999999999999999999999999884 2 232 2222333 35566654432223446
Q ss_pred HHHHHHHHHCCcccC-----CC----------C-------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 809 EDVAKRLMDYGFHGP-----TM----------S-------WPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 809 ~~i~~~L~~~Gi~~~-----~~----------~-------~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+.-.|..+++..+ .- . || ...|.+....-.+++|||.|++.|.+++.+.++
T Consensus 389 t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~-~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~ 463 (501)
T 3hl2_A 389 TQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYP-CAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRK 463 (501)
T ss_dssp HHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCS-SCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCC-chHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 788888988887532 11 1 22 256888888889999999999999999998875
No 30
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.89 E-value=3.2e-21 Score=227.96 Aligned_cols=358 Identities=13% Similarity=0.057 Sum_probs=237.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCc--ceeecCCCCCCCCCcHHHHHHHHhCCcccccc-CCC--hhhhhhhHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNKV--YKSFIGMGYYNTHVPPVILRNIMENPAWYTQY-TPY--QAEIAQGRLESL 101 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~~--~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~-~py--q~e~sqg~l~~l 101 (946)
.++| +++.++.+++++++++...+.. ...|++..+.+ ..|..+.. +|++++ +++ ..+.+.+..+.-
T Consensus 64 ~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~------~~l~~~~n~~~~~~~~~~~~~~le 134 (504)
T 2okj_A 64 LELS--DHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTG-LDIIGLAG------EWLTSTANTNMFTYEIAPVFVLME 134 (504)
T ss_dssp CCCC--SSCCCHHHHHHHHHHHHHTSCCTTCTTEESSSSCC-CCHHHHHH------HHHHHHHCCBSSCTTTCHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHhhccCCCCCCCEEEEccCC-CCHHHHHH------HHHHHhhccCCCchhhChHHHHHH
Confidence 3566 5889999999999998876643 23466544322 24444422 233332 222 234555555556
Q ss_pred HHHHHHHHHHhCCC--CcceEEcccHHHHHHHHHHHhccc-----cCCC-----C-EEEEcCCCCHHHHHHHHHhhcCCC
Q 002263 102 LNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-----KGKK-----K-TFIIASNCHPQTIDICITRADGFD 168 (946)
Q Consensus 102 ~e~q~~la~L~g~~--~~~~sl~~~~Ta~~ea~~la~~~~-----~~~g-----d-~vvv~~~~Hps~~~~~~~~a~~~g 168 (946)
.+..+++++++|++ ..++.+++|||.++..++.+.+.. +.+| + +|+++...|+++.+.++.+ +.|
T Consensus 135 ~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~--g~g 212 (504)
T 2okj_A 135 QITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAAL--GFG 212 (504)
T ss_dssp HHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT--TSC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHc--CCC
Confidence 66779999999998 678999999997777665554310 0124 5 7999999999999988654 235
Q ss_pred e-EEEEecc--------ccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC
Q 002263 169 I-KVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP 231 (946)
Q Consensus 169 i-~v~~~~~--------~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~ 231 (946)
. +++.++. ++|++ +++ ++++|++++| |.+|.+.|+++|+++||++|++++|++ ..+.+.+..
T Consensus 213 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~-a~~~~~~~~ 291 (504)
T 2okj_A 213 TDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA-AWGGGLLMS 291 (504)
T ss_dssp GGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEE-TTGGGGGGC
T ss_pred cccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEeh-hhhhHHHhC
Confidence 4 6777665 34554 543 5899999998 679999999999999999999999953 223322211
Q ss_pred -------CCCccceEEEecc-ccccccCCCCCCceEEEEEchh-hhh----cCCCceEeEeecCCCCcceEEeccccc-c
Q 002263 232 -------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKR----MMPGRIVGVSIDSSGKPALRVAMQTRE-Q 297 (946)
Q Consensus 232 -------~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~~----~lp~~~~G~s~d~~g~~~~~l~l~tre-~ 297 (946)
.+-.++|+++.++ |++++|. ++|+++++++ +++ ..++.+.+...+ .++.+++.++. +
T Consensus 292 ~~~~~~~~g~~~~D~i~~~~hK~~~~p~-----~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~ 362 (504)
T 2okj_A 292 RKHRHKLNGIERANSVTWNPHKMMGVLL-----QCSAILVKEKGILQGCNQMCAGYLFQPDKQ----YDVSYDTGDKAIQ 362 (504)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESSTTHHHHHHCCCCSSSCCSCCS----SCGGGCCGGGSSC
T ss_pred HhhHhhcCCcccCCEEEECchhhcCCCc-----ceEEEEEECHHHHHHHhcCCCccccCCccc----ccCcCCcccCCCC
Confidence 2224899999998 6655553 3789999874 544 345555432111 01111222222 4
Q ss_pred cccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CCCcCeEEEec-CC--
Q 002263 298 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKC-AD-- 372 (946)
Q Consensus 298 ~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~~~~~~~~i~~-~~-- 372 (946)
..||.. +..+++. +..+|.+|++++.+++.+++++|.+.|+++.+++++. ++....|+|.. +.
T Consensus 363 ~~rr~~-------~l~~~a~-----l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~ 430 (504)
T 2okj_A 363 CGRHVD-------IFKFWLM-----WKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSL 430 (504)
T ss_dssp SSCBCC-------HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGG
T ss_pred CCCCcc-------HHHHHHH-----HHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccc
Confidence 445531 1223322 2556789999999999999999999999983399986 45555666643 11
Q ss_pred ----------------HHHHHHHHHHcCC-eeee--ecC--CeEEEEec-cCCCHHHHHHHHHHHhC
Q 002263 373 ----------------AHAIASAAYKIEM-NLRV--VDS--NTVTASFD-ETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 ----------------~~~v~~~L~~~GI-~~~~--~~~--~~lris~~-~~~t~edid~ll~~l~~ 417 (946)
..++.++|.++|+ .+.. ... +.+|+|++ .++|++||++++++|..
T Consensus 431 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~ 497 (504)
T 2okj_A 431 RGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIER 497 (504)
T ss_dssp SSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 3578889999996 4432 222 57999997 89999999999999863
No 31
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.89 E-value=3.6e-21 Score=218.35 Aligned_cols=317 Identities=15% Similarity=0.142 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHhhCCC-cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC--CHHHHHHcCCEEEE
Q 002263 519 QEMFNNLGEWLCTITGFD-SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT--NPATAAMCGMKIVS 594 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~-~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~--~~~~a~~~G~~vv~ 594 (946)
.+...++++++++++|.+ .. .+.+++|+++...++.++ . .++++|+++...|.. ....+...|++++.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l---~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 123 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNG---V-----SKGGKVLVTIIGAFGKRYKEVVESNGRKAVV 123 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHH---S-----CTTCEEEEEESSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHh---h-----cCCCeEEEEcCCchhHHHHHHHHHhCCceEE
Confidence 567888999999999997 33 456677776664444332 1 246889998887765 45557789999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCC
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
++.++++.+|+++|++++++. +++++|++++| |.+|.+. ++++|+++|+++|+++++|+++...... .....++.|
T Consensus 124 v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~a~~~~~~~-~~~~~~~~d 200 (386)
T 2dr1_A 124 LEYEPGKAVKPEDLDDALRKN-PDVEAVTITYNETSTGVLN-PLPELAKVAKEHDKLVFVDAVSAMGGAD-IKFDKWGLD 200 (386)
T ss_dssp EECCTTCCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEEC-CHHHHHHHHHHTTCEEEEECTTTBTTBC-CCTTTTTCS
T ss_pred EecCCCCCCCHHHHHHHHhcC-CCCcEEEEEeecCCcchhC-CHHHHHHHHHHcCCeEEEEccccccCcc-ccccccCCc
Confidence 999888899999999999642 57899999988 5789998 7999999999999999999987532211 233456899
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC-CccccCCCCCC--CCCC-CCCCCcccCccchhhHHHHHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPA--PEKS-QPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~-~~v~~~~d~~~--~~~~-~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
+++.++||+|+.| +|+|++++++++.+.+.. ...++..++.. .... +.....+. +.....++.+.+.
T Consensus 201 i~~~s~sK~~~~~-----~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~~l~ 271 (386)
T 2dr1_A 201 VVFSSSQKAFGVP-----PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTP----PMPQVFGINVALR 271 (386)
T ss_dssp EEEEETTSTTCCC-----SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCC----CHHHHHHHHHHHH
T ss_pred EEEEeccccccCC-----CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCC----CHHHHHHHHHHHH
Confidence 9999999999533 258999999876554321 11111000000 0000 00001111 2223334455666
Q ss_pred HHcHh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC
Q 002263 750 MMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 826 (946)
Q Consensus 750 ~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~ 826 (946)
.+..+ |+.+..++...+++++.+.|++. +.+. .+.+ ...+.+.+.++ .+.+..++.++|.++||.+....
T Consensus 272 ~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi~v~~~~ 344 (386)
T 2dr1_A 272 IIEKMGGKEKWLEMYEKRAKMVREGVREIGLDIL--AEPGHESPTITAVLTP-----PGIKGDEVYEAMRKRGFELAKGY 344 (386)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBS--SCTTCBCSSEEEEECC-----TTCCHHHHHHHHHHTTEECEECC
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeC--cCccccCCceEEEEcC-----CCCCHHHHHHHHHHCCeEEecCc
Confidence 66666 68888888889999999999875 4432 1111 11223456654 24678899999999999874322
Q ss_pred CC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 WP-VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 ~p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.+ ..+.+||+++..+|++|+++++++|+++++++..
T Consensus 345 ~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 345 GSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp GGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 22 3579999999888999999999999999888754
No 32
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.89 E-value=3.2e-21 Score=220.74 Aligned_cols=348 Identities=16% Similarity=0.115 Sum_probs=236.1
Q ss_pred CCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCc-cc-cccCCChhhhhhhHHHHHHHHHHHHHHHhC
Q 002263 36 LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPA-WY-TQYTPYQAEIAQGRLESLLNFQTMIADLTG 113 (946)
Q Consensus 36 ~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~-~~-t~~~pyq~e~sqg~l~~l~e~q~~la~L~g 113 (946)
..-.+++++|+.+.. +..+.++.+.+ ..|+.+.+.+.+... +. ...+.|. .+++..+.+.++++.+++++|
T Consensus 11 ~~~~~~r~~fp~~~~-~~~~ld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~la~~~g 83 (406)
T 3cai_A 11 YDVARVRGLHPSLGD-GWVHFDAPAGM----LIPDSVATTVSTAFRRSGASTVGAHP--SARRSAAVLDAAREAVADLVN 83 (406)
T ss_dssp CCHHHHHHTCTTTTS-SCEECBGGGCC----CCCHHHHHHHHHHHHHCCSSSCSSSH--HHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHhhhhcCC-CeEEEeCCCcC----CCCHHHHHHHHHHHHhcCCCCCCccH--HHHHHHHHHHHHHHHHHHHhC
Confidence 445566777765531 23333333332 456666555543211 00 0001121 233445678889999999999
Q ss_pred CCCcceEEcccHHHHHHHHHHHh--ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---------cccc-
Q 002263 114 LPMSNASLLDEGTAAAEAMAMCN--NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---------DIDY- 181 (946)
Q Consensus 114 ~~~~~~sl~~~~Ta~~ea~~la~--~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---------~l~~- 181 (946)
.++.++.+++|+|.+++.++.++ .+. +||+|+++...|+++...+..+++..|++++.++++ +|++
T Consensus 84 ~~~~~v~~~~g~t~al~~~~~~l~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~ 161 (406)
T 3cai_A 84 ADPGGVVLGADRAVLLSLLAEASSSRAG--LGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESL 161 (406)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHTGGGGB--TTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHH
T ss_pred CCCCeEEEeCChHHHHHHHHHHHhhccC--CCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHH
Confidence 98788999999998888776665 233 789999999999999888776555468888887653 4555
Q ss_pred cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceE
Q 002263 182 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAA 259 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g 259 (946)
+++++++|++++| |.+|.+.|+++|.++|+++|+++++|. ..+.+... +..++|+|++++|.+|+. | |++|
T Consensus 162 l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~-a~~~g~~~~~~~~~~~d~~~~s~~K~~-----g-~~~G 234 (406)
T 3cai_A 162 ISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDH-SAAAPYRLLDIRETDADVVTVNAHAWG-----G-PPIG 234 (406)
T ss_dssp CCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEEC-TTTTTTCCCCHHHHCCSEEEEEGGGGT-----S-CSCE
T ss_pred hCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEc-ccccCCCCCCchhcCCCEEEeehhhhc-----C-CCcC
Confidence 7788999999998 679999999999999999999999953 34444332 224578999999983342 2 3467
Q ss_pred -EEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH-HHHHhCh---------
Q 002263 260 -FLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM-YAVYHGP--------- 328 (946)
Q Consensus 260 -~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~-y~~~~g~--------- 328 (946)
++++++++.+++..... . .+ ..+..+.+.+|.|.. ...++.+++ ++...|.
T Consensus 235 ~~~~~~~~~~~~l~~~~~----~-~~----------~~~~~~~~~~t~~~~---~~~a~~~al~~~~~~g~~~~~~~~~~ 296 (406)
T 3cai_A 235 AMVFRDPSVMNSFGSVST----N-PY----------ATGPARLEIGVHQFG---LLAGVVASIEYLAALDESARGSRRER 296 (406)
T ss_dssp EEEESCHHHHHTSCCCCS----C-TT----------CCGGGGGCCSCCCHH---HHHHHHHHHHHHHTSSTTCCSSHHHH
T ss_pred eEEEEehHHHhhcCCccc----C-CC----------CCccccccCCCccHH---HHHHHHHHHHHHHHhccccccchhhh
Confidence 99999988877632210 0 00 011223445776663 333444444 2222221
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--CcCeEEEecCC--HHHHHHHHHHcCCeeeeec-----------
Q 002263 329 --EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD----------- 391 (946)
Q Consensus 329 --~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~----------- 391 (946)
++++++.++..++++++.+.|+++.++++..+. ....+.+.+++ ..++.+.|.++||.++...
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~ 376 (406)
T 3cai_A 297 LAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVN 376 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBCHHHHHHHHHHTTEECEECCSCHHHHHHTTT
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcCHHHHHHHHHHCCcEEecCChHHHHHHcCCC
Confidence 147889999999999999999998338887532 23346666654 7889999999999886421
Q ss_pred --CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 --SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 --~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+|++++.++|++|+++++++|+.
T Consensus 377 ~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 377 DVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp TTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred CCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999964
No 33
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.89 E-value=9.2e-22 Score=222.19 Aligned_cols=317 Identities=12% Similarity=0.082 Sum_probs=221.8
Q ss_pred CCCCcHHHHHHHHhCCcccccc--CCCh----hhhhhhHHHHHHHHHHHHHHHhCCCC-cceEEc-ccHHHHHHHHHHHh
Q 002263 65 NTHVPPVILRNIMENPAWYTQY--TPYQ----AEIAQGRLESLLNFQTMIADLTGLPM-SNASLL-DEGTAAAEAMAMCN 136 (946)
Q Consensus 65 ~~~~p~~i~~~i~~~~~~~t~~--~pyq----~e~sqg~l~~l~e~q~~la~L~g~~~-~~~sl~-~~~Ta~~ea~~la~ 136 (946)
...+|+.|.+.+... +..| +|.. ...++...+.+.++++.+++|+|++. .++.++ .++|.++++++..+
T Consensus 21 ~~~~p~~Vl~a~~~~---~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l 97 (377)
T 3e77_A 21 QSMLPHSVLLEIQKE---LLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNL 97 (377)
T ss_dssp SCCCCHHHHHHHHHT---SSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHH---HHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhc
Confidence 456898888787753 2222 1111 11345567899999999999999975 457674 78998888776655
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHH
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDF 206 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i 206 (946)
. ..++||++++....|.+. .|...++..|+++++++. ++++. ++++|++|++++. |.+|++.|+
T Consensus 98 ~-~~~~Gd~v~~~~~g~~~~--~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi--- 171 (377)
T 3e77_A 98 I-GLKAGRCADYVVTGAWSA--KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF--- 171 (377)
T ss_dssp G-GGSTTCEEEECCCSHHHH--HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS---
T ss_pred c-CCCCCCeEEEEECCHHHH--HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh---
Confidence 3 212489999888877664 455567788988887654 33444 7889999988864 789999999
Q ss_pred HHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCC
Q 002263 207 IKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGK 285 (946)
Q Consensus 207 ~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~ 285 (946)
+++++|++++||+ ..+++.++ +..+|| ++++++||+.+| ||+|++++|+++++++++..
T Consensus 172 --i~~~~~~~~~vD~-~q~~g~~~id~~~~~--~~~~s~~K~~gp-----~G~g~l~~~~~~l~~~~~~~---------- 231 (377)
T 3e77_A 172 --IPDVKGAVLVCDM-SSNFLSKPVDVSKFG--VIFAGAQKNVGS-----AGVTVVIVRDDLLGFALREC---------- 231 (377)
T ss_dssp --CCCCTTCCEEEEC-TTTTTSSCCCGGGCS--EEEEEGGGTTSC-----TTCEEEEEETTSCSCCCTTS----------
T ss_pred --hhccCCCEEEEEc-ccccCCCCCchhhcC--EEEEecccccCC-----CccEEEEEcHHHHhhccCCC----------
Confidence 4778999999954 34666543 456777 477888555234 57899999999987775432
Q ss_pred cceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-C--C
Q 002263 286 PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-L--P 361 (946)
Q Consensus 286 ~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~--~ 361 (946)
+.| +++....+ ..+..+|+|+ .+++++.+++ .++-.+ |++++.+|..+++++|+++|++++|+.+.. . .
T Consensus 232 p~~-~~~~~~~~-~~~~~~Tp~v---~~i~~l~~al--~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~ 304 (377)
T 3e77_A 232 PSV-LEYKVQAG-NSSLYNTPPC---FSIYVMGLVL--EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQN 304 (377)
T ss_dssp CGG-GCHHHHHT-TTTCSSCCCH---HHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGG
T ss_pred Cch-hhHHHHhh-cCCCCCCchH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHH
Confidence 111 11111101 1123578887 5777777776 666677 899999999999999999999983387642 1 2
Q ss_pred CcC-eEEEecCC--H-----HHHHHHHHHcCCeeeee--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 362 FFD-TVKVKCAD--A-----HAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 362 ~~~-~~~i~~~~--~-----~~v~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.. .++|++++ + ..+.+.|.++||.++.- ..+.+|+|+..+||++||++|+++|+.
T Consensus 305 rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~ 370 (377)
T 3e77_A 305 RSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKK 370 (377)
T ss_dssp BCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 233 36777664 1 35677778899987532 236799999999999999999999973
No 34
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.89 E-value=6.2e-21 Score=215.55 Aligned_cols=310 Identities=13% Similarity=0.150 Sum_probs=210.5
Q ss_pred cHHHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHH---cCCEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM---CGMKI 592 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~---~G~~v 592 (946)
+..+.+.++++++++++|.+.. .+..++|+++...++.++..+... ++++|+++...|+++...+.. .|+++
T Consensus 40 ~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~----~gd~vi~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4hvk_A 40 KAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNAR----KGKHILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGG----GCCEEEEETTCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcC----CCCEEEECCCCcHHHHHHHHHHHhcCCEE
Confidence 4556788999999999999754 345566666665444443321112 458899999888877665444 69999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+.+++++++.+|+++|+++++ +++++|++++| |.+|.+. ++++|.++|+++|+ +++|+++..+... .....+|
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~-li~D~a~~~~~~~-~~~~~~~ 189 (382)
T 4hvk_A 116 EYIPVGKYGEVDVSFIDQKLR---DDTILVSVQHANNEIGTIQ-PVEEISEVLAGKAA-LHIDATASVGQIE-VDVEKIG 189 (382)
T ss_dssp EEECBCTTSCBCHHHHHHHCC---TTEEEEECCSBCTTTCBBC-CHHHHHHHHSSSSE-EEEECTTTBTTBC-CCHHHHT
T ss_pred EEeccCCCCCcCHHHHHHHhc---cCceEEEEECCCCCceeeC-CHHHHHHHHHHcCE-EEEEhHHhcCCCC-CCchhcC
Confidence 999999899999999999996 78999999998 4689998 79999999999999 9999986532211 1122458
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
+|++++++||++ |++|+|+++++++. .+.....+... ......++.+ ...+....+.+. +
T Consensus 190 ~d~~~~s~~K~~------g~~g~g~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~--------~~~~~~~~~al~-~ 249 (382)
T 4hvk_A 190 ADMLTISSNDIY------GPKGVGALWIRKEA--KLQPVILGGGQ---ENGLRSGSEN--------VPSIVGFGKAAE-I 249 (382)
T ss_dssp CSEEEEESGGGT------SCTTCEEEEEETTC--CCCCSSCSSCT---GGGTSCSCCC--------HHHHHHHHHHHH-H
T ss_pred CCEEEEeHHHhc------CCCceEEEEEcCcc--CcCcccccCCC---cCccccCCcC--------HHHHHHHHHHHH-H
Confidence 999999999965 34568899988754 22111111100 0000011111 111222223333 2
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-C-C
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-P 828 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~-p 828 (946)
..+++.+..++...+++++.+.|++...+....+.+ ...+.+.+.++ +.+..++.+.|.++||.+.... + +
T Consensus 250 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~v~~g~~~~~ 323 (382)
T 4hvk_A 250 TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS------YIEGESIVLSLDMAGIQASTGSACSS 323 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET------TCCHHHHHHHHHHTTCBCBCC-----
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC------CCCHHHHHHHHHHCCEEEeeCCccCC
Confidence 346778888888899999999998753332222111 11123444443 4678899999999999875321 1 0
Q ss_pred -------------C-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 829 -------------V-----PGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 829 -------------~-----~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
. .+.+|++++..+|++|+++++++|+++++++++
T Consensus 324 ~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 324 KTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp ---CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 478999999999999999999999999988876
No 35
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.89 E-value=9.7e-21 Score=224.33 Aligned_cols=356 Identities=14% Similarity=0.125 Sum_probs=244.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCc-c--eeecCCCCCCCC-CcHHHHHHHHhCCccccccCCChhhhhhhHHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTH-VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLL 102 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~~-~--~~~~G~g~~~~~-~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~ 102 (946)
..+| ++++++.+++++++++...+.. + ..|.|..++... .++.+.+.+.. +...+++++..+++..+...
T Consensus 69 ~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~le~ 142 (514)
T 3mad_A 69 ARLP--RAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYAL----QSQSNPLHPDLWPSTAKFEA 142 (514)
T ss_dssp SSCC--SSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHH----HTTCCTTCTTTCHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHH----HhhcCCcccccChHHHHHHH
Confidence 4566 6899999999999998765532 2 234554443322 33334333221 23335566666777788888
Q ss_pred HHHHHHHHHhCCCC--cce--EEcccHHHHHHHHHHHhcccc----C-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 103 NFQTMIADLTGLPM--SNA--SLLDEGTAAAEAMAMCNNIQK----G-KKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 103 e~q~~la~L~g~~~--~~~--sl~~~~Ta~~ea~~la~~~~~----~-~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
++++++++++|++. .++ .+++|||.+++.++.+++... + ++|+|+++...|+++...++. .|++++.
T Consensus 143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~----~G~~v~~ 218 (514)
T 3mad_A 143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQY----FGIKLVR 218 (514)
T ss_dssp HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHH----HTCEEEE
T ss_pred HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHH----cCCeeEE
Confidence 89999999999984 455 899999988888776654210 0 238999999999998888754 4788888
Q ss_pred ecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCcc---------ccC---CCC
Q 002263 174 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLA---------LTI---LKP 231 (946)
Q Consensus 174 ~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~a---------l~~---l~~ 231 (946)
++. ++|++ +++++++|++++| |.+|.+.|+++|.++|+++|++++++. .++ .+. ...
T Consensus 219 v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDe-a~~~~~~~~~~~~g~~~~~~~ 297 (514)
T 3mad_A 219 TPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDA-CLGGFILPWAERLGYPVPPFD 297 (514)
T ss_dssp ECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEEC-TTTTTTHHHHHHTTCCCCCCS
T ss_pred eeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEec-ccccccchhHHhcCCCCCccc
Confidence 765 34666 7889999999998 469999999999999999999999953 222 111 112
Q ss_pred CCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccc
Q 002263 232 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 310 (946)
Q Consensus 232 ~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t 310 (946)
....|+|++++++ |++ +||++.|+++++++..+....... .+..+.. + ... ...+|.+.
T Consensus 298 ~~~~g~d~~~~s~~K~l-----~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~-~-~~~--------~~~gs~~~-- 357 (514)
T 3mad_A 298 FRLEGVTSVSADTHKYG-----YGAKGTSVILYRRPDLLHYQYFIA---ADWPGGL-Y-FSP--------TFAGSRPG-- 357 (514)
T ss_dssp TTSTTCCEEEECTTTTT-----CCCSSCEEEEESSHHHHTTTCEEE---SSCTTCS-E-EES--------SSCSSCCH--
T ss_pred ccCCCCcEEEECchhcc-----CCCCCeEEEEEeCHHHhccccccc---cccCCCc-c-cCC--------ccCCCCch--
Confidence 3467999999998 554 345568999998876655432211 1111111 0 000 01223232
Q ss_pred hHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeee
Q 002263 311 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLR 388 (946)
Q Consensus 311 ~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~ 388 (946)
....++.+++ ..++.+|++++.+++.++++++++.|+++++++++..+.. .+.+...+ ..++.++|.++||.+.
T Consensus 358 -~~~~a~~aal--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~Gi~v~ 433 (514)
T 3mad_A 358 -ALSATAWAAM--LSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDELNIYQVMEEMAGRGWRLN 433 (514)
T ss_dssp -HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSSCHHHHHHHHHTTTCBCE
T ss_pred -HHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCCCHHHHHHHHHhcCCEec
Confidence 2223333343 6778889999999999999999999999833888754422 45565544 7899999999999885
Q ss_pred eec-CCeEEEEeccC-CCHHHHHHHHHHHhC
Q 002263 389 VVD-SNTVTASFDET-TTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 ~~~-~~~lris~~~~-~t~edid~ll~~l~~ 417 (946)
... ++.+|++++.. ++++++++++++|+.
T Consensus 434 g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~ 464 (514)
T 3mad_A 434 GLHRPPAFHVALTLRHTEPGVVDRFLADLQD 464 (514)
T ss_dssp EETTTTEEEEECCGGGGSTTHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEecCCCCHHHHHHHHHHHHH
Confidence 443 67899999965 456999999999974
No 36
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.89 E-value=1.2e-21 Score=224.47 Aligned_cols=315 Identities=13% Similarity=0.096 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHhhCCCcc--cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC--CHHHHHHcCCEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT--NPATAAMCGMKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~--~~~~a~~~G~~vv 593 (946)
..+...++++++++++|.+.. .+.+++|+++...++.++ . .++++|+++...|.+ ....+...|++++
T Consensus 44 ~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~---~-----~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~ 115 (411)
T 3nnk_A 44 MTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSA---I-----RPGDKVLVPVFGRFGHLLCEIARRCRAEVH 115 (411)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHH---C-----CTTCEEEEEECSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHh---c-----CCCCEEEEecCCchHHHHHHHHHHcCCeEE
Confidence 346678899999999998854 345566776664444333 1 256899998876644 4455778999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIG 671 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~G 671 (946)
.++++.++.+|+++|++++++ .++++|++++| |.+|.+. ++++|+++|+++|+++++|+++.. +.. .....+|
T Consensus 116 ~v~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~Dea~~~--~~~~~~~~~~~ 190 (411)
T 3nnk_A 116 TIEVPWGEVFTPDQVEDAVKR--IRPRLLLTVQGDTSTTMLQ-PLAELGEICRRYDALFYTDATASL--GGNPLETDVWG 190 (411)
T ss_dssp EEECCTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEEC-CCTTHHHHHHHHTCEEEEECTTTB--TTBCCCTTTTT
T ss_pred EEecCCCCCCCHHHHHHHHhh--CCCeEEEEeCCCCCcceec-cHHHHHHHHHHcCCEEEEECCccc--CCcccchhccC
Confidence 999988899999999999973 27889999998 5789998 799999999999999999998643 222 1234568
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCC------ccccCCCCCC--CCC--------------CCCCCC
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH------PVVSTGGIPA--PEK--------------SQPLGT 729 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~------~v~~~~d~~~--~~~--------------~~~~~~ 729 (946)
+|++++++||+|+ |++|+|++++++++.+.+... ..|.....|. ..+ .... .
T Consensus 191 ~d~~~~s~~K~l~-----~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~ 264 (411)
T 3nnk_A 191 LDAVSAGMQKCLG-----GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERL-N 264 (411)
T ss_dssp CSEEECCSTTTTC-----CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCC-C
T ss_pred CcEEEecCccccC-----CCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccC-C
Confidence 9999999999974 456789999987654322110 0000000000 000 0000 0
Q ss_pred cccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCH
Q 002263 730 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEP 808 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~ 808 (946)
..+ .+...+..+.+.+..+..+|+.+..++...+++++.+.|++. +.+..+ ......+.+.+.++ .+.+.
T Consensus 265 ~~~---~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~-----~~~~~ 335 (411)
T 3nnk_A 265 HHT---EATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGD-LKHKMNNVLGVVIP-----QGING 335 (411)
T ss_dssp CSC---CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSC-GGGBCSSEEEEECC-----TTCCH
T ss_pred CCC---CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCC-cccccccEEEEECC-----CCCCH
Confidence 001 012223334455666777788888888889999999999875 443211 11111223445553 25678
Q ss_pred HHHHHHHHHC-CcccCCCCCC-CCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHH
Q 002263 809 EDVAKRLMDY-GFHGPTMSWP-VPGTLMIEP-TESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 809 ~~i~~~L~~~-Gi~~~~~~~p-~~~~lri~~-t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.++.++|.++ ||.+.....+ .++.+||++ ...+|++|+++++++|+++++++
T Consensus 336 ~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 336 DQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp HHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 9999999876 9986422112 257999998 66778999999999999998764
No 37
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.88 E-value=1.7e-21 Score=220.66 Aligned_cols=316 Identities=10% Similarity=0.059 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHhhCCCc--c-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G~~v 592 (946)
..+...++++++++++|.+. . .+.+++|+++.. ++.++ .+++++|+++...|.++. ..+...|+++
T Consensus 33 ~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~--------~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~ 103 (384)
T 3zrp_A 33 FVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSL--------LKPNDKILVVSNGVFGDRWEQIFKRYPVNV 103 (384)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGG--------CCTTCEEEEECSSHHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhh--------cCCCCEEEEecCCcchHHHHHHHHHcCCcE
Confidence 45678899999999999886 3 355566666654 33222 135688998877653322 3356789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+.+++++++.+|+++|++++++ .++++|++++| |.+|.+. ++++|.++|+++|+++++|+++..+... .....++
T Consensus 104 ~~v~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~a~~~~~~~-~~~~~~~ 179 (384)
T 3zrp_A 104 KVLRPSPGDYVKPGEVEEEVRK--SEYKLVALTHVETSTGVRE-PVKDVINKIRKYVELIVVDGVSSVGAEE-VKAEEWN 179 (384)
T ss_dssp EEECCSTTCCCCHHHHHHHHHH--SCEEEEEEESEETTTTEEC-CHHHHHHHHGGGEEEEEEECTTTTTTSC-CCTTTTT
T ss_pred EEecCCCCCCCCHHHHHHHHHh--CCCcEEEEeCCCCCCceEC-cHHHHHHHHHhcCCEEEEECcccccCcc-ccccccC
Confidence 9999998999999999999983 37999999998 5789998 7999999999999999999986422211 1233568
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCC-CC-CccccCCCCCCC----CC-CC-CCCCcccCccchhhHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PS-HPVVSTGGIPAP----EK-SQ-PLGTIAAAPWGSALILPI 743 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~l-p~-~~v~~~~d~~~~----~~-~~-~~~~i~~~~~g~~~~~~~ 743 (946)
+|++++++||+|+ |++|+|++++++++.+.+ .. ...+...+.... .. +. ......+. +...+..
T Consensus 180 ~d~~~~s~~K~~~-----~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~a 251 (384)
T 3zrp_A 180 VDVYLTASQKALG-----SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATP---PVHVILQ 251 (384)
T ss_dssp CSEEEEETTSTTC-----CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCC---CHHHHHH
T ss_pred CCEEEecCccccc-----CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCC---CHHHHHH
Confidence 9999999999984 457799999998765544 11 100000000000 00 00 00000010 1222233
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
..+.+..+..+|+.+..++...+++++.+.|++. +.+..+.......+.+.+.++ +.+..++.++|.++||.+
T Consensus 252 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~v 325 (384)
T 3zrp_A 252 LAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILK------VADPQKVLAGTVNEGVEF 325 (384)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECS------SSCHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECC------CCCHHHHHHHHHHCCEEE
Confidence 3455666666778888888889999999999886 443221100011222445554 357889999999999987
Q ss_pred CCCC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 823 PTMS-WPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 823 ~~~~-~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.... ++. +.+|+++...+|++|+++++++|++++++++
T Consensus 326 ~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 326 APGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp EECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 5332 333 8899999988999999999999999988764
No 38
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.88 E-value=7e-21 Score=218.52 Aligned_cols=302 Identities=18% Similarity=0.118 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHHhCC-CCcceEEcccHHHHHHHHHHHhc---cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 98 LESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNN---IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 98 l~~l~e~q~~la~L~g~-~~~~~sl~~~~Ta~~ea~~la~~---~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
.+.+.++++.+++++|. ++.++.+++|||.+++.++.+++ .. +||+|+++...|+++..++...++..|++++.
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLK--AGDEIITTVMEHHSNLVPWQMVAAKTGAVLKF 148 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCC--TTCEEEEETTCCGGGTHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccC--CCCEEEECcchhHHHHHHHHHHHHhcCcEEEE
Confidence 35567888999999999 67789999999999888877762 33 78999999999999765555445556888888
Q ss_pred ecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEe
Q 002263 174 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 242 (946)
Q Consensus 174 ~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~ 242 (946)
++. +++++ +++++++|++++| |.+|.+.|+++|.++||++|+++++|. ..+.+... +..++|+|++++
T Consensus 149 v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~-a~~~~~~~~~~~~~~~di~~~ 227 (420)
T 1t3i_A 149 VQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDA-CQSAPHYPLDVQLIDCDWLVA 227 (420)
T ss_dssp ECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEEC-TTTTTTSCCCHHHHTCSEEEE
T ss_pred eccCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEh-hhccCCccCchhhcCCCEEEE
Confidence 765 34555 7788999999988 679999999999999999999999953 44554432 334578999999
Q ss_pred ccccccccCCCCCCceEEEEEchhhhhcCCCceEeEe-ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 243 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS-IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 243 s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s-~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|.+|+. |++|+|++++++++.+.+.....++. .+..... ...+ ...+.+.+.+|+++. ...++.+++
T Consensus 228 s~sK~~-----~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~---~~~a~~~al 295 (420)
T 1t3i_A 228 SGHKMC-----APTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFD--HFTT--GELPHKFEAGTPAIA---EAIALGAAV 295 (420)
T ss_dssp EGGGTT-----SCTTCEEEEECHHHHHHSCCCSCSTTSEEEECSS--CEEE--CCTTGGGCCSSCCHH---HHHHHHHHH
T ss_pred ehhhhc-----CCCceEEEEEchHHHhhcCceecCCCcccccccc--ccCC--CCchhhccCCCccHH---HHHHHHHHH
Confidence 984453 33458999999998877754332210 0000000 0011 112223445666653 333333333
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCC-----CcCeEEEecCC--HHHHHHHHHHcCCeeeee---
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLP-----FFDTVKVKCAD--AHAIASAAYKIEMNLRVV--- 390 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~-----~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~--- 390 (946)
.++...|++++.++..++++++.+.|+++ | +++.... ....+.+.+++ ..++.+.|.++||.++..
T Consensus 296 --~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~ 372 (420)
T 1t3i_A 296 --DYLTDLGMENIHNYEVELTHYLWQGLGQIPQ-LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHC 372 (420)
T ss_dssp --HHHHHHCHHHHHHHHHHHHHHHHHHHHTCTT-EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTT
T ss_pred --HHHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-eEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeecccc
Confidence 44444578899999999999999999998 6 9887432 23345555554 778999999999988643
Q ss_pred --------c-CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 --------D-SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 --------~-~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. ++.+|+|++.+++++|+++++++|..
T Consensus 373 ~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~ 408 (420)
T 1t3i_A 373 TQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQA 408 (420)
T ss_dssp CHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHH
T ss_pred chHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHH
Confidence 1 57899999999999999999999963
No 39
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.88 E-value=4.9e-21 Score=219.69 Aligned_cols=314 Identities=13% Similarity=0.094 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHhhCCCccc-c-cCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC--CHHHHHHcCCEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSFS-L-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT--NPATAAMCGMKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~-l-~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~--~~~~a~~~G~~vv 593 (946)
..+...++++++++++|.+... + .+++|+++...++.++ . .++++|+++...|.+ ....+...|++++
T Consensus 42 ~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l---~-----~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~ 113 (416)
T 3isl_A 42 FTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASV---I-----EPEDDVLIPIYGRFGYLLTEIAERYGANVH 113 (416)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHH---C-----CTTCEEEEEESSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHh---c-----CCCCEEEEecCCcccHHHHHHHHhcCCeeE
Confidence 3466789999999999987642 3 5666766664443332 1 356899998876654 3345778899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIG 671 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~G 671 (946)
.+++++++.+|+++|++++++ +++++|++++| |.+|.+. |+++|+++|+++|+++++|+++.. +.+ .....+|
T Consensus 114 ~v~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~a~~~--~~~~~~~~~~~ 188 (416)
T 3isl_A 114 MLECEWGTVFDPEDIIREIKK--VKPKIVAMVHGETSTGRIH-PLKAIGEACRTEDALFIVDAVATI--GGCEVKVDEWK 188 (416)
T ss_dssp EEECCTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEEC-CCHHHHHHHHHTTCEEEEECTTTT--TTSCCCTTTTT
T ss_pred EEecCCCCCCCHHHHHHHHhh--CCCcEEEEEccCCCCceec-CHHHHHHHHHHcCCEEEEECCccc--cCCCcchhhcC
Confidence 999998999999999999973 46789999998 5799998 799999999999999999998642 222 1234568
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCc---cccC--------------CCC-CC----CC--CCCCC
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP---VVST--------------GGI-PA----PE--KSQPL 727 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~---v~~~--------------~d~-~~----~~--~~~~~ 727 (946)
+|++++++||+++ |++|+|++++++++.+.+.... +|+. ... .. +. .....
T Consensus 189 ~d~~~~s~~K~l~-----g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 263 (416)
T 3isl_A 189 IDAAIGGTQKCLS-----VPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRL 263 (416)
T ss_dssp CSEEECCSSSTTC-----CCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCC
T ss_pred CCEEEecCccccC-----CCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCC
Confidence 9999999999973 5567899999877654332100 0110 000 00 00 00000
Q ss_pred CCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCc-eeeeEEEecccccccCC
Q 002263 728 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGT-VAHEFIVDLRGLKNTAG 805 (946)
Q Consensus 728 ~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~-~~~e~v~~~~~~~~~~g 805 (946)
...+. +...+....+.+..+..+|+.+..++...+++++.+.|++. +.+. .+.+. ..+.+.+.++ .+
T Consensus 264 -~~~~~---~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~-----~~ 332 (416)
T 3isl_A 264 -NHHTE---ATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLF--GDDSCKMPVVTCVEIP-----GG 332 (416)
T ss_dssp -CSSCC---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBC--SCGGGBCTTEEEEECC-----TT
T ss_pred -CCCCC---CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEec--cCccccCCcEEEEeCC-----CC
Confidence 00110 12223334455666667778888888889999999999885 4432 11111 1223445553 24
Q ss_pred CCHHHHHHHHHHC-CcccCCCCCC-CCCEEEEEcCCCCCHHH-HHHHHHHHHHHHHHH
Q 002263 806 IEPEDVAKRLMDY-GFHGPTMSWP-VPGTLMIEPTESESKEE-LDRYCDALISIREEI 860 (946)
Q Consensus 806 ~~~~~i~~~L~~~-Gi~~~~~~~p-~~~~lri~~t~~~t~~e-id~~~~aL~~i~~e~ 860 (946)
.+..++.++|.++ ||.+.....+ ..+.+||+++...+.+| +++++++|+++++++
T Consensus 333 ~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 333 IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 6789999999887 9987532222 35799999977666666 999999999988764
No 40
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.88 E-value=2.5e-21 Score=226.44 Aligned_cols=317 Identities=14% Similarity=0.142 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEE--
Q 002263 520 EMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI-- 592 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~v-- 592 (946)
++..++++++++++|.+... +..++++++.. ++++.+. .+| .++++||++...|+++.. .++..|+++
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~---~~~~~~~-~~~-~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~ 185 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLH---LLMLSFF-KPT-PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE 185 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHH---HHHHHHC-CCC-SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHH---HHHHHhc-ccc-CCCCEEEEcCCcCCchHHHHHHHHHHcCCccee
Confidence 34456889999999998644 34444554443 2333331 233 256789999887766443 356688874
Q ss_pred ---EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC
Q 002263 593 ---VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 593 ---v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg 668 (946)
..+|.+.++.+|+++|+++|+++.+++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...
T Consensus 186 ~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~-~l~~i~~la~~~g~~vi~D~a~~~g~~~~-~~~ 263 (465)
T 3e9k_A 186 SMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHF-NIPAITKAGQAKGCYVGFDLAHAVGNVEL-YLH 263 (465)
T ss_dssp HEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBC-CHHHHHHHHHHTTCEEEEECTTTTTTSCC-CHH
T ss_pred eeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceee-cHHHHHHHHHHcCCEEEEEhhhhcCCcCC-chh
Confidence 445666778999999999998655689999999995 689998 79999999999999999999875322111 123
Q ss_pred ccCCCEEEeCCCcccccCCCCCCC-cceeEEEecccCCCCCCCccccCCC-----C--CC-CCCCCCCCCc-ccCccchh
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGG-----I--PA-PEKSQPLGTI-AAAPWGSA 738 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lp~~~v~~~~d-----~--~~-~~~~~~~~~i-~~~~~g~~ 738 (946)
++++|++++++||+|+ ||| |+|++++++++...+.....|+... + .. .........+ .+++ +.
T Consensus 264 ~~~~D~~~~s~~K~l~-----~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~--~~ 336 (465)
T 3e9k_A 264 DWGVDFACWCSYKYLN-----AGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNP--PI 336 (465)
T ss_dssp HHTCCEEEECSSSTTC-----CCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCC--CH
T ss_pred hcCCCEEEECcccccc-----cCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCc--cH
Confidence 5789999999999983 466 4799999988776654333332110 0 00 0000000000 0011 12
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc----------CCeeeccCCCc--eeeeEEEecccccccCCC
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH----------YPILFRGVNGT--VAHEFIVDLRGLKNTAGI 806 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~----------~~v~~~~~~~~--~~~e~v~~~~~~~~~~g~ 806 (946)
..+++..+.+..+...|+.++.++...+++++.+.|++. ..+.+.++..+ ....+.+.++ .
T Consensus 337 ~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~-------~ 409 (465)
T 3e9k_A 337 LLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS-------V 409 (465)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC-------C
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec-------C
Confidence 233344556666666678888888889999999999874 22222121110 1122445443 2
Q ss_pred CHHHHHHHHHHCCcccCCCCCCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHH
Q 002263 807 EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP-TESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 807 ~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~-t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+..++.++|.++||.+. +..++++|+++ +.++|++||++++++|++++++.
T Consensus 410 ~~~~l~~~L~~~Gi~v~---~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 410 PNKDVFQELEKRGVVCD---KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp TTCCHHHHHHTTTEECE---EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHCCEEEe---cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 44679999999999874 22258999999 78899999999999999987653
No 41
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.88 E-value=2.7e-21 Score=216.20 Aligned_cols=310 Identities=12% Similarity=0.111 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHHhhCCC--cc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCC--HHHHHHcCCEEE
Q 002263 519 QEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKIV 593 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~--~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~--~~~a~~~G~~vv 593 (946)
.+...++++++++++|.+ .. .+.+++|+++.. ++++.+ .+ ++|+++...|.++ ...+...|++++
T Consensus 32 ~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~---~~~~~~------~~-d~vl~~~~~~~~~~~~~~~~~~g~~~~ 101 (353)
T 2yrr_A 32 LRVNRAIQERLAALFDPGEGALVAALAGSGSLGME---AGLANL------DR-GPVLVLVNGAFSQRVAEMAALHGLDPE 101 (353)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHH---HHHHTC------SC-CCEEEEECSHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHH---HHHHHh------cC-CcEEEEcCCCchHHHHHHHHHcCCceE
Confidence 456778999999999985 22 345566665553 333332 12 6788887665554 233577899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCccC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIG 671 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~G 671 (946)
.+++++++.+|+++|+++++++ ++++|++++| |.+|.+. ++++|.++|+++|+++++|+++. ++... ....+|
T Consensus 102 ~v~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~~li~D~a~~--~~~~~~~~~~~~ 176 (353)
T 2yrr_A 102 VLDFPPGEPVDPEAVARALKRR--RYRMVALVHGETSTGVLN-PAEAIGALAKEAGALFFLDAVTT--LGMLPFSMRAMG 176 (353)
T ss_dssp EEECCTTSCCCHHHHHHHHHHS--CCSEEEEESEETTTTEEC-CHHHHHHHHHHHTCEEEEECTTT--TTTSCCCHHHHT
T ss_pred EEeCCCCCCCCHHHHHHHHHhC--CCCEEEEEccCCCcceec-CHHHHHHHHHHcCCeEEEEcCcc--cccccccccccC
Confidence 9999888999999999999832 7888999998 4789998 79999999999999999999874 22221 123457
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCC-C-CCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP-E-KSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~-~-~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
+|++++++||+++ |++|+|++++++++.+.+.. ..+...+.... + ........+. +...+.++.+.+.
T Consensus 177 ~d~~~~s~~K~~~-----~~~g~G~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~al~ 246 (353)
T 2yrr_A 177 VDYAFTGSQKCLS-----APPGLAPIAASLEARKAFTG-KRGWYLDLARVAEHWERGGYHHTT----PVLLHYALLEALD 246 (353)
T ss_dssp CSEEECCTTSTTC-----CCSSCEEEEECHHHHHHCCC-CSCSTTCHHHHHHHHTTCCCSSCC----CHHHHHHHHHHHH
T ss_pred ceEEEecCccccc-----CCCceEEEEECHHHHHHhcc-CCCccccHHHHhhhhhcCCCCCCC----CHHHHHHHHHHHH
Confidence 8999999999884 45678999999876654431 00000000000 0 0000000011 1222233345556
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CC
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WP 828 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p 828 (946)
.+..+|+.+..++...+++++.+.|++. .+....+.....+.+.+.++ .+.+..++.++|.++||.+.... +.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi~v~~g~~~~ 320 (353)
T 2yrr_A 247 LVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPP-----EGVDADRLVRALYAEGVAVAGGIGPT 320 (353)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECC-----TTCCHHHHHHHHHHTTEECEECCGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECC-----CCCCHHHHHHHHHHCCEEEeCCcccc
Confidence 6666778888888889999999999875 33221211101112345553 24678899999999999875322 22
Q ss_pred CCCEEEEEcCCCCCHHHHH-HHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELD-RYCDALISIREE 859 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid-~~~~aL~~i~~e 859 (946)
..+.+|++++...+++|++ +++++|++++++
T Consensus 321 ~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 321 RGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp TTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 3578999998778899999 999999988654
No 42
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.87 E-value=4.7e-20 Score=208.85 Aligned_cols=305 Identities=17% Similarity=0.208 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH---HHcCCEEEE
Q 002263 519 QEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVS 594 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a---~~~G~~vv~ 594 (946)
.+...++++++++++|.+... +..++|+++...++.++..++ ..++++|+++...|.++...+ ...|++++.
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~----~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~ 118 (384)
T 1eg5_A 43 NLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETF----EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKY 118 (384)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHT----TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhc----cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEE
Confidence 355678999999999987433 455666666655544443210 024688999988776665544 678999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcC--CEEEEeccccccccccc-CCCcc
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLT-SPGYI 670 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g--~ll~vD~a~~~a~~gl~-~pg~~ 670 (946)
++.++++.+|+++|+++++ +++++|++++|+ .+|.+. ++++|.++|+++| +++++|+++. ++... ....+
T Consensus 119 v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~~~~li~Dea~~--~~~~~~~~~~~ 192 (384)
T 1eg5_A 119 VPVDSRGVVKLEELEKLVD---EDTFLVSIMAANNEVGTIQ-PVEDVTRIVKKKNKETLVHVDAVQT--IGKIPFSLEKL 192 (384)
T ss_dssp CCBCTTSCBCHHHHHHHCC---TTEEEEEEESBCTTTCBBC-CHHHHHHHHHHHCTTCEEEEECTTT--TTTSCCCCTTT
T ss_pred EccCCCCccCHHHHHHHhC---CCCeEEEEECCCCCccccc-CHHHHHHHHHhcCCceEEEEEhhhh--cCCcccCchhc
Confidence 9998889999999999996 689999999985 689998 7999999999999 9999999875 22221 12345
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEeccc--CCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL--APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l--~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
+.|++++|+||+|+ .+|+|++++++++ .+.+.+.. . .......+. +.....++.+.+
T Consensus 193 ~~di~~~s~sK~~g------~~G~G~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~------~~~~~~a~~~al 251 (384)
T 1eg5_A 193 EVDYASFSAHKFHG------PKGVGITYIRKGVPIRPLIHGGG--Q-------ERGLRSGTQ------NVPGIVGAARAM 251 (384)
T ss_dssp CCSEEEEEGGGGTS------CTTCEEEEECTTSCCCCSBCSSC--T-------TTTTBCSCC------CHHHHHHHHHHH
T ss_pred CCCEEEecHHHhcC------CCceEEEEEcCCCccccccccCc--c-------cccccCCCC------ChHHHHHHHHHH
Confidence 79999999999863 2358999998875 32222100 0 000011111 122222334444
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 826 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~- 826 (946)
..+ .+++.+..++...+++++.+.|++. +.+..+ +.+.....+.+.+. +.+..++.++|.++||.+....
T Consensus 252 ~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~v~~g~~ 323 (384)
T 1eg5_A 252 EIA-VEELSEAAKHMEKLRSKLVSGLMNLGAHIITP-LEISLPNTLSVSFP------NIRGSTLQNLLSGYGIYVSTSSA 323 (384)
T ss_dssp HHH-HHTHHHHHHHHHHHHHHHHHHHHTTTCEECSC-TTSBCTTEEEEECT------TCCHHHHHHHHHHTTEECBC---
T ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHhCCCCeEEeCC-cccCCCCEEEEEeC------CCCHHHHHHHHhhCCeEEecccc
Confidence 443 3567777788888999999999873 333211 11111122344443 3567899999999999875321
Q ss_pred C-C-------------C-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 827 W-P-------------V-----PGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 827 ~-p-------------~-----~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
| + . .+.+||++...+|++|+++++++|+++++++++
T Consensus 324 ~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 324 CTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp ---------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred ccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 1 268999998888999999999999999887765
No 43
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.87 E-value=7.4e-21 Score=216.17 Aligned_cols=315 Identities=12% Similarity=0.109 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHhhCCCcc--cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCC--HHHHHHcCCEEEE
Q 002263 519 QEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKIVS 594 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~--~~~a~~~G~~vv~ 594 (946)
.+...++++++++++|.+.. .+.+++|+++...++.++ . +++++|+++...|..+ ...+...|.+++.
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~---~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 126 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNL---L-----EPGDSFLTGTNGIWGMRAAEIADRIGARVHQ 126 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHH---C-----CTTCEEEEEESSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhc---C-----CCCCEEEEEeCCchhHHHHHHHHHcCCceEE
Confidence 35677899999999998743 355677776664444332 1 2568899885543211 3457789999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccCC
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGA 672 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~Ga 672 (946)
++.++++.+|+++|++++++ .++++|++++| |.+|.+. ++++|.++|++||+++++|+++.. ++. .....++.
T Consensus 127 ~~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~De~~~~--g~~~~~~~~~~~ 201 (393)
T 3kgw_A 127 MIKKPGEHYTLQEVEEGLAQ--HKPVLLFLVHGESSTGVVQ-PLDGFGELCHRYQCLLLVDSVASL--GGVPIYMDQQGI 201 (393)
T ss_dssp EECCTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEEC-CCTTHHHHHHHTTCEEEEECTTTT--TTSCCCTTTTTC
T ss_pred EeCCCCCCCCHHHHHHHHhh--CCCcEEEEeccCCcchhhc-cHHHHHHHHHHcCCEEEEECCccc--cCcccchhhcCC
Confidence 99988899999999999983 27889999998 5789998 799999999999999999998642 222 12245689
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC---C-------CCCCCCCCCCCCcccCccchhhHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG---G-------IPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~---d-------~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
|++++++||+|+ |++|+|++++++++.+.+......... + ++....... ...+ .+...++
T Consensus 202 d~~~~s~sK~~~-----~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~ 271 (393)
T 3kgw_A 202 DIMYSSSQKVLN-----APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRV--IHHT---TPVTSLY 271 (393)
T ss_dssp CEEEEESSSTTC-----CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCC--CCCC---CCHHHHH
T ss_pred CEEEecCccccc-----CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCC--CCCC---CCHHHHH
Confidence 999999999984 556799999987765443211000000 0 000000000 0011 0122233
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-Cc
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GF 820 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi 820 (946)
++.+.+..+..+++.+..++...+++++.+.|++. +.+..+.........+.+.++ .+.+..++.++|.++ |+
T Consensus 272 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~gi 346 (393)
T 3kgw_A 272 CLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVP-----AGYNWRDIVSYVLDHFSI 346 (393)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECC-----TTBCHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCC-----CCCCHHHHHHHHHHhCCE
Confidence 34455666667788888888889999999999886 443211100011122335543 246788999999987 99
Q ss_pred ccCCCCCC-CCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWP-VPGTLMIEP-TESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 821 ~~~~~~~p-~~~~lri~~-t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+.....+ ..+.+|+++ ....|++|+++++++|++++++++
T Consensus 347 ~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 347 EISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp ECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred EEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 87543222 357999998 656699999999999999987643
No 44
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.87 E-value=1.8e-20 Score=220.39 Aligned_cols=357 Identities=10% Similarity=0.001 Sum_probs=226.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCc---ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChh--hhhhhHHHHHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA--EIAQGRLESLL 102 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~---~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~--e~sqg~l~~l~ 102 (946)
.+| +++.++.++++++.++...+.. ...|+|.-..+...|+.+.+.+.+ .+ ++++. ..+.+..+...
T Consensus 45 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~---n~~~~~~~~~~~~~~le~ 116 (486)
T 1js3_A 45 TAP--QEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCG---AI---GCIGFSWAASPACTELET 116 (486)
T ss_dssp SCC--SSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHH---HH---CCCCSSGGGCHHHHHHHH
T ss_pred cCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeCCCCCCHHHHHHHHHHH---Hh---CcCccccccChhHHHHHH
Confidence 456 6789999999999997655542 224555432222244445433332 11 33332 23445556666
Q ss_pred HHHHHHHHHhCCCCc---------ceEEcccHHHHHHHHHHHhccc--c--C--CCC--------E--EEEcCCCCHHHH
Q 002263 103 NFQTMIADLTGLPMS---------NASLLDEGTAAAEAMAMCNNIQ--K--G--KKK--------T--FIIASNCHPQTI 157 (946)
Q Consensus 103 e~q~~la~L~g~~~~---------~~sl~~~~Ta~~ea~~la~~~~--~--~--~gd--------~--vvv~~~~Hps~~ 157 (946)
+..+++++++|++.. .+.+++|||.++..++++.+.. + + .|| + |+++...|+++.
T Consensus 117 ~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~ 196 (486)
T 1js3_A 117 VMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE 196 (486)
T ss_dssp HHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH
T ss_pred HHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHH
Confidence 777899999999863 4688999996655444443211 0 0 032 3 778999999998
Q ss_pred HHHHHhhcCCCeEEEEecc--------ccccc-cCCCE------eEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEe
Q 002263 158 DICITRADGFDIKVVVSDL--------KDIDY-KSGDV------CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMAT 221 (946)
Q Consensus 158 ~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t------~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a 221 (946)
+.++. .|++++.+++ ++|++ +++++ .+|++++| |.+|.++|+++|+++||++|++++|++
T Consensus 197 ~~~~~----~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~ 272 (486)
T 1js3_A 197 RAGLI----GGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDA 272 (486)
T ss_dssp HHHHH----HTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHh----CCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEeh
Confidence 88653 4888888776 34555 55444 47888988 679999999999999999999999954
Q ss_pred cCccccCCCCC-------CCccceEEEecc-ccccccCCCCCCceEEEEEchh--hhhcC---CCceEeEeecCCCCcce
Q 002263 222 DLLALTILKPP-------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM---PGRIVGVSIDSSGKPAL 288 (946)
Q Consensus 222 ~~~al~~l~~~-------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~--~~~~l---p~~~~G~s~d~~g~~~~ 288 (946)
.++.+.+..+ +-.++|++++++ |+++.|. ++|+++++++ +.+.+ ++.+.+...+..+...+
T Consensus 273 -a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~-----~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 346 (486)
T 1js3_A 273 -AYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNF-----DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDY 346 (486)
T ss_dssp -TTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS-----SCEEEEESCHHHHHGGGC------------CCSCCCG
T ss_pred -hhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCc-----ceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCc
Confidence 3333322211 124799999998 6665553 4789999865 34544 33333211100000000
Q ss_pred EEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEE
Q 002263 289 RVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV 368 (946)
Q Consensus 289 ~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i 368 (946)
. .. .-+..||. ...++.++ +..+|.+|++++.++..++++++.+.|+++++++++.++.++.+.|
T Consensus 347 ~-~~--~~~~~rr~----------~~~~~~~a--l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f 411 (486)
T 1js3_A 347 R-HW--QLPLGRRF----------RSLKMWFV--FRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCF 411 (486)
T ss_dssp G-GS--SSCSCCCC----------THHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEE
T ss_pred c-cc--CCCCCCch----------hHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEE
Confidence 0 00 00111221 11233333 3567889999999999999999999999983499986565667777
Q ss_pred ecCC----HHHHHHHHHHcCCee-ee--ec-CCeEEEEe-ccCCCHHHHHHHHHHHhC
Q 002263 369 KCAD----AHAIASAAYKIEMNL-RV--VD-SNTVTASF-DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 369 ~~~~----~~~v~~~L~~~GI~~-~~--~~-~~~lris~-~~~~t~edid~ll~~l~~ 417 (946)
..++ ..++.++|.++|+.+ .. +. .+.+|+++ +.++|++|++++++.|..
T Consensus 412 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 469 (486)
T 1js3_A 412 RLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRG 469 (486)
T ss_dssp EESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 7653 578999999888753 22 22 35799997 456899999999999963
No 45
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.87 E-value=2.3e-19 Score=211.76 Aligned_cols=355 Identities=12% Similarity=0.061 Sum_probs=234.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQT 106 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~ 106 (946)
+.+| ..+.+..++++.+++....+-.- .+.-..+.++..++.+.+.+.+. +... .+.+..+.+..+...++++
T Consensus 30 ~~~p--~~~~~~~~~~~~~~~~i~l~gnp-~~~l~s~~t~~~~~~v~~~l~~~---~~~~-~~~~~~~p~~~~le~~~~~ 102 (502)
T 3hbx_A 30 FKMP--ENSIPKEAAYQIINDELMLDGNP-RLNLASFVTTWMEPECDKLIMSS---INKN-YVDMDEYPVTTELQNRCVN 102 (502)
T ss_dssp SSCC--SSCCCHHHHHHHHHHHGGGSCCG-GGBTTCCSCCCCCHHHHHHHHHT---TTCB-TTCTTTCHHHHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHhccCCCC-CceeccccCCCCCHHHHHHHHHH---hccC-CCChhcChhHHHHHHHHHH
Confidence 3566 67899999999998765433211 11122334455677776565542 1111 1122334556777788999
Q ss_pred HHHHHhCCC--Ccc---eEEcccHHHHHHHHHHHhccc-----cCCCC-----EEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 107 MIADLTGLP--MSN---ASLLDEGTAAAEAMAMCNNIQ-----KGKKK-----TFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 107 ~la~L~g~~--~~~---~sl~~~~Ta~~ea~~la~~~~-----~~~gd-----~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
++++++|++ ..+ ..++.|||.++..++++.+.. +.+|+ +||++...|+++...++ ..|+++
T Consensus 103 ~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~----~~G~~~ 178 (502)
T 3hbx_A 103 MIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFAR----YFEVEL 178 (502)
T ss_dssp HHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHH----HTTCEE
T ss_pred HHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHH----HcCcee
Confidence 999999998 333 334788887666555544311 01244 89999999999888764 358888
Q ss_pred EEeccc---------cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhC------CcEEEEEecCccccC---CCC
Q 002263 172 VVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMATDLLALTI---LKP 231 (946)
Q Consensus 172 ~~~~~~---------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~------gal~~v~a~~~al~~---l~~ 231 (946)
+.++.+ +|++ +++++++|++++| |.+|.+.|+++|+++||++ |++++|++ ..+.+. +.+
T Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~-A~~~~~~p~~~~ 257 (502)
T 3hbx_A 179 KEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDA-ASGGFIAPFLYP 257 (502)
T ss_dssp EEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEEC-TTGGGTHHHHCT
T ss_pred EEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEEC-CccchhhhhhCc
Confidence 887653 3555 7889999999988 5799999999999999999 99999953 222111 111
Q ss_pred C-----CCccceEEEeccccccccCCCCCCceEEEEEchh-hh-hcCCCceEeEeecCCCCcceEEeccccccccccccc
Q 002263 232 P-----GELGADIVVGSAQRFGVPMGYGGPHAAFLATSQE-YK-RMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 304 (946)
Q Consensus 232 ~-----~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~-~~-~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~a 304 (946)
. ...|+|++++++++++ +|+++.|+++++++ .+ +.+..+ .+-.+.....+.+ .+
T Consensus 258 ~~~~~~~~~~~D~v~~s~hK~l----~~p~g~G~~~~~~~~~l~~~~~~~-----~~yl~~~~~~~~~----------~~ 318 (502)
T 3hbx_A 258 ELEWDFRLPLVKSINVSGHKYG----LVYAGIGWVIWRNKEDLPEELIFH-----INYLGADQPTFTL----------NF 318 (502)
T ss_dssp TCCCSTTSTTEEEEEEETTTTT----CCCSSCEEEEESSGGGSCGGGCEE-----ECSSSSCEEECCS----------CC
T ss_pred ccccccCCCCceEEEECccccc----CCCCCeEEEEEeCHHHhhHHhccC-----cccccCCCCCccc----------cC
Confidence 1 2358999999995553 23456788888753 32 111100 0000110000000 01
Q ss_pred CCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecCC-----HHHHHH
Q 002263 305 TSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD-----AHAIAS 378 (946)
Q Consensus 305 Tsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~~-----~~~v~~ 378 (946)
|.+. ....++.+++ ..+|.+|++++.++..+++++|++.|+++|+++++.+ +..+.+.|.+++ ..++.+
T Consensus 319 sr~~---~~~~a~~~al--~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~ 393 (502)
T 3hbx_A 319 SKGS---SQVIAQYYQL--IRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISD 393 (502)
T ss_dssp SCBS---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHH
T ss_pred CchH---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHH
Confidence 1111 1223333333 6778899999999999999999999999966999865 566777776642 469999
Q ss_pred HHHHcCCeeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 379 AAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 379 ~L~~~GI~~~~~~-------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+|.++||.++... ...+|++++..+|.+|+++|+++|..
T Consensus 394 ~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~ 439 (502)
T 3hbx_A 394 MLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEK 439 (502)
T ss_dssp HHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999999875431 24799999999999999999999974
No 46
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.87 E-value=1.7e-20 Score=214.05 Aligned_cols=314 Identities=17% Similarity=0.167 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHHhhCC-Ccc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH-H---HHHHcCCEE
Q 002263 519 QEMFNNLGEWLCTITGF-DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP-A---TAAMCGMKI 592 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~-~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~-~---~a~~~G~~v 592 (946)
.+...++++.+++++|. +.. .+..++|+++...++.+++.+.. +++++|+++...|.++. . .+...|+++
T Consensus 66 ~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~ 141 (406)
T 1kmj_A 66 TEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNV----RAGDNIIISQMEHHANIVPWQMLCARVGAEL 141 (406)
T ss_dssp HHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHC----CTTCEEEEETTCCGGGTHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcC----CCCCEEEEecccchHHHHHHHHHHHhCCCEE
Confidence 35577899999999998 433 34556666666555555432111 25688999888776543 2 256789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+.++.++++.+|+++|+++++ +++++|++++| |.+|.+. ++++|+++|+++|+++++|+++..+...+ ....++
T Consensus 142 ~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~~~~~g~~~~-~~~~~~ 216 (406)
T 1kmj_A 142 RVIPLNPDGTLQLETLPTLFD---EKTRLLAITHVSNVLGTEN-PLAEMITLAHQHGAKVLVDGAQAVMHHPV-DVQALD 216 (406)
T ss_dssp EEECBCTTSCBCGGGHHHHCC---TTEEEEEEESBCTTTCCBC-CHHHHHHHHHHTTCEEEEECTTTTTTSCC-CHHHHT
T ss_pred EEEecCCCCCcCHHHHHHHhc---cCCeEEEEeCCCccccCcC-CHHHHHHHHHHcCCEEEEEchhhcCCCCC-cccccC
Confidence 999998889999999999996 68999999998 5789998 69999999999999999999875321111 112358
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC-CC---C-C--C-CCCCCCCCcccCccchhhHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI---P-A--P-EKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~-d~---~-~--~-~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
.|+++.++||+| |++|+|++++++++.+.+.....+... +. . . + ..... ...+++ ....+++
T Consensus 217 ~d~~~~s~~K~~------g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~a 286 (406)
T 1kmj_A 217 CDFYVFSGHKLY------GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWR-FEAGTP---NTGGIIG 286 (406)
T ss_dssp CSEEEEEGGGTT------SCTTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGG-GCCSSC---CHHHHHH
T ss_pred CCEEEEEchhcc------CCCCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchh-ccCCCC---CHHHHHH
Confidence 999999999987 345689999997765544322111100 00 0 0 0 00000 001111 1111111
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccC--CCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~--~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
..+.+..+..+++.+..++...+++++.+.|++...+.+.++ .+.+ +.+.++ +.+..++.+.|.++||.
T Consensus 287 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~l~~~gi~ 357 (406)
T 1kmj_A 287 LGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGV---IAFNLG------KHHAYDVGSFLDNYGIA 357 (406)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSE---EEEEET------TCCHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCE---EEEEEC------CCCHHHHHHHHhhCCcE
Confidence 223455555557777777778899999999987523322222 2222 344443 35678899999999998
Q ss_pred cCCCC---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 822 ~~~~~---------~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+.... +..++.+||+++..+|++|+++++++|+++++.+
T Consensus 358 v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 358 VRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp CEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 64211 1124899999999899999999999999987754
No 47
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.87 E-value=1.6e-20 Score=213.66 Aligned_cols=317 Identities=12% Similarity=0.045 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcCCEEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKIVS 594 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G~~vv~ 594 (946)
..+.+.++++++++++|.+.. .+.+++|+++...++ +.+. .++++|+++...|.++. ..+...|++++.
T Consensus 40 ~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~---~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~ 111 (392)
T 2z9v_A 40 FQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAA---ASLI-----SPDDVVLNLASGVYGKGFGYWAKRYSPHLLE 111 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHH---HHHC-----CTTCCEEEEESSHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHH---HHhc-----CCCCEEEEecCCcccHHHHHHHHHcCCceEE
Confidence 345677899999999998743 345566666654443 3321 24578999887665543 224557999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCccCC
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGA 672 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~Ga 672 (946)
+++++++.+|+++|++++++. +++++|++++| |.+|.+. ++++|+++|+++|+++++|+++.. +... ....+|+
T Consensus 112 v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~a~~~--g~~~~~~~~~~~ 187 (392)
T 2z9v_A 112 IEVPYNEAIDPQAVADMLKAH-PEITVVSVCHHDTPSGTIN-PIDAIGALVSAHGAYLIVDAVSSF--GGMKTHPEDCKA 187 (392)
T ss_dssp EECCTTSCCCHHHHHHHHHHC-TTCCEEEEESEEGGGTEEC-CHHHHHHHHHHTTCEEEEECTTTB--TTBSCCGGGGTC
T ss_pred eeCCCCCCCCHHHHHHHHhcC-CCCcEEEEeccCCCCceec-cHHHHHHHHHHcCCeEEEEccccc--CCcccccccccc
Confidence 999888899999999999642 57889999998 4689998 799999999999999999998753 2221 1234689
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCC------CC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL------PS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~l------p~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
|++++++||+|+ |++|+|++++++++.+.+ ++ ...+....+... ..... ...+. +...++++.
T Consensus 188 d~~~~s~sK~~~-----~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~-~~~~~-~~~~~---~~~~~~a~~ 257 (392)
T 2z9v_A 188 DIYVTGPNKCLG-----APPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAW-SRDKP-FPFTP---SVSEINGLD 257 (392)
T ss_dssp SEEEECSSSTTC-----CCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTT-STTSC-CSSCC---CHHHHHHHH
T ss_pred eEEEecCccccc-----CCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhh-cccCC-CCCCC---CHHHHHHHH
Confidence 999999999883 557889999987654433 21 111100000000 00000 01110 122222334
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-CcccC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHGP 823 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi~~~ 823 (946)
+.+..+...|+.+..++...+++++.+.|++. +.+..+.......+.+.+.++ .+.+..++.++|.++ ||.+.
T Consensus 258 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L~~~~gi~v~ 332 (392)
T 2z9v_A 258 VALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTP-----DGVDEKALRQAARARYGVVFS 332 (392)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECC-----TTCCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECC-----CCCCHHHHHHHHHhcCCEEEe
Confidence 45566666677788888888999999999875 333210100011222445553 246788999999987 99864
Q ss_pred CCC-CCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHH
Q 002263 824 TMS-WPVPGTLMIEPTE-SESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 824 ~~~-~p~~~~lri~~t~-~~t~~eid~~~~aL~~i~~e~~ 861 (946)
... +...+.+|+++.. .+|++|+++++++|++++++++
T Consensus 333 ~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 333 SGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp ECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 322 1235889999644 7899999999999999887643
No 48
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.87 E-value=2.5e-20 Score=213.96 Aligned_cols=317 Identities=15% Similarity=0.116 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHHhhCC-Ccc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCC----HHHHHHcCCEEE
Q 002263 520 EMFNNLGEWLCTITGF-DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN----PATAAMCGMKIV 593 (946)
Q Consensus 520 ~~~~el~~~la~l~G~-~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~----~~~a~~~G~~vv 593 (946)
+.+.++++.+++++|. +.. .+.+++|+++...++.+++... ..++++|+++...|.++ ...+...|++++
T Consensus 72 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~ 147 (420)
T 1t3i_A 72 DAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNN----LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLK 147 (420)
T ss_dssp HHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHH----CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcc----cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEE
Confidence 4567899999999998 432 3555667766655555442110 12568899998888764 344667899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCccC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIG 671 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~G 671 (946)
.+++++++.+|+++|+++++ +++++|++++|+ .+|.+. ++++|+++|+++|+++++|+++... ... ....+|
T Consensus 148 ~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~a~~~~--~~~~~~~~~~ 221 (420)
T 1t3i_A 148 FVQLDEQESFDLEHFKTLLS---EKTKLVTVVHISNTLGCVN-PAEEIAQLAHQAGAKVLVDACQSAP--HYPLDVQLID 221 (420)
T ss_dssp EECBCTTSSBCHHHHHHHCC---TTEEEEEEESBCTTTCBBC-CHHHHHHHHHHTTCEEEEECTTTTT--TSCCCHHHHT
T ss_pred EeccCCCCCcCHHHHHHhhC---CCceEEEEeCCcccccCcC-CHHHHHHHHHHcCCEEEEEhhhccC--CccCchhhcC
Confidence 99998888999999999996 689999999994 689998 7999999999999999999987532 221 223468
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC-CC-CC----C-CCCCCCCCcccCccchhhHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI-PA----P-EKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~-d~-~~----~-~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
.|++++|+||.+ |++|+|++++++++.+.+.....+... +. .. + ..... ...+++ ....+++.
T Consensus 222 ~di~~~s~sK~~------~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~a~ 291 (420)
T 1t3i_A 222 CDWLVASGHKMC------APTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHK-FEAGTP---AIAEAIAL 291 (420)
T ss_dssp CSEEEEEGGGTT------SCTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGG-GCCSSC---CHHHHHHH
T ss_pred CCEEEEehhhhc------CCCceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhh-ccCCCc---cHHHHHHH
Confidence 999999999965 345689999987765544321111000 00 00 0 00000 001111 11111122
Q ss_pred HHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC---ceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 745 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG---TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 745 ~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~---~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
.+.+..+...|+.+..++...+++++.+.|++...+.+..+.. ...+-+.+.++ +.+..++.+.|.++||.
T Consensus 292 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~ 365 (420)
T 1t3i_A 292 GAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVA------GLHASDVATMVDQDGIA 365 (420)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEET------TBCHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEEC------CCCHHHHHHHHHHCCeE
Confidence 2245555555777777888889999999998752332212110 01122444543 24678899999999998
Q ss_pred cCCCC-C--------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMS-W--------PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 822 ~~~~~-~--------p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.... + ...+.+||+++..++++|+++++++|+++++++++
T Consensus 366 v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 366 IRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred EeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 75331 1 11578999999888999999999999999876543
No 49
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.87 E-value=5.6e-21 Score=222.94 Aligned_cols=340 Identities=12% Similarity=0.115 Sum_probs=228.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCC-cceeecCCCCCCCCCcHHHHHHHHh---C-----CccccccCCChhhhhhhHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNK-VYKSFIGMGYYNTHVPPVILRNIME---N-----PAWYTQYTPYQAEIAQGRL 98 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~-~~~~~~G~g~~~~~~p~~i~~~i~~---~-----~~~~t~~~pyq~e~sqg~l 98 (946)
.|| .+++++.++.+.+.++...+. .|.++.+.|.++..+-..+...... + .+|++ +.| ....+.+..
T Consensus 57 ~lp--~~g~~~~~i~~~~~~~~~~~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 132 (456)
T 2z67_A 57 KIP--ENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVD-PQP-KASGASIMY 132 (456)
T ss_dssp SCC--SSCCCHHHHHHHHHHHHTTBGGGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTS-CCT-TBHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHhccccccccccccccccccccccccCccccccCCCccHHHHHHh-hCc-ccccCcHHH
Confidence 566 579999999999988876554 4666666775554332222211100 0 01111 122 112344577
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHH-HHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGT-AAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~T-a~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~- 176 (946)
+...++++++++++|++.. +.+++|+| ++..+++++++..+ ++++||++..+|+++...++. .|++++.++.
T Consensus 133 ~~~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~-~~~~vi~~~~~h~s~~~~~~~----~G~~~~~v~~~ 206 (456)
T 2z67_A 133 ALTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKY-GSNVVIYPYASHKSPIKAVSF----VGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH----TTCEEEEECCE
T ss_pred HHHHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhc-CCCEEEEECCCcHHHHHHHHH----cCCCceEEEEe
Confidence 8888999999999999876 88889999 44443444433111 467899899999998777643 5888877653
Q ss_pred ----------ccccc-c-C----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEe-cC-ccccCCC-CCCCc-
Q 002263 177 ----------KDIDY-K-S----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMAT-DL-LALTILK-PPGEL- 235 (946)
Q Consensus 177 ----------~~l~~-i-~----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a-~~-~al~~l~-~~~~~- 235 (946)
++|++ + + +++++|++++| |.+|.+.|+++|+++||++|++++||. .. .+.+..+ ....+
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~ 286 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFK 286 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHT
T ss_pred ccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhC
Confidence 34555 6 4 47788888999 679999999999999999999999953 11 1222211 11123
Q ss_pred -cceEEEecc-ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 236 -GADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 236 -GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
++|++++|+ |++++| .++|+++++ +++++.+.+...| +.+ + .
T Consensus 287 ~~~D~~~~s~hK~~~~p-----~g~G~l~~~~~~~~~~l~~~~~g---------------------------~~~-~--~ 331 (456)
T 2z67_A 287 YRVDAVVSSSDKNLLTP-----IGGGLVYSTDAEFIKEISLSYPG---------------------------RAS-A--T 331 (456)
T ss_dssp SCCSEEEEEHHHHHCCC-----SSCEEEEESCHHHHHHHHTTSCS---------------------------CBC-S--H
T ss_pred CCCCEEEEcCCCCcCCC-----CCeEEEEEcCHHHHhhcCcCCCC---------------------------CCC-C--C
Confidence 899999999 555444 357999995 5666655221111 000 0 1
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCCCcCeEEEec--CC-HHHHHHHHHHcCC
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFFDTVKVKC--AD-AHAIASAAYKIEM 385 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~~~~~i~~--~~-~~~v~~~L~~~GI 385 (946)
...+..+++ ..++.+|++++.++..+++++|+++|+++ | +.++... +.+.|.+ ++ ..++.++|.++||
T Consensus 332 ~~~~~~aal--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~v~~~~--~~v~~~~~~~~~~~~l~~~L~~~gi 406 (456)
T 2z67_A 332 PVVNTLVSL--LSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTG-GKFLDVE--SPIASCISVNSDPVEIAAKLYNLRV 406 (456)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CCBCCCC--CSSEEEEECSSCHHHHHHHHHHTTE
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC-CEecCCC--CeEEEEEecccHHHHHHHHHHHcCC
Confidence 123344443 56678899999999999999999999987 6 7666433 4444544 55 5789999999986
Q ss_pred e-eeee--------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 386 N-LRVV--------------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 386 ~-~~~~--------------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. ++.. ..+.+|+|++.++|++|+++++++|+.
T Consensus 407 ~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~ 453 (456)
T 2z67_A 407 TGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEK 453 (456)
T ss_dssp ESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred CcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHH
Confidence 2 2222 247899999999999999999999974
No 50
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.87 E-value=1.1e-19 Score=209.27 Aligned_cols=310 Identities=12% Similarity=0.112 Sum_probs=210.0
Q ss_pred cHHHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH---HHcCCEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKI 592 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a---~~~G~~v 592 (946)
+..+...++++++++++|.+.. .+.+++|+++...++.++..+.. +++++|+++...|+++...+ ...|+++
T Consensus 65 ~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~ 140 (423)
T 3lvm_A 65 QAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEV 140 (423)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHT----TTCCEEEEETTSCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhc----cCCCEEEECCccchHHHHHHHHHHHcCCEE
Confidence 4456778899999999999853 35566777776655555443221 14689999988877766655 4459999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCcc
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYI 670 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~ 670 (946)
+.+++++++.+|+++|+++++ +++++|++++|+ .+|.+. ++++|+++|+++|+++++|+++.. +.+ .....+
T Consensus 141 ~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~Dea~~~--~~~~~~~~~~ 214 (423)
T 3lvm_A 141 TYLAPQRNGIIDLKELEAAMR---DDTILVSIMHVNNEIGVVQ-DIAAIGEMCRARGIIYHVDATQSV--GKLPIDLSQL 214 (423)
T ss_dssp EEECCCTTSCCCHHHHHHHCC---TTEEEEECCSBCTTTCBBC-CHHHHHHHHHHHTCEEEEECTTTT--TTSCCCTTTS
T ss_pred EEeccCCCCccCHHHHHHhcC---CCcEEEEEeCCCCCCcccc-CHHHHHHHHHHcCCEEEEEhhhhc--CCCCcChhhc
Confidence 999999899999999999996 789999999884 789998 799999999999999999998643 222 123456
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
++|++++++||+| |++|+|++++++++...+.....+... .......+. +...+..+.+.+..
T Consensus 215 ~~di~~~s~sK~~------g~~g~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~a~~~al~~ 277 (423)
T 3lvm_A 215 KVDLMSFSGHKIY------GPKGIGALYVRRKPRVRIEAQMHGGGH-------ERGMRSGTL----PVHQIVGMGEAYRI 277 (423)
T ss_dssp CCSEEEEESTTTT------SCSSCEEEEECBTTBCCCCCSSCSSCT-------TTTTCCSCC----CHHHHHHHHHHHHH
T ss_pred CCCEEEechHHhc------CCCCeEEEEEeccccCCCCccccCCcc-------cccccCCCC----CHHHHHHHHHHHHH
Confidence 8999999999965 445689999997766555322111100 000000010 11112222233343
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-C-
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W- 827 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~- 827 (946)
+.. .+.+..++...+++++.+.|++...+...++.+ ...+.+.+.+. +.+..++.+.|.+ +.+.... +
T Consensus 278 ~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~l~~--i~v~~g~~~~ 348 (423)
T 3lvm_A 278 AKE-EMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN------YVEGESLIMALKD--LAVSSGSACT 348 (423)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEET------TSCHHHHHHHTTT--EECBCCCC--
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeC------CCCHHHHHHHHhh--heeccCcccc
Confidence 333 366777778888999999997753332222111 11122334433 4578889998877 5443211 1
Q ss_pred C-------------C-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 828 P-------------V-----PGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 828 p-------------~-----~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+ + .+.+|+++...+|++|+++++++|+++++++++
T Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 349 SASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp ---CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 1 1 378999999889999999999999999998876
No 51
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.87 E-value=2e-20 Score=210.24 Aligned_cols=314 Identities=11% Similarity=0.078 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHhhCCCc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCC-CHHHHHHcCCEEEEE
Q 002263 521 MFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGT-NPATAAMCGMKIVSV 595 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~-~~~~a~~~G~~vv~v 595 (946)
...++++++++++|.+. ..+..++|+++...++.++. .++++|+++ ...|++ ....+...|++++.+
T Consensus 38 ~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v 109 (366)
T 1m32_A 38 VVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSAL--------GPQDKVLIVSNGAYGARMVEMAGLMGIAHHAY 109 (366)
T ss_dssp THHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSC--------CTTCCEEEEESSHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhc--------CCCCeEEEEeCCCccHHHHHHHHHhCCceEEE
Confidence 35678899999999432 23556677766644433321 134666655 466664 334567789999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
++++++.+|+++|+++++++ .++++|++++| |.+|.+. ++++|+++|+++|+++++|+++......+ ....++.|+
T Consensus 110 ~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~Dea~~~~~~~~-~~~~~~~di 186 (366)
T 1m32_A 110 DCGEVARPDVQAIDAILNAD-PTISHIAMVHSETTTGMLN-PIDEVGALAHRYGKTYIVDAMSSFGGIPM-DIAALHIDY 186 (366)
T ss_dssp ECCTTSCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEEC-CHHHHHHHHHHHTCEEEEECTTTTTTSCC-CTTTTTCSE
T ss_pred eCCCCCCCCHHHHHHHHhcC-CCeEEEEEecccCCcceec-CHHHHHHHHHHcCCEEEEECCccccCcCc-cccccCccE
Confidence 99888899999999999852 35788888888 5689998 69999999999999999999875322111 123467999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCC-C-C--CCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA-P-E--KSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~-~-~--~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
++.++||+|+ |++|+|++++++++.+.+.........+... + + ........+. +...+.++.+.+..
T Consensus 187 ~~~s~~K~~~-----~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~al~~ 257 (366)
T 1m32_A 187 LISSANKCIQ-----GVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTS----PTHTVLAFAQALKE 257 (366)
T ss_dssp EEEESSSTTC-----CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCC----CHHHHHHHHHHHHH
T ss_pred EEecCccccc-----CCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCC----CHHHHHHHHHHHHH
Confidence 9999999984 4457899999987766553211000000000 0 0 0000000111 22223334455555
Q ss_pred HcHhh-HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC
Q 002263 751 MGSKG-LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP 828 (946)
Q Consensus 751 lG~eG-l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p 828 (946)
+...| +.+..++...+++++.+.|++. +.+..+. .......+.++++. ..+.+..++.++|.++||.+......
T Consensus 258 ~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~gi~v~~~~~~ 333 (366)
T 1m32_A 258 LAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDD-ELHSPIITAFYSPE---DPQYRFSEFYRRLKEQGFVIYPGKVS 333 (366)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCG-GGBCSSEEEEECCC---CTTCCHHHHHHHHHHTTEECEECCCS
T ss_pred HHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCc-hhcCceEEEEEcCc---cCCCCHHHHHHHHHHCCEEEECCcCC
Confidence 65666 7777788888999999999875 3332110 00111124566541 01457889999999999987432212
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
..+.+|++++..++++|+++++++|+++++
T Consensus 334 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 334 QSDCFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp SSCEEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 357899999998899999999999988754
No 52
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.87 E-value=7.5e-20 Score=207.15 Aligned_cols=308 Identities=13% Similarity=0.141 Sum_probs=208.6
Q ss_pred cHHHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH---HcCCEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA---MCGMKI 592 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~---~~G~~v 592 (946)
+..+.+.++++++++++|.+.. .+.+++|+++...++.++..+... ++++|+++...|.++...+. ..|+++
T Consensus 40 ~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~----~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4eb5_A 40 KAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNAR----KGKHILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGG----GCCEEEEETTCCHHHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccC----CCCEEEECCCcchHHHHHHHHHHhCCcEE
Confidence 3456788999999999998743 355567777765555554422112 35789999887776655544 369999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCcc
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 670 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~ 670 (946)
+.+++++++.+|+++|+++++ +++++|++++|+ .+|.+. ++++|.++|+++|++ ++|+++.. +... ....+
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~-i~D~a~~~--g~~~~~~~~~ 188 (382)
T 4eb5_A 116 EYIPVGKYGEVDVSFIDQKLR---DDTILVSVQHANNEIGTIQ-PVEEISEVLAGKAAL-HIDATASV--GQIEVDVEKI 188 (382)
T ss_dssp EEECBCTTSCBCHHHHHHHCC---TTEEEEECCSBCTTTCBBC-CHHHHHHHHTTSSEE-EEECTTTB--TTBCCCHHHH
T ss_pred EEeccCCCCccCHHHHHHHhc---CCCeEEEEeccCCCccccC-CHHHHHHHHHHCCCE-EEEcchhc--CCcccCcccc
Confidence 999998889999999999996 689999999984 689998 799999999999999 99998753 2211 11235
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEeccc--CCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL--APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l--~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
+.|++++|+||+++ .+|+|+++++++. .+.+.+ ... ......++. +...+..+.+.+
T Consensus 189 ~~di~~~s~sK~~g------~~g~G~~~~~~~~~l~~~~~~----~~~---~~~~~~~~~--------~~~~~~~~~~al 247 (382)
T 4eb5_A 189 GADMLTISSNDIYG------PKGVGALWIRKEAKLQPVILG----GGQ---ENGLRSGSE--------NVPSIVGFGKAA 247 (382)
T ss_dssp TCSEEEEETGGGTC------CSSCEEEEEETTCCCCCSSCS----SCT---GGGTSCSCC--------CHHHHHHHHHHH
T ss_pred CCCEEEeehHHhcC------CCceEEEEEccccccCceecC----CCc---cccccCCCc--------cHHHHHHHHHHH
Confidence 79999999999753 2368899888763 211111 000 000000111 111112223333
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 826 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~- 826 (946)
..+ .+++.+..++...+++++.+.|++...+.+.++.+ ...+.+.+.++ +.+..++.++|.++||.+....
T Consensus 248 ~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~v~~g~~ 320 (382)
T 4eb5_A 248 EIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS------YIEGESIVLSLDMAGIQASTGSA 320 (382)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET------TSCHHHHHHHHHHHTCBCBCCCG
T ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC------CcCHHHHHHHHHHCCEEEecccc
Confidence 333 34677777888889999999998742332222211 11222445543 3578899999999999875322
Q ss_pred --------------CC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 002263 827 --------------WP-----VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 863 (946)
Q Consensus 827 --------------~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~ 863 (946)
++ ..+.+|+++...+|++|+++++++|++++++++++
T Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4eb5_A 321 CSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp GGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 11 14789999998889999999999999999888763
No 53
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.87 E-value=3.2e-20 Score=211.36 Aligned_cols=313 Identities=15% Similarity=0.128 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHhhCCCcc--cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH--HHHHcCCEEEE
Q 002263 519 QEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--TAAMCGMKIVS 594 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~--~a~~~G~~vv~ 594 (946)
.+...++++++++++|.+.. .+.+++|+++...++. .+. .++++|+++...|.++.. .+...|++++.
T Consensus 51 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~---~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 122 (393)
T 2huf_A 51 LKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLC---NLL-----EDGDVILIGHTGHWGDRSADMATRYGADVRV 122 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHH---HHC-----CTTCEEEEEESSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHH---HHh-----CCCCEEEEECCCcchHHHHHHHHHcCCeeEE
Confidence 35677899999999998753 3456677766644433 321 246789998876655321 24568999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCC-CeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC
Q 002263 595 VGTDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 672 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~-~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga 672 (946)
+++++++.+|+++|+++++ + ++++|++++| |.+|.+. ++++|+++|+++|+++++|+++..+...+ ....++.
T Consensus 123 v~~~~~~~~d~~~l~~~i~---~~~~~~v~~~~~~nptG~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~ 197 (393)
T 2huf_A 123 VKSKVGQSLSLDEIRDALL---IHKPSVLFLTQGDSSTGVLQ-GLEGVGALCHQHNCLLIVDTVASLGGAPM-FMDRWEI 197 (393)
T ss_dssp EECCTTCCCCHHHHHHHHH---HHCCSEEEEESEETTTTEEC-CCTTHHHHHHHTTCEEEEECTTTBTTBCC-CTTTTTC
T ss_pred EeCCCCCCCCHHHHHHHHh---ccCCcEEEEEccCCCccccC-CHHHHHHHHHHcCCEEEEEcccccCCCCc-chhhcCc
Confidence 9998888999999999997 4 7889999998 5789998 69999999999999999999864322111 1234689
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCC-------ccccC--CC-CCCCCCCCCCCCcccCccchhhHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH-------PVVST--GG-IPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~-------~v~~~--~d-~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
|+++.++||+|+ |++|+|++++++++.+.+... ..+.. .+ ++.. .... ....+. +....+
T Consensus 198 d~~~~s~sK~l~-----g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~---~~~~~~ 267 (393)
T 2huf_A 198 DAMYTGSQKVLG-----APPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCF-GRPR-IYHHTI---SSTLLY 267 (393)
T ss_dssp SEEECCSSSTTC-----CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCS-SSCC-CCSCCC---CHHHHH
T ss_pred cEEEECCCcccc-----cCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccc-cccC-CCCCCC---CHHHHH
Confidence 999999999983 456779999987654432110 00000 00 0000 0000 001111 111222
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHC-C
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-G 819 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-G 819 (946)
++.+.+..+..+|+.+..++...+++++.+.|++. +.+. .+.+ ...+-+.+.++ .+.+..++.++|.++ |
T Consensus 268 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~~g 340 (393)
T 2huf_A 268 GLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELY--ADPKDRLSTVTTIKVP-----QGVDWLKAAQYAMKTYL 340 (393)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBS--SCGGGBCTTEEEEECC-----TTCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeec--cCccccCCcEEEEEcC-----CCCCHHHHHHHHHHhCC
Confidence 23334555555577777788888999999999875 3332 1111 01112445553 246788999999864 9
Q ss_pred cccCCCCCC-CCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTMSWP-VPGTLMIEP-TESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 820 i~~~~~~~p-~~~~lri~~-t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
|.+.....+ ..+.+||++ ....+++++++++++|++++++++
T Consensus 341 i~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 341 VEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp EECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 987533211 357899999 445679999999999999987754
No 54
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.86 E-value=1e-20 Score=214.88 Aligned_cols=317 Identities=11% Similarity=0.046 Sum_probs=208.4
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCcccccc--CCCh----hhhhhhHHHHHHHHHHHHHHHhCCCC-cceEE-cccHHHHH
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQ----AEIAQGRLESLLNFQTMIADLTGLPM-SNASL-LDEGTAAA 129 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~--~pyq----~e~sqg~l~~l~e~q~~la~L~g~~~-~~~sl-~~~~Ta~~ 129 (946)
+...| |+.+|+.|.+.+.. +++.| +|.. ...++...+.+.++++.+++|+|++. .++.+ +.++|.++
T Consensus 30 l~~ag--pt~~p~~V~~a~~~---~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~ 104 (386)
T 3qm2_A 30 NFSSG--PAMLPAEVLKLAQQ---ELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQF 104 (386)
T ss_dssp ECCSS--SCCCCHHHHHHHTC---C-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHH
T ss_pred cccCC--CCCCCHHHHHHHHH---HHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHH
Confidence 45667 55699998877663 23222 1211 11244556889999999999999965 36777 47999888
Q ss_pred HHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-----------cccc-cCCCEeEEEEEcC-CC
Q 002263 130 EAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-----------DIDY-KSGDVCGVLVQYP-GT 196 (946)
Q Consensus 130 ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-----------~l~~-i~~~t~~v~v~~p-n~ 196 (946)
++++..+ +. ++|++++....|.+. .|...++..| ++++++.+ +++. ++++|++|++++. |.
T Consensus 105 n~ai~~l-~~--~gd~v~~~~~~~~~~--~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~ 178 (386)
T 3qm2_A 105 AGVPLNL-LG--DKTTADYVDAGYWAA--SAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETI 178 (386)
T ss_dssp HHHHHHH-CT--TCCEEEEEESSHHHH--HHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETT
T ss_pred HHHHHhc-cC--CCCeEEEEeCCHHHH--HHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCC
Confidence 7776654 23 789987666655554 3444567778 77776543 3444 7789999988764 78
Q ss_pred ceee-cchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCc
Q 002263 197 EGEV-LDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGR 274 (946)
Q Consensus 197 ~G~i-~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~ 274 (946)
+|++ +|+++|+ +|++++||+ ..++|.++ +..+||+ +++|+||+.+| ||+|++++++++++++++.
T Consensus 179 tG~~i~pi~~i~-----~g~~~~vDa-~qs~g~~pidv~~~~~--~~~s~hK~lGP-----~G~g~l~v~~~~~~~~~~~ 245 (386)
T 3qm2_A 179 DGIAIDETPDFG-----PEVVVTADF-SSTILSAPLDVSRYGV--IYAGAQKNIGP-----AGLTLVIVREDLLGKAHES 245 (386)
T ss_dssp TTEECCCCCCCC-----TTCCEEEEC-TTTTTSSCCCGGGCSE--EEEETTTTTCC-----TTEEEEEEEGGGCSCCCTT
T ss_pred cCEecCchhhhc-----CCCEEEEEc-ccccCCCCCCccccCE--EEEecccccCC-----CccEEEEECHHHHhhhccc
Confidence 9996 9999986 799999954 34666543 4567764 56888555234 5799999999998777542
Q ss_pred eEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCC
Q 002263 275 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLG 353 (946)
Q Consensus 275 ~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g 353 (946)
. +.+ +.+... +...+..+|+|+ .+++++.+++ .++..+ |++++.++..+++++|+++|+++|
T Consensus 246 ~----------p~~-~~~~~~-~~~~~~~gTp~v---~~i~~l~~Al--~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~ 308 (386)
T 3qm2_A 246 C----------PSI-LDYTVL-NDNDSMFNTPPT---FAWYLSGLVF--KWLKAQGGVAAMHKINQQKAELLYGVIDNSD 308 (386)
T ss_dssp S----------CGG-GCHHHH-HHC-------CC---SHHHHHHHHH--HHHHHHTHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred C----------CcH-HHHHHH-hhcCCCCCCCcH---HHHHHHHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 1 111 111111 111122479998 4666777776 666667 899999999999999999999987
Q ss_pred CE-EEc-CC-CCc-CeEEEecCC---HHHHHHHHHHcCCeeeee--cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 354 TV-EVQ-GL-PFF-DTVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 354 ~~-~~~-~~-~~~-~~~~i~~~~---~~~v~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+ ... .. ... ..++|++++ ..++.+.|.++||.++.- ..+.+|+|+..+||++|||+|+++|+
T Consensus 309 -~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~ 379 (386)
T 3qm2_A 309 -FYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMI 379 (386)
T ss_dssp -SEECCBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred -CcccCCCHHHcCceEEEEECCCccccHHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHH
Confidence 5 433 21 222 356777763 457778899999987532 12679999999999999999999986
No 55
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.86 E-value=1.8e-19 Score=204.09 Aligned_cols=291 Identities=16% Similarity=0.135 Sum_probs=208.7
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 94 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 94 sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
+.+..+.+.++++.+++++|.++.++.+++|+|.+++.++.++. ...++||+|+++...|+++...++.. +..|++++
T Consensus 38 ~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~ 116 (382)
T 4eb5_A 38 GFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFL-QKQGFEVE 116 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHH-TTTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHH-HhCCcEEE
Confidence 45667788899999999999987788899999998888776653 00027899999999999998887643 34788988
Q ss_pred Eecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEE
Q 002263 173 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 241 (946)
Q Consensus 173 ~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v 241 (946)
.+++ ++|++ +++++++|++++| |.+|.+.|+++|.++|+++|++ ++|. ..+++... +..++++|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~-a~~~g~~~~~~~~~~~di~~ 194 (382)
T 4eb5_A 117 YIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDA-TASVGQIEVDVEKIGADMLT 194 (382)
T ss_dssp EECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEEC-TTTBTTBCCCHHHHTCSEEE
T ss_pred EeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEc-chhcCCcccCccccCCCEEE
Confidence 8765 34555 7778999988888 6799999999999999999999 8843 44444332 22346899999
Q ss_pred eccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 242 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 242 ~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
+|.+|+.+| +|.|+++++++. .+...+.| +. +..++..+|.|.. ...++.+++
T Consensus 195 ~s~sK~~g~-----~g~G~~~~~~~~--~l~~~~~~------~~-----------~~~~~~~~~~~~~---~~~~~~~al 247 (382)
T 4eb5_A 195 ISSNDIYGP-----KGVGALWIRKEA--KLQPVILG------GG-----------QENGLRSGSENVP---SIVGFGKAA 247 (382)
T ss_dssp EETGGGTCC-----SSCEEEEEETTC--CCCCSSCS------SC-----------TGGGTSCSCCCHH---HHHHHHHHH
T ss_pred eehHHhcCC-----CceEEEEEcccc--ccCceecC------CC-----------ccccccCCCccHH---HHHHHHHHH
Confidence 998334322 357899988763 12111111 00 1112334565552 333444443
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---CcCeEEEecCC--HHHHHHHHHHcCCeeeee------
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVV------ 390 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~------ 390 (946)
.++ .++++++.++..++++++.+.|+++.++++.... ....+.+.+++ ..++.+.|.++||.++..
T Consensus 248 --~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~ 324 (382)
T 4eb5_A 248 --EIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSK 324 (382)
T ss_dssp --HHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTSCHHHHHHHHHHHTCBCBCCCGGGTS
T ss_pred --HHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCcCHHHHHHHHHHCCEEEeccccccCC
Confidence 222 3478899999999999999999998338887532 12345566554 788999999999987542
Q ss_pred -----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -----------------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -----------------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+|++++..+|++|+++++++|..
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (382)
T 4eb5_A 325 TLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG 368 (382)
T ss_dssp SCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 146899999999999999999999974
No 56
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.86 E-value=5.2e-20 Score=209.78 Aligned_cols=312 Identities=13% Similarity=0.103 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHhhCCCcc--cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcCCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G~~vv~v 595 (946)
....++++.+++++|.+.. .+..++|+++...++ +.+. .++++|+++...|..+. ..+...|++++.+
T Consensus 51 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~---~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 51 RTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAML---SNLL-----EEGDRVLIAVNGIWAERAVEMSERYGADVRTI 122 (396)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHH---HHHC-----CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHH---HHhc-----CCCCeEEEEcCCcccHHHHHHHHHcCCceEEe
Confidence 3467899999999998764 345566666654443 3321 24678999988777664 3567899999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCccCCC
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGAD 673 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~GaD 673 (946)
+.++++.+|+++|+++++++ ++++|++++| |.+|.+. ++++|+++|+++|+++++|+++.. +... ....+|+|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~~li~Dea~~~--g~~~~~~~~~~~d 197 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELH--QPKCLFLTHGDSSSGLLQ-PLEGVGQICHQHDCLLIVDAVASL--CGVPFYMDKWEID 197 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHH--CCSEEEEESEETTTTEEC-CCTTHHHHHHHTTCEEEEECTTTB--TTBCCCTTTTTCC
T ss_pred cCCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCceec-CHHHHHHHHHHcCCEEEEEccccc--cCCccchhhcCcC
Confidence 99888899999999999731 6889999999 6789998 699999999999999999998752 2221 22456889
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC------C-ccccCC---CCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS------H-PVVSTG---GIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~------~-~v~~~~---d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
+++.++||+|+ |++|+|++++++++...+.. . ..+.+. .++. ...... ...+. +.....+
T Consensus 198 ~~~~s~~K~~~-----~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~---~~~~~~a 267 (396)
T 2ch1_A 198 AVYTGAQKVLG-----APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGC-YDEPKR-YHHTV---ASNLIFA 267 (396)
T ss_dssp EEECCCC-CCC-----CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTC-SSSCCC-CCCCC---CHHHHHH
T ss_pred EEEEcCCcccc-----CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhh-hcccCC-CCCCC---cHHHHHH
Confidence 99999999984 45788999998765433210 0 000000 0000 000000 00110 1222233
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCC-c-eeeeEEEecccccccCCCCHHHHHHHHHHC-C
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNG-T-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-G 819 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~-~-~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-G 819 (946)
+.+.+..+..+++.+..++...+++++.+.|++. +.+. .+.+ . ..+.+.+.++ .+.+..++.++|.++ |
T Consensus 268 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~~g 340 (396)
T 2ch1_A 268 LREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIF--VKDPRHRLPTVTGIMIP-----KGVDWWKVSQYAMNNFS 340 (396)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBS--SCSGGGBCTTEEEEECC-----TTCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeec--cCCccccCCceEEEEcC-----CCCCHHHHHHHHHHhCC
Confidence 4455666666778888888889999999999875 4432 1111 1 1112445543 256789999999875 9
Q ss_pred cccCCCCCC-CCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTMSWP-VPGTLMIEP-TESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 820 i~~~~~~~p-~~~~lri~~-t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
|.+.....+ ..+.+||++ ....+++|+++++++|++++++.+
T Consensus 341 i~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 341 LEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp BCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 987532212 357899999 456789999999999999987653
No 57
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.86 E-value=4.7e-20 Score=208.83 Aligned_cols=321 Identities=13% Similarity=0.087 Sum_probs=224.6
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCC--cceEEcccHHHHHHHHHHHh
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~--~~~sl~~~~Ta~~ea~~la~ 136 (946)
++.| |..+|+.+.+.+.+. ...+ + +....+...++++.+++++|.+. .++.+++|+|.+++ ++.++
T Consensus 6 ~~~g--p~~~~~~v~~a~~~~---~~~~--~----~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~ 73 (384)
T 3zrp_A 6 LHVG--PTTIKEDVLVAGLEN---NVGF--T----SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSL 73 (384)
T ss_dssp CCSS--CSCCCHHHHHHTTCC---SCCT--T----SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGG
T ss_pred ccCC--CCCCCHHHHHHhhcc---cccc--c----cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhh
Confidence 4555 445788887665532 1211 1 22235677889999999999988 78889999998887 55444
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cCC-CEeEEEEEcC-CCceeecchHH
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSG-DVCGVLVQYP-GTEGEVLDYGD 205 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~ 205 (946)
+. +||+|++++..|++. .+...++..|++++.++.+ ++++ +++ ++++|++.+| |.+|.+.|+++
T Consensus 74 -~~--~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~ 148 (384)
T 3zrp_A 74 -LK--PNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKD 148 (384)
T ss_dssp -CC--TTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHH
T ss_pred -cC--CCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHH
Confidence 23 899999999998763 3334456789999988753 4444 554 7999999987 78999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcC-CCceEeEeecC
Q 002263 206 FIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMM-PGRIVGVSIDS 282 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~l-p~~~~G~s~d~ 282 (946)
|.++|+++|+++++|. .++.+... +..++|+|++++|. |+|++ ++++|++++++++++.+ .+..
T Consensus 149 i~~l~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-----~~g~g~~~~~~~~~~~~~~~~~------- 215 (384)
T 3zrp_A 149 VINKIRKYVELIVVDG-VSSVGAEEVKAEEWNVDVYLTASQKALGS-----AAGLGLLLLSPKALSILDSQNS------- 215 (384)
T ss_dssp HHHHHGGGEEEEEEEC-TTTTTTSCCCTTTTTCSEEEEETTSTTCC-----CSSEEEEEECHHHHHHHHHCCC-------
T ss_pred HHHHHHhcCCEEEEEC-cccccCccccccccCCCEEEecCcccccC-----CCceEEEEECHHHHHHhcCCCC-------
Confidence 9999999999999953 34554432 34567999999998 77753 45689999999887765 3210
Q ss_pred CCCcceEEecccccc-c------ccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCE
Q 002263 283 SGKPALRVAMQTREQ-H------IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 355 (946)
Q Consensus 283 ~g~~~~~l~l~tre~-~------irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 355 (946)
...+.+++..... . .....||.|+ ....++.+++ .++...|++++.++..++++++.+.|+++| +
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 287 (384)
T 3zrp_A 216 --IAGYYLDLRNWLPVMRGAEEGKAAYFATPPV---HVILQLAEAF--RLIEKEGIENRIKRHTMVASAIRAGLEALG-L 287 (384)
T ss_dssp --SCCSTTCHHHHHHHHHHHHTTCCCCSSCCCH---HHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred --CCcccccHHHHHHHHHhhcccCCCcCCCCCH---HHHHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 0112111110000 0 1111145555 3333444443 455566789999999999999999999996 8
Q ss_pred EEcCCC----CcCeEEEecCC--HHHHHHHHHHcCCeeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 356 EVQGLP----FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 356 ~~~~~~----~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~---~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++.... ....+.+..++ ..++.+.|.++||.++.-. .+.+|++++.++|++|+++++++|..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 358 (384)
T 3zrp_A 288 EIVARRPESYSNTVTGVILKVADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIER 358 (384)
T ss_dssp CBSCSSGGGBCSSEEEEECSSSCHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred eEccCcccccCccEEEEECCCCCHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHH
Confidence 876433 12334566664 7899999999999887422 16799999999999999999999974
No 58
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.86 E-value=1.4e-20 Score=212.86 Aligned_cols=309 Identities=10% Similarity=0.044 Sum_probs=204.6
Q ss_pred cHHHHHHHHHHHHHHhhCCCc--c-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcCCE
Q 002263 517 GYQEMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMK 591 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~--~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G~~ 591 (946)
+..+...++++++++++|.+. . .+.+++|+++...++.++. .++++||++...+..+. ..+...|.+
T Consensus 49 ~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~g~~ 120 (376)
T 3f0h_A 49 EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF--------TKKDKVLVIDGGSFGHRFVQLCEIHEIP 120 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC--------CTTCCEEEEESSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc--------CCCCeEEEEeCChhhHHHHHHHHHcCCc
Confidence 345677889999999999874 2 3446677766644433321 24677888764322232 236678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 669 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~ 669 (946)
++.++.+.++.+|+++|+++++ +++++|++++| |.+|.+. ++++|+++|+++|+++++|+++. .+... ....
T Consensus 121 ~~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~~~~--~~~~~~~~~~ 194 (376)
T 3f0h_A 121 YVALKLEHGKKLTKEKLYEYDN---QNFTGLLVNVDETSTAVLY-DTMMIGEFCKKNNMFFVCDCVSA--FLADPFNMNE 194 (376)
T ss_dssp EEEEECCTTCCCCHHHHHTTTT---SCCCEEEEESEETTTTEEC-CHHHHHHHHHHTTCEEEEECTTT--TTTSCCCHHH
T ss_pred eEEEeCCCCCCCCHHHHHHhhc---cCceEEEEecccCCcceec-CHHHHHHHHHHcCCEEEEEcCcc--ccCccccccc
Confidence 9999998888999999999875 78999999988 6789998 69999999999999999998754 22221 1234
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC-CccccCCCCCCC---CCCCCCCCcccCccchhhHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPAP---EKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~-~~v~~~~d~~~~---~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
+|+|++++++||+|+ |++|+|++++++++.+.+.. ...+...+...+ .....+.... +...+.++.
T Consensus 195 ~~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~ 264 (376)
T 3f0h_A 195 CGADVMITGSQKVLA-----CPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTP-----AVGILLQIN 264 (376)
T ss_dssp HTCSEEEEETTTTTC-----CCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCC-----CHHHHHHHH
T ss_pred cCccEEEecCccccc-----CCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCC-----cHHHHHHHH
Confidence 689999999999984 45788999998776544321 100000000000 0000111111 111223334
Q ss_pred HHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-Cccc
Q 002263 746 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHG 822 (946)
Q Consensus 746 a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi~~ 822 (946)
+.+..+..+ |+.+..++...+++++.+.|++. +.+. .+ ......+.+.. .+.+..++.++|.++ ||.+
T Consensus 265 ~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~-~~~~~~~~~~~------~~~~~~~l~~~l~~~~gi~v 335 (376)
T 3f0h_A 265 ERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELV--SE-SPANGVTSVHP------TTANAYDIFLKLKDEYGIWI 335 (376)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEEC--CS-SBBTTEEEEEE------SSSCHHHHHHHHHHHSSEEC
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccC--cc-ccCceEEEEeC------CCCCHHHHHHHHHHhCCEEE
Confidence 455666666 68888888888999999999875 2222 11 11111233332 246789999999988 9986
Q ss_pred CCCC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 823 PTMS-WPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 823 ~~~~-~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.... ....+.+|+++...+|++|+++++++|+++++
T Consensus 336 ~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 336 CPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp EECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred ecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 4321 11357899999988999999999999998764
No 59
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=1.7e-19 Score=201.84 Aligned_cols=318 Identities=12% Similarity=0.022 Sum_probs=222.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 138 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~ 138 (946)
+..| |...|+.+.+.+.+... ++ +. .+..+.+.++++.+++++|.++.++.+++|||.+++.++.++ .
T Consensus 5 ~~~~--p~~~~~~v~~a~~~~~~----~~-~~----~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~-~ 72 (352)
T 1iug_A 5 LTPG--PVRLHPKALEALARPQL----HH-RT----EAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNL-F 72 (352)
T ss_dssp CSSS--SCCCCHHHHHHHHSCCC----CT-TS----HHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHH-C
T ss_pred ccCC--CCCCCHHHHHHhccCCC----Cc-cC----HHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhc-c
Confidence 3555 34577888777775432 11 11 233456778999999999998778889999998888877665 2
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-----cccccC-CCEeEEEEEcC-CCceeecchHHHHHHHH
Q 002263 139 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-----DIDYKS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAH 211 (946)
Q Consensus 139 ~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-----~l~~i~-~~t~~v~v~~p-n~~G~i~di~~i~~~a~ 211 (946)
. +||+|+++...|+++. +...++..|++++.++.+ +++.+. +++++|++.+| |.+|.+.|+++|.++|+
T Consensus 73 ~--~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 148 (352)
T 1iug_A 73 A--PGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLLVHSETSTGALADLPALARAFK 148 (352)
T ss_dssp C--TTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred C--CCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHhccCCcEEEEEEecCCcceecCHHHHHHHHH
Confidence 3 7899999999999976 222234568888887653 222222 57889999988 77999999999999999
Q ss_pred hC--CcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcc
Q 002263 212 AN--GVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 287 (946)
Q Consensus 212 ~~--gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~ 287 (946)
++ |+++++|. ..+++... +..++|+|++++|. |++++ ++|+|++++++++++.+.. + .
T Consensus 149 ~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-----~~g~G~~~~~~~~~~~~~~---~---------~ 210 (352)
T 1iug_A 149 EKNPEGLVGADM-VTSLLVGEVALEAMGVDAAASGSQKGLMC-----PPGLGFVALSPRALERLKP---R---------G 210 (352)
T ss_dssp HHCTTCEEEEEC-TTTBTTBCCCSGGGTCSEEEEESSSTTCC-----CSCEEEEEECHHHHHTCCC---C---------S
T ss_pred hhCCCCEEEEEC-CccccCcceeccccCeeEEEecCcccccC-----CCceeEEEECHHHHHHhhC---C---------C
Confidence 99 99999953 34444332 23457899999998 65743 3468999999988777643 1 0
Q ss_pred eEEeccc--ccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-CcC
Q 002263 288 LRVAMQT--REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFD 364 (946)
Q Consensus 288 ~~l~l~t--re~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~ 364 (946)
+.+.+.. ..+..++..+|.|. ....++.+++ ..+... ++++.++..++++++.+.|+++| +++..+. ...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~a~~~al--~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 283 (352)
T 1iug_A 211 YYLDLARELKAQKEGESAWTPAI---NLVLAVAAVL--EEVLPR-LEEHLALKAWQNALLYGVGEEGG-LRPVPKRFSPA 283 (352)
T ss_dssp STTCHHHHHHHHTTTCCSSCCCH---HHHHHHHHHH--HHHGGG-HHHHHHHHHHHHHHHHHHHHHTT-CEESCSSBCTT
T ss_pred ceeeHHHHHhhcccCCCCCCCCH---HHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHHHHHHCC-CcccccccCCe
Confidence 1111110 00111233455554 2333444443 344333 88899999999999999999986 8887532 233
Q ss_pred eEEEecC-C--HHHHHHHHHHcCCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 365 TVKVKCA-D--AHAIASAAYKIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 365 ~~~i~~~-~--~~~v~~~L~~~GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+..+ + ..++.++|.++||.++.. .++.+|++++..+|++|+++++++|..
T Consensus 284 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 343 (352)
T 1iug_A 284 VAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFRE 343 (352)
T ss_dssp CEEEECCTTCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHH
Confidence 4666665 3 788999999999988653 257899999999999999999999973
No 60
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.86 E-value=5.4e-20 Score=210.61 Aligned_cols=330 Identities=11% Similarity=0.045 Sum_probs=224.8
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcc-eEEcccHHHHHHHHHHHh
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~-~sl~~~~Ta~~ea~~la~ 136 (946)
..+.| |..+|+.+.+.+.+.. + ..+.++ ..+.+.++++.+++++|.+..+ +.+..+||.++++++.++
T Consensus 16 ~~~pg--p~~~~~~v~~a~~~~~-~----~~~~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~ 84 (411)
T 3nnk_A 16 LMGPG--PINADPRVLRAMSSQL-I----GQYDPA----MTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSA 84 (411)
T ss_dssp EESSS--CCCCCHHHHHHHTSCC-C----CTTCHH----HHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHH
T ss_pred eecCC--CCCCCHHHHHHhhccc-c----ccccHH----HHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHh
Confidence 44555 5568888876665422 1 122222 2366778899999999998776 556677888888777665
Q ss_pred ccccCCCCEEEEcCCCCHH--HHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceeecch
Q 002263 137 NIQKGKKKTFIIASNCHPQ--TIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDY 203 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps--~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di 203 (946)
+. +||+|+++...|++ +... ++..|++++.++. ++|++ +++ ++++|++++| |.+|.+.|+
T Consensus 85 -~~--~gd~Vl~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 157 (411)
T 3nnk_A 85 -IR--PGDKVLVPVFGRFGHLLCEI----ARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPL 157 (411)
T ss_dssp -CC--TTCEEEEEECSHHHHHHHHH----HHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred -cC--CCCEEEEecCCchHHHHHHH----HHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccH
Confidence 33 89999999999987 3333 3346888888765 34555 554 8999999987 789999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCc------e
Q 002263 204 GDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR------I 275 (946)
Q Consensus 204 ~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~------~ 275 (946)
++|.++||++|+++++|. ..+.+.. .+..++|+|+++++. |+|++ ++++|++++++++.+.+... .
T Consensus 158 ~~i~~l~~~~~~~li~De-a~~~~~~~~~~~~~~~d~~~~s~~K~l~~-----~~g~g~~~~~~~~~~~~~~~~~~~~~~ 231 (411)
T 3nnk_A 158 AELGEICRRYDALFYTDA-TASLGGNPLETDVWGLDAVSAGMQKCLGG-----PSGTSPITLSARMEEAIRRRKCVEEGI 231 (411)
T ss_dssp TTHHHHHHHHTCEEEEEC-TTTBTTBCCCTTTTTCSEEECCSTTTTCC-----CSSEEEEEECHHHHHHHHTTCCCCGGG
T ss_pred HHHHHHHHHcCCEEEEEC-CcccCCcccchhccCCcEEEecCccccCC-----CCceEEEEECHHHHHHHhhcccccccc
Confidence 999999999999999953 3455543 244678999999998 66653 34689999999876654221 1
Q ss_pred EeEeec---CCCCcceEEecccc---cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 002263 276 VGVSID---SSGKPALRVAMQTR---EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 349 (946)
Q Consensus 276 ~G~s~d---~~g~~~~~l~l~tr---e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L 349 (946)
.|.... ....+.+.+++... .+..+++.+|.|+. ...++.+++ .++..+|++++.++..++++++++.|
T Consensus 232 ~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~l~~~L 306 (411)
T 3nnk_A 232 RTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATT---ALFGARECA--RLILQEGLDYGIARHKLHGDALVKGI 306 (411)
T ss_dssp CCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHH---HHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCCcccccchHHHHhhhccccCCCCCCCHH---HHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 110000 00011111111000 01223455777763 333444443 45556689999999999999999999
Q ss_pred hcCCCEEEcCCC---CcCeEEEecC-C--HHHHHHHHHHc-CCeeee----ecCCeEEEEe-ccCCCHHHHHHHHHHHhC
Q 002263 350 KKLGTVEVQGLP---FFDTVKVKCA-D--AHAIASAAYKI-EMNLRV----VDSNTVTASF-DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 350 ~~~g~~~~~~~~---~~~~~~i~~~-~--~~~v~~~L~~~-GI~~~~----~~~~~lris~-~~~~t~edid~ll~~l~~ 417 (946)
+++| +++.... ....+.+.++ + ..++.+.|.++ ||.++. ..++.+|+++ ...+|++|+++++++|+.
T Consensus 307 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 385 (411)
T 3nnk_A 307 QAMG-LETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEA 385 (411)
T ss_dssp HHTT-CCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHcC-CEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence 9987 8876422 1234556664 2 78899999876 998864 2357899998 667799999999999974
No 61
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.86 E-value=3.2e-20 Score=211.48 Aligned_cols=309 Identities=15% Similarity=0.131 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHHhhCCCcc--cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC--CHHHHHHcCCEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT--NPATAAMCGMKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~--~~~~a~~~G~~vv 593 (946)
..+...++++++++++|.+.. .+.+++|+++...++.++. .++++|+++...|.. ....+...|++++
T Consensus 65 ~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~ 136 (393)
T 1vjo_A 65 FLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAV--------EPGDVVLIGVAGYFGNRLVDMAGRYGADVR 136 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC--------CTTCEEEEEESSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhcc--------CCCCEEEEEcCChhHHHHHHHHHHcCCceE
Confidence 446778899999999999743 3555667666544443331 246789998887766 5556778999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCccC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIG 671 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~G 671 (946)
.++.++++.+|+++|+++++++ ++++|++++| |.+|.+. ++++|.++|+++|+++++|+++.. +... ....++
T Consensus 137 ~v~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~Dea~~~--g~~~~~~~~~~ 211 (393)
T 1vjo_A 137 TISKPWGEVFSLEELRTALETH--RPAILALVHAETSTGARQ-PLEGVGELCREFGTLLLVDTVTSL--GGVPIFLDAWG 211 (393)
T ss_dssp EEECCTTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEEC-CCTTHHHHHHHHTCEEEEECTTTT--TTSCCCTTTTT
T ss_pred EEecCCCCCCCHHHHHHHHhhC--CceEEEEeccCCCcceec-cHHHHHHHHHHcCCEEEEECCccc--cCcCCcccccC
Confidence 9999888899999999999831 7889999999 6789998 799999999999999999998762 2221 123468
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCC-------CCccccCCCCCCCCC-CCCCCCcccCccchhhHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-------SHPVVSTGGIPAPEK-SQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp-------~~~v~~~~d~~~~~~-~~~~~~i~~~~~g~~~~~~~ 743 (946)
.|+++.++||+|+.| .|+|++++++++.+.+. +...+.+ + ..+. ........+ .+.....+
T Consensus 212 ~di~~~s~sK~l~~~-----~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~g~---~~~~~~~a 280 (393)
T 1vjo_A 212 VDLAYSCSQKGLGCS-----PGASPFTMSSRAIEKLQRRRTKVANWYLDMN--L-LGKYWGSERVYHHT---APINLYYA 280 (393)
T ss_dssp CSEEECCSSSTTCSC-----SSCEEEEECHHHHHHHHTCSSCCSCSTTCHH--H-HHHHHSTTCCCCSC---CCHHHHHH
T ss_pred ccEEEEcCcccccCC-----CceEEEEECHHHHHHHhccCCCCCceecCcH--h-hhhhhccCCCCCCC---CCHHHHHH
Confidence 899999999998532 37899999877554331 1000000 0 0000 000000101 12223334
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCc-eeeeEEEecccccccCCCCHHHHHHHHHHC-Cc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGT-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GF 820 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~-~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi 820 (946)
+.+.+..+..+++.+..++...+++++.+.|++. +.+. .+.+. ..+.+.+.++ .+.+..++.++|.++ |+
T Consensus 281 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~gi 353 (393)
T 1vjo_A 281 LREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLH--VEKEYRLPTLTTVCIP-----DGVDGKAVARRLLNEHNI 353 (393)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBS--SCGGGBCSSEEEEECC-----TTCCHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCccc--CCccccCCcEEEEEcC-----CCCCHHHHHHHHHhhCCE
Confidence 4556666666678888888889999999999875 4332 22121 1223445543 246788999999987 99
Q ss_pred ccCCCC-CCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHH
Q 002263 821 HGPTMS-WPVPGTLMIEPT-ESESKEELDRYCDALISIR 857 (946)
Q Consensus 821 ~~~~~~-~p~~~~lri~~t-~~~t~~eid~~~~aL~~i~ 857 (946)
.+.... +..++.+||++. ...+++++++++++|++++
T Consensus 354 ~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 354 EVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 864322 223589999964 4567778999999998764
No 62
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.86 E-value=5.8e-20 Score=208.65 Aligned_cols=309 Identities=13% Similarity=0.101 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVS 594 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~ 594 (946)
+...++++.+++++|.+... +..++|+++...++.+++ ..++++|+++...|+.+... +...|++++.
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~-------~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 131 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLD-------WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRF 131 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSC-------CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCC-------CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEE
Confidence 45678999999999987533 455666666544433321 12568999998877665432 4678999999
Q ss_pred EcCC--CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHH----HcCCEEEEecccccccccccCC
Q 002263 595 VGTD--AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIH----DNGGQVYMDGANMNAQVGLTSP 667 (946)
Q Consensus 595 v~~~--~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~----~~g~ll~vD~a~~~a~~gl~~p 667 (946)
++.+ .++.+|+++|+++++ +++++|++++|+ .+|.+. ++++|.++|+ ++|+++++|+++..+...+ ..
T Consensus 132 v~~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~-~~ 206 (390)
T 1elu_A 132 FPVAATLNQGDAAAVLANHLG---PKTRLVILSHLLWNTGQVL-PLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPL-DF 206 (390)
T ss_dssp ECCGGGSSSSCHHHHHHTTCC---TTEEEEEEESBCTTTCCBC-CHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCC-CT
T ss_pred EcCCCCCCccchHHHHHHhcC---CCceEEEEeccccCCceec-CHHHHHHHHhhhhhhcCcEEEEEcccccCCcCC-Ch
Confidence 9987 568899999999986 689999999995 689998 6999999999 9999999999875322111 12
Q ss_pred CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC---CCCCCC---CC--CCCCCcccCccchhh
Q 002263 668 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG---GIPAPE---KS--QPLGTIAAAPWGSAL 739 (946)
Q Consensus 668 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~---d~~~~~---~~--~~~~~i~~~~~g~~~ 739 (946)
..++.|+++.++||++ +||+|+|++++++++.+.+.....+... .+.... .+ ... ...+. +..
T Consensus 207 ~~~~~d~~~~s~~K~~-----~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~ 277 (390)
T 1elu_A 207 SRLEVDYYAFTGHKWF-----AGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRF-EVATS---AYP 277 (390)
T ss_dssp TTSCCSEEEEESSSTT-----CCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGG-CCSCC---CHH
T ss_pred hhcCCCEEEccccccc-----cCCCceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhh-CCCCC---CHH
Confidence 3468899999999976 4667899999998877665322211100 000000 00 000 00110 122
Q ss_pred HHHHHHHHHHHHcHhh-HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 740 ILPISYTYIAMMGSKG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eG-l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
...++.+.+..+..+| +.+..++...+++++.+.|++...+.+..+.....+-+.++++ .+.+..++.++|.++
T Consensus 278 ~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~ 352 (390)
T 1elu_A 278 QYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVD-----SPLGHRAIVQKLEEQ 352 (390)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEEC-----SSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcC-----CCCCHHHHHHHHHHC
Confidence 2233344555555555 7777788888999999999874233222110001112445553 245788999999999
Q ss_pred CcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 819 Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
||.+.... .++.+||+++...+++|+++++++|+++
T Consensus 353 gi~v~~~~--~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 353 RIYLRTIA--DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp TEECEEET--TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred CEEEEecC--CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 99875322 1478999998889999999999998753
No 63
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=3.8e-20 Score=207.14 Aligned_cols=308 Identities=11% Similarity=0.065 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcCCEEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKIVS 594 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G~~vv~ 594 (946)
..+.+.++++++++++|.+.. .+.+++|+++...++.++ . .++++|+++...|.++. ..+...|++++.
T Consensus 32 ~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~---~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 103 (352)
T 1iug_A 32 AREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNL---F-----APGERVLVPVYGKFSERFYEIALEAGLVVER 103 (352)
T ss_dssp HHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHH---C-----CTTCEEEEEECSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhc---c-----CCCCeEEEEeCCchhHHHHHHHHHcCCceEE
Confidence 345677899999999999743 355566776664444332 1 24688999888776654 224558999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc--CCEEEEecccccccccccCCCccC
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+++++++.+|+++|++ +++++|++++| |.+|.+. ++++|.++|+++ |+++++|+++..+...+ ....++
T Consensus 104 v~~~~~~~~d~~~l~~------~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-~~~~~~ 175 (352)
T 1iug_A 104 LDYPYGDTPRPEDVAK------EGYAGLLLVHSETSTGALA-DLPALARAFKEKNPEGLVGADMVTSLLVGEV-ALEAMG 175 (352)
T ss_dssp EECCTTCCCCTTTSCC------SSCSEEEEESEETTTTEEC-CHHHHHHHHHHHCTTCEEEEECTTTBTTBCC-CSGGGT
T ss_pred EeCCCCCCCCHHHHhc------cCCcEEEEEEecCCcceec-CHHHHHHHHHhhCCCCEEEEECCccccCcce-eccccC
Confidence 9998888899988765 46788999998 5789998 799999999999 99999999875322111 123458
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCC--CCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA--PEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~--~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
+|++++++||++. |++|+|++++++++.+.+..+. ...+... ..........+. +.....++.+.+.
T Consensus 176 ~d~~~~s~~K~~~-----~~~g~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~al~ 244 (352)
T 1iug_A 176 VDAAASGSQKGLM-----CPPGLGFVALSPRALERLKPRG--YYLDLARELKAQKEGESAWTP----AINLVLAVAAVLE 244 (352)
T ss_dssp CSEEEEESSSTTC-----CCSCEEEEEECHHHHHTCCCCS--STTCHHHHHHHHTTTCCSSCC----CHHHHHHHHHHHH
T ss_pred eeEEEecCccccc-----CCCceeEEEECHHHHHHhhCCC--ceeeHHHHHhhcccCCCCCCC----CHHHHHHHHHHHH
Confidence 9999999999873 4457899999877554432100 0000000 000000000010 1222223334455
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP- 828 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p- 828 (946)
.+... +.+..++...+++++.+.|++. .+.+..+. ...+.+.++++ .+.+..++.++|.++||.+.....+
T Consensus 245 ~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~l~~~gi~v~~~~~~~ 316 (352)
T 1iug_A 245 EVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPVPKR-FSPAVAAFYLP-----EGVPYARVKEAFAQRGAVIAGGQGPL 316 (352)
T ss_dssp HHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEESCSS-BCTTCEEEECC-----TTCCHHHHHHHHHTTTEECEECCGGG
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCcccccc-cCCeEEEEEcC-----CCCCHHHHHHHHHHCCEEEEeCCCcc
Confidence 55444 6777778888999999999875 33222221 01222456654 2467889999999999987533222
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..+.+|+++...+|++|+++++++|+++++++
T Consensus 317 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 317 KGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp TTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 25789999998889999999999999987664
No 64
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.86 E-value=6.1e-20 Score=210.55 Aligned_cols=332 Identities=13% Similarity=0.101 Sum_probs=223.7
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceE-EcccHHHHHHHHHHHh
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNAS-LLDEGTAAAEAMAMCN 136 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~s-l~~~~Ta~~ea~~la~ 136 (946)
+++.+ |..+|+.+.+.+.+ ..+ ..|.+ ...+...++++.+++++|.+.+++. +..++|.++++++.++
T Consensus 14 ~~~p~--p~~~~~~v~~a~~~-~~~----~~~~~----~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l 82 (416)
T 3isl_A 14 IMTPG--PVEVDPRVLRVMST-PVV----GQFDP----AFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASV 82 (416)
T ss_dssp ECSSS--SCCCCHHHHHHTTS-CCC----CTTSH----HHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHH
T ss_pred eecCC--CcCcCHHHHHHhcc-cCC----CCccH----HHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHh
Confidence 34555 55678887755443 221 12222 2246677889999999999887665 6678888888777665
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cC-CCEeEEEEEcC-CCceeecchHH
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KS-GDVCGVLVQYP-GTEGEVLDYGD 205 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~-~~t~~v~v~~p-n~~G~i~di~~ 205 (946)
+. +||+|+++...|+++. +...++..|++++.++.+ ++++ ++ +++++|++++| |.+|.+.|+++
T Consensus 83 -~~--~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~ 157 (416)
T 3isl_A 83 -IE--PEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKA 157 (416)
T ss_dssp -CC--TTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHH
T ss_pred -cC--CCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHH
Confidence 33 8999999999998732 222244568888887653 4555 55 58899999987 78999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCce---EeEee
Q 002263 206 FIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI---VGVSI 280 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~---~G~s~ 280 (946)
|.++||++|+++++|. .++.+... +..++|+|+++++. |++++ ++++|++++++++.+.+.... +||..
T Consensus 158 i~~l~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~~~s~~K~l~g-----~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~ 231 (416)
T 3isl_A 158 IGEACRTEDALFIVDA-VATIGGCEVKVDEWKIDAAIGGTQKCLSV-----PSGMAPITYNERVADVIAARKKVERGIAT 231 (416)
T ss_dssp HHHHHHHTTCEEEEEC-TTTTTTSCCCTTTTTCSEEECCSSSTTCC-----CSSEEEEEECHHHHHHHHTC---------
T ss_pred HHHHHHHcCCEEEEEC-CccccCCCcchhhcCCCEEEecCccccCC-----CCCeEEEEECHHHHHHhhccccccccccc
Confidence 9999999999999953 44555442 34568999999998 66643 456899999998877664321 33311
Q ss_pred cC------CC--CcceEEecccc---cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 002263 281 DS------SG--KPALRVAMQTR---EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 349 (946)
Q Consensus 281 d~------~g--~~~~~l~l~tr---e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L 349 (946)
.. .| ...+.+..... .+..+.+.+|.|+ ....++.+++ ..+...|++++.++..++++++.+.|
T Consensus 232 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~l~~~L 306 (416)
T 3isl_A 232 QADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEAT---TMLYALREGV--RLVLEEGLETRFERHRHHEAALAAGI 306 (416)
T ss_dssp ---------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCH---HHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 00 00 00011110000 0122334566665 3344444443 45556679999999999999999999
Q ss_pred hcCCCEEEcCCC--C-cCeEEEecC-C--HHHHHHHHHHc-CCeeee----ecCCeEEEEeccCCCHHH-HHHHHHHHhC
Q 002263 350 KKLGTVEVQGLP--F-FDTVKVKCA-D--AHAIASAAYKI-EMNLRV----VDSNTVTASFDETTTLED-VDKLFIVFAG 417 (946)
Q Consensus 350 ~~~g~~~~~~~~--~-~~~~~i~~~-~--~~~v~~~L~~~-GI~~~~----~~~~~lris~~~~~t~ed-id~ll~~l~~ 417 (946)
+++| +++.... . ...+.+..+ + ..++.+.|.++ ||.++. ..++.+|++++.+++.+| +++++++|+.
T Consensus 307 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~ 385 (416)
T 3isl_A 307 KAMG-LRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEA 385 (416)
T ss_dssp HHTT-CCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHcC-CEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHH
Confidence 9987 8876432 1 234556664 3 78999999887 998864 235789999988777776 9999999973
No 65
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.86 E-value=8.5e-21 Score=215.87 Aligned_cols=293 Identities=14% Similarity=0.076 Sum_probs=202.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhc--CCCeEEEE
Q 002263 96 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD--GFDIKVVV 173 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~--~~gi~v~~ 173 (946)
...+.+.++++.+++++|.+ ..+.++.+||.++++++..+ . +||+||+++..|++... ...++ +.+.+++.
T Consensus 32 ~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~--~--~gd~vi~~~~~~~~~~~--~~~~~~~g~~~~~~~ 104 (379)
T 3ke3_A 32 AFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL--T--IDEDCLIIRNGWFSYRW--TQILEKGKFAKSSTV 104 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH--C--TTCEEEEEECSHHHHHH--HHHHHHHCCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC--C--CCCeEEEEeCCchhHHH--HHHHHHhCCCCceEE
Confidence 34478888999999999987 45667789999988865433 2 78999999998877532 11222 22345555
Q ss_pred ec-----------------cccccc-cC-CCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-
Q 002263 174 SD-----------------LKDIDY-KS-GDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL- 229 (946)
Q Consensus 174 ~~-----------------~~~l~~-i~-~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l- 229 (946)
++ ++++++ +. +++++|+++++ |.+|.+.| +++|+++||++|+++++|. ..+ |..
T Consensus 105 ~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~-~~~-g~~~ 182 (379)
T 3ke3_A 105 LTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDC-IAS-GCVW 182 (379)
T ss_dssp EECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEEC-TTC-TTCC
T ss_pred EeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEe-ccc-CCcc
Confidence 43 244555 53 47888988875 78999999 9999999999999999953 334 433
Q ss_pred CCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccc-------ccccc
Q 002263 230 KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE-------QHIRR 301 (946)
Q Consensus 230 ~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre-------~~irr 301 (946)
....++|+|++++++ |+|++ +||+|++++++++.+.+.+.. .+.|.+++.... ...+.
T Consensus 183 ~~~~~~~~d~~~~s~~K~l~~-----~~g~g~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~ 248 (379)
T 3ke3_A 183 LDMKELGIDVLISAPQKGWSS-----TPCAGLVMLSAAAIKKVESTE---------SNCFSLDLKQWLTIMRAYENGGHA 248 (379)
T ss_dssp CCHHHHTCSEEEECTTTTTCS-----CCCEEEEEECHHHHHHHHTCC---------CSCSTTCHHHHHHHHHHHHTTSCC
T ss_pred ccccccCCCEEEecchhhcCC-----CCceEEEEECHHHHHhhhcCC---------CCceeecHHHHHHHHHhhhccCCC
Confidence 233567999999998 66753 356899999999877663310 111222221111 11111
Q ss_pred cccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--CcCe-EEEecCC-HHHHH
Q 002263 302 DKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDT-VKVKCAD-AHAIA 377 (946)
Q Consensus 302 e~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~~~-~~i~~~~-~~~v~ 377 (946)
..+|+|+ ..++++.+++ .++..+|++++.++..+++++|++.|+++| ++++.++ .... +.+..++ ...+.
T Consensus 249 ~~~t~~~---~~~~a~~aal--~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~~~~~~~~ 322 (379)
T 3ke3_A 249 YHATMPT---DSLRQFRDAI--LEAKEIGFDILRDAQWELGNRVRKVLTDKG-IESVAAEGFEAPGVVVSYTERDDMHKG 322 (379)
T ss_dssp CSSCCCH---HHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSBCTTCBCSSEEEEECSCHHHHSS
T ss_pred CCCCCCH---HHHHHHHHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHcC-CEecCCccccCceEEEEccCCcchHHH
Confidence 2235554 4555666665 555567899999999999999999999998 8876432 2232 3344444 33347
Q ss_pred HHHHHcCCeeeeec---------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 378 SAAYKIEMNLRVVD---------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 378 ~~L~~~GI~~~~~~---------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.|.++||.+..-. .+.+|+|++.++|++||++++++|+.
T Consensus 323 ~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~ 371 (379)
T 3ke3_A 323 SAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEK 371 (379)
T ss_dssp HHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHH
T ss_pred HHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHH
Confidence 88889999876431 57899999999999999999999973
No 66
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.86 E-value=9.7e-21 Score=230.56 Aligned_cols=331 Identities=12% Similarity=0.056 Sum_probs=225.3
Q ss_pred ceeecCCCCCCCCCcHHHHHHHHh-CC---cccccc--CCChhhhhh-----hHH----HHHHHHHHHHHHHhCCCCcce
Q 002263 55 YKSFIGMGYYNTHVPPVILRNIME-NP---AWYTQY--TPYQAEIAQ-----GRL----ESLLNFQTMIADLTGLPMSNA 119 (946)
Q Consensus 55 ~~~~~G~g~~~~~~p~~i~~~i~~-~~---~~~t~~--~pyq~e~sq-----g~l----~~l~e~q~~la~L~g~~~~~~ 119 (946)
...|.+.+.|++++|......-+. .| +|++.| ++|++++++ |.+ ..+.++|+.+|+++|++.+ +
T Consensus 114 l~~~~~~~~~~~~~Pgh~~g~~~~~~p~g~~~~~~~g~~~~~~di~~~~~~l~~l~~~~~~i~e~e~~lA~~~gae~~-i 192 (730)
T 1c4k_A 114 LKEYVSRYLIQFDCPGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLLIHEGPAVAAEKHAARVYNADKT-Y 192 (730)
T ss_dssp HHHHHTSCCCCCSSSTTTTTTTGGGSHHHHHHHHHHCSHHHHSCCCTTSGGGCBTTTTBTHHHHHHHHHHHHTTCSEE-E
T ss_pred HHHHHhcCCcccccCccccccccCCcchhhHHHhhcchhhhhHHhhhhhccCCCccCChHHHHHHHHHHHHHHCCCcE-E
Confidence 346889999999988865311000 00 444544 678888777 555 6789999999999999864 5
Q ss_pred EEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe-------------ccccc-----cc
Q 002263 120 SLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS-------------DLKDI-----DY 181 (946)
Q Consensus 120 sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~-------------~~~~l-----~~ 181 (946)
.+++|+|+++.++++++. . +||+||+++.+|+++...+ ++..|++++++ |+++| ++
T Consensus 193 ~v~nGtt~an~~ai~al~-~--pGD~VLv~~~~H~S~~~~~---~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~ 266 (730)
T 1c4k_A 193 FVLGGSSNANNTVTSALV-S--NGDLVLFDRNNHKSVYNSA---LAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRE 266 (730)
T ss_dssp EESSHHHHHHHHHHHHHC-C--TTCEEEEETTCCHHHHHHH---TTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHH
T ss_pred EECCHHHHHHHHHHHHhc-C--CCCEEEEcCCchHHHHHHH---HHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHH
Confidence 566777788888877763 3 8999999999999998872 23467776654 45667 66
Q ss_pred -cCCC------E----eEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccc----cC-C--CCC---CCccce--
Q 002263 182 -KSGD------V----CGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL----TI-L--KPP---GELGAD-- 238 (946)
Q Consensus 182 -i~~~------t----~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al----~~-l--~~~---~~~GaD-- 238 (946)
+.++ + ++|++++||++|.+.|+++|+++||++|++++|+. .++. +. . ..+ .++|+|
T Consensus 267 ~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDe-Ah~~~~~f~~~~~g~~~l~~~~~g~D~~ 345 (730)
T 1c4k_A 267 LAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDS-AWVGYEQFIPMMRNSSPLLIDDLGPEDP 345 (730)
T ss_dssp HTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEEC-TTCCGGGSSGGGGGGCTTSCCCCCTTSC
T ss_pred HhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEc-ccccccccCcccCCcCcccccccCCCCC
Confidence 6554 5 89999999999999999999999999999999943 2221 11 1 012 245898
Q ss_pred --EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 239 --IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 239 --i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
++++|+ |+|++|. ++|+++++++.+.. +...+ + . .. + +.....++.+|+|. ..+.
T Consensus 346 ~~iv~~S~hK~L~g~~-----~gg~I~v~~~~l~g-~~~~i----~----~-~~--~--~~~~~~~~stsp~~---~~ia 403 (730)
T 1c4k_A 346 GIIVVQSVHKQQAGFS-----QTSQIHKKDSHIKG-QLRYC----D----H-KH--F--NNSFNLFMSTSPFY---PMYA 403 (730)
T ss_dssp EEEEEECHHHHSSCCT-----TCEEEEEECGGGTT-STTCC----C----H-HH--H--HHHHHHHSCSSCCH---HHHH
T ss_pred CEEEEECCCCCCCCCC-----CEEEEEecchhhcC-ccccc----C----H-HH--H--HHHHHHhCCCCCcH---HHHH
Confidence 999998 7665332 36899898875421 00000 0 0 00 0 00001123344443 3333
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCCCC--------------------------------
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLPF-------------------------------- 362 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~~~-------------------------------- 362 (946)
++.+++ .++..++.++..++..+++++++++|++ +.|++++....
T Consensus 404 al~aA~--~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 481 (730)
T 1c4k_A 404 ALDVNA--AMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAY 481 (730)
T ss_dssp HHHHHH--HHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCC
T ss_pred HHHHHH--HHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccc
Confidence 444443 4454433355678889999999999998 53388863210
Q ss_pred ---------cCe--EEEecC------------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 363 ---------FDT--VKVKCA------------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 363 ---------~~~--~~i~~~------------~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+. ++|..+ + +.++.+.|.++||.++......+|++++..+|++|+++++++|..
T Consensus 482 ~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~ 561 (730)
T 1c4k_A 482 EGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQ 561 (730)
T ss_dssp TTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 122 666662 2 789999999999999887788999999999999999999999963
No 67
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.86 E-value=2.6e-19 Score=203.05 Aligned_cols=335 Identities=15% Similarity=0.126 Sum_probs=229.3
Q ss_pred HHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC-Cc
Q 002263 39 SQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP-MS 117 (946)
Q Consensus 39 ~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~-~~ 117 (946)
.+++++|+.+. +..+.+ ..+ +..+|+.+.+.+.+... . .|.+. ..+...++++.+++++|.+ ..
T Consensus 8 ~~~r~~f~~~~--~~~~l~--~~~--~~~~~~~v~~a~~~~~~--~---~~~~~----~~~~~~~~~~~la~~~g~~~~~ 72 (386)
T 2dr1_A 8 EAFKEVYEMVK--PKYKLF--TAG--PVACFPEVLEIMKVQMF--S---HRSKE----YRKVHMDTVERLREFLEVEKGE 72 (386)
T ss_dssp HHHHHHHHHHS--CCSEEC--CSS--SCCCCHHHHHHTTSCCC--C---TTSHH----HHHHHHHHHHHHHHHHTCSSSE
T ss_pred HHHHHHHhhcC--ccceee--cCC--CcCCcHHHHHHHhcccc--c---ccCHH----HHHHHHHHHHHHHHHhCCCCCc
Confidence 56788886542 333333 233 33567777666554322 1 23222 2566778889999999997 55
Q ss_pred ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHH--HHHHHHHhhcCCCeEEEEecc--------ccccc-c--CC
Q 002263 118 NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQ--TIDICITRADGFDIKVVVSDL--------KDIDY-K--SG 184 (946)
Q Consensus 118 ~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps--~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i--~~ 184 (946)
++.+++|||.+++.++.++ .. +||+|+++...|++ +...+ +..|++++.++. ++|++ + ++
T Consensus 73 ~v~~~~g~t~a~~~~~~~l-~~--~gd~vl~~~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~ 145 (386)
T 2dr1_A 73 VLLVPSSGTGIMEASIRNG-VS--KGGKVLVTIIGAFGKRYKEVV----ESNGRKAVVLEYEPGKAVKPEDLDDALRKNP 145 (386)
T ss_dssp EEEESSCHHHHHHHHHHHH-SC--TTCEEEEEESSHHHHHHHHHH----HHTTCEEEEEECCTTCCCCHHHHHHHHHHCT
T ss_pred EEEEeCChHHHHHHHHHHh-hc--CCCeEEEEcCCchhHHHHHHH----HHhCCceEEEecCCCCCCCHHHHHHHHhcCC
Confidence 6888999998888777665 23 78999999999998 44443 346888877664 34555 6 56
Q ss_pred CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CCCCCccceEEEecc-ccccccCCCCCCceEEE
Q 002263 185 DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFL 261 (946)
Q Consensus 185 ~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l 261 (946)
++++|++++| |.+|.+.|+++|.++|+++|+++++|. ..+.+.. .+..++|+|++++|. |+|++|. ++|++
T Consensus 146 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~-a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~-----g~G~~ 219 (386)
T 2dr1_A 146 DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDA-VSAMGGADIKFDKWGLDVVFSSSQKAFGVPP-----GLAIG 219 (386)
T ss_dssp TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEEC-TTTBTTBCCCTTTTTCSEEEEETTSTTCCCS-----SCEEE
T ss_pred CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEc-cccccCccccccccCCcEEEEeccccccCCC-----ceEEE
Confidence 8999999987 789999999999999999999999953 3444443 244678999999998 7776442 47999
Q ss_pred EEchhhhhcCCCc-eEeEeecCCCCcceEEeccc--cccc-ccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHH
Q 002263 262 ATSQEYKRMMPGR-IVGVSIDSSGKPALRVAMQT--REQH-IRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQ 336 (946)
Q Consensus 262 ~~~~~~~~~lp~~-~~G~s~d~~g~~~~~l~l~t--re~~-irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~ 336 (946)
++++++.+.+... ..| +.+++.. +..+ .+...+|.|. ....++.+++ ..+... |++++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~a~~~~l--~~~~~~g~~~~~~~ 284 (386)
T 2dr1_A 220 AFSERFLEIAEKMPERG----------WYFDIPLYVKYLKEKESTPSTPPM---PQVFGINVAL--RIIEKMGGKEKWLE 284 (386)
T ss_dssp EECHHHHHHHTTCTTCC----------STTCHHHHHHHHHHHSSCSSCCCH---HHHHHHHHHH--HHHHHTTCHHHHHH
T ss_pred EECHHHHHHHhcCCCCc----------eEEeHHHHHHhhccCCCCCCCCCH---HHHHHHHHHH--HHHHHhcCHHHHHH
Confidence 9999887766321 111 1111110 0010 1122233333 2222333333 444445 7889999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEcCCC---CcCeEEEecC-C--HHHHHHHHHHcCCeeeee----cCCeEEEEeccCCCHH
Q 002263 337 RVHGLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCA-D--AHAIASAAYKIEMNLRVV----DSNTVTASFDETTTLE 406 (946)
Q Consensus 337 ~~~~~a~~l~~~L~~~g~~~~~~~~---~~~~~~i~~~-~--~~~v~~~L~~~GI~~~~~----~~~~lris~~~~~t~e 406 (946)
+..++++++.+.|+++| +++.... ....+.+.++ + ..++.++|.++||.++.. .++.+|++++.++|++
T Consensus 285 ~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~ 363 (386)
T 2dr1_A 285 MYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFE 363 (386)
T ss_dssp HHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHH
T ss_pred HHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHH
Confidence 99999999999999986 8776431 2334566665 2 788999999999988653 3578999999999999
Q ss_pred HHHHHHHHHhC
Q 002263 407 DVDKLFIVFAG 417 (946)
Q Consensus 407 did~ll~~l~~ 417 (946)
|+++++++|+.
T Consensus 364 ~i~~~~~~l~~ 374 (386)
T 2dr1_A 364 DIQEMLDNLRE 374 (386)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999974
No 68
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.85 E-value=1e-19 Score=205.87 Aligned_cols=325 Identities=14% Similarity=0.073 Sum_probs=220.8
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceEE-cccHHHHHHHHHHH
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASL-LDEGTAAAEAMAMC 135 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~sl-~~~~Ta~~ea~~la 135 (946)
.++.| |..+|+.+.+.+.+... . .+. .+..+...++++.+++++|.+.. +..+ +++||.++++++.+
T Consensus 22 ~~~pg--p~~~~~~v~~a~~~~~~--~---~~~----~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~ 90 (376)
T 3f0h_A 22 NFTVG--PVMSSEEVRAIGAEQVP--Y---FRT----TEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMN 90 (376)
T ss_dssp ECSSS--SCCCCHHHHHHHTSCCC--C---CSS----HHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHH
T ss_pred eecCC--CCCCcHHHHHHhcCCCC--C---CCC----HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHh
Confidence 34555 55688888777664321 1 122 23346677888999999999753 4444 67889888877766
Q ss_pred hccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHH
Q 002263 136 NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGD 205 (946)
Q Consensus 136 ~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~ 205 (946)
+. . +||+|+++...+.+.... ..+...|++++.++. +++++ +++++++|++++| |.+|.+.|+++
T Consensus 91 ~~-~--~gd~vi~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 165 (376)
T 3f0h_A 91 CF-T--KKDKVLVIDGGSFGHRFV--QLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMM 165 (376)
T ss_dssp HC-C--TTCCEEEEESSHHHHHHH--HHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHH
T ss_pred cc-C--CCCeEEEEeCChhhHHHH--HHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHH
Confidence 52 3 889999988655443211 223345777776654 34556 6788999999987 78999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCC
Q 002263 206 FIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSS 283 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~ 283 (946)
|.++|+++|+++++|. ..+.+... +..++|+|++++++ |+|++ +||+|++++++++.+.+.....
T Consensus 166 i~~l~~~~~~~li~D~-~~~~~~~~~~~~~~~~d~~~~s~~K~l~~-----~~G~g~~~~~~~~~~~~~~~~~------- 232 (376)
T 3f0h_A 166 IGEFCKKNNMFFVCDC-VSAFLADPFNMNECGADVMITGSQKVLAC-----PPGISVIVLAPRGVERVEKSKV------- 232 (376)
T ss_dssp HHHHHHHTTCEEEEEC-TTTTTTSCCCHHHHTCSEEEEETTTTTCC-----CSSCEEEEECHHHHHHHHTCCC-------
T ss_pred HHHHHHHcCCEEEEEc-CccccCccccccccCccEEEecCcccccC-----CCceEEEEECHHHHHHhhcCCC-------
Confidence 9999999999999953 34444332 23457899999998 77753 4568999999988776532110
Q ss_pred CCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-
Q 002263 284 GKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP- 361 (946)
Q Consensus 284 g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~- 361 (946)
+.+.+.+....+.. ...+|.+.+....+.++.+++ .++..+ |++++.++..++++++++.|+++| +++....
T Consensus 233 --~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~ 306 (376)
T 3f0h_A 233 --RTMYFDLKDALKNQ-ERGQTPFTPAVGILLQINERL--KEIKKHGGADAEVARIASQAADFRAKIKDLP-FELVSESP 306 (376)
T ss_dssp --CCSTTCHHHHHHHH-TTTCCSSCCCHHHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS-EEECCSSB
T ss_pred --CceeecHHHHHhhc-ccCCCCCCCcHHHHHHHHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CccCcccc
Confidence 11111111111111 123455554444445555554 444455 799999999999999999999998 8887532
Q ss_pred CcCeEEEecCC--HHHHHHHHHHc-CCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 362 FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 362 ~~~~~~i~~~~--~~~v~~~L~~~-GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
....+.+..++ +.++.++|.++ ||.++.- .++.+|++++..+|++|+++++++|..
T Consensus 307 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~ 369 (376)
T 3f0h_A 307 ANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKD 369 (376)
T ss_dssp BTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 22234444333 78999999988 9988642 357899999999999999999999963
No 69
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.85 E-value=5.7e-19 Score=203.19 Aligned_cols=319 Identities=16% Similarity=0.142 Sum_probs=222.3
Q ss_pred CCcHHHHHHHHhCCcccccc-CCC--hhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc-ccCC
Q 002263 67 HVPPVILRNIMENPAWYTQY-TPY--QAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGK 142 (946)
Q Consensus 67 ~~p~~i~~~i~~~~~~~t~~-~py--q~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~-~~~~ 142 (946)
..|+.+.+.+.+.......| .|. ....+.+..+.+.++++.+++++|.++.++.+++|||.++++++.++.. ..++
T Consensus 33 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~ 112 (423)
T 3lvm_A 33 PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKK 112 (423)
T ss_dssp CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccC
Confidence 46777766766432200112 121 1234556678888999999999999988999999999888877665431 1126
Q ss_pred CCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHh
Q 002263 143 KKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA 212 (946)
Q Consensus 143 gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~ 212 (946)
||+|+++...|+++...+..+ +..|++++.++. ++|++ +++++++|++.+| |.+|.+.|+++|.++|++
T Consensus 113 gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 191 (423)
T 3lvm_A 113 GKHIITSKTEHKAVLDTCRQL-EREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRA 191 (423)
T ss_dssp CCEEEEETTSCHHHHHHHHHH-HHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHH
T ss_pred CCEEEECCccchHHHHHHHHH-HHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHH
Confidence 899999999999998887654 456888888765 34555 7789999999887 689999999999999999
Q ss_pred CCcEEEEEecCccccCC-CCCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEe
Q 002263 213 NGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 213 ~gal~~v~a~~~al~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~ 291 (946)
+|+++++|. ..+.+.. .....+|+|++++|.+|+. |++++|+++++++..+.+.....|. .
T Consensus 192 ~~~~li~De-a~~~~~~~~~~~~~~~di~~~s~sK~~-----g~~g~G~~~~~~~~~~~~~~~~~~~------~------ 253 (423)
T 3lvm_A 192 RGIIYHVDA-TQSVGKLPIDLSQLKVDLMSFSGHKIY-----GPKGIGALYVRRKPRVRIEAQMHGG------G------ 253 (423)
T ss_dssp HTCEEEEEC-TTTTTTSCCCTTTSCCSEEEEESTTTT-----SCSSCEEEEECBTTBCCCCCSSCSS------C------
T ss_pred cCCEEEEEh-hhhcCCCCcChhhcCCCEEEechHHhc-----CCCCeEEEEEeccccCCCCccccCC------c------
Confidence 999999953 4455544 2346789999999983342 3445899999988776664332220 0
Q ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---CcCeEEE
Q 002263 292 MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFDTVKV 368 (946)
Q Consensus 292 l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~~~~~i 368 (946)
+..++..+|.|. ....++.+++ .++ .+.++++.++..++.+++++.|+++.++++.... ....+.+
T Consensus 254 -----~~~~~~~~~~~~---~~~~a~~~al--~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 322 (423)
T 3lvm_A 254 -----HERGMRSGTLPV---HQIVGMGEAY--RIA-KEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNV 322 (423)
T ss_dssp -----TTTTTCCSCCCH---HHHHHHHHHH--HHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEE
T ss_pred -----ccccccCCCCCH---HHHHHHHHHH--HHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEE
Confidence 111223455554 3333443443 222 2237889999999999999999998338887432 1234555
Q ss_pred ecCC--HHHHHHHHHHcCCeeeee-----------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 369 KCAD--AHAIASAAYKIEMNLRVV-----------------------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 369 ~~~~--~~~v~~~L~~~GI~~~~~-----------------------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+++ ..++.+.|.+ |.++.- .++.+|++++..+|++|+++++++|..
T Consensus 323 ~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~ 394 (423)
T 3lvm_A 323 SFNYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRK 394 (423)
T ss_dssp EETTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHH
Confidence 5554 7788888876 544321 037899999999999999999999974
No 70
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.85 E-value=5.6e-19 Score=199.93 Aligned_cols=288 Identities=15% Similarity=0.132 Sum_probs=205.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 96 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~-~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
+..+.+.++++.+++++|.++.++.+++|+|.+++.++.++... .++||+|+++...|+++...+... +..|++++.+
T Consensus 41 ~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~~g~~~~~v 119 (384)
T 1eg5_A 41 EANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYL-SMKGFKVKYV 119 (384)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHH-HHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHH-HhcCCEEEEE
Confidence 44566778999999999998888999999998888877665420 127899999999999988877532 2368888887
Q ss_pred cc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCC--cEEEEEecCccccCCC-CCCCccceEEE
Q 002263 175 DL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--VKVVMATDLLALTILK-PPGELGADIVV 241 (946)
Q Consensus 175 ~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~g--al~~v~a~~~al~~l~-~~~~~GaDi~v 241 (946)
+. ++|++ +++++++|++++| |.+|.+.|+++|.++|+++| +++++|. ..+++... +..++++|+++
T Consensus 120 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~De-a~~~~~~~~~~~~~~~di~~ 198 (384)
T 1eg5_A 120 PVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDA-VQTIGKIPFSLEKLEVDYAS 198 (384)
T ss_dssp CBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEEC-TTTTTTSCCCCTTTCCSEEE
T ss_pred ccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEh-hhhcCCcccCchhcCCCEEE
Confidence 65 34555 7778999999988 67999999999999999999 9999943 33444332 33457899999
Q ss_pred ecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 242 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 242 ~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
+|. |.++ .||+|++++++++ .+...+.+ +. +..+...++.|. ....++.++
T Consensus 199 ~s~sK~~g------~~G~G~~~~~~~~--~~~~~~~~------~~-----------~~~~~~~~~~~~---~~~~a~~~a 250 (384)
T 1eg5_A 199 FSAHKFHG------PKGVGITYIRKGV--PIRPLIHG------GG-----------QERGLRSGTQNV---PGIVGAARA 250 (384)
T ss_dssp EEGGGGTS------CTTCEEEEECTTS--CCCCSBCS------SC-----------TTTTTBCSCCCH---HHHHHHHHH
T ss_pred ecHHHhcC------CCceEEEEEcCCC--cccccccc------Cc-----------ccccccCCCCCh---HHHHHHHHH
Confidence 998 6432 2347999998875 12111111 00 001122334443 222233333
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---CcCeEEEecCC--HHHHHHHHHHcCCeeeeec----
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD---- 391 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~---- 391 (946)
+ .. ..++++++.++..++++++.+.|++.| +++...+ ....+.+..++ ..++.+.|.++||.++...
T Consensus 251 l--~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~ 326 (384)
T 1eg5_A 251 M--EI-AVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTS 326 (384)
T ss_dssp H--HH-HHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------
T ss_pred H--HH-HHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccC
Confidence 3 22 235688899999999999999999877 8886432 22345555554 7889999999999876410
Q ss_pred -------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 -------------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 -------------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+|++++.++|++|+++++++|..
T Consensus 327 ~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 371 (384)
T 1eg5_A 327 KDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEE 371 (384)
T ss_dssp ------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 26799999999999999999999973
No 71
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.85 E-value=1.4e-19 Score=205.88 Aligned_cols=319 Identities=13% Similarity=0.050 Sum_probs=217.4
Q ss_pred CCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCE
Q 002263 66 THVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKT 145 (946)
Q Consensus 66 ~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~ 145 (946)
...|+.+.+.+.+.. .. +.+ .+..+.+.++++.+++++|.++.++.+++|+|.+++.++.++ +. +||+
T Consensus 18 ~~~~~~v~~a~~~~~---~~-~~~-----~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~-~~--~gd~ 85 (392)
T 2z9v_A 18 VNAYPEVLRGLGRTV---LY-DYD-----PAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASL-IS--PDDV 85 (392)
T ss_dssp CCCCHHHHHHTTSCC---CC-TTS-----HHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHH-CC--TTCC
T ss_pred cCCCHHHHHHHhccc---cc-ccc-----HHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHh-cC--CCCE
Confidence 357777766655422 21 111 233456778899999999998778889999998888777665 33 7899
Q ss_pred EEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-c--CCCEeEEEEEcC-CCceeecchHHHHHHHHhC
Q 002263 146 FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-K--SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN 213 (946)
Q Consensus 146 vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i--~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~ 213 (946)
|+++...|+++. +...++..|++++.++. +++++ + ++++++|++++| |.+|.+.|+++|.++|+++
T Consensus 86 Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 163 (392)
T 2z9v_A 86 VLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAH 163 (392)
T ss_dssp EEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHT
T ss_pred EEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHc
Confidence 999999999873 22223335777776654 34555 5 468899999988 6799999999999999999
Q ss_pred CcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEe
Q 002263 214 GVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 214 gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~ 291 (946)
|+++++|. ..+++... +..++|+|++++|. |+++ |+||+|++++++++++++.....| .+. +.+.
T Consensus 164 ~~~li~D~-a~~~g~~~~~~~~~~~d~~~~s~sK~~~-----~~~g~G~l~~~~~~~~~l~~~~~g-----~~~--~~~~ 230 (392)
T 2z9v_A 164 GAYLIVDA-VSSFGGMKTHPEDCKADIYVTGPNKCLG-----APPGLTMMGVSERAWAKMKANPLA-----PRA--SMLS 230 (392)
T ss_dssp TCEEEEEC-TTTBTTBSCCGGGGTCSEEEECSSSTTC-----CCSCCEEEEECHHHHHHHHTCTTS-----CCS--STTC
T ss_pred CCeEEEEc-ccccCCcccccccccceEEEecCccccc-----CCCceeEEEECHHHHHHhhhccCC-----CCc--eecc
Confidence 99999953 44544332 23457899999998 6674 345679999999877655211100 000 0000
Q ss_pred cc--ccc-ccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CC---CcC
Q 002263 292 MQ--TRE-QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP---FFD 364 (946)
Q Consensus 292 l~--tre-~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~---~~~ 364 (946)
+. ... +..++..+|.|+. ...++.+++ .++...|++++.++..++++++++.|+++| +++.. .. ...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~---~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~ 304 (392)
T 2z9v_A 231 IVDWENAWSRDKPFPFTPSVS---EINGLDVAL--DLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPT 304 (392)
T ss_dssp SGGGTTTTSTTSCCSSCCCHH---HHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTT
T ss_pred HHHHHhhhcccCCCCCCCCHH---HHHHHHHHH--HHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCc
Confidence 00 000 1122334555552 333444443 444455788999999999999999999886 87765 21 233
Q ss_pred eEEEecC-C--HHHHHHHHHHc-CCeeeee----cCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 002263 365 TVKVKCA-D--AHAIASAAYKI-EMNLRVV----DSNTVTASFDE-TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 365 ~~~i~~~-~--~~~v~~~L~~~-GI~~~~~----~~~~lris~~~-~~t~edid~ll~~l~~ 417 (946)
.+.+.++ + ..++.++|.++ ||.++.. .++.+|+++.. ++|++|+++++++|..
T Consensus 305 ~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~ 366 (392)
T 2z9v_A 305 TTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGG 366 (392)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHH
Confidence 4566664 2 78899999987 9988653 35789999655 8999999999999963
No 72
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.85 E-value=9.2e-20 Score=208.60 Aligned_cols=309 Identities=16% Similarity=0.102 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH----HcCCEEE
Q 002263 519 QEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIV 593 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~----~~G~~vv 593 (946)
.+...++++++++++|.+... +..++|+++...+ ++.+. +...++++|+++...|+++..... ..|++++
T Consensus 68 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~---~~~l~--~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~ 142 (406)
T 3cai_A 68 AAVLDAAREAVADLVNADPGGVVLGADRAVLLSLL---AEASS--SRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVK 142 (406)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHH---HHHTG--GGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHH---HHHHh--hccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEE
Confidence 456778999999999997433 3445555444333 33220 001246889999988877655433 2799999
Q ss_pred EEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 594 SVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 594 ~v~~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
.++++ +++.+|+++|+++++ +++++|++++|+ .+|.+. ++++|.++|+++|+++++|+++..+... .....+|
T Consensus 143 ~v~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~~ 217 (406)
T 3cai_A 143 WAEVDIETGELPTWQWESLIS---KSTRLVAVNSASGTLGGVT-DLRAMTKLVHDVGALVVVDHSAAAPYRL-LDIRETD 217 (406)
T ss_dssp EECCCTTTCCCCGGGHHHHCC---TTEEEEEEESBCTTTCBBC-CCHHHHHHHHHTTCEEEEECTTTTTTCC-CCHHHHC
T ss_pred EEecCcccCCcCHHHHHHHhC---CCceEEEEeCCcCCccccC-CHHHHHHHHHHcCCEEEEEcccccCCCC-CCchhcC
Confidence 99998 678999999999996 789999999994 689998 7999999999999999999987532111 1123468
Q ss_pred CCEEEeCCCcccccCCCCCCCcce-eEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G-~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
.|++++++||+|+ |++| ++++++++.+.+.........+. .+....++.+.. ....+..+..++..
T Consensus 218 ~d~~~~s~~K~~g-------~~~G~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~t~~~~-----~~~a~~~al~~~~~ 284 (406)
T 3cai_A 218 ADVVTVNAHAWGG-------PPIGAMVFRDPSVMNSFGSVSTNPYATG-PARLEIGVHQFG-----LLAGVVASIEYLAA 284 (406)
T ss_dssp CSEEEEEGGGGTS-------CSCEEEEESCHHHHHTSCCCCSCTTCCG-GGGGCCSCCCHH-----HHHHHHHHHHHHHT
T ss_pred CCEEEeehhhhcC-------CCcCeEEEEehHHHhhcCCcccCCCCCc-cccccCCCccHH-----HHHHHHHHHHHHHH
Confidence 9999999999762 4578 99998876554432110000000 000001111110 00011122233222
Q ss_pred HcH-----------hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 751 MGS-----------KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 751 lG~-----------eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
.|. +++.+..++...+++++.+.|++...+...++.......+.+.++ +.+..++.++|.++|
T Consensus 285 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~g 358 (406)
T 3cai_A 285 LDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVH------KVPADRVVQRLADNG 358 (406)
T ss_dssp SSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEET------TBCHHHHHHHHHHTT
T ss_pred hccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEEC------CcCHHHHHHHHHHCC
Confidence 221 136667777778899999999874233221211111122445443 356889999999999
Q ss_pred cccCCCC---------CC-CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 820 FHGPTMS---------WP-VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 820 i~~~~~~---------~p-~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
|.+.... .+ ..+.+||++...+|++|+++++++|+++
T Consensus 359 i~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 359 ILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp EECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred cEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 9874322 11 1378999999989999999999998753
No 73
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.84 E-value=5.1e-20 Score=209.42 Aligned_cols=312 Identities=14% Similarity=0.086 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcC--CEEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCG--MKIV 593 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G--~~vv 593 (946)
..+++.++++.+++++|.+...+++++|+.+..+++ +.+ .++++||++...|..+. ..+...| .+++
T Consensus 33 ~~~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~---~~~------~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~ 103 (379)
T 3ke3_A 33 FQEVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVA---RQL------TIDEDCLIIRNGWFSYRWTQILEKGKFAKSST 103 (379)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH---HHH------CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHH---HhC------CCCCeEEEEeCCchhHHHHHHHHHhCCCCceE
Confidence 457888999999999999855566678887765433 322 14678988776553332 1244455 5888
Q ss_pred EEcCCCC---------CCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEecccccc
Q 002263 594 SVGTDAK---------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNA 660 (946)
Q Consensus 594 ~v~~~~~---------g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a 660 (946)
.++.+.+ +.+|++++++++++ +++++|+++++ |.+|.+. | +++|+++||++|+++++|+++.
T Consensus 104 ~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~~~G~~~-~~~~l~~i~~~~~~~~~~li~D~~~~-- 178 (379)
T 3ke3_A 104 VLTAERTEDTEAPKPFAPVDIETAVAKIKE--DKSAIVYAPHVETSSGIIL-SEEYIKALSEAVHSVGGLLVIDCIAS-- 178 (379)
T ss_dssp EEECEESSCCSSCCCEECCCHHHHHHHHHH--HTCSEEEEESEETTTTEEC-CHHHHHHHHHHHHHTTCEEEEECTTC--
T ss_pred EEeccccccccccCCCCCCCHHHHHHHHhh--cCCcEEEEEeecCCCceeC-CHHHHHHHHHHHHHcCCEEEEEeccc--
Confidence 8887542 36899999999963 36777888876 5689987 7 9999999999999999999864
Q ss_pred cccc-cCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC-CccccCCCCCCC-----CCCCCCCCc-cc
Q 002263 661 QVGL-TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPAP-----EKSQPLGTI-AA 732 (946)
Q Consensus 661 ~~gl-~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~-~~v~~~~d~~~~-----~~~~~~~~i-~~ 732 (946)
++. .....+|+|++++++||+|+ |++|+|++++++++.+.+.. .......+...+ ..+...... .+
T Consensus 179 -g~~~~~~~~~~~d~~~~s~~K~l~-----~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t 252 (379)
T 3ke3_A 179 -GCVWLDMKELGIDVLISAPQKGWS-----STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHAT 252 (379)
T ss_dssp -TTCCCCHHHHTCSEEEECTTTTTC-----SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSC
T ss_pred -CCccccccccCCCEEEecchhhcC-----CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCC
Confidence 222 12235699999999999984 44689999999876544321 100000000000 000000000 01
Q ss_pred CccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCcee-eeEEEecccccccCCCCHHH
Q 002263 733 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVA-HEFIVDLRGLKNTAGIEPED 810 (946)
Q Consensus 733 ~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~-~e~v~~~~~~~~~~g~~~~~ 810 (946)
. +...+.+..+.+..+..+|+.++.++...++++++++|++. +.+..+ .+... +...+... + ....
T Consensus 253 ~---~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~--~~~~~~~i~~~~~~------~-~~~~ 320 (379)
T 3ke3_A 253 M---PTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAA--EGFEAPGVVVSYTE------R-DDMH 320 (379)
T ss_dssp C---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBC--TTCBCSSEEEEECS------C-HHHH
T ss_pred C---CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCC--ccccCceEEEEccC------C-cchH
Confidence 1 12222333455666777788888888889999999999875 554322 11111 11223221 1 1122
Q ss_pred HHHHHHHCCcccCCCCC-----CC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHGPTMSW-----PV-PGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 811 i~~~L~~~Gi~~~~~~~-----p~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+.+.|.++||.+..... |. .+.+||+++..+|++|||+++++|+++++++.
T Consensus 321 ~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 321 KGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp SSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 36788899998643221 21 57899999999999999999999999987764
No 74
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.84 E-value=1.3e-19 Score=202.46 Aligned_cols=317 Identities=14% Similarity=0.089 Sum_probs=217.0
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC--CcceEEcccHHHHHHHHHHHh
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~--~~~~sl~~~~Ta~~ea~~la~ 136 (946)
++.|. ...|+.+.+.+.+... . + +.+ ...+...++++.+++++|.+ ..++.+++|+|.+++.++.++
T Consensus 4 ~~~gp--~~~~~~v~~a~~~~~~---~-~-~~~----~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~ 72 (353)
T 2yrr_A 4 LTPGP--TPIPERVQKALLRPMR---G-H-LDP----EVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANL 72 (353)
T ss_dssp CSSSS--CCCCHHHHGGGGSCCC---C-T-TCH----HHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTC
T ss_pred CCCCC--CCCCHHHHHHHhcccc---c-c-cCH----HHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHh
Confidence 45664 4577887766554322 1 1 112 23456778899999999996 567888899997777665544
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceeecchHH
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGD 205 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~ 205 (946)
. + |+|+++...|+++ .+...++..|++++.++. +++++ +++ ++++|++++| |.+|.+.|+++
T Consensus 73 ~----~-d~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~ 145 (353)
T 2yrr_A 73 D----R-GPVLVLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEA 145 (353)
T ss_dssp S----C-CCEEEEECSHHHH--HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHH
T ss_pred c----C-CcEEEEcCCCchH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHH
Confidence 2 3 8899999999986 233334456888877664 34555 555 7899999988 67999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCC
Q 002263 206 FIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSS 283 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~ 283 (946)
|.++|+++|+++++|. ..+++... +..++|+|++++|+ |++++ +||+|++++++++++++.. ..+
T Consensus 146 i~~l~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-----~~g~G~~~~~~~~~~~l~~-~~~------ 212 (353)
T 2yrr_A 146 IGALAKEAGALFFLDA-VTTLGMLPFSMRAMGVDYAFTGSQKCLSA-----PPGLAPIAASLEARKAFTG-KRG------ 212 (353)
T ss_dssp HHHHHHHHTCEEEEEC-TTTTTTSCCCHHHHTCSEEECCTTSTTCC-----CSSCEEEEECHHHHHHCCC-CSC------
T ss_pred HHHHHHHcCCeEEEEc-CcccccccccccccCceEEEecCcccccC-----CCceEEEEECHHHHHHhcc-CCC------
Confidence 9999999999999953 33444332 22456899999998 66743 3567999999998877731 000
Q ss_pred CCcceEEeccc--ccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC
Q 002263 284 GKPALRVAMQT--REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 361 (946)
Q Consensus 284 g~~~~~l~l~t--re~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~ 361 (946)
+.+.... ..+..++..+|.|.. ...++.+++ .++...|++++.++..++++++++.|+++| +++..+.
T Consensus 213 ----~~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~ 282 (353)
T 2yrr_A 213 ----WYLDLARVAEHWERGGYHHTTPVL---LHYALLEAL--DLVLEEGVAARERRAREVYAWVLEELKARG-FRPYPKA 282 (353)
T ss_dssp ----STTCHHHHHHHHTTCCCSSCCCHH---HHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CEESCSS
T ss_pred ----ccccHHHHhhhhhcCCCCCCCCHH---HHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CccccCc
Confidence 1000000 001012334555542 333344443 445556788999999999999999999986 8887532
Q ss_pred --CcCeEEEecC-C--HHHHHHHHHHcCCeeeee----cCCeEEEEeccCCCHHHHH-HHHHHHh
Q 002263 362 --FFDTVKVKCA-D--AHAIASAAYKIEMNLRVV----DSNTVTASFDETTTLEDVD-KLFIVFA 416 (946)
Q Consensus 362 --~~~~~~i~~~-~--~~~v~~~L~~~GI~~~~~----~~~~lris~~~~~t~edid-~ll~~l~ 416 (946)
....+.+.++ + ..++.++|.++||.++.. .++.+|+|++.+++++|++ +++++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~ 347 (353)
T 2yrr_A 283 SPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALD 347 (353)
T ss_dssp SBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHH
T ss_pred cCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHH
Confidence 1223456664 2 788999999999988642 3578999999999999999 9999886
No 75
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.84 E-value=1.2e-19 Score=204.20 Aligned_cols=315 Identities=11% Similarity=0.009 Sum_probs=208.9
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCCh----hhhhhhHHHHHHHHHHHHHHHhCCCC-cceEE-cccHHHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQ----AEIAQGRLESLLNFQTMIADLTGLPM-SNASL-LDEGTAAAEAM 132 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq----~e~sqg~l~~l~e~q~~la~L~g~~~-~~~sl-~~~~Ta~~ea~ 132 (946)
.+.| |+.+|+.|.+.+.....-+.+ +|.. ...++...+.+.++++.+++|+|++. .++.+ +.+||.+++++
T Consensus 9 f~pg--pt~~~~~V~~a~~~~~~~~~~-~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~ 85 (361)
T 3m5u_A 9 FSAG--PSTLPLEILEQAQKELCDYQG-RGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMI 85 (361)
T ss_dssp CCSS--SCCCCHHHHHHHHHTSSSGGG-SSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHH
T ss_pred ecCC--CCCCcHHHHHHHHHHHHhccc-CCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHH
Confidence 4677 567999998787753211111 1211 01234567899999999999999974 46776 78899887777
Q ss_pred HHHhccccCCCCEE--EEc-CCCCHHHHHHHHHhhcCCCeEEEEecccc-------c--cccCCCEeEEEEEcC-CCcee
Q 002263 133 AMCNNIQKGKKKTF--IIA-SNCHPQTIDICITRADGFDIKVVVSDLKD-------I--DYKSGDVCGVLVQYP-GTEGE 199 (946)
Q Consensus 133 ~la~~~~~~~gd~v--vv~-~~~Hps~~~~~~~~a~~~gi~v~~~~~~~-------l--~~i~~~t~~v~v~~p-n~~G~ 199 (946)
+..+. +++++ +++ ...|+ |...++..|+++++++.+. . + ++++|++|++++. |.+|+
T Consensus 86 ~~~~~----~~~~~~~i~~~~~~~~-----~~~~a~~~G~~v~~~~~~~~g~~~~~~~~~-l~~~t~lv~~~~~e~~tG~ 155 (361)
T 3m5u_A 86 PMNLA----LNGVCEYANTGVWTKK-----AIKEAQILGVNVKTVASSEESNFDHIPRVE-FSDNADYAYICSNNTIYGT 155 (361)
T ss_dssp HHHHC----CSSCEEEEECSHHHHH-----HHHHHHHTTCCEEEEEECTTTTSCSCCCCC-CCTTSSEEEEESEETTTTE
T ss_pred HHhcC----CCCeEEEEeCCHHHHH-----HHHHHHHcCCceEEEecccCcCCCcCChhh-cCCCCCEEEEeCCCCCcce
Confidence 66553 34543 333 23333 2223445677777765421 1 2 6678999988864 78999
Q ss_pred ecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeE
Q 002263 200 VLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 278 (946)
Q Consensus 200 i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~ 278 (946)
+.|. | ++ +|++++||+ ..+++.++ +.. ++|++++|+||+.+| ||+|++++++++++++++...+
T Consensus 156 ~~~~--i---~~-~~~~~~vD~-~q~~g~~~id~~--~~d~~~~s~~K~~gp-----~G~g~l~~~~~~~~~~~~~~~p- 220 (361)
T 3m5u_A 156 QYQN--Y---PK-TKTPLIVDA-SSDFFSRKVDFS--NIALFYGGVQKNAGI-----SGLSCIFIRKDMLERSKNKQIP- 220 (361)
T ss_dssp ECSS--C---CC-CSSCEEEEC-GGGTTSSCCCCT--TEEEEEEETTTTSSC-----TTCEEEEEEHHHHHHHHTCCCC-
T ss_pred eCCc--c---cc-cCCEEEEEc-ccccCCCCCCcc--cCCEEEEechhccCC-----CccEEEEEcHHHHhhhcCCCCC-
Confidence 9762 3 33 499999954 34565543 333 479999999555234 5689999999988776432111
Q ss_pred eecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCE-E
Q 002263 279 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTV-E 356 (946)
Q Consensus 279 s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~-~ 356 (946)
..+.+....+ .....+|+|+ .+++++.+++ .++..+ |++++.+|..+++++|+++|+++|++ +
T Consensus 221 ---------~~~~~~~~~~-~~~~~~Tp~v---~~i~~l~~al--~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~ 285 (361)
T 3m5u_A 221 ---------SMLNYLTHAE-NQSLFNTPPT---FAIYMFNLEM--DWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYK 285 (361)
T ss_dssp ---------GGGCHHHHHH-TTTCSSCCCH---HHHHHHHHHH--HHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEE
T ss_pred ---------ceeehHHHhh-cCCCCCCccH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeee
Confidence 0111111100 1122478887 5777777776 666677 89999999999999999999999655 6
Q ss_pred EcCC--CCc-CeEEEecCC----HHHHHHHHHHcCCeeeee--cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 357 VQGL--PFF-DTVKVKCAD----AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 357 ~~~~--~~~-~~~~i~~~~----~~~v~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+..+ ... ..++|++++ ..++.+.|.++||.++.- ..+.+|+|++.+||++||++++++|+
T Consensus 286 ~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~ 354 (361)
T 3m5u_A 286 GHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMK 354 (361)
T ss_dssp ESSCGGGBCSSEEEEEESSCTTHHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred ccCCHHHcCCeEEEEECCCchhhhHHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHH
Confidence 6432 122 346677653 347888999999987532 12679999999999999999999996
No 76
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.84 E-value=3.6e-20 Score=209.10 Aligned_cols=298 Identities=17% Similarity=0.178 Sum_probs=199.3
Q ss_pred HHHHHHH-HHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc--CC
Q 002263 522 FNNLGEW-LCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG--TD 598 (946)
Q Consensus 522 ~~el~~~-la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~--~~ 598 (946)
..+++++ +++++|.+ ..+..++|+++...++. .+. .++++|+++...|.++...+...|++++.++ .+
T Consensus 55 ~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~---~~~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 125 (371)
T 2e7j_A 55 IHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMH---SLA-----KKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY 125 (371)
T ss_dssp HHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHH---HHC-----CTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT
T ss_pred HHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHH---HHh-----CCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC
Confidence 5678899 99999998 43445555655544433 321 2568999999988877777889999999999 88
Q ss_pred CCCCCCHHHHHHHHHhcC--CCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 599 AKGNINIEELRKAAEANR--DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~--~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
+++.+|+++|+++++++. +++++|++++| |.+|.+. ++++|+++|+++|+++++|+++...... .....++.|++
T Consensus 126 ~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~-~~~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~di~ 203 (371)
T 2e7j_A 126 PDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP-DVKKIAKVCSEYDVPLLVNGAYAIGRMP-VSLKEIGADFI 203 (371)
T ss_dssp TTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCC-CHHHHHHHHHTTTCCEEEECTTTBTTBC-CCHHHHTCSEE
T ss_pred CCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccC-CHHHHHHHHHHcCCeEEEECccccCCCC-CChhhcCCCEE
Confidence 788999999999997542 57899999999 5789998 7999999999999999999987532211 12335689999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCC-CCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF-LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~-lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+.++||+|+ +++++|++++++++.+. +.....+...+. +...++. +...+.++.+.+..+..
T Consensus 204 ~~s~sK~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~a~~~~l~~~~~- 266 (371)
T 2e7j_A 204 VGSGHKSMA-----ASGPIGVMGMKEEWAEIVLRRSEKYKNKEV---ELLGCTA--------RGATIITLMASFPHVRE- 266 (371)
T ss_dssp EEEHHHHSS-----CCSSCEEEEECTTTTTTTTCBCSSCTTSBG---GGTTCCC--------CSHHHHHHHHHHHHHHH-
T ss_pred EecCCcCCC-----CCCCcEEEEEechhhhhhccccccCccccc---ccccCCc--------CHHHHHHHHHHHHHHHH-
Confidence 999999985 33478999999887665 532111000000 0000111 11112222233333322
Q ss_pred hHHHHHHHH--HHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC---
Q 002263 755 GLTEASKIA--ILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV--- 829 (946)
Q Consensus 755 Gl~~~~~~~--~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~--- 829 (946)
+..++. ..+++++.+.|++. .+.+.++.....+-+.++++ +..++.++|.++||.+....+..
T Consensus 267 ---~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~~~~~~~~~~~~ 334 (371)
T 2e7j_A 267 ---RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--------VLYEISKKAKGGRFFLYRELKSRKIH 334 (371)
T ss_dssp ---HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--------HHHHHHHHSSSGGGHHHHHHHHTTEE
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--------CHHHHHHHHHHCCEEEEecccccccc
Confidence 333445 57788999999875 33222221001122455542 45789999999999863211111
Q ss_pred ---CCEEE-EEcCCC-CCHHHHHHHHHHHHHHHHH
Q 002263 830 ---PGTLM-IEPTES-ESKEELDRYCDALISIREE 859 (946)
Q Consensus 830 ---~~~lr-i~~t~~-~t~~eid~~~~aL~~i~~e 859 (946)
++.+| ++++.. ++++|+++++++|++++++
T Consensus 335 g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 335 GIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp CSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 47899 999887 8999999999999988764
No 77
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.84 E-value=8.6e-19 Score=205.32 Aligned_cols=358 Identities=10% Similarity=0.015 Sum_probs=228.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCc---ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHH
Q 002263 27 MKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 103 (946)
Q Consensus 27 ~~lp~~~~~~se~e~~~~~~~l~~~n~~---~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e 103 (946)
..+| +++.+-.++++++.+....+.. ...|.|.-+.+...|+.+.+.+.+ .+-..-..| +.+.+..+.-.+
T Consensus 44 ~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~--~~n~~~~~~--~~~p~~~~lE~~ 117 (475)
T 3k40_A 44 DAAP--EKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSG--AIACIGFTW--IASPACTELEVV 117 (475)
T ss_dssp SSCC--SSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSSCCCCCHHHHHHHHHHH--HHCCCSSSC--CCCHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHHhccCCCCCCcCceeeCCCCCcHHHHHHHHHHH--HhCccccCc--cCCcHHHHHHHH
Confidence 3566 6789999999999987544322 234666655555566666543332 111111122 245566667777
Q ss_pred HHHHHHHHhCCCCc---------ceEEcccHHHHHHHHHHHhcccc-------C---------CCCEEEEcCCCCHHHHH
Q 002263 104 FQTMIADLTGLPMS---------NASLLDEGTAAAEAMAMCNNIQK-------G---------KKKTFIIASNCHPQTID 158 (946)
Q Consensus 104 ~q~~la~L~g~~~~---------~~sl~~~~Ta~~ea~~la~~~~~-------~---------~gd~vvv~~~~Hps~~~ 158 (946)
...++++++|++.. ...++++||.+....+++.+... + ++++|+++...|+++.+
T Consensus 118 v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~ 197 (475)
T 3k40_A 118 MMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVER 197 (475)
T ss_dssp HHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHH
T ss_pred HHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHH
Confidence 78899999999864 47788999876655444432110 1 24689999999999998
Q ss_pred HHHHhhcCCCeEEEEecc-------ccccc-cCCC------EeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecC
Q 002263 159 ICITRADGFDIKVVVSDL-------KDIDY-KSGD------VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDL 223 (946)
Q Consensus 159 ~~~~~a~~~gi~v~~~~~-------~~l~~-i~~~------t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~ 223 (946)
.++. .|++++.++. ++|++ +.++ +++|+++.+ |.+|.++|+++|+++||++|++++|++ .
T Consensus 198 ~~~~----~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~-A 272 (475)
T 3k40_A 198 AGLL----GGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDA-A 272 (475)
T ss_dssp HHHH----HTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEEC-T
T ss_pred HHHH----cCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeH-H
Confidence 8753 4778888765 34555 5332 677888887 569999999999999999999999954 2
Q ss_pred ccccCCCCC-------CCccceEEEecc-ccccccCCCCCCceEEEEEchh-hh-hcC---CCceEeEeecCCCCcceEE
Q 002263 224 LALTILKPP-------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YK-RMM---PGRIVGVSIDSSGKPALRV 290 (946)
Q Consensus 224 ~al~~l~~~-------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~-~~l---p~~~~G~s~d~~g~~~~~l 290 (946)
++.+.+..+ +--++|.+++++ |+|+.|. +.|+++++++ .+ +.+ ++.+.+ +..+. ..
T Consensus 273 ~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~-----g~g~l~~~~~~~l~~~~~~~~~yl~~---~~~~~---~~ 341 (475)
T 3k40_A 273 YAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNF-----DCSAMWLKDPSWVVNAFNVDPLYLKH---DMQGS---AP 341 (475)
T ss_dssp TGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS-----SCEEEEESSGGGC--------------------------
T ss_pred hHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCC-----ceEEEEEeCHHHHHHHhcCCccccCC---CcCCC---CC
Confidence 333322111 112479999999 6677664 4677888864 32 222 111111 00000 00
Q ss_pred ecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEec
Q 002263 291 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC 370 (946)
Q Consensus 291 ~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~ 370 (946)
+. . +...+.++. ...+++.+++ .++|.+|++++.++.++++++++++|+++++++++.++....+.|+.
T Consensus 342 ~~--~--~~~~~~sr~-----~~~l~l~~al--~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~ 410 (475)
T 3k40_A 342 DY--R--HWQIPLGRR-----FRALKLWFVL--RLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRL 410 (475)
T ss_dssp -----------CCCGG-----GTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEE
T ss_pred Cc--c--cccccCCCc-----ccHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEe
Confidence 00 0 000011111 0112333333 67789999999999999999999999998449998766667778876
Q ss_pred CC----HHHHHHHHHHcCCe-eeee--c-CCeEEEEecc-CCCHHHHHHHHHHHhC
Q 002263 371 AD----AHAIASAAYKIEMN-LRVV--D-SNTVTASFDE-TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 ~~----~~~v~~~L~~~GI~-~~~~--~-~~~lris~~~-~~t~edid~ll~~l~~ 417 (946)
++ ..++.++|.++|+. +... . ...+|++++. .+|++||++++++|..
T Consensus 411 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~ 466 (475)
T 3k40_A 411 KGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSA 466 (475)
T ss_dssp SSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 43 57899999988774 3321 1 3579999875 4689999999999974
No 78
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.84 E-value=1.1e-18 Score=204.92 Aligned_cols=357 Identities=10% Similarity=0.026 Sum_probs=230.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCc---ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 104 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~---~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~ 104 (946)
.+| +++.+..++++++.++...+.. ..+|.|.-+.+...|+.+.+.+.+ .+-.....| +.+.+..+.-.+.
T Consensus 50 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~--~~~p~~~~lE~~v 123 (481)
T 4e1o_A 50 SAP--EDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLAD--AINCLGFTW--ASSPACTELEMNV 123 (481)
T ss_dssp SCC--SSCCCHHHHHHHHHHHTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHH--HHCCCCSST--TTCHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCCHHHHHHHHHHH--HhCcccCCc--CCCcHHHHHHHHH
Confidence 466 6789999999999997554422 224555544444566666543332 111111222 3456667777788
Q ss_pred HHHHHHHhCCCCc----------ceEEcccHHHHHHHHHHHhcccc----------------CCCCEEEEcCCCCHHHHH
Q 002263 105 QTMIADLTGLPMS----------NASLLDEGTAAAEAMAMCNNIQK----------------GKKKTFIIASNCHPQTID 158 (946)
Q Consensus 105 q~~la~L~g~~~~----------~~sl~~~~Ta~~ea~~la~~~~~----------------~~gd~vvv~~~~Hps~~~ 158 (946)
.+++++++|++.. ...+++|||.+....+++.+... .++++|++++..|.++.+
T Consensus 124 ~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 203 (481)
T 4e1o_A 124 MDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEK 203 (481)
T ss_dssp HHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHH
T ss_pred HHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHH
Confidence 8899999999864 45678899977665555443110 146789999999999998
Q ss_pred HHHHhhcCCCeEEEEecc--------ccccc-cCCC------EeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEec
Q 002263 159 ICITRADGFDIKVVVSDL--------KDIDY-KSGD------VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATD 222 (946)
Q Consensus 159 ~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~------t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~ 222 (946)
.++. .|++++.++. ++|++ ++++ +++|+++.+ |.+|.++|+++|+++||++|++++|++
T Consensus 204 ~~~~----~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDa- 278 (481)
T 4e1o_A 204 AGLI----SLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDA- 278 (481)
T ss_dssp HHHH----HTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEC-
T ss_pred HHHh----CCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeeh-
Confidence 8753 3778888765 34555 5332 677888887 568999999999999999999999954
Q ss_pred CccccCCCCC----CCcc---ceEEEecc-ccccccCCCCCCceEEEEEchh-hh-hcCC---CceEeEeecCCCCcceE
Q 002263 223 LLALTILKPP----GELG---ADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YK-RMMP---GRIVGVSIDSSGKPALR 289 (946)
Q Consensus 223 ~~al~~l~~~----~~~G---aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~-~~lp---~~~~G~s~d~~g~~~~~ 289 (946)
.++.+.+..+ ...| +|.++.++ |+|++|. +.|+++++++ .+ +.+. +.+.. ....+...+
T Consensus 279 A~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-----g~g~l~~~~~~~l~~~~~~~~~yl~~--~~~~~~~~~- 350 (481)
T 4e1o_A 279 AYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHF-----DCTGFWVKDKYKLQQTFSVNPIYLRH--ANSGVATDF- 350 (481)
T ss_dssp TTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS-----SCEEEEESBHHHHHTTTCCCCGGGCC--TTTTTSCCG-
T ss_pred hhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCC-----ceEEEEEeCHHHHHHHhcCCchhccC--cccCCCCCc-
Confidence 2233222111 1124 59999999 7787774 3677888764 32 2221 11100 000000000
Q ss_pred EecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEe
Q 002263 290 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK 369 (946)
Q Consensus 290 l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~ 369 (946)
. +..-+.++ +. ..+++.+++ ..+|.+|++++.++..++++++++.|+++++++++.++....+.|+
T Consensus 351 -----~--~~~~~~~r-~~----~~l~~~~al--~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~ 416 (481)
T 4e1o_A 351 -----M--HWQIPLSR-RF----RSVKLWFVI--RSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFR 416 (481)
T ss_dssp -----G--GGSSSSCC-CC----THHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEE
T ss_pred -----c--cccccCCC-Cc----cHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEE
Confidence 0 00001111 11 112333333 6678999999999999999999999999834999876666777777
Q ss_pred cCC----HHHHHHHHHHcCC-eeeee--c-CCeEEEEeccC-CCHHHHHHHHHHHhC
Q 002263 370 CAD----AHAIASAAYKIEM-NLRVV--D-SNTVTASFDET-TTLEDVDKLFIVFAG 417 (946)
Q Consensus 370 ~~~----~~~v~~~L~~~GI-~~~~~--~-~~~lris~~~~-~t~edid~ll~~l~~ 417 (946)
.++ ..++.++|.++|+ .+... . ...+|++++.. +|++||++++++|..
T Consensus 417 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~ 473 (481)
T 4e1o_A 417 LKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRD 473 (481)
T ss_dssp ESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred eCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 643 5789999998885 44322 1 35799998865 589999999999974
No 79
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.84 E-value=4.4e-20 Score=206.34 Aligned_cols=308 Identities=16% Similarity=0.162 Sum_probs=202.7
Q ss_pred HHHHHHHHhhCCCcc----cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH--------HHHHcC--
Q 002263 524 NLGEWLCTITGFDSF----SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--------TAAMCG-- 589 (946)
Q Consensus 524 el~~~la~l~G~~~~----~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~--------~a~~~G-- 589 (946)
-.++..+++||.+.. ++||.||+++++++++|+. .++|+|+..+..||-|.. .....|
T Consensus 104 la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All--------~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~ 175 (490)
T 3ou5_A 104 LCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL--------QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIF 175 (490)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC--------C-CCCEECBC------------------------
T ss_pred HHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHc--------CCCCEEEecccCCCCcccccccCCCccccccccc
Confidence 345678899999864 8999999999988877764 356889987777775532 112223
Q ss_pred CEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccc---cccc
Q 002263 590 MKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLT 665 (946)
Q Consensus 590 ~~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~---~gl~ 665 (946)
++++..++|+ ++.+|.+.++++..+++++ +|++-...+.-.+ |++++++||++.|+.+++|.||..++ +.+.
T Consensus 176 ~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPk--lIi~G~SaY~r~i--d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p 251 (490)
T 3ou5_A 176 FESMPYKLNPKTGLIDYNQLALTARLFRPR--LIIAGTSAYARLI--DYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp ----CBCEETTTTEECHHHHHHHHHHHCCS--EEEECCSSCCSCC--CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC
T ss_pred ccccccccCCCCCcccHHHHHHHHhhcCCC--eEEECCccCcccc--CHHHHHHHHhhcccEEEechhhhhhhhcccccC
Confidence 3555566664 5899999999999986665 4666554444444 69999999999999999999996444 3356
Q ss_pred CCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC--CccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 666 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 666 ~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~--~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
.|-.. +||++.+.|||| +||..|+|.+++.....-+. .-.. .++.+.-...-++.+.+.|. ...+++.
T Consensus 252 sP~~~-ADvVTtTTHKTL------rGPrGG~Il~~~~~~~~~~k~~~~~~--~~~~kkin~aVFPg~qggp~-~h~IAAk 321 (490)
T 3ou5_A 252 SPFKH-ADIVTTTTHKTL------RGARSGLIFYRKGVKAVDPKTGREIP--YTFEDRINFAVFPSLQGGPH-NHAIAAV 321 (490)
T ss_dssp CGGGT-CSEEEEESSSTT------CSCSCEEEEEECSEEEECC--CCEEE--CCCHHHHHHHHTTTTCSSCC-HHHHHHH
T ss_pred Ccccc-ceEEeccccccc------cCCCceEEEeccccccccccccchhH--HHHHHHHHhhcCccccccch-HHHHHHH
Confidence 67665 899999999998 68999999999753221110 0000 00000000000111111121 1234556
Q ss_pred HHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 744 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 744 a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
|.++...+.++ +++.+++.+.||+.|++.|.+. |.++.. ++..|.+++|+++ .|++..+..+.|.+.||.+
T Consensus 322 AVaf~Ea~~p~-fk~Ya~qVv~NAkaLA~~L~~~G~~vvsG---gTdnHlvLvDl~~----~g~tG~~ae~~Le~agItv 393 (490)
T 3ou5_A 322 AVALKQACTPM-FREYSLQVLKNARAMADALLERGYSLVSG---GTDNHLVLVDLRP----KGLDGARAERVLELVSITA 393 (490)
T ss_dssp HHHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHHTTCEEGGG---SCSSSEEEEECGG----GTCCHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHhHh-HHHHHHHHHHHHHHHHHHHHhCCCeeecC---CCCceEEEEeccc----cCCCHHHHHHHHHHcCcEE
Confidence 66666666655 6788999999999999999875 888643 3556888999874 3788999999999999987
Q ss_pred CC--CCC---C-CCCEEEEEcCCCC----CHHHHHHHHHHHHHHHHHHH
Q 002263 823 PT--MSW---P-VPGTLMIEPTESE----SKEELDRYCDALISIREEIA 861 (946)
Q Consensus 823 ~~--~~~---p-~~~~lri~~t~~~----t~~eid~~~~aL~~i~~e~~ 861 (946)
.. +.+ | +++.|||...+.+ .++|++++.+.|.+++....
T Consensus 394 NkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~~~~ 442 (490)
T 3ou5_A 394 NKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGL 442 (490)
T ss_dssp EEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHHhhh
Confidence 42 211 2 4678999987653 46889988888888775433
No 80
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.84 E-value=2.4e-19 Score=210.48 Aligned_cols=314 Identities=16% Similarity=0.153 Sum_probs=205.2
Q ss_pred cHHHHHHHHHHHHHHhhCCCc----ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH--------H
Q 002263 517 GYQEMFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--------T 584 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~----~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~--------~ 584 (946)
+..+++.++++++++++|.+. .++++++|+++++++++++. .++|+||+++..|+.+.. .
T Consensus 87 ~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all--------~pGD~Vl~~~~~~~~~~~~~~~~~~~~ 158 (483)
T 1rv3_A 87 HIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALV--------EPHGRIMGLDLPDGGHLTHGFMTDKKK 158 (483)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHT--------CTTCEEEEECGGGTCCGGGCCBCSSCB
T ss_pred hHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhc--------CCCCEEEEecCccCcCcchhhhhcccC
Confidence 345667778899999999985 35888999866654444431 256899999988888753 2
Q ss_pred HHHcC--CEEEEEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccc
Q 002263 585 AAMCG--MKIVSVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 585 a~~~G--~~vv~v~~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~ 661 (946)
+.+.| ++++.++++ +++.+|+++|++++++ ++|++|++ +++..+.+. |+++|+++|+++|+++++|++|..++
T Consensus 159 v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~--~~tklIi~-~~sn~~~~~-dl~~i~~ia~~~g~~livD~ah~~g~ 234 (483)
T 1rv3_A 159 ISATSIFFESMAYKVNPDTGYIDYDRLEENARL--FHPKLIIA-GTSCYSRNL-DYGRLRKIADENGAYLMADMAHISGL 234 (483)
T ss_dssp CSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH--HCCSEEEE-CCSSCCSCC-CHHHHHHHHHHTTCEEEEECTTTHHH
T ss_pred cccccceEEEEECccccCCCcCCHHHHHHHHhh--cCCcEEEE-eCCcCCCcC-CHHHHHHHHHHcCCEEEEEccchhcc
Confidence 33445 566666666 5689999999999974 46778888 554333666 79999999999999999999975333
Q ss_pred c--cc-cCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCC-CC-CCCCcccCccc
Q 002263 662 V--GL-TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEK-SQ-PLGTIAAAPWG 736 (946)
Q Consensus 662 ~--gl-~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~-~~-~~~~i~~~~~g 736 (946)
. +. ..|.. ++|++++++||+| +||..|++++++.+.. +. ...|....+..... .. ......+.+
T Consensus 235 ~~~~~~~~p~~-~~div~~s~~K~l------~GprgG~i~~~~~~~~-~~-~~~g~~~~y~~~~~~~~~~~~~~~g~~-- 303 (483)
T 1rv3_A 235 VVAGVVPSPFE-HCHVVTTTTHKTL------RGCRAGMIFYRRGVRS-VD-PKTGKEILYNLESLINSAVFPGLQGGP-- 303 (483)
T ss_dssp HHHTSSCCGGG-TCSEEEEESSGGG------CCCSCEEEEEECSBCC---------CCBCCHHHHHHHHHTTTTCCSC--
T ss_pred cccCCCCCCCC-CCcEEEecCcccC------CCCCceEEEEcchhhh-hc-cccCcchhhHHHHHhhhhcCCcccCCc--
Confidence 2 11 12211 7899999999998 3576699999986542 21 00000000000000 00 000001111
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
....+++..+.+..+..+++++..++...++++|.+.|++. +.+..++ ...|-++++++. .+.+..++.+.|
T Consensus 304 ~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~v~~~~----~g~~~~~~~~~L 376 (483)
T 1rv3_A 304 HNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGG---SDNHLILVDLRS----KGTDGGRAEKVL 376 (483)
T ss_dssp CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSSEEEEEGGG----GTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCC---CCCceEEEeccC----CCCCHHHHHHHH
Confidence 11111222234455555678888888999999999999875 5443222 122446777753 256888999999
Q ss_pred HHCCcccC----CCC-CC-CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHH
Q 002263 816 MDYGFHGP----TMS-WP-VPGTLMIEPTESES----KEELDRYCDALISIREEI 860 (946)
Q Consensus 816 ~~~Gi~~~----~~~-~p-~~~~lri~~t~~~t----~~eid~~~~aL~~i~~e~ 860 (946)
.+.||.+. ... .+ ..+.+||+++..+| ++|++++++.|.++++..
T Consensus 377 ~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~~ 431 (483)
T 1rv3_A 377 EACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELT 431 (483)
T ss_dssp HHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHhc
Confidence 99999865 211 11 24789999987666 999999999999988763
No 81
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.83 E-value=4.8e-19 Score=202.07 Aligned_cols=292 Identities=12% Similarity=0.052 Sum_probs=194.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCC-EEEEcCCCCHHHHHHHHHhhcCCCeE
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKK-TFIIASNCHPQTIDICITRADGFDIK 170 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd-~vvv~~~~Hps~~~~~~~~a~~~gi~ 170 (946)
...+..+...++++.+++++|.++.++.+++|+|.+++.++.++. +..++|| +|+++..+||++...++.+ +..|++
T Consensus 57 ~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-~~~g~~ 135 (400)
T 3vax_A 57 YGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-AGRGFE 135 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-HTTTCE
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-HhcCCe
Confidence 344556778899999999999998889999999988887776552 1112789 9999999999999888765 357999
Q ss_pred EEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceE
Q 002263 171 VVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADI 239 (946)
Q Consensus 171 v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi 239 (946)
++.++. ++|++ +++++++|++.+| |.+|.+.|+++|.++|+++|+++++|. ..+.+... +...+ +|+
T Consensus 136 ~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~-a~~~~~~~~~~~~~-~d~ 213 (400)
T 3vax_A 136 VDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDA-AQGYGKVPGDLTTP-IDM 213 (400)
T ss_dssp EEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEEC-TTTTTTSGGGGGSC-CSE
T ss_pred EEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEh-hhhcCCCCcChhhc-CcE
Confidence 998865 34556 7788999999988 679999999999999999999999953 34444332 22344 999
Q ss_pred EEeccccccccCCCCCCceEEEE-Echh-hh---hcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 240 VVGSAQRFGVPMGYGGPHAAFLA-TSQE-YK---RMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 240 ~v~s~k~lg~P~~~GGP~~g~l~-~~~~-~~---~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
+++|.+|+. |+++.|+++ ++++ +. ..+...+.+ + .+..++..+|.|. ...
T Consensus 214 ~~~s~~K~~-----g~~g~g~~~~~~~~~~~~~~~~~~~~~~~------~-----------~~~~~~~~~~~~~---~~~ 268 (400)
T 3vax_A 214 ISISGHKIG-----APKGVGALVTRRREEMDDERVPLEPIMFG------G-----------GQERKLRPGTLPV---PLI 268 (400)
T ss_dssp EEEETGGGT-----SCSSCEEEEECBCSSSTTCBCCCCCSSCS------S-----------CTGGGTSCSCCCH---HHH
T ss_pred EEEeHHHhC-----CCCceEEEEEecchhccccccccCceecC------C-----------CceeeeecCCCCH---HHH
Confidence 999984453 334578998 8873 21 122111111 0 0111233455554 344
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCC---cCeEEEecCC--HHHHHHHHHHcCCeeee
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPF---FDTVKVKCAD--AHAIASAAYKIEMNLRV 389 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~---~~~~~i~~~~--~~~v~~~L~~~GI~~~~ 389 (946)
.++.+++ .++ .++++++.++..++++++.+.|+ ..++++..... ...+.+..++ ..++.+.|. +||.++.
T Consensus 269 ~a~~~al--~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~gi~v~~ 343 (400)
T 3vax_A 269 MGLAEAA--KIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLK-DLVAVAT 343 (400)
T ss_dssp HHHHHHH--HHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHH-HHHHHTT
T ss_pred HHHHHHH--HHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHh-cCcEEEe
Confidence 4444444 222 34788999999999999999999 63388875321 2356666654 788999999 9997643
Q ss_pred e-------------------c----CCeEEEEe-ccCCCHHHHHHHHHHHhC
Q 002263 390 V-------------------D----SNTVTASF-DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ~-------------------~----~~~lris~-~~~~t~edid~ll~~l~~ 417 (946)
- . .+.+|+++ +..+|++|+++++++|+.
T Consensus 344 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 395 (400)
T 3vax_A 344 GSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK 395 (400)
T ss_dssp TTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred cccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence 0 0 38899999 999999999999999874
No 82
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.83 E-value=1.9e-19 Score=202.15 Aligned_cols=295 Identities=12% Similarity=0.014 Sum_probs=203.5
Q ss_pred hHHHHHHHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 96 GRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
+..+.+.++++.+++++|.+ ..++.+++|+|.++++++.++. . + ++++....|.+. .+...++..|++++.+
T Consensus 40 ~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~-~--~--~~i~~~~~~~~~--~~~~~~~~~g~~~~~v 112 (362)
T 3ffr_A 40 KFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV-E--K--KSFHCVNGSFSK--RFYEFAGELGREAYKE 112 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC-S--S--EEEEEECSHHHH--HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc-C--C--cEEEEcCcHHHH--HHHHHHHHhCCCeEEE
Confidence 44577888999999999985 4678888999988887777663 2 4 666666555542 2222244568888887
Q ss_pred ccc--------cccccCCCEeEEEEEcC-CCceeecchHHHHHHHHhC-CcEEEEEecCccccCCCCCCCccceEEEecc
Q 002263 175 DLK--------DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTILKPPGELGADIVVGSA 244 (946)
Q Consensus 175 ~~~--------~l~~i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~-gal~~v~a~~~al~~l~~~~~~GaDi~v~s~ 244 (946)
+.+ +++ ++++|++|++++| |.+|.+.|+++|+++||++ |+++++|+ ..+.+....+.. .+|++++++
T Consensus 113 ~~~~~~~~d~~~l~-~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~-a~~~~~~~~~~~-~~d~~~~s~ 189 (362)
T 3ffr_A 113 EAAFGKGFYPADIT-VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDA-VSSLPYPKFDWT-KIDSVFFSV 189 (362)
T ss_dssp ECCTTCCCCGGGCC-CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEEC-TTTTTSSCCCTT-SCSEEEEET
T ss_pred ecCCCCCCCHHHHh-ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEec-ccccCCcccChh-HCcEEEEec
Confidence 653 333 5678999999988 7899999999999999999 99999953 344443322111 189999998
Q ss_pred -ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccc-cc-ccCCCccchHHHHHHHHHH
Q 002263 245 -QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR-RD-KATSNICTAQALLANMAAM 321 (946)
Q Consensus 245 -k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~ir-re-~aTsni~t~~~l~a~~aa~ 321 (946)
|+|++ +||+|++++++++.+++.....|. +.+.+.+++....+..+ +. .+|.|. ....++.+++
T Consensus 190 ~K~~~~-----~~G~g~~~~~~~~~~~~~~~~~gg-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~al 256 (362)
T 3ffr_A 190 QKCFGL-----PAGLGVWILNDRVIEKSKALLAKR-----KSIGTYHTIPSMLEKARVNQTPETPNA---MNIFLLGKVT 256 (362)
T ss_dssp TSTTCC-----CSCCEEEEEEHHHHHHHHHHHHTT-----CCCCSTTSHHHHHHHHTTTCCSSCCCH---HHHHHHHHHH
T ss_pred ccccCC-----CCceEEEEECHHHHHHhhhccccC-----CCCcccccHHHHHHHhhcCCCCCCchH---HHHHHHHHHH
Confidence 77753 356799999998876653322220 11112222211111111 11 234443 3444444444
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcC-CC---CcCeEEEecCC-HHHHHHHHHHcCCeeee----ec
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQG-LP---FFDTVKVKCAD-AHAIASAAYKIEMNLRV----VD 391 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~-~~---~~~~~~i~~~~-~~~v~~~L~~~GI~~~~----~~ 391 (946)
.++..+|++++.++..++++++++.|+++ | +++.. .. ....+.+..++ +.++.++|.++||.++. ..
T Consensus 257 --~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g~~~~~ 333 (362)
T 3ffr_A 257 --GDMLQISADGIRKQTEEKAALINTYIESSKV-FSFGVEDAKLRSMTTIVANTTMLPGEINKILEPFDMAVGAGYGSKK 333 (362)
T ss_dssp --HHHHHHCHHHHHHHHHHHHHHHHHHHHHCSS-EEESSSCGGGBCSSEEEEEESSCHHHHHHHHGGGTEEEEECSGGGT
T ss_pred --HHHHHccHHHHHHHHHHHHHHHHHHHHHccC-ceeccCChhhcCCceEEEecCCCHHHHHHHHHHCCeEEecCccccC
Confidence 45556679999999999999999999999 6 99875 21 12345566664 88999999999998864 23
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 392 SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 392 ~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++.+|+|++..++++|+++++++|+
T Consensus 334 ~~~iRis~~~~~~~e~i~~l~~~l~ 358 (362)
T 3ffr_A 334 ETQIRIANFPAHSLEQVHKLVQTLK 358 (362)
T ss_dssp TTEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 6789999999999999999999986
No 83
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.83 E-value=3.3e-19 Score=203.42 Aligned_cols=306 Identities=10% Similarity=0.071 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCC-EEEEcCCCCCCCHHHHHH---cCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRN-VCIIPVSAHGTNPATAAM---CGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~-~Ili~~saHg~~~~~a~~---~G~~v 592 (946)
..+...++++++++++|.+... +..++|+++...++.++..+... +++ +|+++...|+++...+.. .|+++
T Consensus 61 ~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~----~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~ 136 (400)
T 3vax_A 61 AKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGER----TGRRHIITSAIEHKAVLEPLEHLAGRGFEV 136 (400)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHH----HTCCEEEEETTSCHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhcc----CCCCEEEECccccHhHHHHHHHHHhcCCeE
Confidence 3456778999999999998543 45566666665555544322222 357 899998878776655443 69999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+.+++++++.+|+++|+++++ +++++|++++| |.+|.+. ++++|+++|+++|+++++|+++..+...+ ....+
T Consensus 137 ~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~~~li~D~a~~~~~~~~-~~~~~- 210 (400)
T 3vax_A 137 DFLTPGPSGRISVEGVMERLR---PDTLLVSLMHVNNETGVIQ-PVAELAQQLRATPTYLHVDAAQGYGKVPG-DLTTP- 210 (400)
T ss_dssp EEECCCTTCCCCHHHHHTTCC---TTEEEEECCSBCTTTCBBC-CHHHHHHHHTTSSCEEEEECTTTTTTSGG-GGGSC-
T ss_pred EEEccCCCCCcCHHHHHHhcC---CCceEEEEECCCCCceeeC-cHHHHHHHHHhcCCEEEEEhhhhcCCCCc-Chhhc-
Confidence 999999899999999999996 78999999998 4689998 79999999999999999999875322111 11233
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEE-Eecc-cC---CCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIG-VKKH-LA---PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~-~~~~-l~---~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
+|++++++||.+ |++|+|+++ ++++ +. ..+.....+... ......++. +...+....+
T Consensus 211 ~d~~~~s~~K~~------g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~a~~~ 273 (400)
T 3vax_A 211 IDMISISGHKIG------APKGVGALVTRRREEMDDERVPLEPIMFGGGQ---ERKLRPGTL--------PVPLIMGLAE 273 (400)
T ss_dssp CSEEEEETGGGT------SCSSCEEEEECBCSSSTTCBCCCCCSSCSSCT---GGGTSCSCC--------CHHHHHHHHH
T ss_pred CcEEEEeHHHhC------CCCceEEEEEecchhccccccccCceecCCCc---eeeeecCCC--------CHHHHHHHHH
Confidence 899999999954 345688888 8762 22 111111111000 000000111 1111111222
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCc-eeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGT-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~-~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
.+..+ .+++.+..++...+++++.+.|+ ...+.+.++.+. ..+.+.+.++ +.+..++.++|. +||.+...
T Consensus 274 al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~L~-~gi~v~~g 344 (400)
T 3vax_A 274 AAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFE------DVDAEAFLVTLK-DLVAVATG 344 (400)
T ss_dssp HHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECT------TCCHHHHHHHHH-HHHHHTTT
T ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeC------CCCHHHHHHHHh-cCcEEEec
Confidence 33333 34677788888889999999998 422222222111 1223445443 467889999999 99976431
Q ss_pred C---------------CCC-----CCEEEEEc-CCCCCHHHHHHHHHHHHHHHHH
Q 002263 826 S---------------WPV-----PGTLMIEP-TESESKEELDRYCDALISIREE 859 (946)
Q Consensus 826 ~---------------~p~-----~~~lri~~-t~~~t~~eid~~~~aL~~i~~e 859 (946)
. ++. .+.+||++ +...|++|+++++++|++++++
T Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 345 SASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp TEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred ccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 1 111 38999999 8888999999999999987653
No 84
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.83 E-value=1.1e-18 Score=200.37 Aligned_cols=305 Identities=17% Similarity=0.170 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCE-EEEcCCCCCCCHHHH----HHc--CCE
Q 002263 520 EMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNV-CIIPVSAHGTNPATA----AMC--GMK 591 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~-Ili~~saHg~~~~~a----~~~--G~~ 591 (946)
+...++++++++++|.+... +.+++|+++...++.+++.+...+ .++++ |+++...|+++.... ... |++
T Consensus 71 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~--~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~ 148 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATR--SPERRVIVTETSNFPTDLYIAEGLADMLQQGYT 148 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHH--STTCCEEEEETTSCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhccccccc--CCCCcEEEEcCCCCCchHHHHHHHHHHhcCCce
Confidence 45678999999999987433 344555555544444433211000 13344 566666777655432 234 999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCc
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 669 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~ 669 (946)
++.++. +++|+++++ +++++|++++|+ .+|.+. ++++|+++|+++|+++++|+++.. +... ....
T Consensus 149 ~~~v~~-------~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~a~~~--g~~~~~~~~ 215 (416)
T 1qz9_A 149 LRLVDS-------PEELPQAID---QDTAVVMLTHVNYKTGYMH-DMQALTALSHECGALAIWDLAHSA--GAVPVDLHQ 215 (416)
T ss_dssp EEEESS-------GGGHHHHCS---TTEEEEEEESBCTTTCBBC-CHHHHHHHHHHHTCEEEEECTTTT--TTSCCCHHH
T ss_pred EEEeCc-------HHHHHHHhC---CCceEEEEeccccCccccc-CHHHHHHHHHHcCCEEEEEccccc--cCcCCChhh
Confidence 999986 788888886 689999999995 689998 799999999999999999998752 2221 1124
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcc-eeEEEecccCCCCCCCccccCC-----CC-CCCCC---CCCCCCcccCccchhh
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVSTG-----GI-PAPEK---SQPLGTIAAAPWGSAL 739 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~-G~i~~~~~l~~~lp~~~v~~~~-----d~-~~~~~---~~~~~~i~~~~~g~~~ 739 (946)
+|+|++++++||+| ++|||+ |++++++++.+.+.....++.. +. ..+.. .... ...+ .+..
T Consensus 216 ~~~d~~~~s~~K~l-----~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~ 286 (416)
T 1qz9_A 216 AGADYAIGCTYKYL-----NGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARY-LCGT---QPIT 286 (416)
T ss_dssp HTCSEEEECSSSTT-----CCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGG-CCSC---CCHH
T ss_pred cCCCEEEecCcccC-----CCCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHh-cCCC---CCHH
Confidence 58999999999998 367888 9999998876655332221100 00 00000 0000 0011 0222
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-C--CeeeccCCC--ceeeeEEEecccccccCCCCHHHHHHH
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-Y--PILFRGVNG--TVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~--~v~~~~~~~--~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
.++++.+.+..+..+++.+..++...+++++.++|++. . .+.+.++.+ ...+.+.++++ +..++.++
T Consensus 287 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~ 358 (416)
T 1qz9_A 287 SLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP--------EGYAVIQA 358 (416)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT--------THHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC--------CHHHHHHH
Confidence 23344556666766788888888889999999999874 2 332222211 01223455543 36789999
Q ss_pred HHHCCcccCCCCCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Q 002263 815 LMDYGFHGPTMSWPVPGTLMIEPT-ESESKEELDRYCDALISIREE 859 (946)
Q Consensus 815 L~~~Gi~~~~~~~p~~~~lri~~t-~~~t~~eid~~~~aL~~i~~e 859 (946)
|.++||.+.. ...+.+||++. ..+|++|+++++++|++++++
T Consensus 359 l~~~gi~~~~---~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 359 LIDRGVIGDY---REPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp HHTTTEECEE---ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCcEecc---CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 9999998632 12578999998 478999999999999988654
No 85
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=3.9e-19 Score=201.45 Aligned_cols=315 Identities=11% Similarity=0.037 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHhhCCC----c-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCC--CCCCHHHHHHcCCEE
Q 002263 520 EMFNNLGEWLCTITGFD----S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSA--HGTNPATAAMCGMKI 592 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~----~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~sa--Hg~~~~~a~~~G~~v 592 (946)
....+++++++++++.. . ..+.+++|+++...++.++. .. ..++++|+++.+. |.+....+...|+++
T Consensus 38 ~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~---~~--~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~ 112 (385)
T 2bkw_A 38 SIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFI---LS--KAPNKNVLVVSTGTFSDRFADCLRSYGAQV 112 (385)
T ss_dssp HHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHS---CT--TCSCCEEEEECSSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHh---cc--CCCCCeEEEEcCCcchHHHHHHHHHcCCce
Confidence 34556778888887753 1 23555667766644443321 00 0245788777442 222224567789999
Q ss_pred EEEcC-CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc--CCEEEEecccccccccccCCC
Q 002263 593 VSVGT-DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPG 668 (946)
Q Consensus 593 v~v~~-~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~gl~~pg 668 (946)
+.+++ +.++.+|+++|++++++ .++++|++++| |.+|.+. ++++|+++|+++ |+++++|+++..+...+ ...
T Consensus 113 ~~v~~~~~~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~-~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~-~~~ 188 (385)
T 2bkw_A 113 DVVRPLKIGESVPLELITEKLSQ--NSYGAVTVTHVDTSTAVLS-DLKAISQAIKQTSPETFFVVDAVCSIGCEEF-EFD 188 (385)
T ss_dssp EEECCSSTTSCCCHHHHHHHHHH--SCCSEEEEESEETTTTEEC-CHHHHHHHHHHHCTTSEEEEECTTTTTTSCC-CTT
T ss_pred EEEecCCCCCCCCHHHHHHHHhc--CCCCEEEEEccCCCcCeEc-CHHHHHHHHHhhCCCCEEEEECccccCCccc-ccc
Confidence 99999 88899999999999973 37889999998 5789998 799999999999 99999999875321111 234
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCC-CC------CCCccccCC-CC--CCCCCCCCCCC-cccCccch
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FL------PSHPVVSTG-GI--PAPEKSQPLGT-IAAAPWGS 737 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~-~l------p~~~v~~~~-d~--~~~~~~~~~~~-i~~~~~g~ 737 (946)
.+|+|++++++||+|+ |++|+|++++++++.+ .+ +....+... .+ ..+........ ..+. +
T Consensus 189 ~~~~d~~~~s~~K~~~-----~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 260 (385)
T 2bkw_A 189 EWGVDFALTASQKAIG-----APAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATP---P 260 (385)
T ss_dssp TTTCSEEEEESSSTTC-----CCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCC---C
T ss_pred ccCceEEEecCccccc-----cCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCC---C
Confidence 5689999999999984 4567899999876544 32 111111000 00 00000000000 0110 1
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHH-hcc-CCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL-EKH-YPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L-~~~-~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
...+.++.+.+..+...|+.+..++...+++++.+.| ++. +.+..+.+.. ...+.+.+.++ +..++.++
T Consensus 261 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 332 (385)
T 2bkw_A 261 VQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVA--------DPPDVIAF 332 (385)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECS--------CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecC--------CHHHHHHH
Confidence 2222233444555555677777788888999999999 775 3322111000 12233556553 26789999
Q ss_pred HHHCCcccCCCC-CC-CCCEEEEE-cC---CCCCHHHHHHHHHHHHHHHHH
Q 002263 815 LMDYGFHGPTMS-WP-VPGTLMIE-PT---ESESKEELDRYCDALISIREE 859 (946)
Q Consensus 815 L~~~Gi~~~~~~-~p-~~~~lri~-~t---~~~t~~eid~~~~aL~~i~~e 859 (946)
|.++||.+.... ++ ..+.+||+ +. ..+|++|+++++++|++++++
T Consensus 333 l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 333 LKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp HHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred HHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 999999875432 21 24789999 54 246899999999999987643
No 86
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.83 E-value=8.1e-19 Score=202.79 Aligned_cols=299 Identities=13% Similarity=0.064 Sum_probs=205.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
.|..+...++++.+++++|.+. .+..++|++++++ +++.+. +++++|+++...|+++...+...|.+++.+
T Consensus 105 ~G~~~~~~~l~~~la~~~g~~~-~i~~~sGs~a~~~---al~~l~-----~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~ 175 (427)
T 2w8t_A 105 NGTFHDHMEVEQALRDFYGTTG-AIVFSTGYMANLG---IISTLA-----GKGEYVILDADSHASIYDGCQQGNAEIVRF 175 (427)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSE-EEEESCHHHHHHH---HHHHHS-----CTTCEEEEETTCCHHHHHHHHHSCSEEEEE
T ss_pred cCCcHHHHHHHHHHHHHhCCCc-eEEecCcHHHHHH---HHHHhc-----CCCCEEEECCcccHHHHHHHHHcCCeeEEe
Confidence 3444667789999999999874 4666788776544 344331 256889999999988888889999999998
Q ss_pred cCCCCCCCCHHHHHHHHHhcCC-CeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cC-----C
Q 002263 596 GTDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TS-----P 667 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~-~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~-----p 667 (946)
+. +|+++|+++++++.+ ++++|++++| |.+|.+. ++++|+++|+++|+++++|+++.....+- .. .
T Consensus 176 ~~-----~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~-~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~ 249 (427)
T 2w8t_A 176 RH-----NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIA-PLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQ 249 (427)
T ss_dssp CT-----TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEEC-CHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHT
T ss_pred CC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhc
Confidence 85 699999999985433 7899999988 5689998 79999999999999999999875322110 00 0
Q ss_pred C-ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 668 G-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 668 g-~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
+ ..++|+++.++||+|+ .|| |++++++++.+.+....... ..+. + .+...++++.+
T Consensus 250 ~~~~~~di~~~s~sK~~g------~~g-G~v~~~~~l~~~l~~~~~~~----------~~~~--~----~~~~~~aa~~~ 306 (427)
T 2w8t_A 250 GLEGQIDFVVGTFSKSVG------TVG-GFVVSNHPKFEAVRLACRPY----------IFTA--S----LPPSVVATATT 306 (427)
T ss_dssp TCTTCCSEEEEESSSTTC------SCC-EEEEECCTTGGGGGGTCHHH----------HSSC--C----CCHHHHHHHHH
T ss_pred CCCcCCcEEEecchhhhc------cCC-CEEEeCHHHHHHHHHhcccc----------cccC--C----CCHHHHHHHHH
Confidence 1 1257999999999985 244 89999888776653210000 0000 1 12223333445
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
.+..+.. +.+..++...+++++.+.|++. +.+..+...+. -+.+.++. +.+..++.++|.++||.+...
T Consensus 307 al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~---~~~~~~~~-----~~~~~~l~~~L~~~Gi~v~~~ 376 (427)
T 2w8t_A 307 SIRKLMT--AHEKRERLWSNARALHGGLKAMGFRLGTETCDSA---IVAVMLED-----QEQAAMMWQALLDGGLYVNMA 376 (427)
T ss_dssp HHHHHTS--CHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSS---EEEEEESS-----HHHHHHHHHHHHHTTEECEEE
T ss_pred HHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCC---EEEEEECC-----HHHHHHHHHHHHHCCeEEeee
Confidence 5555432 3455666778899999999875 33321110222 24455431 134678999999999987543
Q ss_pred CCC-C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 826 SWP-V---PGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 826 ~~p-~---~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.+| + .+.+|++++..+|++|+++++++|+++++++..
T Consensus 377 ~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 377 RPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp CTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 332 1 258999999989999999999999999877554
No 87
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.82 E-value=8.2e-19 Score=199.67 Aligned_cols=320 Identities=15% Similarity=0.093 Sum_probs=217.1
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHhccccCCC
Q 002263 65 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKK 143 (946)
Q Consensus 65 ~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~~~~~~~g 143 (946)
+...|+.+.+.+.+... . .|.+ ...+...++++.+++++|.+.. ++.+++|||.+++.++.++ .. +|
T Consensus 27 ~~~~~~~v~~a~~~~~~---~--~~~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~--~g 94 (393)
T 2huf_A 27 PSNAPQRVLDAMSRPIL---G--HLHP----ETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNL-LE--DG 94 (393)
T ss_dssp CCCCCHHHHHHTTSCCC---C--TTSH----HHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHH-CC--TT
T ss_pred CCCCCHHHHHHHHhhhc---c--CCCH----HHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHH-hC--CC
Confidence 34577777766554221 1 1222 2345677889999999999875 7888899998888777665 23 78
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHh
Q 002263 144 KTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHA 212 (946)
Q Consensus 144 d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~ 212 (946)
|+|+++...|+++. +...++..|++++.++. +++++ +++ ++++|++++| |.+|.+.|+++|.++|++
T Consensus 95 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~ 172 (393)
T 2huf_A 95 DVILIGHTGHWGDR--SADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQ 172 (393)
T ss_dssp CEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHH
T ss_pred CEEEEECCCcchHH--HHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHH
Confidence 99999999998853 22223456888887764 34555 655 7899999988 789999999999999999
Q ss_pred CCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEE
Q 002263 213 NGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 290 (946)
Q Consensus 213 ~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l 290 (946)
+|+++++|. ..+++... +..++|+|++++|. |+|++ +||.|++++++++.+.+..... ....|.+
T Consensus 173 ~~~~li~D~-a~~~~~~~~~~~~~~~d~~~~s~sK~l~g-----~~G~G~~~~~~~~~~~~~~~~~-------~~~~~~~ 239 (393)
T 2huf_A 173 HNCLLIVDT-VASLGGAPMFMDRWEIDAMYTGSQKVLGA-----PPGITPVSFSHRAVERYKRRNT-------KVKVYYW 239 (393)
T ss_dssp TTCEEEEEC-TTTBTTBCCCTTTTTCSEEECCSSSTTCC-----CSSCEEEEECHHHHHHHHTCSS-------CCSCGGG
T ss_pred cCCEEEEEc-ccccCCCCcchhhcCccEEEECCCccccc-----CCCeEEEEECHHHHHHHhhcCC-------CCceEEE
Confidence 999999953 34544332 33567899999998 76753 3557899999887766521100 0000111
Q ss_pred ec------ccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--C
Q 002263 291 AM------QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F 362 (946)
Q Consensus 291 ~l------~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~ 362 (946)
.. ....+..+...+|+|+ ....++.+++ .++..+|++++.++..++++++++.|+++| +++..+. .
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 313 (393)
T 2huf_A 240 DMSLVGDYWGCFGRPRIYHHTISS---TLLYGLREAI--AMACEEGLPALIARHEDCAKRLYRGLQDAG-FELYADPKDR 313 (393)
T ss_dssp CHHHHHHHTTCSSSCCCCSCCCCH---HHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGB
T ss_pred chHHHHhhhccccccCCCCCCCCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccc
Confidence 00 0001112334466665 3333444443 444445788999999999999999999986 8776432 1
Q ss_pred cC-eEEEecC-C--HHHHHHHHHHc-CCeeeee----cCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 002263 363 FD-TVKVKCA-D--AHAIASAAYKI-EMNLRVV----DSNTVTASFDE-TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 363 ~~-~~~i~~~-~--~~~v~~~L~~~-GI~~~~~----~~~~lris~~~-~~t~edid~ll~~l~~ 417 (946)
.. .+.+.++ + ..++.++|.++ ||.++.. .++.+|++++. .++++|+++++++|..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~ 378 (393)
T 2huf_A 314 LSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQE 378 (393)
T ss_dssp CTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHH
Confidence 22 4556664 3 78899999865 9988642 35789999955 4579999999999963
No 88
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.82 E-value=5.1e-19 Score=206.58 Aligned_cols=312 Identities=16% Similarity=0.150 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHhhCCCc----ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH--------HHHHc
Q 002263 521 MFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--------TAAMC 588 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~----~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~--------~a~~~ 588 (946)
+....++++++++|.+. +.+++++|++++.++++++. +++|+||++...|+.+.. .+.+.
T Consensus 101 lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~--------~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~ 172 (490)
T 2a7v_A 101 IELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL--------QPHDRIMGLDLPDGGHLTHGYMSDVKRISAT 172 (490)
T ss_dssp HHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC--------CSCEECCC-----------------------
T ss_pred HHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHc--------CCCCEecccCccccccccchhhhcchhHHHc
Confidence 33456699999999986 56888899888766555442 256899999888876532 23355
Q ss_pred CCE--EEEEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc--c
Q 002263 589 GMK--IVSVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--G 663 (946)
Q Consensus 589 G~~--vv~v~~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~--g 663 (946)
|.. ++.++++ ++|.+|+++|++++.++ ++++|++..|++ |... |+++|+++|+++|++|++|+||..++. +
T Consensus 173 g~~~~~~~~~vd~~~~~iD~d~le~~l~~~--~~klIi~~~s~~-~~~~-dl~~i~~ia~~~g~~livD~Ah~~glv~~g 248 (490)
T 2a7v_A 173 SIFFESMPYKLNPKTGLIDYNQLALTARLF--RPRLIIAGTSAY-ARLI-DYARMREVCDEVKAHLLADMAHISGLVAAK 248 (490)
T ss_dssp --------CCBCTTTCSBCHHHHHHHHHHH--CCSEEEECCSSC-CSCC-CHHHHHHHHHHTTCEEEEECGGGHHHHHTT
T ss_pred CCeEEEEecccccccCCcCHHHHHHHHhhc--CCcEEEEcCCCC-CCcc-cHHHHHHHHHHcCCEEEEccccccccccCC
Confidence 654 4445555 46899999999999743 456677766653 5655 799999999999999999999864432 1
Q ss_pred -ccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCC--CCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 664 -LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP--SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 664 -l~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp--~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
...|. .++|++++++||+| +||..|++++++.+...-+ +.... -+...+-+....+.+.+.+. ...+
T Consensus 249 ~~~~~~-~~aDiv~~S~hK~l------~Gp~GG~i~~~~~~~~~~~~~~~~~~--~~l~~~i~~~~~~g~qggp~-~~~i 318 (490)
T 2a7v_A 249 VIPSPF-KHADIVTTTTHKTL------RGARSGLIFYRKGVKAVDPKTGREIP--YTFEDRINFAVFPSLQGGPH-NHAI 318 (490)
T ss_dssp SSCCGG-GTCSEEEEESSGGG------CSCSCEEEEEECSEEEEETTTEEEEE--CCCHHHHHHHHTTTTCCSCC-HHHH
T ss_pred cCCCCC-CCCCEEEECCcccC------ccccchheeeccchhcccccccchhh--HHHHHHHHHHhcccCCCCch-HHHH
Confidence 12232 27999999999998 4676799999875321000 00000 00000000000000111110 1222
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
++.+.++ ...-.+++++..++...++++|++.|++. +.+...+ ...|.++++++. .+++..++.+.|.+.|
T Consensus 319 aAla~Al-~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~---t~t~lv~vdl~~----~g~~~~~~~~~L~~~G 390 (490)
T 2a7v_A 319 AAVAVAL-KQACTPMFREYSLQVLKNARAMADALLERGYSLVSGG---TDNHLVLVDLRP----KGLDGARAERVLELVS 390 (490)
T ss_dssp HHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSSEEEEECTT----TTCCHHHHHHHHHHTT
T ss_pred HHHHHHH-HHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCC---CCCeEEEEEeCC----CCCCHHHHHHHHHhCC
Confidence 2223333 23323455777788889999999999875 5553222 223557788763 3678889999999999
Q ss_pred cccCCC-----CCC-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTM-----SWP-VPGTLMIEPTE----SESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 820 i~~~~~-----~~p-~~~~lri~~t~----~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
|.+... ..| +++.||+..+. ..+++|++++++.|.+++.....
T Consensus 391 I~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~~~ 443 (490)
T 2a7v_A 391 ITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLE 443 (490)
T ss_dssp EECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 987521 113 46789996643 46789999999999998875543
No 89
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.82 E-value=2e-19 Score=204.99 Aligned_cols=296 Identities=15% Similarity=0.199 Sum_probs=205.2
Q ss_pred cHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 517 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
|..+...++++++++++|.+. .+..++|+++... +++.+. +++++|+++...|+.....++..|.+++.++
T Consensus 85 g~~~~~~~l~~~la~~~~~~~-~i~~~sGt~a~~~---~l~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~ 155 (399)
T 3tqx_A 85 GTQTIHKELEKDISEFLGTDD-TILYSSCFDANGG---LFETLL-----GPEDAIISDELNHASIIDGIRLCKAQRYRYK 155 (399)
T ss_dssp CCBHHHHHHHHHHHHHHTCSE-EEEESCHHHHHHT---THHHHC-----CTTCEEEEETTCCHHHHHHHHSCCSEEEEEC
T ss_pred cCchHHHHHHHHHHHHHCCCc-EEEECchHHHHHH---HHHHhc-----CCCCEEEECCcccHHHHHHHHHcCCceeEeC
Confidence 334557789999999999885 4555677766543 333331 2568999999999888888999999999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCC---CeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CC--C-
Q 002263 597 TDAKGNINIEELRKAAEANRD---NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP--G- 668 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~---~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~p--g- 668 (946)
. .|+++|+++++++.+ ++++|++++| |.+|.+. ++++|.++|+++|+++++|+++...+.+.. .+ .
T Consensus 156 ~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 229 (399)
T 3tqx_A 156 N-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIA-DLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEY 229 (399)
T ss_dssp T-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEEC-CHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHH
T ss_pred C-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHh
Confidence 6 578899999975433 8999999998 5789998 699999999999999999998742221111 00 1
Q ss_pred ---ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 669 ---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 669 ---~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
..+.|+++.++||+|+ |+.+|++++++++.+.+....... ..++.. +...++++.
T Consensus 230 ~~~~~~~di~~~s~sK~~~------g~~gG~~~~~~~~~~~~~~~~~~~----------~~~~~~------~~~~~~~~~ 287 (399)
T 3tqx_A 230 CGVADRVDILTGTLGKALG------GASGGYTSGHKEIIEWLRNRSRPY----------LFSNTV------APVIVATSL 287 (399)
T ss_dssp HTCTTCCSEEEEESSSSSC------SSCCEEEEECHHHHHHHHHHCHHH----------HSSCCC------CHHHHHHHH
T ss_pred hCCCCCCcEEEecchHhcc------cCceEEEEcCHHHHHHHHHhCcce----------eccCCC------cHHHHHHHH
Confidence 1267999999999984 233389998877665432110000 000111 122233344
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 824 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~ 824 (946)
+.+..+. +++.+..++...+++++.+.|++. +.+. .+.+.+ +.+.++. +.+..++.++|.++||.+..
T Consensus 288 ~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gi~v~~ 356 (399)
T 3tqx_A 288 KVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLV--PGNHPI---IPVMLGD-----AQLATNMADHLLQEGIYVVG 356 (399)
T ss_dssp HHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBC--CCSSSE---EEEEEEC-----HHHHHHHHHHHHHTTEECCE
T ss_pred HHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCCEEee
Confidence 4444443 556777778888999999999885 4443 222332 3444431 23567899999999998764
Q ss_pred CCCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 825 MSWP----VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 825 ~~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..|+ ..+.+|++++..++++|+++++++|+++++++
T Consensus 357 ~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 357 FSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp ECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 4443 13589999998899999999999999988764
No 90
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.82 E-value=2.1e-18 Score=193.48 Aligned_cols=286 Identities=18% Similarity=0.152 Sum_probs=197.1
Q ss_pred HHHHHHHHHHhhCCCccccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
..++++++++++|.+...+. .++|+++.. ++++.+. .++++|+++...|..+...+...|++++.++.+++
T Consensus 53 ~~~l~~~la~~~~~~~~~i~~~~g~~~a~~---~~~~~l~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 124 (354)
T 3ly1_A 53 ILMLGNKLAAHHQVEAPSILLTAGSSEGIR---AAIEAYA-----SLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDN 124 (354)
T ss_dssp HHHHHHHHHHHTTSCGGGEEEESHHHHHHH---HHHHHHC-----CTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTT
T ss_pred hHHHHHHHHHHhCCChHHEEEeCChHHHHH---HHHHHHh-----CCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCC
Confidence 45888999999998754444 444554443 3333321 25688999998888777788899999999999888
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHH--cCCEEEEecccccc-cccc-cCC----Ccc-
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNA-QVGL-TSP----GYI- 670 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a-~~gl-~~p----g~~- 670 (946)
+.+|+++|+++++++ +++++|++++|+ .+|.+. +++++.++++. +|+++++|+++... ..+- ..+ ...
T Consensus 125 ~~~d~~~l~~~l~~~-~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
T 3ly1_A 125 WAFDIEGLKAAVAAY-SGPSIVYLVNPNNPTGTIT-PADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGA 202 (354)
T ss_dssp SCCCHHHHHHHHHTC-SSCEEEEEESSCTTTCCCC-CHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTC
T ss_pred CCCCHHHHHHHhccC-CCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcC
Confidence 999999999999742 579999999995 689987 67777777777 99999999986421 1110 011 112
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
+.++++.++||+|+. +|.++|++.+++++.+.+... .. ..+. +.....++.+.+..
T Consensus 203 ~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~------------~~----~~~~----~~~~~~a~~~~l~~ 258 (354)
T 3ly1_A 203 ENIILLKTFSKIHAM----AGMRVGYAVAHPTVIALMGRY------------VA----GEKI----NFSGVDAALASMND 258 (354)
T ss_dssp SSEEEEEESSSTTCC----GGGCCEEEECCHHHHHHHGGG------------TT----CSCC----CHHHHHHHHHHTTC
T ss_pred CCEEEEeeChhhccC----hhhhheeeecCHHHHHHHHHh------------cC----CCCC----CHHHHHHHHHHhcC
Confidence 556888999999853 467889999887766544211 00 0111 12222222333332
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP- 828 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p- 828 (946)
.+.+.+..++...+++++.+.|++. +.+. ++ .+.+ +.++++ + +..++.++|.++||.+. ..|+
T Consensus 259 --~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~-~~~~---~~~~~~------~-~~~~~~~~l~~~gi~v~-g~~~~ 323 (354)
T 3ly1_A 259 --SAFITYSKKSNDVSRQILLKALEDLKLPYL-PS-EGNF---VFHQLV------V-PLKDYQTHMADAGVLIG-RAFPP 323 (354)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHTCCBC-CC-CSSE---EEEECS------S-CHHHHHHHHHHTTEECC-CCCTT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHCCCeEC-CC-CceE---EEEECC------C-CHHHHHHHHHHCCEEEe-ecCCC
Confidence 2556677777788899999999875 4432 21 2322 456654 1 67899999999999977 3343
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..+.+||+++ +++|+++++++|++++++
T Consensus 324 ~~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 324 ADNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp CTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 4689999975 799999999999988653
No 91
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.82 E-value=6.2e-18 Score=199.38 Aligned_cols=358 Identities=13% Similarity=0.100 Sum_probs=227.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCc---ceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 104 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~---~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~ 104 (946)
.+| +++.+-.++++++.+....+.. ...|+|....+...|+++. .++.. +.....+....+.+..+...+.
T Consensus 72 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~-~~~~~---~~n~~~~~~~~~~~~~~le~~~ 145 (497)
T 2qma_A 72 DLD--NKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAA-EAMIA---ALNQSMDSWDQASSATYVEQKV 145 (497)
T ss_dssp CSS--SCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHH-HHHHH---HHCCCTTCGGGCHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHH-HHHHH---hhcccccchhhChHHHHHHHHH
Confidence 356 5788999999999875433322 2357777766544444443 44321 1111122223444555666667
Q ss_pred HHHHHHHhCCCC-cceEEcccHHHHHHHHHHHhcc--c----------cC-C---CC-EEEEcCCCCHHHHHHHHHhhcC
Q 002263 105 QTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNI--Q----------KG-K---KK-TFIIASNCHPQTIDICITRADG 166 (946)
Q Consensus 105 q~~la~L~g~~~-~~~sl~~~~Ta~~ea~~la~~~--~----------~~-~---gd-~vvv~~~~Hps~~~~~~~~a~~ 166 (946)
++++++++|++. ..+.+++|||.++..++.+.+. . .+ + ++ +|+++...|+++.+.++.+ +
T Consensus 146 ~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~--g 223 (497)
T 2qma_A 146 VNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWM--G 223 (497)
T ss_dssp HHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHT--T
T ss_pred HHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHc--C
Confidence 899999999975 6788999999888776655321 0 11 1 45 8999999999999887643 2
Q ss_pred CCe-EEEEecc--------ccccc-cCCC------EeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC
Q 002263 167 FDI-KVVVSDL--------KDIDY-KSGD------VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL 229 (946)
Q Consensus 167 ~gi-~v~~~~~--------~~l~~-i~~~------t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l 229 (946)
.|. +++.++. ++|++ ++++ +.+|+++++ |.+|.+.|+++|+++|+++|++++||+ .++.+..
T Consensus 224 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~-a~~~~~~ 302 (497)
T 2qma_A 224 LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDG-AYGGALI 302 (497)
T ss_dssp SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEE-TTGGGGG
T ss_pred CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEeh-hhhHHHH
Confidence 344 5666654 45555 5332 447888887 569999999999999999999999953 2233222
Q ss_pred CCC-----CCc-cceEEEecc-ccccccCCCCCCceEEEEEchhh-hhcCCCc--eEeEeecCCCCcce-EEeccccccc
Q 002263 230 KPP-----GEL-GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KRMMPGR--IVGVSIDSSGKPAL-RVAMQTREQH 298 (946)
Q Consensus 230 ~~~-----~~~-GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~-~~~lp~~--~~G~s~d~~g~~~~-~l~l~tre~~ 298 (946)
..+ ..+ ++|+++.++ |+|++|. ++|+++++++. ++.+... .+.. .. ...+.+ .+.+ +.
T Consensus 303 ~~~~~~~~~gi~~~D~i~~s~hK~l~~p~-----~~G~l~~~~~~~~~~~~~~~~yl~~-~~-~~~~~~~~~~~----~~ 371 (497)
T 2qma_A 303 LSSHKSRLKGVERAHSISVDFHKLFYQTI-----SCGALLVNDKSNFKFLLHHADYLNR-EH-DELPNLVDKSI----AT 371 (497)
T ss_dssp GSTTGGGGTTGGGCSEEEEETTTTTCCCS-----SCEEEEESCGGGGGGGCC--------------------------CC
T ss_pred hCcchHhhcCcccCCEEEEcchhccCCCc-----ceEEEEEeCHHHHHHhcCCchhcCC-cc-ccCCCccccCC----CC
Confidence 111 223 789999998 6676553 46888887653 3333110 0000 00 000000 0000 01
Q ss_pred ccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC------
Q 002263 299 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD------ 372 (946)
Q Consensus 299 irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~------ 372 (946)
-||. .++ ++.++ +.++|.+|++++.++..+++++|++.|+++.+++++.++....+.|...+
T Consensus 372 ~r~~---------~al-~~~~~--l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~ 439 (497)
T 2qma_A 372 TKRF---------DAL-KVFMT--MQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLD 439 (497)
T ss_dssp SCCC---------THH-HHHHH--HHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHH
T ss_pred CCch---------hHH-HHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHH
Confidence 1111 111 22233 36789999999999999999999999999833999765555666666532
Q ss_pred --HHHHHHHHHHcCCeeee---ec-CCeEEEEe-ccCCCHHHHHHHHHHHhC
Q 002263 373 --AHAIASAAYKIEMNLRV---VD-SNTVTASF-DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 --~~~v~~~L~~~GI~~~~---~~-~~~lris~-~~~~t~edid~ll~~l~~ 417 (946)
..++.++|.++|+.+.. .. .+.+|+|+ +.++|++|+++++++|..
T Consensus 440 ~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~ 491 (497)
T 2qma_A 440 ELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINM 491 (497)
T ss_dssp HHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 24677888889997643 22 35799998 889999999999999863
No 92
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.82 E-value=1.7e-18 Score=195.09 Aligned_cols=284 Identities=12% Similarity=0.111 Sum_probs=194.7
Q ss_pred HHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 522 FNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
..++++++++++|.+... +..++|+++...+ ++.+. .++++|+++...|..+...+...|++++.++.+++
T Consensus 69 ~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~---~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 140 (363)
T 3ffh_A 69 ASSLRKEVADFYQLEEEELIFTAGVDELIELL---TRVLL-----DTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQD 140 (363)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH---HHHHC-----STTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTT
T ss_pred hHHHHHHHHHHhCCChhhEEEeCCHHHHHHHH---HHHHc-----cCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCC
Confidence 357889999999987544 4445555555433 33321 24678999888777666778889999999999888
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc--CCEEEEeccccccccc-ccCC----CccCC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVG-LTSP----GYIGA 672 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~--g~ll~vD~a~~~a~~g-l~~p----g~~Ga 672 (946)
+.+|+++|+++++ +++++|++++|+ .+|.+. ++++|.++++.+ |+++++|+++.....+ .... ...+-
T Consensus 141 ~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 216 (363)
T 3ffh_A 141 GEHDLEGMLNAID---EKTTIVWICNPNNPTGNYI-ELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKN 216 (363)
T ss_dssp SCCCHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTT
T ss_pred CCcCHHHHHHhcc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCC
Confidence 9999999999996 789999999994 689988 799999999888 9999999987521111 1111 11233
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
++++.+++|+|+. +|.++|++++++++.+.+... . . +.+. +.....++.+.+. .
T Consensus 217 ~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~l~~~------------~--~--~~~~----~~~~~~~~~~~l~--~ 270 (363)
T 3ffh_A 217 LIITRTFSKIYGL----ASARVGYGIADKEIIRQLNIV------------R--P--PFNT----TSIGQKLAIEAIK--D 270 (363)
T ss_dssp EEEEEESSSTTCC----SSCCCEEEEECHHHHHHHHHT------------C--C--SCCC----BHHHHHHHHHHHH--C
T ss_pred EEEEeechhhhcC----chhceeeeecCHHHHHHHHHh------------C--C--CCCC----CHHHHHHHHHHhc--C
Confidence 4667788898853 456779999987766544211 0 0 1111 1222223333343 2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCCCC
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPG 831 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p~~~ 831 (946)
.+.+.+..++...+++++.+.|+++..+.+..+.+.+ +.++++ .+..++.++|.++||.+.. ..|..++
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~---~~~~~~-------~~~~~~~~~l~~~gi~v~~g~~~~~~~ 340 (363)
T 3ffh_A 271 QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNF---VLIDLG-------IEAGTIFSYLEKNGYITRSGAALGFPT 340 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSE---EEEECS-------SCHHHHHHHHHHTTEECEETTTTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeE---EEEECC-------CCHHHHHHHHHHCCeEEEeCccCCCCC
Confidence 3556777777888899999999884333221222322 456654 2678999999999998643 2233468
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
.+||+++ +++|+|+++++|+++
T Consensus 341 ~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 341 AVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp EEEEECC---CHHHHHHHHHHHHHH
T ss_pred eEEEECC---CHHHHHHHHHHHHHh
Confidence 9999986 899999999999875
No 93
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.81 E-value=1.6e-18 Score=197.49 Aligned_cols=323 Identities=12% Similarity=0.074 Sum_probs=215.7
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHhccccCCC
Q 002263 65 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKK 143 (946)
Q Consensus 65 ~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~~~~~~~g 143 (946)
|..+|+.+.+.+.+.. ...|+|+ ..+.+.++++.+++++|.+.. ++.+++|||.+++.++.++ .. +|
T Consensus 26 p~~~~~~v~~a~~~~~--~~~~~~~-------~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-~~--~g 93 (396)
T 2ch1_A 26 PSNCSKRVLTAMTNTV--LSNFHAE-------LFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNL-LE--EG 93 (396)
T ss_dssp SCCCCHHHHHHTTSCC--CCTTCHH-------HHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHH-CC--TT
T ss_pred CCCCCHHHHHHhcccc--ccCCChh-------HHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHh-cC--CC
Confidence 5557777776655422 1123221 123467788999999999887 7889999998888777665 23 78
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHh
Q 002263 144 KTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHA 212 (946)
Q Consensus 144 d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~ 212 (946)
|+|++++..|+++. +...++..|++++.++. +++++ +++ ++++|++++| |.+|.+.|+++|.++|++
T Consensus 94 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~ 171 (396)
T 2ch1_A 94 DRVLIAVNGIWAER--AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQ 171 (396)
T ss_dssp CEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHH
T ss_pred CeEEEEcCCcccHH--HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHH
Confidence 99999999999874 21223456888887764 34555 555 7899999998 789999999999999999
Q ss_pred CCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCc---eEeEeecCCCCcc
Q 002263 213 NGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR---IVGVSIDSSGKPA 287 (946)
Q Consensus 213 ~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~---~~G~s~d~~g~~~ 287 (946)
+|+++++|. ..+++... +..++|+|+++.|. |++++ +|++|++++++++++.+... +-.+..+ ...
T Consensus 172 ~~~~li~De-a~~~g~~~~~~~~~~~d~~~~s~~K~~~~-----~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 242 (396)
T 2ch1_A 172 HDCLLIVDA-VASLCGVPFYMDKWEIDAVYTGAQKVLGA-----PPGITPISISPKALDVIRNRRTKSKVFYWD---LLL 242 (396)
T ss_dssp TTCEEEEEC-TTTBTTBCCCTTTTTCCEEECCCC-CCCC-----CSSCEEEEECHHHHHHHHTCSSCCSCGGGC---HHH
T ss_pred cCCEEEEEc-cccccCCccchhhcCcCEEEEcCCccccC-----CCCeEEEEECHHHHHhhhhccCcccceEec---hHH
Confidence 999999953 33444332 34568899999887 66753 35679999998877654211 0000000 000
Q ss_pred eEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCC---c-
Q 002263 288 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPF---F- 363 (946)
Q Consensus 288 ~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~---~- 363 (946)
++..+ ..++..+...+|+|.. ...++.+++ ..+..++++++.++..++++++.+.|+++| ++++.... .
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~---~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~ 315 (396)
T 2ch1_A 243 LGNYW-GCYDEPKRYHHTVASN---LIFALREAL--AQIAEEGLENQIKRRIECAQILYEGLGKMG-LDIFVKDPRHRLP 315 (396)
T ss_dssp HHHHT-TCSSSCCCCCCCCCHH---HHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCBSSCSGGGBCT
T ss_pred HHHhh-hhhcccCCCCCCCcHH---HHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CeeccCCccccCC
Confidence 00000 0001112233555542 333444443 444456788999999999999999999886 88764321 1
Q ss_pred CeEEEecC-C--HHHHHHHHHHc-CCeeeee----cCCeEEEEec-cCCCHHHHHHHHHHHhC
Q 002263 364 DTVKVKCA-D--AHAIASAAYKI-EMNLRVV----DSNTVTASFD-ETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 364 ~~~~i~~~-~--~~~v~~~L~~~-GI~~~~~----~~~~lris~~-~~~t~edid~ll~~l~~ 417 (946)
..+.+.++ + +.++.++|.++ ||.++.. .++.+|++++ ..++++|+++++++|..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~ 378 (396)
T 2ch1_A 316 TVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKE 378 (396)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred ceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHH
Confidence 24556664 2 78899999875 9988642 3578999994 56789999999999973
No 94
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.81 E-value=9.8e-19 Score=198.60 Aligned_cols=320 Identities=13% Similarity=0.115 Sum_probs=217.4
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHhccccCCC
Q 002263 65 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKK 143 (946)
Q Consensus 65 ~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~~~~~~~g 143 (946)
|..+|+.+.+.+.+... . .+.+. ..+...++++.+++++|.+.. ++.++++||.++++++.++ .. +|
T Consensus 31 p~~~~~~v~~a~~~~~~--~---~~~~~----~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~-~~--~g 98 (393)
T 3kgw_A 31 PSNLAPRVLAAGSLRMI--G---HMQKE----MLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNL-LE--PG 98 (393)
T ss_dssp CCCCCHHHHHHTTCCCC--C---TTSHH----HHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHH-CC--TT
T ss_pred CCCCCHHHHHHhccccc--C---cccHH----HHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhc-CC--CC
Confidence 55688888766554211 1 12222 235566788999999999765 4778899998888777665 33 89
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHh
Q 002263 144 KTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHA 212 (946)
Q Consensus 144 d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~ 212 (946)
|+|+++...|.+.. +...++..|.+++.++. +++++ +++ ++++|++.+| |.+|.+.|+++|.++|++
T Consensus 99 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 176 (393)
T 3kgw_A 99 DSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHR 176 (393)
T ss_dssp CEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHH
T ss_pred CEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHH
Confidence 99999987775321 12223456888887664 34555 555 8999999988 779999999999999999
Q ss_pred CCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEE
Q 002263 213 NGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 290 (946)
Q Consensus 213 ~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l 290 (946)
+|+++++|. ..+++... ....+|+|+++.+. |+|++ ++++|++++++++++.+.....+ ...+.+
T Consensus 177 ~~~~li~De-~~~~g~~~~~~~~~~~d~~~~s~sK~~~~-----~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~ 243 (393)
T 3kgw_A 177 YQCLLLVDS-VASLGGVPIYMDQQGIDIMYSSSQKVLNA-----PPGISLISFNDKAKYKVYSRKTK-------PVSFYT 243 (393)
T ss_dssp TTCEEEEEC-TTTTTTSCCCTTTTTCCEEEEESSSTTCC-----CSSCEEEEECHHHHHHHHTCSSC-------CSCSTT
T ss_pred cCCEEEEEC-CccccCcccchhhcCCCEEEecCcccccC-----CCceeEEEECHHHHHHHhccCCC-------CCceee
Confidence 999999953 44544332 34568999999998 76743 45689999999887766321111 011111
Q ss_pred ecccc------cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-C--C
Q 002263 291 AMQTR------EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-L--P 361 (946)
Q Consensus 291 ~l~tr------e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~--~ 361 (946)
++... .+..++..+|.|+ ....++.+++ .++..+|++++.++..++.+++.+.|+++| +++.. . .
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 317 (393)
T 3kgw_A 244 DITYLAKLWGCEGETRVIHHTTPV---TSLYCLRESL--ALIAEQGLENCWRRHREATAHLHKHLQEMG-LKFFVKDPEI 317 (393)
T ss_dssp CHHHHHHHTTCSSSCCCCCCCCCH---HHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGG
T ss_pred cHHHHHHhhhhccccCCCCCCCCH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCChhh
Confidence 11000 0111344556665 3444444443 455567899999999999999999999997 87763 1 1
Q ss_pred Cc-CeEEEecC-C--HHHHHHHHHHc-CCeeee----ecCCeEEEEe-ccCCCHHHHHHHHHHHhC
Q 002263 362 FF-DTVKVKCA-D--AHAIASAAYKI-EMNLRV----VDSNTVTASF-DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 362 ~~-~~~~i~~~-~--~~~v~~~L~~~-GI~~~~----~~~~~lris~-~~~~t~edid~ll~~l~~ 417 (946)
.. ..+.+..+ + ..++.++|.++ ||.++. ..++.+|+++ ...+|++|+++++++|..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 383 (393)
T 3kgw_A 318 RLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALRE 383 (393)
T ss_dssp BCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHH
Confidence 11 22345554 2 78899999987 998864 2367899998 556699999999999963
No 95
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.81 E-value=1.4e-19 Score=203.14 Aligned_cols=305 Identities=12% Similarity=0.061 Sum_probs=196.6
Q ss_pred cHHHHHHHHHHHHHHhhCCCc-c-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH--HHHHcCCEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDS-F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--TAAMCGMKI 592 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~-~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~--~a~~~G~~v 592 (946)
+..+.+.++++++++++|.+. . .+.+++|+++...+ ++.+. +. ++++....|.++.. .+...|+++
T Consensus 40 ~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~---~~~l~------~~-~~i~~~~~~~~~~~~~~~~~~g~~~ 109 (362)
T 3ffr_A 40 KFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERI---IQNCV------EK-KSFHCVNGSFSKRFYEFAGELGREA 109 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHH---HHHHC------SS-EEEEEECSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHH---HHhcc------CC-cEEEEcCcHHHHHHHHHHHHhCCCe
Confidence 455778899999999999852 2 34556666655433 33321 12 44443333323222 356789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHc-CCEEEEecccccccccccCCCcc
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTSPGYI 670 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~-g~ll~vD~a~~~a~~gl~~pg~~ 670 (946)
+.++.+.++.+|+++|+ ++ ++|++|++++| |.+|.+. |+++|+++|+++ |+++++|+++.. +. .+...
T Consensus 110 ~~v~~~~~~~~d~~~l~--~~---~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~p~~~li~D~a~~~--~~--~~~~~ 179 (362)
T 3ffr_A 110 YKEEAAFGKGFYPADIT--VP---ADAEIICLTHNETSSGVSM-PVEDINTFRDKNKDALIFVDAVSSL--PY--PKFDW 179 (362)
T ss_dssp EEEECCTTCCCCGGGCC--CC---TTCCEEEEESEETTTTEEC-CHHHHTTSGGGSTTSEEEEECTTTT--TS--SCCCT
T ss_pred EEEecCCCCCCCHHHHh--cc---CCccEEEEEcCCCCcceeC-CHHHHHHHHHhCCCCEEEEeccccc--CC--cccCh
Confidence 99999888899999998 43 78999999998 5799998 799999999999 999999998642 22 12222
Q ss_pred -CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccc-----cCCCCCCC-C-CCCCCCCcccCccchhhHHH
Q 002263 671 -GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV-----STGGIPAP-E-KSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 671 -GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~-----~~~d~~~~-~-~~~~~~~i~~~~~g~~~~~~ 742 (946)
.+|++++++||+|+ |++|+|++++++++.+.+.....| ...+...+ . ..+. ....+. +.....
T Consensus 180 ~~~d~~~~s~~K~~~-----~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~ 250 (362)
T 3ffr_A 180 TKIDSVFFSVQKCFG-----LPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVN-QTPETP---NAMNIF 250 (362)
T ss_dssp TSCSEEEEETTSTTC-----CCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTT-CCSSCC---CHHHHH
T ss_pred hHCcEEEEecccccC-----CCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcC-CCCCCc---hHHHHH
Confidence 28999999999984 346788999887655433210000 00000000 0 0000 001110 112222
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
.+.+.+..+..+|+.+..++...+++++.+.|++. +.+..+.........+.+.++ + +..++.++|.++||
T Consensus 251 ~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~l~~~gi 323 (362)
T 3ffr_A 251 LLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTT------M-LPGEINKILEPFDM 323 (362)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEES------S-CHHHHHHHHGGGTE
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecC------C-CHHHHHHHHHHCCe
Confidence 33445566666778888888889999999999875 332210100011223455543 3 68899999999999
Q ss_pred ccCCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 821 ~~~~~~~p-~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.+.....+ ..+.+||++...++++|+++++++|+++.
T Consensus 324 ~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 324 AVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 86432112 35789999998899999999999998763
No 96
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.81 E-value=2.9e-18 Score=196.75 Aligned_cols=299 Identities=16% Similarity=0.161 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHHH--cCCEEE
Q 002263 519 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAM--CGMKIV 593 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~~--~G~~vv 593 (946)
.++...+++++++++|.+...+..++|+++...++.++ . .++++|+++...|+.+.. .... .++.++
T Consensus 70 ~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~---~-----~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~ 141 (417)
T 3n0l_A 70 DEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYAAL---I-----NPGDKILGMDLSHGGHLTHGAKVSSSGKMYESC 141 (417)
T ss_dssp HHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH---S-----CTTCEEEEECC----------------CCSEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcceEeccHHHHHHHHHHHh---c-----CCCCEEEecccccccccchhhhhhhhcceeeeE
Confidence 34455677899999999877677788876664443332 1 256899999887766543 2233 456777
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCc-cC
Q 002263 594 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGY-IG 671 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~-~G 671 (946)
.++++.++.+|+++|++++++ +++++|++++|++ |... ++++|+++|++||+++++|+++....... ..+.. .+
T Consensus 142 ~~~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~-G~~~-~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~ 217 (417)
T 3n0l_A 142 FYGVELDGRIDYEKVREIAKK--EKPKLIVCGASAY-ARVI-DFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPY 217 (417)
T ss_dssp EECCCTTSSCCHHHHHHHHHH--HCCSEEEECCSSC-CSCC-CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTT
T ss_pred eccCCCCCCcCHHHHHHHHHh--cCCeEEEECCccc-CccC-CHHHHHHHHHHcCCEEEEECccchhhhhcccCCCcccc
Confidence 888887788999999999973 3678888888884 8887 79999999999999999999864322110 11211 15
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
+|++++++||+| +||.+|+++++ +++.+.+..... .. ..++ + ....+++..+.+..
T Consensus 218 ~di~~~s~sK~l------~g~~~G~~~~~~~~~~~~~~~~~~------------~~--~~~~-~--~~~~~aa~~~a~~~ 274 (417)
T 3n0l_A 218 AHVVSSTTHKTL------RGPRGGIIMTNDEELAKKINSAIF------------PG--IQGG-P--LMHVIAAKAVGFKF 274 (417)
T ss_dssp CSEEEEESSTTT------CSCSCEEEEESCHHHHHHHHHHHT------------TT--TCSS-C--CHHHHHHHHHHHHH
T ss_pred ceEEEeeCcccc------CCCCeeEEEECCHHHHHHHhhhhC------------Cc--ccCC-c--HHHHHHHHHHHHHH
Confidence 799999999988 35666999988 455543311000 00 0111 1 11122223334444
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP- 828 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p- 828 (946)
...+++.+..++...+++++.+.|++. +.+...+ ...+.+++++.. .+.+..++.+.|.++||.+.....|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~v~~~~~~~ 347 (417)
T 3n0l_A 275 NLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDG---TDNHLVLMSFLD----REFSGKDADLALGNAGITANKNTVPG 347 (417)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSSEEEEECTT----SSSCHHHHHHHHHHTTEECEECCCTT
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccCC---CCceEEEEEccc----CCCCHHHHHHHHHHcCeEEeccccCC
Confidence 445667788888888999999999874 4432211 223345666642 2567889999999999987532222
Q ss_pred ------CCCEEEEEcCCC----CCHHHHHHHHHHHHHHHHH
Q 002263 829 ------VPGTLMIEPTES----ESKEELDRYCDALISIREE 859 (946)
Q Consensus 829 ------~~~~lri~~t~~----~t~~eid~~~~aL~~i~~e 859 (946)
..+.+|+++... .++++|++++++|.+++++
T Consensus 348 ~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 348 EIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp CCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 236799987643 5689999999999988754
No 97
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.81 E-value=6.6e-19 Score=199.01 Aligned_cols=307 Identities=11% Similarity=0.000 Sum_probs=195.2
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
..++++.+++++|.+.+ +..++|+++...++.+++. . .+++++|+++...|+++...+...|++++.+++++++
T Consensus 34 ~~~l~~~la~~~~~~~v-~~~~ggt~al~~~~~~~~~----~-~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 107 (375)
T 2fnu_A 34 SLLFEEALCEFLGVKHA-LVFNSATSALLTLYRNFSE----F-SADRNEIITTPISFVATANMLLESGYTPVFAGIKNDG 107 (375)
T ss_dssp HHHHHHHHHHHHTCSEE-EEESCHHHHHHHHHHHSSC----C-CTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTS
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHhcc----c-CCCCCEEEECCCccHhHHHHHHHCCCEEEEeccCCCC
Confidence 56888999999998843 5566777665444433310 0 1256899999999988888888999999999998888
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccCCCEE--EeC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVC--HLN 678 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~GaDi~--~~s 678 (946)
.+|+++|+++++ +++++|++++| +|.+. ++++|.++|+++|+++++|+++....... ...+.++ |+. +++
T Consensus 108 ~~d~~~l~~~i~---~~~~~v~~~~~--tG~~~-~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~i~~~s~s 180 (375)
T 2fnu_A 108 NIDELALEKLIN---ERTKAIVSVDY--AGKSV-EVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFA-LASVFSFH 180 (375)
T ss_dssp SBCGGGSGGGCC---TTEEEEEEECG--GGCCC-CHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSS-SEEEEECC
T ss_pred CCCHHHHHhhcC---cCceEEEEeCC--cCCcc-CHHHHHHHHHHcCCEEEEECccccCCeECCeeccccC-CeEEEeCC
Confidence 899999999886 68999899888 79988 79999999999999999999875321111 1123334 555 455
Q ss_pred CCcccccCCCCCCCcceeEEEe--cccCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~--~~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.||+|+ ||+|+++++ +++.+.+.. ...+.. +...+..+..+.+.. ....... .+.+. ...++
T Consensus 181 ~~K~~~-------~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~--~a~~~---~~~~~ 245 (375)
T 2fnu_A 181 AIKPIT-------TAEGGAVVTNDSELHEKMKLFRSHGML-KKDFFEGEVKSIGHN--FRLNEIQ--SALGL---SQLKK 245 (375)
T ss_dssp TTSSSC-------CSSCEEEEESCHHHHHHHHHHTBTTEE-ESSSSCEEESSCCCB--CCCCHHH--HHHHH---HHHTT
T ss_pred CCCCcc-------ccCceEEEeCCHHHHHHHHHHHhcCCc-ccccccccccccccc--CCCCHHH--HHHHH---HHHHH
Confidence 569873 246677764 344332210 000000 000000000001111 0001211 12221 22456
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccC--C-CceeeeEEEecccccccCCC-CHHHHHHHHHHCCcccCCCCCCC--
Q 002263 756 LTEASKIAILNANYMAKRLEKHYPILFRGV--N-GTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGFHGPTMSWPV-- 829 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~--~-~~~~~e~v~~~~~~~~~~g~-~~~~i~~~L~~~Gi~~~~~~~p~-- 829 (946)
+.+..++...+++++.+.|+++..+.+.++ . ....+.+++.++. .+. +..++.++|.++||.+.....|.
T Consensus 246 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~L~~~gi~v~~~~~p~~~ 321 (375)
T 2fnu_A 246 APFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQ----KFFTCKKLILESLHKRGILAQVHYKPIYQ 321 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECG----GGGGGHHHHHHHHHHTTEECBCCCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCc----cccchHHHHHHHHHHCCCCcccccccccc
Confidence 777777888899999999987523322221 0 1122334555541 123 67899999999999876221121
Q ss_pred --------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 830 --------------------PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 830 --------------------~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+.+||++...+|++|+++++++|+++++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 322 YQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp SHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1579999999899999999999999988765
No 98
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.81 E-value=1e-18 Score=198.83 Aligned_cols=303 Identities=15% Similarity=0.136 Sum_probs=200.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+.+|.+ ... +..++|+++... +++.+. .++++|+++...|..+...++..|+++
T Consensus 67 ~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~---~~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~ 138 (388)
T 1j32_A 67 AGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFN---LMLAMI-----EPGDEVIIPAPFWVSYPEMVKLAEGTP 138 (388)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH---HHHHHC-----CTTCEEEEESSCCTHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHH---HHHHhc-----CCCCEEEEcCCCChhHHHHHHHcCCEE
Confidence 466677777888888777853 333 344445555433 344331 245789999998888777888999999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccc-
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT- 665 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~- 665 (946)
+.++.++ ++.+|+++|+++++ +++++|++++|+ .+|.+. .++++|+++|+++|+++++|+++.... .+-.
T Consensus 139 ~~v~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 215 (388)
T 1j32_A 139 VILPTTVETQFKVSPEQIRQAIT---PKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQH 215 (388)
T ss_dssp EEECCCGGGTTCCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEecCCcccCCCCCHHHHHHhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 9999875 46799999999996 689999999994 689884 259999999999999999999864211 1100
Q ss_pred -CCC-----ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 666 -SPG-----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 666 -~pg-----~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
... ..+.|+++.++||+|+. .|.++|++++++++.+.+.... . . ...++ +..
T Consensus 216 ~~~~~~~~~~~~~~~~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~--~----------~--~~~~~----~~~ 273 (388)
T 1j32_A 216 LSIGAASPEAYERSVVCSGFAKTYAM----TGWRVGFLAGPVPLVKAATKIQ--G----------H--STSNV----CTF 273 (388)
T ss_dssp CCGGGSCHHHHHTEEEEEESTTTTTC----TTTCCEEEECCHHHHHHHHHHH--H----------T--TTCSC----CHH
T ss_pred CCHHHccccccCCEEEEeechhccCC----cccceEEEEeCHHHHHHHHHHH--h----------h--cccCC----CHH
Confidence 111 14578999999999853 3566899998877654432100 0 0 01111 122
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-C
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-Y 818 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~ 818 (946)
...++.+++. .+.+.+.+..++...+++++.+.|++...+.+..+.+.++ ++++++. .+.+..++.++|.+ +
T Consensus 274 ~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~~~ 346 (388)
T 1j32_A 274 AQYGAIAAYE-NSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFY--MFPSIAK----TGRSSLDFCSELLDQH 346 (388)
T ss_dssp HHHHHHHHHH-SCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTE--ECCBCGG----GTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEE--EEEecCC----CCCCHHHHHHHHHHhC
Confidence 2222333333 2445567777777888999999998742222212222221 2234331 14578899999986 7
Q ss_pred CcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 819 GFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 819 Gi~~~~-~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
||.+.. ..|..++++|+++. +++++++++++.|+++++++
T Consensus 347 gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 347 QVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 998643 22323588999996 68999999999999887653
No 99
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.80 E-value=8.2e-19 Score=199.37 Aligned_cols=300 Identities=14% Similarity=0.108 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHhhCC--Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 519 QEMFNNLGEWLCTITGF--DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~--~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
.++..++.+++++.+|. +... +..++|+++...+ ++.+. .++++|+++...|..+...+...|.+++.+
T Consensus 65 ~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~---~~~l~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~ 136 (391)
T 3dzz_A 65 AEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAM---VRQFT-----SPGDQILVQEPVYNMFYSVIEGNGRRVISS 136 (391)
T ss_dssp HHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHH---HHHHS-----CTTCEEEECSSCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHH---HHHhC-----CCCCeEEECCCCcHHHHHHHHHcCCEEEEe
Confidence 45677888899998884 3333 4445555555433 33321 256899999988877777788999999999
Q ss_pred cCCC-C--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccc---ccCHHHHHHHHHHcCCEEEEecccccc-ccc--cc
Q 002263 596 GTDA-K--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVY---EEGIDEICKIIHDNGGQVYMDGANMNA-QVG--LT 665 (946)
Q Consensus 596 ~~~~-~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~---~~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g--l~ 665 (946)
|++. + +.+|+++|++++++ +++++|++++| |.+|.+ + ++++|+++|+++|+++++|+++... ..+ ..
T Consensus 137 ~~~~~~~~~~~d~~~l~~~l~~--~~~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 213 (391)
T 3dzz_A 137 DLIYENSKYSVNWADLEEKLAT--PSVRMMVFCNPHNPIGYAWSEE-EVKRIAELCAKHQVLLISDEIHGDLVLTDEDIT 213 (391)
T ss_dssp CCEEETTEEECCHHHHHHHHTS--TTEEEEEEESSBTTTTBCCCHH-HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCC
T ss_pred eeeecCCceeecHHHHHHHHhc--cCceEEEEECCCCCCCcccCHH-HHHHHHHHHHHCCCEEEEecccccccCCCCCce
Confidence 9852 3 34999999999962 68999999999 578998 5 6999999999999999999986421 111 11
Q ss_pred CCCccC---CC--EEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 666 SPGYIG---AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 666 ~pg~~G---aD--i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
....++ .| +++.++||+|+. +|.++|+++++ +++.+.+...... ..+. +.+ ..
T Consensus 214 ~~~~~~~~~~d~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~~~~-----------~~~~--~~~----~~ 272 (391)
T 3dzz_A 214 PAFTVDWDAKNWVVSLISPSKTFNL----AALHAACAIIPNPDLRARAEESFFL-----------AGIG--EPN----LL 272 (391)
T ss_dssp CGGGSCTTTGGGEEEEECSHHHHTC----TTTCCEEEECCSHHHHHHHHHHHHH-----------HTCS--SCC----TT
T ss_pred ehhhcCccccCcEEEEEeChhhccc----cchhheEEEECCHHHHHHHHHHHHh-----------hccC--CCC----HH
Confidence 112223 57 888999999853 46789999987 6655443211000 0000 111 11
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-H
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 817 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~-~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~ 817 (946)
...++.+.+.. +.+.+.+..++...+++++.+.|++ ...+.+..+.+..+ ++++++. .+.+..++.++|. +
T Consensus 273 ~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~~ 345 (391)
T 3dzz_A 273 AIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYL--AWVDISA----LGMNAEDFCKYLREK 345 (391)
T ss_dssp HHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSE--EEEECGG----GCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEE--EEEehhh----cCCCHHHHHHHHHHh
Confidence 22223333433 4555677777778889999999987 32332222222221 3466542 2467899999996 8
Q ss_pred CCcccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 818 ~Gi~~~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+||.+... .|. ..+.+||+++ +++++++++++.|.+++++
T Consensus 346 ~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 346 TGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp HCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 99986432 232 2478999998 5899999999999988765
No 100
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.80 E-value=8e-18 Score=193.52 Aligned_cols=325 Identities=17% Similarity=0.105 Sum_probs=206.0
Q ss_pred CCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCC
Q 002263 63 YYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK 142 (946)
Q Consensus 63 ~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~ 142 (946)
.+.+..|..+.+.+..... ..|+++. -+...++++.+++++|.+ ++.++++||.+++.++.++ +. +
T Consensus 29 ~~~~~~~~~~~~~~~~~~~--~~y~~~~-------~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l-~~--~ 94 (412)
T 2cb1_A 29 AYGFKTLEEGQERFATGEG--YVYARQK-------DPTAKALEERLKALEGAL--EAVVLASGQAATFAALLAL-LR--P 94 (412)
T ss_dssp BCCCSSHHHHHHHHHHCCS--CSBTTTC-------CHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTT-CC--T
T ss_pred eeecCChHHHHHHhccccC--cCcCCCC-------ChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH-hC--C
Confidence 3445567766543332222 2344332 123567788999999986 5888999998877766654 23 7
Q ss_pred CCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEE
Q 002263 143 KKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVV 218 (946)
Q Consensus 143 gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~ 218 (946)
||+|+++...|+++...+...++..|++++.++. +++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++
T Consensus 95 gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li 174 (412)
T 2cb1_A 95 GDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPEPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALV 174 (412)
T ss_dssp TCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEE
T ss_pred CCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Confidence 8999999999999999887666678999999875 56777 8889999999988 679999999999999999999999
Q ss_pred EEecCcccc-CCCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhh----hcC-CCceEeEeecCCCCcceEEe
Q 002263 219 MATDLLALT-ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYK----RMM-PGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 219 v~a~~~al~-~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~----~~l-p~~~~G~s~d~~g~~~~~l~ 291 (946)
+|. ..+.+ ....+.++|+|++++|. |.|++| |++-.|++..++++. ..+ ++...|.... ..+ .
T Consensus 175 ~D~-~~~~~~~~~~~~~~~~di~~~S~~K~~~~~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~--~ 244 (412)
T 2cb1_A 175 VDN-TFGAAGALCRPLAWGAHVVVESLTKWASGH---GSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW----EAL--R 244 (412)
T ss_dssp EEC-GGGTTTTSCCGGGGTCSEEEEETTTTTTCS---SCCCCEEEEECCCSGGGGSGGGGCC-------H----HHH--G
T ss_pred EEC-CCccccccCCccccCCeEEEECCcccccCC---CCcEEEEEEeccccccccccccccccccccchh----hcc--c
Confidence 953 33443 33345568999999998 777654 222234444443421 011 1111221000 000 0
Q ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CC----------
Q 002263 292 MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL---------- 360 (946)
Q Consensus 292 l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~---------- 360 (946)
.+...+..| .++.|..+. .+.+..+ |+.+.+-+.+++..++..++++++.+.|.+..++.++ .+
T Consensus 245 ~~~~~~~~r--~~~~~~~g~-~~~~~~a--~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~ 319 (412)
T 2cb1_A 245 ARCFPERVR--TLGLSLCGM-ALSPFNA--YLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRN 319 (412)
T ss_dssp GGHHHHHHH--HHHTTTTCC-CCCHHHH--HHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHH
T ss_pred hHHHHHHHH--HHHHHhcCC-CCChHHh--HHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHH
Confidence 000001111 122122111 0001111 1223333455666666778999999999987337643 11
Q ss_pred ------CCcCeEEEecCCHHHHHHHHHHcCCeeeee------------------------------cCCeEEEEeccCCC
Q 002263 361 ------PFFDTVKVKCADAHAIASAAYKIEMNLRVV------------------------------DSNTVTASFDETTT 404 (946)
Q Consensus 361 ------~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~------------------------------~~~~lris~~~~~t 404 (946)
.....+.|.+.+.+++.+.|.+.||.+ .. .++.||+|++.+++
T Consensus 320 ~~~~~~~~~~iv~~~~~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~ 398 (412)
T 2cb1_A 320 ARKYLASGGPILTLDLGDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDP 398 (412)
T ss_dssp HHHHCSSSCSEEEEECSSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCH
T ss_pred HHHhCCCCceEEEEEeCCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCH
Confidence 123357777723778888888889875 21 15789999999999
Q ss_pred HHHHHHHHHHHhC
Q 002263 405 LEDVDKLFIVFAG 417 (946)
Q Consensus 405 ~edid~ll~~l~~ 417 (946)
+++|++++++|..
T Consensus 399 ~~~i~~l~~al~~ 411 (412)
T 2cb1_A 399 LDLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999863
No 101
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.80 E-value=6e-19 Score=201.61 Aligned_cols=292 Identities=15% Similarity=0.216 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
+...++++.+++++|.+ ..+..++|+++... +++.+. .++++|+++...|+++...+...|++++.++.
T Consensus 90 ~~~~~l~~~la~~~g~~-~~i~~~sGs~a~~~---~~~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-- 158 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME-DAILYSSCFDANGG---LFETLL-----GAEDAIISDALNHASIIDGVRLCKAKRYRYAN-- 158 (401)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEESCHHHHHHT---THHHHC-----CTTCEEEEETTCCHHHHHHHHTSCSEEEEECT--
T ss_pred HHHHHHHHHHHHHhCCC-cEEEeCChHHHHHH---HHHHHc-----CCCCEEEEcchhHHHHHHHHHHcCCceEEECC--
Confidence 45678899999999998 44566778765543 344431 25678999999888777778899999999984
Q ss_pred CCCCCHHHHHHHHHhcCC---CeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cC-----CC-
Q 002263 600 KGNINIEELRKAAEANRD---NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TS-----PG- 668 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~---~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~-----pg- 668 (946)
.|+++|++++++..+ ++++|++++| |.+|.+. ++++|.++|+++|+++++|+++...+.+. .. .+
T Consensus 159 ---~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~ 234 (401)
T 1fc4_A 159 ---NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA-NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDV 234 (401)
T ss_dssp ---TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC-CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTC
T ss_pred ---CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCC-CHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCC
Confidence 589999999974322 7899999998 5789998 69999999999999999999873222110 00 01
Q ss_pred ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 669 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 669 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
..+.|+++.++||+|+ |++| |++++++++.+.+.... .... ...+. +...++++.+.+
T Consensus 235 ~~~~di~~~s~sK~~~-----~~~g-G~~~~~~~~~~~l~~~~-----------~~~~-~~~~~----~~~~~~a~~~~l 292 (401)
T 1fc4_A 235 MGRVDIITGTLGKALG-----GASG-GYTAARKEVVEWLRQRS-----------RPYL-FSNSL----APAIVAASIKVL 292 (401)
T ss_dssp TTCCSEEEEESSSTTC-----SSSC-EEEEECHHHHHHHHHHC-----------HHHH-HSCCC----CHHHHHHHHHHH
T ss_pred CcCCcEEEecchhhcc-----CCCC-EEEEcCHHHHHHHHHhC-----------cCce-eCCCC----CHHHHHHHHHHH
Confidence 1257999999999984 3343 88888877655432100 0000 00011 122233334444
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 827 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~ 827 (946)
..+.. ..+..++...+++++.+.|++. +.+. + ..+.+ +.++++. +.+..++.++|.++||.+....+
T Consensus 293 ~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~~~~~---~~~~~~~-----~~~~~~l~~~l~~~gi~v~~~~~ 360 (401)
T 1fc4_A 293 EMVEA--GSELRDRLWANARQFREQMSAAGFTLA-G-ADHAI---IPVMLGD-----AVVAQKFARELQKEGIYVTGFFY 360 (401)
T ss_dssp HHHHT--CHHHHHHHHHHHHHHHHHHHHTTCCBC-C-SSSSE---EEEEEEC-----HHHHHHHHHHHHHTTEECCEECT
T ss_pred HHHhc--CHHHHHHHHHHHHHHHHHHHHcCCccc-C-CCCCE---EEEEcCC-----hHHHHHHHHHHHHCCcEEeeecC
Confidence 44322 2455566778889999999875 4432 2 12222 4455431 23567899999999998754332
Q ss_pred C-C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 828 P-V---PGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 828 p-~---~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+ . .+.+||+++..++++|+++++++|+++++++
T Consensus 361 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 361 PVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp TSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 1 3579999998889999999999999987764
No 102
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.80 E-value=1e-18 Score=212.72 Aligned_cols=314 Identities=14% Similarity=0.135 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-HHHcCCEEEEEcCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGTDA 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-a~~~G~~vv~v~~~~ 599 (946)
.+.++++.+++++|.+...+.++++++++.++++++. .++++||++...|.++... +.+.|++++.++.+.
T Consensus 174 ~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~--------~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALV--------SNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR 245 (730)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence 4779999999999999765555555566655544432 2568999999999888777 788999999987643
Q ss_pred C-----CCCCHHHH-----HHHHHhcCCC---e----EEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccc--
Q 002263 600 K-----GNINIEEL-----RKAAEANRDN---L----STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA-- 660 (946)
Q Consensus 600 ~-----g~~D~e~L-----~~~i~~~~~~---t----~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a-- 660 (946)
+ |.+|+++| +++++++.++ + ++|++++||++|.+. |+++|+++||++|+++++|+|+...
T Consensus 246 ~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~-dl~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIY-NAHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEE-CHHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeec-CHHHHHHHHHHcCCeEEEEcccccccc
Confidence 2 34788888 8888632111 4 789999999999998 8999999999999999999997421
Q ss_pred cccc---cCCC---ccCCC----EEEeCCCcccccCCCCCCC-cceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 661 QVGL---TSPG---YIGAD----VCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 661 ~~gl---~~pg---~~GaD----i~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
+++. ..+- .+|+| +++.|+||+|+ || +.|++.+++....- +...+... .. ......
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~------g~~~gg~I~v~~~~l~g-~~~~i~~~----~~--~~~~~~ 391 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA------GFSQTSQIHKKDSHIKG-QLRYCDHK----HF--NNSFNL 391 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS------CCTTCEEEEEECGGGTT-STTCCCHH----HH--HHHHHH
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCC------CCCCEEEEEecchhhcC-cccccCHH----HH--HHHHHH
Confidence 2111 1122 34888 99999999974 44 45678787654311 00111000 00 000000
Q ss_pred c-ccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhc-c--CCeeeccC--------------------
Q 002263 730 I-AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-H--YPILFRGV-------------------- 785 (946)
Q Consensus 730 i-~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~-~--~~v~~~~~-------------------- 785 (946)
. ++++ +...++..-+.+..+..++..+..++...++++++++|++ + +.+.-+..
T Consensus 392 ~~stsp--~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~ 469 (730)
T 1c4k_A 392 FMSTSP--FYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDY 469 (730)
T ss_dssp HSCSSC--CHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGG
T ss_pred hCCCCC--cHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchh
Confidence 0 1111 1112222222334444422345556778899999999987 3 33311100
Q ss_pred ----------------CCcee---eeEEEeccccc------ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCC
Q 002263 786 ----------------NGTVA---HEFIVDLRGLK------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 840 (946)
Q Consensus 786 ----------------~~~~~---~e~v~~~~~~~------~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~ 840 (946)
.+..+ ..+++..+.+. ...|+++.++.+.|.++||.+.... .+.+|++++..
T Consensus 470 ~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~---~~~ir~~~s~g 546 (730)
T 1c4k_A 470 WRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD---LNSILFLMTPA 546 (730)
T ss_dssp GBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC---SSEEEEECCTT
T ss_pred hccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECC---CCeEEEEeCCC
Confidence 00000 01445543110 1236789999999999999886443 47899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q 002263 841 ESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 841 ~t~~eid~~~~aL~~i~~e~~ 861 (946)
+|++++++++++|.++.++..
T Consensus 547 ~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 547 ETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999987653
No 103
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.80 E-value=8.5e-19 Score=199.12 Aligned_cols=289 Identities=13% Similarity=0.122 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
+...++++.+++++|.+. .+..++|+++... +++.+. +++++|+++...|+.+...+...|.+++.+|.
T Consensus 84 ~~~~~l~~~la~~~g~~~-~i~~~sGt~a~~~---~~~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-- 152 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSR-ALLFISGFAANQA---VIAAMM-----AKEDRIAADRLSHASLLEAASLSPSQLRRFAH-- 152 (384)
T ss_dssp HHHHHHHHHHHHHHTCSE-EEEESCHHHHHHH---HHHHHC-----CTTCEEEEETTCCHHHHHHHHTSSSEEEEECT--
T ss_pred HHHHHHHHHHHHHhCCCc-EEEeCCcHHHHHH---HHHHhC-----CCCcEEEEcccccHHHHHHHHHcCCCEEEeCC--
Confidence 456788999999999874 4566777765543 344331 25678999999888887788899999999985
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccccccccc---ccCCCc--cCCC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTSPGY--IGAD 673 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g---l~~pg~--~GaD 673 (946)
.|+++|++++++..+++++|++++| |.+|.+. ++++|.++|+++|+++++|+++.....+ ...+.. .+.|
T Consensus 153 ---~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~d 228 (384)
T 1bs0_A 153 ---NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSA-PLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPE 228 (384)
T ss_dssp ---TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBC-CHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCS
T ss_pred ---CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCcc-CHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCc
Confidence 5899999999854335888888888 5789998 7999999999999999999987432211 100111 3589
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+++.++||+|+ | +| |++++++++.+.+....... . ...+. +....+++.+.+..+..
T Consensus 229 i~~~s~sK~~~-~-----~G-G~~~~~~~~~~~l~~~~~~~-----------~-~~~~~----~~~~~~~~~~al~~~~~ 285 (384)
T 1bs0_A 229 LLVVTFGKGFG-V-----SG-AAVLCSSTVADYLLQFARHL-----------I-YSTSM----PPAQAQALRASLAVIRS 285 (384)
T ss_dssp EEEEESSSTTS-S-----CC-EEEEECHHHHHHHHHHCHHH-----------H-SSBCC----CHHHHHHHHHHHHHHHS
T ss_pred EEEeeccchhh-c-----cC-cEEEeCHHHHHHHHHhchhh-----------h-cCCCC----CHHHHHHHHHHHHHHhc
Confidence 99999999985 2 33 88988877654432100000 0 00011 22223333444444432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC----
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP---- 828 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p---- 828 (946)
..+.+..++...+++++.+.|++. +++. + ..+.+ +.++++. +.+..++.++|.++||.+....++
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~~~~~---~~~~~~~-----~~~~~~l~~~l~~~gi~v~~~~~~~~~~ 355 (384)
T 1bs0_A 286 DEGDARREKLAALITRFRAGVQDLPFTLA-D-SCSAI---QPLIVGD-----NSRALQLAEKLRQQGCWVTAIRPPTVPA 355 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCEEC-S-CCSSB---CCEEEES-----HHHHHHHHHHHHHTTEECCEECTTSSCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCccc-C-CCCCE---EEEEeCC-----HHHHHHHHHHHHHCCcEEEeecCCCCCC
Confidence 134566677778899999999875 3332 1 12222 2344431 235678999999999987543322
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
..+.+|++++..+|++|+++++++|+++
T Consensus 356 ~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 356 GTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp TCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 1368999999888999999999999865
No 104
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.80 E-value=1.1e-17 Score=190.54 Aligned_cols=317 Identities=14% Similarity=0.104 Sum_probs=215.5
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHhccccCCC
Q 002263 65 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKK 143 (946)
Q Consensus 65 ~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~~~~~~~g 143 (946)
+...|+.+.+.+.+... . .|.+. ..+...++++.+++++|.++. ++.+++|+|.++++++.++. . +|
T Consensus 42 ~~~~~~~v~~a~~~~~~---~--~~~~~----~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~-~--~g 109 (393)
T 1vjo_A 42 PSNAHPSVLQAMNVSPV---G--HLDPA----FLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAV-E--PG 109 (393)
T ss_dssp CCCCCHHHHHHHSSCCC---C--TTSHH----HHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC-C--TT
T ss_pred CCCCCHHHHHHHhcccc---c--ccCHH----HHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhcc-C--CC
Confidence 34577777767664322 1 23222 345677888999999999877 89999999988888776652 3 78
Q ss_pred CEEEEcCCCCHH--HHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHH
Q 002263 144 KTFIIASNCHPQ--TIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNA 210 (946)
Q Consensus 144 d~vvv~~~~Hps--~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a 210 (946)
|+|+++...|++ +...+ +..|++++.++. ++|++ +++ ++++|++++| |.+|.+.|+++|.++|
T Consensus 110 d~Vl~~~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 185 (393)
T 1vjo_A 110 DVVLIGVAGYFGNRLVDMA----GRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELC 185 (393)
T ss_dssp CEEEEEESSHHHHHHHHHH----HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHH
T ss_pred CEEEEEcCChhHHHHHHHH----HHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHH
Confidence 999999999998 55444 346888877764 34555 655 7899999998 7899999999999999
Q ss_pred HhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcce
Q 002263 211 HANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPAL 288 (946)
Q Consensus 211 ~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~ 288 (946)
+++|+++++|. ..+++... +..++++|++++|. |+|++| +++|++++++++++.+..+... ...+
T Consensus 186 ~~~~~~li~De-a~~~g~~~~~~~~~~~di~~~s~sK~l~~~-----~~~G~l~~~~~~~~~~~~~~~~-------~~~~ 252 (393)
T 1vjo_A 186 REFGTLLLVDT-VTSLGGVPIFLDAWGVDLAYSCSQKGLGCS-----PGASPFTMSSRAIEKLQRRRTK-------VANW 252 (393)
T ss_dssp HHHTCEEEEEC-TTTTTTSCCCTTTTTCSEEECCSSSTTCSC-----SSCEEEEECHHHHHHHHTCSSC-------CSCS
T ss_pred HHcCCEEEEEC-CccccCcCCcccccCccEEEEcCcccccCC-----CceEEEEECHHHHHHHhccCCC-------CCce
Confidence 99999999943 33444332 33567899999998 777643 2579999999877655111000 0001
Q ss_pred EEeccccc---ccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---C
Q 002263 289 RVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---F 362 (946)
Q Consensus 289 ~l~l~tre---~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~ 362 (946)
.+.+..+. .+.++..+|.|.. ...++.+++ ..+..+|++++.++..++.+++.+.|+++| +++..+. .
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~---~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 326 (393)
T 1vjo_A 253 YLDMNLLGKYWGSERVYHHTAPIN---LYYALREAL--RLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRL 326 (393)
T ss_dssp TTCHHHHHHHHSTTCCCCSCCCHH---HHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBC
T ss_pred ecCcHhhhhhhccCCCCCCCCCHH---HHHHHHHHH--HHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccC
Confidence 00000000 0112222344542 233333333 444455788999999999999999999986 8876432 1
Q ss_pred cCeEEEecC-C--HHHHHHHHHHc-CCeeeee----cCCeEEEEec-cCCCHHHHHHHHHHHh
Q 002263 363 FDTVKVKCA-D--AHAIASAAYKI-EMNLRVV----DSNTVTASFD-ETTTLEDVDKLFIVFA 416 (946)
Q Consensus 363 ~~~~~i~~~-~--~~~v~~~L~~~-GI~~~~~----~~~~lris~~-~~~t~edid~ll~~l~ 416 (946)
.+.+.+.++ + ..++.++|.++ ||.+... .++.+|+|+. ..++++++++++++|.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~ 389 (393)
T 1vjo_A 327 PTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALE 389 (393)
T ss_dssp SSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHH
Confidence 234566654 2 78899999987 9988642 3578999964 5567888999999886
No 105
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.80 E-value=9.8e-19 Score=197.20 Aligned_cols=281 Identities=12% Similarity=0.111 Sum_probs=194.0
Q ss_pred HHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC-CCCC
Q 002263 524 NLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT-DAKG 601 (946)
Q Consensus 524 el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~-~~~g 601 (946)
++++.+++++|.+... +..++|+++...+ ++.+. .++++|+++...|..+...+...|++++.+++ ++++
T Consensus 69 ~lr~~la~~~~~~~~~v~~~~g~~~a~~~~---~~~l~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 140 (365)
T 3get_A 69 ELKSTLAQKYKVQNENIIIGAGSDQVIEFA---IHSKL-----NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL 140 (365)
T ss_dssp HHHHHHHHHHTCCGGGEEEESSHHHHHHHH---HHHHC-----CTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH
T ss_pred HHHHHHHHHhCCCcceEEECCCHHHHHHHH---HHHHh-----CCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC
Confidence 7788999999987544 4445555555333 33321 25689999998887777778899999999998 6678
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHH--HcCCEEEEeccccccc---ccc--cCC----Cc
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIH--DNGGQVYMDGANMNAQ---VGL--TSP----GY 669 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~--~~g~ll~vD~a~~~a~---~gl--~~p----g~ 669 (946)
+|+++|+++++ +++++|++++|+ .+|.+. +++++.++++ ++|+++++|+++.... .+- ..+ ..
T Consensus 141 -~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 215 (365)
T 3get_A 141 -DEFKKLYETHK---DEIKLIFLCLPNNPLGECL-DASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKE 215 (365)
T ss_dssp -HHHHHHHHHTT---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHH
T ss_pred -CCHHHHHHHhC---CCCCEEEEcCCCCCCCCCc-CHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhcc
Confidence 99999999996 789999999995 689987 6888888887 6799999999874211 111 111 12
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
.+.++++.++||+|+. .|.++|++.+++++.+.+... +. ..+. +.....++.+.+.
T Consensus 216 ~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~------------~~----~~~~----~~~~~~~~~~~l~ 271 (365)
T 3get_A 216 FDNVLYLGTFSKLYGL----GGLRIGYGIANANIISAFYKL------------RA----PFNV----SNLALKAAVAAMD 271 (365)
T ss_dssp CTTEEEEEESSSTTSC----TTTCCEEEEECHHHHHHHHHH------------SC----TTCS----CHHHHHHHHHHHT
T ss_pred CCCEEEEeecchHhcC----cchheEEEEcCHHHHHHHHHh------------cC----CCCc----CHHHHHHHHHHhC
Confidence 3567888899999853 467899999987766543211 00 0111 1222222333333
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC-CCC
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP 828 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~-~~p 828 (946)
..+.+.+..++...+++++.+.|++. .+.+..+.+.+ +.++++. . +..++.++|.++||.+... .|.
T Consensus 272 --~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---~~~~~~~-----~-~~~~~~~~l~~~gi~v~~g~~~~ 339 (365)
T 3get_A 272 --DDEFTEKTLENNFSQMELYKEFAKKH-NIKIIDSYTNF---ITYFFDE-----K-NSTDLSEKLLKKGIIIRNLKSYG 339 (365)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSE---EEEECSS-----S-CHHHHHHHHHTTTEECEECGGGT
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCCCCeE---EEEECCC-----C-CHHHHHHHHHHCCEEEEECccCC
Confidence 23567777777888899999999876 22221222322 4566642 2 7889999999999987432 222
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.+.+|++++ +++|+++++++|++++
T Consensus 340 -~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 340 -LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp -CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 589999986 7999999999998875
No 106
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.80 E-value=1.2e-18 Score=198.37 Aligned_cols=301 Identities=17% Similarity=0.190 Sum_probs=198.6
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Ccc--cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~--~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|. +.. .+..++|+++...+ ++.+. .++++|+++...|..+...+...|++
T Consensus 63 ~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~---~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~g~~ 134 (389)
T 1gd9_A 63 IGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMG---LSAFL-----KDGEEVLIPTPAFVSYAPAVILAGGK 134 (389)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHH---HTTTC-----CTTCEEEEEESCCTTHHHHHHHHTCE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHH---HHHhC-----CCCCEEEEcCCCchhHHHHHHHCCCE
Confidence 46666666677777766685 322 34455666555433 33221 24688999998888888888899999
Q ss_pred EEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccccc-cc--
Q 002263 592 IVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG-- 663 (946)
Q Consensus 592 vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-- 663 (946)
++.+|.++ ++.+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.... .+
T Consensus 135 ~~~v~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~ 211 (389)
T 1gd9_A 135 PVEVPTYEEDEFRLNVDELKKYVT---DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDAR 211 (389)
T ss_dssp EEEEECCGGGTTCCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC
T ss_pred EEEeccCCccCCCCCHHHHHHhcC---cCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCC
Confidence 99999875 35789999999996 689999999995 5898752 59999999999999999999874221 11
Q ss_pred ccCCCc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 664 LTSPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 664 l~~pg~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
...... .+.|+++.++||+|+. .|.++|++++++++.+.+.... ... ..+.+ ..
T Consensus 212 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~------------~~~--~~~~~----~~ 269 (389)
T 1gd9_A 212 HYSIASLDGMFERTITVNGFSKTFAM----TGWRLGFVAAPSWIIERMVKFQ------------MYN--ATCPV----TF 269 (389)
T ss_dssp CCCGGGSTTCGGGEEEEEESTTTTTC----GGGCCEEEECCHHHHHHHHHHH------------TTT--TCSCC----HH
T ss_pred CCCHhhccCCCCCEEEEecChhhcCC----cccceEEEEECHHHHHHHHHHH------------hhh--ccCCC----HH
Confidence 001111 3578999999999853 3456899999876654432100 000 11111 11
Q ss_pred HHHHHHHHHHHHcHh--hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 740 ILPISYTYIAMMGSK--GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 740 ~~~~a~a~l~~lG~e--Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
...++.++|.. +.+ ++.+..++...+++++.+.|++. +.+. .+.+..+ +.++++. .+.+..++.++|.
T Consensus 270 ~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~--~~~~~~~----~~~~~~~~~~~l~ 340 (389)
T 1gd9_A 270 IQYAAAKALKD-ERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTV--KPKGAFY--IFPRIRD----TGLTSKKFSELML 340 (389)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC--CCCBTTE--ECCBCGG----GTCCHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCcchHHHHHHHHHHHHHHHHHHHHHHcCCeec--CCCeeeE--EEEeccC----CCCCHHHHHHHHH
Confidence 12222333332 233 56677777778899999999875 3332 2222221 2344431 1457889999998
Q ss_pred -HCCcccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 817 -DYGFHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 817 -~~Gi~~~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++||.+... .|. ..+.+||+++. ++++++++++.|.+++++.
T Consensus 341 ~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 341 KEARVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp HHTCEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred HhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 899986432 221 25789999974 8999999999999887653
No 107
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.80 E-value=1.8e-18 Score=197.60 Aligned_cols=299 Identities=17% Similarity=0.186 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH-H--HHHcC--CEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-T--AAMCG--MKIVS 594 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~-~--a~~~G--~~vv~ 594 (946)
++..++++++++++|.+...+..++|+++...+ ++.+. .++++|+++...|+.+.. . +...| .+++.
T Consensus 69 ~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a---~~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~ 140 (405)
T 2vi8_A 69 IVEELARERAKQLFGAEHANVQPHSGAQANMAV---YFTVL-----EHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVA 140 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHH---HHHHC-----CTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEE
T ss_pred HHHHHHHHHHHHHhCCCceEEEecCcHHHHHHH---HHHhc-----CCCCEEEEecccccchhcccchhhhccceeEEEe
Confidence 344457789999999987666667776665443 33321 256889999998988753 1 12334 48888
Q ss_pred EcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCc-cC
Q 002263 595 VGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY-IG 671 (946)
Q Consensus 595 v~~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~-~G 671 (946)
++++ .++.+|+++|++++++ .++++|++ .|+.+|... ++++|.++|+++|+++++|+++.....+.. .+.. .+
T Consensus 141 ~~~~~~~~~~d~~~l~~~i~~--~~~~~v~~-~~~~~~~~~-~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~ 216 (405)
T 2vi8_A 141 YGVDPETHVIDYDDVREKARL--HRPKLIVA-AAAAYPRII-DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPY 216 (405)
T ss_dssp ECBCTTTCSBCHHHHHHHHHH--HCCSEEEE-CCSSCCSCC-CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTT
T ss_pred cccccccCCcCHHHHHHHHHh--cCCeEEEE-eCCCCCccC-CHHHHHHHHHHcCCEEEEEccccccccccCcCCCcccc
Confidence 8876 4678999999999973 26777777 455567665 799999999999999999999763221111 1111 16
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
+|+++.++||+|+ |++| |++++++++.+.+.... . .. ..++. +...++++.+.+..+
T Consensus 217 ~di~~~s~sK~~~-----g~~g-G~~~~~~~~~~~l~~~~--~----------~~--~~~~~---~~~~~aa~~~al~~~ 273 (405)
T 2vi8_A 217 AHFVTTTTHKTLR-----GPRG-GMILCQEQFAKQIDKAI--F----------PG--IQGGP---LMHVIAAKAVAFGEA 273 (405)
T ss_dssp CSEEEEESSSTTC-----CCSC-EEEEECHHHHHHHHHHH--T----------TT--TCSSC---CHHHHHHHHHHHHHH
T ss_pred CCEEEEeccccCC-----CCCC-eEEEEcHHHHHHHHhhh--c----------cc--ccCCC---CHHHHHHHHHHHHHH
Confidence 8999999999984 2345 89998876654331100 0 00 01110 111222223344444
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC----
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS---- 826 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~---- 826 (946)
..+++.+..++...+++++.+.|++. +.+. ++.+ ..+-+.++++. .+.+..++.++|.++||.+....
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~-~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~v~~g~~~~~ 346 (405)
T 2vi8_A 274 LQDDFKAYAKRVVDNAKRLASALQNEGFTLV--SGGT-DNHLLLVDLRP----QQLTGKTAEKVLDEVGITVNKNTIPYD 346 (405)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHTTCEEG--GGSC-SSSEEEEECGG----GTCCHHHHHHHHHHHTEECEEECCTTC
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhCCCeEe--cCCC-CceEEEEEccC----CCCCHHHHHHHHHHcCceeccCcCccc
Confidence 44577778888888999999999875 3332 2111 12235566642 24578899999999999864321
Q ss_pred -C-C-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHHHH
Q 002263 827 -W-P-VPGTLMIEPTE----SESKEELDRYCDALISIREEI 860 (946)
Q Consensus 827 -~-p-~~~~lri~~t~----~~t~~eid~~~~aL~~i~~e~ 860 (946)
+ + .++.+|++++. ..+++|+++++++|+++++++
T Consensus 347 ~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 347 PESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp SSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred cCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 1 2 34689999986 467999999999999886543
No 108
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.80 E-value=1.7e-18 Score=197.69 Aligned_cols=295 Identities=13% Similarity=0.153 Sum_probs=199.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
+|..+...++++++++++|.+.+ +.+++|+++... +++.+. .++++|+++...|+.+...+...|.+++.+
T Consensus 84 ~g~~~~~~~l~~~la~~~g~~~v-~~~~ggt~a~~~---~~~~~~-----~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v 154 (398)
T 3a2b_A 84 NGTLDIHVELEEKLSAYVGKEAA-ILFSTGFQSNLG---PLSCLM-----GRNDYILLDERDHASIIDGSRLSFSKVIKY 154 (398)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEE-EEESSHHHHHHH---HHHHSS-----CTTCEEEEETTCCHHHHHHHHHSSSEEEEE
T ss_pred cCCcHHHHHHHHHHHHHhCCCcE-EEECCHHHHHHH---HHHHHh-----CCCCEEEECCccCHHHHHHHHHcCCceEEe
Confidence 45556778899999999998743 455667665543 344321 256889999999998888899999999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCC-CeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccc-cccccCC-Cc-c
Q 002263 596 GTDAKGNINIEELRKAAEANRD-NLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNA-QVGLTSP-GY-I 670 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~-~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl~~p-g~-~ 670 (946)
|. +|+++|+++++++.+ ++++|++++|+ .+|.+. ++++|.++|+++|+++++|+++... ++.-..+ .. +
T Consensus 155 ~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~-~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 228 (398)
T 3a2b_A 155 GH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIV-NLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHF 228 (398)
T ss_dssp CT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBC-CHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHH
T ss_pred CC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCcc-CHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhc
Confidence 87 689999999985332 78999999984 689998 7999999999999999999987422 1110111 11 2
Q ss_pred ----CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 671 ----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 671 ----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
++|+++.++||+|+ | +| |++++++++.+.+...... .. ..+++ +...++++.+
T Consensus 229 ~~~~~~di~~~s~sK~~~-~-----~G-G~~~~~~~~~~~l~~~~~~-----------~~--~~~~~---~~~~~a~~~~ 285 (398)
T 3a2b_A 229 GLNDDVDLIMGTFSKSLA-S-----LG-GFVAGDADVIDFLKHNARS-----------VM--FSASM---TPASVASTLK 285 (398)
T ss_dssp TCGGGCSEEEEESSSTTC-S-----SC-EEEEECHHHHHHHHHHCHH-----------HH--SSBCC---CHHHHHHHHH
T ss_pred CCCcCCeEEEeccccccc-C-----CC-cEEEeCHHHHHHHHHhccc-----------ce--ecCCC---CHHHHHHHHH
Confidence 36999999999985 2 34 8898887765443210000 00 00110 1222222334
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
.+..+ +.+.+..++...+++++.+.|++. +.+. .+.+. -+.+.++. +.+..++.++|.++||.+...
T Consensus 286 ~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~g~---~~~~~~~~-----~~~~~~l~~~l~~~gi~v~~~ 353 (398)
T 3a2b_A 286 ALEII--QNEPEHIEKLWKNTDYAKAQLLDHGFDLG--ATESP---ILPIFIRS-----NEKTFWVTKMLQDDGVFVNPV 353 (398)
T ss_dssp HHHHH--HHCTHHHHHHHHHHHHHHHHHHHTTCCBC--SCCSS---EEEEECCC-----HHHHHHHHHHHHHTTEECEEE
T ss_pred HHHHH--hhCHHHHHHHHHHHHHHHHHHHhcCCCcC--CCCCC---EEEEEcCC-----HHHHHHHHHHHHHCCcEEEee
Confidence 44443 223455666678889999999875 4332 22232 24455531 235678999999999987532
Q ss_pred CCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 826 SWP----VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 826 ~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..+ ..+.+|++++..++++|+++++++|+++++++
T Consensus 354 ~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 354 VSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp CTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 221 24789999998889999999999999987653
No 109
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.80 E-value=2.9e-18 Score=196.01 Aligned_cols=292 Identities=16% Similarity=0.185 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
+...++++.+++++|.+. .+..++|++++++++.++.. .. ++++|+++...|+++...+...|++++.++.+
T Consensus 91 ~~~~~l~~~la~~~~~~~-~i~~~sG~~a~~~~~~~l~~--~~----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~- 162 (401)
T 2bwn_A 91 AYHRRLEAEIAGLHQKEA-ALVFSSAYNANDATLSTLRV--LF----PGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN- 162 (401)
T ss_dssp HHHHHHHHHHHHHTTCSE-EEEESCHHHHHHHHHHHHHH--HS----TTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-
T ss_pred HHHHHHHHHHHHHhCCCc-EEEECCcHHHHHHHHHHHhc--CC----CCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-
Confidence 346688999999999864 34456777655444333211 11 45789999998888887888899999999974
Q ss_pred CCCCCHHHHHHHHHhcC-CCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCC-----cc--
Q 002263 600 KGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG-----YI-- 670 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg-----~~-- 670 (946)
|+++|++++++.. +++++|++++| |.+|.+. ++++|+++|+++|+++++|+++..+. +.+.+ ..
T Consensus 163 ----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~Dea~~~g~--~~~~g~~~~~~~~~ 235 (401)
T 2bwn_A 163 ----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFG-PIKEICDIAEEFGALTYIDEVHAVGM--YGPRGAGVAERDGL 235 (401)
T ss_dssp ----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBC-CHHHHHHHHHHHTCEEEEECTTTTTT--SSTTSCCHHHHHTC
T ss_pred ----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcC-CHHHHHHHHHHcCCEEEEeccccccc--cCCCCceeeeccCc
Confidence 8999999998654 47899999999 4689998 79999999999999999999875322 21111 11
Q ss_pred --CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 671 --GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 671 --GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
+.|+++.+++|+|+. || |++.+++++.+.+....... ... ..+ +...++++.+.+
T Consensus 236 ~~~~~i~~~s~sK~~~~------~G-G~~~~~~~~~~~l~~~~~~~----------~~~--~~~----~~~~~~a~~~al 292 (401)
T 2bwn_A 236 MHRIDIFNGTLAKAYGV------FG-GYIAASARMVDAVRSYAPGF----------IFS--TSL----PPAIAAGAQASI 292 (401)
T ss_dssp GGGCSEEEEESSSTTCS------CC-EEEEECHHHHHHHHHHCHHH----------HTS--BCC----CHHHHHHHHHHH
T ss_pred cccCcEEEeechhhccC------CC-CEEecCHHHHHHHHHhCcCc----------eec--CCC----CHHHHHHHHHHH
Confidence 358888899999853 34 78887766554321000000 000 011 112233345556
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcccCCCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTMS 826 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~~~~ 826 (946)
..+...|+.+..++...+++++.+.|++. +.+. ++.+. -+.++++. +.+..++.++|. ++||.+....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~---~~~~~~~~-----~~~~~~~~~~L~~~~gi~v~~~~ 362 (401)
T 2bwn_A 293 AFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPII--DHGSH---IVPVVIGD-----PVHTKAVSDMLLSDYGVYVQPIN 362 (401)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBC--CCSSS---CEEEECCC-----HHHHHHHHHHHHHHHCEECCEEC
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHCCCccc--CCCCC---eEEEEeCC-----hHHHHHHHHHHHhcCCEEEeecC
Confidence 66666667777778888999999999875 4432 22232 24566541 235678999996 7899875433
Q ss_pred CC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 827 WP-VP---GTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 827 ~p-~~---~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
++ .+ +.+|++++..+|++|+++++++|++++++
T Consensus 363 ~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 363 FPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp TTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 22 22 58999999889999999999999988654
No 110
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.80 E-value=6.3e-18 Score=197.03 Aligned_cols=300 Identities=13% Similarity=0.142 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcC--------
Q 002263 520 EMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG-------- 589 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G-------- 589 (946)
+...+++++++++++.+. ..++.++|++++++++.+++.|+..+|..++++||+ ..+.||....+....+
T Consensus 118 ~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 197 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSL 197 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC------
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccccccc
Confidence 445689999999996543 246778899999888888888877777555666665 5778887766544421
Q ss_pred -----CEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeC-C-Cccccccc---CHHHHHHHHHHcCCEEEEeccc
Q 002263 590 -----MKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQVYMDGAN 657 (946)
Q Consensus 590 -----~~vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~-P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~ 657 (946)
..+..++... .+..|+++|+++++++.+++++|+++. + |..|++.+ .+++|.++|++||++||+|+++
T Consensus 198 ~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 277 (457)
T 3tfu_A 198 WTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIA 277 (457)
T ss_dssp ----CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTT
T ss_pred ccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCc
Confidence 1233344322 233589999999986656788888876 5 46777652 2999999999999999999874
Q ss_pred ccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCC---CCccccCCCCCCCCCCCC
Q 002263 658 MNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP---SHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 658 ~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp---~~~v~~~~d~~~~~~~~~ 726 (946)
.++.+.|. ..+|++++ .|+++ +|.+++|++++++++.+.+. ...+ ..
T Consensus 278 ----~g~gr~G~~~a~~~~~~~pdiit~--sK~l~----gG~~~lG~v~~~~~i~~~~~~~~~~~~-----------~~- 335 (457)
T 3tfu_A 278 ----TGFGRTGALFAADHAGVSPDIMCV--GKALT----GGYLSLAATLCTADVAHTISAGAAGAL-----------MH- 335 (457)
T ss_dssp ----TTTTTTSSSSTHHHHTCCCSEEEE--CGGGG----TTSSCCEEEEEEHHHHHHHHHSSSCSC-----------CC-
T ss_pred ----cCCccccchhHhHhcCCCceEEEE--Chhhh----CCCcceEEEEEcHHHHHHhhccCCCce-----------eE-
Confidence 34444332 23688866 48763 34478999999988765541 1100 00
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CC-ee-eccCCCceeeeEEEecccccc
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YP-IL-FRGVNGTVAHEFIVDLRGLKN 802 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~-v~-~~~~~~~~~~e~v~~~~~~~~ 802 (946)
.++ +.++...++++.+.|..+..+++.+ +...+.++++++|+++ +. +. ..+ .+.+ +.+++..
T Consensus 336 ~~t----~~~n~~a~aaa~aaL~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~v~~vr~-~G~~---~~i~l~~--- 401 (457)
T 3tfu_A 336 GPT----FMANPLACAVSVASVELLLGQDWRT---RITELAAGLTAGLDTARALPAVTDVRV-CGAI---GVIECDR--- 401 (457)
T ss_dssp CCT----TTTCHHHHHHHHHHHHHHHTSCHHH---HHHHHHHHHHHHHGGGGGSTTEEEEEE-CSSC---EEEEESS---
T ss_pred ecC----CCcCHHHHHHHHHHHHHHhhhHHHH---HHHHHHHHHHHHHHHHhcCCCeeeeec-CCeE---EEEEECC---
Confidence 011 1234555556667777665555543 3446778888888764 22 21 111 1322 3344431
Q ss_pred cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 803 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 803 ~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
..+..++.++|.++|+.+.. ..+.+||+|+...|++|+|+++++|+++++++.
T Consensus 402 --~~~~~~~~~~l~~~Gv~v~~----~~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 402 --PVDLAVATPAALDRGVWLRP----FRNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp --CCCHHHHHHHHHHTTEECCC----BTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred --cccHHHHHHHHHHCCeEEEe----cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34678999999999998753 357999999999999999999999999987654
No 111
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.79 E-value=3.5e-18 Score=195.43 Aligned_cols=292 Identities=22% Similarity=0.241 Sum_probs=194.2
Q ss_pred HHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH---HHHHHcCC--EEEEEcCCC
Q 002263 525 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP---ATAAMCGM--KIVSVGTDA 599 (946)
Q Consensus 525 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~---~~a~~~G~--~vv~v~~~~ 599 (946)
.++++++++|.+...+..++|+++... +++.+. .++++|+++...|+.+. ..+...|. +.+.+++++
T Consensus 74 ar~~la~~~g~~~~~i~~~sGt~a~~~---~~~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 145 (407)
T 2dkj_A 74 AIERAKALFGAAWANVQPHSGSQANMA---VYMALM-----EPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP 145 (407)
T ss_dssp HHHHHHHHHTCSEEECCCSSHHHHHHH---HHHHHC-----CTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT
T ss_pred HHHHHHHHhCCCcceEEecchHHHHHH---HHHHhc-----CCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCc
Confidence 456999999998766777778765543 344331 25688999999888773 44555666 555555453
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc--ccc-CCCccCCCEE
Q 002263 600 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--GLT-SPGYIGADVC 675 (946)
Q Consensus 600 -~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~--gl~-~pg~~GaDi~ 675 (946)
++.+|+++|++++++ .++++|++++|++ |... ++++|.++|+++|+++++|+++..++. +.. .+.. ..|++
T Consensus 146 ~~~~~d~~~l~~~l~~--~~~~~v~~~~p~~-~~~~-~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~ 220 (407)
T 2dkj_A 146 DTELIDLEEVRRLALE--HRPKVIVAGASAY-PRFW-DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVV 220 (407)
T ss_dssp TTSSCCHHHHHHHHHH--HCCSEEEECCSSC-CSCC-CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEE
T ss_pred ccCccCHHHHHHHHhh--cCCeEEEEecccc-CCCC-CHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEE
Confidence 578999999999973 3688888877875 5666 799999999999999999999754222 211 1112 37999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+.++||++ +||.+|+++++ +++.+.+.... . . ...++. +...++++.+.+..+..+
T Consensus 221 ~~s~sK~l------~g~~~G~~~~~~~~~~~~l~~~~--~----------~--~~~~~~---~~~~~~a~~~al~~~~~~ 277 (407)
T 2dkj_A 221 TSTTHKTL------RGPRGGLILSNDPELGKRIDKLI--F----------P--GIQGGP---LEHVIAGKAVAFFEALQP 277 (407)
T ss_dssp EEESSGGG------CCCSCEEEEESCHHHHHHHHHHH--T----------T--TTCSSC---CHHHHHHHHHHHHHHHSH
T ss_pred EEeccccC------CCCCceEEEECCHHHHHHHHhhh--c----------c--cccCCC---cHHHHHHHHHHHHHHHHh
Confidence 99999977 34556999998 56654432100 0 0 001110 111122233444544456
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC------
Q 002263 755 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW------ 827 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~------ 827 (946)
++.+..++...+++++.+.|++. +.+..+...+ +-+.++++. .+.+..++.++|.++||.+.....
T Consensus 278 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~ 350 (407)
T 2dkj_A 278 EFKEYSRLVVENAKRLAEELARRGYRIVTGGTDN---HLFLVDLRP----KGLTGKEAEERLDAVGITVNKNAIPFDPKP 350 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSS---SEEEEECGG----GTCCHHHHHHHHHHTTEECEECCCTTCSSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCc---eEEEEECcc----cCCCHHHHHHHHHHcCceecCCcCcccccc
Confidence 77788888888999999999875 3332111112 225566542 245788999999999998643221
Q ss_pred C-CCCEEEEEcCCC----CCHHHHHHHHHHHHHHHHH
Q 002263 828 P-VPGTLMIEPTES----ESKEELDRYCDALISIREE 859 (946)
Q Consensus 828 p-~~~~lri~~t~~----~t~~eid~~~~aL~~i~~e 859 (946)
+ .++.+|++++.. .|++|+++++++|++++++
T Consensus 351 ~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 351 PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 2 257899998753 6899999999999998776
No 112
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.79 E-value=9.5e-19 Score=196.07 Aligned_cols=292 Identities=17% Similarity=0.188 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH--HHHc--CCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMC--GMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~--a~~~--G~~vv~v 595 (946)
+...++++++++++|.+...+.+++|+++...++.+++ .++++|+++...|+..... +... |.+++.+
T Consensus 43 ~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v 114 (356)
T 1v72_A 43 ELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMT--------PPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV 114 (356)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSC--------CTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC
T ss_pred hHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhc--------CCCCEEEEcCccchhhhhchHHHHHhCCcEEEEe
Confidence 34668899999999942223666777766544433221 2568899998877654433 5566 9999999
Q ss_pred cCCCCCCCCHHHHHH-HHHhc----CCCeEEEEEeCCCcccc---cccCHHHHHHHHHHcCCEEEEecccccc-c--ccc
Q 002263 596 GTDAKGNINIEELRK-AAEAN----RDNLSTLMVTYPSTHGV---YEEGIDEICKIIHDNGGQVYMDGANMNA-Q--VGL 664 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~-~i~~~----~~~t~~vvvt~Pn~~G~---~~~~i~~I~~ia~~~g~ll~vD~a~~~a-~--~gl 664 (946)
|.+ ++.+|+++|++ ++++. ++++++|++++|+.+|. .+ ++++|+++|++||+++|+|+++... . .+.
T Consensus 115 ~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 192 (356)
T 1v72_A 115 DGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLD-EIEAIGDVCKSSSLGLHMDGSRFANALVSLGC 192 (356)
T ss_dssp CCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHH-HHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC
T ss_pred cCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCccCCHH-HHHHHHHHHHHcCCeEEEEchhhHhHhccCCC
Confidence 975 57899999999 88631 12789999999977898 44 6999999999999999999987421 1 121
Q ss_pred cCCCc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 665 TSPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 665 ~~pg~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
.+.. .++|++++++||+ +.| .|.|++++++++.+.+... .. ..+.+... ..
T Consensus 193 -~~~~~~~~~~~d~~~~s~sK~-g~~-----~G~g~~~~~~~~~~~~~~~-~~------------~~~~~~~~----~~- 247 (356)
T 1v72_A 193 -SPAEMTWKAGVDALSFGATKN-GVL-----AAEAIVLFNTSLATEMSYR-RK------------RAGHLSSK----MR- 247 (356)
T ss_dssp -CTTTTTGGGTCCEEEECCGGG-TCS-----SCEEEEESSGGGHHHHHHH-HH------------HTTCCCSS----TH-
T ss_pred -CHHHhhhhhcCCEEEEecccC-CCc-----CccEEEEECHHHHhhHHHH-hh------------ccCchhhh----HH-
Confidence 2332 3789999999997 322 2446888777765443210 00 00111110 11
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
..+...+..+..+.+.+..++...+++++.+.|+++..+.+..+.+ .+.+.++++ .++.++|.++|+
T Consensus 248 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--~~~~~~~~~----------~~~~~~l~~~gi 314 (356)
T 1v72_A 248 -FLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTE--ANILFCRLD----------SAMIDALLKAGF 314 (356)
T ss_dssp -HHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCC--SSEEEEEEC----------HHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCC--ccEEEEEcC----------HHHHHHHHhcCe
Confidence 1122234445444455556666788899999998742332211111 122344432 378999999999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+....|+ .+.+|+++...+|++|+++++++|++++++.
T Consensus 315 ~v~~g~~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 315 GFYHDRWG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp BCBCSSSS-TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred EEeccccC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 87532344 6899999988889999999999999886654
No 113
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.79 E-value=1.1e-18 Score=196.74 Aligned_cols=280 Identities=17% Similarity=0.188 Sum_probs=199.5
Q ss_pred hHHHHHHHHHHH-HHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 96 GRLESLLNFQTM-IADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 96 g~l~~l~e~q~~-la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
+..+...++++. +++++|.+ ++.+++|+|.+++.++.++ .. +||+|+++...|+++...++ ..|++++.+
T Consensus 50 ~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~~~~~~-~~--~gd~vl~~~~~~~~~~~~~~----~~g~~~~~v 120 (371)
T 2e7j_A 50 IKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFAVMHSL-AK--KDAWVVMDENCHYSSYVAAE----RAGLNIALV 120 (371)
T ss_dssp ---CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHHHHHHH-CC--TTCEEEEETTCCHHHHHHHH----HTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHHHHHHH-hC--CCCEEEEccCcchHHHHHHH----HcCCeEEEe
Confidence 344556778899 99999988 7888899998888877665 23 78999999999999988854 358888888
Q ss_pred c--cc--------cccc-cC-----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCcc
Q 002263 175 D--LK--------DIDY-KS-----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELG 236 (946)
Q Consensus 175 ~--~~--------~l~~-i~-----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~G 236 (946)
+ .+ +|++ ++ +++++|++.+| |.+|.+.|+++|.++|+++|+++++|. ..+.+... +..+++
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~ 199 (371)
T 2e7j_A 121 PKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNG-AYAIGRMPVSLKEIG 199 (371)
T ss_dssp CCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEEC-TTTBTTBCCCHHHHT
T ss_pred ecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEEC-ccccCCCCCChhhcC
Confidence 7 53 3444 54 68999999998 789999999999999999999999953 44554432 334678
Q ss_pred ceEEEecc-ccccccCCCCCCceEEEEEchhhhhc-CCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 237 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 237 aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~-lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
+|++++|. |+|++| +++|++++++++.+. +.....| +. +...++.+|+|.. ..
T Consensus 200 ~di~~~s~sK~~~~~-----~~~G~~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~~~~~~~---~~ 254 (371)
T 2e7j_A 200 ADFIVGSGHKSMAAS-----GPIGVMGMKEEWAEIVLRRSEKY------KN-----------KEVELLGCTARGA---TI 254 (371)
T ss_dssp CSEEEEEHHHHSSCC-----SSCEEEEECTTTTTTTTCBCSSC------TT-----------SBGGGTTCCCCSH---HH
T ss_pred CCEEEecCCcCCCCC-----CCcEEEEEechhhhhhccccccC------cc-----------cccccccCCcCHH---HH
Confidence 99999998 778643 357999999988776 6321100 00 0001224566653 23
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHH--HHHHHHHHHHHhcCCCEEEcCCC--CcCeEEEecCCHHHHHHHHHHcCCeeeee
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRV--HGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCADAHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~--~~~a~~l~~~L~~~g~~~~~~~~--~~~~~~i~~~~~~~v~~~L~~~GI~~~~~ 390 (946)
.++.+++ .++.. ++.++. .++++++++.|+++| +++..+. ....+.+.+++..++.+.|.++||.+...
T Consensus 255 ~a~~~~l--~~~~~----~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 327 (371)
T 2e7j_A 255 ITLMASF--PHVRE----RIKRWDEEVEKARRFAAEMEKLG-IKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRE 327 (371)
T ss_dssp HHHHHHH--HHHHH----HGGGHHHHHHHHHHHHHHHHHTT-CEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHH
T ss_pred HHHHHHH--HHHHH----HHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCccCceEEEECCCHHHHHHHHHHCCEEEEec
Confidence 3333343 22211 566777 788999999999886 8887432 23345555534567888898889987541
Q ss_pred ---------cCCeEE-EEeccC-CCHHHHHHHHHHHhC
Q 002263 391 ---------DSNTVT-ASFDET-TTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ---------~~~~lr-is~~~~-~t~edid~ll~~l~~ 417 (946)
.++.+| ++++.+ ++++|+++++++|..
T Consensus 328 ~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~ 365 (371)
T 2e7j_A 328 LKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKE 365 (371)
T ss_dssp HHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHH
Confidence 157899 999998 999999999999863
No 114
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.79 E-value=9.7e-19 Score=200.03 Aligned_cols=302 Identities=13% Similarity=0.113 Sum_probs=200.3
Q ss_pred ccHHHHHHHHHHHHHHhhCCCc---cc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDS---FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~---~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.|..++..++++++++.+|.+. .. +..++|+++... +++.+. .++++|+++...|..+...+...|.+
T Consensus 78 ~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~---~~~~l~-----~~gd~vl~~~~~~~~~~~~~~~~g~~ 149 (407)
T 3nra_A 78 RGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFL---AVAATV-----ARGDKVAIVQPDYFANRKLVEFFEGE 149 (407)
T ss_dssp TCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH---HHHTTC-----CTTCEEEEEESCCTHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH---HHHHhC-----CCCCEEEEcCCcccchHHHHHHcCCE
Confidence 4677888889999999999842 22 444555555433 333321 25688999998888887888999999
Q ss_pred EEEEcC------CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCCEEEEecccccc-
Q 002263 592 IVSVGT------DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNA- 660 (946)
Q Consensus 592 vv~v~~------~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a- 660 (946)
++.+++ +.++.+|+++|+++++ +++++|++++|+ .+|.+. + +++|+++|++||+++++|+++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~~ 225 (407)
T 3nra_A 150 MVPVQLDYVSADETRAGLDLTGLEEAFK---AGARVFLFSNPNNPAGVVY-SAEEIGQIAALAARYGATVIADQLYSRLR 225 (407)
T ss_dssp EEEEEBCCCSSCCSSCCBCHHHHHHHHH---TTCCEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSB
T ss_pred EEEeecccccccCcCCCcCHHHHHHHHh---hCCcEEEEcCCCCCCCccc-CHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 999998 3568899999999998 588899999995 689886 5 999999999999999999987421
Q ss_pred cccc--cCC-----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 661 QVGL--TSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 661 ~~gl--~~p-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
.++- ... ...+.++++.++||+|+. +|.++|++.+++++.+.+..... ....+++
T Consensus 226 ~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~l~~~~~--------------~~~~~~~ 287 (407)
T 3nra_A 226 YAGASYTHLRAEAAVDAENVVTIMGPSKTESL----SGYRLGVAFGSRAIIARMEKLQA--------------IVSLRAA 287 (407)
T ss_dssp CTTCCCCCGGGCTTSCGGGEEEEECSSSTTCC----GGGCCEEEEECHHHHHHHHHHHH--------------HHTSSSC
T ss_pred cCCCCCCChhhcCcccCCcEEEEeCcccccCC----CeeeEEEEEcCHHHHHHHHHHHh--------------hhccCCC
Confidence 1111 110 123456888999999853 36778999988776654321100 0011111
Q ss_pred ccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHH
Q 002263 734 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 813 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~ 813 (946)
.....++.+++. .+.+.+.+..++...+++++.+.|+++..+.+..+.+..+ +.++++. .+.+..++.+
T Consensus 288 ----~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~ 356 (407)
T 3nra_A 288 ----GYSQAVLRGWFD-EAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSY--LFPRLPK----LAVAPAEFVK 356 (407)
T ss_dssp ----HHHHGGGGGTTC-CCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSE--ECCBCCC----BSSCHHHHHH
T ss_pred ----hHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEE--EEEeCCC----CCCCHHHHHH
Confidence 111111111121 1234456666677788889999998752222212122121 3344431 1467889999
Q ss_pred HHHH-CCcccCCC-CC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 814 RLMD-YGFHGPTM-SW-P-VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 814 ~L~~-~Gi~~~~~-~~-p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+|.+ +||.+... .| + ..+.+||+++. ++++|+++++.|.++++++
T Consensus 357 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 357 ILRLQAGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp HHHHHHCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 9975 69986432 22 2 35889999984 8999999999999988765
No 115
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.79 E-value=5e-18 Score=192.90 Aligned_cols=298 Identities=12% Similarity=0.104 Sum_probs=197.1
Q ss_pred cHHHHHHHHHHHHHHhhC--CCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 517 GYQEMFNNLGEWLCTITG--FDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G--~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+..+...++++++++.+| .+... +..++|+++...+ ++.+. .++++|+++...|..+...+...|.+++
T Consensus 68 ~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~---~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~ 139 (391)
T 4dq6_A 68 RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLL---INELT-----KANDKIMIQEPVYSPFNSVVKNNNRELI 139 (391)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH---HHHHS-----CTTCEEEECSSCCTHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHH---HHHhC-----CCCCEEEEcCCCCHHHHHHHHHcCCeEE
Confidence 345677889999999999 44433 4455565555433 33321 2468899999988887778889999999
Q ss_pred EEcCC--CCC--CCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccc---ccCHHHHHHHHHHcCCEEEEecccccc-cccc
Q 002263 594 SVGTD--AKG--NINIEELRKAAEANRDNLSTLMVTYP-STHGVY---EEGIDEICKIIHDNGGQVYMDGANMNA-QVGL 664 (946)
Q Consensus 594 ~v~~~--~~g--~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~---~~~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl 664 (946)
.+|++ .++ .+|+++|+++++ + +++|++++| |.+|.+ + ++++|+++|+++|+++++|+++... ..+-
T Consensus 140 ~~~~~~~~~~~~~~d~~~l~~~l~---~-~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 214 (391)
T 4dq6_A 140 ISPLQKLENGNYIMDYEDIENKIK---D-VKLFILCNPHNPVGRVWTKD-ELKKLGDICLKHNVKIISDEIHSDIILKKH 214 (391)
T ss_dssp ECCCEECTTSCEECCHHHHHHHCT---T-EEEEEEESSBTTTTBCCCHH-HHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred eeeeeecCCCceEeeHHHHHHHhh---c-CCEEEEECCCCCCCcCcCHH-HHHHHHHHHHHcCCEEEeeccccccccCCC
Confidence 99987 333 589999999996 4 999999999 468998 5 6999999999999999999986421 1111
Q ss_pred --cCCCccCCC-----EEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 665 --TSPGYIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 665 --~~pg~~GaD-----i~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
.....++.| +++.++||+|+. +|.++|++.+++ ++.+.+..... ...+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~~~-----------~~~~~~~------ 273 (391)
T 4dq6_A 215 KHIPMASISKEFEKNTITCMAPTKTFNI----AGLQSSYVVLPDEKDYKLLDDAFT-----------RIDIKRN------ 273 (391)
T ss_dssp CCCCGGGSCHHHHHTEEEEECSHHHHTC----GGGCCEEEECCSHHHHHHHHHHHH-----------HTTCCCC------
T ss_pred CccCHHHcCccccCcEEEEEechhhccC----cccceEEEEeCCHHHHHHHHHHHH-----------hhcCCCC------
Confidence 111122223 788899999853 356789998875 55544321000 0000111
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
+.....++.+.+.. +.+.+.+..++...+++++.+.|++. ..+.+..+.+.++ +.++++. .+.+..++.++|
T Consensus 274 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l 346 (391)
T 4dq6_A 274 NCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYL--LWVDFSA----LGLSDEELESIL 346 (391)
T ss_dssp CHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSE--EEEECGG----GCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEE--EEEEhhh----cCCCHHHHHHHH
Confidence 12222233333333 44456667777778899999999873 2332222222221 3366642 146789999999
Q ss_pred HHC-CcccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 816 MDY-GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 816 ~~~-Gi~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.++ ||.+.. ..|. ..+.+|++++ +++++++++++.|++++
T Consensus 347 ~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 347 VQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp HHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred HHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 998 998642 2222 3489999998 58999999999998764
No 116
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.79 E-value=3.7e-18 Score=192.64 Aligned_cols=284 Identities=14% Similarity=0.131 Sum_probs=193.1
Q ss_pred HHHHHHHHHHhhCC-Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 522 FNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 522 ~~el~~~la~l~G~-~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
..++++++++++|. +... +.+++|+++.. ++++.+. .++++|+++...|..+...+...|++++.+++++
T Consensus 69 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~---~~~~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~ 140 (367)
T 3euc_A 69 SEALRAKLKEVMQVPAGMEVLLGNGSDEIIS---MLALAAA-----RPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA 140 (367)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEEEHHHHHHH---HHHHHTC-----CTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCCHHHHHH---HHHHHHc-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC
Confidence 34788899999998 4433 33444444443 3344321 2568899998888888888899999999999998
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHc--CCEEEEeccccccccccc---CCCccC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDN--GGQVYMDGANMNAQVGLT---SPGYIG 671 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~--g~ll~vD~a~~~a~~gl~---~pg~~G 671 (946)
++.+|+++|++++++ .++++|++++|+ .+|.+. .++++|+++|++| |+++++|+++.. +.+-. .....+
T Consensus 141 ~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~ 217 (367)
T 3euc_A 141 DFTLDRGAMLAAMAE--HQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP-FAQESWMSRLTDFG 217 (367)
T ss_dssp TSCCCHHHHHHHHHH--HCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCC-SSSCCSGGGGGTCT
T ss_pred CCCCCHHHHHHHhhc--cCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchh-hcccchHHHHhhCC
Confidence 889999999999983 278899999995 589884 2589999999999 999999998642 11111 112335
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
.++++.++||+ + .+|.++|++.+++++.+.+... + . ..+. +.....++.+++..
T Consensus 218 ~~i~~~s~sK~-~----~~G~r~G~~~~~~~~~~~~~~~------------~--~--~~~~----~~~~~~a~~~~l~~- 271 (367)
T 3euc_A 218 NLLVMRTVSKL-G----LAGIRLGYVAGDPQWLEQLDKV------------R--P--PYNV----NVLTEATALFALEH- 271 (367)
T ss_dssp TEEEEEECCCT-T----SCSCCEEEEEECHHHHHHHGGG------------C--C--SSCC----CHHHHHHHHHHHTT-
T ss_pred CEEEEecchhh-c----ccccCceeeeeCHHHHHHHHHh------------C--C--CCCC----CHHHHHHHHHHhcC-
Confidence 56888889998 4 3467889999987765543211 0 0 0111 12222333444433
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-C-C-
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-P- 828 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~-p- 828 (946)
.+.+.+..++...+++++.+.|+++..+....+.+.+ +.++++ +..++.++|.++||.+.... | +
T Consensus 272 -~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~---~~~~~~--------~~~~l~~~l~~~gi~v~~~~~~~~~ 339 (367)
T 3euc_A 272 -VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANF---LLARVP--------DAAQTFDRLLARKVLIKNVSKMHPL 339 (367)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSE---EEEECS--------CHHHHHHHHHTTTEECEECGGGCGG
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeE---EEEECC--------CHHHHHHHHHHCCeEEEECCccCCC
Confidence 4556777777888899999999875233221212222 345542 57899999999999875322 1 1
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
..+++||+++ +++|+|+++++|++++
T Consensus 340 ~~~~iRis~~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 340 LANCLRVTVS---TPEENAQFLEAFAASL 365 (367)
T ss_dssp GTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence 3589999976 8999999999998874
No 117
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.78 E-value=1.2e-17 Score=192.99 Aligned_cols=277 Identities=16% Similarity=0.164 Sum_probs=195.3
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 94 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 94 sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
..|..+...++++.+++++|.+ ...++.+||.+.++++.++ . ++||+|+++...|+++...++. .|.+++.
T Consensus 104 ~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~al~~l-~--~~gd~vl~~~~~h~~~~~~~~~----~g~~~~~ 174 (427)
T 2w8t_A 104 LNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLGIISTL-A--GKGEYVILDADSHASIYDGCQQ----GNAEIVR 174 (427)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHH-S--CTTCEEEEETTCCHHHHHHHHH----SCSEEEE
T ss_pred ccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHHHHHHh-c--CCCCEEEECCcccHHHHHHHHH----cCCeeEE
Confidence 3455566778889999999986 4667888887777655554 2 2789999999999999988753 4777777
Q ss_pred ecc---ccccc-cCC----CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC--------C-CCc
Q 002263 174 SDL---KDIDY-KSG----DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP--------P-GEL 235 (946)
Q Consensus 174 ~~~---~~l~~-i~~----~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~--------~-~~~ 235 (946)
++. ++|++ +.+ ++++|++.++ |.+|.+.|+++|.++|+++|+++++| +.++.+.... . -..
T Consensus 175 ~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~D-ea~~~~~~~~~g~~~~~~~~~~~ 253 (427)
T 2w8t_A 175 FRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVD-EAHSMGFFGPNGRGVYEAQGLEG 253 (427)
T ss_dssp ECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEE-CTTTTTTSSTTSCCHHHHTTCTT
T ss_pred eCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEE-CCccccccCCCCCchHhhcCCCc
Confidence 654 55655 433 7899999887 78999999999999999999999994 3444433321 1 123
Q ss_pred cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 236 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 236 GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
++|++++|. |.|+ .|| |++++++++++.+... .+.|. ..++.|. ...
T Consensus 254 ~~di~~~s~sK~~g------~~g-G~v~~~~~l~~~l~~~----------~~~~~------------~~~~~~~---~~~ 301 (427)
T 2w8t_A 254 QIDFVVGTFSKSVG------TVG-GFVVSNHPKFEAVRLA----------CRPYI------------FTASLPP---SVV 301 (427)
T ss_dssp CCSEEEEESSSTTC------SCC-EEEEECCTTGGGGGGT----------CHHHH------------SSCCCCH---HHH
T ss_pred CCcEEEecchhhhc------cCC-CEEEeCHHHHHHHHHh----------ccccc------------ccCCCCH---HHH
Confidence 689999997 8775 234 8999998887765210 00010 0122222 222
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-CcCeEEEecCC---HHHHHHHHHHcCCeeeee
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCAD---AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~ 390 (946)
.+..+++ ..+. .++++.++..++.++|++.|+++| +++...+ ....+.+.+++ ..++.++|.++||.+...
T Consensus 302 aa~~~al--~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~ 376 (427)
T 2w8t_A 302 ATATTSI--RKLM--TAHEKRERLWSNARALHGGLKAMG-FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMA 376 (427)
T ss_dssp HHHHHHH--HHHT--SCHHHHHHHHHHHHHHHHHHHHHT-CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTTEECEEE
T ss_pred HHHHHHH--HHHh--cCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCCeEEeee
Confidence 2222333 3332 256788889999999999999887 8887333 33445566654 678999999999988654
Q ss_pred c-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 D-------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ~-------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. .+.+|++++..+|++|+++++++|..
T Consensus 377 ~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~ 410 (427)
T 2w8t_A 377 RPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQA 410 (427)
T ss_dssp CTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2 25799999999999999999999974
No 118
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.78 E-value=2.5e-17 Score=190.16 Aligned_cols=319 Identities=14% Similarity=0.134 Sum_probs=197.9
Q ss_pred ccHHHHHHHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHH-HHHH---hcCC---------CCCCEEEEcCCCCCCC
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIR-AYHK---ARGD---------HHRNVCIIPVSAHGTN 581 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r-~y~~---~~G~---------~~~~~Ili~~saHg~~ 581 (946)
++..+.+.++++++++++|.+... +..++|+++...++.++. .|.. .+|. ...+.|+++...|.++
T Consensus 57 ~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~ 136 (432)
T 3a9z_A 57 RKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSI 136 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhH
Confidence 345567889999999999987433 455666766655555542 2221 2331 0114666676666665
Q ss_pred HHH----HHHcCCEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcC-------
Q 002263 582 PAT----AAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG------- 648 (946)
Q Consensus 582 ~~~----a~~~G~~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g------- 648 (946)
... +...|++++.+|+++ ++.+|+++|+++++ +++++|++++|+ .+|.+. ++++|.++|+++|
T Consensus 137 ~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~~~~i~~l~~~~~~~~~~~~ 212 (432)
T 3a9z_A 137 RLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR---PTTCLVTIMLANNETGVIM-PISEISRRIKALNQIRAASG 212 (432)
T ss_dssp HHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC---TTEEEEECCSBCTTTCBBC-CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc---CCceEEEEECcccCccccc-CHHHHHHHHHhcCccccccc
Confidence 433 344799999999976 78899999999996 689999999995 689998 7999999999999
Q ss_pred ---CEEEEecccccccccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEeccc-CCCCCCCccccCCCCCCCCCC
Q 002263 649 ---GQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKS 724 (946)
Q Consensus 649 ---~ll~vD~a~~~a~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~lp~~~v~~~~d~~~~~~~ 724 (946)
+++++|+++..+... .....+++|+++.++||+| ||++|++++++++ ...+.....+... .+...
T Consensus 213 ~~~~~livDea~~~~~~~-~~~~~~~~d~~~~s~~K~~-------g~~~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 281 (432)
T 3a9z_A 213 LPRVLVHTDAAQALGKRR-VDVEDLGVDFLTIVGHKFY-------GPRIGALYVRGVGKLTPLYPMLFGGGQ---ERNFR 281 (432)
T ss_dssp CCCCEEEEECTTTTTTSC-CCHHHHCCSEEEEEGGGTT-------CCSCEEEEETTBTTTBCCCCSCCSSCG---GGGTS
T ss_pred CCceEEEEEchhhhCCcc-cChhhcCCCEEEEehhHhc-------CCcceEEEEccccccCCcCceeecCCc---ccccc
Confidence 999999987432110 0112358999999999976 3668999998765 3323211111100 00001
Q ss_pred CCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC---CceeeeEEEeccc
Q 002263 725 QPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN---GTVAHEFIVDLRG 799 (946)
Q Consensus 725 ~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~---~~~~~e~v~~~~~ 799 (946)
.++.+ ......+.+.+..+ .+++.+..++...+++++.++|+++ +.+.+.++. ....+.+.|.+..
T Consensus 282 ~~~~~--------~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (432)
T 3a9z_A 282 PGTEN--------TPMIAGLGKAADLV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQG 352 (432)
T ss_dssp CSCCC--------HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECS
T ss_pred CCCcC--------HHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCC
Confidence 11111 11122222333333 3467777788888999999999874 444322210 0111123344431
Q ss_pred ccccCCCCHHHHHHHHH----HCCcccCCC------------CCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 800 LKNTAGIEPEDVAKRLM----DYGFHGPTM------------SWP---VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 800 ~~~~~g~~~~~i~~~L~----~~Gi~~~~~------------~~p---~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.+.+..++.+.|. +.|+.+... +.+ ..+.+||++...+|++|+++++++|+++++++
T Consensus 353 ----~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~ 428 (432)
T 3a9z_A 353 ----SQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL 428 (432)
T ss_dssp ----TTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1235566666552 223322110 111 13789999998889999999999999998765
Q ss_pred HH
Q 002263 861 AQ 862 (946)
Q Consensus 861 ~~ 862 (946)
++
T Consensus 429 ~~ 430 (432)
T 3a9z_A 429 EG 430 (432)
T ss_dssp HS
T ss_pred cC
Confidence 53
No 119
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.78 E-value=2.6e-19 Score=208.18 Aligned_cols=285 Identities=14% Similarity=0.091 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC--C
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT--D 598 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~--~ 598 (946)
.+.++++++++ +|.+...+.+++|++++.++++++. +++++|+++...|.++...+.+.|++++.++. +
T Consensus 58 ~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~--------~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~ 128 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFS--------QKKGDILMARNVHKSVLHALDISQQEGHFIETHQS 128 (446)
T ss_dssp HHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTT--------TSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEEC
T ss_pred HHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhc--------CCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeec
Confidence 36789999999 9987434556666666654444331 25688999999998888888999999999988 6
Q ss_pred CC----CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccccc----CCCcc
Q 002263 599 AK----GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT----SPGYI 670 (946)
Q Consensus 599 ~~----g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~----~pg~~ 670 (946)
++ +.+|+++| ++ +++++|++++||++|.+. |+++|+++||++|+++++|+|+.. ...+. ....+
T Consensus 129 ~~~~~~~~~d~~~l---~~---~~~~~v~~~~~n~~G~~~-~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~ 200 (446)
T 2x3l_A 129 PLTNHYNKVNLSRL---NN---DGHKLVVLTYPNYYGETF-NVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNY 200 (446)
T ss_dssp TTTSSEEEEEC-------------CCEEEEESSCTTSCCC-CHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGG
T ss_pred cccCcCCCCCHHHH---cC---CCceEEEEECCCCCeEec-CHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHc
Confidence 55 56888887 33 678999999999999998 799999999999999999998753 22221 12346
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
|+|+++.|+||+++ |+.|+|++.+++++.+..+-...+. . ..+ .+ + +...++...+.+..
T Consensus 201 g~Di~~~S~~K~l~-----~~~g~g~l~~~~~~i~~~~~~~~~~--------~-~~~---~s-~--~~~~~aal~~a~~~ 260 (446)
T 2x3l_A 201 QADYVVQSFHKTLP-----ALTMGSVLYIHKNAPYRENIIEYLS--------Y-FQT---SS-P--SYLIMASLESAAQF 260 (446)
T ss_dssp TCSEEEECHHHHSS-----SCTTCEEEEEETTCTTHHHHHHHHH--------H-HSC---SS-C--CHHHHHHHHHHHHH
T ss_pred CCCEEEECCccccc-----cccccEEEEEcCCcCCHHHHHHHHH--------H-HcC---CC-c--hHHHHHHHHHHHHH
Confidence 89999999999873 4457899999887654101000000 0 000 11 1 11122222223344
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCC
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVP 830 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~ 830 (946)
+...|..+..++...++++++++ .+.+.- +.++. .+.++++ +.+..++.++|.++||.+... ..
T Consensus 261 l~~~g~~~~~~~~~~l~~~l~~~---g~~~~~--~~~~~--~l~i~~~------~~~~~~l~~~L~~~GI~v~~~---g~ 324 (446)
T 2x3l_A 261 YKTYDSTLFFAKRAQLIECLENK---GFEMLQ--VDDPL--KLLIKYE------GFTGHDIQNWFMNAHIYLELA---DD 324 (446)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHH---TCEEEE--CSSTT--EEEEECT------TSCHHHHHHHHHHTTEEESEE---CS
T ss_pred HHHhCHHHHHHHHHHHHHHHHHc---CCEECc--CCCCe--EEEEEeC------CcCHHHHHHHHHHCCCEEEec---CC
Confidence 44444444555566667777766 333321 11222 1556653 467889999999999987411 23
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 831 GTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 831 ~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+|++++..+|++|+ +++++|+++.++
T Consensus 325 ~~iRi~~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 325 YQALAILPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp SCEEEECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred CEEEEEeecCCCHHHH-HHHHHHHHHHHh
Confidence 6899999988899999 999999988654
No 120
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.78 E-value=4.6e-18 Score=195.08 Aligned_cols=285 Identities=15% Similarity=0.116 Sum_probs=193.5
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
..++++++++++|.+.. +..++|+++++.++ +.+. +++++|+++...|+++...+...|.+++.++.
T Consensus 106 ~~~l~~~la~~~g~~~~-i~~~sGt~a~~~~l---~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~---- 172 (409)
T 3kki_A 106 KPMIEKRLAKFTGFDEC-LLSQSGWNANVGLL---QTIC-----QPNTNVYIDFFAHMSLWEGARYANAQAHPFMH---- 172 (409)
T ss_dssp SCHHHHHHHHHHTCSEE-EEESCHHHHHHHHH---HHHC-----CTTCEEEEETTSCHHHHHHHHHTTCEEEEECT----
T ss_pred HHHHHHHHHHHhCCCeE-EEecchHHHHHHHH---HHhc-----CCCCEEEECCCcCHHHHHHHHHcCCeEEEecC----
Confidence 34678899999998864 55677776654443 3321 25789999999998888888899999998875
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CC------CccCCC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP------GYIGAD 673 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~p------g~~GaD 673 (946)
.|+++|++++++ .++++|++++|+ .+|.+. ++++|+++|++||+++++|+++.....+.. .+ ...+.|
T Consensus 173 -~d~~~le~~l~~--~~~~~vi~~~~~nptG~~~-~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~d 248 (409)
T 3kki_A 173 -NNCDHLRMLIQR--HGPGIIVVDSIYSTLGTIA-PLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVH 248 (409)
T ss_dssp -TCHHHHHHHHHH--HCSCEEEEESBCTTTCCBC-CHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCS
T ss_pred -CCHHHHHHHHHh--cCCeEEEECCCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCC
Confidence 689999999984 246889999884 689988 699999999999999999998742211110 00 112579
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+++.+++|+|+. + .|++++++++.+.+....... ...+. .+...++++.+.+..+..
T Consensus 249 i~~~s~sK~~~~------~-gg~v~~~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~aa~~aal~~~~~ 305 (409)
T 3kki_A 249 FMTASLAKTFAY------R-AGAIWCNNEVNRCVPFISYPA--------------IFSST--LLPYEAAGLETTLEIIES 305 (409)
T ss_dssp EEEEESSSTTCS------S-CEEEEESSSGGGTHHHHCHHH--------------HHSBC--CCHHHHHHHHHHHHHHHH
T ss_pred EEEeecchhhCC------C-ceEEEECHHHHHHHHHhCcCc--------------cccCC--CcHHHHHHHHHHHHHHhc
Confidence 999999999852 2 488988887766542110000 00000 012222333344444432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC----
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP---- 828 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p---- 828 (946)
. .+..++...+++++.+.|++. +.+. + .+.. +.+.++. ..+..++.++|.++|+.+....+|
T Consensus 306 ~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~-~~~~---~~~~~~~-----~~~~~~~~~~L~~~Gv~v~~~~~~~~~~ 372 (409)
T 3kki_A 306 A--DNRRQHLDRMARKLRIGLSQLGLTIR--S-ESQI---IGLETGD-----ERNTEKVRDYLESNGVFGSVFCRPATSK 372 (409)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHTTTCCCC--C-SSSE---EEEEEES-----HHHHHHHHHHHHHTTEECEEECTTSSCT
T ss_pred C--HHHHHHHHHHHHHHHHHHHHcCCccC--C-CCCE---EEEEeCC-----HHHHHHHHHHHHHCCceEeeeCCCCcCC
Confidence 2 345556667889999999875 4443 2 1222 3344431 124568999999999987544333
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..+.+||+++..+|++||++++++|+++++.
T Consensus 373 ~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 373 NKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp TCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 1368999999999999999999999988654
No 121
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.78 E-value=4.8e-18 Score=193.33 Aligned_cols=301 Identities=15% Similarity=0.135 Sum_probs=194.9
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|.+ ...+. +++|+++. .++++.+. .++++|+++...|..+...+...|+++
T Consensus 68 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al---~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 139 (385)
T 1b5p_A 68 AGIPELREALAEKFRRENGLSVTPEETIVTVGGSQAL---FNLFQAIL-----DPGDEVIVLSPYWVSYPEMVRFAGGVV 139 (385)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHH---HHHHHHHC-----CTTCEEEEEESCCTHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHH---HHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcCCEE
Confidence 566677777777777777754 33333 34444444 33344431 256889999988877777788999999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc-cc
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 665 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g-l~ 665 (946)
+.+++++ ++.+|+++|+++++ +++++|++++| |.+|.+. .++++|+++|+++|+++++|+++... ..+ ..
T Consensus 140 ~~v~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 216 (385)
T 1b5p_A 140 VEVETLPEEGFVPDPERVRRAIT---PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF 216 (385)
T ss_dssp EEEECCGGGTTCCCHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC
T ss_pred EEeecCcccCCCCCHHHHHHhcC---CCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 9999975 35799999999986 67999999999 4689874 25999999999999999999986421 111 11
Q ss_pred CCCcc--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHH
Q 002263 666 SPGYI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 666 ~pg~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~ 743 (946)
....+ +.++++.+++|+|+.| |.++|++++++++.+.+... +...+.+.+ .....+
T Consensus 217 ~~~~~~~~~~i~~~s~SK~~~~~----G~RiG~~~~~~~~~~~l~~~------------~~~~~~~~~------~~~~~a 274 (385)
T 1b5p_A 217 SPGRVAPEHTLTVNGAAKAFAMT----GWRIGYACGPKEVIKAMASV------------SRQSTTSPD------TIAQWA 274 (385)
T ss_dssp CGGGTCTTTEEEEEESTTTTTCG----GGCCEEEECCHHHHHHHHHH------------HHTTTCSCC------HHHHHH
T ss_pred CHHHcCCCCEEEEEechhhcCCc----ccceEEEEeCHHHHHHHHHH------------HhhccCCCC------HHHHHH
Confidence 11222 4578888999998533 55699999887655433110 000111111 111112
Q ss_pred HHHHHHH--HcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 744 SYTYIAM--MGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 744 a~a~l~~--lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
+.+++.. .+.+.+.+..++...+.+++.+.|++. .+.+..+.+.++ ++++++. .+.+..++.++|.++||.
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~~~~~----~~~~~~~l~~~l~~~gv~ 347 (385)
T 1b5p_A 275 TLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFY--VLMDTSP----IAPDEVRAAERLLEAGVA 347 (385)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSBTTE--EEEECTT----TCSSHHHHHHHHHHTTEE
T ss_pred HHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEE--EEEecCC----CCCCHHHHHHHHHHCCeE
Confidence 2223322 134446666677777888999999875 322222222221 3445531 146788999999999998
Q ss_pred cC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 822 GP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 822 ~~-~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+. ...|...+++||++. ++++++++.++.|.++++
T Consensus 348 v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 348 VVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp CEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred EecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 63 233433589999987 688899998888876543
No 122
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.78 E-value=6.7e-18 Score=193.74 Aligned_cols=297 Identities=18% Similarity=0.187 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHH--HcCCEEEEE
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAA--MCGMKIVSV 595 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~--~~G~~vv~v 595 (946)
....+++++++++|.+...+..++|+++.++++ +.+. +++++|+++...|+.+.. ... ..+...+.+
T Consensus 77 ~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~---~~~~-----~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 148 (420)
T 3gbx_A 77 VEQLAIDRAKELFGADYANVQPHSGSQANFAVY---TALL-----QPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPY 148 (420)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHH---HHHC-----CTTCEEEEEEEC------------CHHHHSEEEEE
T ss_pred HHHHHHHHHHHHhCCCCceeEecCcHHHHHHHH---HHhc-----CCCCEEEecchhhcceeccchhhhhcccceeEEec
Confidence 344566899999999877676778876654443 3321 256899999888877432 122 234567777
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCC-ccCCC
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPG-YIGAD 673 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg-~~GaD 673 (946)
+.+.++.+|+++|++++++ .++++|++++|++ |... ++++|+++|++||+++++|+++......- ..+. ...+|
T Consensus 149 ~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~-~~~~-~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~d 224 (420)
T 3gbx_A 149 GIDESGKIDYDEMAKLAKE--HKPKMIIGGFSAY-SGVV-DWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAH 224 (420)
T ss_dssp EECTTCSCCHHHHHHHHHH--HCCSEEEECCTTC-CSCC-CHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSS
T ss_pred cCCccCCcCHHHHHHHHHh--cCCeEEEEecCcc-CCcc-CHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCC
Confidence 7787889999999999984 2578899988875 5555 79999999999999999999864332210 1111 12489
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEec---ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKK---HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~---~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
+++.++||+|+ ||.+|++++++ .+.+.+..... . ....++. ... ++++.+.+..
T Consensus 225 i~~~s~sK~~~------g~~gg~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~--~~~-~~a~~~a~~~ 281 (420)
T 3gbx_A 225 VVTTTTHKTLA------GPRGGLILAKGGDEELYKKLNSAVF-------------P-SAQGGPL--MHV-IAGKAVALKE 281 (420)
T ss_dssp EEEEESSGGGC------SCSCEEEEESSCCHHHHHHHHHHHC------------------CCCC--HHH-HHHHHHHHHH
T ss_pred EEEeecccCCC------CCCceEEEEcCCcHHHHHHhhhhcC-------------C-CCCCCcc--hhH-HHHHHHHHHH
Confidence 99999999983 45558898887 44433211000 0 0001100 111 1122223333
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC--
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-- 827 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~-- 827 (946)
...+++.+..++...+++++.+.|++. +.+...+. ..+.+.+++.. .+.+...+.+.|.++||.+.....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~v~~~~~~~ 354 (420)
T 3gbx_A 282 AMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGT---ENHLFLLDLVD----KNLTGKEADAALGRANITVNKNSVPN 354 (420)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC---SSSEEEEECGG----GTCCHHHHHHHHHHTTEECEEECCTT
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCC---CCeEEEEEcCC----CCCCHHHHHHHHHHCCcEeccccCCC
Confidence 445667777888889999999999874 44422111 12235566542 246788899999999998643111
Q ss_pred ----C-CCCEEEEEcCCC----CCHHHHHHHHHHHHHHHHH
Q 002263 828 ----P-VPGTLMIEPTES----ESKEELDRYCDALISIREE 859 (946)
Q Consensus 828 ----p-~~~~lri~~t~~----~t~~eid~~~~aL~~i~~e 859 (946)
| .+..+||+++.. .+++++++++++|++++++
T Consensus 355 ~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 355 DPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp CSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 1 235699998654 5689999999999988654
No 123
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.78 E-value=2.1e-18 Score=195.41 Aligned_cols=297 Identities=14% Similarity=0.139 Sum_probs=190.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCCc--c-c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDS--F-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~--~-~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|.+. . . +..++|+++... +++.+. .++++|+++...|..+...+...|.+
T Consensus 63 ~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~---~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 134 (376)
T 2dou_A 63 SCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAH---LLLALT-----EPEDLLLLPEVAYPSYFGAARVASLR 134 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHH---HHHHHC-----CTTCEEEEESSCCHHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH---HHHHhc-----CCCCEEEECCCCcHhHHHHHHHcCCE
Confidence 3554555555555555558751 2 3 444555555433 334331 24688999888776666678889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccccc-cc-ccC
Q 002263 592 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG-LTS 666 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l~~ 666 (946)
++.+|.+.+..+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.... .+ ...
T Consensus 135 ~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 211 (376)
T 2dou_A 135 TFLIPLREDGLADLKAVPEGVW---REAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPS 211 (376)
T ss_dssp EEEECBCTTSSBCGGGSCHHHH---HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCC
T ss_pred EEEeeCCCCCCCCHHHHHHhhc---cCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCC
Confidence 9999983334689999999997 678999999885 6898852 48899999999999999999874211 11 001
Q ss_pred C----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHH
Q 002263 667 P----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 667 p----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
+ +..+.++++.++||+|+. +|.++|++++++++.+.+..... . ...+.+ .....
T Consensus 212 ~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~~------------~--~~~~~~----~~~~~ 269 (376)
T 2dou_A 212 PLALPGAKERVVELFSLSKSYNL----AGFRLGFALGSEEALARLERVKG------------V--IDFNQY----AGVLR 269 (376)
T ss_dssp GGGSTTGGGTEEEEEEHHHHHTC----GGGCCEEEEECHHHHHHHHHHHH------------H--HCCCSC----HHHHH
T ss_pred hhhcCCCCCcEEEEecchhhcCC----hhheeEEEecCHHHHHHHHHHHH------------h--cccCCC----HHHHH
Confidence 1 123567888899999853 35678999988776554321000 0 001111 12222
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 822 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~ 822 (946)
++.+++.. +.+.+.+..++...+++++.+.|++. +.+..+.+..+ +.++++ .+.+..++.++|.++||.+
T Consensus 270 a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~l~~~gi~v 339 (376)
T 2dou_A 270 MGVEALKT-PKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMY--LWGRLP-----EGVDDLEFGLRLVERGVAL 339 (376)
T ss_dssp HHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSE--EEEECC-----TTCCHHHHHHHHHHTTEEC
T ss_pred HHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEE--EEEECC-----CCCCHHHHHHHHHHCCEEE
Confidence 23333332 34556677777778889999999875 32222222221 345654 2457789999999999986
Q ss_pred CCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 823 PTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 823 ~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
... .|. ..+++||+++. ++++++++++.|++++
T Consensus 340 ~~g~~f~~~~~~~~Ris~~~--~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 340 APGRGFGPGGKGFVRIALVR--PLEELLEAAKRIREAL 375 (376)
T ss_dssp EEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred cCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 432 232 25789999974 7899999999987653
No 124
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.78 E-value=2.2e-17 Score=190.67 Aligned_cols=294 Identities=15% Similarity=0.120 Sum_probs=200.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc--ccc---CCC-------------CEEEEcCCCCH
Q 002263 93 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN--IQK---GKK-------------KTFIIASNCHP 154 (946)
Q Consensus 93 ~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~--~~~---~~g-------------d~vvv~~~~Hp 154 (946)
.+++..+.+.++++.+|+++|.++.++.+++|+|.+++.++.++. +.+ ++| ++|+++..+|+
T Consensus 55 ~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~ 134 (432)
T 3a9z_A 55 AGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHD 134 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcch
Confidence 355667788899999999999988889999999988887766542 000 144 58999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEeccc---------cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCC---------
Q 002263 155 QTIDICITRADGFDIKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--------- 214 (946)
Q Consensus 155 s~~~~~~~~a~~~gi~v~~~~~~---------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~g--------- 214 (946)
++...+..+++..|++++.++.+ +|++ +++++++|++++| |.+|.+.|+++|.++|+++|
T Consensus 135 s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~ 214 (432)
T 3a9z_A 135 SIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLP 214 (432)
T ss_dssp HHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCC
Confidence 99999887777779999888753 3445 6778999999998 67999999999999999999
Q ss_pred -cEEEEEecCccccCCC-CCCCccceEEEeccccccccCCCCCCceEEEEEchhh-hhcCCCceEeEeecCCCCcceEEe
Q 002263 215 -VKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 215 -al~~v~a~~~al~~l~-~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~-~~~lp~~~~G~s~d~~g~~~~~l~ 291 (946)
+++++|. ..+.+... +..++++|+++.|.+|+. ||.+|+++++++. ...+.+...| +.
T Consensus 215 ~~~livDe-a~~~~~~~~~~~~~~~d~~~~s~~K~~------g~~~G~~~~~~~~~~~~~~~~~~~------~~------ 275 (432)
T 3a9z_A 215 RVLVHTDA-AQALGKRRVDVEDLGVDFLTIVGHKFY------GPRIGALYVRGVGKLTPLYPMLFG------GG------ 275 (432)
T ss_dssp CCEEEEEC-TTTTTTSCCCHHHHCCSEEEEEGGGTT------CCSCEEEEETTBTTTBCCCCSCCS------SC------
T ss_pred ceEEEEEc-hhhhCCcccChhhcCCCEEEEehhHhc------CCcceEEEEccccccCCcCceeec------CC------
Confidence 9999943 33444322 113468999999884332 2558999999875 3333222211 00
Q ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEE--cCC----CCc-
Q 002263 292 MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEV--QGL----PFF- 363 (946)
Q Consensus 292 l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~--~~~----~~~- 363 (946)
+..+++.+|.|.. ...++.+++ .++ .++++++.++..+++++|.+.|+++ | +++ ..+ ...
T Consensus 276 -----~~~~~~~~~~~~~---~~~a~~aal--~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~ 343 (432)
T 3a9z_A 276 -----QERNFRPGTENTP---MIAGLGKAA--DLV-SENCETYEAHMRDIRDYLEERLEAEFG-KRIHLNSRFPGVERLP 343 (432)
T ss_dssp -----GGGGTSCSCCCHH---HHHHHHHHH--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHG-GGEEESSCCTTCCBCT
T ss_pred -----ccccccCCCcCHH---HHHHHHHHH--HHH-HhhHHHHHHHHHHHHHHHHHHHHhccC-CcEEEeCCCCcccCCC
Confidence 1113445666653 333444444 332 3578899999999999999999885 5 433 222 112
Q ss_pred CeEEEecCC----HHHHHHHHH----HcCCeeee------------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 364 DTVKVKCAD----AHAIASAAY----KIEMNLRV------------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 364 ~~~~i~~~~----~~~v~~~L~----~~GI~~~~------------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.|.+.+ ..++.+.|. +.|+.+.. ...+.+|+|++.++|++|+++++++|+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~ 423 (432)
T 3a9z_A 344 NTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQ 423 (432)
T ss_dssp TEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 234444432 555655542 12332211 0137899999999999999999999973
No 125
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.78 E-value=3.1e-18 Score=191.99 Aligned_cols=296 Identities=13% Similarity=0.087 Sum_probs=193.2
Q ss_pred cHHHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH--HHHHcCCEEE
Q 002263 517 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--TAAMCGMKIV 593 (946)
Q Consensus 517 G~~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~--~a~~~G~~vv 593 (946)
|..+...++++++++++|.+.. .+..++|+++...++.+++ .++++|+++...|..+.. .+...|++++
T Consensus 46 g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 117 (359)
T 1svv_A 46 GQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL--------RPWEAVIATQLGHISTHETGAIEATGHKVV 117 (359)
T ss_dssp TCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC--------CTTEEEEEETTSHHHHSSTTHHHHTTCCEE
T ss_pred cccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh--------CCCCEEEEcccchHHHHHHHHHhcCCCeeE
Confidence 4446677899999999997753 3556677766654444332 245789999887765554 3778899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhc----CCCeEEEEEeCCCccccccc--CHHHHHHHHHHcCCEEEEeccccc-ccccccC
Q 002263 594 SVGTDAKGNINIEELRKAAEAN----RDNLSTLMVTYPSTHGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVGLTS 666 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~~----~~~t~~vvvt~Pn~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl~~ 666 (946)
.+|.+ ++.+|+++|++++++. +.++++|++++||.+|.+.+ ++++|+++|+++|+++++|+++.. +++....
T Consensus 118 ~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 196 (359)
T 1svv_A 118 TAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN 196 (359)
T ss_dssp EECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC
T ss_pred EEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc
Confidence 99986 7889999999999742 12489999999988898862 399999999999999999998721 1121111
Q ss_pred CCc-----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 667 PGY-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 667 pg~-----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
... .+.|++++++||+. |..|.|++++++++.+.+....... . ..... +....+
T Consensus 197 ~~~~~~~~~~~d~~~~s~~K~g------~~~~~g~l~~~~~~~~~~~~~~~~~-----------~-~~~~~---~~~~~~ 255 (359)
T 1svv_A 197 DLTLADIARLTDMFYIGATKAG------GMFGEALIILNDALKPNARHLIKQR-----------G-ALMAK---GWLLGI 255 (359)
T ss_dssp CCCHHHHHHHCSEEEEECTTTT------CSSCEEEEECSGGGCTTHHHHHHHT-----------T-CCCTT---THHHHH
T ss_pred chhhhhhhhcCCEEEEecccCC------CCCceEEEEEcccHHHHHHHHHhcC-----------C-ccccc---chhhHH
Confidence 111 36899999999963 2236789998887765542110000 0 00000 011111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-Cc
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GF 820 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi 820 (946)
+ ....+..+++.+..++...+++++.+.| +...+.+.++.+..+ +.++++ .++.++|.++ |+
T Consensus 256 --~--~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~--~~~~~~----------~~~~~~l~~~~gi 318 (359)
T 1svv_A 256 --Q--FEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQ--LFPILE----------NTMIAELNNDFDM 318 (359)
T ss_dssp --H--HHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSE--ECBEEE----------HHHHHHHTTTEEC
T ss_pred --H--HHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccce--EEEEcC----------HHHHHHHHHhcCE
Confidence 1 1223555667777778888999999999 432222212222211 223321 4789999988 99
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+........+.+|++++...+++|+++++++|++++++
T Consensus 319 ~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 319 YTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp EEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred EEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 872110012468999998889999999999999987655
No 126
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.78 E-value=3.9e-18 Score=193.53 Aligned_cols=292 Identities=13% Similarity=0.062 Sum_probs=194.3
Q ss_pred HHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC---
Q 002263 523 NNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--- 598 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~--- 598 (946)
.++++.+++++|.+... +..++|+++...+ ++.+. .++++|+++...|..+...++..|++++.++.+
T Consensus 64 ~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~---~~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 135 (381)
T 1v2d_A 64 PALREALAEEFAVEPESVVVTSGATEALYVL---LQSLV-----GPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP 135 (381)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESSHHHHHHHH---HHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEET
T ss_pred HHHHHHHHHhcCCChhhEEEcCChHHHHHHH---HHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCC
Confidence 46778888999987533 4455666555433 33321 256889999988888888889999999999987
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccccccccccCC--C--ccC
Q 002263 599 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--G--YIG 671 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p--g--~~G 671 (946)
+++.+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++....-+-..+ . ..+
T Consensus 136 ~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~ 212 (381)
T 1v2d_A 136 EGFRLDLSALEKALT---PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPE 212 (381)
T ss_dssp TEEECCHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTT
T ss_pred ccCCcCHHHHHHhcC---cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCC
Confidence 457899999999986 689999999995 6888752 49999999999999999999864211111111 1 247
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
.|+++.++||+|+.| |.++|++++++++.+.+.... . . ...+. +.....++.+.|...
T Consensus 213 ~~~~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~--~----------~--~~~~~----~~~~~~a~~~~l~~~ 270 (381)
T 1v2d_A 213 RTFTVGSAGKRLEAT----GYRVGWIVGPKEFMPRLAGMR--Q----------W--TSFSA----PTPLQAGVAEALKLA 270 (381)
T ss_dssp TEEEEEEHHHHTTCG----GGCCEEEECCTTTHHHHHHHH--H----------H--HTSSC----CHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhcCCc----ccceEEEEeCHHHHHHHHHHH--h----------h--cccCC----CcHHHHHHHHHHhCc
Confidence 899999999998533 466899999877655432100 0 0 00111 111222233344432
Q ss_pred c-HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC
Q 002263 752 G-SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP 828 (946)
Q Consensus 752 G-~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p 828 (946)
. .+++.+..++...+++++.+.|++. +.+. .+.+.. -+.++++. .+ +.+.|.++||.+.. ..|.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~--~~~~~~~~------~~---~~~~l~~~gi~v~~g~~~~ 337 (381)
T 1v2d_A 271 RREGFYEALREGYRRRRDLLAGGLRAMGLRVY--VPEGTY--FLMAELPG------WD---AFRLVEEARVALIPASAFY 337 (381)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE--CCSBSS--EEEEECTT------CC---HHHHHHHTCEECEEGGGGC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHCCCEec--CCCcce--EEEEecCh------Hh---HHHHHHhCCEEEecchHhC
Confidence 1 4567777777888999999999874 4442 222222 13456541 22 67778899998642 2221
Q ss_pred ----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 829 ----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 829 ----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+++||+++. ++++++++++.|.+++++.++
T Consensus 338 ~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 338 LEDPPKDLFRFAFCK--TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp SSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC-----
T ss_pred CCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhccc
Confidence 25789999986 899999999999999888766
No 127
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.78 E-value=2.7e-17 Score=191.18 Aligned_cols=297 Identities=20% Similarity=0.218 Sum_probs=193.4
Q ss_pred HHHHHH-HHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-----HHHcCCEEEE
Q 002263 521 MFNNLG-EWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVS 594 (946)
Q Consensus 521 ~~~el~-~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-----a~~~G~~vv~ 594 (946)
.+.++. +++++++|.+.+.+++++|++++++++.++. .++++|+++...|+.+... ....+..++.
T Consensus 91 ~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~ 162 (447)
T 3h7f_A 91 VVENLARDRAKALFGAEFANVQPHSGAQANAAVLHALM--------SPGERLLGLDLANGGHLTHGMRLNFSGKLYENGF 162 (447)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHC--------CTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEE
T ss_pred HHHHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhc--------CCCCEEEecCcccccccchhhhhhhcCCeeEEEE
Confidence 344555 8999999999876768888877655444332 2568999998888764221 2234567778
Q ss_pred EcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc--cc-cCCCcc
Q 002263 595 VGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--GL-TSPGYI 670 (946)
Q Consensus 595 v~~~-~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~--gl-~~pg~~ 670 (946)
++++ +++.+|+++|++++++ .++++|++++|++ +... ++++|+++|+++|+++++|+++..++. +. ..+. .
T Consensus 163 ~~~~~~~~~~d~~~l~~~i~~--~~~~~i~~~~~~~-~~~~-~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~ 237 (447)
T 3h7f_A 163 YGVDPATHLIDMDAVRATALE--FRPKVIIAGWSAY-PRVL-DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-P 237 (447)
T ss_dssp ECCCTTTCSCCHHHHHHHHHH--HCCSEEEEECSSC-CSCC-CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-T
T ss_pred cCcCcccCCcCHHHHHHHHHh--cCCeEEEEcCCCC-CCcc-CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-C
Confidence 8876 4578999999999964 3566777877764 2223 699999999999999999998743321 21 1222 3
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
++|+++.++||+| |||.+|++++++++.+.+..... . ....+ +. ...+++ +.+.+..
T Consensus 238 ~~di~~~s~sK~l------~G~~gG~i~~~~~~~~~l~~~~~------------~--~~~~~-~~-~~~~~a-~~~a~~~ 294 (447)
T 3h7f_A 238 HADVVSTTVHKTL------GGGRSGLIVGKQQYAKAINSAVF------------P--GQQGG-PL-MHVIAG-KAVALKI 294 (447)
T ss_dssp TCSEEEEESSGGG------CCCSCEEEEECGGGHHHHHHHHT------------T--TTCSS-CC-HHHHHH-HHHHHHH
T ss_pred CCcEEEecCCcCC------CCCCeEEEEECHHHHHHHhhhcC------------C--cccCC-cc-HHHHHH-HHHHHHH
Confidence 6899999999987 46777999988766544321000 0 00111 10 111222 2223334
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc------CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccC-
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH------YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP- 823 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~------~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~- 823 (946)
+..+++.+..++...+++++.+.|++. +.+...+. ..+.++++++. .+.+...+.+.|.++||.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~l~~~GI~v~~ 367 (447)
T 3h7f_A 295 AATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGT---DVHLVLVDLRD----SPLDGQAAEDLLHEVGITVNR 367 (447)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSC---SSSEEEEECTT----SSCCHHHHHHHHHHTTEECBC
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCC---CCCEEEEEcCC----CCCCHHHHHHHHHHCCeEEec
Confidence 444567778888889999999999875 44432111 22335677652 24577888888888899875
Q ss_pred ---CC--CCC-CCCEEEEEcCCC----CCHHHHHHHHHHHHHHHHHH
Q 002263 824 ---TM--SWP-VPGTLMIEPTES----ESKEELDRYCDALISIREEI 860 (946)
Q Consensus 824 ---~~--~~p-~~~~lri~~t~~----~t~~eid~~~~aL~~i~~e~ 860 (946)
.. ..| .++.+|+++... .+++|++++++.|.+++.+.
T Consensus 368 ~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 368 NAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp -------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred ccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 22 112 357899987654 57899999999999887543
No 128
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.78 E-value=6.4e-18 Score=195.34 Aligned_cols=318 Identities=13% Similarity=0.117 Sum_probs=195.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCC--EEEEcCCCCCCCHHHHHHcCC
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRN--VCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~--~Ili~~saHg~~~~~a~~~G~ 590 (946)
+|..++...+.+++.+..|.+ ... +.+++|+++.. ++++.+. +..+++ +|+++...|..+...+...|+
T Consensus 82 ~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~---~~~~~l~---~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~ 155 (437)
T 3g0t_A 82 DGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCF---VSFLVAN---RTHKNREYGTLFIDPGFNLNKLQCRILGQ 155 (437)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH---HHHHHHT---TSCTTCSCCEEEEESCCHHHHHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHH---HHHHHHh---cCCCCCccEEEEeCCCcHhHHHHHHHcCC
Confidence 455555656666666655644 333 44444554443 3334331 002456 899988877666667888999
Q ss_pred EEEEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccc-cccccc
Q 002263 591 KIVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVGLT 665 (946)
Q Consensus 591 ~vv~v~~~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl~ 665 (946)
+++.++++++ +.+|+++|+++++ .+++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.. ...+..
T Consensus 156 ~~~~v~~~~~~~~~d~~~l~~~l~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~ 233 (437)
T 3g0t_A 156 KFESFDLFEYRGEKLREKLESYLQ--TGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDY 233 (437)
T ss_dssp CCEEEEGGGGCTTHHHHHHHHHHT--TTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCC
T ss_pred EEEEEeecCCCCccCHHHHHHHHh--cCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCc
Confidence 9999999754 4689999999994 2688999999995 6888762 488899999999999999998742 111111
Q ss_pred CC-------C----ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCC-CCCCCccccCCC-CCC--CCCCCCCCCc
Q 002263 666 SP-------G----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGG-IPA--PEKSQPLGTI 730 (946)
Q Consensus 666 ~p-------g----~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~-~lp~~~v~~~~d-~~~--~~~~~~~~~i 730 (946)
.. . ..+.++++.++||+|+. .|.++|++.+++++.+ .++.-.-....+ ... ..........
T Consensus 234 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (437)
T 3g0t_A 234 SHPGEPLYQPSVANYTDNYILALSSSKAFSY----AGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSS 309 (437)
T ss_dssp CSTTSSCCCCCGGGTCSCEEEEEESTTTTSC----GGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHS
T ss_pred CcccccchhhccCCCCCcEEEEEcCccCCCC----ccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcC
Confidence 11 1 24567888999999853 3677999999877665 411000000000 000 0000000011
Q ss_pred ccCccchhhHHHHHHHHHHHHcHhh---HHHHHHHHHHHHHHHHHHHhcc-CCeee-----ccCCCceeeeEEEeccccc
Q 002263 731 AAAPWGSALILPISYTYIAMMGSKG---LTEASKIAILNANYMAKRLEKH-YPILF-----RGVNGTVAHEFIVDLRGLK 801 (946)
Q Consensus 731 ~~~~~g~~~~~~~a~a~l~~lG~eG---l~~~~~~~~~~a~~l~~~L~~~-~~v~~-----~~~~~~~~~e~v~~~~~~~ 801 (946)
+. +.....++.+++... .+. +.+..++...+++++.+.|++. +.+.+ ..+.+.. -+.++++
T Consensus 310 ~~----~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~--- 379 (437)
T 3g0t_A 310 GA----THSAQWGMAAMLKAC-NDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGF--YFTVGYK--- 379 (437)
T ss_dssp SS----CHHHHHHHHHHHHHH-HTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSS--EEEEEET---
T ss_pred CC----CHHHHHHHHHHHhCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeE--EEEEecC---
Confidence 11 122222333344332 222 6777777888899999999885 33220 0101212 1345553
Q ss_pred ccCCCCHHHHHHHHHHCCcccCCCC-CC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 802 NTAGIEPEDVAKRLMDYGFHGPTMS-WP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 802 ~~~g~~~~~i~~~L~~~Gi~~~~~~-~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+..++.++|.++||.+.... +. .++++||+++.. +++|+++++++|++++++
T Consensus 380 ---~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~-~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 380 ---GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLL-PESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp ---TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSS-CGGGHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 4678999999999999864322 21 127899999844 899999999999987653
No 129
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.78 E-value=6.2e-17 Score=186.02 Aligned_cols=275 Identities=13% Similarity=0.080 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+|+++|.+. +.++.+||+++.+++.++ .. +||+||++..+|+++...++..++..|++++++|.
T Consensus 83 ~~~~le~~lA~l~g~~~--~i~~ssGt~Ai~~al~~l-~~--~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~ 157 (415)
T 2fq6_A 83 THFSLQQAMCELEGGAG--CVLFPCGAAAVANSILAF-IE--QGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIG 157 (415)
T ss_dssp HHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHTT-CC--TTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCG
T ss_pred hHHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCH
Confidence 34567889999999863 667889997777666654 23 89999999999999999887666678999999875
Q ss_pred ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHh--CCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccC
Q 002263 177 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPM 251 (946)
Q Consensus 177 ~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~--~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~ 251 (946)
+++++ ++++|++|++.+| |.+|.+.|+++|+++||+ +|+++++|. .++.+....|-++|+|++++|+ |.|+++
T Consensus 158 ~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~-a~a~~~~~~p~~~g~Div~~S~sK~lg~~- 235 (415)
T 2fq6_A 158 ADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDN-TWAAGVLFKALDFGIDVSIQAATKYLVGH- 235 (415)
T ss_dssp GGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEEC-TTTTTTSSCGGGGTCSEEEEETTTTTTCS-
T ss_pred HHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEEC-CCcccccCCccccCCeEEEEeCccccCCC-
Confidence 55666 7889999999998 689999999999999999 999999953 4454444456679999999998 666432
Q ss_pred CCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH
Q 002263 252 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 331 (946)
Q Consensus 252 ~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl 331 (946)
|+.-+|++++++++++++.. .++..|+.+. +..+. +...+.+.+
T Consensus 236 --g~~~~G~l~~~~~~~~~l~~-------------------------~~~~~G~~~~----~~~a~-----~~~~~l~~l 279 (415)
T 2fq6_A 236 --SDAMIGTAVCNARCWEQLRE-------------------------NAYLMGQMVD----ADTAY-----ITSRGLRTL 279 (415)
T ss_dssp --SSCCCEEEEECTTTHHHHHH-------------------------HHHHTTCCCC----HHHHH-----HHHHHHHHH
T ss_pred --CCceEEEEEeCHHHHHHHHH-------------------------HHHhcCCCCC----HHHHH-----HHHhhhhHH
Confidence 12226899988776554410 0111232221 11111 111122344
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEE-E-cCC----C-----------CcCeEEEecCC---HHHHHHHHHHc---CCeee
Q 002263 332 KTIAQRVHGLAGTFALGLKKLGTVE-V-QGL----P-----------FFDTVKVKCAD---AHAIASAAYKI---EMNLR 388 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~g~~~-~-~~~----~-----------~~~~~~i~~~~---~~~v~~~L~~~---GI~~~ 388 (946)
....++..+++.++++.|++.+.++ + +.. + ....+.|.+++ ..+..+.+... +|.++
T Consensus 280 ~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s 359 (415)
T 2fq6_A 280 GVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYS 359 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEecc
Confidence 4555666778889999998863243 2 111 1 23456776654 23333333322 22221
Q ss_pred ---------e--------------e--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 389 ---------V--------------V--DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 ---------~--------------~--~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. . .++.||+|++..+++++|+++.++|..
T Consensus 360 ~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 360 WGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 0 1 247899999999999999999999964
No 130
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.78 E-value=8.7e-18 Score=190.35 Aligned_cols=321 Identities=12% Similarity=0.038 Sum_probs=209.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC----CcceEEcccHHHHHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP----MSNASLLDEGTAAAEAMAM 134 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~----~~~~sl~~~~Ta~~ea~~l 134 (946)
++.| |..+++.+.+.+.+. ...+ +.+.. .+...++++.++++++.. +.++.+++|+|.+++.++.
T Consensus 9 ~~p~--p~~~~~~v~~a~~~~---~~~~--~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~ 77 (385)
T 2bkw_A 9 LIPG--PIILSGAVQKALDVP---SLGH--TSPEF----VSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFAS 77 (385)
T ss_dssp CSSS--SCCCCHHHHHTTSCC---CCCT--TSHHH----HHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHH
T ss_pred ecCC--CcCchHHHHHHHhcc---cccc--CCHHH----HHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHH
Confidence 3455 455777776554432 2221 22221 234455677888888764 4678889999988888776
Q ss_pred HhccccCCCCEEEEcCCCC--HHHHHHHHHhhcCCCeEEEEecc-c--------cccc-cCC-CEeEEEEEcC-CCceee
Q 002263 135 CNNIQKGKKKTFIIASNCH--PQTIDICITRADGFDIKVVVSDL-K--------DIDY-KSG-DVCGVLVQYP-GTEGEV 200 (946)
Q Consensus 135 a~~~~~~~gd~vvv~~~~H--ps~~~~~~~~a~~~gi~v~~~~~-~--------~l~~-i~~-~t~~v~v~~p-n~~G~i 200 (946)
++....++||+|++.+..+ .+....+ +..|++++.++. + +|++ +++ ++++|++++| |.+|.+
T Consensus 78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 153 (385)
T 2bkw_A 78 NFILSKAPNKNVLVVSTGTFSDRFADCL----RSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVL 153 (385)
T ss_dssp HHSCTTCSCCEEEEECSSHHHHHHHHHH----HHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEE
T ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHH----HHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeE
Confidence 6531113789998875533 3322333 346888888776 2 3444 544 7899999987 789999
Q ss_pred cchHHHHHHHHhC--CcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhh-cC----
Q 002263 201 LDYGDFIKNAHAN--GVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKR-MM---- 271 (946)
Q Consensus 201 ~di~~i~~~a~~~--gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~-~l---- 271 (946)
.|+++|.++||++ |+++++|. ..+.+... +..++|+|++++|. |+|++ +||.|++++++++++ .+
T Consensus 154 ~~l~~i~~~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-----~~G~G~~~~~~~~~~~~l~~~~ 227 (385)
T 2bkw_A 154 SDLKAISQAIKQTSPETFFVVDA-VCSIGCEEFEFDEWGVDFALTASQKAIGA-----PAGLSISLCSSRFMDYALNDSK 227 (385)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEEC-TTTTTTSCCCTTTTTCSEEEEESSSTTCC-----CSCEEEEEECHHHHHHHTCHHH
T ss_pred cCHHHHHHHHHhhCCCCEEEEEC-ccccCCccccccccCceEEEecCcccccc-----CCcceEEEEcHHHHHHHHhhcc
Confidence 9999999999999 99999953 34444432 34668999999998 66743 356899999988776 55
Q ss_pred --CCceEeEeecCCCCcceEEecccccccccccc------cCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHH
Q 002263 272 --PGRIVGVSIDSSGKPALRVAMQTREQHIRRDK------ATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAG 343 (946)
Q Consensus 272 --p~~~~G~s~d~~g~~~~~l~l~tre~~irre~------aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~ 343 (946)
+.+..| +.. . .+ +....+.+. +|.|+ ....++.+++ .++...|++++.++..++++
T Consensus 228 ~~~~~~~~------~~~-~--~~--~~~~~~~~~~~~~~~~~~~~---~~~~a~~~al--~~~~~~~~~~~~~~~~~~~~ 291 (385)
T 2bkw_A 228 NGHVHGYF------SSL-R--RW--TPIMENYEAGKGAYFATPPV---QLINSLDVAL--KEILEEGLHKRWDLHREMSD 291 (385)
T ss_dssp HCCCSCST------TCH-H--HH--HHHHHHHHTTCCCCSSCCCH---HHHHHHHHHH--HHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCcee------ecH-H--HH--hhHHHhhhccCCCCCCCCCH---HHHHHHHHHH--HHHHHccHHHHHHHHHHHHH
Confidence 222111 000 0 00 000001111 34444 2333444444 44445578889999999999
Q ss_pred HHHHHH-hcCCCEEEcC-CC----CcCeEEEecCCHHHHHHHHHHcCCeeeee-----cCCeEEEE-ecc---CCCHHHH
Q 002263 344 TFALGL-KKLGTVEVQG-LP----FFDTVKVKCADAHAIASAAYKIEMNLRVV-----DSNTVTAS-FDE---TTTLEDV 408 (946)
Q Consensus 344 ~l~~~L-~~~g~~~~~~-~~----~~~~~~i~~~~~~~v~~~L~~~GI~~~~~-----~~~~lris-~~~---~~t~edi 408 (946)
++.+.| +++| +++.. .+ ....+.+.+++..++.++|.++||.++.. ..+.+|+| +.. .+|++|+
T Consensus 292 ~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i 370 (385)
T 2bkw_A 292 WFKDSLVNGLQ-LTSVSRYPSNMSAHGLTAVYVADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYM 370 (385)
T ss_dssp HHHHHHHTTTC-CEESSCSSSTTBCSSCEEEECSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHH
T ss_pred HHHHHHHHhcC-ceecccCcccccCCceEEEecCCHHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHH
Confidence 999999 8886 88874 21 23456677665778999999999988642 24689999 653 5799999
Q ss_pred HHHHHHHhC
Q 002263 409 DKLFIVFAG 417 (946)
Q Consensus 409 d~ll~~l~~ 417 (946)
++++++|+.
T Consensus 371 ~~~~~~l~~ 379 (385)
T 2bkw_A 371 KNCFDLIKL 379 (385)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999863
No 131
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.77 E-value=7.7e-18 Score=206.88 Aligned_cols=306 Identities=14% Similarity=0.109 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.+.+.++.+++++|.+...+.++++++++.++++++. .++++||++...|.++...+.+.|++++.++.+.+
T Consensus 206 ~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~--------~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~ 277 (755)
T 2vyc_A 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN 277 (755)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC
T ss_pred HHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC
Confidence 4678899999999998654555555555654444332 25689999999998888888899999999987643
Q ss_pred -----CCC-----CHHHHHHHHHhcCCCe--------EEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccc--
Q 002263 601 -----GNI-----NIEELRKAAEANRDNL--------STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA-- 660 (946)
Q Consensus 601 -----g~~-----D~e~L~~~i~~~~~~t--------~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a-- 660 (946)
|.+ |+++|+++++++ +++ +++++++||++|.+. |+++|+++||++|+++++|+|+...
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~-~~~k~~~~~~~klvil~~pn~~G~v~-dl~~I~~ia~~~~~~livDeA~~~~~~ 355 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYDGVCY-NAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHC-TTTGGGTTCCCSCEEEESSCTTSEEE-CHHHHHHHHTTTCSEEEEECTTCTTGG
T ss_pred ccccccccCcCCCCHHHHHHHHHhC-ccccccccCCCeEEEEECCCCCceec-CHHHHHHHHHHcCCEEEEECcCchhcc
Confidence 346 999999999753 234 388999999999998 8999999999999999999997421
Q ss_pred cccc---cCCCccC--CCE------EEeCCCcccccCCCCCCC-cceeEEEecc--cCCCCCCCccccCCCCCCCCCCCC
Q 002263 661 QVGL---TSPGYIG--ADV------CHLNLHKTFCIPHGGGGP-GMGPIGVKKH--LAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 661 ~~gl---~~pg~~G--aDi------~~~s~hK~f~~P~g~GGP-g~G~i~~~~~--l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
+... ..+. .| +|+ ++.|+||+++ || +.|++.+++. ..... . +... .....
T Consensus 356 ~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~------g~~~g~~i~~~~~~~~i~~~--~-~~~~-----~~~~~- 419 (755)
T 2vyc_A 356 FNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLN------ALSQASYIHVREGRGAINFS--R-FNQA-----YMMHA- 419 (755)
T ss_dssp GCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSS------CCTTCEEEEEECCBTCCCHH--H-HHHH-----HHHTS-
T ss_pred cCcccCCcchh-cCCcCCccCCCeEEEECcccccc------CcCCeeeeeecCcccccCHH--H-HHHH-----HHHhC-
Confidence 1111 1122 57 787 8999999873 44 4678888765 22100 0 0000 00000
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-----------CCeeeccC----------
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-----------YPILFRGV---------- 785 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-----------~~v~~~~~---------- 785 (946)
++++ +...++..-+.+..+..+|..+..++...++++++++|+++ +++..+..
T Consensus 420 ----s~sp--~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (755)
T 2vyc_A 420 ----TTSP--LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTY 493 (755)
T ss_dssp ----CSSC--CHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEE
T ss_pred ----CCCH--HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhcccccccccc
Confidence 0111 11222222233455555544667777888999999999763 22211000
Q ss_pred --------------------------------CCc-e--eeeEEEecccccc-----cCCCCHHHHHHHHHHCCcccCCC
Q 002263 786 --------------------------------NGT-V--AHEFIVDLRGLKN-----TAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 786 --------------------------------~~~-~--~~e~v~~~~~~~~-----~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
.+. . ...+.++++.+.. +.|+++.++.+.|.++||.+...
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~ 573 (755)
T 2vyc_A 494 DFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT 573 (755)
T ss_dssp EGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE
T ss_pred ccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec
Confidence 000 0 0123444442211 12577899999999999987543
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 826 SWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 826 ~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
. .+.+++.++..+|++++++++++|.++.++..
T Consensus 574 ~---~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 574 T---DFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp C---SSEEEEECCTTCCTTTTHHHHHHHHHHHHHHH
T ss_pred C---CCeEEEEECCCCCHHHHHHHHHHHHHHHHhhh
Confidence 3 58899999999999999999999999977654
No 132
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.77 E-value=3e-17 Score=188.59 Aligned_cols=295 Identities=16% Similarity=0.193 Sum_probs=184.9
Q ss_pred HHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCC---HHHHHHcCC--EEEEEcCCC
Q 002263 525 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN---PATAAMCGM--KIVSVGTDA 599 (946)
Q Consensus 525 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~---~~~a~~~G~--~vv~v~~~~ 599 (946)
.++++++++|.+...+.+++|+++.+.++.++ . +++++|+++...|+.+ .......|. +++.++.++
T Consensus 83 a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~---~-----~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 154 (425)
T 3ecd_A 83 AIERVKRLFNAGHANVQPHSGAQANGAVMLAL---A-----KPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR 154 (425)
T ss_dssp HHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH---C-----CTTCEEEEECC------------------CEEEEECCCT
T ss_pred HHHHHHHHhCCCCceeecCchHHHHHHHHHHc---c-----CCCCEEEEcccccccceecchhhhhcccceeeeecCCCc
Confidence 34788899999877666788887665444332 1 2568999998888762 222224454 566677664
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCcc-CCCEEE
Q 002263 600 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYI-GADVCH 676 (946)
Q Consensus 600 -~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~-GaDi~~ 676 (946)
++.+|+++|++++++ +++++|++++|++ |... ++++|+++|++||+++++|+++......- ..+..+ .+|+++
T Consensus 155 ~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~-~~~~-~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~ 230 (425)
T 3ecd_A 155 DTMLIDYDQVEALAQQ--HKPSLIIAGFSAY-PRKL-DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVT 230 (425)
T ss_dssp TTSSCCHHHHHHHHHH--HCCSEEEEECSCC-CSCC-CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEE
T ss_pred ccCccCHHHHHHHHhh--cCCcEEEEccccC-CCcC-CHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEE
Confidence 378999999999974 4678899988775 7776 79999999999999999999864322211 111211 379999
Q ss_pred eCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.++||+| +||.+|++++++ .+...+..... .+...+ +. .... +++.+.+.....++
T Consensus 231 ~s~sK~l------~g~~~g~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~-~~~~-~a~~~a~~~~~~~~ 287 (425)
T 3ecd_A 231 STTHKTL------RGPRGGFVLTNDEEIAKKINSAVF--------------PGLQGG-PL-MHVI-AGKAVAFGEALTDD 287 (425)
T ss_dssp EESSGGG------CCCSCEEEEESCHHHHHHHHHHHC-------------------C-CC-HHHH-HHHHHHHHHHTSHH
T ss_pred ecCCccc------CCCCcEEEEeCCHHHHHHHHhhhC--------------ccccCC-cc-HHHH-HHHHHHHHHHHHHh
Confidence 9999998 356678988874 44333211000 000001 10 1111 22223333444566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC------
Q 002263 756 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP------ 828 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p------ 828 (946)
+.+..++...+++++.+.|++. +.+..++. ..+.+.+++.. .+.+...+.+.|.++||.+....+|
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~ 360 (425)
T 3ecd_A 288 FKTYIDRVLANAQALGDVLKAGGVDLVTGGT---DNHLLLVDLRP----KGLKGAQVEQALERAGITCNKNGIPFDPEKP 360 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC---SSSEEEEECGG----GTCCHHHHHHHHHHTTEECEECCCTTCSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeccCCC---CceEEEEEeCC----CCCCHHHHHHHHHHcCCEecccccCCCCCCC
Confidence 7777788888999999999874 44432111 12335566542 2457889999999999987522222
Q ss_pred -CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHHHHH
Q 002263 829 -VPGTLMIEPTE----SESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 829 -~~~~lri~~t~----~~t~~eid~~~~aL~~i~~e~~ 861 (946)
..+.+|+++.. ..+++++++++++|++++++.+
T Consensus 361 ~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~~ 398 (425)
T 3ecd_A 361 TITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEALR 398 (425)
T ss_dssp TTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCccceeccchhheeccCCHHHHHHHHHHHHHHHhccc
Confidence 23589999544 4459999999999999988763
No 133
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.77 E-value=3.2e-18 Score=197.08 Aligned_cols=314 Identities=16% Similarity=0.151 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
++..++++.+++++|.+. .+..++|+++...+ ++.+ +..++++|+++...|.++...+...|++++.+++++
T Consensus 42 ~l~~~l~~~la~~~g~~~-~i~~~~gt~al~~~---~~~~----~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~ 113 (418)
T 2c81_A 42 SMERKFAKAFADFNGVPY-CVPTTSGSTALMLA---LEAL----GIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVEA 113 (418)
T ss_dssp CHHHHHHHHHHHHHTCSE-EEEESCHHHHHHHH---HHHT----TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT
T ss_pred HHHHHHHHHHHHHhCCCc-EEEeCCHHHHHHHH---HHHc----CCCCcCEEEECCCccHhHHHHHHHcCCEEEEEecCC
Confidence 346688899999999984 35566676555433 3332 112568899999988888888889999999999986
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccc-cccCCCccCCCEEEe
Q 002263 600 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHL 677 (946)
Q Consensus 600 -~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl~~pg~~GaDi~~~ 677 (946)
++.+|+++|+++++ +++++|++++| +|... ++++|.++|+++|+++++|+++..... .....+.++ |+.+.
T Consensus 114 ~~~~~d~~~l~~~i~---~~~~~v~~~~~--~G~~~-~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~ 186 (418)
T 2c81_A 114 DTYCIDPQLIKSAIT---DKTKAIIPVHL--FGSMA-NMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIG-DIGAF 186 (418)
T ss_dssp TTCSBCHHHHGGGCC---TTEEEECCBCC--TTCCC-CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSS-SEEEE
T ss_pred CCCCcCHHHHHHhhC---CCCeEEEEeCC--cCCcc-cHHHHHHHHHHCCCEEEEECcccccCccCCEeccccc-ceEEE
Confidence 68899999999996 68999988765 68887 899999999999999999998753211 001122233 66666
Q ss_pred CC--CcccccCCCCCCCcceeEEEe-cccCCCCCC-CccccC-CCC---CCCCCC--CCCCCcccCccchhhHHHHHHHH
Q 002263 678 NL--HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVST-GGI---PAPEKS--QPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 678 s~--hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~-~d~---~~~~~~--~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
++ ||+|+ +| .+|+++++ +++.+.+.. ...+.. ..+ ...... .++..+.+ ++.+.....++.
T Consensus 187 s~s~~K~~~-----~g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~aa~- 257 (418)
T 2c81_A 187 SCQQGKVLT-----AG-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQG--SNYCLSEFQSAI- 257 (418)
T ss_dssp ECCTTSSSC-----SS-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCC--CBCCCCHHHHHH-
T ss_pred eccCCcccC-----CC-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccC--cCCCcCHHHHHH-
Confidence 65 99984 23 56888885 454332210 000000 000 000000 00001110 000011111111
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeecc-CCC--c-eeeeEEEecccccccCCCCHHHHHHHHHHC-Ccc-
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRG-VNG--T-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFH- 821 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~-~~~--~-~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi~- 821 (946)
.....+++.+..++...+++++.+.|++...+...+ +.+ . .++.+.+.++.. ...+.+..++.++|.++ ||.
T Consensus 258 -~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~gI~~ 335 (418)
T 2c81_A 258 -LLDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPV-KFGGLNADQFCEILREKLNMGT 335 (418)
T ss_dssp -HHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGG-GTTTCCHHHHHHHHHHHHTCCT
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccc-cccccCHHHHHHHHHHcCCCCc
Confidence 112234566666777788999999998742332221 112 1 223444555410 00146789999999998 998
Q ss_pred --cCCCCCCC-------------------------------------CCEEEEEcCCCC-CHHHHHHHHHHHHHHHHH
Q 002263 822 --GPTMSWPV-------------------------------------PGTLMIEPTESE-SKEELDRYCDALISIREE 859 (946)
Q Consensus 822 --~~~~~~p~-------------------------------------~~~lri~~t~~~-t~~eid~~~~aL~~i~~e 859 (946)
+.....|. .+.||+++...+ |++|||+++++|++++++
T Consensus 336 ~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 336 FYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp TTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 54322110 148999999999 999999999999988764
No 134
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.77 E-value=8.9e-18 Score=194.01 Aligned_cols=300 Identities=10% Similarity=0.083 Sum_probs=194.5
Q ss_pred HHHHHHHHHhhC-----CCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 523 NNLGEWLCTITG-----FDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 523 ~el~~~la~l~G-----~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
.++++.++++++ .+... +++++|+++...+ ++.+. .++++|+++...|..+...+...|++++.++
T Consensus 99 ~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~---~~~l~-----~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~ 170 (427)
T 3dyd_A 99 LSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLC---LAVLA-----NPGQNILVPRPGFSLYKTLAESMGIEVKLYN 170 (427)
T ss_dssp HHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHH---HHHHC-----CTTCEEEEEESCCTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHH---HHHhc-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEe
Confidence 356677777776 44333 5556666555433 33321 2568899998888777777889999999999
Q ss_pred CCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEeccccc-ccccc--cCC
Q 002263 597 TDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMN-AQVGL--TSP 667 (946)
Q Consensus 597 ~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~-a~~gl--~~p 667 (946)
+++ ++.+|+++|+++++ +++++|++++| |.+|.+. + +++|+++|+++|+++++|+++.. +..+- ...
T Consensus 171 ~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~ 246 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLID---EKTACLIVNNPSNPCGSVF-SKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPL 246 (427)
T ss_dssp EEGGGTTEECHHHHHSSCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCG
T ss_pred cccccCCCCCHHHHHHHhc---cCCCEEEEECCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccH
Confidence 864 45789999999986 67999999999 5789987 6 99999999999999999998642 11111 111
Q ss_pred CccCCC---EEEeCCCcccccCCCCCCCcceeEEEecc-------cCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 668 GYIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKH-------LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 668 g~~GaD---i~~~s~hK~f~~P~g~GGPg~G~i~~~~~-------l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
..++.| +++.++||.|+. .|.++|++++++. +...+.. . .....+. +
T Consensus 247 ~~~~~~~~vi~~~S~sK~~~~----~G~riG~~~~~~~~~~~~~~i~~~l~~--~-------------~~~~~~~----~ 303 (427)
T 3dyd_A 247 ATLSTDVPILSCGGLAKRWLV----PGWRLGWILIHDRRDIFGNEIRDGLVK--L-------------SQRILGP----C 303 (427)
T ss_dssp GGGCSSCCEEEEEESTTTSSC----GGGCCEEEEEECSTTSSHHHHHHHHHH--H-------------HHHHCCS----C
T ss_pred HHhCCCCcEEEEeeccccCCC----cCcceEEEEecCcchhhHHHHHHHHHH--H-------------HhccCCC----C
Confidence 223434 556789998753 3667899998753 1111100 0 0000111 1
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 816 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~- 816 (946)
.....++.++|.....+.+.+..++...+++++.+.|+++..+.+..+.+..+ +.+.++.-....+.+..++.++|.
T Consensus 304 ~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~--~~~~l~~~~~~~~~~~~~~~~~l~~ 381 (427)
T 3dyd_A 304 TIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMY--LMVGIEMEHFPEFENDVEFTERLVA 381 (427)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTE--EEEEECGGGCTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEE--EEEecCHhhcCCCCCHHHHHHHHHH
Confidence 22233344555544566777777888888999999998753332212222222 233433101112356788999986
Q ss_pred HCCcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 817 ~~Gi~~~~-~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
++|+.+.. ..|..++++||+++ .++++|+++++.|.+++++.+
T Consensus 382 ~~gV~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 382 EQSVHCLPATCFEYPNFIRVVIT--VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp HHCEECEEGGGGTCTTEEEEESC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred HCCEEEECCcccCCCCeEEEEEC--CCHHHHHHHHHHHHHHHHHhh
Confidence 78998632 22333689999986 689999999999999887653
No 135
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.77 E-value=1.4e-17 Score=187.08 Aligned_cols=319 Identities=13% Similarity=0.117 Sum_probs=209.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCC--cceEEcccHHHHHHHHHHHh
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~--~~~sl~~~~Ta~~ea~~la~ 136 (946)
++.| |...|+.+.+.+.+. + . + +.++.. .+...++++.+++++|.+. .++.+++|||.+++.++.++
T Consensus 8 ~~~g--p~~~~~~v~~a~~~~--~-~--~-~~~~~~---~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~ 76 (366)
T 1m32_A 8 LTPG--PLTTSRTVKEAMLFD--S-C--T-WDDDYN---IGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSA 76 (366)
T ss_dssp CSSS--SCCCCHHHHHTTCCC--C-C--T-TSHHHH---TTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHS
T ss_pred ccCC--CcCCCHHHHHHHhhh--h-c--C-CCHHHH---HHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHh
Confidence 3555 445777777665542 1 1 1 112211 1345678899999999422 36888999998888877765
Q ss_pred ccccCCCCEEEEc-CCCCHHHH-HHHHHhhcCCCeEEEEecc--------ccccc-cCC--CEeEEEEEcC-CCceeecc
Q 002263 137 NIQKGKKKTFIIA-SNCHPQTI-DICITRADGFDIKVVVSDL--------KDIDY-KSG--DVCGVLVQYP-GTEGEVLD 202 (946)
Q Consensus 137 ~~~~~~gd~vvv~-~~~Hps~~-~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~--~t~~v~v~~p-n~~G~i~d 202 (946)
. . +||+|++. ...|++.. ..+ +..|++++.+++ +++++ +++ ++++|++.+| |.+|.+.|
T Consensus 77 ~-~--~gd~vi~~~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 149 (366)
T 1m32_A 77 L-G--PQDKVLIVSNGAYGARMVEMA----GLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP 149 (366)
T ss_dssp C-C--TTCCEEEEESSHHHHHHHHHH----HHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC
T ss_pred c-C--CCCeEEEEeCCCccHHHHHHH----HHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC
Confidence 3 2 77887755 48888743 332 234666766554 34555 432 5788888887 67999999
Q ss_pred hHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEee
Q 002263 203 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 280 (946)
Q Consensus 203 i~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~ 280 (946)
+++|.++||++|+++++|. ..+.+... +..++|+|++++|. |+|++ ++++|++++++++.+++....
T Consensus 150 l~~i~~l~~~~~~~li~De-a~~~~~~~~~~~~~~~di~~~s~~K~~~~-----~~g~G~~~~~~~~~~~~~~~~----- 218 (366)
T 1m32_A 150 IDEVGALAHRYGKTYIVDA-MSSFGGIPMDIAALHIDYLISSANKCIQG-----VPGFAFVIAREQKLAACKGHS----- 218 (366)
T ss_dssp HHHHHHHHHHHTCEEEEEC-TTTTTTSCCCTTTTTCSEEEEESSSTTCC-----CSSEEEEEEEHHHHTTCTTCC-----
T ss_pred HHHHHHHHHHcCCEEEEEC-CccccCcCccccccCccEEEecCcccccC-----CCceEEEEECHHHHHhhcCCC-----
Confidence 9999999999999999943 34444332 23457899999997 76753 345799999999887774311
Q ss_pred cCCCCcceEEecccccccc----cccccCCCccchHHHHHHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHhcCCCE
Q 002263 281 DSSGKPALRVAMQTREQHI----RRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKLGTV 355 (946)
Q Consensus 281 d~~g~~~~~l~l~tre~~i----rre~aTsni~t~~~l~a~~aa~y~~~~g~~G-l~~i~~~~~~~a~~l~~~L~~~g~~ 355 (946)
..+.+.+....... .....|.|. ....++.+++ ..+...| ++++.++..++++++++.|+++| +
T Consensus 219 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~-~ 287 (366)
T 1m32_A 219 -----RSLSLDLYAQWRCMEDNHGKWRFTSPT---HTVLAFAQAL--KELAKEGGVAARHQRYQQNQRSLVAGMRALG-F 287 (366)
T ss_dssp -----SCSTTCHHHHHHHHHHTTTCCSSCCCH---HHHHHHHHHH--HHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred -----CCccccHHHHHhhhcccCCCCCCCCCH---HHHHHHHHHH--HHHHHccCHhHHHHHHHHHHHHHHHHHHHCC-C
Confidence 01111110000000 001133443 2333444443 3444455 88899999999999999999986 8
Q ss_pred EEcCC--CCcC-eEEEecC---C--HHHHHHHHHHcCCeeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 356 EVQGL--PFFD-TVKVKCA---D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 356 ~~~~~--~~~~-~~~i~~~---~--~~~v~~~L~~~GI~~~~~---~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++..+ +... .+.+.++ + ..++.+.|.++||.++.. .++.+|++++..++++|+++++++|..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 288 NTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp CBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred eeccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 77643 1222 4556554 3 788999999999988653 357899999999999999999999963
No 136
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.77 E-value=6.1e-18 Score=194.12 Aligned_cols=299 Identities=15% Similarity=0.127 Sum_probs=198.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|.+ ... +..++|+++...+ ++.+. .++++|+++...|..+...+...|.++
T Consensus 79 ~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~---~~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~ 150 (409)
T 2gb3_A 79 AGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFS---FAVIA-----NPGDEILVLEPFYANYNAFAKIAGVKL 150 (409)
T ss_dssp TCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHH---HHHHC-----CTTCEEEEEESCCTHHHHHHHHHTCEE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHH---HHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEE
Confidence 466666667777777666643 223 4455566555433 33321 246889999888887777888999999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-cc
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 665 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l~ 665 (946)
+.+|.++ +..+ +++|+++++ +++++|++++|+ .+|.+. .++++|+++|+++|+++++|+++.... .+ ..
T Consensus 151 ~~v~~~~~~~~~~-~~~l~~~l~---~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~ 226 (409)
T 2gb3_A 151 IPVTRRMEEGFAI-PQNLESFIN---ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFA 226 (409)
T ss_dssp EEEECCGGGTSCC-CTTGGGGCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred EEeccCCCCCCcc-HHHHHHhhC---cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCC
Confidence 9999875 2344 888888886 689999999995 589874 259999999999999999999874211 11 01
Q ss_pred C--CCccCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHH
Q 002263 666 S--PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 666 ~--pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
. ++..+.|+++.++||+|+. +|.++|++++++ ++.+.+.... ...+ +. +.....
T Consensus 227 ~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~l~~~l~~~~------------~~~~---~~----~~~~~~ 283 (409)
T 2gb3_A 227 SALSIESDKVVVIDSVSKKFSA----CGARVGCLITRNEELISHAMKLA------------QGRL---AP----PLLEQI 283 (409)
T ss_dssp CGGGSCCTTEEEEEESTTTTTC----GGGCCEEEECSCHHHHHHHHHHH------------HHSC---CC----CHHHHH
T ss_pred CccccCCCCEEEEecchhccCC----ccceEEEEEECcHHHHHHHHHHH------------hccC---CC----CHHHHH
Confidence 1 1113679999999999853 345689999988 7655432100 0011 11 122222
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC---
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY--- 818 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~--- 818 (946)
++.++|.. +.+++.+..++...+++++.+.|++. +.+.. .+.+..+ +.++++ +.+..++.++|.++
T Consensus 284 a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~--~~~~~~------~~~~~~l~~~l~~~~~~ 353 (409)
T 2gb3_A 284 GSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEHGLKRFT-KPSGAFY--ITAELP------VEDAEEFARWMLTDFNM 353 (409)
T ss_dssp HHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBC-CCSBSSE--EEEECS------SSCHHHHHHHHHHSCCB
T ss_pred HHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHcCceeee-CCCeeEE--EEEEeC------CCCHHHHHHHHHhcccc
Confidence 23333322 56667777777788899999999875 33311 2222221 334553 35788999999987
Q ss_pred ---CcccCC-CCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 819 ---GFHGPT-MSWP-----VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 819 ---Gi~~~~-~~~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
||.+.. ..|. ..+.+||+++ +++++++++++.|++++++++
T Consensus 354 ~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 354 DGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp TTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 998642 2221 1478999998 789999999999999987764
No 137
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.77 E-value=4.7e-18 Score=193.74 Aligned_cols=293 Identities=13% Similarity=0.104 Sum_probs=193.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|.+ ... +..++|+++.. ++++.+. .++++|+++...|..+...+...|+++
T Consensus 78 ~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~---~~~~~l~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~ 149 (389)
T 1o4s_A 78 RGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALF---NAFMALL-----DPGDEVIVFSPVWVSYIPQIILAGGTV 149 (389)
T ss_dssp TCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHH---HHHHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHH---HHHHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEE
Confidence 466666666667776666863 333 34445554543 3344331 246889999998888888889999999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-cc
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 665 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l~ 665 (946)
+.+|.++ ++.+|+++|+++++ +++++|++++|+ .+|.+. .++++|+++|+++|+++++|+++.... .+ ..
T Consensus 150 ~~v~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~ 226 (389)
T 1o4s_A 150 NVVETFMSKNFQPSLEEVEGLLV---GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFT 226 (389)
T ss_dssp EEEECCGGGTTCCCHHHHHHTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCC
T ss_pred EEEecCCccCCCCCHHHHHHhcc---cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 9999875 36789999999996 689999999995 689884 249999999999999999999875211 11 00
Q ss_pred CCCc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 666 SPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 666 ~pg~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
.... .+.|+++.++||+|+. .|.++|++++++++.+.+..... .. ..+++ ....
T Consensus 227 ~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~l~~~~~~~~~l~~~~~------------~~--~~~~~----~~~~ 284 (389)
T 1o4s_A 227 SILDVSEGFDRIVYINGFSKSHSM----TGWRVGYLISSEKVATAVSKIQS------------HT--TSCIN----TVAQ 284 (389)
T ss_dssp CHHHHCSSSTTEEEEEESTTTTTC----GGGCCEEEECCHHHHHHHHHHHH------------HH--TCSCC----HHHH
T ss_pred CHhhcCCCCCcEEEEeechhhcCC----cccceEEEEeCHHHHHHHHHHhh------------hc--ccCCC----HHHH
Confidence 1111 4679999999999853 24568999998776544321000 00 01111 1111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
.++.+ .+. +++.+..++...+++++.+.|++. +.+. .+.+..+ +.++++ .+..++.++|. ++|
T Consensus 285 ~a~~~---~l~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~--~~~~~~-------~~~~~l~~~l~~~~g 349 (389)
T 1o4s_A 285 YAALK---ALE-VDNSYMVQTFKERKNFVVERLKKMGVKFV--EPEGAFY--LFFKVR-------GDDVKFCERLLEEKK 349 (389)
T ss_dssp HHHHH---HTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCC--CCSBSSE--EEEECS-------SCHHHHHHHHHHHHC
T ss_pred HHHHH---HHh-ccHHHHHHHHHHHHHHHHHHHHhcCCeee--cCCcceE--EEEeCC-------CCHHHHHHHHHHHCC
Confidence 12222 232 235666677778889999999875 3332 2222221 334542 35788999997 889
Q ss_pred cccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 820 FHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 820 i~~~~-~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
|.+.. ..|..++.+|++++ .++++++++++.|.++++
T Consensus 350 i~v~~g~~f~~~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 350 VALVPGSAFLKPGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp EECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred EEEeCchhcCCCCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 98642 23333579999998 389999999999987753
No 138
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.77 E-value=9.4e-18 Score=193.66 Aligned_cols=303 Identities=13% Similarity=0.069 Sum_probs=197.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cc-c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~-~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|.+ .. . +..++|+++... +++.+. .++++|+++...|..+...+...|.+
T Consensus 77 ~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~---~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 148 (429)
T 1yiz_A 77 FGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA---TIQGHV-----DEGDEVIIIEPFFDCYEPMVKAAGGI 148 (429)
T ss_dssp SCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH---HHHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH---HHHHhc-----CCCCEEEEcCCCchhHHHHHHHcCCE
Confidence 466667777777777777843 33 3 344445545433 334321 24578999888888887888899999
Q ss_pred EEEEcCCCC----------CCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccc
Q 002263 592 IVSVGTDAK----------GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANM 658 (946)
Q Consensus 592 vv~v~~~~~----------g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~ 658 (946)
++.+|.+++ +.+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 225 (429)
T 1yiz_A 149 PRFIPLKPNKTGGTISSADWVLDNNELEALFN---EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYE 225 (429)
T ss_dssp EEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred EEEEeCCcccccccccccCcccCHHHHHHHhc---cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEecccc
Confidence 999998753 4699999999996 789999999994 6898862 59999999999999999999864
Q ss_pred cc-ccc--ccC----CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcc
Q 002263 659 NA-QVG--LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 731 (946)
Q Consensus 659 ~a-~~g--l~~----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~ 731 (946)
.. ..+ ... ++..+.|+++.++||+|+. +|.++|++++++++.+.+.... .....+
T Consensus 226 ~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~--------------~~~~~~ 287 (429)
T 1yiz_A 226 HMVFEPFEHIRICTLPGMWERTITIGSAGKTFSL----TGWKIGWAYGPEALLKNLQMVH--------------QNCVYT 287 (429)
T ss_dssp TCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTC----GGGCCEEEESCHHHHHHHHHHH--------------HTTTCC
T ss_pred ccccCCCCCcChhhccCCcCceEEEecchhccCC----CCcceEEEEeCHHHHHHHHHHH--------------hhcccC
Confidence 21 111 111 1235789999999999852 2455899999877655432100 000111
Q ss_pred cCccchhhHHHHHHHHHHHH----c--HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccc--
Q 002263 732 AAPWGSALILPISYTYIAMM----G--SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN-- 802 (946)
Q Consensus 732 ~~~~g~~~~~~~a~a~l~~l----G--~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~-- 802 (946)
. +.....++.++|... + .+.+.+..++...+++++.+.|++. +.+. .+.+..+ +.++++....
T Consensus 288 ~----~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~g~~--~~~~~~~~~~~~ 359 (429)
T 1yiz_A 288 C----ATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPT--VPQGGYF--MVADWSSLDSKV 359 (429)
T ss_dssp C----CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEE--ECSBSSE--EEEECCSSCTTT
T ss_pred C----ChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCcceE--EEEEcccccccc
Confidence 1 122222334445441 3 4456677777778889999999875 3332 2222222 4556542100
Q ss_pred -----cCCCCHHHHHHHHH-HCCcccCCC-CCC-------CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 803 -----TAGIEPEDVAKRLM-DYGFHGPTM-SWP-------VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 803 -----~~g~~~~~i~~~L~-~~Gi~~~~~-~~p-------~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
....+..++.++|. ++|+.+... .|. ..+++||++. .++++|+++++.|++++
T Consensus 360 ~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENLQKAAEILRKWK 426 (429)
T ss_dssp TCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHS
T ss_pred cccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHHHHHHHHHHHHhc
Confidence 00135678999887 789986432 232 1578999997 48999999999998764
No 139
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.77 E-value=7.3e-18 Score=190.52 Aligned_cols=290 Identities=12% Similarity=0.080 Sum_probs=190.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|.+ ... +..++|+++...+ ++.+. .++++|+++...|..+...+...|.++
T Consensus 66 ~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~---~~~~~-----~~gd~vl~~~p~~~~~~~~~~~~g~~~ 137 (370)
T 2z61_A 66 RGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFA---LSSII-----DDGDEVLIQNPCYPCYKNFIRFLGAKP 137 (370)
T ss_dssp TCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHH---HHHHC-----CTTCEEEEESSCCTHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHH---HHHhc-----CCCCEEEEeCCCchhHHHHHHHcCCEE
Confidence 455566666666666655643 233 4455666555433 33321 245889999998888777888999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEeccccccc-cc-ccCCC-
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LTSPG- 668 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l~~pg- 668 (946)
+.+| +|+++|+++++ +++++|++++|+ .+|.+. +++ |.++|+++|+++++|+++.... .+ .....
T Consensus 138 ~~v~------~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 206 (370)
T 2z61_A 138 VFCD------FTVESLEEALS---DKTKAIIINSPSNPLGEVI-DRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE 206 (370)
T ss_dssp EEEC------SSHHHHHHHCC---SSEEEEEEESSCTTTCCCC-CHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGG
T ss_pred EEeC------CCHHHHHHhcc---cCceEEEEcCCCCCcCccc-CHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHH
Confidence 9998 68999999996 689999999995 689988 688 9999999999999999875221 11 01111
Q ss_pred ---ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 669 ---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 669 ---~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
..+.|+++.++||+|+. .|.++|++++++++.+.+...... .+ .+. +.....++.
T Consensus 207 ~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~------------~~--~~~----~~~~~~a~~ 264 (370)
T 2z61_A 207 FDENLEKTILINGFSKLYAM----TGWRIGYVISNDEIIEAILKLQQN------------LF--ISA----PTISQYAAL 264 (370)
T ss_dssp TCTTCSSEEEEEESTTTTTC----GGGCCEEEECCHHHHHHHHHHHHH------------HT--SSS----CHHHHHHHG
T ss_pred ccCCCCcEEEEecChhccCC----ccceEEEEEECHHHHHHHHHHHhh------------cc--cCC----CHHHHHHHH
Confidence 23678999999999853 245689999988765543210000 00 011 111222223
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcccCC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPT 824 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~~ 824 (946)
++|..++.+.+.+..++...+.+++.+.|++. .+.+..+.+..+ +.++++ + +..++.++|. ++||.+..
T Consensus 265 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~~~~------~-~~~~~~~~l~~~~gi~v~~ 334 (370)
T 2z61_A 265 KAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGAYY--VFPNIG------E-DGREFAYKLLKEKFVALTP 334 (370)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCBTTE--ECCBCS------S-CHHHHHHHHHHHHCEECEE
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCcceE--EEEecC------C-CHHHHHHHHHHhCCEEEeC
Confidence 33333245566777777778889999999875 222212222221 223443 2 6788999997 78998643
Q ss_pred C-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 825 M-SWP--VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 825 ~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
. .|. ..+.+||+++ +++++++++++.|.++++
T Consensus 335 g~~f~~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 335 GIGFGSKGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp GGGGCGGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred chhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 2 232 2578999998 689999999999987753
No 140
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.77 E-value=1.1e-16 Score=187.19 Aligned_cols=304 Identities=16% Similarity=0.193 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC-------
Q 002263 520 EMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~------- 590 (946)
+...++.+.++++++.+. ..++.++|++++++++.+++.|...+|..++++||+ ..+.||....+....|.
T Consensus 99 ~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~ 178 (472)
T 3hmu_A 99 VPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQS 178 (472)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhcccc
Confidence 445678899999987543 246778999999989888888877777656777775 57789988776555442
Q ss_pred ----EEEEEcCCC-----CCCCC--------HHHHHHHHHhcC-CCeEEEEEeCCC-ccccccc---CHHHHHHHHHHcC
Q 002263 591 ----KIVSVGTDA-----KGNIN--------IEELRKAAEANR-DNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNG 648 (946)
Q Consensus 591 ----~vv~v~~~~-----~g~~D--------~e~L~~~i~~~~-~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~~g 648 (946)
.++.++... ++ .| +++|++++++.. +++++|+++.++ ..|++.+ .+++|+++|++||
T Consensus 179 ~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~g 257 (472)
T 3hmu_A 179 GLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYD 257 (472)
T ss_dssp CCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTT
T ss_pred CCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 355565422 12 34 889999997543 467777776653 5677651 2999999999999
Q ss_pred CEEEEecccccccccccCCCcc--------CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCC
Q 002263 649 GQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 720 (946)
Q Consensus 649 ~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~ 720 (946)
++|++|.++ .|+.+.|.+ .+|+++++ |+++ +||.++|++++++++++.+....+.
T Consensus 258 illI~DEv~----~gfgr~G~~~a~~~~~v~pdi~t~s--K~l~----gg~~plG~v~~~~~i~~~~~~~~~~------- 320 (472)
T 3hmu_A 258 ILLIADEVI----CGFGRTGNWFGTQTMGIRPHIMTIA--KGLS----SGYAPIGGSIVCDEVAHVIGKDEFN------- 320 (472)
T ss_dssp CEEEEECTT----TTTTTTSSSCHHHHHTCCCSEEEEC--GGGT----TTSSCCEEEEEEHHHHHHHTTSCBC-------
T ss_pred CEEEEEccc----cCCcccCccchhHHhCCCCceeeec--hhhh----cCCcceEEEEECHHHHHhcccCCcc-------
Confidence 999999874 445444432 36888764 8863 5568899999998877655211100
Q ss_pred CCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH-HHHHHHHHHHhcc--CCee--eccCCCceeeeEEE
Q 002263 721 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI-LNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIV 795 (946)
Q Consensus 721 ~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~-~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~ 795 (946)
..+..+ ++...++++.+.|..+..+.+. ++.. ++.++++++|+++ +... ..+ .+.+ +.+
T Consensus 321 -----~~~t~~----~np~a~aAa~aaL~~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~v~~vr~-~G~~---~~i 384 (472)
T 3hmu_A 321 -----HGYTYS----GHPVAAAVALENLRILEEENIL---DHVRNVAAPYLKEKWEALTDHPLVGEAKI-VGMM---ASI 384 (472)
T ss_dssp -----CCCTTT----TCHHHHHHHHHHHHHHHHTTHH---HHHHHTHHHHHHHHHHGGGGSTTEEEEEE-ETTE---EEE
T ss_pred -----ccCCCC----CCHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHhcCCCeEEEEe-cCce---EEE
Confidence 001112 3445555666777766555443 3344 5677888888654 2211 111 1222 233
Q ss_pred eccccccc-C------CCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 796 DLRGLKNT-A------GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 796 ~~~~~~~~-~------g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
++...... . .....++.++|.++|+.+... ++.+||+|+...|++|+|+++++|+++++++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 385 ALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV----GDRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp EECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCccccccccchhHHHHHHHHHHHHHCCcEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33210000 0 001568999999999987533 38999999999999999999999999987764
No 141
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.77 E-value=7.9e-18 Score=192.08 Aligned_cols=301 Identities=15% Similarity=0.195 Sum_probs=194.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~-~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|.+ ... +.+++|+++... +++.+. .++ ++|+++...|..+...+...|.+
T Consensus 76 ~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~---~~~~l~-----~~g~d~vl~~~p~~~~~~~~~~~~g~~ 147 (398)
T 3ele_A 76 QGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI---CFRALT-----SDAYDEFITIAPYFPEYKVFVNAAGAR 147 (398)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH---HHHHHC-----CSTTCEEEEESSCCTHHHHHHHHTTCE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH---HHHHHc-----CCCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 566777778888888888853 333 444555555533 333331 245 89999998887777788899999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHH------cCCEEEEecccccc-
Q 002263 592 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHD------NGGQVYMDGANMNA- 660 (946)
Q Consensus 592 vv~v~~~~~-g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~------~g~ll~vD~a~~~a- 660 (946)
++.+|.+++ +.+|+++|+++++ +++++|++++| |.+|.+.+ ++++|+++|++ +|+++++|+++...
T Consensus 148 ~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~ 224 (398)
T 3ele_A 148 LVEVPADTEHFQIDFDALEERIN---AHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIV 224 (398)
T ss_dssp EEEECCCTTTSSCCHHHHHHTCC---TTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCB
T ss_pred EEEEecCCcCCcCCHHHHHHHhC---cCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccc
Confidence 999999764 5899999999996 68999999999 46898862 38888899999 99999999986421
Q ss_pred cccccCC---CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 661 QVGLTSP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 661 ~~gl~~p---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
..+-..| ...+.++++.++||+|+. .|.++|++++++++..... ....... .....+..+. +
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~----~ 289 (398)
T 3ele_A 225 YDGIKVPFVTKYYDNTLVCYSYSKSLSL----PGERIGYVLVPDEVYDKAE--LYAAVCG-----AGRALGYVCA----P 289 (398)
T ss_dssp CTTCCCCCGGGTCSSEEEEEESTTTSSC----TTTCCEEEECCTTSTTHHH--HHHHHHH-----HHHHTTCCCS----C
T ss_pred cCCCCcCChHhhcCCeEEEEehhhcCCC----ccceeEEEEEcchhhhHHH--HHHHHHH-----HhhhccccCC----C
Confidence 1121111 223556888899999853 4678999999877554210 0000000 0000011111 1
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
.....++..+ +.... ..++...+++++.+.|++. +.+. .+.+.++ +.++++ +.+..++.+.|.
T Consensus 290 ~~~~~a~~~~---l~~~~---~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~--~~~~~~------~~~~~~~~~~l~ 353 (398)
T 3ele_A 290 SLFQKMIVKC---QGATG---DINAYKENRDLLYEGLTRIGYHCF--KPDGAFY--MFVKAL------EDDSNAFCEKAK 353 (398)
T ss_dssp HHHHHHHTTC---TTCCC---CHHHHHHHHHHHHHHHHHHTCCEE--CCSBSSE--EEEECS------SSCHHHHHHHHH
T ss_pred HHHHHHHHHH---hcCHH---HHHHHHHHHHHHHHHHHHcCCeec--CCCeeEE--EEEEcC------CCCHHHHHHHHH
Confidence 1111111111 22111 2234456778888888875 4442 2222221 345554 246889999999
Q ss_pred HCCcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 817 ~~Gi~~~~-~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++||.+.. ..|..++++||++. .++++|+++++.|.++++++
T Consensus 354 ~~gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 354 EEDVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp TTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred HCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 99998643 22333689999996 68999999999999988765
No 142
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.77 E-value=1e-16 Score=184.80 Aligned_cols=290 Identities=15% Similarity=0.179 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCCHHHHHHcCCE-------
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCGMK------- 591 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~~~~~a~~~G~~------- 591 (946)
+...++++++++++|.+.+ +..++|++++++++.+++.|...+|..++++||++ .+.|+....++...|.+
T Consensus 99 ~~~~~l~~~la~~~g~~~v-~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~ 177 (420)
T 2pb2_A 99 EPALRLGRKLIDATFAERV-LFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFG 177 (420)
T ss_dssp HHHHHHHHHHHHHSSCSEE-EEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSS
T ss_pred HHHHHHHHHHHhhCCCCeE-EEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCC
Confidence 3456888999999987654 56678888888777777766555554344577765 56788887777666654
Q ss_pred -----EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccc---ccCHHHHHHHHHHcCCEEEEecccccccc
Q 002263 592 -----IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVY---EEGIDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 592 -----vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~---~~~i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
++.+|. .|+++|+++++ +++++|+++.++ +.|++ ..++++|+++|+++|+++++|+++.
T Consensus 178 p~~~~~~~~~~-----~d~~~le~~i~---~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~---- 245 (420)
T 2pb2_A 178 PKPADIIHVPF-----NDLHAVKAVMD---DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC---- 245 (420)
T ss_dssp SCCSCEEEECT-----TCHHHHHHHCC---TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT----
T ss_pred CCCCCeEEecC-----CCHHHHHHHhc---cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc----
Confidence 666665 38999999996 689999987764 55652 1369999999999999999999863
Q ss_pred cccCCC--------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 663 GLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 663 gl~~pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
++.+.| ...+|++++ +|+|+ +|.++|++++++++.+.+.... ...+.+
T Consensus 246 g~~~~g~~~~~~~~~~~~diit~--sK~l~-----~G~~iG~~~~~~~l~~~l~~~~--------------~~~t~~--- 301 (420)
T 2pb2_A 246 GMGRTGDLFAYMHYGVTPDILTS--AKALG-----GGFPVSAMLTTQEIASAFHVGS--------------HGSTYG--- 301 (420)
T ss_dssp TTTTTSSSSHHHHHTCCCSEEEE--CGGGG-----TTSCCEEEEECHHHHTTCC------------------CCEEC---
T ss_pred CcccCCcHHHHHhcCCCCCeEEe--ccccc-----CCCceEEEEEhHHHHHhhcCCC--------------cCcccC---
Confidence 232222 124798865 69884 4567899999887766543110 001112
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPE 809 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~ 809 (946)
++...++++.+.|..+..+. ..++...+++++.++|++. +... ..+ .+.+ +.+++.. ..+.+..
T Consensus 302 -~~~~~~aa~~a~L~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~v~~~~---~~~~~~~ 370 (420)
T 2pb2_A 302 -GNPLACAVAGAAFDIINTPE---VLQGIHTKRQQFVQHLQAIDEQFDIFSDIRG-MGLL---IGAELKP---KYKGRAR 370 (420)
T ss_dssp -CCHHHHHHHHHHHHHHSSHH---HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE-ETTE---EEEEECG---GGTTCHH
T ss_pred -cCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-cceE---EEEEECC---CchHHHH
Confidence 23444455666677665543 3445557788888888763 2321 122 1222 3445431 0112578
Q ss_pred HHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 810 DVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 810 ~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++.++|.++|+.+.... ++.+|++|+...|++|+|++++.|+++++++
T Consensus 371 ~l~~~l~~~Gi~v~~~~---~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 371 DFLYAGAEAGVMVLNAG---ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp HHHHHHHHTTEECEESS---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEeCC---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999875332 4789999998899999999999999987764
No 143
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.77 E-value=1e-16 Score=180.61 Aligned_cols=298 Identities=13% Similarity=0.119 Sum_probs=208.3
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 138 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~ 138 (946)
++.+..+...|+.+.+.+.+....+..|.+. ++ .++++.+|+++|.++.++.+++|+|.++++++.++.
T Consensus 35 l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----~~-----~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~- 103 (365)
T 3get_A 35 LASNENPFGTPPKAIECLRQNANKAHLYPDD-----SM-----IELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL- 103 (365)
T ss_dssp CSSCCCTTCSCHHHHHHHHHHGGGTTSCCCT-----TC-----HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC-
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----Ch-----HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHh-
Confidence 3445555557777766666533323333221 11 267889999999988899999999988888776652
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecchHHHHH
Q 002263 139 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIK 208 (946)
Q Consensus 139 ~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~ 208 (946)
. +||+|+++...|+++...++. .|.+++.+++ +++++ +++++++|++++| |.+|.+.|++++.+
T Consensus 104 ~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~ 177 (365)
T 3get_A 104 N--SKNAFLQAGVTFAMYEIYAKQ----CGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATE 177 (365)
T ss_dssp C--TTCEEEECSSCCTHHHHHHHH----HTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred C--CCCEEEEeCCChHHHHHHHHH----cCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHH
Confidence 3 789999999999998887653 4888888875 45566 7789999999998 56999999999998
Q ss_pred HHH--hCCcEEEEEecCcc------ccCC-CCC----CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCc
Q 002263 209 NAH--ANGVKVVMATDLLA------LTIL-KPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 274 (946)
Q Consensus 209 ~a~--~~gal~~v~a~~~a------l~~l-~~~----~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~ 274 (946)
+++ ++|+++++|. ..+ .+.. .+. ...+.+++++|. |.|+. .|..+|++.+++++.+.+...
T Consensus 178 l~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~ 252 (365)
T 3get_A 178 FIKGVNEDCLVVIDA-AYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGL----GGLRIGYGIANANIISAFYKL 252 (365)
T ss_dssp HHHTSCTTSEEEEEC-TTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSC----TTTCCEEEEECHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEeC-ccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcC----cchheEEEEcCHHHHHHHHHh
Confidence 888 6799999953 322 1111 111 234678889887 87753 244579999988877655110
Q ss_pred eEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 002263 275 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 354 (946)
Q Consensus 275 ~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~ 354 (946)
+...+.|. ....+..+ .+...+.++++.++..++.+++.+.|+++|
T Consensus 253 --------------------------~~~~~~~~---~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g- 298 (365)
T 3get_A 253 --------------------------RAPFNVSN---LALKAAVA----AMDDDEFTEKTLENNFSQMELYKEFAKKHN- 298 (365)
T ss_dssp --------------------------SCTTCSCH---HHHHHHHH----HHTCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred --------------------------cCCCCcCH---HHHHHHHH----HhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 00001111 11212222 222346788999999999999999999997
Q ss_pred EEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeeec---CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 355 VEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 355 ~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~---~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+++.... ..-+.+.+++ ..++.+.|.++||.++... ++.+|+|++ +++|+++++++|.
T Consensus 299 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~ 361 (365)
T 3get_A 299 IKIIDSY-TNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFD 361 (365)
T ss_dssp CEECCCS-SSEEEEECSSSCHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHHHH
T ss_pred CEECCCC-CeEEEEECCCCCHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHH
Confidence 8876432 1225566653 7899999999999987643 589999987 8999999999986
No 144
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.77 E-value=2.7e-17 Score=187.35 Aligned_cols=277 Identities=13% Similarity=0.113 Sum_probs=193.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
.|..+...++++.+++++|.+. ..++.+||.+++.++.++. ++||+|+++...|+++...++ ..|.+++.+
T Consensus 84 ~g~~~~~~~l~~~la~~~~~~~--~i~~~sGt~a~~~~l~~~~---~~gd~v~~~~~~~~~~~~~~~----~~g~~~~~~ 154 (399)
T 3tqx_A 84 CGTQTIHKELEKDISEFLGTDD--TILYSSCFDANGGLFETLL---GPEDAIISDELNHASIIDGIR----LCKAQRYRY 154 (399)
T ss_dssp CCCBHHHHHHHHHHHHHHTCSE--EEEESCHHHHHHTTHHHHC---CTTCEEEEETTCCHHHHHHHH----SCCSEEEEE
T ss_pred ccCchHHHHHHHHHHHHHCCCc--EEEECchHHHHHHHHHHhc---CCCCEEEECCcccHHHHHHHH----HcCCceeEe
Confidence 3444566788899999999873 5566777876665555442 388999999999999888753 468888887
Q ss_pred cc---ccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC---------C
Q 002263 175 DL---KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG---------E 234 (946)
Q Consensus 175 ~~---~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~---------~ 234 (946)
+. +++++ +.+ ++++|++.+| |.+|.+.|+++|.++|+++|+++++| +..+.+.....+ .
T Consensus 155 ~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~ 233 (399)
T 3tqx_A 155 KNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVD-DSHAVGFIGENGRGTPEYCGVA 233 (399)
T ss_dssp CTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEE-CTTTTTTSSTTSCCHHHHHTCT
T ss_pred CCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCccccccCCCCCchHHhhCCC
Confidence 64 45554 432 7899999988 78999999999999999999999994 334444332211 1
Q ss_pred ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH
Q 002263 235 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 313 (946)
Q Consensus 235 ~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~ 313 (946)
.+.|++++|. |+|++ .|+ |++++++++++.+... ...+ ...++.|. ..
T Consensus 234 ~~~di~~~s~sK~~~g-----~~g-G~~~~~~~~~~~~~~~----------~~~~------------~~~~~~~~---~~ 282 (399)
T 3tqx_A 234 DRVDILTGTLGKALGG-----ASG-GYTSGHKEIIEWLRNR----------SRPY------------LFSNTVAP---VI 282 (399)
T ss_dssp TCCSEEEEESSSSSCS-----SCC-EEEEECHHHHHHHHHH----------CHHH------------HSSCCCCH---HH
T ss_pred CCCcEEEecchHhccc-----Cce-EEEEcCHHHHHHHHHh----------Ccce------------eccCCCcH---HH
Confidence 2669999998 87752 233 8999998877665210 0000 00112221 22
Q ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee
Q 002263 314 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 314 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~ 390 (946)
..+..+++ .+.. ++++++.++..++.+++++.|+++| +++... ...-+.+.++. +.++.++|.++||.+...
T Consensus 283 ~~~~~~~l--~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 357 (399)
T 3tqx_A 283 VATSLKVL--ELLK-TEGPQLRKQLQENSRYFRAGMEKLG-FQLVPG-NHPIIPVMLGDAQLATNMADHLLQEGIYVVGF 357 (399)
T ss_dssp HHHHHHHH--HHHH-HTHHHHHHHHHHHHHHHHHHHHHHT-CCBCCC-SSSEEEEEEECHHHHHHHHHHHHHTTEECCEE
T ss_pred HHHHHHHH--HHHh-hccHHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCCEEeee
Confidence 22333333 2222 5678899999999999999999987 777632 22234444443 678999999999988643
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+|++++..+|++|+++++++|..
T Consensus 358 ~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 391 (399)
T 3tqx_A 358 SYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQ 391 (399)
T ss_dssp CTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHH
Confidence 125899999999999999999999973
No 145
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.77 E-value=3.1e-18 Score=193.94 Aligned_cols=297 Identities=14% Similarity=0.092 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC-C
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~-~ 599 (946)
...++++.+++++|.+.. +.+++|+++...++.++ +.+++++|+++...|.++...+...|++++.++++ +
T Consensus 37 ~~~~l~~~la~~~~~~~~-i~~~sgt~al~~~l~~l-------~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 108 (373)
T 3frk_A 37 EDKKFEQEFADYCNVNYC-IGCGNGLDALHLILKGY-------DIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIR 108 (373)
T ss_dssp HHHHHHHHHHHHHTSSEE-EEESCHHHHHHHHHHHT-------TCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECEETT
T ss_pred hHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHc-------CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecccc
Confidence 356888999999998843 55677776654443332 12356899999999988888888999999999997 4
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC--CCEEEe
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG--ADVCHL 677 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G--aDi~~~ 677 (946)
++.+|+++|+++++ +++++|++++ .+|... |+++|.++|+++|+++++|+++..+.. .....+| .|++++
T Consensus 109 ~~~~d~~~l~~~l~---~~~~~v~~~n--~~G~~~-~l~~i~~l~~~~~~~li~D~a~~~g~~--~~~~~~~~~~d~~~~ 180 (373)
T 3frk_A 109 TYNIDPSLIESAIT---EKTKAIIAVH--LYGQPA-DMDEIKRIAKKYNLKLIEDAAQAHGSL--YKGMKVGSLGDAAGF 180 (373)
T ss_dssp TTEECGGGTGGGCC---TTEEEEEEEC--CTTCCC-CHHHHHHHHHHHTCEEEEECTTCTTCE--ETTEETTSSSSEEEE
T ss_pred ccCcCHHHHHHhcC---CCCeEEEEEC--CCcCcc-cHHHHHHHHHHcCCEEEEECCcccCCE--ECCEeccccccEEEE
Confidence 58899999999996 6899998765 468887 799999999999999999998753221 1222344 799998
Q ss_pred CC--CcccccCCCCCCCcceeEEEec-ccCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 678 NL--HKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 678 s~--hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
++ ||+++.+ +.+|++++++ .+.+.+.. ...+....+ ........ ...... .++.. ....
T Consensus 181 S~~~~K~l~~~-----g~gg~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~g~~--~~~~~~--~aa~~---~~~~ 243 (373)
T 3frk_A 181 SFYPAKNLGSL-----GDGGAVVTNDKDLAEKIKALSNYGSEKKY-----HHIYKGFN--SRLDEL--QAGFL---RVKL 243 (373)
T ss_dssp ECCTTSSSCCS-----SSCEEEEESCHHHHHHHHHHHBTTCSBTT-----BCCSCCCB--CCCCHH--HHHHH---HHHH
T ss_pred eCcCCCccCcc-----ceeEEEEeCCHHHHHHHHHHHhcCcccCC-----cccccccc--CCCCHH--HHHHH---HHHH
Confidence 85 4887310 1256777764 33322210 000000000 00000000 000121 11222 2223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCeeeccC-C--CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKHYPILFRGV-N--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPV 829 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~-~--~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~ 829 (946)
+++.+..++...+++++.+.|++.. +..... . ...++.+.+.. .+..++.++|.++||.++... .|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~ 314 (373)
T 3frk_A 244 KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS--------EKRDELQKYLNNNGIGTLIHYPIPI 314 (373)
T ss_dssp HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE--------SSHHHHHHHHHHTTBCCBCSCSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe--------CCHHHHHHHHHHCCCCcccCcCCcc
Confidence 4566666777788889999987752 222111 1 11223333332 257899999999999875332 111
Q ss_pred -----------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 830 -----------------------PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 830 -----------------------~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+.+|+++...+|++|||+++++|++...+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 315 HLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp GGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred ccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 167999999999999999999999876543
No 146
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.77 E-value=2.5e-17 Score=187.52 Aligned_cols=345 Identities=12% Similarity=0.106 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHcCccCcCCccccceeeecCCCcccccccc----cCccccccCCCCcccccccHHHHHHHHHHHHHHhhC
Q 002263 459 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPV----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 534 (946)
Q Consensus 459 ~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~~~~~~~~~~~----~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G 534 (946)
.++.+..+++...+. .++.|+++.+.++...+...+ .......|.+ .+|..++...+.+++.+.+|
T Consensus 17 ~~~~~~~~~~~~~g~----~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g 86 (391)
T 3h14_A 17 MDVMEAARRAEEAGR----RIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTV------ALGLPALRQRIARLYGEWYG 86 (391)
T ss_dssp HHHHHHHHHHHHTTC----CCEECCCSSCSSCSCHHHHHHHHHHHC----------------CCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCC----CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCC------CCChHHHHHHHHHHHHHHhC
Confidence 455666666655442 356666665554432211110 0011112222 34566666677777777777
Q ss_pred CC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC--CCCHHHHH
Q 002263 535 FD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG--NINIEELR 609 (946)
Q Consensus 535 ~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g--~~D~e~L~ 609 (946)
.+ ... +.+++|+++...+ ++.+. .++++|+++...|..+...+...|++++.+++++++ .+|+++|+
T Consensus 87 ~~~~~~~v~~t~g~~~al~~~---~~~l~-----~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 158 (391)
T 3h14_A 87 VDLDPGRVVITPGSSGGFLLA---FTALF-----DSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFA 158 (391)
T ss_dssp CCCCGGGEEEESSHHHHHHHH---HHHHC-----CTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHT
T ss_pred CCCCHHHEEEecChHHHHHHH---HHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHH
Confidence 43 333 4455565555433 33321 246889998887777777788999999999998653 67999887
Q ss_pred HHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccc-ccccc-cCCCcc-CCCEEEeCCCccc
Q 002263 610 KAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVGL-TSPGYI-GADVCHLNLHKTF 683 (946)
Q Consensus 610 ~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl-~~pg~~-GaDi~~~s~hK~f 683 (946)
++ ++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.. ...+. .....+ +.++++.+++|+|
T Consensus 159 ~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 232 (391)
T 3h14_A 159 GL------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYF 232 (391)
T ss_dssp TS------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTT
T ss_pred hc------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhcc
Confidence 55 67788999994 6898862 499999999999999999998642 11111 111122 4567788899998
Q ss_pred ccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHH
Q 002263 684 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 763 (946)
Q Consensus 684 ~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~ 763 (946)
+. +|.++|++.+++++.+.+.... ... ..+. +.....++.+.+. +.+.+.+..++.
T Consensus 233 g~----~G~r~G~~~~~~~~~~~~~~~~------------~~~--~~~~----~~~~~~a~~~~l~--~~~~~~~~~~~~ 288 (391)
T 3h14_A 233 SM----TGWRVGWMVVPEDQVRVVERIA------------QNM--FICA----PHASQVAALAALD--CDAELQANLDVY 288 (391)
T ss_dssp CC----TTSCCEEEECCGGGHHHHHHHH------------HHT--TCCC----CHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred CC----ccceeEEEEeCHHHHHHHHHHH------------hhh--ccCC----CHHHHHHHHHHhC--ChHHHHHHHHHH
Confidence 53 4678999998877665432100 000 1111 1112222223333 556677777778
Q ss_pred HHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-CcccCC-CCCC---CCCEEEEEc
Q 002263 764 ILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHGPT-MSWP---VPGTLMIEP 837 (946)
Q Consensus 764 ~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi~~~~-~~~p---~~~~lri~~ 837 (946)
..+.+++.+.|++. +.....+ .+..+ ++++++. .+.+..++.++|.++ ||.+.. ..|. ..+.+||++
T Consensus 289 ~~~~~~l~~~l~~~~~~~~~~~-~~~~~--~~~~~~~----~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~ 361 (391)
T 3h14_A 289 KANRKLMLERLPKAGFTRIAPP-DGAFY--VYADVSD----LTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSY 361 (391)
T ss_dssp HHHHHHHHHHHHHHTCCCBCCC-CBTTE--EEEECTT----TCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcccCC-CeeEE--EEEecCc----cCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEe
Confidence 88899999999875 3322222 22221 3455542 145788999998875 998642 2222 247899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 002263 838 TESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 838 t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.. ++++++++++.|++++++.
T Consensus 362 ~~--~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 362 AR--ATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp CS--CHHHHHHHHHHHHHHHHHC
T ss_pred cC--CHHHHHHHHHHHHHHHHHh
Confidence 86 7899999999999887653
No 147
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.76 E-value=1e-17 Score=193.08 Aligned_cols=299 Identities=14% Similarity=0.153 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHHhhCC--Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 519 QEMFNNLGEWLCTITGF--DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~--~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
.++..++.+++++.+|. +... +..++|+++..+++ +.+. .++++|+++...|..+...+...|.+++.+
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~---~~~~-----~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~ 170 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIAL---QAFS-----EKGDAVLINSPVYYPFARTIRLNDHRLVEN 170 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHH---HHHS-----CTEEEEEEEESCCHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHH---HHhc-----CCCCEEEECCCCcHHHHHHHHHCCCEEEec
Confidence 45677888999999884 3333 44555665554443 3321 245789998887766666788899999999
Q ss_pred cCC-CCC--CCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccc---ccCHHHHHHHHHHcCCEEEEeccccc-ccccc--c
Q 002263 596 GTD-AKG--NINIEELRKAAEANRDNLSTLMVTYP-STHGVY---EEGIDEICKIIHDNGGQVYMDGANMN-AQVGL--T 665 (946)
Q Consensus 596 ~~~-~~g--~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~---~~~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl--~ 665 (946)
|++ .++ .+|+++|++++++ +++++|++++| |.+|.+ + ++++|+++|+++|+++++|+++.. ...+- .
T Consensus 171 ~~~~~~~~~~~d~~~le~~i~~--~~~~~vil~~p~nptG~~~~~~-~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~ 247 (421)
T 3l8a_A 171 SLQIINGRFEIDFEQLEKDIID--NNVKIYLLCSPHNPGGRVWDND-DLIKIAELCKKHGVILVSDEIHQDLALFGNTHH 247 (421)
T ss_dssp ECEEETTEEECCHHHHHHHHHH--TTEEEEEEESSBTTTTBCCCHH-HHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCC
T ss_pred cccccCCCeeeCHHHHHHHhhc--cCCeEEEECCCCCCCCCcCCHH-HHHHHHHHHHHcCCEEEEEccccccccCCCCCc
Confidence 986 343 6899999999973 68999999999 568988 4 699999999999999999998631 11110 0
Q ss_pred CCCc-----cCCCEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 666 SPGY-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 666 ~pg~-----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
.... .+.++++.+++|+|+. +|.++|++.++ +++.+.+...... ..+. +. +..
T Consensus 248 ~~~~~~~~~~~~~i~~~s~sK~~g~----~G~~~G~~~~~~~~l~~~~~~~~~~-----------~~~~--~~----n~~ 306 (421)
T 3l8a_A 248 SLNTLDASYKDFTIILSSATKTFNI----AGTKNSFAIIQNESLRRKFQYRQLA-----------NNQH--EV----PTV 306 (421)
T ss_dssp CGGGSCTTGGGTEEEEECSHHHHTC----GGGCCEEEECCSHHHHHHHHHHHHH-----------TTCS--CC----CHH
T ss_pred cHHHcCchhcCcEEEEEeChhhccC----chhheEeEEcCCHHHHHHHHHHHHh-----------cccC--CC----CHH
Confidence 1111 2344788899999953 45678999888 6665443210000 0000 11 222
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-C
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-Y 818 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~ 818 (946)
.++++.+.+. .+.+.+.+..++...+.+++.+.|++...+....+.+... .+++++. .+.+..++.++|.+ +
T Consensus 307 ~~~a~~aal~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~--~~v~~~~----~~~~~~~l~~~l~~~~ 379 (421)
T 3l8a_A 307 GMIATQAAFQ-YGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYL--VWLDFSA----YAIAQPQLSEKLQNEA 379 (421)
T ss_dssp HHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSE--EEEECGG----GTCCTTHHHHHHHHTT
T ss_pred HHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEE--EEEeccc----cCCCHHHHHHHHHHhC
Confidence 2233334443 3556677777777888999999998752222212223221 3366652 14567789999975 5
Q ss_pred CcccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 819 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 819 Gi~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
|+.+.. ..|. ..+.+||++. .++++|+++++.|+++++
T Consensus 380 gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 380 KVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp CEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred CEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 998643 2221 2589999998 589999999999988754
No 148
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.76 E-value=1e-17 Score=190.39 Aligned_cols=298 Identities=10% Similarity=0.077 Sum_probs=196.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cc-c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~-~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|.+ .. . +.+++|+++...+ ++.+. .++++|+++...|+.+...++..|.+
T Consensus 67 ~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~---~~~~~-----~~gd~vl~~~p~~~~~~~~~~~~g~~ 138 (386)
T 1u08_A 67 TGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAA---ITALV-----RNGDEVICFDPSYDSYAPAIALSGGI 138 (386)
T ss_dssp TCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHH---HHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHH---HHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCE
Confidence 466677777777777777854 33 3 4445555555333 33331 24688999988888888888999999
Q ss_pred EEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccccc-cccc--
Q 002263 592 IVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGL-- 664 (946)
Q Consensus 592 vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl-- 664 (946)
++.++.++ ++.+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++... ..+-
T Consensus 139 ~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 215 (386)
T 1u08_A 139 VKRMALQPPHFRVDWQEFAALLS---ERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGH 215 (386)
T ss_dssp EEEEECCTTTCCCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCC
T ss_pred EEEeecCcccCcCCHHHHHHhhc---ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCC
Confidence 99999876 47899999999996 789999999994 6898752 4899999999999999999987421 1111
Q ss_pred cCC----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 665 TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 665 ~~p----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
.+. +..+.|+++.++||+|+. .|.++|++++++++.+.+..... ....+. +...
T Consensus 216 ~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~~--------------~~~~~~----~~~~ 273 (386)
T 1u08_A 216 ASVLAHPQLRERAVAVSSFGKTYHM----TGWKVGYCVAPAPISAEIRKVHQ--------------YLTFSV----NTPA 273 (386)
T ss_dssp CCGGGSHHHHTTEEEEEEHHHHTTC----GGGCCEEEECCHHHHHHHHHHHH--------------HHTSSC----CHHH
T ss_pred cChhcccCccCcEEEEecchhhcCC----cccceEEEEcCHHHHHHHHHHHH--------------hhccCC----ChHH
Confidence 111 134689999999999853 24568999998776554321000 001111 1112
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
..++.++|.. +.+.+.+..++...+++++.+.|++. .+.+..+.+.. -+.++++.. ...+..++.++|. ++|
T Consensus 274 ~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~--~~~~~~~~~---~~~~~~~~~~~l~~~~g 346 (386)
T 1u08_A 274 QLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEILPCEGTY--FLLVDYSAV---STLDDVEFCQWLTQEHG 346 (386)
T ss_dssp HHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBSS--EEEEECTTT---CCSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCceE--EEEEecCCC---CCCCHHHHHHHHHHhCC
Confidence 2223334433 35567777777788899999999875 22221222212 145665421 0146789999887 689
Q ss_pred cccCC-CCCC----CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 820 FHGPT-MSWP----VPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 820 i~~~~-~~~p----~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
|.+.. ..|. .++.+|++++ .++++|+++++.|++
T Consensus 347 i~v~~g~~f~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 347 VAAIPLSVFCADPFPHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp EECEEGGGGCSSCCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred EEEeCchHhCCCCCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 98642 2232 2478999997 479999999998853
No 149
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.76 E-value=9.7e-17 Score=186.09 Aligned_cols=288 Identities=15% Similarity=0.190 Sum_probs=192.4
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHH-hcCCC-CCCEEEEc-CCCCCCCHHHHHHcC---------
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHK-ARGDH-HRNVCIIP-VSAHGTNPATAAMCG--------- 589 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~-~~G~~-~~~~Ili~-~saHg~~~~~a~~~G--------- 589 (946)
..++++.+++++|.+.+ +..++|++++++++.+++.|.. .+|.. ++++||++ .+.||....++...|
T Consensus 120 ~~~l~~~la~~~g~~~v-~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~ 198 (439)
T 2oat_A 120 LGEYEEYITKLFNYHKV-LPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFG 198 (439)
T ss_dssp HHHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSC
T ss_pred HHHHHHHHHHhcCCCEE-EEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCC
Confidence 45788889999987654 5677888888777777665532 23322 23677765 577888877766655
Q ss_pred ---CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc---cCHHHHHHHHHHcCCEEEEecccccccc
Q 002263 590 ---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 590 ---~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
.+++.+|. .|+++|+++++ .+++++|+++.. +.+|++. .++++|.++|++||+++++|+++.
T Consensus 199 p~~~~v~~~~~-----~d~~~le~~l~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~---- 267 (439)
T 2oat_A 199 PFMPGFDIIPY-----NDLPALERALQ--DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT---- 267 (439)
T ss_dssp SCCTTEEEECS-----SCHHHHHHHTT--STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT----
T ss_pred CCCCCeEEeCC-----CCHHHHHHHhC--CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 46777776 38999999995 267887777643 3468653 259999999999999999999863
Q ss_pred cccCCC------c--cCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 663 GLTSPG------Y--IGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 663 gl~~pg------~--~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
|+.+.| . ..+|++++ +|+|+ || .++|++++++++.+.+.... + ....+
T Consensus 268 g~g~~g~~~~~~~~~~~~Di~t~--sK~l~-----~G~~~~G~v~~~~~~~~~l~~~~---------~-----~~t~~-- 324 (439)
T 2oat_A 268 GLARTGRWLAVDYENVRPDIVLL--GKALS-----GGLYPVSAVLCDDDIMLTIKPGE---------H-----GSTYG-- 324 (439)
T ss_dssp TTTTTSSSSGGGGGTCCCSEEEE--CGGGG-----TTSSCCEEEEECHHHHTTSCTTS---------S-----CCSST--
T ss_pred CCccCCcchhHHHhCCCCcEEEe--ccccc-----CCCCCeEEEEECHHHHhccCCCC---------c-----ccCCC--
Confidence 232221 1 24698855 59884 34 56899999988776553210 0 01112
Q ss_pred ccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeeEEEecccccccCCCCHHH
Q 002263 734 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 810 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~ 810 (946)
++...++++.+.+..+..+++. ++...+++++.++|++. +.+. .++ .+.+ +.+++... .+.+..+
T Consensus 325 --~~~~~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~~-~g~~---~~v~l~~~---~~~~~~~ 392 (439)
T 2oat_A 325 --GNPLGCRVAIAALEVLEEENLA---ENADKLGIILRNELMKLPSDVVTAVRG-KGLL---NAIVIKET---KDWDAWK 392 (439)
T ss_dssp --TCHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHTTSCTTTEEEEEE-ETTE---EEEEECCC---SSCCHHH
T ss_pred --cCHHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHhcCCCcEEEEe-eeeE---EEEEEecC---ccHHHHH
Confidence 2344455566667766555443 44557788999999875 3321 112 1222 34454310 0145789
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 811 i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.++|.++|+.+.... .+.+|++++..+|++|+|+++++|++++++
T Consensus 393 l~~~l~~~Gv~v~~~~---~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 393 VCLRLRDNGLLAKPTH---GDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp HHHHHHHTTEECCBSS---SSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCeEEecCC---CCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999875322 478999999999999999999999988653
No 150
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.76 E-value=1.3e-17 Score=188.63 Aligned_cols=297 Identities=12% Similarity=0.079 Sum_probs=192.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
..++++.+++++|.+.. +.+++|+++...++.+++ ..++++|+++...|+.+...+...|++++.+++++++
T Consensus 40 ~~~l~~~la~~~~~~~~-~~~~~gt~a~~~~~~~~~-------~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (374)
T 3uwc_A 40 LEKFEKRFAALHNAPHA-IGVGTGTDALAMSFKMLN-------IGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGY 111 (374)
T ss_dssp HHHHHHHHHHHTTCSEE-EEESCHHHHHHHHHHHTT-------CCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTS
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHcC-------CCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCC
Confidence 56788999999998843 556677766544433321 1356899999998888777888999999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC--CCEEEeCC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG--ADVCHLNL 679 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G--aDi~~~s~ 679 (946)
.+|+++|+++++ +++++|+++ |.+|.+. ++++|+++|+++|+++++|+++.... ......++ .|++++++
T Consensus 112 ~~d~~~l~~~~~---~~~~~v~~~--n~~G~~~-~~~~i~~~~~~~~~~li~D~~~~~g~--~~~~~~~~~~~d~~~~s~ 183 (374)
T 3uwc_A 112 VIDPEKIEAAIT---DKTKAIMPV--HYTGNIA-DMPALAKIAKKHNLHIVEDACQTILG--RINDKFVGSWGQFACFSL 183 (374)
T ss_dssp SBCGGGTGGGCC---TTEEEECCB--CGGGCCC-CHHHHHHHHHHTTCEEEEECTTCTTC--EETTEETTSSSSEEEEEC
T ss_pred CcCHHHHHHhCC---CCceEEEEe--CCcCCcC-CHHHHHHHHHHcCCEEEEeCCCccCc--eeCCeeccccccEEEEeC
Confidence 999999999986 688888743 4679888 79999999999999999999875221 11111233 69999998
Q ss_pred C--cccccCCCCCCCcceeEEEec-ccCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 680 H--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 680 h--K~f~~P~g~GGPg~G~i~~~~-~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
| |+|+.+ | .+|++++++ .+.+.+.. ...+....+ .......+... .... +.+.....++
T Consensus 184 ~~~K~l~~~----g-~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~-----aa~~~~~~~~ 246 (374)
T 3uwc_A 184 HPLKNLNVW----S-DAGVIITHSDEYAEKLRLYRNHGLINRD---VCVEYGINCRM----DTIQ-----AVIANRLMNQ 246 (374)
T ss_dssp SSSSSSCCS----S-CCEEEEESCHHHHHHHHHHTBTTEEETT---EESSCCCBCBC----CHHH-----HHHHHHHGGG
T ss_pred CCCCcCCcc----c-eeEEEEeCCHHHHHHHHHHHhcCccccC---ccccccccCCC----CHHH-----HHHHHHHHHH
Confidence 8 987410 1 256777664 33222210 000000000 00000011110 1211 1122233456
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC-eeeccC-CC--ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCC-
Q 002263 756 LTEASKIAILNANYMAKRLEKHYP-ILFRGV-NG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPV- 829 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~-v~~~~~-~~--~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~- 829 (946)
+.+..++...+++++.+.|++... +..... .+ +.++.+.+.. .+..++.++|.++||.+.... .|.
T Consensus 247 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~L~~~gi~v~~~~~~~~~ 318 (374)
T 3uwc_A 247 LETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV--------KYRDQLFQYLKDNGIEVKIHYPIAMH 318 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE--------TTHHHHHHHHHHTTBCCBCSCSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc--------CCHHHHHHHHHHCCCccccCCCCccc
Confidence 677777777889999999987533 322211 11 1222333332 257899999999999865332 110
Q ss_pred ----------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 830 ----------------------PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 830 ----------------------~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+.+|++++..+|++|||+++++|++++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 319 LQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp GSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 167999999999999999999999988754
No 151
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.76 E-value=8.8e-17 Score=181.70 Aligned_cols=283 Identities=17% Similarity=0.163 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHhhCC--CcccccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 520 EMFNNLGEWLCTITGF--DSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 520 ~~~~el~~~la~l~G~--~~~~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
++...+.+++.+.+|. +...+..++|+ ++.. .+++.+. .++++|+++...|+.+...+...|.+++.+|
T Consensus 73 ~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~---~~~~~l~-----~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~ 144 (369)
T 3cq5_A 73 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ---QLLQAFG-----GPGRTALGFQPSYSMHPILAKGTHTEFIAVS 144 (369)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH---HHHHHHC-----STTCEEEEEESSCTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhhhhcccCCCChHhEEECCChHHHHH---HHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEec
Confidence 4555555666555554 33344444444 3433 3334331 2468899998888877777888999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCC----CccC
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIG 671 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p----g~~G 671 (946)
.++++.+|+++|++++++ .++++|++++|+ .+|.+. +++++.++++.+++++++|+++...... ..+ ..++
T Consensus 145 ~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~-~~~~l~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~ 220 (369)
T 3cq5_A 145 RGADFRIDMDVALEEIRA--KQPDIVFVTTPNNPTGDVT-SLDDVERIINVAPGIVIVDEAYAEFSPS-PSATTLLEKYP 220 (369)
T ss_dssp CCTTSSCCHHHHHHHHHH--HCCSEEEEESSCTTTCCCC-CHHHHHHHHHHCSSEEEEECTTGGGCCS-CCGGGGTTTCT
T ss_pred CCcCCCCCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEECCchhhcCC-cchHHHHhhCC
Confidence 887778999999999973 178889999995 689988 7999999999999999999987422111 111 1234
Q ss_pred -CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 672 -ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 672 -aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
.++++.++||+|+. +|.++|++++++++.+.+.... . ..+. +.....++.+.+..
T Consensus 221 ~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~-----------~-----~~~~----~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 221 TKLVVSRTMSKAFDF----AGGRLGYFVANPAFIDAVMLVR-----------L-----PYHL----SALSQAAAIVALRH 276 (369)
T ss_dssp TTEEEEEESSSTTSC----GGGCCEEEEECTHHHHHHHTTS-----------C-----TTCS----CHHHHHHHHHHHHT
T ss_pred CCEEEEEechHhcCC----cccceEEEEeCHHHHHHHHHcC-----------C-----CCCC----CHHHHHHHHHHhcC
Confidence 56888999999853 3567899999877654432110 0 0111 12222233334432
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 829 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~ 829 (946)
.+.+.+..++...+++++.+.|++. +.+ .+ ..+.+ +.++++ .+..++.++|.++|+.+.... .
T Consensus 277 --~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~-~~~~~---~~~~~~-------~~~~~l~~~l~~~gi~v~~~~--~ 340 (369)
T 3cq5_A 277 --SADTLGTVEKLSVERVRVAARLEELGYAV-VP-SESNF---VFFGDF-------SDQHAAWQAFLDRGVLIRDVG--I 340 (369)
T ss_dssp --HHHHHTHHHHHHHHHHHHHHHHHHHTCEE-EC-CSSSE---EEEECC-------SSHHHHHHHHHHTTEECBCCS--C
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhCCCEE-CC-CCCeE---EEEECC-------CCHHHHHHHHHHCCEEEEECC--C
Confidence 2345666677778889999999874 333 22 22322 345543 367889999999999875332 2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 830 PGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 830 ~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
++++|++++ +++|+++++++|++++
T Consensus 341 ~~~iRis~~---~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 341 AGHLRTTIG---VPEENDAFLDAAAEII 365 (369)
T ss_dssp TTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeC---CHHHHHHHHHHHHHHH
Confidence 478999997 7899999999998875
No 152
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.76 E-value=1.6e-17 Score=184.67 Aligned_cols=273 Identities=17% Similarity=0.129 Sum_probs=180.8
Q ss_pred HHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---ccc
Q 002263 103 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 179 (946)
Q Consensus 103 e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l 179 (946)
++++.+|+++|.+ +..++.+||.+++.++.++ .. +||+|+++...|+++...++.+++..|++++.++. +++
T Consensus 2 ~l~~~la~~~g~~--~~i~~~sG~~a~~~~~~~~-~~--~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l 76 (331)
T 1pff_A 2 ALEGKIAKLEHAE--ACAATASGMGAIAASVWTF-LK--AGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNI 76 (331)
T ss_dssp HHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHH-CC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHH
T ss_pred hHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHh-cC--CCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHH
Confidence 5678999999987 4556777787777666554 23 78999999999999988876544457999998875 456
Q ss_pred cc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHh-CCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCC
Q 002263 180 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 180 ~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~-~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
++ +++++++|++++| |.+|.+.|+++|.++|++ +|+++++|. ..+.+....+.++|+|++++|. |.|++| |+
T Consensus 77 ~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~d~~~~s~~K~~~~~---~~ 152 (331)
T 1pff_A 77 EKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDN-TFASPILTNPLDLGVDIVVHSATKYINGH---TD 152 (331)
T ss_dssp HHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEEC-TTTHHHHCCGGGGTCSEEEEETTTTTSSS---SS
T ss_pred HHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEEC-CCcccccCChhhcCCcEEEEECccccCCC---CC
Confidence 66 7888999999998 679999999999999999 999999943 3444433334478999999998 777643 33
Q ss_pred CceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHH
Q 002263 256 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 334 (946)
Q Consensus 256 P~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 334 (946)
+.+|++++++ ++.+++.....+ + ..++.|. ...++..+++ . .+...
T Consensus 153 r~~G~~~~~~~~~~~~l~~~~~~----------~-------------~~~~~~~---~~~~~~~~~l--~-----~~~~~ 199 (331)
T 1pff_A 153 VVAGLVCSRADIIAKVKSQGIKD----------I-------------TGAIISP---HDAWLITRGT--L-----TLDMR 199 (331)
T ss_dssp CCCEEEEECHHHHHHHHHTCCCC----------C-------------CCCCCCH---HHHHHHHHHH--H-----HHHHH
T ss_pred ceEEEEEeCcHHHHHHHHHHHHh----------h-------------cCCCCCH---HHHHHHHcCc--c-----hHHHH
Confidence 3368999998 776655211100 0 0011111 1111111121 1 12222
Q ss_pred HHHHHHHHHHHHHHHhcCC--------------CEEEcC---CCCcCeEEEecCCHHHHHHHHHHcCCeeeee-------
Q 002263 335 AQRVHGLAGTFALGLKKLG--------------TVEVQG---LPFFDTVKVKCADAHAIASAAYKIEMNLRVV------- 390 (946)
Q Consensus 335 ~~~~~~~a~~l~~~L~~~g--------------~~~~~~---~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~------- 390 (946)
.++...+...+.+.|++.. ++++.. ......+.|.+.+..++.+.|.++||.++..
T Consensus 200 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~~~s~g~~~s 279 (331)
T 1pff_A 200 VKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPES 279 (331)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHTCSSSEECSSCCSSSC
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHhCCCceeccCCCCcce
Confidence 2333444444555444321 122211 0122356676655678889999999965321
Q ss_pred -----------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -----------------------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -----------------------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++.+|+|++..+|++|+++++++|..
T Consensus 280 l~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 280 LIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp EEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred eeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 147899999999999999999999864
No 153
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.76 E-value=4.3e-17 Score=184.47 Aligned_cols=279 Identities=13% Similarity=0.064 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+|+++|.+ ++.++++||.+.+.++.++... +||+|+++...|+++...++. .|++++.++.
T Consensus 37 ~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~~~--~gd~Vi~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 108 (373)
T 3frk_A 37 EDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYDIG--FGDEVIVPSNTFIATALAVSY----TGAKPIFVEPDIR 108 (373)
T ss_dssp HHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEETTSCTHHHHHHHH----HSCEEEEECEETT
T ss_pred hHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCCcHHHHHHHHH----cCCEEEEEecccc
Confidence 4567889999999987 5888999998888777766433 789999999999999888753 3777777654
Q ss_pred ------ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCcc--ceEEEec--c-
Q 002263 177 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELG--ADIVVGS--A- 244 (946)
Q Consensus 177 ------~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~G--aDi~v~s--~- 244 (946)
+++++ +++++++|++++ .+|.+.|+++|.++|+++|+++++|. ..+.+.......+| +|+++.| .
T Consensus 109 ~~~~d~~~l~~~l~~~~~~v~~~n--~~G~~~~l~~i~~l~~~~~~~li~D~-a~~~g~~~~~~~~~~~~d~~~~S~~~~ 185 (373)
T 3frk_A 109 TYNIDPSLIESAITEKTKAIIAVH--LYGQPADMDEIKRIAKKYNLKLIEDA-AQAHGSLYKGMKVGSLGDAAGFSFYPA 185 (373)
T ss_dssp TTEECGGGTGGGCCTTEEEEEEEC--CTTCCCCHHHHHHHHHHHTCEEEEEC-TTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred ccCcCHHHHHHhcCCCCeEEEEEC--CCcCcccHHHHHHHHHHcCCEEEEEC-CcccCCEECCEeccccccEEEEeCcCC
Confidence 34556 778899988654 68999999999999999999999953 34544432333455 7999988 4
Q ss_pred ccccccCCCCCCceEEEEEch-hhhhcCCCceEeEeecCCCCc-ceEEecccccccccccccCCCccchHHHHHHHHHHH
Q 002263 245 QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKP-ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 322 (946)
Q Consensus 245 k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~-~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y 322 (946)
|.++. .+ ..|++++++ ++.+++.....+ |.. .|.. .+.|. |. .+.++.+++
T Consensus 186 K~l~~-~g----~gg~~~~~~~~~~~~~~~~~~~------g~~~~~~~----------~~~g~-~~----~~~~~~aa~- 238 (373)
T 3frk_A 186 KNLGS-LG----DGGAVVTNDKDLAEKIKALSNY------GSEKKYHH----------IYKGF-NS----RLDELQAGF- 238 (373)
T ss_dssp SSSCC-SS----SCEEEEESCHHHHHHHHHHHBT------TCSBTTBC----------CSCCC-BC----CCCHHHHHH-
T ss_pred CccCc-cc----eeEEEEeCCHHHHHHHHHHHhc------CcccCCcc----------ccccc-cC----CCCHHHHHH-
Confidence 55532 11 247777764 354433211100 100 0100 01111 11 011222222
Q ss_pred HHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-----CCcCeEEEecCCHHHHHHHHHHcCCeeeeec------
Q 002263 323 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-----PFFDTVKVKCADAHAIASAAYKIEMNLRVVD------ 391 (946)
Q Consensus 323 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-----~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~------ 391 (946)
.+...++++++.++..++++++++.|++++ +.+... ..+..+.+...+..++.+.|.++||.++...
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~ 316 (373)
T 3frk_A 239 -LRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSEKRDELQKYLNNNGIGTLIHYPIPIHL 316 (373)
T ss_dssp -HHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEESSHHHHHHHHHHTTBCCBCSCSSCGGG
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCCcccCcCCcccc
Confidence 222245678888999999999999999988 776532 1223455554458899999999999876321
Q ss_pred ---------------------CCeEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 392 ---------------------SNTVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 392 ---------------------~~~lris~~~~~t~edid~ll~~l~~~ 418 (946)
.+.+|++++.++|++|+++++++|+.-
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~ 364 (373)
T 3frk_A 317 QQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAW 364 (373)
T ss_dssp SGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred ChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 157999999999999999999999753
No 154
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.76 E-value=4.7e-17 Score=181.05 Aligned_cols=278 Identities=12% Similarity=0.127 Sum_probs=187.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
..++++.+++++|.+...+..++|++. +..++++.+ ++++|+++...|..+...++..|++++.++.++++
T Consensus 53 ~~~lr~~la~~~~~~~~~i~~t~G~~~--~l~~~~~~~-------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (337)
T 3p1t_A 53 EPRVMRKLAEHFSCPEDNLMLVRGIDE--CFDRISAEF-------SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDL 123 (337)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEESHHHH--HHHHHHHHS-------TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTS
T ss_pred hHHHHHHHHHHhCcCHHHEEEeCCHHH--HHHHHHHhc-------CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCC
Confidence 457888999999988655555555542 222333332 35789999988887777888999999999998888
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccc--cCCCccCCCEEEeC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL--TSPGYIGADVCHLN 678 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl--~~pg~~GaDi~~~s 678 (946)
.+|+++|+++ .+++++++++| |.+|.+. ++++|.++|++++. +++|.++.. ++.. ..+...+.++++.+
T Consensus 124 ~~d~~~l~~~-----~~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~-~ivDea~~~-~~~~~~~~~~~~~~~i~~~S 195 (337)
T 3p1t_A 124 LLDPNDLAQV-----SRDDCVVLANPSNPTGQAL-SAGELDQLRQRAGK-LLIDETYVD-YSSFRARGLAYGENELVFRS 195 (337)
T ss_dssp SBCHHHHTTC-----CTTEEEEEESSCTTTCCCC-CHHHHHHHHHHCSE-EEEECTTGG-GSSCSSSCCCCBTTEEEEEE
T ss_pred CCCHHHHHhh-----cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCc-EEEECCChh-hccccccccccCCCEEEEee
Confidence 9999998764 36789999999 5799998 79999999999996 667988642 2221 12223456788999
Q ss_pred CCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 758 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~ 758 (946)
++|+|+. .|.++|++++++++.+.+... ... .+. +.....++.+++.. .+.+.+
T Consensus 196 ~sK~~g~----~G~r~G~~~~~~~~~~~l~~~--------------~~~--~~~----~~~~~~a~~~~l~~--~~~~~~ 249 (337)
T 3p1t_A 196 FSKSYGL----AGLRLGALFGPSELIAAMKRK--------------QWF--CNV----GTLDLHALEAALDN--DRAREA 249 (337)
T ss_dssp SSSTTCC----TTTCCEEEECCHHHHHHHHTT--------------SCT--TCS----CHHHHHHHHHHHTC--HHHHHH
T ss_pred CchhccC----cchheEEEEeCHHHHHHHHhh--------------cCC--CCC----CHHHHHHHHHHhCC--HHHHHH
Confidence 9999853 467889999887665543211 000 111 11111222233321 233555
Q ss_pred HHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCCCCEEEEE
Q 002263 759 ASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLMIE 836 (946)
Q Consensus 759 ~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p~~~~lri~ 836 (946)
..++...+++++.+.|++. +.+. .+.+.+ +.+... +..++.+.|.++||.+.. ..|..++.+||+
T Consensus 250 ~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis 316 (337)
T 3p1t_A 250 HIAKTLAQRRRVADALRGLGYRVA--SSEANF---VLVENA--------AGERTLRFLRERGIQVKDAGQFGLHHHIRIS 316 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBC--CCSSSE---EEEECT--------TTHHHHHHHHHTTEECEEGGGGTCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCcCEEC--CCCCeE---EEEEcC--------CHHHHHHHHHHCCeEEEECccCCCCCeEEEe
Confidence 5566667788999999875 4332 222322 334432 346788899999998643 223346899999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHH
Q 002263 837 PTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 837 ~t~~~t~~eid~~~~aL~~i~~ 858 (946)
++ +++|+++|+++|+++.+
T Consensus 317 ~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 317 IG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp CC---CHHHHHHHHHHHHHHTC
T ss_pred cC---CHHHHHHHHHHHHHHhh
Confidence 86 79999999999988743
No 155
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.76 E-value=6e-18 Score=194.25 Aligned_cols=303 Identities=13% Similarity=0.073 Sum_probs=197.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--cc-c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~-~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|.+ .. . +..++|+++.. ++++.+. .++++|+++...|..+...+...|++
T Consensus 62 ~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~---~~~~~~~-----~~gd~Vl~~~~~y~~~~~~~~~~g~~ 133 (411)
T 2o0r_A 62 PGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIA---AAVLGLV-----EPGSEVLLIEPFYDSYSPVVAMAGAH 133 (411)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHH---HHHHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEeCCCcHhHHHHHHHcCCE
Confidence 466667777777777777854 32 3 34444454443 3344331 24688999988888888888999999
Q ss_pred EEEEcCCCC---CCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccc-cccc
Q 002263 592 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGL 664 (946)
Q Consensus 592 vv~v~~~~~---g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl 664 (946)
++.+|.+++ +.+|+++|+++++ +++++|++++| |.+|.+.+ ++++|+++|+++|+++++|+++... ..+-
T Consensus 134 ~~~v~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 210 (411)
T 2o0r_A 134 RVTVPLVPDGRGFALDADALRRAVT---PRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA 210 (411)
T ss_dssp EEEEECEEETTEEECCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred EEEeeccccccCCCCCHHHHHHhhc---cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 999998653 5699999999996 68999999999 56898852 4799999999999999999987421 1110
Q ss_pred --cCC----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 665 --TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 665 --~~p----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
... ...+.|+++.++||+|+. .|.++|++++++++.+.+..... . ...+.+.
T Consensus 211 ~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~~------------~--~~~~~~~---- 268 (411)
T 2o0r_A 211 RHLPLAGFDGMAERTITISSAAKMFNC----TGWKIGWACGPAELIAGVRAAKQ------------Y--LSYVGGA---- 268 (411)
T ss_dssp CCCCGGGSTTTGGGEEEEEEHHHHTTC----TTTCEEEEECCHHHHHHHHHHHH------------H--HTSCCCT----
T ss_pred CCcChhhccCCCCCEEEEeechhhcCC----ccceEEEEeeCHHHHHHHHHHHh------------h--ccCCCCh----
Confidence 011 124679999999999852 24568999998776554321000 0 0011111
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 816 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~- 816 (946)
....++.+.+.. +.+.+.+..++...+++++.+.|++. +.+. .+.+..+ +.++++.. .+.+..++.++|.
T Consensus 269 ~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~g~~--~~~~~~~~---~~~~~~~~~~~l~~ 340 (411)
T 2o0r_A 269 PFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEIGFAVH--DSYGTYF--LCADPRPL---GYDDSTEFCAALPE 340 (411)
T ss_dssp THHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHTCEEC--CCCBSSE--EEEECGGG---TCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCEec--CCCeeEE--EEEecCCC---CCCCHHHHHHHHHH
Confidence 111222333332 35667777777888899999999875 3332 2222221 44565421 1246788999887
Q ss_pred HCCcccCC-CCC-C------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPT-MSW-P------------VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 817 ~~Gi~~~~-~~~-p------------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
++||.+.. ..| + ..+.+||++. .++++++++++.|++++++.+
T Consensus 341 ~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 341 KVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC--KRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp HHSEECEEGGGGSCCC--------CCGGGCEEEECC--SCHHHHHHHHHHHGGGGC---
T ss_pred hCCEEEcChhhhCCCccccccccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHhccC
Confidence 67998632 122 1 2467999996 479999999999988765543
No 156
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.76 E-value=1e-17 Score=194.74 Aligned_cols=271 Identities=13% Similarity=0.069 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--c
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--K 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--~ 177 (946)
.+.++|+.+|+ +|.+ .++.+++|+|.++++++.++. . +||+|++++..|+++...+.. .|++++.++. +
T Consensus 58 ~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~-~--~gd~Vlv~~~~h~s~~~~~~~----~G~~~~~v~~~~~ 128 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFS-Q--KKGDILMARNVHKSVLHALDI----SQQEGHFIETHQS 128 (446)
T ss_dssp HHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTT-T--SSSCEEECTTCCHHHHHHHHH----HTCCEEECEEEEC
T ss_pred HHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhc-C--CCCEEEEecCccHHHHHHHHH----cCCeEEEEeCeec
Confidence 45678899999 9987 456678888888887777652 3 899999999999999998764 3666666654 2
Q ss_pred c---------ccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccC-----CCCCCCccceEEEe
Q 002263 178 D---------IDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI-----LKPPGELGADIVVG 242 (946)
Q Consensus 178 ~---------l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~-----l~~~~~~GaDi~v~ 242 (946)
+ +++ +++++++|++++||++|.+.|+++|+++||++|+++++|. .++... ..+..++|+|++++
T Consensus 129 ~~~~~~~~~d~~~l~~~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDe-a~~~~~~f~~~~~~~~~~g~Di~~~ 207 (446)
T 2x3l_A 129 PLTNHYNKVNLSRLNNDGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDE-AHGAHFGLQGFPDSTLNYQADYVVQ 207 (446)
T ss_dssp TTTSSEEEEEC-------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEEC-TTCTTTTSTTSCCCGGGGTCSEEEE
T ss_pred cccCcCCCCCHHHHcCCCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcc-hhhhhhccCCCCCChHHcCCCEEEE
Confidence 1 122 3567899999999999999999999999999999999953 223211 11234578999999
Q ss_pred cc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 243 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 243 s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|. |++++ ++++|++++++++++ +. + + +........+|+|. ..+.++.++.
T Consensus 208 S~~K~l~~-----~~g~g~l~~~~~~i~-~~-~-------------~------~~~~~~~~~~s~~~---~~~aal~~a~ 258 (446)
T 2x3l_A 208 SFHKTLPA-----LTMGSVLYIHKNAPY-RE-N-------------I------IEYLSYFQTSSPSY---LIMASLESAA 258 (446)
T ss_dssp CHHHHSSS-----CTTCEEEEEETTCTT-HH-H-------------H------HHHHHHHSCSSCCH---HHHHHHHHHH
T ss_pred CCcccccc-----ccccEEEEEcCCcCC-HH-H-------------H------HHHHHHHcCCCchH---HHHHHHHHHH
Confidence 98 65643 335799999877543 10 0 0 00000122344443 2222333333
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeeecCCeEEEEe
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVDSNTVTASF 399 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~~~~lris~ 399 (946)
.++...|.+++.++..++++++++. | ++++.......+.+.+++ +.++.+.|.++||.++....+.+|+++
T Consensus 259 --~~l~~~g~~~~~~~~~~l~~~l~~~----g-~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~~GI~v~~~g~~~iRi~~ 331 (446)
T 2x3l_A 259 --QFYKTYDSTLFFAKRAQLIECLENK----G-FEMLQVDDPLKLLIKYEGFTGHDIQNWFMNAHIYLELADDYQALAIL 331 (446)
T ss_dssp --HHHHHCCCHHHHHHHHHHHHHHHHH----T-CEEEECSSTTEEEEECTTSCHHHHHHHHHHTTEEESEECSSCEEEEC
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHc----C-CEECcCCCCeEEEEEeCCcCHHHHHHHHHHCCCEEEecCCCEEEEEe
Confidence 3444445556778888888888887 5 777632111236666654 788999999999998744567899999
Q ss_pred ccCCCHHHHHHHHHHHhC
Q 002263 400 DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 400 ~~~~t~edid~ll~~l~~ 417 (946)
+.++|++|+ +++++|..
T Consensus 332 ~~~~t~e~i-~l~~aL~~ 348 (446)
T 2x3l_A 332 PLWHHDDTY-LFDSLLRK 348 (446)
T ss_dssp CCCCTTCCC-CHHHHHHH
T ss_pred ecCCCHHHH-HHHHHHHH
Confidence 999999999 99998863
No 157
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.75 E-value=4.7e-17 Score=187.66 Aligned_cols=305 Identities=15% Similarity=0.138 Sum_probs=193.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-C
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~-~ 600 (946)
..++++.+++++|.+.+ +.+++|+++...++.++ . ++++|+++...|..+...+...|++++.+++++ +
T Consensus 54 ~~~l~~~la~~~~~~~v-~~~~ggt~al~~~l~~l-----~----~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~ 123 (424)
T 2po3_A 54 VREFEERVAGLAGVRHA-VATCNATAGLQLLAHAA-----G----LTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDT 123 (424)
T ss_dssp HHHHHHHHHHHHTSSEE-EEESCHHHHHHHHHHHH-----T----CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHc-----C----CCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCc
Confidence 55788899999998754 55667776664444332 1 247899999988888888889999999999986 5
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc--cCCCccCCCEEEeC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL--TSPGYIGADVCHLN 678 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl--~~pg~~GaDi~~~s 678 (946)
+.+|+++|+++++ +++++|++++ .+|... ++++|+++|+++|+++++|+++...+. + ...+.+ .|+++.+
T Consensus 124 ~~~d~~~l~~~i~---~~~~~v~~~~--~tG~~~-~l~~i~~la~~~~~~li~Dea~~~g~~-~~~~~~~~~-~di~~~S 195 (424)
T 2po3_A 124 GNLDPDQVAAAVT---PRTSAVVGVH--LWGRPC-AADQLRKVADEHGLRLYFDAAHALGCA-VDGRPAGSL-GDAEVFS 195 (424)
T ss_dssp SSBCHHHHGGGCC---TTEEEEEEEC--GGGCCC-CHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETTSS-SSEEEEE
T ss_pred CCcCHHHHHHhhC---cCCcEEEEEC--CCCCcC-CHHHHHHHHHHcCCEEEEECccccCCe-ECCeecccc-cCEEEEe
Confidence 7899999999986 6899999876 578887 899999999999999999998753221 1 111222 5899999
Q ss_pred CCcccccCCCCCCCcceeEEEe-cccCCCCCCC-ccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~-~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
+||+.+ ++|+++|+++++ +++.+.+... ..+....+ .......+... ....++.++ . ..+++
T Consensus 196 ~sk~K~----l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~---~~~~~g~~~~~----~~~~aa~~l---~--~~~~~ 259 (424)
T 2po3_A 196 FHATKA----VNAFEGGAVVTDDADLAARIRALHNFGFDLPG---GSPAGGTNAKM----SEAAAAMGL---T--SLDAF 259 (424)
T ss_dssp CCTTSS----SCCSSCEEEEESCHHHHHHHHHHHBTTTTCTT---CCTTCCCBCCC----CHHHHHHHH---H--HHHHH
T ss_pred CCCCCC----ccCCCCeEEEeCCHHHHHHHHHHHhcCccccc---cccccCcCCCc----CHHHHHHHH---H--HHHHH
Confidence 884443 234677888888 5554432110 00000000 00000000000 111111121 1 23456
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeecc-CCCc--eeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC-CC---
Q 002263 757 TEASKIAILNANYMAKRLEKHYPILFRG-VNGT--VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-PV--- 829 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~~v~~~~-~~~~--~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~-p~--- 829 (946)
++..++...+++++.+.|++...+.+.. +.+. .++.+.++++.. ..+.+..++.+.|.++||.+..... +.
T Consensus 260 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~ 337 (424)
T 2po3_A 260 PEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEA--TTGIHRDLVMEVLKAEGVHTRAYFSPGCHEL 337 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHH--HHSSCHHHHHHHHHHTTEECBCTTCSCGGGS
T ss_pred HHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCc--cchhhHHHHHHHHHHCCCceecccCCccccc
Confidence 6666777788889999997642232211 1111 123344554310 0135788999999999998754211 10
Q ss_pred -----------C-------CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 830 -----------P-------GTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 830 -----------~-------~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+ ..+++.+...+|++|+++++++|++++++..+
T Consensus 338 ~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~~ 388 (424)
T 2po3_A 338 EPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRGRE 388 (424)
T ss_dssp TTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 0 12777777889999999999999998877654
No 158
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.75 E-value=1.7e-16 Score=181.55 Aligned_cols=276 Identities=17% Similarity=0.119 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 177 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~- 177 (946)
+...++++.+++++|.+ ...++.+||++++.++.++ .. +||+|+++...|+++...++.+++..|++++.++..
T Consensus 65 ~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~-~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d 139 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTL-LR--PGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMAD 139 (398)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHH-CC--TTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTC
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH-hc--CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCC
Confidence 45667889999999987 4667888887777766655 23 789999999999999998876666789999998764
Q ss_pred --cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCC
Q 002263 178 --DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 252 (946)
Q Consensus 178 --~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~ 252 (946)
++++ +++++++|++++| |.+|.+.|+++|+++||++|+++++| +..+.+....+..+|+|+++.|. |.|++|
T Consensus 140 ~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D-~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~-- 216 (398)
T 1gc0_A 140 LQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVD-NTYCTPYLQRPLELGADLVVHSATKYLSGH-- 216 (398)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEE-CTTTHHHHCCGGGGTCSEEEEETTTTTTCS--
T ss_pred HHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCceEEEECCccccCCC--
Confidence 4555 7889999999998 67999999999999999999999995 34444444445578999999998 777643
Q ss_pred CCCCceEEEEEchhhhh-cCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH
Q 002263 253 YGGPHAAFLATSQEYKR-MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 331 (946)
Q Consensus 253 ~GGP~~g~l~~~~~~~~-~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl 331 (946)
|+|-+|+++++++.++ .+... + +. ...++.|. ...++..+++ +.+
T Consensus 217 -~~~~~G~l~~~~~~~~~~~~~~--------------------~--~~-~~~~~~~~---~~~~~~~~~l-------~~~ 262 (398)
T 1gc0_A 217 -GDITAGIVVGSQALVDRIRLQG--------------------L--KD-MTGAVLSP---HDAALLMRGI-------KTL 262 (398)
T ss_dssp -SSCCCEEEEECHHHHHHHHHTH--------------------H--HH-HTCCCCCH---HHHHHHHHHH-------TTH
T ss_pred -CCCeEEEEEEChHHHHHHHHHH--------------------h--hc-cCCCCCCH---HHHHHHHhcc-------chH
Confidence 2233589999877554 22100 0 00 00122221 1111111111 234
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEE--------------EcCC---CCcCeEEEecCC-HHHHHHHHHHcCCeeee----
Q 002263 332 KTIAQRVHGLAGTFALGLKKLGTVE--------------VQGL---PFFDTVKVKCAD-AHAIASAAYKIEMNLRV---- 389 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~g~~~--------------~~~~---~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~---- 389 (946)
+...++..+++.++++.|++.+.+. +..+ .....+.|.+++ ..++.+.|.+.||..+.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~i~~~~~s~G 342 (398)
T 1gc0_A 263 NLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQLFSRAVSLG 342 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHHHHHHHCSSSEECSCCS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHHHHHhCCCceeccCCC
Confidence 5556666778888888887753232 1111 123456777765 45677777777876432
Q ss_pred --------------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 --------------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 --------------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++..+++++|+++.++|.
T Consensus 343 ~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~ 395 (398)
T 1gc0_A 343 DAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALK 395 (398)
T ss_dssp CSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred CcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 014789999999999999999999985
No 159
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.75 E-value=6.8e-16 Score=173.74 Aligned_cols=298 Identities=11% Similarity=0.010 Sum_probs=206.9
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 138 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~ 138 (946)
++.|..+...|+.+.+.+.+....+.. |.. ....++++.+|+++|.++.++.+++|+|.+++.++.++ .
T Consensus 37 l~~~~~~~~~~~~v~~a~~~~~~~~~~---y~~-------~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~-~ 105 (363)
T 3ffh_A 37 LSSNENPLGTSKKVAAIQANSSVETEI---YPD-------GWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVL-L 105 (363)
T ss_dssp CSSCSCTTCCCHHHHHHHHTCBSCCCB---C-----------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH-C
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhc---CCC-------cchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHH-c
Confidence 355655666788887777754332222 321 12356789999999998889999999998888777665 2
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cCCCEeEEEEEcC-CCceeecchHHHHH
Q 002263 139 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIK 208 (946)
Q Consensus 139 ~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~ 208 (946)
. +||+|+++...|+++...++. .|++++.++.+ ++++ +++++++|++++| |.+|.+.|++++.+
T Consensus 106 ~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~ 179 (363)
T 3ffh_A 106 D--TTTNTVMATPTFVQYRQNALI----EGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQA 179 (363)
T ss_dssp S--TTCEEEEEESSCHHHHHHHHH----HTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred c--CCCEEEEcCCChHHHHHHHHH----cCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHH
Confidence 3 789999999999998877653 47888887653 4555 7789999999998 67999999999999
Q ss_pred HHHhC--CcEEEEEecCccc-c--CCCCC----CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeE
Q 002263 209 NAHAN--GVKVVMATDLLAL-T--ILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 278 (946)
Q Consensus 209 ~a~~~--gal~~v~a~~~al-~--~l~~~----~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~ 278 (946)
+++.+ |+++++|. ..+. . ..... ...+-+++++|. |.|+. +|..+|++++++++.+.+...
T Consensus 180 l~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~l~~~---- 250 (363)
T 3ffh_A 180 FLDRVPSDVLVVLDE-AYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGL----ASARVGYGIADKEIIRQLNIV---- 250 (363)
T ss_dssp HHTTSCTTSEEEEEC-TTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCC----SSCCCEEEEECHHHHHHHHHT----
T ss_pred HHHhCCCCcEEEEeC-chHhhcCccccCHHHHhhcCCCEEEEeechhhhcC----chhceeeeecCHHHHHHHHHh----
Confidence 99988 99999953 2221 1 11111 123445777776 76642 233459999998887665110
Q ss_pred eecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEE
Q 002263 279 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEV 357 (946)
Q Consensus 279 s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~ 357 (946)
+...+.|. ....+..++ +...+.++++.++..++.+++.+.|++ .| +++
T Consensus 251 ----------------------~~~~~~~~---~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g-~~~ 300 (363)
T 3ffh_A 251 ----------------------RPPFNTTS---IGQKLAIEA----IKDQAFIGECRTSNANGIKQYEAFAKRFEK-VKL 300 (363)
T ss_dssp ----------------------CCSCCCBH---HHHHHHHHH----HHCHHHHHHHHHHHHHHHHHHHHHHHHCTT-CEE
T ss_pred ----------------------CCCCCCCH---HHHHHHHHH----hcCHHHHHHHHHHHHHHHHHHHHHHhhCCC-ceE
Confidence 00011111 112222222 223467888999999999999999999 57 887
Q ss_pred cCCCCcCeEEEecCC-HHHHHHHHHHcCCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 358 QGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 358 ~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.... ..-+.+.++. ..++.++|.++||.++.- .++.+|+|++ |++|+++++++|+
T Consensus 301 ~~~~-~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~ 360 (363)
T 3ffh_A 301 YPAN-GNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALLE 360 (363)
T ss_dssp CCCC-SSEEEEECSSCHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHH
T ss_pred CCCC-CeEEEEECCCCHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHH
Confidence 6432 2235566664 889999999999988653 2579999987 9999999999986
No 160
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.75 E-value=1.5e-17 Score=189.62 Aligned_cols=302 Identities=14% Similarity=0.099 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC-C
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~-~ 599 (946)
...++++.+++++|.+.. +.+++|+++...++.+++ ..++++|+++...|..+...+...|++++.++++ +
T Consensus 57 ~~~~l~~~la~~~~~~~~-i~~~~gt~al~~~l~~~~-------~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 128 (391)
T 3dr4_A 57 FIVEFEKAFADYCGVKHA-IACNNGTTALHLALVAMG-------IGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPR 128 (391)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHHHT-------CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHcC-------CCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCcc
Confidence 356888999999998843 556777766544443331 1356899999998888888888999999999998 4
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccccc-CCCccCCCEEEeC
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGADVCHLN 678 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~-~pg~~GaDi~~~s 678 (946)
++.+|+++|+++++ +++++|++++ .+|.+. ++++|+++|+++|+++++|+++..+..... ..+.+ .|+.+++
T Consensus 129 ~~~~d~~~l~~~~~---~~~~~v~~~n--~tG~~~-~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~-~di~~~S 201 (391)
T 3dr4_A 129 TFNLDAAKLEALIT---PRTKAIMPVH--LYGQIC-DMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSL-GDCATFS 201 (391)
T ss_dssp TCSBCGGGSGGGCC---TTEEEECCBC--GGGCCC-CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SSEEEEE
T ss_pred ccCcCHHHHHHhcC---CCceEEEEEC--CCCChh-hHHHHHHHHHHcCCEEEEECcccccceECCeeeccc-CCEEEEE
Confidence 57899999999986 7898888654 579888 799999999999999999998753221111 11223 3677666
Q ss_pred --CCcccccCCCCCCCcceeEEEecc-cCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 679 --LHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 679 --~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
.||+|+ | +.+|++++++. +.+.+.. ...+...+. .........+... ....+ +.. ....+
T Consensus 202 ~s~~K~l~-----~-g~gg~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g~~~~~----~~l~a--a~~---~~~~~ 265 (391)
T 3dr4_A 202 FFGNAIIT-----T-GEGGMITTNDDDLAAKMRLLRGQGMDPNR-RYWFPIVGFNYRM----TNIQA--AIG---LAQLE 265 (391)
T ss_dssp CBTTSSSC-----C-BSCEEEEESCHHHHHHHHHHHBTTCCTTS-TTCCSSCCCBCBC----CHHHH--HHH---HHHHH
T ss_pred CCCCCcCC-----c-CCeEEEEECCHHHHHHHHHHHhcCCCCCC-cccccccccccCC----CHHHH--HHH---HHHHH
Confidence 668873 2 34567766643 3322210 000110000 0000000001111 12211 222 22235
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeec--cC-CCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC--
Q 002263 755 GLTEASKIAILNANYMAKRLEKH-YPILFR--GV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-- 828 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~-~~v~~~--~~-~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p-- 828 (946)
++.+..++...+++++.+.|++. +.+... .. ....++.+.+.++. ..+.+..++.++|.++||.+.....|
T Consensus 266 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~l~~~L~~~GI~v~~~~~p~~ 342 (391)
T 3dr4_A 266 RVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGE---GLSTTRDQVIKDLDALGIESRPVFHPMH 342 (391)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECS---SCSSCHHHHHHHHHHTTCCCEECCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECC---ccchhHHHHHHHHHHCCCceeecCCccc
Confidence 56677777778899999999886 443321 11 11233345555431 12567899999999999986432211
Q ss_pred -------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 829 -------------------VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 829 -------------------~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
....+|+++...+|++|||+++++|+++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 343 IMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp GSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred cChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 1257999999999999999999999865
No 161
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1e-17 Score=194.69 Aligned_cols=302 Identities=14% Similarity=0.128 Sum_probs=196.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+.+|.+ ... +.+++|+++...+ ++.+. .++++|+++...|..+...+...|.++
T Consensus 95 ~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~---~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 166 (447)
T 3b46_A 95 RGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSC---LMGLL-----NAGDEVIVFEPFFDQYIPNIELCGGKV 166 (447)
T ss_dssp TCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHH---HHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH---HHHHc-----CCCCEEEEeCCCchhHHHHHHHcCCEE
Confidence 466677777777777777754 223 4444445554433 34331 256899999988888888889999999
Q ss_pred EEEcCCCC------------CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccc
Q 002263 593 VSVGTDAK------------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGAN 657 (946)
Q Consensus 593 v~v~~~~~------------g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~ 657 (946)
+.+|.+++ +.+|+++|+++++ +++++|++++| |.+|.+- .++++|+++|++||+++++|+++
T Consensus 167 ~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~ 243 (447)
T 3b46_A 167 VYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT---SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVY 243 (447)
T ss_dssp EEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred EEEeCCCccccccccccccCcccCHHHHHHhhc---cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccc
Confidence 99998643 4799999999986 78999999999 4689873 26999999999999999999987
Q ss_pred cc-cccc-ccC-----CCccCCCEEEeCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 658 MN-AQVG-LTS-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 658 ~~-a~~g-l~~-----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
.. ...+ ..+ ++..+.|+++.++||+|+. .|.++|++++ ++++.+.+.... . ...
T Consensus 244 ~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~----~G~riG~~~~~~~~l~~~l~~~~--~------------~~~ 305 (447)
T 3b46_A 244 EHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAA----TGWRIGWVLSLNAELLSYAAKAH--T------------RIC 305 (447)
T ss_dssp TTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTC----TTSCCEEEECSCHHHHHHHHHHH--H------------HHT
T ss_pred hhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCC----cchhhEEEEeCCHHHHHHHHHHH--h------------hcc
Confidence 42 1111 011 2234789999999999853 3677999999 776654432100 0 001
Q ss_pred cccCccchhhHHHHHHHHHHHHc-HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccC---
Q 002263 730 IAAAPWGSALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTA--- 804 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a~l~~lG-~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~--- 804 (946)
.+.+ .....++.++|.... .+.+.+..++...+++++.+.|++. +.+. .+.+..+ +.++++......
T Consensus 306 ~~~~----~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~g~~--~~~~~~~~~~p~~~~ 377 (447)
T 3b46_A 306 FASP----SPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYT--APEGTYF--VLVDFSKVKIPEDYP 377 (447)
T ss_dssp SSCC----HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEE--CCSBSSE--EEEECTTCCCCTTCC
T ss_pred CCCC----hHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeec--CCCeeEE--EEEecccccCccccc
Confidence 1111 112222334444332 3346666677778889999999875 4442 2222222 345654321000
Q ss_pred -------CCCHHHHHHHHH-HCCcccCC-CCCC-------CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 805 -------GIEPEDVAKRLM-DYGFHGPT-MSWP-------VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 805 -------g~~~~~i~~~L~-~~Gi~~~~-~~~p-------~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+.+..+++++|. ++|+.+.. ..|. ..+.+|+++.. ++++|++.++.|+++
T Consensus 378 ~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~--~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 378 YPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK--DDAYLENAVERLKLL 443 (447)
T ss_dssp CCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS--CHHHHHHHHHHGGGG
T ss_pred cccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC--CHHHHHHHHHHHHHH
Confidence 134668999887 58998632 2231 15789999974 789999999888753
No 162
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.75 E-value=2.8e-17 Score=185.13 Aligned_cols=279 Identities=15% Similarity=0.112 Sum_probs=187.6
Q ss_pred HHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++.+++++|.+... +..++|+++...+ ++.+. .++++|+++...|..+...+...|++++.++.++++
T Consensus 68 ~~lr~~la~~~g~~~~~i~~t~g~~~al~~~---~~~l~-----~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 139 (360)
T 3hdo_A 68 QKLREVAGELYGFDPSWIIMANGSDEVLNNL---IRAFA-----AEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDF 139 (360)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHH---HHHHC-----CTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTS
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHHHHHHH---HHHHh-----CCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCC
Confidence 36788999999976544 4445565555433 33321 246899999888877777788999999999997766
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCC----CccCCCEEE
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADVCH 676 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p----g~~GaDi~~ 676 (946)
.+ +++.+++ +++++++++| |.+|.+. ++++|.++|+++|+++++|+++.. +.+- .+ ...+.++++
T Consensus 140 ~~--~~l~~~~-----~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~li~De~~~~-~~~~-~~~~~~~~~~~~i~~ 209 (360)
T 3hdo_A 140 RI--AGFPERY-----EGKVFFLTTPNAPLGPSF-PLEYIDELARRCAGMLVLDETYAE-FAES-NALELVRRHENVVVT 209 (360)
T ss_dssp SB--TTCCSSB-----CSSEEEEESSCTTTCCCC-CHHHHHHHHHHBSSEEEEECTTGG-GSSC-CCTHHHHHCSSEEEE
T ss_pred CH--HHHHhhc-----CCCEEEEeCCCCCCCCCc-CHHHHHHHHHHCCCEEEEECChHh-hCCc-chhHHhccCCCEEEE
Confidence 55 4443322 3458888999 4689998 799999999999999999998752 2221 11 123456788
Q ss_pred eCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
.+++|+|+. +|.++|++.+++++.+.+... . . ..+. +.....++.+++.. .+.+
T Consensus 210 ~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~------------~--~--~~~~----~~~~~~a~~~~l~~--~~~~ 263 (360)
T 3hdo_A 210 RTLSKSYSL----AGMRIGLAIARPEVIAALDKI------------R--D--HYNL----DRLAQAACVAALRD--QAYL 263 (360)
T ss_dssp EESTTTTSC----TTSCCEEEECCHHHHHHHHHH------------S--C--SCCS----CHHHHHHHHHHHHC--HHHH
T ss_pred ecchHhhcC----CccceeeEeeCHHHHHHHHHh------------C--C--CCCC----CHHHHHHHHHHhcC--HHHH
Confidence 899999853 467889999887766543210 0 0 0111 12222233344442 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-CCCEEEE
Q 002263 757 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGTLMI 835 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p-~~~~lri 835 (946)
.+..++...+++++.+.|++. .+.+..+.+.+ +.+.++ +.+..++.++|.++||.+.....+ ..+.+||
T Consensus 264 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~---~~~~~~------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRi 333 (360)
T 3hdo_A 264 SECCRRIRETREWFTTELRSI-GYDVIPSQGNY---LFATPP------DRDGKRVYDGLYARKVLVRHFSDPLLAHGMRI 333 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSE---EEEECT------TCCHHHHHHHHHHTTEECBCCCSTTTTTSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEEcCCCccE---EEEECC------CCCHHHHHHHHHHCCEEEEECCCCCCCCEEEE
Confidence 677777788899999999875 32221222322 344543 457899999999999987543322 3588999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+++ +++|+|+|+++|+++.+
T Consensus 334 s~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 334 SIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp ECC---CHHHHHHHHHHHHHHHC
T ss_pred EcC---CHHHHHHHHHHHHHHhc
Confidence 986 89999999999988754
No 163
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.75 E-value=1.1e-17 Score=191.92 Aligned_cols=298 Identities=12% Similarity=0.064 Sum_probs=195.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD---SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~---~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|.+ ... +.+++|+++...+ ++.+. .++++|+++...|..+...+...|.+
T Consensus 85 ~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~---~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 156 (404)
T 2o1b_A 85 HGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAV---PTCVI-----NPGDYVLLPDPGYTDYLAGVLLADGK 156 (404)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHH---HHHHC-----CTTCEEEEEESCCSSHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHH---HHHhc-----CCCCEEEEcCCCchhHHHHHHHCCCE
Confidence 455556666666666666875 123 4445555555433 33321 24588999988888888888899999
Q ss_pred EEEEcCCCCC-CCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccccc-cc-cc
Q 002263 592 IVSVGTDAKG-NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 665 (946)
Q Consensus 592 vv~v~~~~~g-~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l~ 665 (946)
++.++.++++ .+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.... .+ ..
T Consensus 157 ~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 233 (404)
T 2o1b_A 157 PVPLNLEPPHYLPDWSKVDSQII---DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNP 233 (404)
T ss_dssp EEEEECCTTTCCCCGGGSCHHHH---HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCC
T ss_pred EEEeccCcccCcCCHHHHHHhhc---cCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 9999987644 589999999997 678999999885 5898852 48999999999999999999874211 12 00
Q ss_pred CCCc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 666 SPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 666 ~pg~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
.... .+.|+++.++||+|+. +|.++|++++++++.+.+...... . ..+. +....
T Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~l~~~~~~------------~--~~~~----~~~~~ 291 (404)
T 2o1b_A 234 SILASENGKDVAIEIYSLSKGYNM----SGFRVGFAVGNKDMIQALKKYQTH------------T--NAGM----FGALQ 291 (404)
T ss_dssp CGGGSTTHHHHEEEEEESTTTTTC----GGGCCEEEEECHHHHHHHHHHHHH------------H--CCCC----CHHHH
T ss_pred ChhhcCCCCCCEEEEEecchhccC----chhheEeEecCHHHHHHHHHHHhh------------c--cCCC----CHHHH
Confidence 1111 2457888999999853 356789999887766543210000 0 0111 12222
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
.++.++|.. +.+.+.+..++...+.+++.+.|++. +.+. . +.+..+ +.++++ .+.+..++.++|. ++|
T Consensus 292 ~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~~~g~~--~~~~~~-----~~~~~~~l~~~l~~~~g 361 (404)
T 2o1b_A 292 DAAIYALNH-YDDFLEEQSNVFKTRRDRFEAMLAKADLPFV-H-AKGGIY--VWLETP-----PGYDSEQFEQFLVQEKS 361 (404)
T ss_dssp HHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE-C-CCBSSE--EEEECC-----TTCCHHHHHHHHHHHHC
T ss_pred HHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhcCCeec-C-CCcceE--EEEeCC-----CCCCHHHHHHHHHHHCC
Confidence 223334433 35566777777778889999999875 4432 2 222221 345654 2457789999987 579
Q ss_pred cccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 820 i~~~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
|.+... .|. ..+.+||+++. ++++++++++.|+++++
T Consensus 362 i~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 362 ILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAY 401 (404)
T ss_dssp EECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGG
T ss_pred EEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHH
Confidence 986432 232 25789999985 67899999998887654
No 164
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.75 E-value=2.8e-16 Score=184.14 Aligned_cols=323 Identities=17% Similarity=0.163 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC-------
Q 002263 520 EMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~------- 590 (946)
+...++.++++++++.+. ..++.++|++++++++.+++.|+..+|..++++||+ ..++||....+....|.
T Consensus 97 ~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~ 176 (476)
T 3i5t_A 97 SPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNF 176 (476)
T ss_dssp HHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTS
T ss_pred HHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhcccc
Confidence 456688999999986432 236678999999999998888887788766777775 56778888776554332
Q ss_pred -----EEEEEcCCC--CC-CCC--------HHHHHHHHHhcC-CCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCC
Q 002263 591 -----KIVSVGTDA--KG-NIN--------IEELRKAAEANR-DNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGG 649 (946)
Q Consensus 591 -----~vv~v~~~~--~g-~~D--------~e~L~~~i~~~~-~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ 649 (946)
.+..++... .+ ..| +++|++++++.. +++++|+++.++ ..|++.++ +++|+++|++||+
T Consensus 177 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gi 256 (476)
T 3i5t_A 177 DIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDI 256 (476)
T ss_dssp CCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred CCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 233444321 11 122 889999997543 567888877663 56765422 9999999999999
Q ss_pred EEEEecccccccccccCCCc-------c--CCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCC
Q 002263 650 QVYMDGANMNAQVGLTSPGY-------I--GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIP 719 (946)
Q Consensus 650 ll~vD~a~~~a~~gl~~pg~-------~--GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~ 719 (946)
+||+|.++. |+.+.|. + .+|+++++ |+++ || .++|++++++++.+.+.......
T Consensus 257 llI~DEv~~----g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~-----~G~~plg~v~~~~~i~~~~~~~~~~~----- 320 (476)
T 3i5t_A 257 LYISDEVVT----GFGRCGEWFASEKVFGVVPDIITFA--KGVT-----SGYVPLGGLAISEAVLARISGENAKG----- 320 (476)
T ss_dssp EEEEECTTT----TTTTTSSSCHHHHTTCCCCSEEEEC--GGGG-----TTSSCCEEEEECHHHHHTTSGGGCTT-----
T ss_pred EEEEEeccc----CCccccCceeeecccCCCcchhhhh--hhhc-----CCCcCeEEEEECHHHHHHHhcCCccc-----
Confidence 999998753 3333321 2 36888774 9874 46 78999999988776553210000
Q ss_pred CCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEE
Q 002263 720 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIV 795 (946)
Q Consensus 720 ~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~ 795 (946)
+.. ...+. +.++.+.++++.+.|..+..+++.+ +...+.++++++|+++ +... ..+ .+.+ +.+
T Consensus 321 -~~~-~~~~t----~~~np~a~aAa~aaL~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~v~~v~~-~G~~---~~i 387 (476)
T 3i5t_A 321 -SWF-TNGYT----YSNQPVACAAALANIELMEREGIVD---QAREMADYFAAALASLRDLPGVAETRS-VGLV---GCV 387 (476)
T ss_dssp -CEE-CCCCT----TTTCHHHHHHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHTTTTSTTEEEEEE-ETTE---EEE
T ss_pred -ccc-cccCC----CCcCHHHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHhcCCCeEEEEe-cCce---eEE
Confidence 000 00011 2234555666677777665555544 3446777888888753 2211 111 1222 234
Q ss_pred ecccccccCCC-------CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 002263 796 DLRGLKNTAGI-------EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKA 868 (946)
Q Consensus 796 ~~~~~~~~~g~-------~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~ 868 (946)
++..... +.. ...++.++|.++|+.+... ++.+||+|+...|+++||+++++|+++++++.+ +-|.-
T Consensus 388 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~-~~~~~ 461 (476)
T 3i5t_A 388 QCLLDPT-RADGTAEDKAFTLKIDERCFELGLIVRPL----GDLCVISPPLIISRAQIDEMVAIMRQAITEVSA-AHGLT 461 (476)
T ss_dssp EECCC------CCHHHHHHHHHHHHHHHHTTEECEEE----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred EEecCcc-ccccccchhHHHHHHHHHHHHCCCEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH-HhCcc
Confidence 4331100 000 1567889999999987532 389999999999999999999999999988776 45766
Q ss_pred CCCCchhcc
Q 002263 869 DIHNNVLKG 877 (946)
Q Consensus 869 ~~~~~~~~~ 877 (946)
.|+|..+..
T Consensus 462 ~~~~~~~~~ 470 (476)
T 3i5t_A 462 AKEPAAVEG 470 (476)
T ss_dssp ---------
T ss_pred ccccccccc
Confidence 677766654
No 165
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.75 E-value=2.3e-17 Score=187.75 Aligned_cols=307 Identities=16% Similarity=0.113 Sum_probs=193.7
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
..++++.+++++|.+.+ +..++|+++...++.+++ ..++++|+++...|+.+...+...|++++.++++++
T Consensus 41 ~~~l~~~la~~~~~~~~-~~~~~gt~al~~~~~~~~-------~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 112 (393)
T 1mdo_A 41 NQELEAAFCRLTGNQYA-VAVSSATAGMHIALMALG-------IGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDT 112 (393)
T ss_dssp HHHHHHHHHHHHCCSEE-EEESCHHHHHHHHHHHTT-------CCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHhCCCcE-EEecChHHHHHHHHHHcC-------CCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCc
Confidence 55788999999998754 455667666544433321 135688999999888877788899999999999875
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC-CCEEEeCC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG-ADVCHLNL 679 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G-aDi~~~s~ 679 (946)
+.+|+++|+++++ +++++|++++ .+|.+. ++++|.++|+++|+++++|+++..+... ....+| .|++++|+
T Consensus 113 ~~~d~~~l~~~l~---~~~~~v~~~~--~~G~~~-~~~~i~~l~~~~~~~li~D~a~~~g~~~--~~~~~~~~d~~~~S~ 184 (393)
T 1mdo_A 113 LMVTPEHIEAAIT---PQTKAIIPVH--YAGAPA-DLDAIYALGERYGIPVIEDAAHATGTSY--KGRHIGARGTAIFSF 184 (393)
T ss_dssp CCBCHHHHHHHCC---TTEEEECCBC--GGGCCC-CHHHHHHHHHHHTCCBCEECTTCTTCEE--TTEETTSSSEEEEEC
T ss_pred CCCCHHHHHHhcC---CCceEEEEeC--CCCCcC-CHHHHHHHHHHcCCeEEEECccccCCeE--CCeecCCCCeEEEeC
Confidence 6899999999996 6899998875 478887 7999999999999999999987532211 111246 89999999
Q ss_pred C--cccccCCCCCCCcceeEEEe-cccCCCCCC-CccccCCCC-C------CCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 680 H--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI-P------APEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 680 h--K~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~~d~-~------~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
| |+++ |+.+|+++++ +++.+.+.. ...+...+. . .+..+..+... +...+...++.+...
T Consensus 185 ~k~K~l~------~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~a~~~~~- 255 (393)
T 1mdo_A 185 HAIKNIT------CAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGY--KYNLPDLNAAIALAQ- 255 (393)
T ss_dssp CTTSSSC------SSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCC--BCCCCHHHHHHHHHH-
T ss_pred CCCCccc------cccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCc--cCCCCHHHHHHHHHH-
Confidence 9 6652 2357888886 454432210 000100000 0 00000000000 000012222222222
Q ss_pred HHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccC-CC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 749 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGV-NG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 749 ~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~-~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
.+++++..++..++++++.+.|++. +.+..... .. ...+.+.+.++.- ..+.+..++.++|.++||.+...
T Consensus 256 ----l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~~~l~~~gi~v~~~ 329 (393)
T 1mdo_A 256 ----LQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEA--RCGITRDALMASLKTKGIGTGLH 329 (393)
T ss_dssp ----HHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHH--HHSSCHHHHHHHHHHTTBCCBCC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEeccc--ccccCHHHHHHHHHhCCCCcccc
Confidence 2346666666778889999999875 33321110 00 0112245665410 00357889999999999987543
Q ss_pred CCC---------------C-------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 826 SWP---------------V-------PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 826 ~~p---------------~-------~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..| . ...+|+++...+|++|+++++++|+++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 330 FRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp CCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred cCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 222 0 237999999889999999999999887554
No 166
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.75 E-value=3.1e-16 Score=176.59 Aligned_cols=315 Identities=11% Similarity=0.045 Sum_probs=202.6
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCC-ccccc------cCCChhhhhhhHHHHHHHHHHHHHHHhCCCCc-ceE-EcccHHHH
Q 002263 58 FIGMGYYNTHVPPVILRNIMENP-AWYTQ------YTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NAS-LLDEGTAA 128 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~-~~~t~------~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~-~~s-l~~~~Ta~ 128 (946)
++..| +..+|+.+.+.+.+.. .|... ++.+ +.+..+...++++.+++++|++.. ++. ++.|+|.+
T Consensus 7 l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a 80 (362)
T 2c0r_A 7 NFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHR----GAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQ 80 (362)
T ss_dssp ECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT----SHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHH
T ss_pred eccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCC----cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHH
Confidence 34555 3468888877776533 12110 1111 234456778899999999999764 654 55888988
Q ss_pred HHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---------cccc--cCCCEeEEEEEcC-CC
Q 002263 129 AEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---------DIDY--KSGDVCGVLVQYP-GT 196 (946)
Q Consensus 129 ~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~---------~l~~--i~~~t~~v~v~~p-n~ 196 (946)
+.+++.++. . +||+|++....|.+.. +...++..| +++.++.+ ++++ ++++|++|++++| |.
T Consensus 81 ~~~~~~~l~-~--~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~ 154 (362)
T 2c0r_A 81 FAMIPMNFL-K--EGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETI 154 (362)
T ss_dssp HHHHHHHHC-C--TTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETT
T ss_pred HHHHHHhcC-C--CCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEecccccccccCCCHHHcccCCCcCEEEEeCCcCc
Confidence 887776652 3 7899988766554421 111122346 66655432 2222 5778999999987 78
Q ss_pred ceee-cchHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCC
Q 002263 197 EGEV-LDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 273 (946)
Q Consensus 197 ~G~i-~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~ 273 (946)
+|.+ .|+++| +|++++||. ..+.+... +..+ .|++++|+ |+|+ | +|+||+++++++++.+..
T Consensus 155 tG~~~~~l~~i------~~~~vivD~-a~~~~~~~~~~~~--~d~~~~s~~K~~g-~-----~G~G~l~~~~~~~~~l~~ 219 (362)
T 2c0r_A 155 EGAQFKAFPDT------GSVPLIGDM-SSDILSRPFDLNQ--FGLVYAGAQKNLG-P-----SGVTVVIVREDLVAESPK 219 (362)
T ss_dssp TTEECSSCCCC------TTSCEEEEC-TTTTTSSCCCGGG--CSEEEEETTTTTC-C-----SSCEEEEEEGGGSSSCCT
T ss_pred cceeccccccc------CCCEEEEEC-hhhccCCccchhH--CcEEEEecccccc-C-----cCcEEEEEcHHHHhhccc
Confidence 9995 788887 799999953 34554332 1223 49999998 6653 3 358999999988776632
Q ss_pred ceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcC
Q 002263 274 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL 352 (946)
Q Consensus 274 ~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~ 352 (946)
.. + +.+++.. .+......+|+|. ....++.+++ .++..+ |++++.++..++++++++.|+++
T Consensus 220 ~~----------~-~~~~~~~-~~~~~~~~~t~~~---~~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 282 (362)
T 2c0r_A 220 HL----------P-TMLRYDT-YVKNNSLYNTPPS---FGIYMVNEVL--KWIEERGGLEGVQQANRKKASLIYDAIDQS 282 (362)
T ss_dssp TS----------C-GGGCHHH-HHHTTTCSSCCCH---HHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cC----------c-hHHhHHH-HhhccCcCCCchH---HHHHHHHHHH--HHHHHhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 10 1 1111100 0000112355554 3344444444 444444 79999999999999999999998
Q ss_pred CCE-EEcCCC---CcCeEEEecCC---HHHHHHHHHHcCCeeeee--cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 353 GTV-EVQGLP---FFDTVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 353 g~~-~~~~~~---~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
|++ ++...+ ....+.+.+++ +.++.+.|.++||.+..- ..+.+|+|++.++|++|+++++++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~ 355 (362)
T 2c0r_A 283 GGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFME 355 (362)
T ss_dssp TTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCccccCCChHHcCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 635 765321 12346666653 678999999999976432 14679999999999999999999986
No 167
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.75 E-value=9.7e-18 Score=191.49 Aligned_cols=297 Identities=11% Similarity=0.101 Sum_probs=190.6
Q ss_pred HHHHHHHHHhhCCCcccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++.+++++|.+...+..++| +++.. ++++.+. .++++|+++...|..+...+...|.+++.+|.++++
T Consensus 77 ~~l~~~la~~~g~~~~~v~~~~g~~~al~---~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 148 (397)
T 2zyj_A 77 APLRAFVAEWIGVRPEEVLITTGSQQALD---LVGKVFL-----DEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG 148 (397)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESHHHHHHH---HHHHHHC-----CTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE
T ss_pred HHHHHHHHHHhCCChhhEEEeccHHHHHH---HHHHHhC-----CCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC
Confidence 35677888888876544444444 44443 3334331 245789998887766666788899999999987766
Q ss_pred CCCHHHHHHHHHhcCCCeEEE-EEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccc-ccc--cCCCccCCC-
Q 002263 602 NINIEELRKAAEANRDNLSTL-MVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGL--TSPGYIGAD- 673 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~v-vvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl--~~pg~~GaD- 673 (946)
+|+++|++++++ .++++| ++++| |.+|.+.+ ++++|+++|+++|+++++|+++.... .+- .....++.|
T Consensus 149 -~d~~~l~~~l~~--~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 225 (397)
T 2zyj_A 149 -PDLDALEEVLKR--ERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREA 225 (397)
T ss_dssp -ECHHHHHHHHHH--CCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHH
T ss_pred -CCHHHHHHHHhh--cCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCccc
Confidence 999999999973 267777 45777 56888752 36699999999999999999864211 111 111223333
Q ss_pred -----EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 674 -----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 674 -----i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
+++.++||+|+ +|.++|++++++++.+.+...... ...+++ .....++.++|
T Consensus 226 ~~~~~i~~~s~sK~~~-----~G~r~G~~~~~~~~~~~l~~~~~~--------------~~~~~~----~~~~~a~~~~l 282 (397)
T 2zyj_A 226 GYPGVIYLGSFSKVLS-----PGLRVAFAVAHPEALQKLVQAKQG--------------ADLHTP----MLNQMLVHELL 282 (397)
T ss_dssp TCCCEEEEEESTTTTC-----GGGCCEEEECCHHHHHHHHHHHHH--------------HHSSCC----HHHHHHHHHHH
T ss_pred CCCeEEEEeccccccc-----ccceeEEEecCHHHHHHHHHHHHh--------------hcCCCC----HHHHHHHHHHH
Confidence 77889999985 356789999987765543210000 001111 11122233333
Q ss_pred HHHcH-hhHHHHHHHHHHHHHHHHHHHhccC--CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-
Q 002263 749 AMMGS-KGLTEASKIAILNANYMAKRLEKHY--PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT- 824 (946)
Q Consensus 749 ~~lG~-eGl~~~~~~~~~~a~~l~~~L~~~~--~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~- 824 (946)
.. +. +.+++..++...+++++.+.|++.+ .+.+..+.+.. -+.++++ .+.+..++.++|.++||.+..
T Consensus 283 ~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~--~~~~~~~-----~~~~~~~~~~~l~~~gi~v~~g 354 (397)
T 2zyj_A 283 KE-GFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGM--FVWMELP-----KGLSAEGLFRRALEENVAFVPG 354 (397)
T ss_dssp TT-THHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSS--EEEEECS-----TTCCHHHHHHHHHHTTEEEEES
T ss_pred Hh-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccE--EEEEEcC-----CCCCHHHHHHHHHHCCCEEech
Confidence 32 21 3456666667778889999998642 23221222222 1446654 246788999999999998642
Q ss_pred CCCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 825 MSWP----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 825 ~~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..|. ..+.+||+++.. ++++++++++.|.++++++.+
T Consensus 355 ~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 355 GPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp GGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 2231 257899999875 899999999999999877643
No 168
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.75 E-value=7.8e-17 Score=181.41 Aligned_cols=280 Identities=16% Similarity=0.176 Sum_probs=183.7
Q ss_pred HHHHHHHHHhhCCCcccccCCch-HHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~-~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.++++.+++++|.+...+..++| +++.. ++++.+. .++ ++|+++...|..+...+...|.+++.+|.+++
T Consensus 61 ~~lr~~la~~~~~~~~~v~~~~G~~~ai~---~~~~~~~-----~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~ 132 (356)
T 1fg7_A 61 KAVIENYAQYAGVKPEQVLVSRGADEGIE---LLIRAFC-----EPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDN 132 (356)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESHHHHHHH---HHHHHHC-----CTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTT
T ss_pred HHHHHHHHHHhCCChHHEEEcCCHHHHHH---HHHHHHh-----CCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCC
Confidence 46788899999987655444445 44443 3344431 145 78999988887777778889999999999877
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccccccc--ccC-CCccCCCE
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVG--LTS-PGYIGADV 674 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~g--l~~-pg~~GaDi 674 (946)
+.+|+++|+++++ ++++|++++|| .+|.+.+ ++++|+++|+ +|+++++|+++.....+ +.. ....+.++
T Consensus 133 ~~~d~~~l~~~i~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i 207 (356)
T 1fg7_A 133 WQLDLQGISDKLD----GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLA 207 (356)
T ss_dssp SCCCHHHHHTSCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEE
T ss_pred CCCCHHHHHHHhc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEE
Confidence 7899999988873 78999999995 6898862 3556666666 99999999987521101 111 12345678
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
++.+++|+|+. +|.++|++.+++++.+.+... + . ..+. +.....++.++ +...
T Consensus 208 ~~~s~sK~~g~----~G~r~G~~~~~~~~~~~l~~~------------~--~--~~~~----~~~~~~a~~~~---l~~~ 260 (356)
T 1fg7_A 208 ILRTLSKAFAL----AGLRCGFTLANEEVINLLMKV------------I--A--PYPL----STPVADIAAQA---LSPQ 260 (356)
T ss_dssp EEEESSSTTCC----GGGCCEEEEECHHHHHHHHHH------------S--C--SSCS----CHHHHHHHHHH---TSHH
T ss_pred EEecchHhhcC----chhhhEEEEeCHHHHHHHHHh------------c--C--CCCC----CHHHHHHHHHH---hcCc
Confidence 88899999853 367789999987765543210 0 0 0111 11112222233 3333
Q ss_pred h---HHHHHHHHHHHHHHHHHHHhccCCe-eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CC-CC
Q 002263 755 G---LTEASKIAILNANYMAKRLEKHYPI-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MS-WP 828 (946)
Q Consensus 755 G---l~~~~~~~~~~a~~l~~~L~~~~~v-~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~-~p 828 (946)
+ +.+..++...+++++.+.|++.-.+ ......+.+ +.++++ +..++.++|.++||.+.. .. |.
T Consensus 261 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~~~--------~~~~l~~~L~~~gI~v~~~g~~~~ 329 (356)
T 1fg7_A 261 GIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNY---ILARFK--------ASSAVFKSLWDQGIILRDQNKQPS 329 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSE---EEEEET--------THHHHHHHHHHTTEECEECTTSTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeE---EEEECC--------CHHHHHHHHHHCCEEEEECCCCCC
Confidence 3 5566666778889999999874222 111111221 344542 567899999999998754 22 22
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
..+++||++. +++|+++++++|+++
T Consensus 330 ~~~~iRis~~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 330 LSGCLRITVG---TREESQRVIDALRAE 354 (356)
T ss_dssp CTTEEEEECC---CHHHHHHHHHHHHTC
T ss_pred CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 3578999986 689999999998754
No 169
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.75 E-value=8.7e-17 Score=183.72 Aligned_cols=274 Identities=12% Similarity=0.092 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHh-ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK 177 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~-~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~ 177 (946)
+...++++.+|+++|.+ .++.+ .+|+.+..+++.++ +.. +||+|+++...|+++...++. .|++++.++.+
T Consensus 91 ~~~~~l~~~la~~~~~~-~~i~~-~sG~~a~~~~~~~l~~~~--~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~v~~~ 162 (401)
T 2bwn_A 91 AYHRRLEAEIAGLHQKE-AALVF-SSAYNANDATLSTLRVLF--PGLIIYSDSLNHASMIEGIKR----NAGPKRIFRHN 162 (401)
T ss_dssp HHHHHHHHHHHHHTTCS-EEEEE-SCHHHHHHHHHHHHHHHS--TTCEEEEETTCCHHHHHHHHH----SCCCEEEECTT
T ss_pred HHHHHHHHHHHHHhCCC-cEEEE-CCcHHHHHHHHHHHhcCC--CCCEEEECchhhHHHHHHHHH----cCCeEEEEcCC
Confidence 45667889999999974 44444 55555555554432 222 789999999999999988753 57888888764
Q ss_pred ---cccc-cC----CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC-----Cc----cceE
Q 002263 178 ---DIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADI 239 (946)
Q Consensus 178 ---~l~~-i~----~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~-----~~----GaDi 239 (946)
++++ +. +++++|++.+| |.+|.+.|+++|.++||++|+++++| +..+.+...+.+ .+ +.|+
T Consensus 163 d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D-ea~~~g~~~~~g~~~~~~~~~~~~~~i 241 (401)
T 2bwn_A 163 DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYID-EVHAVGMYGPRGAGVAERDGLMHRIDI 241 (401)
T ss_dssp CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEE-CTTTTTTSSTTSCCHHHHHTCGGGCSE
T ss_pred CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEe-ccccccccCCCCceeeeccCccccCcE
Confidence 4554 43 57899999988 67999999999999999999999994 344433332211 12 3589
Q ss_pred EEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 240 VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 240 ~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
+++|. |.|+. || |++..++++.+.+.. .....+...+|++ ....++.
T Consensus 242 ~~~s~sK~~~~------~G-G~~~~~~~~~~~l~~---------------------~~~~~~~~~~~~~----~~~~a~~ 289 (401)
T 2bwn_A 242 FNGTLAKAYGV------FG-GYIAASARMVDAVRS---------------------YAPGFIFSTSLPP----AIAAGAQ 289 (401)
T ss_dssp EEEESSSTTCS------CC-EEEEECHHHHHHHHH---------------------HCHHHHTSBCCCH----HHHHHHH
T ss_pred EEeechhhccC------CC-CEEecCHHHHHHHHH---------------------hCcCceecCCCCH----HHHHHHH
Confidence 88887 88753 33 788888776654310 0001111222322 1222333
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHH-HcCCeeeeec---
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVVD--- 391 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~-~~GI~~~~~~--- 391 (946)
+++ .++...|++++.++..++.+++.+.|+++| +++.... ...+.+.++. +.++.+.|. ++||.++...
T Consensus 290 ~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~ 365 (401)
T 2bwn_A 290 ASI--AFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHG-SHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPT 365 (401)
T ss_dssp HHH--HHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCS-SSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTT
T ss_pred HHH--HHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-CCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCC
Confidence 343 566666788999999999999999999886 8776432 2346666653 678999996 7899886532
Q ss_pred -C---CeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 -S---NTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 -~---~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ +.+|+|++.++|++|+++++++|..
T Consensus 366 ~~~~~~~iRis~~~~~t~~~i~~~~~~l~~ 395 (401)
T 2bwn_A 366 VPRGTERLRFTPSPVHDLKQIDGLVHAMDL 395 (401)
T ss_dssp SCTTCCEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEeeCCCCHHHHHHHHHHHHH
Confidence 1 4799999999999999999999963
No 170
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.75 E-value=2e-17 Score=189.21 Aligned_cols=298 Identities=16% Similarity=0.102 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC-
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~- 599 (946)
...++++.+++++|.+. .+..++|+++...+ ++.+ +..++++|+++...|+.....+...|++++.+++++
T Consensus 64 ~~~~l~~~la~~~~~~~-~v~~~~Gt~a~~~~---l~~~----~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 135 (399)
T 2oga_A 64 ELEGFEAEFAAYCETDH-AVGVNSGMDALQLA---LRGL----GIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHED 135 (399)
T ss_dssp HHHHHHHHHHHHTTSSE-EEEESCHHHHHHHH---HHHT----TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSS
T ss_pred hHHHHHHHHHHHHCCCe-EEEecCHHHHHHHH---HHHh----CCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCC
Confidence 35678899999999874 35566776655433 3332 012568899999888877777889999999999976
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC--CCEEEe
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG--ADVCHL 677 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G--aDi~~~ 677 (946)
++.+|+++|+++++ +++++|++++ .+|.+. ++++|.++|+++|+++++|+++..... + ....++ .|++++
T Consensus 136 ~~~~d~~~l~~~i~---~~~~~v~~~n--~tG~~~-~l~~i~~l~~~~~~~li~Dea~~~g~~-~-~~~~~~~~~di~~~ 207 (399)
T 2oga_A 136 HPTLDPLLVEKAIT---PRTRALLPVH--LYGHPA-DMDALRELADRHGLHIVEDAAQAHGAR-Y-RGRRIGAGSSVAAF 207 (399)
T ss_dssp SSSBCHHHHHHHCC---TTEEEECCBC--GGGCCC-CHHHHHHHHHHHTCEECEECTTCTTCE-E-TTEETTCTTCEEEE
T ss_pred CCCcCHHHHHHhcC---CCCeEEEEeC--CcCCcc-CHHHHHHHHHHcCCEEEEECcccccCc-c-CCeecccccCEEEE
Confidence 47899999999996 6888888664 479887 799999999999999999998743211 1 111234 699999
Q ss_pred CCC--cccccCCCCCCCcceeEEEe-cccCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 678 NLH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 678 s~h--K~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
|+| |+|+.| | .+|+++++ +++.+.+.. ...+....+ .......... .+...++++.+.+.
T Consensus 208 S~~~sK~~~~~----G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~-----~~~~~g~~~~--~~~~~~a~~~~~l~---- 271 (399)
T 2oga_A 208 SFYPGKNLGCF----G-DGGAVVTGDPELAERLRMLRNYGSRQKY-----SHETKGTNSR--LDEMQAAVLRIRLA---- 271 (399)
T ss_dssp ECCTTSSSCCS----S-CCEEEEESCHHHHHHHHHHHBTTCSSTT-----CCCSCCCBCC--CCHHHHHHHHHHHH----
T ss_pred eCCCCccCCcC----C-ceEEEEeCCHHHHHHHHHHHhcCccccc-----cccccccCCC--cCHHHHHHHHHHHH----
Confidence 985 988521 3 46777775 555433210 000100000 0000000000 01222222222222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCC-ceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPV 829 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~--~~v~~~~~~~-~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~ 829 (946)
.+.+..++...+++++.+.|++. +.+......+ +.+..+.+. ..+..++.++|.++||.+.... .|.
T Consensus 272 -~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~L~~~gI~v~~~~~~~~ 342 (399)
T 2oga_A 272 -HLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVR--------TERRDELRSHLDARGIDTLTHYPVPV 342 (399)
T ss_dssp -THHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEE--------CSSHHHHHHHHHHTTBCCBCSCSSCG
T ss_pred -HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEE--------CCCHHHHHHHHHHCCCceecCCCCcc
Confidence 23344555567788999999874 3332111111 111112222 1367899999999999875421 110
Q ss_pred -----------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 830 -----------------------PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 830 -----------------------~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+.+||++...+|++|+++++++|++++++
T Consensus 343 ~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 343 HLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp GGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred ccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 157999999999999999999999988764
No 171
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.75 E-value=1.5e-16 Score=181.81 Aligned_cols=274 Identities=16% Similarity=0.161 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+|+++|.+ ++.++++||+++++++.++ .. +||+|+++...|+++...+....+..|++++.++.+
T Consensus 67 ~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~-~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 141 (392)
T 3qhx_A 67 TRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAM-LR--PGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADL 141 (392)
T ss_dssp HHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHH-CC--TTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCH
T ss_pred HHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH-hC--CCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCH
Confidence 4567889999999987 4778899998888777655 23 789999999999999988877677789999999875
Q ss_pred -cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 178 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 178 -~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+....+.++|+|+++.|. |.++++
T Consensus 142 ~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D-~~~~~~~~~~~~~~~~di~~~S~sK~lg~~--- 217 (392)
T 3qhx_A 142 DAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVD-NTFASPALQQPLSLGADVVLHSTTKYIGGH--- 217 (392)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEE-CTTTCTTTCCGGGGTCSEEEEETTTTTTCS---
T ss_pred HHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEE-CCCcccccCChHHhCCcEEEEcCccccCCC---
Confidence 4555 7889999999998 67999999999999999999999995 34455555566789999999998 766422
Q ss_pred CCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 254 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 254 GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
|++-+|++++++ ++.+.+.. .++..+. .. .++.+.. ...+-+.+.
T Consensus 218 g~~~~G~v~~~~~~~~~~l~~-------------------------~~~~~g~--~~--~~~~~~~-----~~~~l~~l~ 263 (392)
T 3qhx_A 218 SDVVGGALVTNDEELDQSFAF-------------------------LQNGAGA--VP--GPFDAYL-----TMRGLKTLV 263 (392)
T ss_dssp SCCCCEEEEESCHHHHHHHHH-------------------------HHHHHCC--CC--CHHHHHH-----HHHHHTTHH
T ss_pred CCceEEEEEECcHHHHHHHHH-------------------------HHHhcCC--CC--CHHHHHH-----HHhhhhHHH
Confidence 223368888874 55544310 0010010 00 1111111 111122345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEc-CC-----C-----------CcCeEEEecCC----HHHHHHHHHHcCCeee---
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTVEVQ-GL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEMNLR--- 388 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~~~~-~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~~GI~~~--- 388 (946)
...++..+++.++++.|++...+.-+ .+ + ....+.|.+++ +..+.+.|...|+.++
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~ 343 (392)
T 3qhx_A 264 LRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGS 343 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCC
Confidence 55677778889999999887435332 11 1 02246676654 4556666655555331
Q ss_pred -------e--------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 -------V--------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 -------~--------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. +.++.||+|++..+++++|+++.++|.
T Consensus 344 ~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 344 VESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp SSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred CCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 0 125679999999999999999998873
No 172
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.75 E-value=6.4e-17 Score=179.82 Aligned_cols=280 Identities=15% Similarity=0.086 Sum_probs=176.1
Q ss_pred HHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH----HHcCCEEEEEcCCC
Q 002263 524 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSVGTDA 599 (946)
Q Consensus 524 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a----~~~G~~vv~v~~~~ 599 (946)
++++.+++++|.+ ..+..++|+++...+ ++.+. .++++|+++...|+.+...+ ...|++++.++.
T Consensus 2 ~l~~~la~~~g~~-~~i~~~sG~~a~~~~---~~~~~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE-ACAATASGMGAIAAS---VWTFL-----KAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-- 70 (331)
T ss_dssp HHHHHHHHHHTCS-EEEEESSHHHHHHHH---HHHHC-----CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT--
T ss_pred hHHHHHHHHhCCC-eEEEeCChHHHHHHH---HHHhc-----CCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC--
Confidence 5788999999988 445667776555433 33321 24678999988777655443 458999999986
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHH-cCCEEEEecccccccccccCCCccCCCEEEe
Q 002263 600 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSPGYIGADVCHL 677 (946)
Q Consensus 600 ~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~-~g~ll~vD~a~~~a~~gl~~pg~~GaDi~~~ 677 (946)
.|+++|+++++ +++++|++++|+ .+|.+. |+++|+++|++ +|+++++|+++.... +..+.++|.|+++.
T Consensus 71 ---~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~~~~i~~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~d~~~~ 141 (331)
T 1pff_A 71 ---AVPGNIEKHLK---PNTRIVYFETPANPTLKVI-DIEDAVKQARKQKDILVIVDNTFASPI--LTNPLDLGVDIVVH 141 (331)
T ss_dssp ---TSTTHHHHTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHTTSSSCEEEEECTTTHHH--HCCGGGGTCSEEEE
T ss_pred ---CCHHHHHHhhc---CCCeEEEEECCCCCcCccc-CHHHHHHHHhhhcCCEEEEECCCcccc--cCChhhcCCcEEEE
Confidence 48899999886 789999999994 689998 79999999999 999999999875322 22344678999999
Q ss_pred CCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhH
Q 002263 678 NLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 756 (946)
Q Consensus 678 s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl 756 (946)
++||+|+.| |++.+|++++++ ++.+.+..... ...+ .+.+ ......+...+.. +
T Consensus 142 s~~K~~~~~---~~r~~G~~~~~~~~~~~~l~~~~~------------~~~~-~~~~----~~~~~~~~~~l~~-----~ 196 (331)
T 1pff_A 142 SATKYINGH---TDVVAGLVCSRADIIAKVKSQGIK------------DITG-AIIS----PHDAWLITRGTLT-----L 196 (331)
T ss_dssp ETTTTTSSS---SSCCCEEEEECHHHHHHHHHTCCC------------CCCC-CCCC----HHHHHHHHHHHHH-----H
T ss_pred ECccccCCC---CCceEEEEEeCcHHHHHHHHHHHH------------hhcC-CCCC----HHHHHHHHcCcch-----H
Confidence 999998532 222278999887 66544321100 0000 0111 1111111112221 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCeeeccCC---C---------ceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 757 TEASKIAILNANYMAKRLEKH---YPILFRGVN---G---------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~---~~v~~~~~~---~---------~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
....+....++..+.+.|++. ....+++-. + ...+.+.+.+. +..++.+.|.++||.
T Consensus 197 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gI~ 268 (331)
T 1pff_A 197 DMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEKAKKVLDNCHVV 268 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHHHHHHHHhCCCc
Confidence 222233334555555555432 111111100 0 01122344432 467888999999996
Q ss_pred cCCCC---------C-----------------CC-CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 822 GPTMS---------W-----------------PV-PGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 822 ~~~~~---------~-----------------p~-~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+...+ + .+ .+.+|+++...+|++++++++++|+++
T Consensus 269 ~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 269 SLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp EECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred eeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 42221 0 01 479999999999999999999998754
No 173
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.75 E-value=6.2e-17 Score=183.28 Aligned_cols=297 Identities=11% Similarity=0.081 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHhhC--CCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 520 EMFNNLGEWLCTITG--FDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 520 ~~~~el~~~la~l~G--~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
+...++++++++.+| .+... +.+++|+++...+ ++.+. .++++|+++...|..+...+...|.+++.++
T Consensus 63 ~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~---~~~l~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~ 134 (383)
T 3kax_A 63 NIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTS---IQAFT-----KENESVLVQPPIYPPFFEMVTTNNRQLCVSP 134 (383)
T ss_dssp THHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH---HHHHC-----CTTCEEEECSSCCHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH---HHHhC-----CCCCEEEEcCCCcHHHHHHHHHcCCEEEecc
Confidence 456678899999988 44433 4455555555333 33321 2468999999887777777889999999999
Q ss_pred CCCCC---CCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccccc-cccc--cCC
Q 002263 597 TDAKG---NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGL--TSP 667 (946)
Q Consensus 597 ~~~~g---~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl--~~p 667 (946)
+++++ .+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++... ..+- ...
T Consensus 135 ~~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~ 211 (383)
T 3kax_A 135 LQKQNDTYAIDFEHLEKQFQ---QGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPF 211 (383)
T ss_dssp CEEETTEEECCHHHHHHHHT---TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred ceecCCcEEEcHHHHHHHhC---cCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeH
Confidence 86533 489999999995 789999999994 6898852 4778888899999999999986421 1111 111
Q ss_pred Ccc-----CCCEEEeCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 668 GYI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 668 g~~-----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
..+ +.++++.++||+|+. +|.++|++.+ ++++.+.+..... ...+. +. +....
T Consensus 212 ~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~-----------~~~~~--~~----~~~~~ 270 (383)
T 3kax_A 212 ASLSEELAARTITCMAPSKTFNI----AGLQASIIIIPNEKLRQAFTSIQY-----------RQGFH--GL----NIFAY 270 (383)
T ss_dssp GGSCHHHHTTEEEEECSHHHHTC----GGGCCEEEECCCHHHHHHHHHHHH-----------HTTCC--CC----CHHHH
T ss_pred hhcCccccCcEEEEEEChhhccC----cchhheEEEeCCHHHHHHHHHHHh-----------hcccC--CC----CHHHH
Confidence 111 344888899999953 3667899887 4555543321000 00000 11 12222
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
.++.+.+.. +.+.+.+..++...+++++.+.|++. ..+.+..+.+.++ ++++++. .+.+..++.++|. ++|
T Consensus 271 ~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~~~g 343 (383)
T 3kax_A 271 TAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFL--LWIDCSA----LNLSQDERTKLLEEKGK 343 (383)
T ss_dssp HHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSE--EEEECGG----GCCCHHHHHHHHHHTSC
T ss_pred HHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEE--EEEEccc----cCCCHHHHHHHHHhhCC
Confidence 222333322 34456667777778899999999873 2332222222221 3466652 2468899999998 689
Q ss_pred cccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 820 FHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 820 i~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
|.+.. ..|. ..+.+|++++ .++++++++++.|++++
T Consensus 344 i~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 344 IIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp EECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred EEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 98743 2222 3589999987 47899999999998764
No 174
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.75 E-value=3.5e-17 Score=185.09 Aligned_cols=293 Identities=9% Similarity=-0.032 Sum_probs=190.5
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++..++.+++.+.+|. +... +.+++|+++...+ ++.+. .+ +++++|+++...|..+...+...|.++
T Consensus 59 ~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~---~~~~~-~~--~~gd~vl~~~p~~~~~~~~~~~~g~~~ 132 (376)
T 3ezs_A 59 AFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNF---PSFVL-FD--YQNPTIAYPNPFYQIYEGAAKFIKAKS 132 (376)
T ss_dssp TCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHH---HHHHT-TT--CSSCEEEEEESCCTHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHH---HHHHc-CC--CCCCEEEEecCCcHhHHHHHHHcCCEE
Confidence 46667777788888888887 3333 4455566555333 33331 11 116899999888877777788999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccccc-cccccCC-
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGLTSP- 667 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl~~p- 667 (946)
+.++.++++.+++ +|++++. +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++... ..+-..+
T Consensus 133 ~~~~~~~~~~~~~-~l~~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 208 (376)
T 3ezs_A 133 LLMPLTKENDFTP-SLNEKEL---QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSL 208 (376)
T ss_dssp EEEECCGGGTSCC-CCCHHHH---HHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCH
T ss_pred EEcccCCCCCcch-hHHhhhc---cCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCH
Confidence 9999987655666 7778886 578899999995 6888751 4888888999999999999986421 1110001
Q ss_pred C---------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 668 G---------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 668 g---------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
. ..+.++++.++||+|+. +|.++|++.+++++.+.+.... .. ...+. +.
T Consensus 209 ~~~~~~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~------------~~--~~~~~----~~ 266 (376)
T 3ezs_A 209 LEACMLAGNEAFKNVLVIHSLSKRSSA----PGLRSGFIAGDSRLLEKYKAFR------------AY--LGYTS----AN 266 (376)
T ss_dssp HHHHHHTTCTTCTTEEEEEESTTTTTC----GGGCCEEEEECHHHHHHHHHHH------------TT--TCCCC----CH
T ss_pred HHccccccccccCcEEEEecchhccCC----ccceeEEEeeCHHHHHHHHHHH------------hh--hcCCC----Ch
Confidence 0 34667888999999853 4678899998877665432100 00 01111 12
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD- 817 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~- 817 (946)
....++.+.+.. .+.+.+..++...+.+++.+.|+ .+. .+ .+..+ +.++++ +..++.++|.+
T Consensus 267 ~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~-~~~--~~--~~~~~--~~~~~~--------~~~~~~~~l~~~ 329 (376)
T 3ezs_A 267 AIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK-NTL--IY--PYSFY--VYLPVQ--------NGENFAKTLYQN 329 (376)
T ss_dssp HHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST-TCC--CC--SBSSE--EEEECS--------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc-CCC--CC--CcceE--EEEECC--------CHHHHHHHHHHh
Confidence 222222333332 33456666677778888888887 322 11 11121 345542 57889999997
Q ss_pred CCcccCCC-CC----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGPTM-SW----PVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 818 ~Gi~~~~~-~~----p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+||.+... .| ...+.+||+++. ++++++++++.|.+++++
T Consensus 330 ~gi~v~~g~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 330 EGIITLPALYLGRNRIGADYVRLALVY--DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp HCCBCEEGGGGCSTTTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC
T ss_pred CCEEEeCcHHhCCCCCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 89986421 12 135899999873 899999999999987643
No 175
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.75 E-value=2.9e-17 Score=201.80 Aligned_cols=280 Identities=10% Similarity=0.031 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 176 (946)
..+.++|+.+++++|.+. .+.+++|+|++..++++++. . +||+|++++.+|+++...++. .|+++++++.
T Consensus 205 g~v~~~ee~la~l~G~d~-~i~~~~Gtt~a~~~~i~al~-~--~GD~Vlv~~~~h~s~~~~~~~----~G~~~v~v~~~~ 276 (755)
T 2vyc_A 205 GAFGESEKYAARVFGADR-SWSVVVGTSGSNRTIMQACM-T--DNDVVVVDRNCHKSIEQGLML----TGAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHHHHHHTCSE-EEEESSHHHHHHHHHHHHHC-C--TTCEEEEESSCCHHHHHHHHH----HCCEEEEECCCB
T ss_pred cHHHHHHHHHHHHhCCCc-eEEECCcHHHHHHHHHHHhc-C--CCCEEEECCCchHHHHHHHHH----cCCEEEEEeCCC
Confidence 457788999999999975 24456666777777777663 3 899999999999999988753 3777777643
Q ss_pred ----------------ccccc-cC--CCEe--------EEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccC-
Q 002263 177 ----------------KDIDY-KS--GDVC--------GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI- 228 (946)
Q Consensus 177 ----------------~~l~~-i~--~~t~--------~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~- 228 (946)
+++++ +. ++++ +|++++||++|.+.|+++|+++||++|++++|+. .++...
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDe-A~~~~~~ 355 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDE-AWYGYAR 355 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEEC-TTCTTGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEEC-cCchhcc
Confidence 33444 42 3454 8899999999999999999999999999999943 222111
Q ss_pred C------CCCCCcc--ceE------EEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecc
Q 002263 229 L------KPPGELG--ADI------VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ 293 (946)
Q Consensus 229 l------~~~~~~G--aDi------~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~ 293 (946)
. ..+. +| +|+ +++|+ |++++| +++|+++++++. +.+ + ...+
T Consensus 356 ~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~-----~~g~~i~~~~~~-~~i---------~---~~~~----- 411 (755)
T 2vyc_A 356 FNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNAL-----SQASYIHVREGR-GAI---------N---FSRF----- 411 (755)
T ss_dssp GCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCC-----TTCEEEEEECCB-TCC---------C---HHHH-----
T ss_pred cCcccCCcchh-cCCcCCccCCCeEEEECccccccCc-----CCeeeeeecCcc-ccc---------C---HHHH-----
Confidence 1 1122 67 887 88888 665433 246888887651 011 0 0000
Q ss_pred cccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC---------EEEcCCC---
Q 002263 294 TREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT---------VEVQGLP--- 361 (946)
Q Consensus 294 tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~---------~~~~~~~--- 361 (946)
+....+.+.+|+|+ ..+.++.++. .++..+|.+++.++..+++++++++|+++++ ++++.+.
T Consensus 412 -~~~~~~~~s~sp~~---~~iaal~aA~--~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~ 485 (755)
T 2vyc_A 412 -NQAYMMHATTSPLY---AICASNDVAV--SMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVT 485 (755)
T ss_dssp -HHHHHHTSCSSCCH---HHHHHHHHHH--HHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEE
T ss_pred -HHHHHHhCCCCHHH---HHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhcc
Confidence 00111233455554 3444554444 5566666678889999999999999998765 5555321
Q ss_pred --------------------------------------------CcC--eEEEecC-----------C--HHHHHHHHHH
Q 002263 362 --------------------------------------------FFD--TVKVKCA-----------D--AHAIASAAYK 382 (946)
Q Consensus 362 --------------------------------------------~~~--~~~i~~~-----------~--~~~v~~~L~~ 382 (946)
.++ .++|.++ + +.++.+.|++
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~ 565 (755)
T 2vyc_A 486 DPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGR 565 (755)
T ss_dssp CTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHT
T ss_pred ccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHH
Confidence 012 3566655 2 4789999999
Q ss_pred cCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 383 IEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 383 ~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+||.++....+.+|++++..+|++++++++++|..
T Consensus 566 ~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~ 600 (755)
T 2vyc_A 566 HGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCS 600 (755)
T ss_dssp TTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHH
T ss_pred CCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999887889999999999999999999999973
No 176
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.74 E-value=6.9e-17 Score=181.51 Aligned_cols=282 Identities=12% Similarity=0.099 Sum_probs=189.6
Q ss_pred HHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++++++++|.+... +.+++|+++.. ++++. - ++|+++...|..+...+...|.+++.++.++++
T Consensus 64 ~~l~~~la~~~~~~~~~i~~~~g~t~al~---~~~~~--------~-d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 131 (361)
T 3ftb_A 64 RRLNKSIENYLKLKDIGIVLGNGASEIIE---LSISL--------F-EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM 131 (361)
T ss_dssp HHHHHHHHHHHTCCSCEEEEESSHHHHHH---HHHTT--------C-SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS
T ss_pred HHHHHHHHHHhCCCcceEEEcCCHHHHHH---HHHHH--------c-CcEEEecCChHHHHHHHHHcCCeEEEeecCccc
Confidence 46788999999986543 44455554443 33332 1 689998888777777788999999999998888
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccccc-ccC----CCccCCC
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVG-LTS----PGYIGAD 673 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~~g-l~~----pg~~GaD 673 (946)
..|+++|+++++ + +++|++++| |.+|.+.+ ++++|+++|+++|+++++|+++...... ... .+..+.+
T Consensus 132 ~~~~~~l~~~l~---~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 207 (361)
T 3ftb_A 132 CIDYEDIISKID---D-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCL 207 (361)
T ss_dssp CCCHHHHHHHTT---T-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSE
T ss_pred CCCHHHHHHhcc---C-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCE
Confidence 899999999996 4 889999999 46888752 4888999999999999999986421111 011 1122344
Q ss_pred EEEeCCCcccccCCCCCCCcceeEE-EecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIG-VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~-~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
+++.+++|+|+. +|.++|++. .++++.+.+... + . ..+. +.....++.+.+. .
T Consensus 208 i~~~s~sK~~~~----~G~r~g~~~~~~~~~~~~~~~~------------~--~--~~~~----~~~~~~~~~~~l~--~ 261 (361)
T 3ftb_A 208 FIIRAMTKFFAM----PGIRFGYGITNNKEIAAKIKAK------------Q--N--PWNI----NCFAEMAAINCLK--D 261 (361)
T ss_dssp EEEEESSSTTSC----GGGCCEEEEESCHHHHHHHHTT------------S--C--TTCS----CHHHHHHHHHTSS--C
T ss_pred EEEeeChhhcCC----CCcceeEEEeCCHHHHHHHHhh------------C--C--CCCC----CHHHHHHHHHHhc--C
Confidence 777889999853 356788887 566655443211 0 0 1111 1222222333333 2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhccCCee-eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC--
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP-- 828 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~~~v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p-- 828 (946)
.+.+.+..++...+++++.+.|++...+. ...+.+.+ +.++++ +.+..++.++|.++|+.+.. ..|+
T Consensus 262 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~l~~~l~~~gi~v~~g~~~~~~ 332 (361)
T 3ftb_A 262 TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANF---VLCRLE------NISGEKLYDSLLKEDIVIRRCCNFIGL 332 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSE---EEEEES------SSCHHHHHHHHHTTTEECEECTTSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeE---EEEEcC------CCCHHHHHHHHHHCCeEEeeCccCCCC
Confidence 45667777777888999999998753332 22222322 345554 24788999999999998643 2232
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
..+.+|+++. +.+|+|+++++|+++.+
T Consensus 333 ~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 333 DDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp CTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 2578999985 78899999999988764
No 177
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.74 E-value=3.2e-17 Score=185.52 Aligned_cols=294 Identities=13% Similarity=0.111 Sum_probs=190.3
Q ss_pred HHHHHHHHHhh-CCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 523 NNLGEWLCTIT-GFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 523 ~el~~~la~l~-G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.++++.+++++ +.+... +.+++|+++...++ +.+. +++++|+++...|..+...+...|.+++.++++.+
T Consensus 66 ~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~---~~l~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 137 (375)
T 3op7_A 66 PAFKKSVSQLYTGVKPEQILQTNGATGANLLVL---YSLI-----EPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEE 137 (375)
T ss_dssp HHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHH---HHHC-----CTTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGG
T ss_pred HHHHHHHHHHhccCChhhEEEcCChHHHHHHHH---HHhc-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEEecccc
Confidence 36778888877 345433 44555665554333 3321 25689999988887777778899999999998643
Q ss_pred --CCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEeccccccc-ccccCC-CccCC
Q 002263 601 --GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VGLTSP-GYIGA 672 (946)
Q Consensus 601 --g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~~p-g~~Ga 672 (946)
+.+|+++|+++++ +++++|++++| |.+|.+. + +++|+++|++||+++++|+++.... .++... ...+.
T Consensus 138 ~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~-~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 213 (375)
T 3op7_A 138 NGWLPDLEKLRQLIR---PTTKMICINNANNPTGAVM-DRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDK 213 (375)
T ss_dssp GTTEECHHHHHHHCC---TTCCEEEEESSCTTTCCCC-CHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTT
T ss_pred CCCCCCHHHHHHhhc---cCCeEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCC
Confidence 4589999999996 78999999999 5689887 6 9999999999999999999864211 111110 12345
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
++++.+++|+|+. +|.++|++.+++++.+.+.... .....+++ .....++.+.+.. .
T Consensus 214 ~i~~~s~sK~~~~----~G~r~G~v~~~~~l~~~~~~~~--------------~~~~~~~~----~~~~~~~~~~l~~-~ 270 (375)
T 3op7_A 214 GIAVNSLSKTYSL----PGIRIGWVAANHQVTDILRDYR--------------DYTMICAG----VFDDLVAQLALAH-Y 270 (375)
T ss_dssp EEEEEESSSSSSC----GGGCCEEEECCHHHHHHHTTTG--------------GGTTSCCC----HHHHHHHHHHHHT-H
T ss_pred EEEEeEChhhcCC----cccceEEEEeCHHHHHHHHHHH--------------hhhccCCC----cHHHHHHHHHHhc-c
Confidence 6778889999853 3567899998877665543110 00111211 2222223333332 2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH-HHCCcccCC-CCCCCC
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHGPT-MSWPVP 830 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L-~~~Gi~~~~-~~~p~~ 830 (946)
.+.+.+..++...+++++.+.|++...+.+..+.+... +.+.++ .+.+..++.++| .++||.+.. ..|..+
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 343 (375)
T 3op7_A 271 QEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVST--SFVKIA-----VDMPMEDFCLQLLQEHGVLLVPGNRFERD 343 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSC--EEEEEC-----CSSCHHHHHHHHHHHHCEECEEGGGGTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEE--EeEEcC-----CCCCHHHHHHHHHHhCCEEEeChhhhCCC
Confidence 33455555566678889999988742332212222221 233433 145778899888 488998642 223336
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 831 GTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 831 ~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+.+|++++. +.++++++++.|.++++++
T Consensus 344 ~~iRi~~~~--~~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 344 GYVRLGFAC--EQETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp TEEEECCCS--CHHHHHHHHHHHHHHHGGG
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHHHH
Confidence 899999864 4589999999999887654
No 178
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.74 E-value=5.3e-17 Score=187.86 Aligned_cols=309 Identities=16% Similarity=0.142 Sum_probs=187.8
Q ss_pred ccHHHHHHHHHHHHHHhhC----CCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH-HcC
Q 002263 516 QGYQEMFNNLGEWLCTITG----FDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 589 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G----~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~-~~G 589 (946)
+|..++...+.+++.+..| .+... +..++|++++..++ +.+. .++++|+++...|+.+...+. ..|
T Consensus 86 ~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~---~~l~-----~~gd~vl~~~p~~~~~~~~~~~~~g 157 (435)
T 3piu_A 86 HGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFI---FCLA-----DPGEAVLIPTPYYPGFDRDLKWRTG 157 (435)
T ss_dssp TCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHH---HHHC-----CTTCEEEEEESCCTTHHHHTTTTTC
T ss_pred CCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHH---HHhc-----CCCCeEEECCCccccHHHHHHHhcC
Confidence 3544555445555544433 33333 44555555554443 3321 246889999998888777766 789
Q ss_pred CEEEEEcCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEecccccc-
Q 002263 590 MKIVSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA- 660 (946)
Q Consensus 590 ~~vv~v~~~~~--g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a- 660 (946)
.+++.++++++ ..+|+++|+++++++ ..++++|++++|+ .+|.+- +++++|+++|++||+++++|+++...
T Consensus 158 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 237 (435)
T 3piu_A 158 VEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTA 237 (435)
T ss_dssp CEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGC
T ss_pred CEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccc
Confidence 99999999764 468999999999742 2489999999995 688874 24799999999999999999987421
Q ss_pred cccc--cCCC----ccCCC---------EEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCC
Q 002263 661 QVGL--TSPG----YIGAD---------VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKS 724 (946)
Q Consensus 661 ~~gl--~~pg----~~GaD---------i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~ 724 (946)
+++- .... +.++| +++.++||+|+. +|.++|+++++ +.+...+... +
T Consensus 238 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~------------~- 300 (435)
T 3piu_A 238 FSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGL----PGFRVGAIYSNDDMVVAAATKM------------S- 300 (435)
T ss_dssp CSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCC----GGGCEEEEEESCHHHHHHHHHH------------G-
T ss_pred cCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCC----CceeEEEEEeCCHHHHHHHHHH------------h-
Confidence 1111 1100 11222 778889999853 46778999885 3443322100 0
Q ss_pred CCCCCcccCccchhhHHHHHHHHHHHHc--HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEeccccc
Q 002263 725 QPLGTIAAAPWGSALILPISYTYIAMMG--SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLK 801 (946)
Q Consensus 725 ~~~~~i~~~~~g~~~~~~~a~a~l~~lG--~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~ 801 (946)
.+... +.....++.+++.... .+.+.+..++...+.+++.+.|++. +.+. .+.+..+ +.++++...
T Consensus 301 -~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~g~~--~~~~l~~~~ 369 (435)
T 3piu_A 301 -SFGLV------SSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCL--NGNAGLF--CWVDMRHLL 369 (435)
T ss_dssp -GGSCC------CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEC--CCCSSSE--EEEECGGGS
T ss_pred -hcCCC------CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--CCCeeEE--EEEEccccc
Confidence 00011 1111112222332211 2344556666777888999999875 3332 2222121 445654211
Q ss_pred ccCC-CCHHHHHHHHHHC-CcccCC-CCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 802 NTAG-IEPEDVAKRLMDY-GFHGPT-MSW--PVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 802 ~~~g-~~~~~i~~~L~~~-Gi~~~~-~~~--p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.... .+..++.++|.++ ||.+.. ..| ..++++||+++.. ++++|+++++.|.+++++++
T Consensus 370 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 370 RSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp SSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHHh
Confidence 0000 0356888998876 998642 222 1358899999765 89999999999999987764
No 179
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.74 E-value=4.6e-17 Score=185.51 Aligned_cols=299 Identities=12% Similarity=0.061 Sum_probs=192.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---cc-c-ccCCchHHHHHHHHHHHHHHHHhcC-CCCCCEEEEcCCCCCCCHHHHHHcC
Q 002263 516 QGYQEMFNNLGEWLCTITGFD---SF-S-LQPNAGAAGEYAGLMVIRAYHKARG-DHHRNVCIIPVSAHGTNPATAAMCG 589 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~---~~-~-l~~~sGa~ge~a~l~a~r~y~~~~G-~~~~~~Ili~~saHg~~~~~a~~~G 589 (946)
+|..++..++.+++.+.+|.+ .. . +.+++|+++... +++.+. .+| ...+++|+++...|..+...+...|
T Consensus 66 ~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~---~~~~~~-~~g~~~~~d~vl~~~p~~~~~~~~~~~~g 141 (396)
T 3jtx_A 66 AGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFS---FVQTVL-NPVSDGIKPAIVSPNPFYQIYEGATLLGG 141 (396)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHH---HHHHHC-CC---CCCCEEEEEESCCHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHH---HHHHHh-CCCCccCCCEEEEcCCCcHhHHHHHHHcC
Confidence 466677778888888888853 33 4 344455545433 333331 221 1113789998887766666788999
Q ss_pred CEEEEEcCCCCC-CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEecccccc-cccc
Q 002263 590 MKIVSVGTDAKG-NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL 664 (946)
Q Consensus 590 ~~vv~v~~~~~g-~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl 664 (946)
++++.++.+++| .+|+++|+++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|+++... ..+-
T Consensus 142 ~~~~~v~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 218 (396)
T 3jtx_A 142 GEIHFANCPAPSFNPDWRSISEEVW---KRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN 218 (396)
T ss_dssp CEEEEEECCTTTCCCCGGGSCHHHH---HTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC
T ss_pred CEEEEeecCCCCCccCHHHHHHhhc---cCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 999999996655 689999999997 589999999994 689885 14666999999999999999986421 1110
Q ss_pred cCCC----------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 665 TSPG----------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 665 ~~pg----------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
.... +.+.++++.+++|+|+. +|.++|++..++++.+.+.... ... ..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~------------~~~--~~~~-- 278 (396)
T 3jtx_A 219 KPLGCLQAAAQLGRSRQKLLMFTSLSKRSNV----PGLRSGFVAGDAELLKNFLLYR------------TYH--GSAM-- 278 (396)
T ss_dssp CCCCHHHHHHHTTCCCTTEEEEEESTTTSSC----GGGCCEEEEECHHHHHHHHHHH------------HHH--TCCC--
T ss_pred CCchHHhhhhhcccccCcEEEEeccccccCC----cccceEEEEeCHHHHHHHHHHH------------hhc--ccCC--
Confidence 0111 24667888899998753 4677899988877665432100 000 0111
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 814 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~ 814 (946)
+.....++.+.+. ..+.+.+..++...+.+++.+.|++.+.+. .+.+..+ +.++++ +.+..++.++
T Consensus 279 --~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~~~~~~--~~~~~~------~~~~~~~~~~ 344 (396)
T 3jtx_A 279 --SIPVQRASIAAWD--DEQHVIDNRRLYQEKFERVIPILQQVFDVK--LPDASFY--IWLKVP------DGDDLAFARN 344 (396)
T ss_dssp --CHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHTTTSCCC--CCSSSSE--EEEECT------TSCHHHHHHH
T ss_pred --CHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--CCCeeEE--EEEECC------CCCHHHHHHH
Confidence 1111222223332 244566666777788889999998764432 1122221 445654 2467889999
Q ss_pred HH-HCCcccCCC-CC--------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 815 LM-DYGFHGPTM-SW--------PVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 815 L~-~~Gi~~~~~-~~--------p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
|. ++||.+... .| +..+.+||+++. ++++++++++.|.+++
T Consensus 345 l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 345 LWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVATCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred HHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 96 569986321 11 124799999875 8999999999998763
No 180
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.74 E-value=7.7e-17 Score=184.45 Aligned_cols=304 Identities=17% Similarity=0.114 Sum_probs=191.0
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|. +... +.+++|+++... +++.+. .++++|+++...|..+...+...|+++
T Consensus 75 ~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~---~~~~~~-----~~gd~vl~~~p~~~~~~~~~~~~g~~~ 146 (407)
T 2zc0_A 75 NGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDL---LGRVLI-----DPGDVVITENPSYINTLLAFEQLGAKI 146 (407)
T ss_dssp TCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHH---HHHHHC-----CTTCEEEEEESCCHHHHHHHHTTTCEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHH---HHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCEE
Confidence 45555555566666555584 3333 344444555433 334331 245789998887766666688899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHh---cCCCeEEEE-EeCC-CcccccccCHH---HHHHHHHHcCCEEEEeccccccc-cc
Q 002263 593 VSVGTDAKGNINIEELRKAAEA---NRDNLSTLM-VTYP-STHGVYEEGID---EICKIIHDNGGQVYMDGANMNAQ-VG 663 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~---~~~~t~~vv-vt~P-n~~G~~~~~i~---~I~~ia~~~g~ll~vD~a~~~a~-~g 663 (946)
+.+|.++++ +|+++|++++++ ...++++|+ +.+| |.+|.+. +++ +|+++|+++|+++++|+++.... .+
T Consensus 147 ~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 224 (407)
T 2zc0_A 147 EGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTM-SMERRKALLEIASKYDLLIIEDTAYNFMRYEG 224 (407)
T ss_dssp EEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBSSC
T ss_pred EEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 999987766 999999999972 124788874 6677 4689887 455 99999999999999999864211 11
Q ss_pred c--cCCCcc---CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 664 L--TSPGYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 664 l--~~pg~~---GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
- .....+ +.++++.+++|+|+ | |.++|++++++++.+.+.... .....+++ .
T Consensus 225 ~~~~~~~~~~~~~~~i~~~s~sK~~~-~----G~r~G~~~~~~~~~~~~~~~~--------------~~~~~~~~----~ 281 (407)
T 2zc0_A 225 GDIVPLKALDNEGRVIVAGTLSKVLG-T----GFRIGWIIAEGEILKKVLMQK--------------QPIDFCAP----A 281 (407)
T ss_dssp SSCCCGGGGCSSCCEEEEEESTTTTC-T----TSCCEEEECCHHHHHHHHHHH--------------TTTTSSSC----H
T ss_pred CCCCChhhcCCCCCEEEEcccccccC-C----CcceEEEecCHHHHHHHHHHH--------------HhhcCCCC----H
Confidence 1 111122 34567788899985 2 456899998876655432100 00011111 2
Q ss_pred hHHHHHHHHHHHHc-H-hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 739 LILPISYTYIAMMG-S-KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 739 ~~~~~a~a~l~~lG-~-eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
....++.+++.... . +.+.+..++...+++++.+.|++. ..+.+..+.+.. -+.++++ .+.+..++.++|
T Consensus 282 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~l~~~l 354 (407)
T 2zc0_A 282 ISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGM--FVMFFLP-----EGADGISFANEL 354 (407)
T ss_dssp HHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSS--EEEEECS-----TTCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcE--EEEEEcC-----CCCCHHHHHHHH
Confidence 22222333443211 2 345556666677888999999764 222221222222 2456664 246788999999
Q ss_pred HHC-CcccCCC-CCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 816 MDY-GFHGPTM-SWP----VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 816 ~~~-Gi~~~~~-~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.++ ||.+... .|. ..+++||+++.. |++|++++++.|+++++++
T Consensus 355 ~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 355 MEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp HHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHH
T ss_pred HHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 988 9986432 221 247899999876 8999999999999987764
No 181
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.74 E-value=5.3e-17 Score=184.66 Aligned_cols=306 Identities=13% Similarity=0.102 Sum_probs=188.5
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
..++++.+++++|.+. .+..++|+++.. ++++.+ +..++++|+++...|.++...+...|++++.++++++
T Consensus 40 ~~~l~~~la~~~~~~~-~i~~~sGt~al~---~~l~~l----~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 111 (388)
T 1b9h_A 40 VNSFEREFAAHHGAAH-ALAVTNGTHALE---LALQVM----GVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAAT 111 (388)
T ss_dssp HHHHHHHHHHHTTCSE-EEEESCHHHHHH---HHHHHT----TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHhCCCe-EEEeCCHHHHHH---HHHHHc----CCCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCCc
Confidence 4578899999999874 355566765543 334432 1135689999999888888888899999999999875
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccc-cCCCccC-CCEEEeC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIG-ADVCHLN 678 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl-~~pg~~G-aDi~~~s 678 (946)
+.+|+++|+++++ +++++|+.+ |.+|.+. ++++|+++|+++|+++|+|+++..+...- ...+.+| +++..++
T Consensus 112 ~~~d~~~l~~~i~---~~~~~v~~~--n~tG~~~-~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s 185 (388)
T 1b9h_A 112 YNLDPEAVAAAVT---PRTKVIMPV--HMAGLMA-DMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQ 185 (388)
T ss_dssp CCBCHHHHHHHCC---TTEEEECCB--CGGGCCC-CHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECC
T ss_pred CCCCHHHHHHhcC---cCceEEEEe--CCccCcC-CHHHHHHHHHHcCCEEEEecchhcCCccCCeecccccceEEEEcc
Confidence 7899999999996 688888733 4579998 89999999999999999999875322110 1223455 3444444
Q ss_pred CCcccccCCCCCCCcceeEEEecc-c--CCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVKKH-L--APFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~~~-l--~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
.||++ +|+.+|+++++++ + .+.+.. +..+.... .+..... ...++..-+... +++.+.. .+
T Consensus 186 ~~K~l------~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~g~~~~~~~~~---~a~~~~~--~~ 250 (388)
T 1b9h_A 186 NGKLM------TAGEGGAVVFPDGETEKYETAFLRHSCGRPRD--DRRYFHK--IAGSNMRLNEFS---ASVLRAQ--LA 250 (388)
T ss_dssp TTSSS------CSSSCEEEEECTTCHHHHHHHHHHTBTTCCTT--CSSCCCC--SCCCBCBCBHHH---HHHHHHH--HT
T ss_pred CCCcc------cCCCeEEEEECCHHHHHHHHHHHHHhCCCCcc--Cccceee--cccccCCcCHHH---HHHHHHH--HH
Confidence 55665 2346788888865 4 332210 00011000 0000000 001100001111 1222222 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccC-C---CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC-
Q 002263 755 GLTEASKIAILNANYMAKRLEKHYPILFRGV-N---GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV- 829 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~-~---~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~- 829 (946)
.+.+..++...+++++.+.|+++..+...++ . ....+.+.++++.. .+.+..++.++|.++||.+...+.|.
T Consensus 251 ~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~L~~~gI~v~~~~~~~~ 327 (388)
T 1b9h_A 251 RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGL---TEERRNALVDRLVEAGLPAFAAFRAIY 327 (388)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTC---CHHHHHHHHHHHHHTTCCEEECCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCc---CcccHHHHHHHHHHCCCCcccccCccc
Confidence 4555666666788999999987522222111 0 01123356666421 01246789999999999864322221
Q ss_pred -----------------------------CCEEEEEcCCCC-CHHHHHHHHHHHHHHHHH
Q 002263 830 -----------------------------PGTLMIEPTESE-SKEELDRYCDALISIREE 859 (946)
Q Consensus 830 -----------------------------~~~lri~~t~~~-t~~eid~~~~aL~~i~~e 859 (946)
.+.||+++...+ |++|||+++++|++++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 328 RTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp GSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 136999999888 999999999999988654
No 182
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.74 E-value=1.1e-16 Score=182.64 Aligned_cols=273 Identities=14% Similarity=0.106 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-
Q 002263 98 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 176 (946)
Q Consensus 98 l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~- 176 (946)
.+...++++.+|+++|.+ ...++.+||.+++.++.++. ++||+|+++...|+++...++ ..|++++.++.
T Consensus 89 ~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~~---~~gd~v~~~~~~~~~~~~~~~----~~g~~~~~~~~~ 159 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGME--DAILYSSCFDANGGLFETLL---GAEDAIISDALNHASIIDGVR----LCKAKRYRYANN 159 (401)
T ss_dssp BHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHTTHHHHC---CTTCEEEEETTCCHHHHHHHH----TSCSEEEEECTT
T ss_pred cHHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHc---CCCCEEEEcchhHHHHHHHHH----HcCCceEEECCC
Confidence 455678889999999987 34566777876666555442 378999999999998877643 46888888764
Q ss_pred --ccccc-cCC------CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC--------C-CCccc
Q 002263 177 --KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP--------P-GELGA 237 (946)
Q Consensus 177 --~~l~~-i~~------~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~--------~-~~~Ga 237 (946)
+++++ +.+ ++++|++.+| |.+|.+.|+++|.++|+++|+++++|. ..+.+...+ . -..++
T Consensus 160 d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De-~~~~g~~~~~g~~~~~~~~~~~~~ 238 (401)
T 1fc4_A 160 DMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDD-SHAVGFVGENGRGSHEYCDVMGRV 238 (401)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEEC-TTTTTTSSTTSCCHHHHTTCTTCC
T ss_pred CHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEEC-cccccccCCCCCccHHHcCCCcCC
Confidence 45555 433 7899999988 789999999999999999999999943 333333211 1 12368
Q ss_pred eEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHH
Q 002263 238 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 316 (946)
Q Consensus 238 Di~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a 316 (946)
|++++|. |.|++ +++ |++++++++++.+... ...+ .. ..+.|. ....+
T Consensus 239 di~~~s~sK~~~~-----~~g-G~~~~~~~~~~~l~~~----------~~~~-----------~~-~~~~~~---~~~~a 287 (401)
T 1fc4_A 239 DIITGTLGKALGG-----ASG-GYTAARKEVVEWLRQR----------SRPY-----------LF-SNSLAP---AIVAA 287 (401)
T ss_dssp SEEEEESSSTTCS-----SSC-EEEEECHHHHHHHHHH----------CHHH-----------HH-SCCCCH---HHHHH
T ss_pred cEEEecchhhccC-----CCC-EEEEcCHHHHHHHHHh----------CcCc-----------ee-CCCCCH---HHHHH
Confidence 9999998 77743 233 8999998877655110 0000 00 111221 12222
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeeec--
Q 002263 317 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-- 391 (946)
Q Consensus 317 ~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~-- 391 (946)
..+++ ..+. + .+++.++..++.+++.+.|+++| +++.. .....+.+.+++ ..++.+.|.++||.++...
T Consensus 288 ~~~~l--~~~~-~-~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~ 361 (401)
T 1fc4_A 288 SIKVL--EMVE-A-GSELRDRLWANARQFREQMSAAG-FTLAG-ADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYP 361 (401)
T ss_dssp HHHHH--HHHH-T-CHHHHHHHHHHHHHHHHHHHHTT-CCBCC-SSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTT
T ss_pred HHHHH--HHHh-c-CHHHHHHHHHHHHHHHHHHHHcC-CcccC-CCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCC
Confidence 23332 2221 1 36778888999999999999987 77763 222334455543 6789999999999886532
Q ss_pred -----CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 -----SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 -----~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+|++++..+|++|+++++++|..
T Consensus 362 ~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (401)
T 1fc4_A 362 VVPKGQARIRTQMSAAHTPEQITRAVEAFTR 392 (401)
T ss_dssp SSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 24799999999999999999999973
No 183
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.74 E-value=3.7e-16 Score=178.30 Aligned_cols=288 Identities=18% Similarity=0.228 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCCE-------
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------- 591 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~~------- 591 (946)
+...++++.+++++|.+.+ +..++|+++..+++.+++.+... |..++++|++ ..+.|+....++...|.+
T Consensus 82 ~~~~~l~~~la~~~g~~~v-~~~~gg~~a~~~al~~~~~~~~~-~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~ 159 (397)
T 2ord_A 82 RPQMELAELLSKNTFGGKV-FFANTGTEANEAAIKIARKYGKK-KSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFE 159 (397)
T ss_dssp HHHHHHHHHHHHTTTSCEE-EEESSHHHHHHHHHHHHHHHHHH-HCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGC
T ss_pred HHHHHHHHHHHHhcCCCeE-EEeCCHHHHHHHHHHHHHHHhhc-CCCCCceEEEEcCCcCCCchhhhhccCChhhccccC
Confidence 3456788999999996543 55677887776666655543221 1112355665 457788888777778876
Q ss_pred -----EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccc---ccCHHHHHHHHHHcCCEEEEecccccccc
Q 002263 592 -----IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVY---EEGIDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 592 -----vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~---~~~i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
++.++. .|+++|+++++ +++++|++++| |.+|.+ ..++++|+++|+++|+++++|+++. .++
T Consensus 160 p~~~~~~~~~~-----~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~ 230 (397)
T 2ord_A 160 PLVPGFEYFEF-----NNVEDLRRKMS---EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMG 230 (397)
T ss_dssp SCCTTEEEECT-----TCHHHHHHHCC---TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTT
T ss_pred CCCCCeeEecC-----CCHHHHHHHhh---cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCc
Confidence 777776 38999999996 68999999998 568983 1279999999999999999999874 221
Q ss_pred cccCC---CccC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 663 GLTSP---GYIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 663 gl~~p---g~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
-...+ ..+| +|++++ +|+|+ +|.++|++++++++. .+.... ...+.+. +
T Consensus 231 ~~g~~~~~~~~~~~~d~~s~--sK~~~-----~G~r~G~~~~~~~~~-~l~~~~--------------~~~~~~~----~ 284 (397)
T 2ord_A 231 RTGKLFAYQKYGVVPDVLTT--AKGLG-----GGVPIGAVIVNERAN-VLEPGD--------------HGTTFGG----N 284 (397)
T ss_dssp TTSSSSHHHHHTCCCSEEEE--CGGGG-----TTSCCEEEEECSTTC-CCCTTS--------------SCCSSTT----C
T ss_pred cCccchhhhhhCCCCCeeee--ccccC-----CCcCeEEEEEchHhc-ccCCCC--------------cCCCCCC----C
Confidence 11111 1234 798765 69985 456899999988765 442110 0011121 2
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
....+++.+.|..+..+. ..++...+++++.+.|++. +.+. ..+ .+.+ +.++++. +.+..++.
T Consensus 285 ~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~~~~~~-----~~~~~~l~ 352 (397)
T 2ord_A 285 PLACRAGVTVIKELTKEG---FLEEVEEKGNYLMKKLQEMKEEYDVVADVRG-MGLM---IGIQFRE-----EVSNREVA 352 (397)
T ss_dssp HHHHHHHHHHHHHHTSTT---HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTE---EEEEECT-----TSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCceEEEEE-EeEE---EEEEECC-----hHHHHHHH
Confidence 333344455566555433 3445557788888888764 3321 111 1222 3455541 24678999
Q ss_pred HHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 813 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 813 ~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
++|.++|+.+.... ++.+|++++...+++|+++++++|++++++
T Consensus 353 ~~l~~~gi~v~~~~---~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 353 TKCFENKLLVVPAG---NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp HHHHHTTEECEEET---TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEccCC---CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 99999999874322 478999998889999999999999988654
No 184
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.74 E-value=5.3e-17 Score=186.36 Aligned_cols=301 Identities=11% Similarity=0.100 Sum_probs=195.0
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Cc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+..|. +. ..+..++|+++...+ ++.+. .++++|+++...|..+...+...|.+
T Consensus 75 ~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~---~~~~~-----~~gd~Vl~~~p~~~~~~~~~~~~g~~ 146 (412)
T 2x5d_A 75 RGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHL---MLATL-----DHGDTILVPNPSYPIHIYGAVIAGAQ 146 (412)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHH---HHHHC-----CTTCEEEEEESCCHHHHHHHHHHTCE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHH---HHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCE
Confidence 45555555555666555585 22 234555666555433 33321 24688999988777777778889999
Q ss_pred EEEEcCCCC-C-CCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccccc-ccc-
Q 002263 592 IVSVGTDAK-G-NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGL- 664 (946)
Q Consensus 592 vv~v~~~~~-g-~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl- 664 (946)
++.+|.+++ + .+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.... .+-
T Consensus 147 ~~~~~~~~~~~~~~d~~~l~~~i~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 223 (412)
T 2x5d_A 147 VRSVPLVPGIDFFNELERAIRESI---PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWK 223 (412)
T ss_dssp EEEEECSTTSCHHHHHHHHHHTEE---SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred EEEeecCCccCCCCCHHHHHHhcc---cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence 999998765 3 378999999886 678899999995 5888752 48999999999999999999874211 010
Q ss_pred -cCCCc----cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 665 -TSPGY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 665 -~~pg~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
..... .+.|+++.++||+|+. +|.++|++++++++.+.+..... .. ..+. +..
T Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~~------------~~--~~~~----~~~ 281 (412)
T 2x5d_A 224 APSIMQVPGAKDIAVEFFTLSKSYNM----AGWRIGFMVGNPELVSALARIKS------------YH--DYGT----FTP 281 (412)
T ss_dssp CCCGGGSTTGGGTEEEEEECC-CCSC----TTSCCEEEEECHHHHHHHHHHHH------------HH--CCCC----CHH
T ss_pred CCChhhccCccCcEEEEecCccccCC----cccceEEEEcCHHHHHHHHHHHh------------hh--ccCC----CHH
Confidence 01111 3678999999999853 46778999998776554321000 00 0111 122
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCC---CHHHHHHHH
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI---EPEDVAKRL 815 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~---~~~~i~~~L 815 (946)
...++.++|. .+.+.+.+..++...+++++.+.|++. +.+. .+.+..+ +.++++. +. +..++.++|
T Consensus 282 ~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~g~~--~~~~~~~-----~~~~~~~~~~~~~l 351 (412)
T 2x5d_A 282 LQVAAIAALE-GDQQCVRDIARQYQQRRDVLVKGLREAGWMVE--NPKASMY--VWAKIPE-----PYAHLGSLEFAKKL 351 (412)
T ss_dssp HHHHHHHHHH-SCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCC--CCSBSSE--EEEECCT-----TTGGGCHHHHHHHH
T ss_pred HHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEec--CCCeeeE--EEEEcCC-----ccCCCCHHHHHHHH
Confidence 2222333333 234556777777778899999999875 4432 2122221 3456541 34 678899999
Q ss_pred HH-CCcccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 816 MD-YGFHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 816 ~~-~Gi~~~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+ +||.+... .|. ..+++||+++. ++++++++++.|.+++++..
T Consensus 352 ~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 352 LQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp HHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcC
Confidence 75 69986432 221 24789999986 78999999999999887644
No 185
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.74 E-value=1.6e-17 Score=187.48 Aligned_cols=302 Identities=9% Similarity=0.020 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHhhCCCc-c-ccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH--HHHcCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDS-F-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~-~-~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~--a~~~G~~v 592 (946)
..+++.+.++.+++++|.+. . .++ +.+|+.+. -++++.+.. + .+++++++..+.|-+++.. ++..|+.+
T Consensus 56 ~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~---n~a~~~l~~-~--~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~ 129 (377)
T 3e77_A 56 FAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQF---SAVPLNLIG-L--KAGRCADYVVTGAWSAKAAEEAKKFGTIN 129 (377)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH---HHHHHHHGG-G--STTCEEEECCCSHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHH---HHHHHhccC-C--CCCCeEEEEECCHHHHHHHHHHHHhCCce
Confidence 56788999999999999974 2 233 34455444 344444322 1 1257787665544444432 55678888
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
+.++++.++..++++++.+++ ++|++|++++- |.+|++. |+ +|+++|++++||+++..+... ....++|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~i~---~~t~lV~~~h~et~tG~~~-pi-----i~~~~~~~~~vD~~q~~g~~~-id~~~~~ 199 (377)
T 3e77_A 130 IVHPKLGSYTKIPDPSTWNLN---PDASYVYYCANETVHGVEF-DF-----IPDVKGAVLVCDMSSNFLSKP-VDVSKFG 199 (377)
T ss_dssp ECSCCCSSSCSCCCGGGCCCC---TTCSCEEEESEETTTTEEC-SS-----CCCCTTCCEEEECTTTTTSSC-CCGGGCS
T ss_pred EEeccCCCcCCCCChHHhccC---CCccEEEEeCccCchheEc-hh-----hhccCCCEEEEEcccccCCCC-CchhhcC
Confidence 888887676778887776664 78888888876 4589998 67 477899999999987532211 1223454
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC---CCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~---~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
+++++.||+++ .||+|++++++++...++...-.. .++. ..+....|+++. .+....+.+
T Consensus 200 --~~~~s~~K~~g------p~G~g~l~~~~~~l~~~~~~~p~~-~~~~~~~~~~~~~~Tp~v~--------~i~~l~~al 262 (377)
T 3e77_A 200 --VIFAGAQKNVG------SAGVTVVIVRDDLLGFALRECPSV-LEYKVQAGNSSLYNTPPCF--------SIYVMGLVL 262 (377)
T ss_dssp --EEEEEGGGTTS------CTTCEEEEEETTSCSCCCTTSCGG-GCHHHHHTTTTCSSCCCHH--------HHHHHHHHH
T ss_pred --EEEEecccccC------CCccEEEEEcHHHHhhccCCCCch-hhHHHHhhcCCCCCCchHH--------HHHHHHHHH
Confidence 67889999983 468999999988776554211110 1110 011112233332 112223345
Q ss_pred HHHcHh-hHHHHHHHHHHHHHHHHHHHhccCCee-eccCCCcee-eeEEEecccccccCCCCH-----HHHHHHHHHCCc
Q 002263 749 AMMGSK-GLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVA-HEFIVDLRGLKNTAGIEP-----EDVAKRLMDYGF 820 (946)
Q Consensus 749 ~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~~~v~-~~~~~~~~~-~e~v~~~~~~~~~~g~~~-----~~i~~~L~~~Gi 820 (946)
.++-.+ |+.++.++...+++++.++|+++..+. ......... ..+.|.++ +++. ..+.+.|.++||
T Consensus 263 ~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~------~~~~~~~~~~~~l~~l~~~Gi 336 (377)
T 3e77_A 263 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIG------NAKGDDALEKRFLDKALELNM 336 (377)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEES------STTCCHHHHHHHHHHHHHTTE
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcC------CCCCchhHHHHHHHHHHHCCc
Confidence 555566 788888889999999999998752221 111111111 12445554 2222 356777788999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 821 ~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+..-. ...+++|+++...+|++|||+|+++|+++.++
T Consensus 337 ~~~~g~-~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 337 LSLKGH-RSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp ESCBCC-TTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCC-CcCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 864322 12367999999999999999999999998765
No 186
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.74 E-value=1.3e-16 Score=182.16 Aligned_cols=308 Identities=15% Similarity=0.036 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
...++++.+++++|.+.+ +..++|+++...++.+++ ..++++|+++...|.++...+...|++++.++++++
T Consensus 33 ~~~~l~~~la~~~~~~~v-~~~~ggt~al~~~~~~l~-------~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 104 (394)
T 1o69_A 33 FVNRFEQSVKDYSKSENA-LALNSATAALHLALRVAG-------VKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDET 104 (394)
T ss_dssp HHHHHHHHHHHHHCCSEE-EEESCHHHHHHHHHHHTT-------CCTTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHcC-------CCCCCEEEECCCccHHHHHHHHHcCCEEEEEEeCCC
Confidence 456888999999998654 455667665544433321 135689999999999888888899999999999878
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccC-CCc-cCCCEEEeC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGY-IGADVCHLN 678 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~-pg~-~GaDi~~~s 678 (946)
+.+|+++|++++++..+++++|++++ .+|... ++++|.++|+++|+++++|+++..+...... .+. .++|+.+++
T Consensus 105 ~~~d~~~l~~~i~~~~~~~~~v~~~~--~~G~~~-~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s 181 (394)
T 1o69_A 105 YNIDVDLLKLAIKECEKKPKALILTH--LYGNAA-KMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYN 181 (394)
T ss_dssp SSBCHHHHHHHHHHCSSCCCEEEEEC--GGGCCC-CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECC
T ss_pred CCcCHHHHHHHHhcccCCceEEEEEC--CCCChh-hHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEe
Confidence 89999999999984322688999986 578887 8999999999999999999987532211111 112 357788888
Q ss_pred CCcccccCCCCCCCcceeEEEe-cccCCCCCC-CccccCCCCCCCC-CCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 679 LHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGIPAPE-KSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 679 ~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~~d~~~~~-~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
.||.+ ||+++|+++++ +++.+.+.. ...+.... .... .+.+ .+..+ +...++.+ +.. .+-
T Consensus 182 ~~K~l------~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~g-~~~~~----~~~~aa~~---l~~--l~~ 244 (394)
T 1o69_A 182 GNKII------TTSGGGMLIGKNKEKIEKARFYSTQARENC-LHYEHLDYG-YNYRL----SNVLGAIG---VAQ--MEV 244 (394)
T ss_dssp TTSSS------CCSSCEEEEESCHHHHHHHHHHTBTCCCSS-SSCCCSSCC-CBCBC----CHHHHHHH---HHH--HTT
T ss_pred CCccC------CCCCceEEEECCHHHHHHHHHHHHhccccC-ccccccccC-cccCc----CHHHHHHH---HHH--HHH
Confidence 88976 34578999995 555433210 00000000 0000 0000 00001 11111111 111 123
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCC-C--ceeeeEEEeccccc----------------ccCCCCHHHHHHHHH
Q 002263 756 LTEASKIAILNANYMAKRLEKHYPILFRGVN-G--TVAHEFIVDLRGLK----------------NTAGIEPEDVAKRLM 816 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~-~--~~~~e~v~~~~~~~----------------~~~g~~~~~i~~~L~ 816 (946)
+.+..++...+++++.+.|++. +.+.++. . +.++.+.+.++.-. ...+++..++.+.|.
T Consensus 245 l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (394)
T 1o69_A 245 LEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLK 322 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHH
Confidence 5556667778889999999875 3221211 1 12223445543100 000235778999999
Q ss_pred HCCcccCCCCCC-----C-C---------------CEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 817 DYGFHGPTMSWP-----V-P---------------GTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 817 ~~Gi~~~~~~~p-----~-~---------------~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
++||.+.....| . . ..+++.....+|++|+|+++++|+++++
T Consensus 323 ~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 323 NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 999987543211 0 1 3455556777999999999999987744
No 187
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.74 E-value=4.7e-16 Score=180.77 Aligned_cols=310 Identities=14% Similarity=0.130 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCCHHHHHHcC--------
Q 002263 520 EMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCG-------- 589 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~~~~~a~~~G-------- 589 (946)
+...++.++++++++.+. ..++.++|++++++++.+++.|+...|..++++||++ .+.||....+....|
T Consensus 87 ~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 166 (448)
T 3dod_A 87 VPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVY 166 (448)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccc
Confidence 445678899999986543 2466788999988888888877655665457888865 455776655433333
Q ss_pred ----CEEEEEcCCCCCCC-----------CHHHHHHHHHhcCCCeEEEEEeCC--Cccccccc---CHHHHHHHHHHcCC
Q 002263 590 ----MKIVSVGTDAKGNI-----------NIEELRKAAEANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGG 649 (946)
Q Consensus 590 ----~~vv~v~~~~~g~~-----------D~e~L~~~i~~~~~~t~~vvvt~P--n~~G~~~~---~i~~I~~ia~~~g~ 649 (946)
..+..++.+...+. |+++|+++++++.+++++|+++.+ +..|.+.+ .+++|+++|++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~ 246 (448)
T 3dod_A 167 GPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDV 246 (448)
T ss_dssp ------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTC
T ss_pred cCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCC
Confidence 23445555332222 589999999754467888887765 45666542 29999999999999
Q ss_pred EEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCC
Q 002263 650 QVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPA 720 (946)
Q Consensus 650 ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~ 720 (946)
++|+|.++. ++.+.|. ...|+++++ |+|+ +| .++|++++++++.+.+.......
T Consensus 247 ~lI~DEv~~----g~g~~g~~~a~~~~~~~~di~t~s--K~l~-----~G~~~ig~v~~~~~~~~~~~~~~~~~------ 309 (448)
T 3dod_A 247 LMIVDEVAT----GFGRTGKMFACEHENVQPDLMAAG--KGIT-----GGYLPIAVTFATEDIYKAFYDDYENL------ 309 (448)
T ss_dssp EEEEECTTT----TTTTTSSSSGGGGGTCCCSEEEEC--GGGG-----TTSSCCEEEEEEHHHHHTTCSCGGGC------
T ss_pred EEEEecccc----CCCcccchhhhhhcCCCCCEEEec--cccc-----CCcCceEEEEECHHHHHHhhhccccC------
Confidence 999999753 3332221 236888764 9884 46 47899999988776653210000
Q ss_pred CCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEe
Q 002263 721 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVD 796 (946)
Q Consensus 721 ~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~ 796 (946)
+ .-...+..+ ++...++++.+.|..+..+++.+ +...+.++++++|++. +... ..+ .+.+ +.++
T Consensus 310 ~-~~~~~~t~~----~~~~~~aaa~aal~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~~~~~~~~~-~g~~---~~~~ 377 (448)
T 3dod_A 310 K-TFFHGHSYT----GNQLGCAVALENLALFESENIVE---QVAEKSKKLHFLLQDLHALPHVGDIRQ-LGFM---CGAE 377 (448)
T ss_dssp C-CCCCCCTTT----TCHHHHHHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTE---EEEE
T ss_pred C-cccccCCCC----cCHHHHHHHHHHHHHHhcccHHH---HHHHHHHHHHHHHHHHhcCCCeEEEEe-eeEE---EEEE
Confidence 0 000001122 23444555666666655554443 3345566777776652 2211 111 1222 2344
Q ss_pred ccccccc-CCC-----CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 797 LRGLKNT-AGI-----EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 797 ~~~~~~~-~g~-----~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+...... ... ...+++++|.++|+.+.. .++.+|++|+...|+++|+++++.|+++++++..
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 378 LVRSKETKEPYPADRRIGYKVSLKMRELGMLTRP----LGDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp ECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCE----ETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EccCcccccccchhhHHHHHHHHHHHHCCcEEec----cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 3311000 000 047899999999998752 2489999999999999999999999999887654
No 188
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.74 E-value=2.6e-17 Score=188.57 Aligned_cols=303 Identities=15% Similarity=0.080 Sum_probs=195.0
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
+|..++...+.+++.+..|++ ... +..++|+++... +++.+. .++++|+++...|..+...+...|+++
T Consensus 78 ~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~---~~~~l~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~ 149 (406)
T 1xi9_A 78 EGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQL---IFGALL-----DPGDEILVPGPSYPPYTGLVKFYGGKP 149 (406)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH---HHHHHC-----CTTCEEEEEESCCHHHHHHHHHTTCEE
T ss_pred CCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHH---HHHHhC-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 466666667777777766654 333 444555555433 333321 246889999887777667788899999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-cc
Q 002263 593 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 665 (946)
Q Consensus 593 v~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~g-l~ 665 (946)
+.++.++ ++.+|+++|+++++ +++++|++++| |.+|.+. .++++|+++|+++|+++++|+++.... ++ ..
T Consensus 150 ~~v~~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 226 (406)
T 1xi9_A 150 VEYRTIEEEDWQPDIDDIRKKIT---DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI 226 (406)
T ss_dssp EEEEEEGGGTSEECHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC
T ss_pred EEeecCCCcCCcCCHHHHHHhhC---cCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCC
Confidence 9999875 35689999999996 68999999998 4689874 259999999999999999999864211 11 01
Q ss_pred CCCc--cCC-CEEEeCCCcccccCCCCCCCcceeEE--Eec----ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 666 SPGY--IGA-DVCHLNLHKTFCIPHGGGGPGMGPIG--VKK----HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 666 ~pg~--~Ga-Di~~~s~hK~f~~P~g~GGPg~G~i~--~~~----~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
.... .+. |+++.++||+|+. +|.++|+++ +++ ++.+.+... ... . .+.+
T Consensus 227 ~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~l~~~l~~~------------~~~-~--~~~~--- 284 (406)
T 1xi9_A 227 SPGSLTKDVPVIVMNGLSKVYFA----TGWRLGYMYFVDPENKLSEVREAIDRL------------ARI-R--LCPN--- 284 (406)
T ss_dssp CHHHHCSSSCEEEEEESTTTTCC----GGGCCEEEEEECTTCTTHHHHHHHHHH------------HHH-T--CCSC---
T ss_pred CHHHcCCCceEEEEeccccccCC----CccEEEEEEEecCchhHHHHHHHHHHH------------HHh-h--cCCC---
Confidence 1112 255 7888999999852 345689988 666 555433210 000 0 1111
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 816 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~ 816 (946)
.....++.++|. .+.+++.+..++...+++++.+.|++...+.+..+.+..+ +.++++.. .+.+..++.++|.
T Consensus 285 -~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~l~~~l~ 357 (406)
T 1xi9_A 285 -TPAQFAAIAGLT-GPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFY--IFPKIEVG---PWKNDKEFVLDVL 357 (406)
T ss_dssp -SHHHHHHHHHHH-SCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSE--ECCEECSC---SCSSHHHHHHHHH
T ss_pred -HHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEE--EEEecCcc---CCCCHHHHHHHHH
Confidence 111222333333 2345567777777788899999998742332212222221 22344310 0356789999997
Q ss_pred -HCCcccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 817 -DYGFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 817 -~~Gi~~~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
++|+.+.. ..|. ..+.+||++. +++++|+++++.|.++++++
T Consensus 358 ~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 358 HNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp HHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred HhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 88998642 2232 2578999997 78999999999999887654
No 189
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.74 E-value=1.3e-16 Score=184.68 Aligned_cols=268 Identities=19% Similarity=0.182 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 177 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~- 177 (946)
....++++.+|+++|.+ ...++.+|++++.+++.++. . +||+||+++..|+++...++..++..|+++++++.+
T Consensus 114 ~~~~~l~~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~-~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d 188 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAE--STLLMASGMCASTVMLLALV-P--AGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPAD 188 (445)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHS-C--SSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSC
T ss_pred hHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh-C--CCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCC
Confidence 34567889999999986 36677788777776666542 3 789999999999998888766566789999999875
Q ss_pred --cccc-cCCCE-eEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccC
Q 002263 178 --DIDY-KSGDV-CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPM 251 (946)
Q Consensus 178 --~l~~-i~~~t-~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~ 251 (946)
++++ ++++| ++|++.+| |.+|.+.|+++|+++||++|++++++ +.++.+....+.++|+|+++.|+ |.++
T Consensus 189 ~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD-~a~~~~~~~~~~~~g~Div~~S~sK~~g--- 264 (445)
T 1qgn_A 189 VGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCID-GTFATPLNQKALALGADLVLHSATKFLG--- 264 (445)
T ss_dssp HHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEE-CTTTCTTTCCTTTTTCSEEEECTTTTTT---
T ss_pred HHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCcccccCCccccCCEEEEECCccccc---
Confidence 4555 67788 99999998 68999999999999999999999995 34454545566789999999998 6553
Q ss_pred CCCCCc---eEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhCh
Q 002263 252 GYGGPH---AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 328 (946)
Q Consensus 252 ~~GGP~---~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~ 328 (946)
|++ +|++++++++++.+... ++.-|+.. .++.+ |+...+-
T Consensus 265 ---g~gd~~~G~l~~~~~l~~~l~~~-------------------------~~~~g~~~----~~~~a-----~~~~~~l 307 (445)
T 1qgn_A 265 ---GHNDVLAGCISGPLKLVSEIRNL-------------------------HHILGGAL----NPNAA-----YLIIRGM 307 (445)
T ss_dssp ---CSSSCCCEEEEECHHHHHHHHHH-------------------------HHHHCCCC----CHHHH-----HHHHHHG
T ss_pred ---ccccceEEEEEECHHHHHHHHHH-------------------------HHHhCCCC----CHHHH-----HHHHHhH
Confidence 333 78999998876654100 01111110 11111 1111222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCE-EEcCC-----C-----------CcCeEEEecCC----HHHHHHHHHHcCCee
Q 002263 329 EGLKTIAQRVHGLAGTFALGLKKLGTV-EVQGL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEMNL 387 (946)
Q Consensus 329 ~Gl~~i~~~~~~~a~~l~~~L~~~g~~-~~~~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~~GI~~ 387 (946)
+.+....++..+++.++++.|++.+++ .+..+ + ....+.|.+++ +..+.+.|...++.+
T Consensus 308 ~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~ 387 (445)
T 1qgn_A 308 KTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAP 387 (445)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEec
Confidence 334444556677789999999988547 44321 1 23457777764 334444443223321
Q ss_pred e------e---------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 388 R------V---------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 388 ~------~---------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+ . +.++.||+|++ .||++++++.|.
T Consensus 388 s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~ 439 (445)
T 1qgn_A 388 SFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADIL 439 (445)
T ss_dssp CCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHH
T ss_pred cCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHH
Confidence 1 0 12478999998 357777777775
No 190
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.74 E-value=2.6e-17 Score=189.30 Aligned_cols=305 Identities=14% Similarity=0.138 Sum_probs=195.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--c-cc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--S-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~-~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|.+ . .. +..++|+++.. ++++.+. .++++|+++...|..+...+...|.+
T Consensus 67 ~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~---~~~~~~~-----~~gd~vl~~~p~~~~~~~~~~~~g~~ 138 (422)
T 3fvs_A 67 FGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALF---TAFQALV-----DEGDEVIIIEPFFDCYEPMTMMAGGR 138 (422)
T ss_dssp TCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHH---HHHHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHH---HHHHHHc-----CCCCEEEEcCCCchhhHHHHHHcCCE
Confidence 466677777788888877764 2 23 44444554443 3334321 25678999988888888888999999
Q ss_pred EEEEcCCC----CC--------CCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecc
Q 002263 592 IVSVGTDA----KG--------NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGA 656 (946)
Q Consensus 592 vv~v~~~~----~g--------~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a 656 (946)
++.+++++ +| .+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|++
T Consensus 139 ~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 215 (422)
T 3fvs_A 139 PVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT---SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEV 215 (422)
T ss_dssp EEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred EEEEecccccccccccccccCCCCCHHHHHhhcC---CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEcc
Confidence 99999876 33 689999999986 789999999995 6898862 599999999999999999998
Q ss_pred ccc-cccccc--C----CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCC
Q 002263 657 NMN-AQVGLT--S----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 729 (946)
Q Consensus 657 ~~~-a~~gl~--~----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~ 729 (946)
+.. ...+-. . +...+.++++.+++|+|+. .|.++|++.+++++.+.+.... ....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~--------------~~~~ 277 (422)
T 3fvs_A 216 YQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSA----TGWKVGWVLGPDHIMKHLRTVH--------------QNSV 277 (422)
T ss_dssp TTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTC----GGGCCEEEECCHHHHHHHHHHH--------------HTTT
T ss_pred chhhccCCCCCCChhhcccccCcEEEEecchhccCC----ccceEEEEEeCHHHHHHHHHHH--------------hhcc
Confidence 642 111110 1 1123455888889999853 4678999998877655432100 0001
Q ss_pred cccCccchhhHHHHHHHHHHH------HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccc
Q 002263 730 IAAAPWGSALILPISYTYIAM------MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN 802 (946)
Q Consensus 730 i~~~~~g~~~~~~~a~a~l~~------lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~ 802 (946)
.+. +.....++.+++.. ...+.+.+..++...+.+++.+.|++. +.+.. +.+..+ ++++++....
T Consensus 278 ~~~----~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~--~~~~~~~~~~ 349 (422)
T 3fvs_A 278 FHC----PTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPII--PQGSYF--LITDISDFKR 349 (422)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEB--CSBSSE--EEEECHHHHH
T ss_pred CCC----CcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecC--CCeeeE--EEEechhhcc
Confidence 111 12222223333332 124456677777778899999999875 33322 222222 3455542110
Q ss_pred cC----C---CC-HHHHHHHHH-HCCcccCC-CCC-------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 803 TA----G---IE-PEDVAKRLM-DYGFHGPT-MSW-------PVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 803 ~~----g---~~-~~~i~~~L~-~~Gi~~~~-~~~-------p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.. + .. ..++.++|. ++|+.+.. ..| ...+.+||+++. ++++|+++++.|++++++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 350 KMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC--CHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHhh
Confidence 00 0 00 557888765 57997532 222 125889999875 899999999999987653
No 191
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.74 E-value=6.8e-16 Score=178.62 Aligned_cols=289 Identities=16% Similarity=0.228 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHH-hcCCC-CCCEEEEcC-CCCCCCHHHHHHcC--------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHK-ARGDH-HRNVCIIPV-SAHGTNPATAAMCG-------- 589 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~-~~G~~-~~~~Ili~~-saHg~~~~~a~~~G-------- 589 (946)
...++++.+++++|.+.+ ++.++|++++++++.+++.|.. .+|.. ++++||+++ +.||....++.+.|
T Consensus 108 ~~~~l~~~la~~~g~~~v-~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~ 186 (433)
T 1z7d_A 108 PLGICERYLTNLLGYDKV-LMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 186 (433)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHHhhcCCCeE-EEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccC
Confidence 456788899999987654 5678888888777777665532 23322 347787665 67776655555444
Q ss_pred ----CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc---cCHHHHHHHHHHcCCEEEEeccccccc
Q 002263 590 ----MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQ 661 (946)
Q Consensus 590 ----~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~---~~i~~I~~ia~~~g~ll~vD~a~~~a~ 661 (946)
.+++.+|. .|+++|+++++ .+++++|+++.. +.+|++. .++++|.++|++||+++++|+++.
T Consensus 187 ~p~~~~v~~~~~-----~d~~~le~~l~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~--- 256 (433)
T 1z7d_A 187 GPFAPQFSKVPY-----DDLEALEEELK--DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT--- 256 (433)
T ss_dssp -----CEEEECT-----TCHHHHHHHHT--STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT---
T ss_pred CCCCCCeEEeCC-----CCHHHHHHHhC--CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc---
Confidence 34566665 38999999995 267888776643 3468753 269999999999999999999863
Q ss_pred ccccCCC--------ccCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCccc
Q 002263 662 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 732 (946)
Q Consensus 662 ~gl~~pg--------~~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~ 732 (946)
|+.+.| ...+|++++ +|+|+ || .++|++++++++.+.+.... + ....+
T Consensus 257 -g~g~~g~~~~~~~~~~~~di~t~--sK~l~-----~G~~~~G~v~~~~~~~~~l~~~~---------~-----~~t~~- 313 (433)
T 1z7d_A 257 -GLGRTGKLLCVHHYNVKPDVILL--GKALS-----GGHYPISAVLANDDIMLVIKPGE---------H-----GSTYG- 313 (433)
T ss_dssp -TTTTTSSSSGGGGGTCCCSEEEE--CGGGG-----TTSSCCEEEEECHHHHTTCCTTC---------C-----CCTTT-
T ss_pred -CCCcCCcchhhHhcCCCCCEEEE--Ccccc-----CCCCCeEEEEECHHHHhhhcccc---------c-----cccCC-
Confidence 232221 124798865 59884 45 56899999988766553210 0 01112
Q ss_pred CccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCC
Q 002263 733 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE 807 (946)
Q Consensus 733 ~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~ 807 (946)
++...++++.+.+..+..+++. ++...+.+++.++|++. +.+. ..+ .+.+ +.+++.. .+.+
T Consensus 314 ---~~~~~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-~g~~---~~i~~~~----~~~~ 379 (433)
T 1z7d_A 314 ---GNPLAASICVEALNVLINEKLC---ENAEKLGGPFLENLKRELKDSKIVRDVRG-KGLL---CAIEFKN----ELVN 379 (433)
T ss_dssp ---TCHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHTTCTTEEEEEE-ETTE---EEEEECT----TTCC
T ss_pred ---CCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHHhCCCeEEEEe-eeeE---EEEEEcc----ChhH
Confidence 2344445556666666554443 44456788888888763 3221 112 1222 3455431 0135
Q ss_pred HHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 808 PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 808 ~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..++.++|.++|+.+.... .+.+|++++...|++|+|+++++|+++++++
T Consensus 380 ~~~~~~~l~~~Gv~v~~~~---~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 380 VLDICLKLKENGLITRDVH---DKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp HHHHHHHHHHTTEECCEET---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecCC---CCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 7899999999999875321 4789999999999999999999999987764
No 192
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.74 E-value=3.3e-17 Score=189.00 Aligned_cols=307 Identities=12% Similarity=0.090 Sum_probs=194.3
Q ss_pred ccHHHHHHHHHHHHHHhhCC---CcccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGF---DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~---~~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
+|..++...+.+++.+.+|. +...+..++| +++.. ++++.+. .++++|+++...|..+...+...|++
T Consensus 85 ~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~---~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 156 (425)
T 1vp4_A 85 EGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALD---LIGKLFL-----DDESYCVLDDPAYLGAINAFRQYLAN 156 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHH---HHHHHHC-----CTTCEEEEEESCCHHHHHHHHTTTCE
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHH---HHHHHhC-----CCCCEEEEeCCCcHHHHHHHHHcCCE
Confidence 45555555566666555584 4444444444 43443 3344431 24588999888776666678889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhc-----CCCeEEE-EEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccc-
Q 002263 592 IVSVGTDAKGNINIEELRKAAEAN-----RDNLSTL-MVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ- 661 (946)
Q Consensus 592 vv~v~~~~~g~~D~e~L~~~i~~~-----~~~t~~v-vvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~- 661 (946)
++.+|.++++ +|+++|++++++. +.++++| ++++| |.+|.+.+ ++++|+++|+++|+++++|+++....
T Consensus 157 ~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 235 (425)
T 1vp4_A 157 FVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRY 235 (425)
T ss_dssp EEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBC
T ss_pred EEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccC
Confidence 9999987766 9999999999741 1378887 46788 46888752 47899999999999999999874211
Q ss_pred cccc--CCC---ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 662 VGLT--SPG---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 662 ~gl~--~pg---~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
.+-. ... ..+.++++.+++|+|+ +|.++|++++++++.+.+..... ....++
T Consensus 236 ~g~~~~~~~~~~~~~~~i~~~s~sK~~~-----~G~r~G~~~~~~~~~~~l~~~~~--------------~~~~~~---- 292 (425)
T 1vp4_A 236 EGETVDPIFKIGGPERVVLLNTFSKVLA-----PGLRIGMVAGSKEFIRKIVQAKQ--------------SADLCS---- 292 (425)
T ss_dssp SSCCCCCHHHHHCTTTEEEEEESTTTTC-----GGGCEEEEECCHHHHHHHHHHHH--------------HHHSSC----
T ss_pred CCCCCcCHHHhCCCCCEEEEeccccccc-----cccceEEEeeCHHHHHHHHHHhh--------------hhcCCC----
Confidence 1110 111 1245688889999984 25568999998776554321000 000111
Q ss_pred hhhHHHHHHHHHHHHc-HhhHHHHHHHHHHHHHHHHHHHhccC----CeeeccCCCceeeeEEEecccccccCCCCHHHH
Q 002263 737 SALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKRLEKHY----PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 811 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG-~eGl~~~~~~~~~~a~~l~~~L~~~~----~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i 811 (946)
+.....++.++|.... .+.+.+..++...+++++.+.|++.+ .+.+..+.+..+ +.++++. +.+..++
T Consensus 293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~--~~~~~~~-----~~~~~~l 365 (425)
T 1vp4_A 293 PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLF--IWLTLPE-----GFDTWEM 365 (425)
T ss_dssp CHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSE--EEEECCT-----TCCTTTT
T ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEE--EEEEcCC-----CCCHHHH
Confidence 1222223334443321 33455566666678889999998742 232222222221 4466541 3456789
Q ss_pred HHHHHHCCcccCC-CCCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 812 AKRLMDYGFHGPT-MSWP----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 812 ~~~L~~~Gi~~~~-~~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.++|.++|+.+.. ..|. ..+++||++... ++++++++++.|+++++++.+
T Consensus 366 ~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 366 FEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp HHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998642 2231 247899999874 899999999999999887654
No 193
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.74 E-value=5.3e-16 Score=180.49 Aligned_cols=308 Identities=17% Similarity=0.214 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC--------
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM-------- 590 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~-------- 590 (946)
+...++.++++++++.+...++.++|++++++++.+++.|+..+|..++++||+ ..+.||....+....|.
T Consensus 91 ~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 170 (452)
T 3n5m_A 91 EPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYE 170 (452)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTC
T ss_pred HHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccC
Confidence 456688899999998654356778899999888888887765554445677775 56778877666544332
Q ss_pred ----EEEEEcCCCCCC---CC---------HHHHHHHHH-hcCCCeEEEEEeCC--Cccccccc---CHHHHHHHHHHcC
Q 002263 591 ----KIVSVGTDAKGN---IN---------IEELRKAAE-ANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNG 648 (946)
Q Consensus 591 ----~vv~v~~~~~g~---~D---------~e~L~~~i~-~~~~~t~~vvvt~P--n~~G~~~~---~i~~I~~ia~~~g 648 (946)
.+..++...... -| +++|+++++ ++.+++++|+++.+ | +|++.+ .+++|+++|++||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~ 249 (452)
T 3n5m_A 171 PFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHG 249 (452)
T ss_dssp CCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHT
T ss_pred CCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcC
Confidence 345555422111 12 899999997 33467888888887 7 887651 2999999999999
Q ss_pred CEEEEecccccccccccCCCc------c--CCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCC
Q 002263 649 GQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIP 719 (946)
Q Consensus 649 ~ll~vD~a~~~a~~gl~~pg~------~--GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~ 719 (946)
+++|+|.++. ++.+.|. + ..|++++ .|+|+ +| .++|++++++++.+.+...... ..
T Consensus 250 ~llI~DEv~~----g~g~~g~~~~~~~~~~~~di~t~--sK~l~-----~G~~~ig~~~~~~~i~~~~~~~~~~--~~-- 314 (452)
T 3n5m_A 250 ALLISDEVIC----GFGRTGKAFGFMNYDVKPDIITM--AKGIT-----SAYLPLSATAVKREIYEAFKGKGEY--EF-- 314 (452)
T ss_dssp CEEEEECTTT----TTTTTSSSSGGGGTTCCCSEEEE--CGGGG-----TTSSCCEEEEEEHHHHGGGCSSSTT--CS--
T ss_pred CEEEEecchh----CCCcccccchhhhcCCCCCEEee--ccccc-----CCCcceEEEEECHHHHHHHhhccCC--CC--
Confidence 9999998753 3333221 2 3688876 49884 46 7899999998877665320000 00
Q ss_pred CCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC-e-eeccCCCceeeeEE
Q 002263 720 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-I-LFRGVNGTVAHEFI 794 (946)
Q Consensus 720 ~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~-v-~~~~~~~~~~~e~v 794 (946)
. ...+..+ ++...++++.+.+..+..+++.+ +...+.++++++|++. +. + ...+ .+.+. .
T Consensus 315 ---~-~~~~t~~----~~~~~~aaa~aal~~~~~~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~---~ 379 (452)
T 3n5m_A 315 ---F-RHINTFG----GNPAACALALKNLEIIENENLIE---RSAQMGSLLLEQLKEEIGEHPLVGDIRG-KGLLV---G 379 (452)
T ss_dssp ---C-CCCCSST----TCHHHHHHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHHTTCTTEEEEEE-SSSCE---E
T ss_pred ---c-cccCCCC----CCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHhcCCCeEEEEE-EEEEE---E
Confidence 0 0001112 23444555666666665555443 3445667777777653 22 1 1122 23222 2
Q ss_pred Eeccccccc-CCC---CHHHHHHHHHHCCcccCCCCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 795 VDLRGLKNT-AGI---EPEDVAKRLMDYGFHGPTMSWP---VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 795 ~~~~~~~~~-~g~---~~~~i~~~L~~~Gi~~~~~~~p---~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+++...... ... ...++.+.|.++|+.+.....+ ..+.+||+|+...|++||+++++.|+++++
T Consensus 380 i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 380 IELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp EEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 332110000 000 1357899999999987543322 247899999999999999999999998865
No 194
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.74 E-value=2.4e-16 Score=179.91 Aligned_cols=342 Identities=15% Similarity=0.142 Sum_probs=212.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCcce-eecCCCCCC-CCCcHHHHHHHH-------hCCccccccCCChhhhhhhHH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKVYK-SFIGMGYYN-THVPPVILRNIM-------ENPAWYTQYTPYQAEIAQGRL 98 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~~~-~~~G~g~~~-~~~p~~i~~~i~-------~~~~~~t~~~pyq~e~sqg~l 98 (946)
.+| ++|+||.+|...|.+++.++..+. .-.|.|--. .+.-+-+...-+ ...+|+++ .| ...-+.+..
T Consensus 22 ~~p--~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~~~~~d~l~~-~~-~~~~~~~~~ 97 (450)
T 3bc8_A 22 KCP--EDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAV-QP-KAAGSSLLN 97 (450)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCBCC--------CC-SBHHHHHHH
T ss_pred cCC--ccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecchhHHHHHHHh-Cc-cccCCcHHH
Confidence 577 689999999999999998765432 112322111 111111111000 00133333 22 112233444
Q ss_pred HHHHHHHHHHHHHhCCCCcce-EEcccHHHHHHHHHHHh-ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 99 ESLLNFQTMIADLTGLPMSNA-SLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~-sl~~~~Ta~~ea~~la~-~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
..-.++...+.+++|++.... .+++++|+++.++.++. +-.+.++++||+++++|.|+.+.+.. .|+..+++++
T Consensus 98 ~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l----~Gl~p~~v~~ 173 (450)
T 3bc8_A 98 KITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVT----AGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHH----TTCEEEEECC
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHH----cCCeeEEEEe
Confidence 555566678889999987654 67889987888876643 31111378999999999999998753 4777777654
Q ss_pred -----------ccccc-cC--C-CEeEEEEEcCCCce--eecchHHHHHHHHhCCcEEEEEecCccccCCC-----CC-C
Q 002263 177 -----------KDIDY-KS--G-DVCGVLVQYPGTEG--EVLDYGDFIKNAHANGVKVVMATDLLALTILK-----PP-G 233 (946)
Q Consensus 177 -----------~~l~~-i~--~-~t~~v~v~~pn~~G--~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-----~~-~ 233 (946)
++|++ |. + +..++++++|+++| .+.||++|+++||++|++++|+. ++|... -+ .
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~---A~G~~~~~~~~l~~~ 250 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNN---AYGLQSSKCMHLIQQ 250 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEEC---TTTTTCHHHHHHHHH
T ss_pred eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEEC---CCchhhhhhHhHHHH
Confidence 34555 42 2 35567777888877 88999999999999999999953 233211 01 1
Q ss_pred --Cc-cceEEEecc-ccccccCCCCCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCc
Q 002263 234 --EL-GADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 308 (946)
Q Consensus 234 --~~-GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni 308 (946)
+. |||+++.|. |+++.|.+ .+++.+++ ++.+++.. . |. .+ .|
T Consensus 251 a~~~~~AD~~v~S~HK~l~a~~~-----~~~l~~rd~~~~~~~~~-------~------~~----------g~--~s--- 297 (450)
T 3bc8_A 251 GARVGRIDAFVQSLDKNFMVPVG-----GAIIAGFNEPFIQDISK-------M------YP----------GR--AS--- 297 (450)
T ss_dssp HHHHSCCCEEEEEHHHHHSCCSS-----CEEEEESCHHHHHHHHH-------H------SC----------SC--BC---
T ss_pred HhcccCCCEEEECCccCCCchhc-----cEEEEecCHHHHHHHHH-------H------hh----------cC--Cc---
Confidence 22 799999999 77777753 46777754 33333200 0 00 01 11
Q ss_pred cchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcC-eEEEec-------CC-HHHH
Q 002263 309 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFD-TVKVKC-------AD-AHAI 376 (946)
Q Consensus 309 ~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~-~~~i~~-------~~-~~~v 376 (946)
.++.+.+..++ ..+|.+|++++.++..+++++++++|+++. ++.+++.+... ...+.. +. ..++
T Consensus 298 --~SpsL~l~~~l--~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl 373 (450)
T 3bc8_A 298 --ASPSLDVLITL--LSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQL 373 (450)
T ss_dssp --SHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHH
T ss_pred --ccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCcee
Confidence 12333444343 345999999999999999999999998764 47777543221 222322 11 4556
Q ss_pred HHHHHHcCC------------------------eeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 377 ASAAYKIEM------------------------NLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 377 ~~~L~~~GI------------------------~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.-.+...|+ .++..+...|.+.++..++++|+++|+++|..
T Consensus 374 ~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~ 438 (450)
T 3bc8_A 374 GSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDK 438 (450)
T ss_dssp HHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHH
Confidence 666655443 22333457899999999999999999999973
No 195
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.73 E-value=9e-16 Score=179.02 Aligned_cols=312 Identities=15% Similarity=0.150 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC-------
Q 002263 520 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~------- 590 (946)
+...++.++++++++.+.. .++.++|++++++++.+++.|+..+|..++++||+ ..++||....+....|.
T Consensus 95 ~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 174 (460)
T 3gju_A 95 EASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAF 174 (460)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTT
T ss_pred HHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCccccccc
Confidence 4566888999998865532 36678899999888888888877777666777775 56778888776554332
Q ss_pred -----EEEEEcCCC-----CCCCC--------HHHHHHHHHhcC-CCeEEEEEeCCC-ccccccc---CHHHHHHHHHHc
Q 002263 591 -----KIVSVGTDA-----KGNIN--------IEELRKAAEANR-DNLSTLMVTYPS-THGVYEE---GIDEICKIIHDN 647 (946)
Q Consensus 591 -----~vv~v~~~~-----~g~~D--------~e~L~~~i~~~~-~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~~ 647 (946)
.++.++... +...+ +++|++++++.. +++++|+++.++ +.|++.+ .+++|+++|++|
T Consensus 175 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 254 (460)
T 3gju_A 175 DLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKY 254 (460)
T ss_dssp TCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT
T ss_pred CCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 345555321 11123 689999997533 467777777654 5666541 299999999999
Q ss_pred CCEEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC
Q 002263 648 GGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 719 (946)
Q Consensus 648 g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~ 719 (946)
|++|++|.++. ++.+.|. .-.|+++++ |+++ +|+.++|++++++++.+.+....... .
T Consensus 255 ~~llI~DEv~~----g~gr~g~~~~~~~~~~~pdi~t~s--K~l~----gG~~~lg~v~~~~~i~~~~~~~~~~~-~--- 320 (460)
T 3gju_A 255 DVLLVADEVVT----GFGRLGTMFGSDHYGIKPDLITIA--KGLT----SAYAPLSGVIVADRVWQVLVQGSDKL-G--- 320 (460)
T ss_dssp TCEEEEECTTT----TTTTTSSSCHHHHHTCCCSEEEEC--GGGT----TTSSCCEEEEEEHHHHHHHHHHHHHH-C---
T ss_pred CCEEEEecccc----CCCcccccchHhhcCCCCCeeeee--hhhc----CCCCCeEEEEECHHHHHHHhcccccc-c---
Confidence 99999998753 4433332 236888764 9873 34478999999987766542000000 0
Q ss_pred CCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee-eccCCCceeeeEE
Q 002263 720 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL-FRGVNGTVAHEFI 794 (946)
Q Consensus 720 ~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~-v~-~~~~~~~~~~e~v 794 (946)
.-...+..+ ++...++++.+.|..+..+.+.+. ...+.++++++|.+. +. +. ..+ .+.+ +.
T Consensus 321 ---~~~~~~t~~----~~~~~~aaa~aal~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~-~g~~---~~ 386 (460)
T 3gju_A 321 ---SLGHGWTYS----AHPICVAAGVANLELIDEMDLVTN---AGETGAYFRAELAKAVGGHKNVGEVRG-DGML---AA 386 (460)
T ss_dssp ---SCSCCCTTT----TCHHHHHHHHHHHHHHHHTTHHHH---HHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTE---EE
T ss_pred ---ccccCCCCC----CCHHHHHHHHHHHHHHHhccHHHH---HHHHHHHHHHHHHHHHhcCCCeEEEee-eeEE---EE
Confidence 000001122 234445556666776655554433 334555666666432 22 11 111 1222 22
Q ss_pred Eecccccc------cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 795 VDLRGLKN------TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 795 ~~~~~~~~------~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+++..... .......++.+.|.++|+.+.... ..+.+||+|+...|++|+++++++|+++++++.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 387 VEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP--QGDILGFAPPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp EEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS--SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33321000 000125689999999999875333 148999999999999999999999999988754
No 196
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.73 E-value=2.2e-16 Score=182.10 Aligned_cols=305 Identities=12% Similarity=0.100 Sum_probs=194.8
Q ss_pred cccHHHHHHHHHHHHHHhhCCCc---------ccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH
Q 002263 515 AQGYQEMFNNLGEWLCTITGFDS---------FSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT 584 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~~---------~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~ 584 (946)
.+|..++...+.+++++..|.+. ..+.. ++++++.. ++++.+. .++++|+++...|..+...
T Consensus 77 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~ 148 (425)
T 2r2n_A 77 SAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLC---KVFEMII-----NPGDNVLLDEPAYSGTLQS 148 (425)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHH---HHHHHHC-----CTTCEEEEESSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHH---HHHHHhC-----CCCCEEEEeCCCcHHHHHH
Confidence 46888888888888888888764 23444 44444443 3334331 2468999998877766677
Q ss_pred HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcC---------CCeEEEEE-eCC-Cccccccc--CHHHHHHHHHHcCCEE
Q 002263 585 AAMCGMKIVSVGTDAKGNINIEELRKAAEANR---------DNLSTLMV-TYP-STHGVYEE--GIDEICKIIHDNGGQV 651 (946)
Q Consensus 585 a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~---------~~t~~vvv-t~P-n~~G~~~~--~i~~I~~ia~~~g~ll 651 (946)
+...|.+++.+|.+++| +|+++|+++++++. +++++|++ .+| |.+|.+.+ .+++|+++|++||+++
T Consensus 149 ~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~l 227 (425)
T 2r2n_A 149 LHPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227 (425)
T ss_dssp HGGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 88899999999987665 89999999997422 46777766 466 56888862 3669999999999999
Q ss_pred EEeccccc-cccccc--CCCc---cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCC
Q 002263 652 YMDGANMN-AQVGLT--SPGY---IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 725 (946)
Q Consensus 652 ~vD~a~~~-a~~gl~--~pg~---~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~ 725 (946)
++|+++.. .+.+-. +... .+.++++.+++|+|+ .|.++|++++++++.+.+....
T Consensus 228 i~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-----~GlRiG~~~~~~~l~~~l~~~~-------------- 288 (425)
T 2r2n_A 228 IEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-----SGLRIGFLTGPKPLIERVILHI-------------- 288 (425)
T ss_dssp EEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-----STTCCEEEEEEHHHHHHHHHHH--------------
T ss_pred EEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-----CccceEEEecCHHHHHHHHHHH--------------
Confidence 99998742 112211 1111 234577889999984 3567899999887655432100
Q ss_pred CCCCcccCccchhhHHHHHHHHHHHHcHh----hHHHHHHHHHHHHHHHHHHHhccC-Ce-eeccCCCceeeeEEEeccc
Q 002263 726 PLGTIAAAPWGSALILPISYTYIAMMGSK----GLTEASKIAILNANYMAKRLEKHY-PI-LFRGVNGTVAHEFIVDLRG 799 (946)
Q Consensus 726 ~~~~i~~~~~g~~~~~~~a~a~l~~lG~e----Gl~~~~~~~~~~a~~l~~~L~~~~-~v-~~~~~~~~~~~e~v~~~~~ 799 (946)
.....+.+ .....++.++|..++.+ .+++..++...+.+++.+.|++.+ .+ .+..+.+..+ +.++++.
T Consensus 289 ~~~~~~~~----~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~--~~~~~~~ 362 (425)
T 2r2n_A 289 QVSTLHPS----TFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMF--LWIKVKG 362 (425)
T ss_dssp HTTTCSSC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSE--EEEEETT
T ss_pred HHhcCCCC----HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEE--EEEEeCC
Confidence 00011111 22222334455554332 244455556677888888888742 22 1222222222 4456542
Q ss_pred ccccCCCCHHH-HHHHHHHCCcccCC-CCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 800 LKNTAGIEPED-VAKRLMDYGFHGPT-MSWP-----VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 800 ~~~~~g~~~~~-i~~~L~~~Gi~~~~-~~~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+..+ +.+.|.++|+.+.. ..|. ..+++||+++. .++++++++++.|++++++
T Consensus 363 -----~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 363 -----INDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp -----CSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 234455 68889999998632 2221 13789999984 5899999999999988765
No 197
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.73 E-value=4e-16 Score=178.29 Aligned_cols=293 Identities=16% Similarity=0.173 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCCHHHHHHcC----------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCG---------- 589 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~~~~~a~~~G---------- 589 (946)
...++++++++++|.+.+ +..++|+++...++.+++.++..+|..++++|+++ .+.|+.........|
T Consensus 82 ~~~~l~~~la~~~~~~~v-~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T 4adb_A 82 PVLRLAKKLIDATFADRV-FFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAP 160 (406)
T ss_dssp HHHHHHHHHHHHSSCSEE-EEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCS
T ss_pred HHHHHHHHHHhhCCCCeE-EEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCC
Confidence 456889999999998843 55678888887777776665555554445677754 556776666655444
Q ss_pred --CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccc-ccc--c-cCHHHHHHHHHHcCCEEEEecccccccc
Q 002263 590 --MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STH-GVY--E-EGIDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 590 --~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~-G~~--~-~~i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
.++..+|. .|+++|+++++ +++++|+++ | |.+ |++ . .++++|.++|++||+++++|+++. .++
T Consensus 161 ~~~~~~~~~~-----~d~~~l~~~l~---~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~ 230 (406)
T 4adb_A 161 LPADIRHAAY-----NDINSASALID---DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVG 230 (406)
T ss_dssp CCSSEEEECT-----TCHHHHHTTCS---TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTT
T ss_pred CCCCceEeCC-----CcHHHHHHHhc---CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCC
Confidence 35555654 48999999986 789999998 7 344 433 1 269999999999999999999864 221
Q ss_pred cccCCC-----ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 663 GLTSPG-----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 663 gl~~pg-----~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
-...+. ....|++++ +|+|+ +|.++|++++++++.+.+..... ....+. +
T Consensus 231 ~~g~~~~~~~~~~~~d~~t~--sK~~~-----~G~r~G~~~~~~~~~~~~~~~~~--------------~~~~~~----~ 285 (406)
T 4adb_A 231 RTGELYAYMHYGVTPDLLTT--AKALG-----GGFPVGALLATEECARVMTVGTH--------------GTTYGG----N 285 (406)
T ss_dssp TTSSSSHHHHHTCCCSEEEE--CGGGG-----TTSCCEEEEECHHHHHTCCTTSS--------------CCSSTT----C
T ss_pred ccchhHHHHhcCCCCCEEEe--chhhc-----CCCCeEEEEEcHHHHhhhccCCc--------------CCCCCC----C
Confidence 111111 234688866 79985 45679999999877655432100 011121 2
Q ss_pred hhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 738 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
...++++.+.+..+..+ +..++...+++++.++|++. +.+. ..+ .+.+ +.+.+.. ....+..++.
T Consensus 286 ~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~~---~~~~~~~~~~ 355 (406)
T 4adb_A 286 PLASAVAGKVLELINTP---EMLNGVKQRHDWFVERLNTINHRYGLFSEVRG-LGLL---IGCVLNA---DYAGQAKQIS 355 (406)
T ss_dssp HHHHHHHHHHHHHHSSH---HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE-ETTE---EEEEECT---TTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEE-EEEE---EEEEEeC---CcHHHHHHHH
Confidence 33334455556655443 44455667788888888764 2221 111 1111 3344431 0012678999
Q ss_pred HHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 813 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 813 ~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
++|.++|+.+...+ .+++|++++...|++|+++++++|+++++++.+
T Consensus 356 ~~l~~~gi~v~~~~---~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 356 QEAAKAGVMVLIAG---GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp HHHHHTTEECEESS---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCcEEeecC---CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999875332 589999999999999999999999999887653
No 198
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.73 E-value=3.2e-16 Score=182.07 Aligned_cols=309 Identities=19% Similarity=0.208 Sum_probs=206.9
Q ss_pred HHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC---------
Q 002263 522 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~--------- 590 (946)
..++.+.|+++++.+. -.++.++|+.++++++..+|.|+..+|.+++.+|| ...++||....++...|-
T Consensus 113 ~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~ 192 (473)
T 4e3q_A 113 TVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLP 192 (473)
T ss_dssp HHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCS
T ss_pred HHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCC
Confidence 4478889999986542 23677899999999999999998888877777777 467899998887665432
Q ss_pred --EEEEEcCC------CCCCC-------CHHHHHHHHHhcC-CCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCE
Q 002263 591 --KIVSVGTD------AKGNI-------NIEELRKAAEANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQ 650 (946)
Q Consensus 591 --~vv~v~~~------~~g~~-------D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~l 650 (946)
.++.++.. .++.. ..+++++++.+.. +++++|++..- +..|++.+ .+++|.++|++||++
T Consensus 193 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gil 272 (473)
T 4e3q_A 193 LPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIP 272 (473)
T ss_dssp CTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCC
T ss_pred CCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceE
Confidence 24444432 11221 2356667766543 45677766543 45677753 499999999999999
Q ss_pred EEEecccccccccccCCCccC--------CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCC
Q 002263 651 VYMDGANMNAQVGLTSPGYIG--------ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 722 (946)
Q Consensus 651 l~vD~a~~~a~~gl~~pg~~G--------aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~ 722 (946)
||+|.+ +.||.+.|.+. +|++++ .|.++ +|+..+|.+.+++++.+.+....-.. .
T Consensus 273 LI~DEV----~tGfGRtG~~fa~e~~gv~PDi~t~--~K~l~----gG~~Pl~av~~~~~i~~~~~~~~~~~-~------ 335 (473)
T 4e3q_A 273 VISDEV----ICGFGRTGNTWGCVTYDFTPDAIIS--SKNLT----AGFFPMGAVILGPELSKRLETAIEAI-E------ 335 (473)
T ss_dssp EEEECT----TTSSSTTSSSCHHHHTTCCCSEEEE--CGGGG----TTSSCCEEEEECHHHHHHHHHHHHHH-S------
T ss_pred EeccCc----cccCCcccchhHHHhcCCCCChHHh--ccccc----CCCCCcccccccHHHHHHhccccccc-c------
Confidence 999986 67887877642 699987 48774 45578888998887765432110000 0
Q ss_pred CCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee-eccCCCceeeeEEEecc
Q 002263 723 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL-FRGVNGTVAHEFIVDLR 798 (946)
Q Consensus 723 ~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~-~~~~~~~~~~e~v~~~~ 798 (946)
....-. .+.|+.+.++++.+.|..+-++++.+.++ ....+|.++|+++ ..+- ..|. |.. +.+++.
T Consensus 336 ---~~~hg~-T~~Gnpla~Aaala~L~~i~~~~l~~~~~---~~g~~l~~~L~~l~~~~~v~~vRG~-Gl~---~gielv 404 (473)
T 4e3q_A 336 ---EFPHGF-TASGHPVGCAIALKAIDVVMNEGLAENVR---RLAPRFEERLKHIAERPNIGEYRGI-GFM---WALEAV 404 (473)
T ss_dssp ---CCCCCC-TTTTCHHHHHHHHHHHHHHHHSSHHHHHH---HHHHHHHHHHHHHTTSTTEEEEEEE-TTE---EEEEEC
T ss_pred ---ccccCC-CCCCCcchhhhhhhhhhhhccccHHHHHH---HHHHHHHHHHHHHhcCCCeeEEeec-ceE---EEEEEe
Confidence 000001 13457778888899999998887765544 5678898888765 2221 1221 222 223321
Q ss_pred cccc-cC-----CCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 799 GLKN-TA-----GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 799 ~~~~-~~-----g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+. .. ......+.+.+.++|+.+.. .+++++++|+...|++|+|++++.|.++++++.+
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~----~g~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 405 KDKASKTPFDGNLSVSERIANTCTDLGLICRP----LGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp SBTTTTBCCCGGGCHHHHHHHHHHHTTEECEE----ETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccccccccHHHHHHHHHHHHHCCcEEEe----cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1000 00 01246789999999998753 3589999999999999999999999999988653
No 199
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.73 E-value=5.3e-16 Score=176.96 Aligned_cols=274 Identities=15% Similarity=0.113 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+|+++|.+ .+.++.+||+++++++.++ .. +||+|++++..|+++...++.+++..|++++.++..
T Consensus 60 ~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~-~~--~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 134 (389)
T 3acz_A 60 TVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAF-LQ--KGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDV 134 (389)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTT-CC--TTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCH
T ss_pred HHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHH-hC--CCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCH
Confidence 3456788999999987 4667888887776655544 23 789999999999999888876566789999998764
Q ss_pred -cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 178 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 178 -~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
++++ +++++++|++++| |.+|.+.|+++|.++||++|+++++| +..+.+....|-++|+|+++.|. |.|++|
T Consensus 135 ~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD-~~~~~~~~~~~~~~~~di~~~S~sK~~~~~--- 210 (389)
T 3acz_A 135 EKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVD-ATFTSPCFLKPLELGADIALHSVSKYINGH--- 210 (389)
T ss_dssp HHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEE-CTTTCTTTCCGGGTTCSEEEEETTTTTTCS---
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCccccccCccccCCeEEEECChhhccCC---
Confidence 4555 7889999999998 67999999999999999999999994 34444433345568999999998 777643
Q ss_pred CCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 254 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 254 GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
|++-+|++++++ ++.+++.... +...++. .++.+. +++ . +-+.+.
T Consensus 211 ~~~~~G~v~~~~~~~~~~l~~~~------------------------~~~g~~~-----~~~~~~-~~~--~--~l~~l~ 256 (389)
T 3acz_A 211 GDVIGGVSSAKTAEDIATIKFYR------------------------KDAGSLM-----APMDAF-LCA--R--GMKTLP 256 (389)
T ss_dssp SCCCCEEEEESSHHHHHHHHHHH------------------------HHHCCCC-----CHHHHH-HHH--H--HHTTHH
T ss_pred CCceeEEEEECcHHHHHHHHHHH------------------------HhcCCCC-----CHHHHH-HHH--c--CccHHH
Confidence 222248999998 7766541100 0000111 111111 111 1 112344
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEc--CC---------------CCcCeEEEecCCHHHHHHHHHHcCCeeee------
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTVEVQ--GL---------------PFFDTVKVKCADAHAIASAAYKIEMNLRV------ 389 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~~~~--~~---------------~~~~~~~i~~~~~~~v~~~L~~~GI~~~~------ 389 (946)
...++..+++..+++.|++.+.+.-+ .. .....+.|.+++..++.+.|.+.||.++.
T Consensus 257 ~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~l~~~~i~~~~~s~G~~ 336 (389)
T 3acz_A 257 IRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKSFEAAKKLMEHLKVCTLAVSLGCV 336 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSHHHHHHHHTTCSSSEEBSCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECCHHHHHHHHHhCCCcEECcCCCCc
Confidence 44566667788888888876423221 10 01234667665555666777777886533
Q ss_pred ------------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 ------------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ------------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++..++++.++++.++|.
T Consensus 337 ~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~ 387 (389)
T 3acz_A 337 DTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALE 387 (389)
T ss_dssp SCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHT
T ss_pred ccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHh
Confidence 114789999999999999999999885
No 200
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.73 E-value=4.4e-16 Score=175.94 Aligned_cols=280 Identities=16% Similarity=0.177 Sum_probs=181.3
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCC-CCCCHHHHHHcCC-------E--
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSA-HGTNPATAAMCGM-------K-- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~sa-Hg~~~~~a~~~G~-------~-- 591 (946)
..++++++++++|++...+..++|+++...++.+++.+.. ++..++++|++++.. |+.........|. .
T Consensus 72 ~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~-~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 150 (375)
T 2eh6_A 72 QEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWR-DKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPL 150 (375)
T ss_dssp HHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHH-HTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSC
T ss_pred HHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhc-cCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCC
Confidence 4578899999999842235567777777665555444431 121223788887654 6666555444332 2
Q ss_pred ---EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC----HHHHHHHHHHcCCEEEEeccccccccc
Q 002263 592 ---IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNAQVG 663 (946)
Q Consensus 592 ---vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia~~~g~ll~vD~a~~~a~~g 663 (946)
+..++. .|+++|+++++ +++++|++++| |.+|.+. + +++|.++|+++|+++++|+++. .++.
T Consensus 151 ~~~~~~~~~-----~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~-~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~ 220 (375)
T 2eh6_A 151 VPGFSYAKL-----NDIDSVYKLLD---EETAGIIIEVIQGEGGVNE-ASEDFLSKLQEICKEKDVLLIIDEVQT-GIGR 220 (375)
T ss_dssp CSSEEEECT-----TCHHHHHTTCC---TTEEEEEECSEETTTTSEE-CCHHHHHHHHHHHHHHTCEEEEECTTT-TTTT
T ss_pred CCCceeCCC-----chHHHHHHHhc---CCeEEEEEeCccCCCCCcC-CCHHHHHHHHHHHHHhCCEEEEecccc-CCCC
Confidence 444543 58999999886 68999999887 4679886 5 9999999999999999999875 1221
Q ss_pred ccC---CCccC--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchh
Q 002263 664 LTS---PGYIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 664 l~~---pg~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~ 738 (946)
... ...+| +|++++| |+|+ +|.++|++++++++.+.+.....+ ...++ +.
T Consensus 221 ~~~~~~~~~~~~~~d~~s~S--K~~~-----~g~~~G~~~~~~~~~~~~~~~~~~--------------~~~~~----~~ 275 (375)
T 2eh6_A 221 TGEFYAYQHFNLKPDVIALA--KGLG-----GGVPIGAILAREEVAQSFTPGSHG--------------STFGG----NP 275 (375)
T ss_dssp TSSSSGGGGGTCCCSEEEEC--GGGG-----TTSCCEEEEEEHHHHTTCCTTSCC--------------CSSTT----CH
T ss_pred CCcchhhhhcCCCCCEEEEc--cccc-----CCCCeEEEEEcHHHHhhhcCCCCC--------------CCCCC----CH
Confidence 111 12346 8998775 9884 467899999998776655321110 11121 12
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
....++.+.|..+. +..++...+++++.+.|++......++ .+.+ +.++++ .+..++.++|.++
T Consensus 276 ~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~~~~~~~-~g~~---~~~~~~-------~~~~~~~~~l~~~ 339 (375)
T 2eh6_A 276 LACRAGTVVVDEVE-----KLLPHVREVGNYFKEKLKELGKGKVKG-RGLM---LGLELE-------RECKDYVLKALEK 339 (375)
T ss_dssp HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHTTSSEEEE-ETTE---EEEECS-------SCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCceE-EEEE---EEEEEc-------CcHHHHHHHHHHC
Confidence 22223334444432 344556677889999998752111222 1222 445554 1357899999999
Q ss_pred CcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 819 Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
||.+.... .+.+|++++...+++|+++++++|+++
T Consensus 340 gi~~~~~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 340 GLLINCTA---GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp TEECEEET---TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEecCC---CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 99874322 478999999889999999999999865
No 201
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.73 E-value=6.1e-17 Score=185.93 Aligned_cols=268 Identities=12% Similarity=0.106 Sum_probs=173.4
Q ss_pred CCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHH
Q 002263 567 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEIC 641 (946)
Q Consensus 567 ~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~ 641 (946)
++++|+++...|..+...+...|++++.++++++ +.+|+++|+++++ +++++|++++|+ .+|.+.+ ++++|+
T Consensus 127 ~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~nptG~~~~~~~l~~i~ 203 (416)
T 1bw0_A 127 AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD---DKTKLLIVTNPSNPCGSNFSRKHVEDIV 203 (416)
T ss_dssp TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhc---cCCeEEEEeCCCCCCCcccCHHHHHHHH
Confidence 4688999988887777778899999999998654 5689999999996 678999999995 6899872 399999
Q ss_pred HHHHHcCCEEEEecccccc-ccc------ccCCCcc---CCCEEEeCCCcccccCCCCCCCcceeEEEecc--cCCCCCC
Q 002263 642 KIIHDNGGQVYMDGANMNA-QVG------LTSPGYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPS 709 (946)
Q Consensus 642 ~ia~~~g~ll~vD~a~~~a-~~g------l~~pg~~---GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lp~ 709 (946)
++|+++|+++++|+++... ..+ +.....+ +.++++.+++|+|+. .|.++|++++++. +.+.+..
T Consensus 204 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~Glr~G~~~~~~~~~~~~~~~~ 279 (416)
T 1bw0_A 204 RLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVV----PGWRLGWLLYVDPHGNGPSFLE 279 (416)
T ss_dssp HHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSC----GGGCCEEEEEECTTCSCHHHHH
T ss_pred HHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCC----CCceEEEEEeeCchhhHHHHHH
Confidence 9999999999999987531 111 1111112 224667789999853 3566899998763 4332210
Q ss_pred CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCce
Q 002263 710 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTV 789 (946)
Q Consensus 710 ~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~ 789 (946)
.. +.......+. +.....++.++|...+.+++.+..++...+++++.+.|++...+.+..+.+..
T Consensus 280 ~~-----------~~~~~~~~~~----~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 344 (416)
T 1bw0_A 280 GL-----------KRVGMLVCGP----CTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAM 344 (416)
T ss_dssp HH-----------HHHHHHHTCS----CHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTT
T ss_pred HH-----------HHHhccccCC----CcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE
Confidence 00 0000000111 12222233344444446677777777888899999999874233222222222
Q ss_pred eeeEEEecccccccCCCCHHHHHHHHH-HCCcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 790 AHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 790 ~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~~-~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+ +.++++......+.+..++.++|. ++|+.+.. ..|..++++||+++ .+++++++.++.|.+++++.
T Consensus 345 ~--~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 345 Y--LMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--RPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp E--EEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred E--EEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 1 234443100001246788999885 88998643 22333579999995 67899999999999887764
No 202
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.73 E-value=1.1e-16 Score=179.42 Aligned_cols=306 Identities=12% Similarity=0.064 Sum_probs=203.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 138 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~ 138 (946)
++.++.+ ..|+.+.+.+.+.. ..|.+ .+|..+...++++.+++++|.+..++.+++|||.+++.++.++.
T Consensus 18 l~~~~~~-~~~~~v~~a~~~~~---~~~~~-----~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~- 87 (359)
T 1svv_A 18 FVNDYSV-GMHPKILDLMARDN---MTQHA-----GYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL- 87 (359)
T ss_dssp CSCSCSS-CCCHHHHHHHHHHT---TCCCC-----STTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC-
T ss_pred ecCCCcC-CCCHHHHHHHHHHH---hhccc-----cccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh-
Confidence 3344444 45666655665422 22322 12344566778899999999888889999999988887776653
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-------ccccc-cCCC-------EeEEEEEcCCCceeecc-
Q 002263 139 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-------KDIDY-KSGD-------VCGVLVQYPGTEGEVLD- 202 (946)
Q Consensus 139 ~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-------~~l~~-i~~~-------t~~v~v~~pn~~G~i~d- 202 (946)
. +||+|++++..|+++.... .++..|++++.++. ++|++ ++++ +++|++++||.+|.+.|
T Consensus 88 ~--~gd~vl~~~~~~~~~~~~~--~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~ 163 (359)
T 1svv_A 88 R--PWEAVIATQLGHISTHETG--AIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTK 163 (359)
T ss_dssp C--TTEEEEEETTSHHHHSSTT--HHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCH
T ss_pred C--CCCEEEEcccchHHHHHHH--HHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCH
Confidence 2 7899999999999887640 02235788888765 34554 4443 89999999988999987
Q ss_pred --hHHHHHHHHhCCcEEEEEecCc---cccCCCC-CCC----ccceEEEeccccccccCCCCCCceEEEEEchhhhhcCC
Q 002263 203 --YGDFIKNAHANGVKVVMATDLL---ALTILKP-PGE----LGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMP 272 (946)
Q Consensus 203 --i~~i~~~a~~~gal~~v~a~~~---al~~l~~-~~~----~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp 272 (946)
+++|.++|+++|+++++|. .. +++.... ... .++|++++++.+++.|. +.|++++++++.+.+.
T Consensus 164 ~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~-----~~g~l~~~~~~~~~~~ 237 (359)
T 1svv_A 164 QELEDISASCKEHGLYLFLDG-ARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMF-----GEALIILNDALKPNAR 237 (359)
T ss_dssp HHHHHHHHHHHHHTCEEEEEC-TTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSS-----CEEEEECSGGGCTTHH
T ss_pred HHHHHHHHHHHHhCCEEEEEc-cchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCC-----ceEEEEEcccHHHHHH
Confidence 9999999999999999953 32 3333322 222 47899999885554432 4689999887765441
Q ss_pred CceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC
Q 002263 273 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 352 (946)
Q Consensus 273 ~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~ 352 (946)
... ...++..-.+.....++ ..++..++++++.++..++.+++.+.|+..
T Consensus 238 ~~~-------------------------~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 287 (359)
T 1svv_A 238 HLI-------------------------KQRGALMAKGWLLGIQF-----EVLMKDNLFFELGAHSNKMAAILKAGLEAC 287 (359)
T ss_dssp HHH-------------------------HHTTCCCTTTHHHHHHH-----HHHTSTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHH-------------------------hcCCcccccchhhHHHH-----HHHHhhhhHHHHHHHHHHHHHHHHHHhccC
Confidence 100 00010000000111111 234555678889999999999999999544
Q ss_pred CCEEEcCCCCcCeEEEecCCHHHHHHHHHHc-CCeeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 353 GTVEVQGLPFFDTVKVKCADAHAIASAAYKI-EMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 353 g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~-GI~~~~~---~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
| +++..+.....+.+.. ..++.++|.++ ||.+... .++.+|++++..++++|+++++++|+.
T Consensus 288 ~-~~~~~~~~~~~~~~~~--~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 353 (359)
T 1svv_A 288 G-IRLAWPSASNQLFPIL--ENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKR 353 (359)
T ss_dssp T-CCBSSCCSSSEECBEE--EHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred C-eEEccCCccceEEEEc--CHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence 6 7776432222222233 25788999988 9987332 235799999999999999999999974
No 203
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.73 E-value=2.3e-16 Score=179.61 Aligned_cols=274 Identities=14% Similarity=0.070 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+++++|.+ +..++.+||.+++.++.++ .. +||+|+++...|+++...++..++..|++++.++..
T Consensus 53 ~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~~~~~~-~~--~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~ 127 (386)
T 1cs1_A 53 TRDVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVF-LK--PGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDE 127 (386)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHH-CC--TTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCH
T ss_pred cHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHH-hC--CCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCH
Confidence 3456788999999987 3556677787776665554 23 789999999999998888776667789999998764
Q ss_pred -cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 178 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 178 -~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
++++ +++++++|++++| |.+|.+.|+++|.++|+++|+++++|. ..+.+....+.++|+|+++.|. |.|++|
T Consensus 128 ~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De-~~~~~~~~~~~~~~~di~~~s~sK~~~~~--- 203 (386)
T 1cs1_A 128 QALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDN-TFLSPALQNPLALGADLVLHSCTKYLNGH--- 203 (386)
T ss_dssp HHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEEC-TTTCTTTCCGGGGTCSEEEEETTTTTTCS---
T ss_pred HHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEEC-CCcccccCCccccCceEEEEcCcccccCC---
Confidence 4555 6678999999998 678999999999999999999999953 4444444344578999999998 777543
Q ss_pred CCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 254 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 254 GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
|++-+|++++++ ++.+.+.....+ ..++.|. ...++..++ .+.+.
T Consensus 204 ~~~~~G~~~~~~~~l~~~l~~~~~~------------------------~~~~~~~---~~~~~~~~~-------l~~~~ 249 (386)
T 1cs1_A 204 SDVVAGVVIAKDPDVVTELAWWANN------------------------IGVTGGA---FDSYLLLRG-------LRTLV 249 (386)
T ss_dssp SCCCCEEEEESSHHHHHHHHHHHHH------------------------HTCBCCH---HHHHHHHHH-------HTTHH
T ss_pred CCceeEEEEeCcHHHHHHHHHHHHh------------------------cCCCCCH---HHHHHHHhc-------ccHHH
Confidence 111238999986 666554110000 0011111 111111111 12345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEc--CC---------------CCcCeEEEecCC-HHHHHHHHHHcCCeeee-----
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTVEVQ--GL---------------PFFDTVKVKCAD-AHAIASAAYKIEMNLRV----- 389 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~~~~--~~---------------~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~----- 389 (946)
+..++..++.+++.+.|++++.+.-. .. .....+.|.+++ ..++.+.|.++||.++.
T Consensus 250 ~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~g~ 329 (386)
T 1cs1_A 250 PRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGG 329 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSEEBSCCCS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHHHHHHhCCcceEcccCCC
Confidence 55666777888888888877434321 11 013346666655 67888999899998762
Q ss_pred -------------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 -------------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 -------------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.+|+|++..+++++++++.++|.
T Consensus 330 ~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~ 381 (386)
T 1cs1_A 330 VESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFR 381 (386)
T ss_dssp SSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred cceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHH
Confidence 124789999999999999999999886
No 204
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.73 E-value=2.9e-17 Score=183.67 Aligned_cols=289 Identities=19% Similarity=0.255 Sum_probs=181.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCC-CH--HHHHHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NP--ATAAMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~-~~--~~a~~~G~~vv~v~~~ 598 (946)
..++++.+++++|.+.. +..++|++++..+ ++.+. .++++|+++...|+. +. ..+...|++++.+ .+
T Consensus 40 ~~~l~~~la~~~g~~~~-~~~~~gt~a~~~~---~~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~ 109 (347)
T 1jg8_A 40 INELERLAAETFGKEAA-LFVPSGTMGNQVS---IMAHT-----QRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG 109 (347)
T ss_dssp HHHHHHHHHHHHTCSEE-EEESCHHHHHHHH---HHHHC-----CTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE
T ss_pred HHHHHHHHHHHhCCceE-EEecCcHHHHHHH---HHHhc-----CCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC
Confidence 45788999999998754 4556676665433 33321 256899999887753 22 2467789999998 55
Q ss_pred CCCCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cc-cccc--cCHHHHHHHHHHcCCEEEEeccccc-cc--ccccCCC
Q 002263 599 AKGNINIEELRKAAEAN---RDNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ--VGLTSPG 668 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~-G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~--~gl~~pg 668 (946)
+++.+|+++|++++++. .++|++|++++|+ .+ |.+. +++++|+++|+++|+++++|+++.. +. .+. .+.
T Consensus 110 ~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~-~~~ 188 (347)
T 1jg8_A 110 KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV-PVK 188 (347)
T ss_dssp ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC-CHH
T ss_pred CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC-ChH
Confidence 67889999999999631 1279999999995 56 8874 2478999999999999999998642 11 121 222
Q ss_pred c--cCCCEEEeCCCcccccCCCCCCCcce-eEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 669 Y--IGADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 669 ~--~GaDi~~~s~hK~f~~P~g~GGPg~G-~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
. .++|++++++||+|+. | +| +++.++++.+.+.. +.. ...++... .......+.
T Consensus 189 ~~~~~~d~~~~s~sK~l~~------~-~G~~~~~~~~~~~~~~~--~~~----------~~~~~~~~----~~~~~~~~~ 245 (347)
T 1jg8_A 189 EYAGYADSVMFCLSKGLCA------P-VGSVVVGDRDFIERARK--ARK----------MLGGGMRQ----AGVLAAAGI 245 (347)
T ss_dssp HHHHTCSEEEEESSSTTCC------S-SCEEEEECHHHHHHHHH--HHH----------HHTCCCSS----THHHHHHHH
T ss_pred HhcccccEEEEecccccCC------C-ceEEEEcCHHHHHHHHH--HHH----------HcCCchhH----HHHHHHHHH
Confidence 1 3689888899999853 3 33 55556555433210 000 00001110 111111122
Q ss_pred HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 002263 746 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 824 (946)
Q Consensus 746 a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~ 824 (946)
..+..+ .+-+ ++...+++++.+.|++. +.+....+.+ +-+.++++. .+.+..++.++|.++||.+..
T Consensus 246 ~~l~~~-~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~l~~~gi~v~~ 313 (347)
T 1jg8_A 246 IALTKM-VDRL----KEDHENARFLALKLKEIGYSVNPEDVKT---NMVILRTDN----LKVNAHGFIEALRNSGVLANA 313 (347)
T ss_dssp HHHHHS-STTH----HHHHHHHHHHHHHHHHHTCBCCGGGCCS---SEEEEECTT----SSSCHHHHHHHHHHHTEECEE
T ss_pred HHHHHH-HHHH----HHHHHHHHHHHHHHHhcCceeccCCCcc---eEEEEEccc----ccCCHHHHHHHHHHCCCEEec
Confidence 222221 1222 22335678888888775 3322211112 124455541 145788999999999998753
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 825 MSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 825 ~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+ .+.+|+++....+++|+++++++|++++++
T Consensus 314 ~~---~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 314 VS---DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp EE---TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CC---CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 32 478999998888999999999999988754
No 205
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.73 E-value=1.3e-15 Score=173.27 Aligned_cols=285 Identities=14% Similarity=0.180 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHH-HHhcCCC-CCCEEEEcCC-CCCCCHHHHHHcCC-------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY-HKARGDH-HRNVCIIPVS-AHGTNPATAAMCGM------- 590 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y-~~~~G~~-~~~~Ili~~s-aHg~~~~~a~~~G~------- 590 (946)
...++++++++++|.+.+ +..++|++++..++.+++.+ +..+|.. ++++|+++.. .|+....+..+.+.
T Consensus 79 ~~~~l~~~la~~~g~~~v-~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (392)
T 3ruy_A 79 QLGPWYEKVAKLTNKEMV-LPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGF 157 (392)
T ss_dssp THHHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTC
T ss_pred HHHHHHHHHHHhcCCCEE-EEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhcccc
Confidence 356788999999996544 55678888776666655543 1223322 3568887554 45666555444322
Q ss_pred -----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC----HHHHHHHHHHcCCEEEEecccccc
Q 002263 591 -----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNA 660 (946)
Q Consensus 591 -----~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia~~~g~ll~vD~a~~~a 660 (946)
++..++.+ |+++|+++++ +++++|++++| |.+|.+. + +++|+++|++||+++++|+++. .
T Consensus 158 ~~~~~~~~~~~~~-----d~~~l~~~l~---~~~~~v~~~~~~nptG~~~-~~~~~l~~i~~l~~~~~~~li~De~~~-~ 227 (392)
T 3ruy_A 158 GPMLPGIIVIPYG-----DLEALKAAIT---PNTAAFILEPIQGEAGINI-PPAGFLKEALEVCKKENVLFVADEIQT-G 227 (392)
T ss_dssp CSCCSSEEEECTT-----CHHHHHHHCC---TTEEEEEECSSBSTTTSBC-CCTTHHHHHHHHHHTTTCEEEEECTTT-T
T ss_pred CCCCCCCeeeCcc-----cHHHHHHHhc---cCeEEEEEeCccCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEeechh-C
Confidence 35555542 8999999996 78999999998 5689987 5 9999999999999999999873 1
Q ss_pred cc--cccCC-C--ccCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 661 QV--GLTSP-G--YIGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 661 ~~--gl~~p-g--~~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
++ +-..+ . ....|++++| |+++ || .++|++++++++.+.+..... ....+.
T Consensus 228 ~~~~g~~~~~~~~~~~~d~~~~S--K~l~-----gG~~~~G~~~~~~~~~~~~~~~~~--------------~~~~~~-- 284 (392)
T 3ruy_A 228 LGRTGKVFACDWDNVTPDMYILG--KALG-----GGVFPISCAAANRDILGVFEPGSH--------------GSTFGG-- 284 (392)
T ss_dssp TTTTSSSSGGGGGTCCCSEEEEC--GGGG-----TTTSCCEEEEECHHHHTTCCTTSS--------------CCSSTT--
T ss_pred CCccccchhhhccCCCCCEEEEc--hhhh-----CChhhhEEEEECHHHHhhhccCCc--------------CCCCCC--
Confidence 21 11001 1 1346888774 9763 35 679999998877665532110 011111
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CC-eeeccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP-ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~-v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
+...++++.+.+..+..+ +..++...+++++.+.|++. .. +......+.+ +.+.++ + +..++.
T Consensus 285 --~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~---~~~~~~------~-~~~~l~ 349 (392)
T 3ruy_A 285 --NPLACAVSIAALEVLEEE---KLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLF---IGIELN------E-PARPYC 349 (392)
T ss_dssp --CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTE---EEEEES------S-CSHHHH
T ss_pred --CHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeE---EEEEEc------c-hHHHHH
Confidence 233334445555555433 34455667888999999875 22 2111111222 334443 1 567899
Q ss_pred HHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 813 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 813 ~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
++|.++|+.+...+ .+.+|++++...|++|+++++++|++++
T Consensus 350 ~~l~~~gi~v~~~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 350 EQLKAAGLLCKETH---ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp HHHHTTTEECCCBT---TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecCC---CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 99999999876432 4899999999999999999999998875
No 206
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.73 E-value=7.9e-18 Score=191.01 Aligned_cols=299 Identities=11% Similarity=0.009 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHHhhCCCc--cccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH--HHHcCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDS--FSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~--a~~~G~~v 592 (946)
..+++.+.++.+++++|.+. ..++ +.+|+.+.. ++++.+. . +++++++..+.|-+++.. ++..| ++
T Consensus 70 ~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n---~ai~~l~-~----~gd~v~~~~~~~~~~~~~~~a~~~G-~v 140 (386)
T 3qm2_A 70 FIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFA---GVPLNLL-G----DKTTADYVDAGYWAASAIKEAKKYC-AP 140 (386)
T ss_dssp ---CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHH---HHHHHHC-T----TCCEEEEEESSHHHHHHHHHHTTTS-EE
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHH---HHHHhcc-C----CCCeEEEEeCCHHHHHHHHHHHHhC-Ce
Confidence 34677889999999999963 2233 456665543 3344332 1 346666444434445443 45678 99
Q ss_pred EEEcCC--CCCC-CCHHHHHHHHHhcCCCeEEEEEeCC-Cccccc-ccCHHHHHHHHHHcCCEEEEecccccccccccCC
Q 002263 593 VSVGTD--AKGN-INIEELRKAAEANRDNLSTLMVTYP-STHGVY-EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 667 (946)
Q Consensus 593 v~v~~~--~~g~-~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~-~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p 667 (946)
+.++++ ++|. +|+++++++++ ++|++|++++- |.+|++ . ||++|+ +|++++||+++..+... ...
T Consensus 141 ~~v~~~~~~~G~~~~~~~~~~~l~---~~t~lV~~~h~et~tG~~i~-pi~~i~-----~g~~~~vDa~qs~g~~p-idv 210 (386)
T 3qm2_A 141 QIIDAKITVDGKRAVKPMREWQLS---DNAAYLHYCPNETIDGIAID-ETPDFG-----PEVVVTADFSSTILSAP-LDV 210 (386)
T ss_dssp EEEECEEEETTEEEECCGGGCCCC---TTCSCEEECSEETTTTEECC-CCCCCC-----TTCCEEEECTTTTTSSC-CCG
T ss_pred EEEecCcccCCCCCCchHHHhhcC---CCCcEEEEECCcCCcCEecC-chhhhc-----CCCEEEEEcccccCCCC-CCc
Confidence 999998 6775 88888887775 78988988875 458995 7 798886 79999999987532211 122
Q ss_pred CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC---CCCCCCCCCCcccCccchhhHHHHH
Q 002263 668 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 668 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~---~~~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
.++| +++++.||+++ | +|+|++++++++.+.++...-.. .+++ ..+....|.++.. ...+
T Consensus 211 ~~~~--~~~~s~hK~lG-P-----~G~g~l~v~~~~~~~~~~~~p~~-~~~~~~~~~~~~~gTp~v~~-----i~~l--- 273 (386)
T 3qm2_A 211 SRYG--VIYAGAQKNIG-P-----AGLTLVIVREDLLGKAHESCPSI-LDYTVLNDNDSMFNTPPTFA-----WYLS--- 273 (386)
T ss_dssp GGCS--EEEEETTTTTC-C-----TTEEEEEEEGGGCSCCCTTSCGG-GCHHHHHHC-------CCSH-----HHHH---
T ss_pred cccC--EEEEecccccC-C-----CccEEEEECHHHHhhhcccCCcH-HHHHHHhhcCCCCCCCcHHH-----HHHH---
Confidence 3454 66788999983 3 68999999988765553211000 1110 0111123444431 1112
Q ss_pred HHHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 745 YTYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 745 ~a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~~~v--~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
.+.+..+-.+ |+.++.++...+++++.++|++. .+ ....+.....+.+.|.++. .+.+ .++.+.|.++||.
T Consensus 274 ~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~----~~~~-~~~~~~L~~~gI~ 347 (386)
T 3qm2_A 274 GLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLAD----NTLD-KVFLEESFAAGLH 347 (386)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESS----GGGH-HHHHHHHHHTTEE
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCC----cccc-HHHHHHHHHCCCE
Confidence 2334444455 78888888889999999999875 22 1111111111234455431 1234 5777889999998
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 822 ~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+..-... .+++|+++...+|++|||+|+++|+++.++
T Consensus 348 ~~~g~~~-~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 348 ALKGHRV-VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp CCBCCTT-TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCC-cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 6432212 256999999999999999999999998654
No 207
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.73 E-value=2.9e-16 Score=180.03 Aligned_cols=284 Identities=16% Similarity=0.125 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~ 596 (946)
...++++.+++++|.+. .+..++|+++...+ ++.+. .++++|+++...|+.+.. .+...|++++.++
T Consensus 63 ~~~~l~~~ia~~~g~~~-~i~~~~g~~ai~~~---~~~l~-----~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 133 (404)
T 1e5e_A 63 TVSNLEGKIAFLEKTEA-CVATSSGMGAIAAT---VLTIL-----KAGDHLISDECLYGCTHALFEHALTKFGIQVDFIN 133 (404)
T ss_dssp HHHHHHHHHHHHHTCSE-EEEESSHHHHHHHH---HHHHC-----CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCc-EEEeCChHHHHHHH---HHHHh-----CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 45688999999999874 35566676555333 33321 256889999998887766 5778999999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHH-cCCEEEEecccccccccccCCCccCCCE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~-~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
.+ |+++|+++++ ++|++|++++| |.+|.+. |+++|+++|++ +|+++++|+++... .+..|.++|.|+
T Consensus 134 ~~-----d~~~l~~~i~---~~t~~v~l~~p~NptG~v~-~l~~i~~la~~~~~~~li~De~~~~~--~~~~~~~~~~di 202 (404)
T 1e5e_A 134 TA-----IPGEVKKHMK---PNTKIVYFETPANPTLKII-DMERVCKDAHSQEGVLVIADNTFCSP--MITNPVDFGVDV 202 (404)
T ss_dssp TT-----STTHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHTSTTCEEEEECTTTCT--TTCCGGGGTCSE
T ss_pred CC-----CHHHHHHhcC---CCCcEEEEECCCCCCCccc-CHHHHHHHHHhhcCCEEEEECCCchh--hhCCccccCCEE
Confidence 75 8899999996 78999999999 5789998 79999999999 99999999987422 222466789999
Q ss_pred EEeCCCcccccCCCCCCCc-ceeEEEecccCC-CCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 675 CHLNLHKTFCIPHGGGGPG-MGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg-~G~i~~~~~l~~-~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
++.++||+|+.| |.. +|++++++++.+ .+.... ......+.+ .. .+|+.+..+.
T Consensus 203 ~~~S~sK~~~~~----g~ri~G~~~~~~~~~~~~l~~~~-------------~~~~g~~~~----~~---~~~~~~~~l~ 258 (404)
T 1e5e_A 203 VVHSATKYINGH----TDVVAGLICGKADLLQQIRMVGI-------------KDITGSVIS----PH---DAWLITRGLS 258 (404)
T ss_dssp EEEETTTTTTCS----SCCCCEEEEECHHHHHHHHHTCC-------------CCCCCCCCC----HH---HHHHHHHHHT
T ss_pred EEEcCccccCCC----CCCeEEEEEECHHHHHHHHHHHH-------------HhCCCCCCC----HH---HHHHHHHhHh
Confidence 999999998533 233 389999876554 332110 000000111 11 1233333332
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCC------------ceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNG------------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~~~---v~~~~~~~------------~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
.+....++...++.++.+.|++... +.+++-.. ....-+.++++ + ...++.+.|.+
T Consensus 259 --~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~------~-~~~~~~~~l~~ 329 (404)
T 1e5e_A 259 --TLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILK------S-GFEGAKKLLDN 329 (404)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEET------T-HHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeC------C-CHHHHHHHHHh
Confidence 2333444455677777777765311 22221000 01222445543 1 13456666777
Q ss_pred CCcccCCCCCC--------------------------C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGPTMSWP--------------------------V-PGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 818 ~Gi~~~~~~~p--------------------------~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.|+..+..+|. + .+.+|+++.. +++++++++|+++++.+-
T Consensus 330 ~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~~~ 396 (404)
T 1e5e_A 330 LKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLDALL 396 (404)
T ss_dssp CSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHHHH
T ss_pred CCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHHH
Confidence 78754332211 1 4789999976 789999999998877643
No 208
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.73 E-value=3e-16 Score=177.26 Aligned_cols=322 Identities=15% Similarity=0.141 Sum_probs=205.5
Q ss_pred HHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhC-----
Q 002263 40 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTG----- 113 (946)
Q Consensus 40 e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g----- 113 (946)
++.+...+....+..+.+ ++.|..+...|+.+.+.+.+... ....|++. +| ..++++.+|++++
T Consensus 16 ~~~~~~~~~~~~g~~~i~-l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~~----~~~l~~~la~~~~~~~g~ 85 (370)
T 2z61_A 16 DILALAQKLESEGKKVIH-LEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDS-----RG----ILELREKISELYKDKYKA 85 (370)
T ss_dssp HHHHHHHHHHHTTCCCEE-CCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCT-----TC----CHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhcCCCEEE-ccCCCCCCCCCHHHHHHHHHHHHcCccCCCCC-----CC----CHHHHHHHHHHHHHHhCC
Confidence 344444444444443333 34454444346666544432110 12334332 12 1234556666664
Q ss_pred -CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec--cccccc-cCCCEeEE
Q 002263 114 -LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD--LKDIDY-KSGDVCGV 189 (946)
Q Consensus 114 -~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~--~~~l~~-i~~~t~~v 189 (946)
.++.++.+++|+|.+++.++.++. . +||+|++++..|+++...++ ..|.+++.++ +++|++ +++++++|
T Consensus 86 ~~~~~~v~~~~g~~~a~~~~~~~~~-~--~gd~vl~~~p~~~~~~~~~~----~~g~~~~~v~~d~~~l~~~l~~~~~~v 158 (370)
T 2z61_A 86 DIIPDNIIITGGSSLGLFFALSSII-D--DGDEVLIQNPCYPCYKNFIR----FLGAKPVFCDFTVESLEEALSDKTKAI 158 (370)
T ss_dssp CCCGGGEEEESSHHHHHHHHHHHHC-C--TTCEEEEESSCCTHHHHHHH----HTTCEEEEECSSHHHHHHHCCSSEEEE
T ss_pred CCChhhEEECCChHHHHHHHHHHhc-C--CCCEEEEeCCCchhHHHHHH----HcCCEEEEeCCCHHHHHHhcccCceEE
Confidence 566789999999988887776652 3 78999999999999888764 3577887764 567777 77789999
Q ss_pred EEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC----CCC----CCccceEEEecc-ccccccCCCCCCceE
Q 002263 190 LVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL----KPP----GELGADIVVGSA-QRFGVPMGYGGPHAA 259 (946)
Q Consensus 190 ~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l----~~~----~~~GaDi~v~s~-k~lg~P~~~GGP~~g 259 (946)
++.+| |.+|.+.|++ |.++|+++|+++++|. ..+.... .+. +..+.|++++|. |.|+.| |-.+|
T Consensus 159 ~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G 232 (370)
T 2z61_A 159 IINSPSNPLGEVIDRE-IYEFAYENIPYIISDE-IYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMT----GWRIG 232 (370)
T ss_dssp EEESSCTTTCCCCCHH-HHHHHHHHCSEEEEEC-TTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCG----GGCCE
T ss_pred EEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEc-chhhcccCCCCcCHHHccCCCCcEEEEecChhccCCc----cceEE
Confidence 99998 5799999999 9999999999999943 3232221 111 234789999998 776422 12379
Q ss_pred EEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHH
Q 002263 260 FLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 339 (946)
Q Consensus 260 ~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~ 339 (946)
++++++++.+.+.... . ....+.|. ....+..+++ ..++.+.++++.++..
T Consensus 233 ~~~~~~~~~~~~~~~~----------~--------------~~~~~~~~---~~~~a~~~~l--~~~~~~~~~~~~~~~~ 283 (370)
T 2z61_A 233 YVISNDEIIEAILKLQ----------Q--------------NLFISAPT---ISQYAALKAF--EKETEREINSMIKEFD 283 (370)
T ss_dssp EEECCHHHHHHHHHHH----------H--------------HHTSSSCH---HHHHHHGGGG--SHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHH----------h--------------hcccCCCH---HHHHHHHHHH--hccCHHHHHHHHHHHH
Confidence 9999988776551100 0 00011221 1111221111 1113567788889999
Q ss_pred HHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC-CHHHHHHHHH-HcCCeeeee------cCCeEEEEeccCCCHHHHHHH
Q 002263 340 GLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAIASAAY-KIEMNLRVV------DSNTVTASFDETTTLEDVDKL 411 (946)
Q Consensus 340 ~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-~~~~v~~~L~-~~GI~~~~~------~~~~lris~~~~~t~edid~l 411 (946)
++.+++.+.|+++| +++.......-+.+.++ ++.++.+.|. ++||.+... .++.+|++++ +++++++++
T Consensus 284 ~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~ 360 (370)
T 2z61_A 284 RRRRLVLKYVKDFG-WEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEG 360 (370)
T ss_dssp HHHHHHHHHHHHTT-CBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHH
Confidence 99999999999886 77653211111223455 4778999997 789988642 2578999999 699999999
Q ss_pred HHHHh
Q 002263 412 FIVFA 416 (946)
Q Consensus 412 l~~l~ 416 (946)
++.|.
T Consensus 361 ~~~l~ 365 (370)
T 2z61_A 361 LERIK 365 (370)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99886
No 209
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.73 E-value=1.3e-16 Score=185.54 Aligned_cols=305 Identities=13% Similarity=0.151 Sum_probs=193.3
Q ss_pred ccHHHHHHHHHHHHHHhhCC-Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~-~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+|..++...+.+++.+..|. +... +.+++|+++... +++.+. .++++|+++...|..+...+...|++++
T Consensus 118 ~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~---~~~~l~-----~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~ 189 (448)
T 3aow_A 118 KGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDL---IGRVFL-----NPGDIVVVEAPTYLAALQAFNFYEPQYI 189 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHH---HHHHHC-----CTTCEEEEEESCCHHHHHHHHTTCCEEE
T ss_pred CCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHH---HHHHHc-----CCCCEEEEeCCChHHHHHHHHHcCCEEE
Confidence 46555555555555555588 3333 444555555433 344331 2468899988876666666888999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHh---cCCCeEEEE-EeCC-Cccccccc--CHHHHHHHHHHcCCEEEEeccccccc-ccc-
Q 002263 594 SVGTDAKGNINIEELRKAAEA---NRDNLSTLM-VTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGL- 664 (946)
Q Consensus 594 ~v~~~~~g~~D~e~L~~~i~~---~~~~t~~vv-vt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl- 664 (946)
.+|.+++| +|+++|+++++. ...++++|+ +.+| |.+|.+.+ ++++|+++|+++|+++++|+++.... .+-
T Consensus 190 ~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~ 268 (448)
T 3aow_A 190 QIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP 268 (448)
T ss_dssp EEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCC
T ss_pred EeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC
Confidence 99998776 999999999962 114788874 5677 56888752 47899999999999999999874211 111
Q ss_pred -cCCCc---cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 665 -TSPGY---IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 665 -~~pg~---~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
..... .+.++.+.+++|+|+ | |.++|++++++++.+.+.... . ....+++ ...
T Consensus 269 ~~~~~~~~~~~~vi~~~S~SK~~~-~----GlriG~v~~~~~l~~~l~~~~--~------------~~~~~~~----~~~ 325 (448)
T 3aow_A 269 EKKIKALDNEGRVIYLGTFSKILA-P----GFRIGWMVGDPGIIRKMEIAK--Q------------STDLCTN----VFG 325 (448)
T ss_dssp CCCTGGGCTTSCEEEEEESTTTTC-G----GGCCEEEEECHHHHHHHHHHH--H------------HHHSSCC----HHH
T ss_pred CcCHHhcCCCCCEEEEccchhhcc-c----cccEEEEEeCHHHHHHHHHHH--H------------HhcCCCC----HHH
Confidence 11111 245678888999984 3 456899999887665432100 0 0011111 222
Q ss_pred HHHHHHHHHHHc-HhhHHHHHHHHHHHHHHHHHHHhccC--CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 741 LPISYTYIAMMG-SKGLTEASKIAILNANYMAKRLEKHY--PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 741 ~~~a~a~l~~lG-~eGl~~~~~~~~~~a~~l~~~L~~~~--~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
..++.++|...+ .+.+.+..+....+++++.+.|++.+ .+.+..+.+..+ +.++++ .+.+..++.++|.+
T Consensus 326 q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~--~~v~~~-----~~~~~~~l~~~l~~ 398 (448)
T 3aow_A 326 QVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMF--IWVTLP-----DGIDSKKMLERAIK 398 (448)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSE--EEEECS-----TTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEE--EEEEcC-----CCCCHHHHHHHHHH
Confidence 223334443211 23355555666678889999998742 233222222222 456664 24678899999999
Q ss_pred CCcccCC-CCC-C---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGPT-MSW-P---VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 818 ~Gi~~~~-~~~-p---~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+|+.+.. ..| + ..+++|++++. .++++|+++++.|.+++++.
T Consensus 399 ~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 399 KGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp TTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 9998632 223 1 25789999986 37899999999999988764
No 210
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.73 E-value=4.2e-16 Score=180.53 Aligned_cols=299 Identities=15% Similarity=0.154 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCCEE--
Q 002263 518 YQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKI-- 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~~v-- 592 (946)
..+...+++++++++++.. ...++.++|++++++++.+++.+. ++++|| ...+.|+....+..+.|...
T Consensus 84 ~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 157 (439)
T 3dxv_A 84 SNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKAT------GRSGVIAFAGAYHGCTVGSMAFSGHSVQA 157 (439)
T ss_dssp EEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHH------SCCEEEEETTCCCCSSHHHHCC-------
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHh------CCCEEEEECCCCCCCcHHHHhhcCCCchh
Confidence 3456778999999998543 234667888888877766655442 234455 56778898887766655432
Q ss_pred ------------EEEcCCCCCCC-----CHHHHHHHHH-hcCCCeEEEEEeCCC-cccccccC----HHHHHHHHHHcCC
Q 002263 593 ------------VSVGTDAKGNI-----NIEELRKAAE-ANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGG 649 (946)
Q Consensus 593 ------------v~v~~~~~g~~-----D~e~L~~~i~-~~~~~t~~vvvt~Pn-~~G~~~~~----i~~I~~ia~~~g~ 649 (946)
..+|.+.++.. |+++|+++++ .+.+++++|+++.++ +.|.+. + +++|+++|++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~-~~~~~l~~l~~l~~~~~~ 236 (439)
T 3dxv_A 158 DAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIV-PPDGFLRKFADICRAHGI 236 (439)
T ss_dssp ------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBC-CCTTHHHHHHHHHHHTTC
T ss_pred hccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCcc-CCHHHHHHHHHHHHHcCC
Confidence 34454333323 7999999993 333678888877664 567775 4 9999999999999
Q ss_pred EEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCC
Q 002263 650 QVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 721 (946)
Q Consensus 650 ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~ 721 (946)
++++|.++. ++.+.|. ...|++++ .|+|+ +|.++|++++++++.+.+....
T Consensus 237 ~li~DE~~~----g~g~~g~~~~~~~~~~~~di~s~--sK~~~-----~G~riG~~~~~~~~~~~~~~~~---------- 295 (439)
T 3dxv_A 237 LVVCDEVKV----GLARSGRLHCFEHEGFVPDILVL--GKGLG-----GGLPLSAVIAPAEILDCASAFA---------- 295 (439)
T ss_dssp EEEEECTTT----CTTTTSSSSGGGGTTCCCSEEEE--CGGGG-----TTSCCEEEEEEHHHHTSCSSSS----------
T ss_pred EEEEecccc----CCCcCchhhHHHhcCCCCCEEEE--cchhc-----CCcceEEEEECHHHHhhhcCCC----------
Confidence 999999864 2322221 24688755 59885 4678899999988776553210
Q ss_pred CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEe
Q 002263 722 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVD 796 (946)
Q Consensus 722 ~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~ 796 (946)
. ... + ++...++++.+.+..+..+.+. ++...+.++++++|++. +... .++ .+.+ +.++
T Consensus 296 ---~-~~t----~-~~~~~~~aa~aal~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~~~ 359 (439)
T 3dxv_A 296 ---M-QTL----H-GNPISAAAGLAVLETIDRDDLP---AMAERKGRLLRDGLSELAKRHPLIGDIRG-RGLA---CGME 359 (439)
T ss_dssp ---C-CTT----T-TCHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTE---EEEE
T ss_pred ---c-CCC----c-ccHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhCCCeEEEEE-EEEE---EEEE
Confidence 0 011 1 2333444455555555444433 34445667777777653 2221 111 1322 2233
Q ss_pred ccc---ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 797 LRG---LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 797 ~~~---~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+.. .....+.+..++.++|.++|+.+.... ..++.+||+++...|++|+++++++|+++++++.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 360 LVCDRQSREPARAETAKLIYRAYQLGLVVYYVG-MNGNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EEEETTTTEECHHHHHHHHHHHHHHTEECEEES-TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EecCccccCCCHHHHHHHHHHHHHCCcEEeecC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 210 000012236789999999999864322 1148899999999999999999999999987654
No 211
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.73 E-value=7.4e-16 Score=177.84 Aligned_cols=301 Identities=14% Similarity=0.137 Sum_probs=188.4
Q ss_pred HHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCHHHHHHcC----------
Q 002263 522 FNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCG---------- 589 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~~~a~~~G---------- 589 (946)
..++.+.++++++.+.. .+..++|++++..++.+++.|...+|. ++++||+++ +.|+....++.+.|
T Consensus 88 ~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~-~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 166 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWK 166 (429)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTC-CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGT
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCCCCCchhhhhhcCCchhhccccc
Confidence 45777889999975532 356677888776666666555443443 367788766 67887665554332
Q ss_pred ---CEEEEEcCCC------CCCCCHHHHHHHHHhcCCCeEEEEEeCC--Cccccccc---CHHHHHHHHHHcCCEEEEec
Q 002263 590 ---MKIVSVGTDA------KGNINIEELRKAAEANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDG 655 (946)
Q Consensus 590 ---~~vv~v~~~~------~g~~D~e~L~~~i~~~~~~t~~vvvt~P--n~~G~~~~---~i~~I~~ia~~~g~ll~vD~ 655 (946)
..++.++++. .+.+|+++|+++++++.+++++|+++.. |.+|++.+ .+++|+++|++||+++|+|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De 246 (429)
T 1s0a_A 167 GYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADE 246 (429)
T ss_dssp TTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 1345555532 2468999999999754457777776654 35796541 29999999999999999999
Q ss_pred ccc-cccccccCC---CccCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCc
Q 002263 656 ANM-NAQVGLTSP---GYIGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI 730 (946)
Q Consensus 656 a~~-~a~~gl~~p---g~~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i 730 (946)
++. .+..+.... .....|+++++ |+|+ || .++|++++++++.+.+.... . +.... .+..
T Consensus 247 ~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~l~-----~G~~~iG~~~~~~~~~~~l~~~~--~------~~~~~-~~t~ 310 (429)
T 1s0a_A 247 IATGFGRTGKLFACEHAEIAPDILCLG--KALT-----GGTMTLSATLTTREVAETISNGE--A------GCFMH-GPTF 310 (429)
T ss_dssp TTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGG-----TSSSCCEEEEECHHHHHHHHTST--T------SSCSC-CCTT
T ss_pred hhhCCcccchHHHhhhcCCCCCEEEec--cccc-----CCCccceEEEeCHHHHHHhhcCC--C------ccccc-CCCC
Confidence 874 111111001 12357888764 9874 46 68999999877655432110 0 00000 0111
Q ss_pred ccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--C-Cee-eccCCCceeeeEEEecccccccCCC
Q 002263 731 AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--Y-PIL-FRGVNGTVAHEFIVDLRGLKNTAGI 806 (946)
Q Consensus 731 ~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~-~v~-~~~~~~~~~~e~v~~~~~~~~~~g~ 806 (946)
+. +...++++.+.+..+.++++ .++...+.+++.++|++. + .+. ..+ .+.+ +.++++. +.
T Consensus 311 ~~----n~~~~~a~~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~---~~~~~~~-----~~ 374 (429)
T 1s0a_A 311 MG----NPLACAAANASLAILESGDW---QQQVADIEVQLREQLAPARDAEMVADVRV-LGAI---GVVETTH-----PV 374 (429)
T ss_dssp TT----CHHHHHHHHHHHHHHHTCHH---HHHHHHHHHHHHHHHGGGGGCTTEEEEEE-ETTE---EEEEESS-----CB
T ss_pred CC----CHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHhcCCCEEEEEE-eeEE---EEEEECC-----cc
Confidence 11 23333444455555544433 344556788999999774 1 221 111 1222 3455541 24
Q ss_pred CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 807 EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 807 ~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+..++.++|.++||.+... .+.+||+++..+|++|+++++++|++++++
T Consensus 375 ~~~~l~~~l~~~Gi~v~~~----~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 375 NMAALQKFFVEQGVWIRPF----GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp CHHHHHHHHHHTTEECCCB----TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred cHHHHHHHHHHCCCEEecc----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 6788999999999987532 478999999999999999999999987654
No 212
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.73 E-value=5.5e-17 Score=186.06 Aligned_cols=274 Identities=12% Similarity=0.083 Sum_probs=187.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
.|..+...++++.+++++|.+. ..++.+||.+.++++.++. ++||+|+++...|+++...++. .|.+++.+
T Consensus 100 ~g~~~~~~~l~~~la~~~g~~~--~i~~~sGt~a~~~~l~~~~---~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~~ 170 (409)
T 3kki_A 100 LQNDYDKPMIEKRLAKFTGFDE--CLLSQSGWNANVGLLQTIC---QPNTNVYIDFFAHMSLWEGARY----ANAQAHPF 170 (409)
T ss_dssp GCSTTTSCHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHC---CTTCEEEEETTSCHHHHHHHHH----TTCEEEEE
T ss_pred cCCcHHHHHHHHHHHHHhCCCe--EEEecchHHHHHHHHHHhc---CCCCEEEECCCcCHHHHHHHHH----cCCeEEEe
Confidence 3444445567789999999875 5677888877776665542 2899999999999999888753 47777776
Q ss_pred c---cccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCC---------CCccceE
Q 002263 175 D---LKDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP---------GELGADI 239 (946)
Q Consensus 175 ~---~~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~---------~~~GaDi 239 (946)
+ +++|++ +.+ ++++|++.+| |.+|.+.|+++|.++|+++|+++++| +..+.+.+... ...++||
T Consensus 171 ~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~D-e~~~~g~~g~~g~~~~~~~~~~~~~di 249 (409)
T 3kki_A 171 MHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVD-ESHSLGTHGPNGAGLLAELGLTREVHF 249 (409)
T ss_dssp CTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEE-CTTTTTTSSGGGCCHHHHHTCGGGCSE
T ss_pred cCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCccccccCCCCCcchhhcCCCCCCCE
Confidence 4 456666 543 5788999988 67999999999999999999999994 33343322111 1235799
Q ss_pred EEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 240 VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 240 ~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
+++|. |.|+.+ .|++.+++++.+.+... ...+. ...+ .+.....+..
T Consensus 250 ~~~s~sK~~~~~-------gg~v~~~~~~~~~~~~~----------~~~~~------------~~~~---~~~~~~aa~~ 297 (409)
T 3kki_A 250 MTASLAKTFAYR-------AGAIWCNNEVNRCVPFI----------SYPAI------------FSST---LLPYEAAGLE 297 (409)
T ss_dssp EEEESSSTTCSS-------CEEEEESSSGGGTHHHH----------CHHHH------------HSBC---CCHHHHHHHH
T ss_pred EEeecchhhCCC-------ceEEEECHHHHHHHHHh----------CcCcc------------ccCC---CcHHHHHHHH
Confidence 99997 887532 38898888776554100 00000 0011 1112333343
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee-----
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV----- 390 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~----- 390 (946)
+++ ..+. ..+++.++..++.++|++.|+++| +++.+. ...+.+.++. ..++.++|.++||.+...
T Consensus 298 aal--~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~~~~~~~ 370 (409)
T 3kki_A 298 TTL--EIIE--SADNRRQHLDRMARKLRIGLSQLG-LTIRSE--SQIIGLETGDERNTEKVRDYLESNGVFGSVFCRPAT 370 (409)
T ss_dssp HHH--HHHH--HCHHHHHHHHHHHHHHHHHHHTTT-CCCCCS--SSEEEEEEESHHHHHHHHHHHHHTTEECEEECTTSS
T ss_pred HHH--HHHh--cCHHHHHHHHHHHHHHHHHHHHcC-CccCCC--CCEEEEEeCCHHHHHHHHHHHHHCCceEeeeCCCCc
Confidence 443 2221 125677888899999999999997 776632 2234444443 567999999999988542
Q ss_pred --cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 --DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 --~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+|++++..+|++|+++++++|..
T Consensus 371 ~~~~~~iRi~~~~~~t~e~i~~~~~~l~~ 399 (409)
T 3kki_A 371 SKNKNIIRLSLNSDVNDEQIAKIIEVCSD 399 (409)
T ss_dssp CTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEccCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999973
No 213
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.73 E-value=2.2e-16 Score=182.18 Aligned_cols=306 Identities=13% Similarity=0.116 Sum_probs=188.4
Q ss_pred ccHHHHHHHHHHHHHHhhC----CCcccccCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH-HHcC
Q 002263 516 QGYQEMFNNLGEWLCTITG----FDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA-AMCG 589 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G----~~~~~l~~~sGa-~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a-~~~G 589 (946)
+|..++...+.+++.+.+| .+...+..++|+ ++.. ++++.+. .++++|+++...|+.+...+ ...|
T Consensus 83 ~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~---~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~~g 154 (428)
T 1iay_A 83 HGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANE---TIIFCLA-----DPGDAFLVPSPYYPAFNRDLRWRTG 154 (428)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHH---HHHHHHC-----CTTCEEEEESSCCTTHHHHTTTTTC
T ss_pred CCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHH---HHHHHhC-----CCCCeEEEccCCCcchHHHHHHhcC
Confidence 3555555555555555555 434344444444 4443 3344331 24578999998887766543 4789
Q ss_pred CEEEEEcCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCCEEEEecccccc
Q 002263 590 MKIVSVGTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNA 660 (946)
Q Consensus 590 ~~vv~v~~~~--~g~~D~e~L~~~i~~~---~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a 660 (946)
++++.+|.+. ++.+|+++|+++++++ .+++++|++++|+ .+|.+. + +++|+++|+++|+++++|+++...
T Consensus 155 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 155 VQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTL-DKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp CEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred CEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcC-CHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 9999999864 3478999999999742 3479999999996 589987 6 999999999999999999987521
Q ss_pred -ccc--ccCCCc---------cCCC--EEEeCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCC
Q 002263 661 -QVG--LTSPGY---------IGAD--VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQ 725 (946)
Q Consensus 661 -~~g--l~~pg~---------~GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~ 725 (946)
+.+ +..... +++| +++.++||+|+. .|.++|++.+ ++.+.+.+.. . .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~----~Glr~G~~~~~~~~~~~~~~~--~----------~-- 295 (428)
T 1iay_A 234 VFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGL----PGFRVGIIYSFNDDVVNCARK--M----------S-- 295 (428)
T ss_dssp CCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSC----GGGCEEEEEESCHHHHHHHHH--H----------H--
T ss_pred ccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCC----CCceEEEEEeCCHHHHHHHHH--H----------H--
Confidence 111 111011 1268 788899999853 3566899998 4555443210 0 0
Q ss_pred CCCCcccCccchhhHHHHHHHHHHHH--cHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccc
Q 002263 726 PLGTIAAAPWGSALILPISYTYIAMM--GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN 802 (946)
Q Consensus 726 ~~~~i~~~~~g~~~~~~~a~a~l~~l--G~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~ 802 (946)
.. ... +.....++.+++... ..+.+.+..++...+++++.+.|++. +.+ +.+..+ .+ +.++++....
T Consensus 296 ~~--~~~----~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~g-~~--~~~~~~~~~~ 365 (428)
T 1iay_A 296 SF--GLV----STQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKC-LKNNAG-LF--CWMDLRPLLR 365 (428)
T ss_dssp TT--SCC----CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCB-CCCSSS-SE--EEEECGGGCS
T ss_pred hc--ccC----CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCee-EE--EEEechhhcC
Confidence 00 111 111112222222211 12245566667778889999999875 433 222112 21 3466542100
Q ss_pred cCC-CCHHHHHHHHHHC-CcccCCC-CCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 803 TAG-IEPEDVAKRLMDY-GFHGPTM-SWPV--PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 803 ~~g-~~~~~i~~~L~~~-Gi~~~~~-~~p~--~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
... .+..++.++|.++ |+.+... .|.. ++++||++. ..+++++++++++|++++++
T Consensus 366 ~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 366 ESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp SSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 000 1345789999876 9986432 2321 478999998 57899999999999988654
No 214
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.72 E-value=1.4e-15 Score=170.34 Aligned_cols=298 Identities=8% Similarity=-0.008 Sum_probs=206.3
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 139 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~ 139 (946)
+.|..+...|+.+.+.+.+...- ...|.. ....++++.+|+++|.++.++.+++|+|.+++.++.++. .
T Consensus 22 ~~~~~~~~~~~~v~~a~~~~~~~---~~~y~~-------~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~ 90 (354)
T 3ly1_A 22 NFNENPLGMSPKAQAAARDAVVK---ANRYAK-------NEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYA-S 90 (354)
T ss_dssp SSCCCSSCCCHHHHHHHHHTGGG---TTSCCH-------HHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHC-C
T ss_pred cCCCCCCCCCHHHHHHHHHHHhh---CcCCCC-------CchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHh-C
Confidence 34444555777777677654332 233321 134578899999999988899999999988887776652 2
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccc-cC--CCEeEEEEEcC-CCceeecchHHHH
Q 002263 140 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KS--GDVCGVLVQYP-GTEGEVLDYGDFI 207 (946)
Q Consensus 140 ~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-i~--~~t~~v~v~~p-n~~G~i~di~~i~ 207 (946)
+||+|+++...|+++...++ ..|++++.++.+ ++++ ++ +++++|++++| |.+|.+.|++++.
T Consensus 91 --~gd~vl~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 164 (354)
T 3ly1_A 91 --LEAQLVIPELTYGDGEHFAK----IAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIE 164 (354)
T ss_dssp --TTCEEEEESSSCTHHHHHHH----HTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHH
T ss_pred --CCCeEEECCCCchHHHHHHH----HcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHH
Confidence 78999999999999887764 358888888764 3455 55 78999999998 6699999988888
Q ss_pred HHHHh--CCcEEEEEecCccccCCC----CC----CCc-cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCce
Q 002263 208 KNAHA--NGVKVVMATDLLALTILK----PP----GEL-GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 275 (946)
Q Consensus 208 ~~a~~--~gal~~v~a~~~al~~l~----~~----~~~-GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~ 275 (946)
++++. +|++++++. ..+..... .. ..+ +.+++++|. |.|+.| |..+|++++++++.+.+...
T Consensus 165 ~l~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----G~r~G~~~~~~~~~~~~~~~- 238 (354)
T 3ly1_A 165 PWIASKPANTMFIVDE-AYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMA----GMRVGYAVAHPTVIALMGRY- 238 (354)
T ss_dssp HHHHTCCTTEEEEEEC-TTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCG----GGCCEEEECCHHHHHHHGGG-
T ss_pred HHHHhCCCCeEEEEec-cHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccCh----hhhheeeecCHHHHHHHHHh-
Confidence 88887 999999953 32221111 11 123 667889887 877532 44579999988877665110
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCE
Q 002263 276 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 355 (946)
Q Consensus 276 ~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 355 (946)
++ ..+.|. ....+..+ .+...+.++++.++..++.+++++.|+++| +
T Consensus 239 ------------------------~~-~~~~~~---~~~~a~~~----~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~ 285 (354)
T 3ly1_A 239 ------------------------VA-GEKINF---SGVDAALA----SMNDSAFITYSKKSNDVSRQILLKALEDLK-L 285 (354)
T ss_dssp ------------------------TT-CSCCCH---HHHHHHHH----HTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred ------------------------cC-CCCCCH---HHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 00 012221 11212222 222336688899999999999999999886 7
Q ss_pred EEcCCCCcCeEEEecCC-HHHHHHHHHHcCCeee-ee--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 356 EVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLR-VV--DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 356 ~~~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~-~~--~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++... ...-+.+.++. ..++.+.|.++||.++ .. .++.+|+|++ +++|+++++++|..
T Consensus 286 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~ 347 (354)
T 3ly1_A 286 PYLPS-EGNFVFHQLVVPLKDYQTHMADAGVLIGRAFPPADNWCRISLG---TPQEMQWVADTMRE 347 (354)
T ss_dssp CBCCC-CSSEEEEECSSCHHHHHHHHHHTTEECCCCCTTCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred eECCC-CceEEEEECCCCHHHHHHHHHHCCEEEeecCCCCCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 76532 12235566664 8899999999999887 11 2578999976 89999999999863
No 215
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.72 E-value=3.1e-16 Score=178.87 Aligned_cols=302 Identities=15% Similarity=0.126 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHhhC--CCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEE
Q 002263 519 QEMFNNLGEWLCTITG--FDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 595 (946)
Q Consensus 519 ~~~~~el~~~la~l~G--~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v 595 (946)
.++...+.+++.+.+| .+... +.+++|+++...+ ++.+. .++++|+++...|..+...+...|.+++.+
T Consensus 69 ~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~---~~~l~-----~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~ 140 (399)
T 1c7n_A 69 EEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNA---VREFT-----KPGDGVIIITPVYYPFFMAIKNQERKIIEC 140 (399)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHH---HHHHC-----CTTCEEEECSSCCTHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH---HHHhc-----CCCCEEEEcCCCcHhHHHHHHHcCCEEEec
Confidence 3455556666666668 43333 4445555555433 33321 246889999888877777788899999999
Q ss_pred cCC-CCC--CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCCEEEEecccccc-ccc--cc
Q 002263 596 GTD-AKG--NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNA-QVG--LT 665 (946)
Q Consensus 596 ~~~-~~g--~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a-~~g--l~ 665 (946)
|.+ ++| .+|+++|++++++ +++++|++++|+ .+|.+. + +++|+++|+++|+++++|+++... ..+ ..
T Consensus 141 ~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 217 (399)
T 1c7n_A 141 ELLEKDGYYTIDFQKLEKLSKD--KNNKALLFCSPHNPVGRVW-KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHT 217 (399)
T ss_dssp CCEEETTEEECCHHHHHHHHTC--TTEEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCC
T ss_pred ccccCCCCEEEcHHHHHHHhcc--CCCcEEEEcCCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcc
Confidence 985 333 5899999999962 578999999994 689886 4 999999999999999999987421 111 11
Q ss_pred CCCc-----cCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 666 SPGY-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 666 ~pg~-----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
.... .+.++++.+++|+|+. +|.++|++++++ ++.+.+.... . ....++. +..
T Consensus 218 ~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~l~~~~--~---------~~~~~~~------~~~ 276 (399)
T 1c7n_A 218 VFQSIDEQLADKTITFTAPSKTFNI----AGMGMSNIIIKNPDIRERFTKSR--D---------ATSGMPF------TTL 276 (399)
T ss_dssp CGGGSCHHHHTTEEEEECSHHHHTC----GGGCCEEEECCCHHHHHHHHHHH--H---------HTTCCCC------CHH
T ss_pred cHHHcCccccCcEEEEEeChhhccc----cchheEEEEECCHHHHHHHHHHH--h---------hcccCCC------CHH
Confidence 1111 2445788899999853 356789999874 4554432100 0 0000011 122
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-H
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 817 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~-~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~ 817 (946)
...++.+.+. .+.+.+.+..++...+++++.+.|++ ...+.+..+.+.++ +.++++. .+.+..++.++|. +
T Consensus 277 ~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~~ 349 (399)
T 1c7n_A 277 GYKACEICYK-ECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYL--QWIDFRA----LKMDHKAMEEFMIHK 349 (399)
T ss_dssp HHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSE--EEEECGG----GCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEE--EEEEccc----CCCCHHHHHHHHHHh
Confidence 2222233333 24556777777777889999999987 32222212222221 2356642 1357889999997 6
Q ss_pred CCcccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 818 YGFHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 818 ~Gi~~~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
+||.+... .|. .++++||+++.. +++++++++.|.+++++++
T Consensus 350 ~gi~v~~g~~~~~~~~~~iRis~~~~--~~~l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 350 AQIFFDEGYIFGDGGIGFERINLAAP--SSVIQESLERLNKALKDLK 394 (399)
T ss_dssp TCCCCEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEeCccccCCCCCCeEEEEeccC--HHHHHHHHHHHHHHHHHHH
Confidence 89986432 222 357899999854 7899999999998887654
No 216
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.72 E-value=6.9e-16 Score=174.96 Aligned_cols=320 Identities=13% Similarity=0.129 Sum_probs=207.0
Q ss_pred HHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEE
Q 002263 42 IEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASL 121 (946)
Q Consensus 42 ~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl 121 (946)
.+.+.+++..+. +.+ ++.|..+...|+.+.+.+.+.-.-...|++. +| ..++++.+++++|.++.++.+
T Consensus 15 ~~~~~~~~~~~~-~i~-l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----~~----~~~l~~~la~~~~~~~~~v~~ 83 (381)
T 1v2d_A 15 FPRMSGLAQRLG-AVN-LGQGFPSNPPPPFLLEAVRRALGRQDQYAPP-----AG----LPALREALAEEFAVEPESVVV 83 (381)
T ss_dssp HHHHHHHHHHHT-CEE-CCCCSCSSCCCHHHHHHHHHHTTTSCSCCCT-----TC----CHHHHHHHHHHHTSCGGGEEE
T ss_pred HHHHHHHHhcCC-eEE-ecCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----CC----CHHHHHHHHHhcCCChhhEEE
Confidence 344444544322 222 2444444445666655555322112234322 11 346778999999998888999
Q ss_pred cccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-----------cccc-cCCCEeEE
Q 002263 122 LDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-----------DIDY-KSGDVCGV 189 (946)
Q Consensus 122 ~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-----------~l~~-i~~~t~~v 189 (946)
++|+|.+++.++.++. . +||+|+++...|+++...++ ..|++++.++.+ ++++ +++++++|
T Consensus 84 ~~g~~~a~~~~~~~~~-~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v 156 (381)
T 1v2d_A 84 TSGATEALYVLLQSLV-G--PGDEVVVLEPFFDVYLPDAF----LAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRAL 156 (381)
T ss_dssp ESSHHHHHHHHHHHHC-C--TTCEEEEEESCCTTHHHHHH----HTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEE
T ss_pred cCChHHHHHHHHHHhC-C--CCCEEEEcCCCchhHHHHHH----HcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEE
Confidence 9999988887776652 3 78999999999999887654 357777776543 4555 67789999
Q ss_pred EEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC----CCC--CccceEEEecc-ccccccCCCCCCce
Q 002263 190 LVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK----PPG--ELGADIVVGSA-QRFGVPMGYGGPHA 258 (946)
Q Consensus 190 ~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~----~~~--~~GaDi~v~s~-k~lg~P~~~GGP~~ 258 (946)
++++| |.+|.+.+ +++|+++|+++|+++++|. ..+..... +.. ..+.|++++|. |.|+.| |..+
T Consensus 157 ~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~----G~r~ 231 (381)
T 1v2d_A 157 LLNTPMNPTGLVFGERELEAIARLARAHDLFLISDE-VYDELYYGERPRRLREFAPERTFTVGSAGKRLEAT----GYRV 231 (381)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCG----GGCC
T ss_pred EECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEc-CccccccCCCCCCHHHhcCCCEEEEeechhhcCCc----ccce
Confidence 99988 66999864 8999999999999999953 32221111 111 35899999998 777532 2337
Q ss_pred EEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHh-ChhhHHHHHHH
Q 002263 259 AFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH-GPEGLKTIAQR 337 (946)
Q Consensus 259 g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~-g~~Gl~~i~~~ 337 (946)
|++++++++.+.+... + .....+.|. ....+..+++ ... ..++++++.++
T Consensus 232 G~~~~~~~~~~~~~~~--------------------~----~~~~~~~~~---~~~~a~~~~l--~~~~~~~~~~~~~~~ 282 (381)
T 1v2d_A 232 GWIVGPKEFMPRLAGM--------------------R----QWTSFSAPT---PLQAGVAEAL--KLARREGFYEALREG 282 (381)
T ss_dssp EEEECCTTTHHHHHHH--------------------H----HHHTSSCCH---HHHHHHHHHH--HHHHHTTHHHHHHHH
T ss_pred EEEEeCHHHHHHHHHH--------------------H----hhcccCCCc---HHHHHHHHHH--hCcccHHHHHHHHHH
Confidence 9999988776554100 0 000111221 1222222222 211 15678889999
Q ss_pred HHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeee--------cCCeEEEEeccCCCHHHHH
Q 002263 338 VHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV--------DSNTVTASFDETTTLEDVD 409 (946)
Q Consensus 338 ~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~--------~~~~lris~~~~~t~edid 409 (946)
..++.++|.+.|++.| +++........+.+.+++. ++.+.|.++||.+... .++.+|+|++. +++|++
T Consensus 283 ~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~-~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~ 358 (381)
T 1v2d_A 283 YRRRRDLLAGGLRAMG-LRVYVPEGTYFLMAELPGW-DAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELH 358 (381)
T ss_dssp HHHHHHHHHHHHHHTT-CCEECCSBSSEEEEECTTC-CHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHH
T ss_pred HHHHHHHHHHHHHHCC-CEecCCCcceEEEEecChH-hHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHH
Confidence 9999999999999987 8776432112344555432 2777788899988542 24689999986 899999
Q ss_pred HHHHHHhC
Q 002263 410 KLFIVFAG 417 (946)
Q Consensus 410 ~ll~~l~~ 417 (946)
++++.|..
T Consensus 359 ~~~~~l~~ 366 (381)
T 1v2d_A 359 LALERLGR 366 (381)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 217
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.72 E-value=5.8e-16 Score=178.25 Aligned_cols=357 Identities=11% Similarity=0.100 Sum_probs=210.6
Q ss_pred CHHHHHHHHHHHHcCccCcCCccccceeeecC-----CCcccccccc-----cCc-cccccCCCCcccccccHHHHHHHH
Q 002263 457 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMK-----LNATTEMMPV-----TWP-SFANIHPFAPADQAQGYQEMFNNL 525 (946)
Q Consensus 457 se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~-----~~~~~~~~~~-----~~~-~f~~~~p~~p~e~~qG~~~~~~el 525 (946)
.+..+.+.+.+++++. ..+.|+.|.+. .++.+..... ..+ .+..|. .+ .+|. .++
T Consensus 10 ~~~~~~~~~~~~~~~~-----~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp--~~---~~g~----~~l 75 (423)
T 3ez1_A 10 ALDLARQAYEAFKARG-----LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYP--GG---VAGL----PSA 75 (423)
T ss_dssp HHHHHHHHHHHHHHHT-----CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSC--SC---TTCC----HHH
T ss_pred HHHHHHHHHHHhhcCC-----ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCC--CC---CCCh----HHH
Confidence 3456778888777654 24567776655 2212222111 101 112230 22 2443 467
Q ss_pred HHHHHHhhCCCcccccCCchH-HHHHHHHHHHHHHHHh-cCCC-----CCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC
Q 002263 526 GEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKA-RGDH-----HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 598 (946)
Q Consensus 526 ~~~la~l~G~~~~~l~~~sGa-~ge~a~l~a~r~y~~~-~G~~-----~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~ 598 (946)
++.++++++.+...+..++|+ ++.. .-++++.+... +|.. .+++|+++...|..+...+...|++++.+|++
T Consensus 76 r~~ia~~~~~~~~~i~~t~G~~~al~-~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 154 (423)
T 3ez1_A 76 RALFAGYLDVKAENVLVWNNSSLELQ-GLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQ 154 (423)
T ss_dssp HHHHHHHTTSCGGGEEECSSCHHHHH-HHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHhCCChhhEEEeCCcHHHHH-HHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCC
Confidence 788899999876554444444 3432 00333333210 2200 05889999887766667788899999999998
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEe-CC-Cccccccc--CHHHHHHHH-HHcCCEEEEeccccc-ccc--cccCC---
Q 002263 599 AKGNINIEELRKAAEANRDNLSTLMVT-YP-STHGVYEE--GIDEICKII-HDNGGQVYMDGANMN-AQV--GLTSP--- 667 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~~t~~vvvt-~P-n~~G~~~~--~i~~I~~ia-~~~g~ll~vD~a~~~-a~~--gl~~p--- 667 (946)
++| +|+++|++++++ .+++++|+++ +| |.+|.+.+ ++++|+++| +++|+++++|+++.. .+. +...+
T Consensus 155 ~~g-~d~~~l~~~l~~-~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 232 (423)
T 3ez1_A 155 SDG-PDVDAVERLAGT-DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNF 232 (423)
T ss_dssp TTE-ECHHHHHHHHHS-CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCH
T ss_pred CCC-CCHHHHHHHHhh-CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcch
Confidence 776 999999999952 2689888765 56 57898862 345888999 999999999998641 111 11111
Q ss_pred -------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 668 -------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 668 -------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
+..+.++++.+++|++ ++|.++|++.+++++.+.+.... . ....+++ ...
T Consensus 233 ~~~~~~~~~~~~~i~~~S~sK~~-----~~G~r~G~~~~~~~~~~~~~~~~--~------------~~~~~~~----~~~ 289 (423)
T 3ez1_A 233 VVLARDAGYPDRAFVFASTSKIT-----FAGAGLGFVASSEDNIRWLSKYL--G------------AQSIGPN----KVE 289 (423)
T ss_dssp HHHHHHHTCTTSEEEEEESTTTS-----CSSSSCEEEEECHHHHHHHHHHH--H------------HSCSCCC----HHH
T ss_pred hhhhhccCCCCeEEEEeCchhhc-----cCCcceEEEEeCHHHHHHHHHHH--h------------hhccCCC----HHH
Confidence 1234568888999974 34788999999877665432100 0 0011111 111
Q ss_pred HHHHHHHHHH-Hc--HhhHHHHHHHHHHHHHHHHHHHhcc---CC--eeeccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 741 LPISYTYIAM-MG--SKGLTEASKIAILNANYMAKRLEKH---YP--ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 741 ~~~a~a~l~~-lG--~eGl~~~~~~~~~~a~~l~~~L~~~---~~--v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
..++..++.. .+ .+-+++..+....+.+.+.+.|.+. .. +.+..+.+..+ +.++++. .+..++.
T Consensus 290 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~--~~~~~~~------~~~~~~~ 361 (423)
T 3ez1_A 290 QARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYF--ISLDTAE------PVADRVV 361 (423)
T ss_dssp HHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSC--EEEEESS------SCHHHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEE--EEEECCC------CcHHHHH
Confidence 2222333333 12 1223333333444555555555542 11 32222222222 4456542 2678899
Q ss_pred HHHHHCCcccCC--CCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 813 KRLMDYGFHGPT--MSWP-----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 813 ~~L~~~Gi~~~~--~~~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.|.++||.+.. ..|+ ..+++||++... ++++|+++++.|.++++++..
T Consensus 362 ~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 362 KLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp HHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 999999998743 2232 358999999765 899999999999999887654
No 218
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.72 E-value=1.9e-15 Score=170.00 Aligned_cols=299 Identities=12% Similarity=0.078 Sum_probs=202.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCcc----ccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAW----YTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 134 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~----~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~l 134 (946)
++.+..+...|+.+.+.+.+...- +..|.... ..++++.+|+++|.++.++.+++|+|.+++.++.
T Consensus 31 l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~----------~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~ 100 (360)
T 3hdo_A 31 LNTNENPYPPSPEVVKAILEELGPDGAALRIYPSAS----------SQKLREVAGELYGFDPSWIIMANGSDEVLNNLIR 100 (360)
T ss_dssp CSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSS----------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCc----------hHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 345555666777776555432111 23332111 1367789999999888899999999988887776
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc---cccc-C-CCEeEEEEEcC-CCceeecchHHHHH
Q 002263 135 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---IDYK-S-GDVCGVLVQYP-GTEGEVLDYGDFIK 208 (946)
Q Consensus 135 a~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~---l~~i-~-~~t~~v~v~~p-n~~G~i~di~~i~~ 208 (946)
++. . +||+|+++...|+.+...++. .|.+++.++.++ ++++ . .++++|++.+| |.+|.+.|+++|.+
T Consensus 101 ~l~-~--~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 173 (360)
T 3hdo_A 101 AFA-A--EGEEIGYVHPSYSYYGTLAEV----QGARVRTFGLTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDE 173 (360)
T ss_dssp HHC-C--TTCEEEEESSSCTHHHHHHHH----HTCEEEEECBCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHh-C--CCCEEEEcCCChHHHHHHHHH----CCCEEEEeeCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHH
Confidence 652 2 789999999999988877653 488888887632 2221 1 23568888888 67999999999999
Q ss_pred HHHhCCcEEEEEecCccccCCCCC----CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCC
Q 002263 209 NAHANGVKVVMATDLLALTILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSS 283 (946)
Q Consensus 209 ~a~~~gal~~v~a~~~al~~l~~~----~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~ 283 (946)
+|+++|+++++|. ..+...-..+ ...+.+++++|. |.|+. +|..+|++.+++++.+.+...
T Consensus 174 l~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~--------- 239 (360)
T 3hdo_A 174 LARRCAGMLVLDE-TYAEFAESNALELVRRHENVVVTRTLSKSYSL----AGMRIGLAIARPEVIAALDKI--------- 239 (360)
T ss_dssp HHHHBSSEEEEEC-TTGGGSSCCCTHHHHHCSSEEEEEESTTTTSC----TTSCCEEEECCHHHHHHHHHH---------
T ss_pred HHHHCCCEEEEEC-ChHhhCCcchhHHhccCCCEEEEecchHhhcC----CccceeeEeeCHHHHHHHHHh---------
Confidence 9999999999953 2221111111 234566888887 87753 344579999888777655110
Q ss_pred CCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCc
Q 002263 284 GKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFF 363 (946)
Q Consensus 284 g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~ 363 (946)
+...+.|. ....+..++ +...+.++++.++..++.+++++.|+++| +++... ..
T Consensus 240 -----------------~~~~~~~~---~~~~a~~~~----l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~ 293 (360)
T 3hdo_A 240 -----------------RDHYNLDR---LAQAACVAA----LRDQAYLSECCRRIRETREWFTTELRSIG-YDVIPS-QG 293 (360)
T ss_dssp -----------------SCSCCSCH---HHHHHHHHH----HHCHHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCC-SS
T ss_pred -----------------CCCCCCCH---HHHHHHHHH----hcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEcCC-Cc
Confidence 00011111 112122222 22345678899999999999999999987 887632 12
Q ss_pred CeEEEecCC--HHHHHHHHHHcCCeeeeec----CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 364 DTVKVKCAD--AHAIASAAYKIEMNLRVVD----SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 364 ~~~~i~~~~--~~~v~~~L~~~GI~~~~~~----~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.-+.+..++ ..++.+.|.++||.++... ++.+|+|++ +++|+++++++|+.
T Consensus 294 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~ 350 (360)
T 3hdo_A 294 NYLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKE 350 (360)
T ss_dssp SEEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 234455554 7899999999999987542 478999987 99999999999973
No 219
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.72 E-value=4.2e-16 Score=177.83 Aligned_cols=275 Identities=12% Similarity=0.137 Sum_probs=191.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 95 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
+|..+...++++.+++++|.+ ++.++++||.+++.++.++. ++||+|+++...|+++...++. .|.+++.+
T Consensus 84 ~g~~~~~~~l~~~la~~~g~~--~v~~~~ggt~a~~~~~~~~~---~~gd~V~~~~p~~~~~~~~~~~----~g~~~~~v 154 (398)
T 3a2b_A 84 NGTLDIHVELEEKLSAYVGKE--AAILFSTGFQSNLGPLSCLM---GRNDYILLDERDHASIIDGSRL----SFSKVIKY 154 (398)
T ss_dssp TCCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHSS---CTTCEEEEETTCCHHHHHHHHH----SSSEEEEE
T ss_pred cCCcHHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh---CCCCEEEECCccCHHHHHHHHH----cCCceEEe
Confidence 455566677889999999975 68899999988777666552 2789999999999999887643 58888887
Q ss_pred cc---ccccc-cCC----CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC----CCCC-c----c
Q 002263 175 DL---KDIDY-KSG----DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK----PPGE-L----G 236 (946)
Q Consensus 175 ~~---~~l~~-i~~----~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~----~~~~-~----G 236 (946)
+. +++++ +++ ++++|++.+| |.+|.+.|+++|.++|+++|+++++|. ..+.+... +..+ + +
T Consensus 155 ~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T 3a2b_A 155 GHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDD-AHSLGVIGHKGAGTASHFGLNDD 233 (398)
T ss_dssp CTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEEC-TTTTTTSSGGGCCHHHHHTCGGG
T ss_pred CCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEEC-CCcccccCCCCCchHhhcCCCcC
Confidence 65 45555 543 7899998888 679999999999999999999999943 33333221 1111 2 3
Q ss_pred ceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 237 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 237 aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
+|++++|. |.|+ | || |++++++++++.+... ...+ ...++++. ....
T Consensus 234 ~di~~~s~sK~~~-~-----~G-G~~~~~~~~~~~l~~~----------~~~~------------~~~~~~~~---~~~a 281 (398)
T 3a2b_A 234 VDLIMGTFSKSLA-S-----LG-GFVAGDADVIDFLKHN----------ARSV------------MFSASMTP---ASVA 281 (398)
T ss_dssp CSEEEEESSSTTC-S-----SC-EEEEECHHHHHHHHHH----------CHHH------------HSSBCCCH---HHHH
T ss_pred CeEEEeccccccc-C-----CC-cEEEeCHHHHHHHHHh----------cccc------------eecCCCCH---HHHH
Confidence 79999998 7775 2 23 8999998877654110 0000 00111111 1111
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeeec-
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD- 391 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~- 391 (946)
+..+++ ..+ +.++++.++..++.+++.+.|+++| +++.... ...+.+.++. ..++.++|.++||.+....
T Consensus 282 ~~~~~l--~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~ 355 (398)
T 3a2b_A 282 STLKAL--EII--QNEPEHIEKLWKNTDYAKAQLLDHG-FDLGATE-SPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVS 355 (398)
T ss_dssp HHHHHH--HHH--HHCTHHHHHHHHHHHHHHHHHHHTT-CCBCSCC-SSEEEEECCCHHHHHHHHHHHHHTTEECEEECT
T ss_pred HHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHhcC-CCcCCCC-CCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCC
Confidence 222232 222 2245778888899999999999987 7765322 2345566654 6789999999999886531
Q ss_pred ------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 ------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 ------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+|++++.+++++|+++++++|..
T Consensus 356 ~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~ 387 (398)
T 3a2b_A 356 PAVPAEESLIRFSLMATHTYDQIDEAIEKMVK 387 (398)
T ss_dssp TTSCGGGCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEEeCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999973
No 220
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.72 E-value=1.6e-15 Score=172.94 Aligned_cols=285 Identities=13% Similarity=0.171 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHc----------
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMC---------- 588 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~---------- 588 (946)
+...++++++++++|.+.+ +..++|++++++++.+++.+...+| .++++||+ ..+.||....+....
T Consensus 78 ~~~~~l~~~la~~~~~~~v-~~~~gg~ea~~~al~~~~~~~~~~g-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 155 (395)
T 3nx3_A 78 ENIAAAAKNLAKASALERV-FFTNSGTESIEGAMKTARKYAFNKG-VKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFK 155 (395)
T ss_dssp HHHHHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHHHHHHHHHTT-CTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGC
T ss_pred HHHHHHHHHHHHhcCCCeE-EEeCCHHHHHHHHHHHHHHHhhccC-CCCCEEEEEcCCcCCCCHHHHhhcCCcccccccC
Confidence 4466888999999996543 5667888888777777776655555 24567775 566677776554332
Q ss_pred --CCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC---HHHHHHHHHHcCCEEEEecccccccc
Q 002263 589 --GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQV 662 (946)
Q Consensus 589 --G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~ 662 (946)
+.++..++.+ |+++|+++++ +++++|++..+ |..|.+.++ +++|+++|++||+++|+|+++.
T Consensus 156 ~~~~~~~~~~~~-----d~~~l~~~l~---~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~---- 223 (395)
T 3nx3_A 156 PLISGVKFAKYN-----DISSVEKLVN---EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQC---- 223 (395)
T ss_dssp SCCSCEEEECTT-----CHHHHHTTCC---TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT----
T ss_pred CCCCCcEEeCCC-----CHHHHHHhcc---CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc----
Confidence 2466666653 7999999986 78888888775 456777522 9999999999999999999753
Q ss_pred cccCCC--------ccCCCEEEeCCCcccccCCCCCCCcceeEEEeccc-CCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 663 GLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 663 gl~~pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
++.+.+ ....|++++ .|+|+ +|.++|++++++++ .+.+..... ....+.
T Consensus 224 ~~g~~g~~~~~~~~~~~~d~~t~--sK~~~-----~G~~~G~~~~~~~~~~~~~~~~~~--------------~~~~~~- 281 (395)
T 3nx3_A 224 GMGRSGKFFAYEHAQILPDIMTS--AKALG-----CGLSVGAFVINQKVASNSLEAGDH--------------GSTYGG- 281 (395)
T ss_dssp TTTTTSSSSGGGGGTCCCSEEEE--CGGGT-----TTSCCEEEEECHHHHHHHSCTTCC--------------SSCBSC-
T ss_pred CCCcCCcchhHHhcCCCCCEEEe--ccccc-----CCCceEEEEEchhhhhhhcCCccc--------------CCCCCC-
Confidence 222221 124688876 49884 36789999999877 554421100 011111
Q ss_pred ccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee-eccCCCceeeeEEEecccccccCCCCH
Q 002263 734 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL-FRGVNGTVAHEFIVDLRGLKNTAGIEP 808 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~-v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~ 808 (946)
+...++++.+.+..+..+.+. ++...+.++++++|++. +. +. .++ .+.+ +.+++.. ..+.
T Consensus 282 ---~~~~~~aa~aal~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~~-----~~~~ 346 (395)
T 3nx3_A 282 ---NPLVCAGVNAVFEIFKEEKIL---ENVNKLTPYLEQSLDELINEFDFCKKRKG-LGFM---QGLSLDK-----SVKV 346 (395)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTE---EEEEECT-----TSCH
T ss_pred ---CHHHHHHHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHHHHhCCCeEEEEe-EEEE---EEEEeCC-----cchH
Confidence 233344445555555444443 33445666777777653 22 11 111 1222 3445431 2367
Q ss_pred HHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 809 EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 809 ~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.++.++|.++|+.+...+ .+.+||+|+...|++|+++++++|+++++
T Consensus 347 ~~~~~~l~~~Gi~v~~~~---~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 347 AKVIQKCQENALLLISCG---ENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp HHHHHHHHHTTEECEEET---TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEecCC---CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 899999999999875332 58999999999999999999999998865
No 221
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.72 E-value=1.8e-16 Score=178.51 Aligned_cols=298 Identities=11% Similarity=0.070 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHHhhCCCc--cc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH--HHHHHcCCEE
Q 002263 518 YQEMFNNLGEWLCTITGFDS--FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKI 592 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~--~~a~~~G~~v 592 (946)
..+...++++++++++|.+. .. +.+++|+++...+ ++.+. .++++|+++...|..+. ..++..| ++
T Consensus 47 ~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~---~~~l~-----~~gd~vl~~~~~~~~~~~~~~~~~~g-~~ 117 (362)
T 2c0r_A 47 YEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMI---PMNFL-----KEGQTANYVMTGSWASKALKEAKLIG-DT 117 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHH---HHHHC-----CTTCEEEEEECSHHHHHHHHHHHHHS-CE
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHH---HHhcC-----CCCCeEEEEecCcHhHHHHHHHHHhC-Ce
Confidence 45677899999999999974 22 3445555555333 33321 24578887654333322 2356789 99
Q ss_pred EEEcCCC---CC-CCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccc-ccCHHHHHHHHHHcCCEEEEecccccccccccC
Q 002263 593 VSVGTDA---KG-NINIEELRKAAEANRDNLSTLMVTYP-STHGVY-EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS 666 (946)
Q Consensus 593 v~v~~~~---~g-~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~-~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~ 666 (946)
+.++++. .+ .+|.++++ ++ ++|++|++++| |.+|.+ . ++++| +|+++++|+++... . .
T Consensus 118 ~~v~~~~~~~~~~~~~~~~~~--i~---~~t~~v~~~~~~n~tG~~~~-~l~~i------~~~~vivD~a~~~~--~--~ 181 (362)
T 2c0r_A 118 HVAASSEASNYMTLPKLQEIQ--LQ---DNAAYLHLTSNETIEGAQFK-AFPDT------GSVPLIGDMSSDIL--S--R 181 (362)
T ss_dssp EEEEECGGGTTCSCCCGGGCC--CC---TTEEEEEEESEETTTTEECS-SCCCC------TTSCEEEECTTTTT--S--S
T ss_pred EEEecccccccccCCCHHHcc--cC---CCcCEEEEeCCcCccceecc-ccccc------CCCEEEEEChhhcc--C--C
Confidence 9998863 23 35766654 43 78999999988 578995 6 68887 89999999987532 2 1
Q ss_pred CCcc-CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q 002263 667 PGYI-GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 745 (946)
Q Consensus 667 pg~~-GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~ 745 (946)
|-.+ ..|+++.++||+|+ .+|+|++++++++.+.+....-.. .+++.. ........+. +.....++.
T Consensus 182 ~~~~~~~d~~~~s~~K~~g------~~G~G~l~~~~~~~~~l~~~~~~~-~~~~~~-~~~~~~~~t~----~~~~~~a~~ 249 (362)
T 2c0r_A 182 PFDLNQFGLVYAGAQKNLG------PSGVTVVIVREDLVAESPKHLPTM-LRYDTY-VKNNSLYNTP----PSFGIYMVN 249 (362)
T ss_dssp CCCGGGCSEEEEETTTTTC------CSSCEEEEEEGGGSSSCCTTSCGG-GCHHHH-HHTTTCSSCC----CHHHHHHHH
T ss_pred ccchhHCcEEEEecccccc------CcCcEEEEEcHHHHhhccccCchH-HhHHHH-hhccCcCCCc----hHHHHHHHH
Confidence 2111 24999999999984 245899999988776653210000 000000 0000000011 111223344
Q ss_pred HHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhcc--C-CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 746 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--Y-PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 746 a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~--~-~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
+.+..+..+ |+.+..++...+++++.++|++. + .+... +..+....+.+.++. +.+..+++++|.++||.
T Consensus 250 ~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~L~~~gi~ 323 (362)
T 2c0r_A 250 EVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVD-VDSRSDMNITFRLAS-----EELEKEFVKASEQEGFV 323 (362)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSC-GGGBCSSEEEEECSC-----HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCC-hHHcCCcEEEEEcCC-----cchHHHHHHHHHHCCCe
Confidence 555655555 68888888889999999999875 2 33211 000111224455431 23567899999999997
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 822 ~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+... .+..+.+||++...++++|+++++++|++++++
T Consensus 324 ~~~g-~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 324 GLKG-HRSVGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp SCBC-CTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred eccC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5321 122467999999888999999999999988654
No 222
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.72 E-value=4.7e-16 Score=175.51 Aligned_cols=280 Identities=11% Similarity=0.021 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc--cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN--IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~--~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~- 176 (946)
...++++.+|+++|.+ ++.++++||.+++.++.+++ .. +||+|+++...|+++...++. .|++++.+++
T Consensus 33 ~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~~~~~ 104 (375)
T 2fnu_A 33 RSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSA--DRNEIITTPISFVATANMLLE----SGYTPVFAGIK 104 (375)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCT--TSCEEEECSSSCTHHHHHHHH----TTCEEEECCBC
T ss_pred HHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccCC--CCCEEEECCCccHhHHHHHHH----CCCEEEEeccC
Confidence 3567889999999987 68899999998888877764 33 789999999999999988753 5888888764
Q ss_pred -------ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCC---CCCCccceEEEec--
Q 002263 177 -------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGS-- 243 (946)
Q Consensus 177 -------~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~---~~~~~GaDi~v~s-- 243 (946)
+++++ +++++++|++.+| +|.+.|+++|.++|+++|+++++|. .++.+... ..+.++ |+++.|
T Consensus 105 ~~~~~d~~~l~~~i~~~~~~v~~~~~--tG~~~~l~~i~~l~~~~~~~li~D~-a~~~~~~~~~~~~~~~~-~i~~~s~s 180 (375)
T 2fnu_A 105 NDGNIDELALEKLINERTKAIVSVDY--AGKSVEVESVQKLCKKHSLSFLSDS-SHALGSEYQNKKVGGFA-LASVFSFH 180 (375)
T ss_dssp TTSSBCGGGSGGGCCTTEEEEEEECG--GGCCCCHHHHHHHHHHHTCEEEEEC-TTCTTCEETTEETTSSS-SEEEEECC
T ss_pred CCCCCCHHHHHhhcCcCceEEEEeCC--cCCccCHHHHHHHHHHcCCEEEEEC-ccccCCeECCeeccccC-CeEEEeCC
Confidence 45555 7788999888887 8999999999999999999999943 33444321 133444 555444
Q ss_pred c-ccccccCCCCCCceEEEEEc--hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCcc-chHHHHHHHH
Q 002263 244 A-QRFGVPMGYGGPHAAFLATS--QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC-TAQALLANMA 319 (946)
Q Consensus 244 ~-k~lg~P~~~GGP~~g~l~~~--~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~-t~~~l~a~~a 319 (946)
+ |.| +| |.|+++++ +++.+++.....+...+. . + + +.+..+.+.. ....+.+
T Consensus 181 ~~K~~-~~------g~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~-----------~~~~~~~~~~~~~~~~~~--- 236 (375)
T 2fnu_A 181 AIKPI-TT------AEGGAVVTNDSELHEKMKLFRSHGMLKK-D-F-F-----------EGEVKSIGHNFRLNEIQS--- 236 (375)
T ss_dssp TTSSS-CC------SSCEEEEESCHHHHHHHHHHTBTTEEES-S-S-S-----------CEEESSCCCBCCCCHHHH---
T ss_pred CCCCc-cc------cCceEEEeCCHHHHHHHHHHHhcCCccc-c-c-c-----------ccccccccccCCCCHHHH---
Confidence 4 544 22 35566663 556544421110000000 0 0 1 1111121111 1122211
Q ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-----CCcCeEEEecC-----CHHHHHHHHHHcCCeeee
Q 002263 320 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-----PFFDTVKVKCA-----DAHAIASAAYKIEMNLRV 389 (946)
Q Consensus 320 a~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-----~~~~~~~i~~~-----~~~~v~~~L~~~GI~~~~ 389 (946)
++ .+...++++++.++..++++++.+.|+++.++++... .....+.+.++ ...++.+.|.++||.++.
T Consensus 237 a~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 314 (375)
T 2fnu_A 237 AL--GLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQV 314 (375)
T ss_dssp HH--HHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBC
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccc
Confidence 21 1222457888999999999999999999833888642 11122333333 367899999999998762
Q ss_pred ec-------------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 VD-------------------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ~~-------------------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.. .+.+|++++.++|++|+++++++|..
T Consensus 315 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 367 (375)
T 2fnu_A 315 HYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLK 367 (375)
T ss_dssp CCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 10 15799999999999999999999963
No 223
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.72 E-value=1.2e-16 Score=184.88 Aligned_cols=282 Identities=16% Similarity=0.170 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v 595 (946)
....++++.+++++|.+. .+..++|+++... +++.+. .++++||++...|+.... .+...|++++.+
T Consensus 114 ~~~~~l~~~lA~l~g~~~-~v~~~sG~~Ai~~---al~~l~-----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v 184 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAES-TLLMASGMCASTV---MLLALV-----PAGGHIVTTTDCYRKTRIFIETILPKMGITATVI 184 (445)
T ss_dssp HHHHHHHHHHHHHHTCSE-EEEESCHHHHHHH---HHHHHS-----CSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE
T ss_pred hHHHHHHHHHHHHhCCCc-EEEeCCHHHHHHH---HHHHHh-----CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence 456789999999999874 4556777755543 333321 246889998877765443 245689999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCe-EEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCC
Q 002263 596 GTDAKGNINIEELRKAAEANRDNL-STLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t-~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
+.+ |+++|+++++ ++| ++|++++|+ .+|.+. |+++|+++||++|+++++|+++... .+..|..+|+|
T Consensus 185 ~~~-----d~~~l~~ai~---~~tv~lV~le~p~NptG~v~-dl~~I~~la~~~g~~livD~a~~~~--~~~~~~~~g~D 253 (445)
T 1qgn_A 185 DPA-----DVGALELALN---QKKVNLFFTESPTNPFLRCV-DIELVSKLCHEKGALVCIDGTFATP--LNQKALALGAD 253 (445)
T ss_dssp CSS-----CHHHHHHHHH---HSCEEEEEEESSCTTTCCCC-CHHHHHHHHHHTTCEEEEECTTTCT--TTCCTTTTTCS
T ss_pred CCC-----CHHHHHHHhc---cCCCCEEEEeCCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCccc--ccCCccccCCE
Confidence 874 8999999998 678 999999994 789998 8999999999999999999987532 23456678999
Q ss_pred EEEeCCCcccccCCCCCCCc---ceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 674 VCHLNLHKTFCIPHGGGGPG---MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg---~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
+++.|+||+|+ |+| +|++++++++.+.+.... . ..+. +.+ . ..+|..+
T Consensus 254 iv~~S~sK~~g------g~gd~~~G~l~~~~~l~~~l~~~~--~-----------~~g~-~~~----~---~~a~~~~-- 304 (445)
T 1qgn_A 254 LVLHSATKFLG------GHNDVLAGCISGPLKLVSEIRNLH--H-----------ILGG-ALN----P---NAAYLII-- 304 (445)
T ss_dssp EEEECTTTTTT------CSSSCCCEEEEECHHHHHHHHHHH--H-----------HHCC-CCC----H---HHHHHHH--
T ss_pred EEEECCccccc------ccccceEEEEEECHHHHHHHHHHH--H-----------HhCC-CCC----H---HHHHHHH--
Confidence 99999999884 344 889999876654432100 0 0000 001 1 1123222
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCC------------ceeeeEEEecccccccCC-CCHHHHHHH
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNG------------TVAHEFIVDLRGLKNTAG-IEPEDVAKR 814 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~~~---v~~~~~~~------------~~~~e~v~~~~~~~~~~g-~~~~~i~~~ 814 (946)
.+-+.+....++..+++.++.+.|+++.. +.+++... ...+.+.|.++. + .+...+.+.
T Consensus 305 ~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~-----~~~~~~~~l~~ 379 (445)
T 1qgn_A 305 RGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG-----DLLTTAKFVDA 379 (445)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS-----CHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECC-----CHHHHHHHHHh
Confidence 23344555556677889999999987632 33332100 012234455431 1 123445555
Q ss_pred HHHCCccc--CCC-C--------------------CCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 815 LMDYGFHG--PTM-S--------------------WPV-PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 815 L~~~Gi~~--~~~-~--------------------~p~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
|...++.+ +.. + ..+ .+.+|+++. .||+|+++++|+++++.
T Consensus 380 l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 380 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp CSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred CCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 54234432 110 0 011 378999997 45899999999988764
No 224
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.72 E-value=3.2e-16 Score=179.22 Aligned_cols=285 Identities=16% Similarity=0.153 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH----HHcCCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a----~~~G~~vv~v 595 (946)
....++++.+++++|.+. .+..++|+++...++ +.+. .++++|+++...|+.+...+ ...|++++.+
T Consensus 65 ~~~~~l~~~la~~~g~~~-~i~~~sG~~a~~~~l---~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 135 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGEA-GLALASGMGAITSTL---WTLL-----RPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV 135 (398)
T ss_dssp HHHHHHHHHHHHHHTCSE-EEEESSHHHHHHHHH---HHHC-----CTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE
T ss_pred hHHHHHHHHHHHHhCCCc-EEEECCHHHHHHHHH---HHHh-----cCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE
Confidence 456788999999999884 456677776554443 3321 24678999988887766554 6789999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
+.+ |+++|+++++ +++++|++++|+ .+|.+. |+++|+++|+++|+++++|+++... .+..+..+|+|+
T Consensus 136 ~~~-----d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~D~~~~~~--~~~~~~~~~~d~ 204 (398)
T 1gc0_A 136 DMA-----DLQALEAAMT---PATRVIYFESPANPNMHMA-DIAGVAKIARKHGATVVVDNTYCTP--YLQRPLELGADL 204 (398)
T ss_dssp CTT-----CHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHGGGTCEEEEECTTTHH--HHCCGGGGTCSE
T ss_pred CCC-----CHHHHHHhcC---CCCeEEEEECCCCCCcccc-cHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCceE
Confidence 873 8999999996 789999999995 689998 7999999999999999999987532 233455679999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCC-CCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~-~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
++.++||+|+.| |++-.|++++++++.. .+.....+. ..+.. +.. .+|+.+..+
T Consensus 205 ~~~S~sK~~~~~---~~~~~G~l~~~~~~~~~~~~~~~~~~-----------~~~~~------~~~---~~~~~~~~l-- 259 (398)
T 1gc0_A 205 VVHSATKYLSGH---GDITAGIVVGSQALVDRIRLQGLKDM-----------TGAVL------SPH---DAALLMRGI-- 259 (398)
T ss_dssp EEEETTTTTTCS---SSCCCEEEEECHHHHHHHHHTHHHHH-----------TCCCC------CHH---HHHHHHHHH--
T ss_pred EEECCccccCCC---CCCeEEEEEEChHHHHHHHHHHhhcc-----------CCCCC------CHH---HHHHHHhcc--
Confidence 999999998532 1222488888865432 221100000 00011 111 122222222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCC------------CceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKHYP---ILFRGVN------------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~~~---v~~~~~~------------~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
+.+....++...++.++.+.|++... +.+++-. ....+.+.|+++ + ...++.+.|.+.
T Consensus 260 ~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~------~-~~~~~~~~l~~~ 332 (398)
T 1gc0_A 260 KTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELK------G-GIGAGRRFMNAL 332 (398)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEET------T-HHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEEC------C-CHHHHHHHHHhC
Confidence 23445556667788888888876311 1121100 001122344443 1 234566667777
Q ss_pred CcccCCCC------------------CC--------C-CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMS------------------WP--------V-PGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 819 Gi~~~~~~------------------~p--------~-~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
|+.....+ .| + ++.+|+++...+++++|+.|.++|+++
T Consensus 333 ~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 333 QLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp SSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 77642211 01 1 379999999999999999999998764
No 225
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.72 E-value=2.1e-16 Score=180.69 Aligned_cols=163 Identities=17% Similarity=0.194 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH----HHcCCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a----~~~G~~vv~v 595 (946)
+...++++++++++|.+. .+..++|+++...+ ++.+. .++++|+++...|+.+...+ ...|++++.+
T Consensus 64 ~~~~~l~~~la~~~g~~~-~i~~~sG~~a~~~~---l~~~~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v 134 (398)
T 2rfv_A 64 PTTDALEKKLAVLERGEA-GLATASGISAITTT---LLTLC-----QQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFV 134 (398)
T ss_dssp HHHHHHHHHHHHHHTCSE-EEEESSHHHHHHHH---HHHHC-----CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHHHhCCCc-EEEECCHHHHHHHH---HHHHh-----CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEe
Confidence 456789999999999884 45566677655443 33321 24688999998887666554 7889999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
+.+ |+++|+++++ +++++|++++| |.+|.+. |+++|+++|+++|+++++|+++.... +..+..+|.|+
T Consensus 135 ~~~-----d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~De~~~~~~--~~~~~~~~~di 203 (398)
T 2rfv_A 135 DAA-----KPEEIRAAMR---PETKVVYIETPANPTLSLV-DIETVAGIAHQQGALLVVDNTFMSPY--CQQPLQLGADI 203 (398)
T ss_dssp CTT-----SHHHHHHHCC---TTEEEEEEESSBTTTTBCC-CHHHHHHHHHHTTCEEEEECTTTCTT--TCCGGGGTCSE
T ss_pred CCC-----CHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhhCCcE
Confidence 874 8999999996 78999999999 5689998 79999999999999999999865322 23455679999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEecccCC
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP 705 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~ 705 (946)
++.++||+|+.| |++-+|++++++++.+
T Consensus 204 ~~~s~sK~~~~~---g~~~~G~~~~~~~~~~ 231 (398)
T 2rfv_A 204 VVHSVTKYINGH---GDVIGGIIVGKQEFID 231 (398)
T ss_dssp EEEETTTTTTCS---SCCCCEEEEECHHHHH
T ss_pred EEEeCcccccCC---CCceEEEEEECHHHHH
Confidence 999999998532 2222389998876553
No 226
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.72 E-value=1.3e-15 Score=177.54 Aligned_cols=304 Identities=18% Similarity=0.162 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC-------
Q 002263 520 EMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~------- 590 (946)
+...++.++++++++.+. ..++.++|++++++++.+++.|...+|..++++||+ ..++||....+....|.
T Consensus 94 ~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 173 (459)
T 4a6r_A 94 PAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQG 173 (459)
T ss_dssp HHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhcccc
Confidence 456688899999986543 236678899999888888888776777656777775 56778887766554331
Q ss_pred -----EEEEEcCCC-----CCCCC--------HHHHHHHHHhcC-CCeEEEEEeCCC-ccccccc---CHHHHHHHHHHc
Q 002263 591 -----KIVSVGTDA-----KGNIN--------IEELRKAAEANR-DNLSTLMVTYPS-THGVYEE---GIDEICKIIHDN 647 (946)
Q Consensus 591 -----~vv~v~~~~-----~g~~D--------~e~L~~~i~~~~-~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~~ 647 (946)
.+..++... +. +| +++|++++++.. +++++|+++.++ +.|++.+ .+++|+++|++|
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 252 (459)
T 4a6r_A 174 DLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY 252 (459)
T ss_dssp CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT
T ss_pred CCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc
Confidence 344454321 12 45 899999997543 456666665543 4566541 299999999999
Q ss_pred CCEEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCC--CccccCCC
Q 002263 648 GGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGG 717 (946)
Q Consensus 648 g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~--~~v~~~~d 717 (946)
|+++++|.++ .++.+.|. ...|+++++ |+++ +||.++|++++++++.+.+.. ...
T Consensus 253 ~~llI~DEv~----~g~gr~G~~~~~~~~~~~pdi~t~s--K~l~----gg~~~lg~v~~~~~i~~~~~~~~~~~----- 317 (459)
T 4a6r_A 253 DVLLVADEVI----CGFGRTGEWFGHQHFGFQPDLFTAA--KGLS----SGYLPIGAVFVGKRVAEGLIAGGDFN----- 317 (459)
T ss_dssp TCEEEEECTT----TTTTTTSSSSHHHHHTCCCSEEEEC--GGGG----TTSSCCEEEEECHHHHHHHHHHCTTH-----
T ss_pred CCEEEEeccc----cCCCcccccchHhhcCCCCCeeehh--hhhc----CCCCCccceeeCHHHHHHhhcCCCcc-----
Confidence 9999999875 33433332 236888764 8874 455789999999877655420 000
Q ss_pred CCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH-HHHHHHHHHH-hcc--CC-ee-eccCCCceee
Q 002263 718 IPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI-LNANYMAKRL-EKH--YP-IL-FRGVNGTVAH 791 (946)
Q Consensus 718 ~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~-~~a~~l~~~L-~~~--~~-v~-~~~~~~~~~~ 791 (946)
..+..+ ++...++++.+.|..+..+.+.+. .. .+.++++++| +.+ +. +. ..+ .+.+
T Consensus 318 --------~~~t~~----~~~~~~aaa~aal~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~g~~-- 379 (459)
T 4a6r_A 318 --------HGFTYS----GHPVCAAVAHANVAALRDEGIVQR---VKDDIGPYMQKRWRETFSRFEHVDDVRG-VGMV-- 379 (459)
T ss_dssp --------HHHHHC----SCHHHHHHHHHHHHHHHHTCHHHH---HHHTHHHHHHHHHHHHHTTCTTEEEEEE-ETTE--
T ss_pred --------cCCCCC----CCHHHHHHHHHHHHHHhcchHHHH---HHHHHHHHHHHHHHHHHhcCCCeEEEEE-EEEE--
Confidence 001111 234445556666766655554433 33 4455666666 322 22 11 112 1222
Q ss_pred eEEEeccccccc------CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 792 EFIVDLRGLKNT------AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 792 e~v~~~~~~~~~------~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.+++...... ......++.++|.++|+.+... ++.+||+|+...|++|+++++++|+++++++.+
T Consensus 380 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 380 -QAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC----GDHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp -EEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -EEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23333211000 0001678999999999987532 379999999999999999999999999887653
No 227
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.71 E-value=1.1e-15 Score=172.76 Aligned_cols=279 Identities=15% Similarity=0.131 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+++++|.+ ++.++++||.++++++.+++.. +||+|+++...|+++...++ ..|++++.++.
T Consensus 39 ~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~~~--~gd~v~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~ 110 (374)
T 3uwc_A 39 ELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLNIG--AGDEVITCANTFIASVGAIV----QAGATPVLVDSENG 110 (374)
T ss_dssp HHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCHHHHHHHH----HTTCEEEEECBCTT
T ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC--CCCEEEECCCccHHHHHHHH----HcCCEEEEEecCCC
Confidence 3457788999999987 5788999998888777766433 78999999999999988764 35888888765
Q ss_pred -----ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCcc--ceEEEecc---c
Q 002263 177 -----KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELG--ADIVVGSA---Q 245 (946)
Q Consensus 177 -----~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~G--aDi~v~s~---k 245 (946)
+++++ +++++++|+++ |.+|.+.|+++|.++|+++|+++++|. ..+.+.......+| +|+++.|+ |
T Consensus 111 ~~~d~~~l~~~~~~~~~~v~~~--n~~G~~~~~~~i~~~~~~~~~~li~D~-~~~~g~~~~~~~~~~~~d~~~~s~~~~K 187 (374)
T 3uwc_A 111 YVIDPEKIEAAITDKTKAIMPV--HYTGNIADMPALAKIAKKHNLHIVEDA-CQTILGRINDKFVGSWGQFACFSLHPLK 187 (374)
T ss_dssp SSBCGGGTGGGCCTTEEEECCB--CGGGCCCCHHHHHHHHHHTTCEEEEEC-TTCTTCEETTEETTSSSSEEEEECSSSS
T ss_pred CCcCHHHHHHhCCCCceEEEEe--CCcCCcCCHHHHHHHHHHcCCEEEEeC-CCccCceeCCeeccccccEEEEeCCCCC
Confidence 34555 77789888833 568999999999999999999999953 33444322222333 69999884 5
Q ss_pred cccccCCCCCCceEEEEEch-hhhhcCCCce-EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHH
Q 002263 246 RFGVPMGYGGPHAAFLATSQ-EYKRMMPGRI-VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 323 (946)
Q Consensus 246 ~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~~-~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~ 323 (946)
.|+. .+ .+|++.+++ ++.+.+.... .|... .|.. ...+.|. .... +.+++
T Consensus 188 ~l~~-~g----~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~-----------~~~~~~~-~~~~---~~aa~-- 239 (374)
T 3uwc_A 188 NLNV-WS----DAGVIITHSDEYAEKLRLYRNHGLIN------RDVC-----------VEYGINC-RMDT---IQAVI-- 239 (374)
T ss_dssp SSCC-SS----CCEEEEESCHHHHHHHHHHTBTTEEE------TTEE-----------SSCCCBC-BCCH---HHHHH--
T ss_pred cCCc-cc----eeEEEEeCCHHHHHHHHHHHhcCccc------cCcc-----------ccccccC-CCCH---HHHHH--
Confidence 5532 11 256777765 4443332110 00000 0100 0011121 1112 22232
Q ss_pred HHhChhhHHHHHHHHHHHHHHHHHHHhcCCC-EEEcCC-----CCcCeEEEecCCHHHHHHHHHHcCCeeeeec------
Q 002263 324 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGT-VEVQGL-----PFFDTVKVKCADAHAIASAAYKIEMNLRVVD------ 391 (946)
Q Consensus 324 ~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~-~~~~~~-----~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~------ 391 (946)
.+...++++++.++..++++++++.|+++++ +++... ..+..+.+...+..++.+.|.++||.++...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~ 319 (374)
T 3uwc_A 240 ANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAMHL 319 (374)
T ss_dssp HHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBCCBCSCSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCccccCCCCcccc
Confidence 2233467888999999999999999999876 776532 1123355554457889999999999775421
Q ss_pred ---------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 ---------------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 ---------------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...+|++++..+|++||++++++|..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 366 (374)
T 3uwc_A 320 QPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVRE 366 (374)
T ss_dssp SGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred ChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 16799999999999999999999963
No 228
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.71 E-value=8.3e-16 Score=175.76 Aligned_cols=276 Identities=15% Similarity=0.085 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 177 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~- 177 (946)
+...++++.+++++|.+ +..++.+||.+++.++.++. . +||+|+++...|+++...++.+++..|++++.++.+
T Consensus 64 ~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~-~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d 138 (398)
T 2rfv_A 64 PTTDALEKKLAVLERGE--AGLATASGISAITTTLLTLC-Q--QGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAK 138 (398)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC-C--TTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTS
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh-C--CCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCC
Confidence 34567889999999987 46677888877776665542 3 789999999999999988865555679999998764
Q ss_pred --cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCC
Q 002263 178 --DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 252 (946)
Q Consensus 178 --~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~ 252 (946)
++++ +++++++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+....+.++|+|+++.|. |.|++|
T Consensus 139 ~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~di~~~s~sK~~~~~-- 215 (398)
T 2rfv_A 139 PEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVD-NTFMSPYCQQPLQLGADIVVHSVTKYINGH-- 215 (398)
T ss_dssp HHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEE-CTTTCTTTCCGGGGTCSEEEEETTTTTTCS--
T ss_pred HHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEEeCcccccCC--
Confidence 4555 7789999999998 67999999999999999999999994 34454544455678999999998 777543
Q ss_pred CCCCceEEEEEchhhhh-cCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH
Q 002263 253 YGGPHAAFLATSQEYKR-MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 331 (946)
Q Consensus 253 ~GGP~~g~l~~~~~~~~-~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl 331 (946)
|+|-+|++++++++++ .+..... . . | .++.|. ...++..+++ +.+
T Consensus 216 -g~~~~G~~~~~~~~~~~~~~~~~~--------------------~-~-~-~~~~~~---~~~~~~~~~l-------~~~ 261 (398)
T 2rfv_A 216 -GDVIGGIIVGKQEFIDQARFVGLK--------------------D-I-T-GGCMSP---FNAWLTLRGV-------KTL 261 (398)
T ss_dssp -SCCCCEEEEECHHHHHHHHHTHHH--------------------H-T-T-CCCCCH---HHHHHHHHHH-------TTH
T ss_pred -CCceEEEEEECHHHHHHHHHHHHH--------------------h-C-C-CCCCCH---HHHHHHHhhh-------hhH
Confidence 2333589999987765 3311000 0 0 0 112221 1111222221 123
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEc--C---------------CCCcCeEEEecCC-HHH---HHHHHHHcCCeeee-
Q 002263 332 KTIAQRVHGLAGTFALGLKKLGTVEVQ--G---------------LPFFDTVKVKCAD-AHA---IASAAYKIEMNLRV- 389 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~g~~~~~--~---------------~~~~~~~~i~~~~-~~~---v~~~L~~~GI~~~~- 389 (946)
....++..+++.++++.|++.+.+.-+ . ......+.|.+++ ..+ +.+.+...|+.++.
T Consensus 262 ~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G 341 (398)
T 2rfv_A 262 GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLG 341 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCC
Confidence 334455566777888888775323211 1 0123346666664 223 33333233443321
Q ss_pred --------------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 --------------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 --------------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.+|+|++..++++++++++++|.
T Consensus 342 ~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 394 (398)
T 2rfv_A 342 DTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIR 394 (398)
T ss_dssp SSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred CcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 115789999999999999999999986
No 229
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.71 E-value=1.2e-15 Score=171.28 Aligned_cols=319 Identities=10% Similarity=0.040 Sum_probs=205.5
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCcccc--ccCCChhh-hhhhHHHHHHHHHHHHHHHhCCC-CcceEEcccH-HHHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYT--QYTPYQAE-IAQGRLESLLNFQTMIADLTGLP-MSNASLLDEG-TAAAEAMA 133 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t--~~~pyq~e-~sqg~l~~l~e~q~~la~L~g~~-~~~~sl~~~~-Ta~~ea~~ 133 (946)
+..|.+ ..|+.+.+.+.+...-+. ..+.|... .+.+..+...++++.+++++|.+ +.++.+++|+ |.++++++
T Consensus 7 ~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~ 84 (360)
T 1w23_A 7 FNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLP 84 (360)
T ss_dssp CCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHH
T ss_pred ecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHH
Confidence 455543 577877777765432111 11222110 14566678889999999999997 3578888888 88888777
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc--cCCCEeEEEEEcC-CCceeec
Q 002263 134 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY--KSGDVCGVLVQYP-GTEGEVL 201 (946)
Q Consensus 134 la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~--i~~~t~~v~v~~p-n~~G~i~ 201 (946)
+++....++++.|+++...|++... ++..| +++.+++ +++++ ++++|++|++.+| |.+|.+.
T Consensus 85 ~~l~~~~~~g~~vi~~~~~~~~~~~-----~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~ 158 (360)
T 1w23_A 85 MNLLTKGTIGNYVLTGSWSEKALKE-----AKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQY 158 (360)
T ss_dssp HHHCCTTCEEEEEECSHHHHHHHHH-----HHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEEC
T ss_pred HHhcCCCCcccEEEecchhHHHHHH-----HHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcceec
Confidence 6653211246778888777876322 23468 8777654 34443 5678999999987 7899997
Q ss_pred chHHHHHHHHhCCcEEEEEecCccccCCC-CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEe
Q 002263 202 DYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 279 (946)
Q Consensus 202 di~~i~~~a~~~gal~~v~a~~~al~~l~-~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s 279 (946)
| +|. +++|+++++|. ..+.+... +..++ |++++|. |.|+ | +|.|++++++++++++.... +
T Consensus 159 ~--~i~---~~~~~~li~D~-a~~~~~~~~~~~~~--di~~~s~sK~~~-~-----~G~G~~~~~~~~~~~~~~~~-~-- 221 (360)
T 1w23_A 159 Q--NFP---EINHAPLIADM-SSDILSRPLKVNQF--GMIYAGAQKNLG-P-----SGVTVVIVKKDLLNTKVEQV-P-- 221 (360)
T ss_dssp S--SCC---CCCSSCEEEEC-TTTTTSSCCCGGGC--SEEEEETTTTTS-C-----TTCEEEEEEHHHHCSCCTTC-C--
T ss_pred c--ccc---ccCCceEEEec-hhhcCCCCcCcccC--CEEEEEcccccC-C-----CCcEEEEEcHHHHhhcccCC-c--
Confidence 6 333 37999999953 34444332 12233 8999998 6654 3 34899999998887764321 1
Q ss_pred ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCE-EE
Q 002263 280 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTV-EV 357 (946)
Q Consensus 280 ~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~i~~~~~~~a~~l~~~L~~~g~~-~~ 357 (946)
+.+......+ .+...+|+|+ ....++.+++ .++..+ |++++.++..++++++.+.|+++|++ .+
T Consensus 222 --------~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~al--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 287 (360)
T 1w23_A 222 --------TMLQYATHIK-SDSLYNTPPT---FSIYMLRNVL--DWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVG 287 (360)
T ss_dssp --------GGGCHHHHHH-TTTCSSCCCH---HHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEE
T ss_pred --------chhhhhhhhh-ccCCCCCCCH---HHHHHHHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 1111000000 1122345554 2333444444 344444 78999999999999999999998644 54
Q ss_pred cC-C-CCcC-eEEEecCC---HHHHHHHHHHcCCeeeee--cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 358 QG-L-PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 358 ~~-~-~~~~-~~~i~~~~---~~~v~~~L~~~GI~~~~~--~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.. . .... .+.+.+++ ..++.+.|.++||.+... .++.+|+|++.+++++|+++++++|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~ 354 (360)
T 1w23_A 288 HAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMI 354 (360)
T ss_dssp SSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred cCCchhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 31 1 1223 46666664 567888999999987543 24789999999999999999999986
No 230
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.71 E-value=5.5e-17 Score=182.21 Aligned_cols=306 Identities=12% Similarity=0.084 Sum_probs=187.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCCc-cc-ccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDS-FS-LQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 592 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~-~~-l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~v 592 (946)
++..+...++++++++++|.+. .. +..+++ +++..++++++. .+| .+++.|+++...|.+ ...+...| ++
T Consensus 44 ~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~----~~~-~~g~~vi~~~~~~~~-~~~~~~~g-~~ 116 (360)
T 1w23_A 44 QSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLL----TKG-TIGNYVLTGSWSEKA-LKEAKLLG-ET 116 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC----CTT-CEEEEEECSHHHHHH-HHHHHTTS-EE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhc----CCC-CcccEEEecchhHHH-HHHHHHhC-Ce
Confidence 3555678899999999999862 22 333333 555543333221 223 234566666554432 22356789 99
Q ss_pred EEEcCCC-CCCCCHHHHHH-HHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCc
Q 002263 593 VSVGTDA-KGNINIEELRK-AAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 669 (946)
Q Consensus 593 v~v~~~~-~g~~D~e~L~~-~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~ 669 (946)
+.+++++ +|.+|+++|++ +++ ++|++|++++| |.+|.+.++|. +++|+++++|+++.... .+..
T Consensus 117 ~~v~~~~~~~~~d~~~l~~~~i~---~~~k~v~~~~~~nptG~~~~~i~------~~~~~~li~D~a~~~~~----~~~~ 183 (360)
T 1w23_A 117 HIAASTKANSYQSIPDFSEFQLN---ENDAYLHITSNNTIYGTQYQNFP------EINHAPLIADMSSDILS----RPLK 183 (360)
T ss_dssp EEEEECGGGTSCSCCCGGGCCCC---TTEEEEEEESEETTTTEECSSCC------CCCSSCEEEECTTTTTS----SCCC
T ss_pred EEeecccccCcCCccchHhhccC---CCCCEEEEeCCCCCcceeccccc------ccCCceEEEechhhcCC----CCcC
Confidence 9999976 67789999988 775 78999999998 57899852233 28999999999874321 2211
Q ss_pred c-CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHH
Q 002263 670 I-GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 748 (946)
Q Consensus 670 ~-GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l 748 (946)
+ ..|++++++||+|+ .+|+|++++++++.+.+.... +...++... .... ....+. +...+.++.+.+
T Consensus 184 ~~~~di~~~s~sK~~~------~~G~G~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~~~~---~~~~~~~~~~al 251 (360)
T 1w23_A 184 VNQFGMIYAGAQKNLG------PSGVTVVIVKKDLLNTKVEQV-PTMLQYATH-IKSD-SLYNTP---PTFSIYMLRNVL 251 (360)
T ss_dssp GGGCSEEEEETTTTTS------CTTCEEEEEEHHHHCSCCTTC-CGGGCHHHH-HHTT-TCSSCC---CHHHHHHHHHHH
T ss_pred cccCCEEEEEcccccC------CCCcEEEEEcHHHHhhcccCC-cchhhhhhh-hhcc-CCCCCC---CHHHHHHHHHHH
Confidence 2 23999999999884 245899999987665543211 100000000 0000 001111 111122233444
Q ss_pred HHHcHh-hHHHHHHHHHHHHHHHHHHHhccCCe-e-eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 749 AMMGSK-GLTEASKIAILNANYMAKRLEKHYPI-L-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 749 ~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~~~v-~-~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
..+..+ ++.+..++...+++++.+.|++.-.+ . +..+.......+.++++. +.+..++.++|.++|+.+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~~~~~ 326 (360)
T 1w23_A 252 DWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRN-----EELNQQFLAKAKEQGFVGLNG 326 (360)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSS-----HHHHHHHHHHHHHTTEESCBC
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCC-----CccHHHHHHHHHHCCeeeecC
Confidence 555445 67778888889999999999875212 1 100111111124556541 124578899999999986432
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 826 SWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 826 ~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
. +..+.+|+++...++++|+++++++|++++++
T Consensus 327 ~-~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 327 H-RSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp C-TTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred C-CCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 1 12478999999888999999999999988654
No 231
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.71 E-value=8.8e-16 Score=177.35 Aligned_cols=322 Identities=12% Similarity=0.063 Sum_probs=202.4
Q ss_pred cCCCCCCCCCcHHHHHHHHhCC--ccccccCCChhhhhhhHHHHHHHHHHHHHHHhC------CCCcceEEcccHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENP--AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG------LPMSNASLLDEGTAAAE 130 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~--~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g------~~~~~~sl~~~~Ta~~e 130 (946)
++.|..+...|+.+.+.+.+.. .++..|.+.+ | +.++++.+|++++ .++.++.+++|+|.+++
T Consensus 49 l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~ 119 (437)
T 3g0t_A 49 MEMGVPGLPAPQIGIETEIQKLREGVASIYPNLD-----G----LPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCF 119 (437)
T ss_dssp CCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTT-----C----CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCC-----C----hHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHH
Confidence 3455556666776655544311 2224454322 1 1245567777776 56678999999998888
Q ss_pred HHHHHhccccCCCC--EEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc-c-CCCEeEEEEEcC-CC
Q 002263 131 AMAMCNNIQKGKKK--TFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-K-SGDVCGVLVQYP-GT 196 (946)
Q Consensus 131 a~~la~~~~~~~gd--~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~-i-~~~t~~v~v~~p-n~ 196 (946)
+++.++.. .++|| +|+++...|+++...++. .|++++.+++ +++++ + ++++++|++++| |.
T Consensus 120 ~~~~~l~~-~~~gd~~~Vl~~~p~~~~~~~~~~~----~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~np 194 (437)
T 3g0t_A 120 VSFLVANR-THKNREYGTLFIDPGFNLNKLQCRI----LGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNP 194 (437)
T ss_dssp HHHHHHTT-SCTTCSCCEEEEESCCHHHHHHHHH----HTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTT
T ss_pred HHHHHHhc-CCCCCccEEEEeCCCcHhHHHHHHH----cCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCC
Confidence 77766521 02789 999999999998887754 3666666554 34555 6 678999999998 67
Q ss_pred ceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-------------CCCC-CccceEEEecc-ccccccCCCCCCce
Q 002263 197 EGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-------------KPPG-ELGADIVVGSA-QRFGVPMGYGGPHA 258 (946)
Q Consensus 197 ~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-------------~~~~-~~GaDi~v~s~-k~lg~P~~~GGP~~ 258 (946)
+|.+.+ +++|+++|+++|+++++|. ..+.... .... ..+.+++++|. |.|+.| |..+
T Consensus 195 tG~~~~~~~l~~i~~~a~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~ 269 (437)
T 3g0t_A 195 TWQCMTDEELRIIGELATKHDVIVIEDL-AYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYA----GQRI 269 (437)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCG----GGCC
T ss_pred CCCcCCHHHHHHHHHHHHHCCcEEEEEc-chhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCc----ccee
Confidence 998875 7889999999999999953 2222111 1111 26778999887 777532 3458
Q ss_pred EEEEEchhhhh-cCCCceEeEeecCCCCcceEEecccccccccccc-c-CCCccchHHHHHHHHHHHHHHhChhh---HH
Q 002263 259 AFLATSQEYKR-MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK-A-TSNICTAQALLANMAAMYAVYHGPEG---LK 332 (946)
Q Consensus 259 g~l~~~~~~~~-~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~-a-Tsni~t~~~l~a~~aa~y~~~~g~~G---l~ 332 (946)
|++++++++++ .++...-+.. +.. +. .+.+++.+ . +.+. +.....+..+++ .. +... ++
T Consensus 270 G~~~~~~~~~~~~~~~~~~~~~----~~~-~~------~~~~~~~~~~~~~~~-~~~~~~a~~~~l--~~-~~~~~~~~~ 334 (437)
T 3g0t_A 270 GVLMISGKLYEREYPDLEESFG----RLR-FG------EALSSSALYALSSGA-THSAQWGMAAML--KA-CNDGEYNFR 334 (437)
T ss_dssp EEEEECHHHHHCBCGGGHHHHS----CSB-HH------HHHHTTHHHHHHSSS-CHHHHHHHHHHH--HH-HHTTSCCHH
T ss_pred EEEEECHHHhhhhhhccccccc----ccc-hh------HHHHHHHHhhhcCCC-CHHHHHHHHHHH--hC-cHhHHHHHH
Confidence 99999988877 5321100000 000 00 00011111 1 1111 112222222222 22 1122 78
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEc------CC-CCcCeEEEecCC--HHHHHHHHHHcCCeeeeec------CCeEEE
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTVEVQ------GL-PFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------SNTVTA 397 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~~~~------~~-~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~------~~~lri 397 (946)
++.++..++.+++++.|+++| +++. .. ....-+.+.+++ ..++.++|.++||.+.... ++.+|+
T Consensus 335 ~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRi 413 (437)
T 3g0t_A 335 DSVIEYGRKARIMKKMFLDNG-FNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRI 413 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-EEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEE
Confidence 899999999999999999997 9887 12 222224445543 8899999999999886542 267999
Q ss_pred EeccCCCHHHHHHHHHHHh
Q 002263 398 SFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 398 s~~~~~t~edid~ll~~l~ 416 (946)
|++ ..+++|+++++++|+
T Consensus 414 s~~-~~~~e~i~~~~~~l~ 431 (437)
T 3g0t_A 414 CTS-LLPESQFPDLEKRLQ 431 (437)
T ss_dssp ECS-SSCGGGHHHHHHHHH
T ss_pred EEe-cCCHHHHHHHHHHHH
Confidence 999 449999999999986
No 232
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.71 E-value=4.6e-16 Score=187.95 Aligned_cols=301 Identities=15% Similarity=0.115 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 600 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~ 600 (946)
.+.++++.+++++|.+.+.+.++++++++.++++++. +++|+||++...|.+....+.+.|++++.++.+.+
T Consensus 196 ~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~--------~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~ 267 (715)
T 3n75_A 196 PHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSA--------PAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRN 267 (715)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBC
T ss_pred HHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhC--------CCCCEEEECCCccHHHHHHHHHcCCEEEEEecccc
Confidence 3779999999999999876666665677755555442 36789999999999988889999999999987543
Q ss_pred -----CCC-----CHHHHHHHHHhcCCCeE---EEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccc--cccc
Q 002263 601 -----GNI-----NIEELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ--VGLT 665 (946)
Q Consensus 601 -----g~~-----D~e~L~~~i~~~~~~t~---~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~--~gl~ 665 (946)
+.+ |+++|+++++++ ++++ ++++++||++|.+- |+++|+++|+.++ +++|+||...+ +...
T Consensus 268 ~~gi~~~i~~~~~d~e~Le~~l~~~-~~~k~p~~vivt~pn~~G~v~-dl~~I~ela~~~~--livDEAH~~~~~f~~~~ 343 (715)
T 3n75_A 268 AYGILGGIPQSEFQHATIAKRVKET-PNATWPVHAVITNSTYDGLLY-NTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (715)
T ss_dssp TTCCBCCCCGGGGSHHHHHHHHHHS-TTCCSCSEEEEESSCTTSEEE-CHHHHHHHCCCSE--EEEECTTCTTGGGSGGG
T ss_pred ccccccCcccccCCHHHHHHHHhhC-cCccCceEEEEECCCCCCccC-CHHHHHHHhCcCc--EEEccccccccccCCcc
Confidence 234 899999999864 3344 89999999999998 8999999998764 78999985322 1111
Q ss_pred C---CCccC--CCEE---EeCCCcccccCCCCCCC-cceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 666 S---PGYIG--ADVC---HLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 666 ~---pg~~G--aDi~---~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
+ +...| +|++ +.|+||+++ |+ +.|++.+++...... +... .. .. .+|++
T Consensus 344 ~~~~al~~g~~aD~vii~~~S~hKtL~------gltqgs~i~v~~~i~~~~----~~~~-------~~-~~--~STSp-- 401 (715)
T 3n75_A 344 EGKCGMSGGRVEGKVIYETQSTHKLLA------AFSQASMIHVKGDVNEET----FNEA-------YM-MH--TTTSP-- 401 (715)
T ss_dssp TTSSTTSSSCCTTCEEEEEECHHHHSS------CCTTCEEEEEESCCCHHH----HHHH-------HH-HT--SCSSC--
T ss_pred ccccccccCcCCCEEEEEEeccccccc------CCCCeeEEEeCchhhHHH----HHHH-------HH-hh--cCCCc--
Confidence 1 11223 6876 899999984 44 567888876521110 0000 00 00 01111
Q ss_pred hhhHHHHHHHHHHHHcH-hhHHHHHHHHHHHHHHHHHHHhcc--------CCeeecc-----------------------
Q 002263 737 SALILPISYTYIAMMGS-KGLTEASKIAILNANYMAKRLEKH--------YPILFRG----------------------- 784 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~-eGl~~~~~~~~~~a~~l~~~L~~~--------~~v~~~~----------------------- 784 (946)
+..+++..-+.+.++-. +| .+..++.++++++++++|+++ +.+.-+.
T Consensus 402 sy~~~AsldaA~~~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~ 480 (715)
T 3n75_A 402 HYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID 480 (715)
T ss_dssp CHHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCC
T ss_pred hHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccc
Confidence 12222222223334432 33 335567788899999998764 1221000
Q ss_pred CC----CceeeeEEEeccccc-----ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 785 VN----GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 785 ~~----~~~~~e~v~~~~~~~-----~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.. +|. .++++++.+. ...|+++..+.+.|.++||.+...+ ...+.+-+|...|++++++++++|.+
T Consensus 481 ~~~~~~Dp~--Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d---~~~vl~l~s~g~~~~~~~~L~~aL~~ 555 (715)
T 3n75_A 481 NEHMYLDPI--KVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---PYNLLFLFSIGIDKTKALSLLRALTD 555 (715)
T ss_dssp SSSEEECTT--EEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE---TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cCcccCCCe--EEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecC---CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 00 011 1334443221 0126788999999999999875433 36788888888999999999999998
Q ss_pred HHHHHH
Q 002263 856 IREEIA 861 (946)
Q Consensus 856 i~~e~~ 861 (946)
+.+...
T Consensus 556 ~~~~~~ 561 (715)
T 3n75_A 556 FKRAFD 561 (715)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 876543
No 233
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.71 E-value=6.8e-16 Score=173.97 Aligned_cols=296 Identities=13% Similarity=0.140 Sum_probs=199.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCc--cccccCCChhhhhhhHHHHHHHHHHHHHHHhCC-CCcceEEcccHHHHHHHHHHHh
Q 002263 60 GMGYYNTHVPPVILRNIMENPA--WYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~--~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~-~~~~~sl~~~~Ta~~ea~~la~ 136 (946)
+.|..+...|+.+.+.+.+.-. .+..|.+ . + ..++++.+|+++|. +..++.+++|+|.+++.++.++
T Consensus 36 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~---~----~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 105 (367)
T 3euc_A 36 DAMENPYRLPPALRSELAARLGEVALNRYPV---P---S----SEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAA 105 (367)
T ss_dssp CSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC---C---C----HHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHT
T ss_pred cCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC---C---c----HHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHH
Confidence 4444455577776655553211 1223321 1 1 34678899999999 6678989999998888776655
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCC-CEeEEEEEcC-CCceee---cc
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEV---LD 202 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~-~t~~v~v~~p-n~~G~i---~d 202 (946)
. . +||+|+++...|+.+...++ ..|.+++.++. +++++ +++ ++++|++++| |.+|.+ .+
T Consensus 106 ~-~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~ 178 (367)
T 3euc_A 106 A-R--PGAKVMAPVPGFVMYAMSAQ----FAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAAD 178 (367)
T ss_dssp C-C--TTCEEEEEESCSCCSCHHHH----TTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHH
T ss_pred c-C--CCCEEEEcCCCHHHHHHHHH----HcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHH
Confidence 2 3 78999999999988777653 46888888764 34555 555 8999999998 569998 46
Q ss_pred hHHHHHHHHhC--CcEEEEEecCcc-cc---CCCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCce
Q 002263 203 YGDFIKNAHAN--GVKVVMATDLLA-LT---ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 275 (946)
Q Consensus 203 i~~i~~~a~~~--gal~~v~a~~~a-l~---~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~ 275 (946)
+++|+++|+++ |+++++|. ..+ +. ........+.++++.|. |. +. +|..+|++.+++++.+.+...
T Consensus 179 l~~i~~~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~----~G~r~G~~~~~~~~~~~~~~~- 251 (367)
T 3euc_A 179 MEAIVRAAQGSVCRSLVVVDE-AYQPFAQESWMSRLTDFGNLLVMRTVSKL-GL----AGIRLGYVAGDPQWLEQLDKV- 251 (367)
T ss_dssp HHHHHHHTBTTSCBCEEEEEC-TTCCSSSCCSGGGGGTCTTEEEEEECCCT-TS----CSCCEEEEEECHHHHHHHGGG-
T ss_pred HHHHHHhhhhcCCCcEEEEeC-cchhhcccchHHHHhhCCCEEEEecchhh-cc----cccCceeeeeCHHHHHHHHHh-
Confidence 88999999999 99999953 222 11 11112345677888887 65 42 345689999988877655110
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CC
Q 002263 276 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GT 354 (946)
Q Consensus 276 ~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~ 354 (946)
++ ..+.|. ....+..++ +-..+.++++.++..++.+++.+.|+++ |
T Consensus 252 ------------------------~~-~~~~~~---~~~~a~~~~----l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g- 298 (367)
T 3euc_A 252 ------------------------RP-PYNVNV---LTEATALFA----LEHVAVLDEQAAQLRAERSRVAEGMAAHGG- 298 (367)
T ss_dssp ------------------------CC-SSCCCH---HHHHHHHHH----HTTHHHHHHHHHHHHHHHHHHHHHHHTSTT-
T ss_pred ------------------------CC-CCCCCH---HHHHHHHHH----hcCHHHHHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 00 011111 111122222 2225567889999999999999999998 6
Q ss_pred EEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 355 VEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 355 ~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+++.... ..-+.+.+++..++.+.|.++||.++.. .++.+|+|++ |++|+++++++|.
T Consensus 299 ~~~~~~~-~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~ 362 (367)
T 3euc_A 299 VTVFPSA-ANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFA 362 (367)
T ss_dssp CEECCCS-SSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHH
T ss_pred cEECCCC-CeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHH
Confidence 8865321 2234455556788999999999988653 2478999976 9999999999986
No 234
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.71 E-value=2.3e-15 Score=172.59 Aligned_cols=320 Identities=9% Similarity=0.093 Sum_probs=204.9
Q ss_pred HHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHh----C-
Q 002263 40 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLT----G- 113 (946)
Q Consensus 40 e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g- 113 (946)
++.+.+.++..++..+.+ ++.|.++...|+.+.+.+ +.-. ....|++. +|. .++++.+++++ |
T Consensus 30 ~~~~~~~~~~~~g~~~i~-l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~-----~g~----~~l~~~la~~~~~~~g~ 98 (409)
T 2gb3_A 30 KLVPFAEMAKKRGVRIHH-LNIGQPDLKTPEVFFERI-YENKPEVVYYSHS-----AGI----WELREAFASYYKRRQRV 98 (409)
T ss_dssp GGHHHHHHHHHTTCEEEE-CSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCT-----TCC----HHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHhcCCCEEe-ccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCC-----CCc----HHHHHHHHHHHHHHhCC
Confidence 345555555554444433 345544544566665565 4221 11234332 222 23455666665 3
Q ss_pred -CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc-c
Q 002263 114 -LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-K 182 (946)
Q Consensus 114 -~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~-i 182 (946)
.++.++.+++|+|.+++.++.++ .. +||+|+++...|+++...++. .|.+++.++. ++|++ +
T Consensus 99 ~~~~~~v~~~~g~t~a~~~~~~~~-~~--~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~v~~~~~~~~~~~~~l~~~l 171 (409)
T 2gb3_A 99 DVKPENVLVTNGGSEAILFSFAVI-AN--PGDEILVLEPFYANYNAFAKI----AGVKLIPVTRRMEEGFAIPQNLESFI 171 (409)
T ss_dssp CCCGGGEEEESHHHHHHHHHHHHH-CC--TTCEEEEEESCCTHHHHHHHH----HTCEEEEEECCGGGTSCCCTTGGGGC
T ss_pred CCCHHHEEEeCCHHHHHHHHHHHh-CC--CCCEEEEcCCCchhHHHHHHH----cCCEEEEeccCCCCCCccHHHHHHhh
Confidence 45568889999998888877665 23 789999999999998887643 4777777654 34555 6
Q ss_pred CCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCC--C--CC-CC-ccceEEEecc-ccccccC
Q 002263 183 SGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL--K--PP-GE-LGADIVVGSA-QRFGVPM 251 (946)
Q Consensus 183 ~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l--~--~~-~~-~GaDi~v~s~-k~lg~P~ 251 (946)
++++++|++++| |.+|.+. ++++|.++|+++|+++++|. ..+.... . +. .. .+.|++++|. |.|+.|
T Consensus 172 ~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De-a~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~- 249 (409)
T 2gb3_A 172 NERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDE-VYSEIVFRGEFASALSIESDKVVVIDSVSKKFSAC- 249 (409)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCG-
T ss_pred CcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEC-cccccccCCCCCCccccCCCCEEEEecchhccCCc-
Confidence 778999999998 5699884 69999999999999999943 3222221 0 10 12 3689999997 877432
Q ss_pred CCCCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEeccccccccccccc-CCCccchHHHHHHHHHHHHHHhChh
Q 002263 252 GYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA-TSNICTAQALLANMAAMYAVYHGPE 329 (946)
Q Consensus 252 ~~GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~a-Tsni~t~~~l~a~~aa~y~~~~g~~ 329 (946)
|-.+|++++++ ++.+.+... +... +.|. ....++.++ +. .+.+
T Consensus 250 ---G~r~G~~~~~~~~l~~~l~~~--------------------------~~~~~~~~~---~~~~a~~~~--l~-~~~~ 294 (409)
T 2gb3_A 250 ---GARVGCLITRNEELISHAMKL--------------------------AQGRLAPPL---LEQIGSVGL--LN-LDDS 294 (409)
T ss_dssp ---GGCCEEEECSCHHHHHHHHHH--------------------------HHHSCCCCH---HHHHHHHHH--HT-CCHH
T ss_pred ---cceEEEEEECcHHHHHHHHHH--------------------------HhccCCCCH---HHHHHHHHH--Hh-ccHH
Confidence 22379999988 776654100 0011 1111 111122111 11 2567
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEE-cCCCCcCeEEEecCC--HHHHHHHHHHc------CCeeeee---------c
Q 002263 330 GLKTIAQRVHGLAGTFALGLKKLGTVEV-QGLPFFDTVKVKCAD--AHAIASAAYKI------EMNLRVV---------D 391 (946)
Q Consensus 330 Gl~~i~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~~~~~i~~~~--~~~v~~~L~~~------GI~~~~~---------~ 391 (946)
+++++.++..++.+++.+.|+++| +++ .......-+.+.+++ ..++.++|.++ ||.+... .
T Consensus 295 ~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~ 373 (409)
T 2gb3_A 295 FFDFVRETYRERVETVLKKLEEHG-LKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLG 373 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-CCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-ceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCC
Confidence 788999999999999999999886 877 432211123335542 78899999887 9987542 1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 ~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++.+|++++ ++++|++++++.|..
T Consensus 374 ~~~iRis~~--~~~e~i~~~~~~l~~ 397 (409)
T 2gb3_A 374 KKEIRIACV--LEKDLLSRAIDVLME 397 (409)
T ss_dssp SSEEEEECC--SCHHHHHHHHHHHHH
T ss_pred CCEEEEEeC--CCHHHHHHHHHHHHH
Confidence 468999988 899999999999974
No 235
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.71 E-value=8.3e-17 Score=184.23 Aligned_cols=299 Identities=13% Similarity=0.059 Sum_probs=189.3
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--c-cc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--S-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~-~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.|..++...+.+++.+.+|.+ . .. +..++|+++.. ++++.+. .++++|+++...|..+...+...|.+
T Consensus 61 ~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~---~~~~~~~-----~~gd~vl~~~p~~~~~~~~~~~~g~~ 132 (410)
T 3e2y_A 61 FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLF---NSIQGLV-----DPGDEVIIMVPFYDCYEPMVRMAGAV 132 (410)
T ss_dssp TCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH---HHHHHHC-----CTTCEEEEEESCCTTHHHHHHHTTCE
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH---HHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 355566666777777766653 2 33 33444444443 3344331 25678999998888888889999999
Q ss_pred EEEEcCC-----------CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccc
Q 002263 592 IVSVGTD-----------AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGAN 657 (946)
Q Consensus 592 vv~v~~~-----------~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~ 657 (946)
++.++++ .++.+|+++|+++++ +++++|++++|+ .+|.+- .++++|+++|+++|+++++|.++
T Consensus 133 ~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~ 209 (410)
T 3e2y_A 133 PVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS---SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVY 209 (410)
T ss_dssp EEEEECEECCCCSSCCBGGGEECCHHHHHTTCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred EEEEeccccccccccccccCCcCCHHHHHhhcC---CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhh
Confidence 9999886 235689999999986 789999999995 689883 26999999999999999999986
Q ss_pred cc-cccccc--CC----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCc
Q 002263 658 MN-AQVGLT--SP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI 730 (946)
Q Consensus 658 ~~-a~~gl~--~p----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i 730 (946)
.. ...+-. .. ...+.++++.+++|+|+. +|.++|++.+++++.+.+.... .. ...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~------------~~--~~~ 271 (410)
T 3e2y_A 210 EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSV----TGWKLGWSIGPAHLIKHLQTVQ------------QN--SFY 271 (410)
T ss_dssp TTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSC----GGGCCEEEECCHHHHHHHHHHH------------HT--TTC
T ss_pred hhcccCCCCCCCHHHcCCccCeEEEEecchhhcCC----CCceEEEEEECHHHHHHHHHHH------------Hh--hcc
Confidence 41 111110 11 122345778888999853 4678999998877655432100 00 011
Q ss_pred ccCccchhhHHHHHHHHHHH------HcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEeccccccc
Q 002263 731 AAAPWGSALILPISYTYIAM------MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNT 803 (946)
Q Consensus 731 ~~~~~g~~~~~~~a~a~l~~------lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~ 803 (946)
+. +.....++.+++.. ...+.+.+..++...+.+++.+.|++. +.+. .+.+..+ +.+++..+..
T Consensus 272 ~~----~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~--~~~~~~~~~~- 342 (410)
T 3e2y_A 272 TC----ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPI--VPDGGYF--IIADVSSLGA- 342 (410)
T ss_dssp CC----CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEE--BCSBSSE--EEEECGGGCC-
T ss_pred CC----ChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeec--CCCccEE--EEEEchhhhc-
Confidence 11 12222223333432 124456677777778889999999875 3332 2222222 4455543211
Q ss_pred CCC--------CHHHHHHHHH-HCCcccCC-CCCC-------CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 804 AGI--------EPEDVAKRLM-DYGFHGPT-MSWP-------VPGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 804 ~g~--------~~~~i~~~L~-~~Gi~~~~-~~~p-------~~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
+. +..++.++|. ++|+.+.. ..|. ..+.+||+++. ++++|+++++.|++
T Consensus 343 -~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 343 -DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp -CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC--CHHHHHHHHHHHHT
T ss_pred -ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHh
Confidence 11 1347777665 67998632 2221 14789999865 89999999998864
No 236
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.71 E-value=7.5e-16 Score=175.41 Aligned_cols=304 Identities=16% Similarity=0.164 Sum_probs=187.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
..++++.+++++|.+. .+..++|+++...++.+++ ++..++.+++++|+++...|.++...+...|++++.++++++
T Consensus 36 ~~~l~~~la~~~~~~~-~i~~~sGt~a~~~al~~~~-~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 113 (390)
T 3b8x_A 36 VKQYETQFAKTFGSKY-AVMVSSGSTANLLMIAALF-FTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINT 113 (390)
T ss_dssp HHHHHHHHHHHHTCSE-EEEESCHHHHHHHHHHHTT-SSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHHCCCc-EEEECCHHHHHHHHHHHHH-hhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccc
Confidence 5678899999999874 4566778766544443331 000012345689999999888887788889999999999876
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCC--CEEEeC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA--DVCHLN 678 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~Ga--Di~~~s 678 (946)
+.+|+++|+++++ +++++|++++ .+|... ++++|+++|+++|+++|+|+++..+.. .....+|. |+.+++
T Consensus 114 ~~~d~~~l~~~i~---~~~~~v~~~~--~~g~~~-~~~~i~~l~~~~~~~li~D~a~~~g~~--~~~~~~g~~~~~~~~s 185 (390)
T 3b8x_A 114 LNIDIESLKEAVT---DSTKAILTVN--LLGNPN-NFDEINKIIGGRDIILLEDNCESMGAT--FNNKCAGTFGLMGTFS 185 (390)
T ss_dssp CSBCHHHHHHHCC---TTEEEEEEEC--GGGCCC-CHHHHHHHHTTSCCEEEEECTTCTTCE--ETTEETTSSSSEEEEE
T ss_pred cCcCHHHHHHHhC---cCCeEEEEEC--CccChh-hHHHHHHHHHHcCCEEEEECcCcccCE--ECCcccccccceEEEE
Confidence 8999999999996 6899999874 567777 899999999999999999998753221 12223454 666654
Q ss_pred C--CcccccCCCCCCCcceeEEEec-ccCCCCCC-CccccCCC---------------C-CCCCCCCCCCCcccCccchh
Q 002263 679 L--HKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGG---------------I-PAPEKSQPLGTIAAAPWGSA 738 (946)
Q Consensus 679 ~--hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~-~~v~~~~d---------------~-~~~~~~~~~~~i~~~~~g~~ 738 (946)
. +|.|. +|.| |++++++ .+.+.+.. ...|...+ + ..+..+....+..+ +.
T Consensus 186 ~~~~k~~~-----~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~ 255 (390)
T 3b8x_A 186 SFYSNHIA-----TMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRP----LE 255 (390)
T ss_dssp CCTTSSSC-----SSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCC----CH
T ss_pred ccCCCCCc-----cCCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCc----CH
Confidence 2 23231 2344 8888875 44322110 00110000 0 00000000001111 12
Q ss_pred hHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCC-CceeeeEEEecccccccCCCCHHHHHHHHHH
Q 002263 739 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 817 (946)
Q Consensus 739 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~-~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~ 817 (946)
..++.+...+ +.+.+..++...+++++.++|+++..+...++. ....+.+.+.++. ..+.+.+++.+.|.+
T Consensus 256 ~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~l~~~L~~ 327 (390)
T 3b8x_A 256 MSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKK---DSGVIRKQLVENLNS 327 (390)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECT---TSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecC---cCcccHHHHHHHHHH
Confidence 2222222222 445666677778899999999875233222211 1123334455431 124678899999999
Q ss_pred CCcccCCCC------C-CC-------------------CCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 818 YGFHGPTMS------W-PV-------------------PGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 818 ~Gi~~~~~~------~-p~-------------------~~~lri~~t~~~t~~eid~~~~aL 853 (946)
+||.+.... . |. .+.||+++...+|++|||+++++|
T Consensus 328 ~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 328 AGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp TTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 999865321 1 10 036999999999999999999886
No 237
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.71 E-value=3.1e-15 Score=169.91 Aligned_cols=326 Identities=14% Similarity=0.127 Sum_probs=202.6
Q ss_pred HHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC--CCc
Q 002263 41 MIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL--PMS 117 (946)
Q Consensus 41 ~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~--~~~ 117 (946)
+.+...++...+..+.+| +.|..+...|+.+.+.+.+.. .-...|++. +|..+....+.+.+.+..|. ++.
T Consensus 18 ~~~~~~~~~~~g~~~i~l-~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~g~~~l~~~la~~~~~~~g~~~~~~ 91 (388)
T 1j32_A 18 IDAKAKAMKAEGIDVCSF-SAGEPDFNTPKHIVEAAKAALEQGKTRYGPA-----AGEPRLREAIAQKLQRDNGLCYGAD 91 (388)
T ss_dssp THHHHHHHHTTTCCCEEC-CCSSCSSCCCHHHHHHHHHHHHTTCCSCCCT-----TCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred HHHHHHHHHhcCCCEEEC-CCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC-----CCCHHHHHHHHHHHHHhcCCCCChh
Confidence 344445554444444333 444444445666654443211 002234332 22222223333444444564 556
Q ss_pred ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc----------cccc-cCCCE
Q 002263 118 NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDV 186 (946)
Q Consensus 118 ~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~----------~l~~-i~~~t 186 (946)
++.+++|+|.+++.++.++ .. +||+|+++...|+++...++ ..|++++.++.+ +|++ +++++
T Consensus 92 ~v~~~~g~~~a~~~~~~~~-~~--~gd~vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 164 (388)
T 1j32_A 92 NILVTNGGKQSIFNLMLAM-IE--PGDEVIIPAPFWVSYPEMVK----LAEGTPVILPTTVETQFKVSPEQIRQAITPKT 164 (388)
T ss_dssp GEEEESHHHHHHHHHHHHH-CC--TTCEEEEESSCCTHHHHHHH----HTTCEEEEECCCGGGTTCCCHHHHHHHCCTTE
T ss_pred hEEEcCCHHHHHHHHHHHh-cC--CCCEEEEcCCCChhHHHHHH----HcCCEEEEecCCcccCCCCCHHHHHHhcCcCc
Confidence 8889999998888777665 23 78999999999999887764 357888887653 3445 67789
Q ss_pred eEEEEEcC-CCceee---cchHHHHHHHHhCCcEEEEEecCccccCCC-----CCC-----CccceEEEecc-ccccccC
Q 002263 187 CGVLVQYP-GTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPG-----ELGADIVVGSA-QRFGVPM 251 (946)
Q Consensus 187 ~~v~v~~p-n~~G~i---~di~~i~~~a~~~gal~~v~a~~~al~~l~-----~~~-----~~GaDi~v~s~-k~lg~P~ 251 (946)
++|++++| |.+|.+ .++++|+++||++|+++++|. ..+..... +.. .++.|++++|. |.|+.|
T Consensus 165 ~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~- 242 (388)
T 1j32_A 165 KLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDE-IYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMT- 242 (388)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCT-
T ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc-cchhcccCCCCCCCHHHccccccCCEEEEeechhccCCc-
Confidence 99999998 679998 469999999999999999953 22221110 111 15789999998 776422
Q ss_pred CCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH
Q 002263 252 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 331 (946)
Q Consensus 252 ~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl 331 (946)
|..+|++++++++.+.+... +...|.+.. .+ +..++..+.-.+.+.+
T Consensus 243 ---G~r~G~~~~~~~~~~~l~~~--------------------------~~~~~~~~~---~~-~~~a~~~~l~~~~~~~ 289 (388)
T 1j32_A 243 ---GWRVGFLAGPVPLVKAATKI--------------------------QGHSTSNVC---TF-AQYGAIAAYENSQDCV 289 (388)
T ss_dssp ---TTCCEEEECCHHHHHHHHHH--------------------------HHTTTCSCC---HH-HHHHHHHHHHSCSHHH
T ss_pred ---ccceEEEEeCHHHHHHHHHH--------------------------HhhcccCCC---HH-HHHHHHHHHhCCcHHH
Confidence 23379999988876654100 001122221 11 1122211112345678
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CCEEEcCCCCcCeEEEecC----CHHHHHHHHHH-cCCeeeee----cCCeEEEEecc
Q 002263 332 KTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTVKVKCA----DAHAIASAAYK-IEMNLRVV----DSNTVTASFDE 401 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~----~~~~v~~~L~~-~GI~~~~~----~~~~lris~~~ 401 (946)
+++.++..++.+++.+.|+++ | +++......--+.+.++ +..++.+.|.+ +||.+... .++.+|+|+.
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~- 367 (388)
T 1j32_A 290 QEMLAAFAERRRYMLDALNAMPG-LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA- 367 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTT-CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC-
T ss_pred HHHHHHHHHHHHHHHHHHhhCCC-CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec-
Confidence 888999999999999999998 5 77654221111222332 27789999986 79988653 1578999987
Q ss_pred CCCHHHHHHHHHHHhC
Q 002263 402 TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 402 ~~t~edid~ll~~l~~ 417 (946)
+++++++++++.|..
T Consensus 368 -~~~~~i~~~~~~l~~ 382 (388)
T 1j32_A 368 -TDLDTIKRGMERLEK 382 (388)
T ss_dssp -SCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHH
Confidence 689999999998863
No 238
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.71 E-value=5.3e-16 Score=179.00 Aligned_cols=304 Identities=12% Similarity=0.083 Sum_probs=188.0
Q ss_pred HHHHHHHHHhhCCCcccccCCchHH-HHHHHHHHHHHHHHh-cCC------CCCCEEEEcCCCCCCCHHHHHHcCCEEEE
Q 002263 523 NNLGEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRAYHKA-RGD------HHRNVCIIPVSAHGTNPATAAMCGMKIVS 594 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~l~~~sGa~-ge~a~l~a~r~y~~~-~G~------~~~~~Ili~~saHg~~~~~a~~~G~~vv~ 594 (946)
.++++.++++++.+...+..++|++ +.. .-++++.+... +|. .++++|+++...|..+...+...|++++.
T Consensus 81 ~~lr~~ia~~~~~~~~~i~~t~G~~~al~-~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~ 159 (427)
T 3ppl_A 81 VDIRQIWADLLGVPVEQVLAGDASSLNIM-FDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMIS 159 (427)
T ss_dssp HHHHHHHHHHHTSCGGGEEECSSCHHHHH-HHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCcceEEEeCCcHHHHH-HHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEE
Confidence 4677788888888765555555544 331 01233333220 210 01689999988777777778899999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEe-CC-Cccccccc--CHHHHHHHH-HHcCCEEEEeccccc-ccccccC-C
Q 002263 595 VGTDAKGNINIEELRKAAEANRDNLSTLMVT-YP-STHGVYEE--GIDEICKII-HDNGGQVYMDGANMN-AQVGLTS-P 667 (946)
Q Consensus 595 v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt-~P-n~~G~~~~--~i~~I~~ia-~~~g~ll~vD~a~~~-a~~gl~~-p 667 (946)
+|++++| +|+++|+++++ .+++++|+++ +| |.+|.+.+ .+++|+++| +++|+++++|.++.. .+.+-.. +
T Consensus 160 v~~~~~g-~d~~~l~~~l~--~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~ 236 (427)
T 3ppl_A 160 VPMNEDG-PDMDAVEELVK--NPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEV 236 (427)
T ss_dssp EEEETTE-ECHHHHHHHTT--STTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCC
T ss_pred eCCCCCC-CCHHHHHHHHh--cCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCc
Confidence 9998877 99999999994 2688888866 55 57898861 244899999 999999999998642 1111110 0
Q ss_pred ----------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccch
Q 002263 668 ----------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 737 (946)
Q Consensus 668 ----------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~ 737 (946)
+..+.++++.+++|++ ++|.++|++.+++++.+.+.... . ....+++
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~S~SK~~-----~~G~r~G~~~~~~~l~~~~~~~~--~------------~~~~~~~---- 293 (427)
T 3ppl_A 237 IDIVGLGEAAGNPNRFWAFTSTSKIT-----LAGAGVSFFLTSAENRKWYTGHA--G------------IRGIGPN---- 293 (427)
T ss_dssp CCHHHHHHHTTCTTSEEEEEESTTTS-----CTTSSCEEEECCHHHHHHHHHHH--H------------HHCSCCC----
T ss_pred cchhhhhhccCCCCcEEEEechhhcc-----CcCccEEEEEcCHHHHHHHHHHh--h------------cccCCCC----
Confidence 1235568888999983 24678999998877665432110 0 0011111
Q ss_pred hhHHHHHHHHHHHHc--HhhHHHHHHHHHHHHHHHHHHHhccC----CeeeccCCCceeeeEEEecccccccCCCCHHHH
Q 002263 738 ALILPISYTYIAMMG--SKGLTEASKIAILNANYMAKRLEKHY----PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 811 (946)
Q Consensus 738 ~~~~~~a~a~l~~lG--~eGl~~~~~~~~~~a~~l~~~L~~~~----~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i 811 (946)
.....++..++...+ .+.+++..+....+.+++.+.|.+.+ .+.+..+.+..+ +.++++. .+..++
T Consensus 294 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~--~~~~~~~------~~~~~~ 365 (427)
T 3ppl_A 294 KVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYF--ISLDVVP------GTASRV 365 (427)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSC--EEEECST------TCHHHH
T ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEE--EEEECCc------chHHHH
Confidence 111112222222211 12233444444455666666665421 122222222222 4566652 267889
Q ss_pred HHHHHHCCcccCC--CCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 812 AKRLMDYGFHGPT--MSWP-----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 812 ~~~L~~~Gi~~~~--~~~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.+.|.++||.+.. ..|+ ..+++||++... ++++|+++++.|.++++++..
T Consensus 366 ~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~~~ 422 (427)
T 3ppl_A 366 AELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLAAA 422 (427)
T ss_dssp HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998643 2232 358999999765 899999999999999887643
No 239
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.71 E-value=8.3e-16 Score=174.39 Aligned_cols=273 Identities=12% Similarity=0.099 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 176 (946)
+...++++.+++++|++ +..++.+||.+++.++.++. ++||+|+++...|+++...++ ..|.+++.++.
T Consensus 84 ~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~~~~~~~---~~gd~v~~~~~~~~~~~~~~~----~~g~~~~~~~~~d 154 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYS--RALLFISGFAANQAVIAAMM---AKEDRIAADRLSHASLLEAAS----LSPSQLRRFAHND 154 (384)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC---CTTCEEEEETTCCHHHHHHHH----TSSSEEEEECTTC
T ss_pred HHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhC---CCCcEEEEcccccHHHHHHHH----HcCCCEEEeCCCC
Confidence 45667889999999986 46677777877776655542 278999999999999888764 35888888765
Q ss_pred -ccccc-cCC---CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC---C--CC--CccceEEEec
Q 002263 177 -KDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---P--PG--ELGADIVVGS 243 (946)
Q Consensus 177 -~~l~~-i~~---~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~---~--~~--~~GaDi~v~s 243 (946)
+++++ +++ ++++|++.+| |.+|.+.|+++|.++|+++|+++++| +..+.+... . +. ..+.|++++|
T Consensus 155 ~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~di~~~s 233 (384)
T 1bs0_A 155 VTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVD-DAHGTGVIGEQGRGSCWLQKVKPELLVVT 233 (384)
T ss_dssp HHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEE-CTTTTTTSSGGGCCHHHHTTCCCSEEEEE
T ss_pred HHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEE-CCcccceecCCCCchHHhcCCCCcEEEee
Confidence 44555 432 3788888877 67999999999999999999999994 333433221 1 11 1358999999
Q ss_pred c-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHH
Q 002263 244 A-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 322 (946)
Q Consensus 244 ~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y 322 (946)
. |.|+ | || |++++++++++.+... ...+ ....+.|. ....+..+++
T Consensus 234 ~sK~~~-~-----~G-G~~~~~~~~~~~l~~~----------~~~~------------~~~~~~~~---~~~~~~~~al- 280 (384)
T 1bs0_A 234 FGKGFG-V-----SG-AAVLCSSTVADYLLQF----------ARHL------------IYSTSMPP---AQAQALRASL- 280 (384)
T ss_dssp SSSTTS-S-----CC-EEEEECHHHHHHHHHH----------CHHH------------HSSBCCCH---HHHHHHHHHH-
T ss_pred ccchhh-c-----cC-cEEEeCHHHHHHHHHh----------chhh------------hcCCCCCH---HHHHHHHHHH-
Confidence 8 7765 2 33 8999998877654100 0000 00001111 1222223332
Q ss_pred HHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcCeEEEecCC-HHHHHHHHHHcCCeeeeec-------CC
Q 002263 323 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVD-------SN 393 (946)
Q Consensus 323 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~~-------~~ 393 (946)
..+....++++.++..++.+++.+.|+++| +++.. ...+-.+.+.... ..++.+.|.++||.++... .+
T Consensus 281 -~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~ 358 (384)
T 1bs0_A 281 -AVIRSDEGDARREKLAALITRFRAGVQDLP-FTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTA 358 (384)
T ss_dssp -HHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-CEECSCCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCE
T ss_pred -HHHhccccHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCCCCCCCc
Confidence 333221567788889999999999999987 88763 2222223332111 6789999999999886532 26
Q ss_pred eEEEEeccCCCHHHHHHHHHHHh
Q 002263 394 TVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 394 ~lris~~~~~t~edid~ll~~l~ 416 (946)
.+|++++..+|++|+++++++|.
T Consensus 359 ~~Ri~~~~~~~~~~i~~~~~~l~ 381 (384)
T 1bs0_A 359 RLRLTLTAAHEMQDIDRLLEVLH 381 (384)
T ss_dssp EECCBCCTTCCHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCHHHHHHHHHHHH
Confidence 79999999999999999999985
No 240
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.71 E-value=6.5e-16 Score=176.48 Aligned_cols=270 Identities=15% Similarity=0.113 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--c
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--K 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--~ 177 (946)
.+.++++.+|+++|.+ +..++.+||.+++.++. + .. +||+||++...|+++...+...++..|++++.+++ +
T Consensus 56 ~~~~lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~-~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~ 129 (393)
T 1n8p_A 56 NRENLERAVAALENAQ--YGLAFSSGSATTATILQ-S-LP--QGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLN 129 (393)
T ss_dssp HHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHH-T-SC--SSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHH
T ss_pred hHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHH-H-cC--CCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCChH
Confidence 4667889999999987 46677788876666555 3 23 78999999999998888776556778999999987 4
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhC----CcEEEEEecCccccCCCCCCCccceEEEecc-cccccc
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN----GVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVP 250 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~----gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P 250 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++ |+++++|. ..+.+...++.++|+|+++.|. |.|+
T Consensus 130 ~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~-a~~~~~~~~~~~~~~di~~~S~sK~~g-- 206 (393)
T 1n8p_A 130 DLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDN-TFLSPYISNPLNFGADIVVHSATKYIN-- 206 (393)
T ss_dssp HHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEEC-TTTHHHHCCGGGGTCSEEEEETTTTTT--
T ss_pred HHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeC-CccccccCCHHHcCCeEEEEECccccc--
Confidence 5666 7889999999988 6799999999999999999 99999953 4444433456678999999998 6553
Q ss_pred CCCCCCc--e-EEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHh
Q 002263 251 MGYGGPH--A-AFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 326 (946)
Q Consensus 251 ~~~GGP~--~-g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~ 326 (946)
||| . |+++++ +++.+.+.. .++..++.. ++...++...+
T Consensus 207 ----~~G~rigG~~~~~~~~~~~~l~~-------------------------~~~~~g~~~--~~~~~~~~~~~------ 249 (393)
T 1n8p_A 207 ----GHSDVVLGVLATNNKPLYERLQF-------------------------LQNAIGAIP--SPFDAWLTHRG------ 249 (393)
T ss_dssp ----CSSCCCCEEEEESCHHHHHHHHH-------------------------HHHHHCCCC--CHHHHHHHHHH------
T ss_pred ----CCCCceeEEEEeCCHHHHHHHHH-------------------------HHHhcCCCC--CHHHHHHHHhc------
Confidence 344 4 888886 566654410 001111110 11111111111
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcCCC-EE-E-cCC----C------------C-cCeEEEecCC----HHHHHHHHHH
Q 002263 327 GPEGLKTIAQRVHGLAGTFALGLKKLGT-VE-V-QGL----P------------F-FDTVKVKCAD----AHAIASAAYK 382 (946)
Q Consensus 327 g~~Gl~~i~~~~~~~a~~l~~~L~~~g~-~~-~-~~~----~------------~-~~~~~i~~~~----~~~v~~~L~~ 382 (946)
.+.+....++..+++.++++.|++.+. +. + +.. + . ...+.|.+++ +..+.+.|..
T Consensus 250 -l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~ 328 (393)
T 1n8p_A 250 -LKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRL 328 (393)
T ss_dssp -HTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSS
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCc
Confidence 123444556666778888888887642 32 2 110 1 2 3457777764 3344444433
Q ss_pred cCCeee--------e-------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 383 IEMNLR--------V-------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 383 ~GI~~~--------~-------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.++.++ . +.++.||+|++..+++++|+++.++|.
T Consensus 329 ~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~ 389 (393)
T 1n8p_A 329 FTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALK 389 (393)
T ss_dssp SEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred ceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHH
Confidence 233221 0 114789999999999999999999986
No 241
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.71 E-value=3e-16 Score=179.23 Aligned_cols=284 Identities=17% Similarity=0.136 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH----HHcCCEEEEE
Q 002263 520 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSV 595 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a----~~~G~~vv~v 595 (946)
....++++.+++++|.+.. +.+++|++++.++++++ . .++++|+++...|+.....+ ...|++++.+
T Consensus 66 ~~~~~l~~~la~~~g~~~~-~~~~sGt~A~~~al~~~---~-----~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v 136 (392)
T 3qhx_A 66 PTRTALEAALAAVEDAAFG-RAFSSGMAAADCALRAM---L-----RPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV 136 (392)
T ss_dssp HHHHHHHHHHHHHTTCSEE-EEESSHHHHHHHHHHHH---C-----CTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred hHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence 3466899999999998853 55677776665444333 1 24678999888776544443 5689999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
+.+ |+++|+++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|..+|+|+
T Consensus 137 ~~~-----d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~g~~li~D~~~~~--~~~~~~~~~~~di 205 (392)
T 3qhx_A 137 ALA-----DLDAVRAAIR---PTTRLIWVETPTNPLLSIA-DIAGIAQLGADSSAKVLVDNTFAS--PALQQPLSLGADV 205 (392)
T ss_dssp CTT-----CHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHTCEEEEECTTTC--TTTCCGGGGTCSE
T ss_pred CCC-----CHHHHHHhhC---CCCeEEEEECCCCCCcEEe-cHHHHHHHHHHcCCEEEEECCCcc--cccCChHHhCCcE
Confidence 874 8999999996 79999999999 4689998 799999999999999999998642 2234667789999
Q ss_pred EEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 675 CHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
++.|+||+|+.+ |++.+|++++++ ++.+.+.... ... ..+. +.. .+|..+..+
T Consensus 206 ~~~S~sK~lg~~---g~~~~G~v~~~~~~~~~~l~~~~-------------~~~-g~~~----~~~---~~~~~~~~l-- 259 (392)
T 3qhx_A 206 VLHSTTKYIGGH---SDVVGGALVTNDEELDQSFAFLQ-------------NGA-GAVP----GPF---DAYLTMRGL-- 259 (392)
T ss_dssp EEEETTTTTTCS---SCCCCEEEEESCHHHHHHHHHHH-------------HHH-CCCC----CHH---HHHHHHHHH--
T ss_pred EEEcCccccCCC---CCceEEEEEECcHHHHHHHHHHH-------------Hhc-CCCC----CHH---HHHHHHhhh--
Confidence 999999998521 224588888874 5544332100 000 0111 111 123322222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCc------------eeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGT------------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~~~---v~~~~~~~~------------~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
+.+....++..+++.++++.|++... +.+++-.+. ....+.|.++. .......+.+.|...
T Consensus 260 ~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~----~~~~~~~~~~~l~~~ 335 (392)
T 3qhx_A 260 KTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRA----GRTAAEQLCAKTNIF 335 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT----CHHHHHHHHHHCSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCC----cHHHHHHHHHhCCCc
Confidence 33445556677888899999987532 223321110 01124455431 002345666666656
Q ss_pred CcccCCCC------CC---------------CCCEEEEEcCCCCCHHHHHHHHHHH
Q 002263 819 GFHGPTMS------WP---------------VPGTLMIEPTESESKEELDRYCDAL 853 (946)
Q Consensus 819 Gi~~~~~~------~p---------------~~~~lri~~t~~~t~~eid~~~~aL 853 (946)
|+.+..-+ .| .++.+|+++...+++++++.|.++|
T Consensus 336 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 336 ILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp EECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred eECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 65432110 11 1468999999887777778777765
No 242
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.70 E-value=2.7e-16 Score=177.26 Aligned_cols=286 Identities=13% Similarity=0.075 Sum_probs=181.6
Q ss_pred HHHHHHHHHhhCCCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCC
Q 002263 523 NNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 601 (946)
Q Consensus 523 ~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g 601 (946)
.++++.+++++|.+... +..++|+++.. ++++.+ + +++|+++...|..+...+...|.+++.+|.+++.
T Consensus 62 ~~l~~~la~~~~~~~~~v~~~~g~~~al~---~~~~~~---~----gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 131 (364)
T 1lc5_A 62 FHLHQALARHHQVPASWILAGNGETESIF---TVASGL---K----PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREAD 131 (364)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESSHHHHHH---HHHHHH---C----CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGG
T ss_pred HHHHHHHHHHHCcCHHHEEECCCHHHHHH---HHHHHc---C----CCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCccc
Confidence 46778899999987543 44455555443 334432 2 3789998887777777788899999999987532
Q ss_pred CCC-HHHHHHHHHhcCCCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCCEEEEeccccccc-cc---ccCCCccCC
Q 002263 602 NIN-IEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VG---LTSPGYIGA 672 (946)
Q Consensus 602 ~~D-~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~-~g---l~~pg~~Ga 672 (946)
.++ ++++.++++ +++++|++++|+ .+|.+. + +++|+++|+++|+++++|+++.... .+ +......+.
T Consensus 132 ~~~~l~~~~~~~~---~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 207 (364)
T 1lc5_A 132 GWQLTDAILEALT---PDLDCLFLCTPNNPTGLLP-ERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPH 207 (364)
T ss_dssp TTCCCTTHHHHCC---TTCCEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTT
T ss_pred ccchhHHHHHhcc---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCC
Confidence 234 354544443 678889999995 689886 4 9999999999999999999874211 11 100123567
Q ss_pred CEEEeCCCcccccCCCCCCCcceeEE-EecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 673 DVCHLNLHKTFCIPHGGGGPGMGPIG-VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 673 Di~~~s~hK~f~~P~g~GGPg~G~i~-~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
|+++.++||+|+. +|.++|+++ +++++.+.+... . . ..+. +.....++.++|..
T Consensus 208 ~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~l~~~------------~--~--~~~~----~~~~~~~~~~~l~~- 262 (364)
T 1lc5_A 208 IWVLRSLTKFYAI----PGLRLGYLVNSDDAAMARMRRQ------------Q--M--PWSV----NALAALAGEVALQD- 262 (364)
T ss_dssp EEEEEESTTTTTC----TTTCCEEEECCCHHHHHHHHHH------------S--C--TTCS----CHHHHHHHHHGGGC-
T ss_pred EEEEEECchhhcC----CccceEEEEECCHHHHHHHHHh------------C--C--CCCC----CHHHHHHHHHHHhC-
Confidence 8889999999853 356789998 777665443210 0 0 0111 12222222233332
Q ss_pred cHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC--
Q 002263 752 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP-- 828 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p-- 828 (946)
.+.+.+..++...+++++.+.|++...+.+..+.+.+ +.++++. +..++.++|.++||.+.. ..|+
T Consensus 263 -~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~---~~~~~~~-------~~~~l~~~l~~~gi~v~~g~~~~~~ 331 (364)
T 1lc5_A 263 -SAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANY---LLLRCER-------EDIDLQRRLLTQRILIRSCANYPGL 331 (364)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSE---EEEEESC-------TTCCHHHHHHTTTEECEECTTSTTC
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeE---EEEECCC-------cHHHHHHHHHHCCcEEeeCcccCCC
Confidence 2456666667778888999999864233222222322 3455431 234788999999998643 2232
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 829 VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 829 ~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.++++||+++ +.+|+++++++|++++++++
T Consensus 332 ~~~~iRis~~---~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 332 DSRYYRVAIR---SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp CTTEEEEECC---CHHHHHHHHHHHHHHC----
T ss_pred CCCEEEEEeC---CHHHHHHHHHHHHHHhhccc
Confidence 2478999974 68999999999999877654
No 243
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.70 E-value=8.7e-16 Score=174.70 Aligned_cols=300 Identities=13% Similarity=0.106 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHhhC--CCccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC
Q 002263 521 MFNNLGEWLCTITG--FDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 597 (946)
Q Consensus 521 ~~~el~~~la~l~G--~~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~ 597 (946)
+...+.+++.+.+| .+... +..++|+++... +++.+. .++++|+++...|..+...+...|.+++.+|.
T Consensus 69 lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~---~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~ 140 (390)
T 1d2f_A 69 FLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE---LIRQWS-----ETGEGVVIHTPAYDAFYKAIEGNQRTVMPVAL 140 (390)
T ss_dssp HHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHH---HHHHSS-----CTTCEEEEEESCCHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHH---HHHHhc-----CCCCEEEEcCCCcHHHHHHHHHCCCEEEEeec
Confidence 44555666666667 33333 444455544433 333321 24588999888776666678889999999998
Q ss_pred CCCC---CCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccccc-cc--ccCCC
Q 002263 598 DAKG---NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPG 668 (946)
Q Consensus 598 ~~~g---~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a~-~g--l~~pg 668 (946)
++++ .+|+++|++++++ .++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.... .+ +....
T Consensus 141 ~~~~~~~~~d~~~l~~~l~~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 218 (390)
T 1d2f_A 141 EKQADGWFCDMGKLEAVLAK--PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS 218 (390)
T ss_dssp EECSSSEECCHHHHHHHHTS--TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGG
T ss_pred ccCCCccccCHHHHHHHhcc--CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHH
Confidence 6543 5899999999972 378999999995 6898852 38999999999999999999864211 11 11111
Q ss_pred ccC--C-CEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHH
Q 002263 669 YIG--A-DVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 669 ~~G--a-Di~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
.+. . |+ +.++||+|+. +|.++|+++++ +++.+.+.....+ ....++. +.....++
T Consensus 219 ~~~~~~~d~-~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~-------------~~~~~~~---~~~~~~a~ 277 (390)
T 1d2f_A 219 NVARGDWAL-LTSGSKSFNI----PALTGAYGIIENSSSRDAYLSALKG-------------RDGLSSP---SVLALTAH 277 (390)
T ss_dssp GTCCSSEEE-EECSHHHHTC----GGGCCEEEEECSHHHHHHHHHHHHT-------------TSCCCSC---CHHHHHHH
T ss_pred HcchhhHhh-ccCccHhhcc----cChhheEEEECCHHHHHHHHHHHhh-------------hcccCCC---CHHHHHHH
Confidence 222 2 67 8889999853 35678999985 4554433110000 0011010 12222222
Q ss_pred HHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCccc
Q 002263 745 YTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 822 (946)
Q Consensus 745 ~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~-~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~ 822 (946)
.+.+. .+.+.+.+..++...+.+++.+.|++ ...+.+..+.+.++ +.++++. .+.+..++.++|. ++|+.+
T Consensus 278 ~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~l~~~l~~~~gi~v 350 (390)
T 1d2f_A 278 IAAYQ-QGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYL--AWLDLRP----LNIDDNALQKALIEQEKVAI 350 (390)
T ss_dssp HHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSE--EEEECGG----GCCCHHHHHHHHHHTTCEEC
T ss_pred HHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEE--EEEEccc----cCCCHHHHHHHHHHHcCEEe
Confidence 33333 23455666777777888999999987 32222212222221 3456642 1357889999999 689986
Q ss_pred CC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 823 PT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 823 ~~-~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.. ..|. .++.+||+++. ++++++++++.|.+++++.
T Consensus 351 ~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 351 MPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp EEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred eCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 43 2221 25789999986 4788999999998887653
No 244
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.70 E-value=3.8e-16 Score=179.50 Aligned_cols=295 Identities=17% Similarity=0.195 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~ 596 (946)
...++++++++++|.+.+ +..++|+++...++.++ . .++++|+++...|+++... +...|++++.++
T Consensus 57 ~~~~l~~~la~~~g~~~~-~~~~~gt~a~~~al~~l---~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 127 (412)
T 2cb1_A 57 TAKALEERLKALEGALEA-VVLASGQAATFAALLAL---L-----RPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVD 127 (412)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHTT---C-----CTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 356788999999998743 45566776554443322 1 2568899998877654443 345799999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
. |+++|+++++ ++|++|++++| |.+|.+. |+++|+++|+++|+++++|+++... +....|..++.|++
T Consensus 128 ~------~~~~l~~~i~---~~~~~v~~~~~~n~~G~~~-~l~~i~~l~~~~~~~li~D~~~~~~-~~~~~~~~~~~di~ 196 (412)
T 2cb1_A 128 P------EPEAVREALS---AKTRAVFVETVANPALLVP-DLEALATLAEEAGVALVVDNTFGAA-GALCRPLAWGAHVV 196 (412)
T ss_dssp S------SHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHTCEEEEECGGGTT-TTSCCGGGGTCSEE
T ss_pred C------CHHHHHHHhc---cCCeEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEECCCccc-cccCCccccCCeEE
Confidence 6 4899999996 78999999999 4689998 7999999999999999999987432 01234556789999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEec-ccC----CCC-CCCccccC-------CCCCCCCCCCCCCCcccCccchhhHHH
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKK-HLA----PFL-PSHPVVST-------GGIPAPEKSQPLGTIAAAPWGSALILP 742 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~----~~l-p~~~v~~~-------~d~~~~~~~~~~~~i~~~~~g~~~~~~ 742 (946)
+.|+||+|+.| |.++|.+++.+ .+. ..+ +....+.. .++..+-+ ..+.+..+. ...+.
T Consensus 197 ~~S~~K~~~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r-~~~~~~~g~-~~~~~--- 267 (412)
T 2cb1_A 197 VESLTKWASGH----GSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVR-TLGLSLCGM-ALSPF--- 267 (412)
T ss_dssp EEETTTTTTCS----SCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHH-HHHTTTTCC-CCCHH---
T ss_pred EECCcccccCC----CCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHH-HHHHHhcCC-CCChH---
Confidence 99999998533 12245555544 321 001 10000000 00000000 000010000 00111
Q ss_pred HHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee-eccCCC------------ceeeeEEEecccccccCCCC
Q 002263 743 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL-FRGVNG------------TVAHEFIVDLRGLKNTAGIE 807 (946)
Q Consensus 743 ~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~-~~~~~~------------~~~~e~v~~~~~~~~~~g~~ 807 (946)
.+|. ...+-+.+.+..++...+++++.++|.+. +.+. +++... .....+.|.+ + +
T Consensus 268 ~a~~--~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-------~-~ 337 (412)
T 2cb1_A 268 NAYL--LFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-------G-D 337 (412)
T ss_dssp HHHH--HHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-------S-S
T ss_pred HhHH--HHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-------C-C
Confidence 1222 22233445555566668899999999875 3422 232110 0112233433 2 4
Q ss_pred HHHHHHHHHHCCcccCCCC---------CC-------C-----------CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 808 PEDVAKRLMDYGFHGPTMS---------WP-------V-----------PGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 808 ~~~i~~~L~~~Gi~~~~~~---------~p-------~-----------~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.+++.+.|.+.|+.. ..+ .| + ++.+|++++..+++++||+|+++|++
T Consensus 338 ~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 338 LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 677888888888875 321 11 0 57899999999999999999999864
No 245
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.70 E-value=1.4e-16 Score=180.03 Aligned_cols=294 Identities=15% Similarity=0.154 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC
Q 002263 521 MFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 597 (946)
Q Consensus 521 ~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~ 597 (946)
+...+.+++.+..|.+ ... +.+++|+++...+ ++.+. .++++|+++...|..+...+...|++++.+|.
T Consensus 63 lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~---~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 134 (377)
T 3fdb_A 63 LSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIA---IDHFT-----PAQSKVIVPTPAYPPFFHLLSATQREGIFIDA 134 (377)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH---HHHHS-----CTTCCEEEEESCCTHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHH---HHHhc-----CCCCEEEEcCCCcHhHHHHHHHcCCEEEEccC
Confidence 4445566666666643 333 4455565555433 33321 24578999888887777778899999999999
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc--CHHHHHHHHHHcCCEEEEecccccc-cccccCCCc----
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGLTSPGY---- 669 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a-~~gl~~pg~---- 669 (946)
+++ +|+++|+++++ ++++++++++| |.+|.+.+ ++++|+++|+++|+++++|+++... ..+-..+..
T Consensus 135 ~~~--~d~~~l~~~l~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 209 (377)
T 3fdb_A 135 TGG--INLHDVEKGFQ---AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSD 209 (377)
T ss_dssp TTS--CCHHHHHHHHH---TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCH
T ss_pred CCC--CCHHHHHHHhc---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHc
Confidence 776 99999999998 56889999999 56888752 5888888999999999999986421 111001111
Q ss_pred --cCCCEEEeCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q 002263 670 --IGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 746 (946)
Q Consensus 670 --~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a 746 (946)
.+.++++.+++|+|+. +|.++|++.+ ++++.+.+.... .....+. +.....++.+
T Consensus 210 ~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~~--------------~~~~~~~----~~~~~~a~~~ 267 (377)
T 3fdb_A 210 TAASVCITITAPSKAWNI----AGLKCAQIIFSNPSDAEHWQQLS--------------PVIKDGA----STLGLIAAEA 267 (377)
T ss_dssp HHHHHEEEEECSTTTTTC----GGGCCEEEECCSHHHHHHHHHSC--------------HHHHCCC----CHHHHHHHHH
T ss_pred cCCCcEEEEEeChHhccC----cchhheEEEeCCHHHHHHHHHHH--------------HhhcCCC----CHHHHHHHHH
Confidence 2334888899999853 4677897776 455544331100 0000111 1222222333
Q ss_pred HHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC-CcccCC
Q 002263 747 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHGPT 824 (946)
Q Consensus 747 ~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~-Gi~~~~ 824 (946)
.+. .+.+.+.+..++...+.+++.+.|++. ..+.+..+.+.++ +.++++. .+.+ .++.++|.++ ||.+..
T Consensus 268 ~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~-~~~~~~l~~~~gi~v~~ 339 (377)
T 3fdb_A 268 AYR-YGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYL--MWIDFRD----TTIE-GSPSEFFIEKAKVAMND 339 (377)
T ss_dssp HHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSE--EEEECTT----SCCC-SCHHHHHHHHHCEECEE
T ss_pred HHh-ccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEE--EEEECcc----cCCC-HHHHHHHHHhCCEEecC
Confidence 333 334556777777888899999999873 2332222222221 3466652 1233 5677777765 998642
Q ss_pred -CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 825 -MSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 825 -~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
..|. ..+.+||+++ .++++++++++.|++++++
T Consensus 340 g~~~~~~~~~~~Ris~~--~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 340 GAWFGEDGTGFCRLNFA--TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp GGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred ChhccCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 2222 2589999987 3799999999999887653
No 246
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.70 E-value=1.6e-16 Score=179.61 Aligned_cols=294 Identities=17% Similarity=0.107 Sum_probs=188.1
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 600 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~- 600 (946)
..++++.+++++|.+.. +.+++|+++...++.+++ .+++++|+++...|++....+...|++++.++++++
T Consensus 37 ~~~l~~~la~~~~~~~~-~~~~sGt~al~~al~~~~-------~~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 37 VTELEDRLADFVGAKYC-ISCANGTDALQIVQMALG-------VGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRT 108 (367)
T ss_dssp HHHHHHHHHHHHTCSEE-EEESCHHHHHHHHHHHTT-------CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhC-------CCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCcc
Confidence 56788999999998843 556778766654443331 235689999999888888888999999999999876
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEeccccccccc-ccCCCccCCCEEEeCC
Q 002263 601 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LTSPGYIGADVCHLNL 679 (946)
Q Consensus 601 g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~g-l~~pg~~GaDi~~~s~ 679 (946)
+.+|+++|+++++ +++++|+++ |.+|... ++++|.++|+++|+++++|+++..+... ....+.+| |++++|+
T Consensus 109 ~~~d~~~l~~~i~---~~~~~v~~~--~~~G~~~-~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-di~~~Sf 181 (367)
T 3nyt_A 109 YNLDPQLLEAAIT---PRTKAIIPV--SLYGQCA-DFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLS-TVACTSF 181 (367)
T ss_dssp CSBCGGGTGGGCC---TTEEEECCB--CGGGCCC-CHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSS-SEEEEEC
T ss_pred CCcCHHHHHHhcC---cCCcEEEee--CCccChh-hHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCC-CEEEEEC
Confidence 8999999999996 789988854 3579887 8999999999999999999987532211 01123344 9999986
Q ss_pred --CcccccCCCCCCCcceeEEEe-cccCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 680 --HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 680 --hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
||+|+.+ |. +|+++++ +.+.+.+.. ...+....+ .......+.. .+...++.+.+.+ +.
T Consensus 182 ~~~K~l~~~----g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~---~~~~~g~~~~----~~~~~aa~~~~~l-----~~ 244 (367)
T 3nyt_A 182 FPSAPLGCY----GD-GGAIFTNDDELATAIRQIARHGQDRRY---HHIRVGVNSR----LDTLQAAILLPKL-----EI 244 (367)
T ss_dssp CTTSSSCCS----SC-CEEEEESCHHHHHHHHHHTBTTEEETT---EECSCCCBCC----CCHHHHHHHHHHH-----HT
T ss_pred CCCCcCCCc----Cc-eeEEEeCCHHHHHHHHHHHhcCCCcCc---eeeccCcCCC----ccHHHHHHHHHHH-----HH
Confidence 7988421 22 5667664 444332210 000100000 0000000111 1222222222222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCC-CceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC-C----
Q 002263 756 LTEASKIAILNANYMAKRLEKH-YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-P---- 828 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~-~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~-p---- 828 (946)
+.+..++...+++++.+.|++. +.+...... ...++.+.+... +.+++.++|.++||.+...+. |
T Consensus 245 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~L~~~GI~~~~~~~~~~~~~ 316 (367)
T 3nyt_A 245 FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD--------NRESVQASLKAAGVPTAVHYPIPLNKQ 316 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS--------SHHHHHHHHHHHTCCCBCSCSSCGGGS
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC--------CHHHHHHHHHHCCCceeccCCCccccC
Confidence 4555566667888999999875 333221111 123334555432 578999999999997643221 1
Q ss_pred -----------C-----CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 829 -----------V-----PGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 829 -----------~-----~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
. ...|++.+....|++|+|++++++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 317 PAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp GGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred hhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 0 24789999899999999999999864
No 247
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.70 E-value=9.9e-15 Score=162.20 Aligned_cols=294 Identities=15% Similarity=0.110 Sum_probs=197.9
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc
Q 002263 59 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 138 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~ 138 (946)
++.+..+...|+.+.+.+.+....+ +.|. . . ...++++.+|+++|.++.++.+++|+|.++..++.++
T Consensus 21 l~~n~~~~~~~~~v~~a~~~~~~~~---~~y~-~--~----~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~-- 88 (337)
T 3p1t_A 21 LAFNENPEAVEPRVQAAIAAAAARI---NRYP-F--D----AEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-- 88 (337)
T ss_dssp CSSCCCCSCCCHHHHHHHHHHGGGT---TSCC-T--T----HHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--
T ss_pred eeCCCCCCCCCHHHHHHHHHhhhhh---ccCC-C--C----chHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--
Confidence 4555556667777776666533323 3331 1 1 2456788999999998888999999997777665543
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--------cccccCCCEeEEEEEcC-CCceeecchHHHHHH
Q 002263 139 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKN 209 (946)
Q Consensus 139 ~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~i~~~t~~v~v~~p-n~~G~i~di~~i~~~ 209 (946)
+||+|+++...|+++...+ +..|++++.++.+ ++++. .++++|++.+| |.+|.+.|++++.++
T Consensus 89 ---~gd~vl~~~p~~~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~l 160 (337)
T 3p1t_A 89 ---SSMRFVTAWPGFDGYRARI----AVSGLRHFEIGLTDDLLLDPNDLAQV-SRDDCVVLANPSNPTGQALSAGELDQL 160 (337)
T ss_dssp ---TTSEEEEESSSCSHHHHHH----TTSCCEEEEECBCTTSSBCHHHHTTC-CTTEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred ---CCCeEEEeCCCcHHHHHHH----HHcCCEEEEecCCCCCCCCHHHHHhh-cCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 6899999999999887764 4579999988764 22222 46789999998 679999999999999
Q ss_pred HHhCCcEEEEEecCcc-ccC--CCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCC
Q 002263 210 AHANGVKVVMATDLLA-LTI--LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGK 285 (946)
Q Consensus 210 a~~~gal~~v~a~~~a-l~~--l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~ 285 (946)
+++++. ++++ +..+ ++. ...+...+.|++++|. |.|+. .|..+|++++++++++.+...
T Consensus 161 ~~~~~~-~ivD-ea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~----~G~r~G~~~~~~~~~~~l~~~----------- 223 (337)
T 3p1t_A 161 RQRAGK-LLID-ETYVDYSSFRARGLAYGENELVFRSFSKSYGL----AGLRLGALFGPSELIAAMKRK----------- 223 (337)
T ss_dssp HHHCSE-EEEE-CTTGGGSSCSSSCCCCBTTEEEEEESSSTTCC----TTTCCEEEECCHHHHHHHHTT-----------
T ss_pred HHhCCc-EEEE-CCChhhccccccccccCCCEEEEeeCchhccC----cchheEEEEeCHHHHHHHHhh-----------
Confidence 999997 4553 3322 221 1122345678999987 77753 245679999988877655110
Q ss_pred cceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCe
Q 002263 286 PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDT 365 (946)
Q Consensus 286 ~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~ 365 (946)
+...+.|. ....++.+ .+-..+.+++..++..++.+++.+.|+++| +++... ...-
T Consensus 224 ---------------~~~~~~~~---~~~~a~~~----~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~ 279 (337)
T 3p1t_A 224 ---------------QWFCNVGT---LDLHALEA----ALDNDRAREAHIAKTLAQRRRVADALRGLG-YRVASS-EANF 279 (337)
T ss_dssp ---------------SCTTCSCH---HHHHHHHH----HHTCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCCC-SSSE
T ss_pred ---------------cCCCCCCH---HHHHHHHH----HhCCHHHHHHHHHHHHHHHHHHHHHHHHCc-CEECCC-CCeE
Confidence 00111121 11112211 222234566777778888899999999987 776532 1223
Q ss_pred EEEecCCHHHHHHHHHHcCCeeeeec----CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 366 VKVKCADAHAIASAAYKIEMNLRVVD----SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 366 ~~i~~~~~~~v~~~L~~~GI~~~~~~----~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.+..++..++.+.|.++||.++... ++.+|+|++ +++|+++++++|.
T Consensus 280 ~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~ 331 (337)
T 3p1t_A 280 VLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALA 331 (337)
T ss_dssp EEEECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHH
Confidence 44555445678889999999886532 589999987 7999999999986
No 248
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.70 E-value=5.5e-16 Score=178.98 Aligned_cols=309 Identities=18% Similarity=0.221 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHhhCCCc-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCCHHHHHHcCC-------
Q 002263 520 EMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCGM------- 590 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~~~~~a~~~G~------- 590 (946)
+...++.++++++++.+. ..+..++|++++++++.+++.++..+|..++++||+. .+.||....+....|.
T Consensus 72 ~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 151 (430)
T 3i4j_A 72 DVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELY 151 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCcccccccc
Confidence 445678899999997653 2366778888888888888777767776567788865 4556655444333332
Q ss_pred -------EEEEEcCCCC---CCCCHHHHHHHHHhcC-CCeEEEEEeCC-C-ccccccc---CHHHHHHHHHHcCCEEEEe
Q 002263 591 -------KIVSVGTDAK---GNINIEELRKAAEANR-DNLSTLMVTYP-S-THGVYEE---GIDEICKIIHDNGGQVYMD 654 (946)
Q Consensus 591 -------~vv~v~~~~~---g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n-~~G~~~~---~i~~I~~ia~~~g~ll~vD 654 (946)
++..++.+.. +..|+++|++++++++ +++++|+++.+ + ..|.+.+ .+++|+++|++||+++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 231 (430)
T 3i4j_A 152 TPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIAD 231 (430)
T ss_dssp ----CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred CCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 2334444322 3347799999997543 45666666544 3 5566541 2999999999999999999
Q ss_pred cccccccccccCCC---------ccCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCC
Q 002263 655 GANMNAQVGLTSPG---------YIGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKS 724 (946)
Q Consensus 655 ~a~~~a~~gl~~pg---------~~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~ 724 (946)
.++. ++.+.| ....|++++ .|+|+ +| .++|++++++++.+.+.... . ..
T Consensus 232 Ev~~----~~~~~g~~~~~~~~~~~~~di~t~--sK~l~-----~G~~r~G~~~~~~~i~~~~~~~~----~-----~~- 290 (430)
T 3i4j_A 232 EVMS----GMGRCGSPLALSRWSGVTPDIAVL--GKGLA-----AGYAPLAGLLAAPQVYETVMGGS----G-----AF- 290 (430)
T ss_dssp CTTT----TTTTTSSSSGGGGTTTCCCSEEEE--CGGGT-----TTSSCCEEEEECHHHHHHHHHTT----C-----BC-
T ss_pred chhh----CCCcccchhhhhhhcCCCCcEEEE--ccccc-----CCccccEEEEECHHHHHHHhccC----C-----cc-
Confidence 9753 222211 123678876 49884 46 78999999887765442110 0 00
Q ss_pred CCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee-eccCCCceeeeEEEeccc
Q 002263 725 QPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL-FRGVNGTVAHEFIVDLRG 799 (946)
Q Consensus 725 ~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~-v~-~~~~~~~~~~e~v~~~~~ 799 (946)
......+ ++...++++.+.|..+..+.+.+ +...+.++++++|++. +. +. .++ .+.+ +.+++..
T Consensus 291 ~~~~t~~----~~~~~~aaa~aal~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~~ 359 (430)
T 3i4j_A 291 MHGFTYA----GHPVSVAAGLSVLDIVEREDLTG---AAKERGAQLLAGLQALQARFPQMMQVRG-TGLL---LGVVLGD 359 (430)
T ss_dssp CCCCTTT----TCHHHHHHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTE---EEEEEC-
T ss_pred cccCCCC----CCHHHHHHHHHHHHHHHcccHHH---HHHHHHHHHHHHHHHHHHhCCCeEEEEE-EEEE---EEEEecc
Confidence 0001112 23444445556666655554443 3345566666666553 22 21 111 1222 2333321
Q ss_pred ccccC----CCCHHHHHHHHHHCCcccCCCCCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 800 LKNTA----GIEPEDVAKRLMDYGFHGPTMSWP----VPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 800 ~~~~~----g~~~~~i~~~L~~~Gi~~~~~~~p----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..... .....++.++|.++|+.+....++ ..+.+||+++...|++++++++++|+++++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 360 LATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp -----------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 00000 123478999999999987543211 24789999998999999999999999988754
No 249
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.70 E-value=5.1e-16 Score=179.03 Aligned_cols=145 Identities=17% Similarity=0.111 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe-cc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS-DL-- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~-~~-- 176 (946)
...++++.+|+++|.+. ..++.+||+++++++.++ +. +||+||++...|+++...+..+++..|++++.+ +.
T Consensus 59 ~~~~l~~~la~~~g~~~--~v~~~sGt~A~~~~l~~~-~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d 133 (421)
T 2ctz_A 59 TVDVLEKRLAALEGGKA--ALATASGHAAQFLALTTL-AQ--AGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREER 133 (421)
T ss_dssp HHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHH-CC--TTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCC
T ss_pred HHHHHHHHHHHHhCCCc--eEEecCHHHHHHHHHHHH-hC--CCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 45677889999999873 567778888877776654 23 789999999999999998865455679999999 65
Q ss_pred -ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCc-cccCCCCCCCccceEEEecc-cccccc
Q 002263 177 -KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLL-ALTILKPPGELGADIVVGSA-QRFGVP 250 (946)
Q Consensus 177 -~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~-al~~l~~~~~~GaDi~v~s~-k~lg~P 250 (946)
+++++ ++++|++|++.+| |.+|.+.|+++|.++||++|+++++|. .. +.+....+-.+|+|++++|. |.|++|
T Consensus 134 ~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~-~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~ 211 (421)
T 2ctz_A 134 PEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDN-TFGMGGYLLRPLAWGAALVTHSLTKWVGGH 211 (421)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEEC-GGGGGGTSCCGGGGTCSEEEEETTTTTTCS
T ss_pred HHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC-CcccccccCCccccCCeEEEECCcccccCC
Confidence 45566 7889999999988 679999999999999999999999953 44 55544455578999999998 777653
No 250
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.70 E-value=7.5e-16 Score=178.39 Aligned_cols=316 Identities=13% Similarity=0.092 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHH-hcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHK-ARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~-~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
...++++.+++++|.+. .+.+++|+++...++.+++.+.. ..+..++++|+++...|.++...+...|++++.+++++
T Consensus 63 ~~~~l~~~la~~~g~~~-~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~ 141 (437)
T 3bb8_A 63 FNDAFEKKLGEYLGVPY-VLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDI 141 (437)
T ss_dssp HHHHHHHHHHHHHTCSE-EEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEET
T ss_pred HHHHHHHHHHHHHCCCc-EEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccC
Confidence 35688899999999884 35667777655444433310000 00123568999999988888888888999999999876
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccC--CCEEE
Q 002263 600 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG--ADVCH 676 (946)
Q Consensus 600 -~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~G--aDi~~ 676 (946)
++.+|+++|+++++ ++|++|++++ ..|... ++++|+++|+++|+++++|+++...... ....+| .|+++
T Consensus 142 ~~~~~d~~~l~~~i~---~~~~~v~~~~--~~g~~~-~~~~i~~l~~~~~~~li~D~a~~~g~~~--~~~~~~~~~d~~~ 213 (437)
T 3bb8_A 142 PTYNVNASLIEAAVS---DKTKAIMIAH--TLGNLF-DLAEVRRVADKYNLWLIEDCCDALGSTY--DGKMAGTFGDIGT 213 (437)
T ss_dssp TTTEECGGGHHHHCC---TTEEEEEEEC--GGGCCC-CHHHHHHHHHHHTCEEEEECTTCTTCEE--TTEETTSSSSEEE
T ss_pred ccCCcCHHHHHHhcC---CCCeEEEEeC--CCCChh-cHHHHHHHHHHcCCEEEEECccccCceE--CCeecccccCEEE
Confidence 68899999999996 7899999975 456666 7999999999999999999987532211 222345 79988
Q ss_pred eCCCcccccCCCCCCCcceeEEEeccc-CCC---CCCCccc------cC--------CCC-CCC-CC-CCCCCCc-ccCc
Q 002263 677 LNLHKTFCIPHGGGGPGMGPIGVKKHL-APF---LPSHPVV------ST--------GGI-PAP-EK-SQPLGTI-AAAP 734 (946)
Q Consensus 677 ~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~---lp~~~v~------~~--------~d~-~~~-~~-~~~~~~i-~~~~ 734 (946)
.+++|+++.| |+.+|++++++.. .+. +.....+ .. ..+ +.. +. +..+... ..+.
T Consensus 214 ~s~~~~k~l~----~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 289 (437)
T 3bb8_A 214 VSFYPAKHIT----MGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNL 289 (437)
T ss_dssp EECSTTSSSC----CSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBC
T ss_pred EECcCCcCCC----CCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCccc
Confidence 8877766543 3456888887542 222 1100000 00 000 000 00 0011000 0000
Q ss_pred cchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCC-eeeccCC-C--ceeeeEEEecccccccCCCCHHH
Q 002263 735 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP-ILFRGVN-G--TVAHEFIVDLRGLKNTAGIEPED 810 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~-v~~~~~~-~--~~~~e~v~~~~~~~~~~g~~~~~ 810 (946)
..+...++.+.+.+.. +.+..++...+++++.++|++... ..++... + +..+.|++.+.. ..+.+..+
T Consensus 290 ~~~~~~aa~~l~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 361 (437)
T 3bb8_A 290 KITDMQAACGLAQLER-----IEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKE---DSGVSRID 361 (437)
T ss_dssp CCBHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECG---GGSSCHHH
T ss_pred CCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECC---cCcCcHHH
Confidence 0012222223333322 233444456778899999987522 1222110 1 112234554331 12467899
Q ss_pred HHHHHHHCCcccCCCCC------CC-------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHGPTMSW------PV-------------------PGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 811 i~~~L~~~Gi~~~~~~~------p~-------------------~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+.++|.++||.++..+. |. .+.+|++++..+|++|||+++++|++++
T Consensus 362 l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 362 LVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp HHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999998754321 10 1249999999999999999999998764
No 251
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.70 E-value=1.2e-15 Score=173.59 Aligned_cols=282 Identities=16% Similarity=0.199 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~ 596 (946)
...++++.+++++|.+. .+..++|+++.. ++++.+. .++++|+++...|+..... +...|++++.++
T Consensus 53 ~~~~l~~~la~~~~~~~-~i~~~sGt~a~~---~~~~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 123 (386)
T 1cs1_A 53 TRDVVQRALAELEGGAG-AVLTNTGMSAIH---LVTTVFL-----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_dssp HHHHHHHHHHHHHTCSE-EEEESSHHHHHH---HHHHHHC-----CTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred cHHHHHHHHHHHhCCCc-EEEeCCHHHHHH---HHHHHHh-----CCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence 35678899999999873 345567765543 3444331 2467899988877653332 366899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
.+ |+++|+++++ +++++|++++|+ .+|.+. ++++|+++|+++|+++++|+++... ....+..+|.|++
T Consensus 124 ~~-----d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~l~~~~~~~li~De~~~~~--~~~~~~~~~~di~ 192 (386)
T 1cs1_A 124 QG-----DEQALRAALA---EKPKLVLVESPSNPLLRVV-DIAKICHLAREVGAVSVVDNTFLSP--ALQNPLALGADLV 192 (386)
T ss_dssp TT-----CHHHHHHHHH---TCCSEEEEECSCTTTCCCC-CHHHHHHHHHHTTCEEEEECTTTCT--TTCCGGGGTCSEE
T ss_pred CC-----CHHHHHHhhc---cCCcEEEEeCCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCccc--ccCCccccCceEE
Confidence 73 8999999998 688999999995 689988 7999999999999999999987422 2234556799999
Q ss_pred EeCCCcccccCCCCCCCcc-eeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 676 HLNLHKTFCIPHGGGGPGM-GPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~-G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+.++||+|+.| |+.+ |++++++ ++.+.+.....+ .+ .+. +... +++.+..+
T Consensus 193 ~~s~sK~~~~~----~~~~~G~~~~~~~~l~~~l~~~~~~-------------~~-~~~----~~~~---~~~~~~~l-- 245 (386)
T 1cs1_A 193 LHSCTKYLNGH----SDVVAGVVIAKDPDVVTELAWWANN-------------IG-VTG----GAFD---SYLLLRGL-- 245 (386)
T ss_dssp EEETTTTTTCS----SCCCCEEEEESSHHHHHHHHHHHHH-------------HT-CBC----CHHH---HHHHHHHH--
T ss_pred EEcCcccccCC----CCceeEEEEeCcHHHHHHHHHHHHh-------------cC-CCC----CHHH---HHHHHhcc--
Confidence 99999998532 2223 8898886 555443210000 00 011 1111 12211211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCe---eeccCC------------CceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 754 KGLTEASKIAILNANYMAKRLEKHYPI---LFRGVN------------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~~~v---~~~~~~------------~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
+.+.+..+....++.++.+.|++.-.+ .+++-. ....+.+.+.+. + ...++.+.|.++
T Consensus 246 ~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~l~~~ 318 (386)
T 1cs1_A 246 RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD------G-DEQTLRRFLGGL 318 (386)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES------S-CHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC------C-CHHHHHHHHHhC
Confidence 234444455667788888888764111 111100 001222345443 2 267888889899
Q ss_pred CcccCCCCC------------------C--------C-CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 819 GFHGPTMSW------------------P--------V-PGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 819 Gi~~~~~~~------------------p--------~-~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
||.++..++ | + .+.+|+++...++++++++|.++|+++
T Consensus 319 gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 319 SLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp SSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 998642111 1 1 479999999988888889888888765
No 252
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.70 E-value=4e-16 Score=180.14 Aligned_cols=307 Identities=12% Similarity=0.109 Sum_probs=189.3
Q ss_pred ccHHHHHHHHHHHHHHhh-CCCccc---c-cCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHH-cC
Q 002263 516 QGYQEMFNNLGEWLCTIT-GFDSFS---L-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM-CG 589 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~-G~~~~~---l-~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~-~G 589 (946)
+|..++...+.+++.+.. +.+... + .+++|+++.. ++++.+. .++++|+++...|+.+...+.. .|
T Consensus 88 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~---~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~~g 159 (430)
T 2x5f_A 88 QGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLS---LVGDLFV-----NQDDTILLPEHNWGNYKLVFNTRNG 159 (430)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHH---HHHHHHC-----CTTCEEEEESSCCTHHHHHHTTTTC
T ss_pred CCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHH---HHHHHHh-----CCCCEEEEcCCcCccHHHHHHHhcC
Confidence 454444433333333321 655433 3 4444454443 3344331 2468899998887777777888 99
Q ss_pred CEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHH-----cCCEEEEeccccc-
Q 002263 590 MKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHD-----NGGQVYMDGANMN- 659 (946)
Q Consensus 590 ~~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~-----~g~ll~vD~a~~~- 659 (946)
++++.+++++ ++.+|+++|++++++++.+++++++++|+ .+|.+.+ ++++|+++|++ +|+++++|+++..
T Consensus 160 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~ 239 (430)
T 2x5f_A 160 ANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL 239 (430)
T ss_dssp CEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTC
T ss_pred CeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccc
Confidence 9999999876 46799999999998544489999999995 6898861 28999999999 9999999998642
Q ss_pred ccccc--cCCC-c----cCC---CEEEeCCCcccccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCCC
Q 002263 660 AQVGL--TSPG-Y----IGA---DVCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 660 a~~gl--~~pg-~----~Ga---Di~~~s~hK~f~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
...+- .... . .+- ++++.++||+|+. +|.++|++++ ++++.+.+....... . + .
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~riG~~~~~~~~~~~~~~l~~~~~~~-----~--~--~ 306 (430)
T 2x5f_A 240 FYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFA----WGFRVGFMTFGTSDQTTKEVLEAKVKGL-----I--R--S 306 (430)
T ss_dssp BCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTC----GGGCCEEEEEBCCCHHHHHHHHHHHHHH-----H--H--T
T ss_pred cCCcccchHHHHHHhhccCCcceEEEEEecccCCCC----CCCCeEEEEEecCCHHHHHHHHHHHhhh-----h--h--c
Confidence 11111 1111 1 233 5777889999853 3566899999 776654432100000 0 0 0
Q ss_pred CCCcccCccchhhHHHHHHHHHH-HHc-HhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCCceeeeEEEeccccc
Q 002263 727 LGTIAAAPWGSALILPISYTYIA-MMG-SKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVDLRGLK 801 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~-~lG-~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~~~~~~~~~~~e~v~~~~~~~ 801 (946)
...+. +.....++.++|. ... .+.+.+..++...+.+++.+.|++. ..+.+..+.+..+ +.++++
T Consensus 307 -~~~~~----~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~--~~~~~~--- 376 (430)
T 2x5f_A 307 -NISSG----PLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYF--MAIKVH--- 376 (430)
T ss_dssp -TTSSC----CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSE--EEEEES---
T ss_pred -ccCCC----ChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEE--EEeCCC---
Confidence 01111 1222222333333 110 1223335666667888999999832 1232222222221 344543
Q ss_pred ccCCCCHHHHHHHHHH-CCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 802 NTAGIEPEDVAKRLMD-YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 802 ~~~g~~~~~i~~~L~~-~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+.+..++.++|.+ +||.+... ..+.+||+++. .++++++++++.|+++++++
T Consensus 377 ---~~~~~~~~~~l~~~~gi~v~~g---~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 377 ---DVDPEALRKHLIDKYSIGVIAL---NATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp ---SSCHHHHHHHHHHHHCEECEEC---SSSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHhCCEEEecC---CCCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence 3578899999998 99986422 24789999985 48899999999999988764
No 253
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.69 E-value=5.2e-15 Score=171.30 Aligned_cols=295 Identities=16% Similarity=0.173 Sum_probs=193.2
Q ss_pred HHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHHcCC--------
Q 002263 522 FNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 590 (946)
Q Consensus 522 ~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~~G~-------- 590 (946)
..++.+.|++++..+. ..++.++|+.++++++..+|.|. +|++|+ ...++||....+..+.|-
T Consensus 109 ~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t------~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~ 182 (456)
T 4atq_A 109 YVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLAT------GRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNF 182 (456)
T ss_dssp HHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTS
T ss_pred HHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhh------cCCeEEEEecccCCccccccccccCccccccCC
Confidence 4467788999886432 23567899999988888888763 356666 567899998877554321
Q ss_pred -----EEEEEcCCC------CCCCCHHHHHHHHHh-----cCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCE
Q 002263 591 -----KIVSVGTDA------KGNINIEELRKAAEA-----NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQ 650 (946)
Q Consensus 591 -----~vv~v~~~~------~g~~D~e~L~~~i~~-----~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~l 650 (946)
.+..+|... ....+.+.+++.++. ..+++++|++..- +..|++.+ .+++|.++|++||++
T Consensus 183 ~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gil 262 (456)
T 4atq_A 183 GPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIV 262 (456)
T ss_dssp CSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCE
T ss_pred CCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCc
Confidence 356666532 122345555555432 2357888888643 45677652 499999999999999
Q ss_pred EEEecccccccccccCCCccC--------CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCC
Q 002263 651 VYMDGANMNAQVGLTSPGYIG--------ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 722 (946)
Q Consensus 651 l~vD~a~~~a~~gl~~pg~~G--------aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~ 722 (946)
+|+|.+ +.|+.+.|.++ +|+++++ |.++ ||-.+|.+.+++++++.+.....
T Consensus 263 lI~DEV----~tG~GRtG~~~a~e~~gv~PDivt~g--K~lg-----gg~P~~av~~~~~i~~~~~~~~~---------- 321 (456)
T 4atq_A 263 FIADEV----QSGFCRTGEWFAVDHEGVVPDIITMA--KGIA-----GGLPLSAITGRADLLDAVHPGGL---------- 321 (456)
T ss_dssp EEEECT----TTTTTTTSSSSGGGGTTCCCSEEEEC--GGGG-----TTSSCEEEEEEHHHHTTSCTTSS----------
T ss_pred eEeccc----ccccCCccccccccccCCCCchhhhh--hccc-----CcCCceeeEecHHHHhcccccCC----------
Confidence 999986 56777776542 6999884 8763 44567778888777655421100
Q ss_pred CCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC-----ee--eccCCCceeee
Q 002263 723 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-----IL--FRGVNGTVAHE 792 (946)
Q Consensus 723 ~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~-----v~--~~~~~~~~~~e 792 (946)
+ . .+.|+.+.++++.+.|..+-++++.+.++ ...++|.++|+++ +. ++ ..|. |.+
T Consensus 322 -----~--~-Tf~gnpla~aaala~L~~i~~~~l~~~~~---~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~-Gl~--- 386 (456)
T 4atq_A 322 -----G--G-TYGGNPVACAAALAAIDTMEQHDLNGRAR---HIEELALGKLRELAAELSAGGGSVVGDIRGR-GAM--- 386 (456)
T ss_dssp -----C--C-SSSSCHHHHHHHHHHHHHHHHTTHHHHHH---HHHHHHHHHHHHHHHHCC-----CEEEEEEE-TTE---
T ss_pred -----C--C-CCCCChHHHHhhHHHHHHHhhccHHHHHH---HHHHHHHHHHHHHHHhcccccCCceEEeeec-ceE---
Confidence 0 1 14467778888899999998887765443 5567787777653 21 11 1121 222
Q ss_pred EEEeccccc--ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 793 FIVDLRGLK--NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 793 ~v~~~~~~~--~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+-+++..-. .........+.+++.++|+.+.... +.+++||+.|....|++|||++++.|.++++.
T Consensus 387 ~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g-~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 387 LAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCG-TYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp EEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEEC-TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 223322100 0000114578899999999864332 23578999999999999999999999998764
No 254
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.69 E-value=6.1e-15 Score=169.04 Aligned_cols=270 Identities=17% Similarity=0.158 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+|+++|.+ ++.++.+|+.++..++.++ .. +||+|+++...|+++...|+..++..|++++.++.
T Consensus 63 ~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l-~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 137 (404)
T 1e5e_A 63 TVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTI-LK--AGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIP 137 (404)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHH-CC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTST
T ss_pred HHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHH-hC--CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCH
Confidence 4556788999999986 5778888887777666654 23 89999999999999998765545568999999876
Q ss_pred ccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHh-CCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCC
Q 002263 177 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 252 (946)
Q Consensus 177 ~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~-~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~ 252 (946)
+++++ ++++|++|++.+| |.+|.+.|+++|+++|++ +|+++++| +..+.+....|.++|+|+++.|. |+|++|
T Consensus 138 ~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~D-e~~~~~~~~~~~~~~~di~~~S~sK~~~~~-- 214 (404)
T 1e5e_A 138 GEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIAD-NTFCSPMITNPVDFGVDVVVHSATKYINGH-- 214 (404)
T ss_dssp THHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEE-CTTTCTTTCCGGGGTCSEEEEETTTTTTCS--
T ss_pred HHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEE-CCCchhhhCCccccCCEEEEEcCccccCCC--
Confidence 45555 7889999999998 789999999999999999 99999994 34444433345578999999998 877643
Q ss_pred CCCCceEEEEEchhhhh-cCCCceEeEeecCCCCcceEEecccccccccccc-cCCCccchHHHHHHHHHHHHHHhChhh
Q 002263 253 YGGPHAAFLATSQEYKR-MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK-ATSNICTAQALLANMAAMYAVYHGPEG 330 (946)
Q Consensus 253 ~GGP~~g~l~~~~~~~~-~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~-aTsni~t~~~l~a~~aa~y~~~~g~~G 330 (946)
|++-+|++++++++++ .+.... ... + .+. +....++..+++ +.
T Consensus 215 -g~ri~G~~~~~~~~~~~~l~~~~-------------------------~~~~g-~~~-~~~~~~~~~~~l-------~~ 259 (404)
T 1e5e_A 215 -TDVVAGLICGKADLLQQIRMVGI-------------------------KDITG-SVI-SPHDAWLITRGL-------ST 259 (404)
T ss_dssp -SCCCCEEEEECHHHHHHHHHTCC-------------------------CCCCC-CCC-CHHHHHHHHHHH-------TT
T ss_pred -CCCeEEEEEECHHHHHHHHHHHH-------------------------HhCCC-CCC-CHHHHHHHHHhH-------hH
Confidence 2222489999988766 541100 000 0 111 001111111111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEE-Ec-CC----C-----------CcCeEEEecCC-HHHHHHHHHHcCCeeee---
Q 002263 331 LKTIAQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD-AHAIASAAYKIEMNLRV--- 389 (946)
Q Consensus 331 l~~i~~~~~~~a~~l~~~L~~~g~~~-~~-~~----~-----------~~~~~~i~~~~-~~~v~~~L~~~GI~~~~--- 389 (946)
++...++...++.++.+.|++...+. ++ .. + ....+.|.+++ ..++.+.|.+.||.++.
T Consensus 260 ~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~s~ 339 (404)
T 1e5e_A 260 LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLLDNLKLITLAVSL 339 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHTCSSSEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHHHHHHhCCCceeccCC
Confidence 34445556677778888887663242 21 10 0 13346677666 45667777777884322
Q ss_pred ---------------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 ---------------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ---------------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++. ||++++++.|.
T Consensus 340 G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~ 389 (404)
T 1e5e_A 340 GGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFK 389 (404)
T ss_dssp CSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHH
T ss_pred CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHH
Confidence 114789999997 67777777775
No 255
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.69 E-value=4.1e-15 Score=168.72 Aligned_cols=306 Identities=14% Similarity=0.053 Sum_probs=201.2
Q ss_pred CCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhC--CCCcceEEcccHHHHHHHHHHHhcc
Q 002263 62 GYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNI 138 (946)
Q Consensus 62 g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g--~~~~~~sl~~~~Ta~~ea~~la~~~ 138 (946)
|..+...|+.+.+.+.+... ....|++.. .+...++.+.+++.+| .++.++.+++|+|.++++++.++.
T Consensus 35 ~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-------~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~- 106 (391)
T 3dzz_A 35 AEMDFKIAPEIMASMEEKLKVAAFGYESVP-------AEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFT- 106 (391)
T ss_dssp SCCSSCCCHHHHHHHHHHHTTCCCCCBCCC-------HHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS-
T ss_pred cCCCCCCCHHHHHHHHHHHhcCcCCCCCCC-------HHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC-
Confidence 33344466666555543211 122343331 2334455677888888 566789899999988887776652
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----------ccccc-cC-CCEeEEEEEcC-CCceee---c
Q 002263 139 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KS-GDVCGVLVQYP-GTEGEV---L 201 (946)
Q Consensus 139 ~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-----------~~l~~-i~-~~t~~v~v~~p-n~~G~i---~ 201 (946)
. +||+|+++...|+++...++. .|.+++.++. +++++ +. +++++|++.+| |.+|.+ .
T Consensus 107 ~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~ 180 (391)
T 3dzz_A 107 S--PGDQILVQEPVYNMFYSVIEG----NGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEE 180 (391)
T ss_dssp C--TTCEEEECSSCCHHHHHHHHH----TTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHH
T ss_pred C--CCCeEEECCCCcHHHHHHHHH----cCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHH
Confidence 3 789999999999998887653 5788877665 34455 65 78999999998 789999 7
Q ss_pred chHHHHHHHHhCCcEEEEEecCccccCC-----CCCCCcc---ce--EEEecc-ccccccCCCCCCceEEEEEc-hhhhh
Q 002263 202 DYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELG---AD--IVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKR 269 (946)
Q Consensus 202 di~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~~G---aD--i~v~s~-k~lg~P~~~GGP~~g~l~~~-~~~~~ 269 (946)
++++|+++|+++|+++++|. ..+.... .+...++ .| +++.|. |.|+. +|..+|+++++ +++.+
T Consensus 181 ~l~~i~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~ 255 (391)
T 3dzz_A 181 EVKRIAELCAKHQVLLISDE-IHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNL----AALHAACAIIPNPDLRA 255 (391)
T ss_dssp HHHHHHHHHHHTTCEEEEEC-TTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTC----TTTCCEEEECCSHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEec-ccccccCCCCCceehhhcCccccCcEEEEEeChhhccc----cchhheEEEECCHHHHH
Confidence 89999999999999999953 2222111 1112333 56 888887 88753 34568999987 67665
Q ss_pred cCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 002263 270 MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 349 (946)
Q Consensus 270 ~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L 349 (946)
.+... + + .....+.|. ....+..+++ . .+.+.++++.++..++.+++.+.|
T Consensus 256 ~~~~~--------------------~-~--~~~~~~~~~---~~~~a~~~~l--~-~~~~~~~~~~~~~~~~~~~l~~~l 306 (391)
T 3dzz_A 256 RAEES--------------------F-F--LAGIGEPNL---LAIPAAIAAY--E-EGHDWLRELKQVLRDNFAYAREFL 306 (391)
T ss_dssp HHHHH--------------------H-H--HHTCSSCCT---THHHHHHHHH--H-HCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--------------------H-H--hhccCCCCH---HHHHHHHHHH--h-ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 54100 0 0 000112222 1222333332 2 245668889999999999999999
Q ss_pred hc-CCCEEEcCCCCcCeEEEecC----CHHHHHHHHH-HcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 350 KK-LGTVEVQGLPFFDTVKVKCA----DAHAIASAAY-KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 350 ~~-~g~~~~~~~~~~~~~~i~~~----~~~~v~~~L~-~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++ ++++++......-.+.+.++ ...++.++|. ++||.++.- .++.+|+|++ +++++++++++.|..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~ 384 (391)
T 3dzz_A 307 AKEVPEVKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQ 384 (391)
T ss_dssp HHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHH
T ss_pred HhhCCCcEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHH
Confidence 98 63388764321112224433 2788999995 889988642 1378999998 689999999998863
No 256
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.69 E-value=6.2e-16 Score=177.74 Aligned_cols=302 Identities=12% Similarity=0.114 Sum_probs=184.3
Q ss_pred ccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+|..++...+.+++....+.+. ..+.+++|+++... +++.+. .++++|+++.+.|..+...+...|.+++
T Consensus 80 ~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~---~~~~l~-----~~gd~Vl~~~p~~~~~~~~~~~~g~~~~ 151 (418)
T 3rq1_A 80 AGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHH---LIHNYT-----EPGDEVLTADWYWGAYRVICSDTGRTLV 151 (418)
T ss_dssp TCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH---HHHHHS-----CTTCEEEEESSCCTHHHHHHHHTTCEEE
T ss_pred CChHHHHHHHHHHHhcccCccccccEEECCchHHHHHH---HHHHhc-----CCCCEEEECCCCchhHHHHHHHcCCEEE
Confidence 4666666666666666555541 22444555555433 334331 2568999999988888888899999999
Q ss_pred EEcCC-CCCCCCHHHHHHHHHhcC-CCe-EEEEEeCC--Cccccccc--CHHHHHHHHH------HcCCEEEEecccccc
Q 002263 594 SVGTD-AKGNINIEELRKAAEANR-DNL-STLMVTYP--STHGVYEE--GIDEICKIIH------DNGGQVYMDGANMNA 660 (946)
Q Consensus 594 ~v~~~-~~g~~D~e~L~~~i~~~~-~~t-~~vvvt~P--n~~G~~~~--~i~~I~~ia~------~~g~ll~vD~a~~~a 660 (946)
.+|++ +++.+|+++|+++++++. +++ +++++++| |.+|.+.+ .+++|+++|+ ++|+++++|.++. .
T Consensus 152 ~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~ 230 (418)
T 3rq1_A 152 TYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYL-D 230 (418)
T ss_dssp EECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTG-G
T ss_pred EEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc-c
Confidence 99984 456899999999997320 144 47888888 57898861 3566666666 8999999999863 1
Q ss_pred cccc--------cCCCccCCC---EEEeCCCcccccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCCC
Q 002263 661 QVGL--------TSPGYIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 661 ~~gl--------~~pg~~GaD---i~~~s~hK~f~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
++.- ........| +++.+++|+|+. .|.++|++.+ ++++.+.+....-... + ..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~ 298 (418)
T 3rq1_A 231 YSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTM----YGQRVGAMIGISDDEEIADEFFEVNKSTS-------R-AT 298 (418)
T ss_dssp GSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTC----CSSCCEEEEEEESSHHHHHHHHHHHHHHH-------H-HH
T ss_pred ccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcC----cCCcceEEEEEeCCHHHHHHHHHHHHHHH-------h-hc
Confidence 1110 000112334 667789999853 4678999988 6666554321000000 0 00
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHc-----HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccc
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMG-----SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL 800 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG-----~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~ 800 (946)
.++. +.....++...+.... .+.+++..++...+.+++.+.|++. +.+. .+.+.++ +++++
T Consensus 299 ~~~~------~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~--~~~~~--- 365 (418)
T 3rq1_A 299 WSNI------CRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPML--PYRGGFF--ITIPT--- 365 (418)
T ss_dssp TSSC------CHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC--CCCSSSE--EEEEC---
T ss_pred cCCC------chHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--CCCceEE--EEcCC---
Confidence 0011 1111112222221110 1122344455567778888888875 4432 2222221 23343
Q ss_pred cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 801 KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 801 ~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+..++.+.|.++||.+.. .++.+||++. ..++++++++++.|+++++++.
T Consensus 366 -----~~~~~~~~~l~~~gi~v~~----g~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 366 -----DSANAICEELKKEHIYVIA----LANGIRIAAC-GIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp -----TTHHHHHHHHHHTTEECEE----CSSEEEEEGG-GSCHHHHTTHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHHHhCCEEEec----CCCCeEEEEe-cCCHHHHHHHHHHHHHHHHHHh
Confidence 2578899999999998742 2478999976 4689999999999999887653
No 257
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.69 E-value=7.4e-16 Score=177.71 Aligned_cols=286 Identities=13% Similarity=0.184 Sum_probs=184.4
Q ss_pred HHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCCCHHHHHH-----cCCEEEEEc
Q 002263 524 NLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAM-----CGMKIVSVG 596 (946)
Q Consensus 524 el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Il-i~~saHg~~~~~a~~-----~G~~vv~v~ 596 (946)
++.+.|+++++ ++.+ ++.++|++++++++.++|.|. +|++|+ ...++||........ .......+|
T Consensus 131 ~lae~l~~~~p~~~~v-~f~~SGsEA~e~AiklAr~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p 203 (454)
T 4ao9_A 131 RLARLICERFPQIEQL-RFTNSGTEANLMALTAALHFT------GRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLP 203 (454)
T ss_dssp HHHHHHHHHSTTCSEE-EEESSHHHHHHHHHHHHHHHH------TCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEEC
T ss_pred HHHHHHHHhCCCCCEE-EEeCchHHHHHHHHHHHHhcc------cCCeEEEEeCCcCCccccccccccCccCCCCcccCC
Confidence 67788888774 4444 567899999988888888763 356666 567889865433211 223555566
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCCEEEEecccccccccccCCCcc--
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-- 670 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~-- 670 (946)
. .|++++++.++++++++++|++..- +..|++.+ .+++|.++|++||++||+|.++. | +.|.+
T Consensus 204 ~-----nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t----G--R~G~~~a 272 (454)
T 4ao9_A 204 Y-----NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT----S--RLAPHGL 272 (454)
T ss_dssp T-----TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG----G--GGSTTCH
T ss_pred C-----chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc----C--CCccccc
Confidence 5 4899999999988889999888643 45687763 29999999999999999999753 3 22322
Q ss_pred ----C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHH
Q 002263 671 ----G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 671 ----G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
| +|++++ .|.++ ||-.+|.+++++++++.+.... + ... ..+.+.|+.+.++++
T Consensus 273 ~e~~gv~PDi~t~--gK~lg-----gG~Piga~~~~~ei~~~~~~~~-~----------~~~---h~~T~~gnPla~AAa 331 (454)
T 4ao9_A 273 ANKLGIRSDLTTL--GKYIG-----GGMSFGAFGGRADVMALFDPRT-G----------PLA---HSGTFNNNVMTMAAG 331 (454)
T ss_dssp HHHHTCCCSEEEE--EGGGG-----TTSSCEEEEECHHHHGGGCTTT-C----------SCC---CCCTTTTCHHHHHHH
T ss_pred hhccCCCCcEEEe--ccccC-----CCCcceeeeeHHHHHHHHhhcc-C----------Ccc---ccCCCCCCHHHHHHH
Confidence 2 699887 48874 3445788888887776553210 0 000 011133567778888
Q ss_pred HHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEeccc-----ccccCCCC---HHHH
Q 002263 745 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-----LKNTAGIE---PEDV 811 (946)
Q Consensus 745 ~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~-----~~~~~g~~---~~~i 811 (946)
.+.|..+-++++. ++...+.++|+++|+++ +.+. ..|. |.. +-+.+.. .......+ ...+
T Consensus 332 la~L~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~m---~gi~f~~~~~~~~~~~~~~d~~~~~~~ 404 (454)
T 4ao9_A 332 YAGLTKLFTPEAA---GALAERGEALRARLNALCANEGVAMQFTGI-GSL---MNAHFVQGDVRSSEDLAAVDGRLRQLL 404 (454)
T ss_dssp HHHHHHTSCHHHH---HHHHHHHHHHHHHHHHHHHHHTBSCEEEEE-TTE---EEEESCCSCCCSGGGGTTCCHHHHHHH
T ss_pred HHHHHHHhccChh---HHHHHHHHHHHHHHHHHHhhCCCCEEEeee-ceE---EEEEEecCCCCCHHHHHhhhHHHHHHH
Confidence 8889888766544 34456788898888764 2221 2221 222 1222210 10001112 2356
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 812 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 812 ~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
...|+++|++++.. +.+. ++..+|++|||+++++|++++.+...
T Consensus 405 ~~~ll~~Gv~~~p~-----~~~~--~s~~~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 405 FFHLLNEDIYSSPR-----GFVV--LSLPLTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp HHHHHHTTEECCTT-----CEEE--CCTTCCHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHCCEEEcCC-----CCEE--EeCCCCHHHHHHHHHHHHHHHHhccc
Confidence 77889999987522 3333 44457999999999999999888654
No 258
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.69 E-value=2.8e-16 Score=180.53 Aligned_cols=260 Identities=15% Similarity=0.137 Sum_probs=174.1
Q ss_pred HHHHHHHHHHhhCCCccccc--CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCH-----------HHHHH
Q 002263 522 FNNLGEWLCTITGFDSFSLQ--PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNP-----------ATAAM 587 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~--~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~-----------~~a~~ 587 (946)
..++++.+++++|.+...++ .++|++++.++++++. .++|+||++. ..|+.+. ..+..
T Consensus 75 ~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all--------~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~ 146 (427)
T 3i16_A 75 RDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNL--------RPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKE 146 (427)
T ss_dssp HHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHC--------CTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGG
T ss_pred HHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHh--------CCCCEEEEeCCCccHHHHHHHhccccchHHHHHH
Confidence 55778899999999876443 6778776644443321 2568999987 7776655 33456
Q ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeC----C-CcccccccCHHHHHHHHHH--cCCEEEEecccccc
Q 002263 588 CGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY----P-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNA 660 (946)
Q Consensus 588 ~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~----P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a 660 (946)
.|++++.++.+++|.+|+++|+++++++ ++|++|++++ | |.+|.+. |+++|+++||+ +|++++||.++...
T Consensus 147 ~G~~~~~v~~~~~g~~D~e~l~~~l~~~-~~tklV~i~~s~~~p~nptg~i~-dl~~i~~la~~~~~g~~livD~a~~~~ 224 (427)
T 3i16_A 147 FGINYKQVDLKEDGKPNLEEIEKVLKED-ESITLVHIQRSTGYGWRRALLIE-DIKSIVDCVKNIRKDIICFVDNCYGEF 224 (427)
T ss_dssp GTCEEEECCCCTTSSCCHHHHHHHHHTC-TTEEEEEEECSCCSSSSCCCCHH-HHHHHHHHHHHHCTTSEEEEECTTTTT
T ss_pred cCCEEEEecCccCCCcCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCCcccHH-HHHHHHHHHHHhCCCCEEEEECCCccc
Confidence 7999999999889999999999999742 5899999998 8 4689988 79999999999 99999999986422
Q ss_pred cccccCCCccCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 661 QVGLTSPGYIGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 661 ~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
. ....|..+|+|+++.++||+|+ ++| |.+|++++++++.+.+..+.. ....+...+..++
T Consensus 225 ~-~~~~p~~~gaDiv~~S~sK~lg----g~g~~~gG~i~~~~~li~~l~~~~~-----------~~~~g~~~~~~~~--- 285 (427)
T 3i16_A 225 M-DTKEPTDVGADLIAGSLIKNIG----GGIAPTGGYLAGTKDCIEKTSYRLT-----------VPGIGGECGSTFG--- 285 (427)
T ss_dssp S-SSSCGGGGTCSEEEEETTSGGG----TTTCCSCEEEEECHHHHHHHHHHHS-----------CTTTGGGCCCCTT---
T ss_pred c-ccCCccccCCeEEEecCcccCC----CCCCceEEEEEECHHHHHHHHHhcc-----------cCccCccCCccHH---
Confidence 1 1246667899999999999985 223 777999999877765532110 0011111110011
Q ss_pred HHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHC
Q 002263 740 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 740 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
.+|..+ .|-+-+..+.++...++.++++.|+++ +.+ ++++ ++..|..++.+. ++ ......++++.|...
T Consensus 286 ---~a~~~l--~gl~~~~~r~~~~~~~a~~la~~L~~~g~~V-~p~~-~~~~~~~i~~i~-l~--~~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 286 ---VVRSMY--QGLFLAPHISMEALKGAILCSRIMELAGFEV-MPKY-DEKRSDIIQSIK-FN--DKDKLIEFCKGIQTG 355 (427)
T ss_dssp ---CHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE-ESCT-TSCCSSSCEEEE-CS--SHHHHHHHHHHHHHT
T ss_pred ---HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCee-cCCC-CCCCccEEEEEE-EC--CHHHHHHHHHHHhhc
Confidence 022222 222334456677889999999999986 665 6553 222232233221 11 112356788888876
Q ss_pred Cc
Q 002263 819 GF 820 (946)
Q Consensus 819 Gi 820 (946)
..
T Consensus 356 ~~ 357 (427)
T 3i16_A 356 SP 357 (427)
T ss_dssp CS
T ss_pred Cc
Confidence 43
No 259
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.69 E-value=2.2e-15 Score=172.71 Aligned_cols=272 Identities=13% Similarity=0.072 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc---
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 177 (946)
..++++.+|+++|.+ ...++.+|++++.+++. + .. +||+|++++..|+++...+...++..|++++.++.+
T Consensus 69 ~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~-l-~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 142 (403)
T 3cog_A 69 RNCLEKAVAALDGAK--YCLAFASGLAATVTITH-L-LK--AGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIK 142 (403)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHT-T-SC--TTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHH
T ss_pred HHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-H-hC--CCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHH
Confidence 456788999999987 35566777766555444 3 23 789999999999999888877677789999999764
Q ss_pred cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCC-cEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 178 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 178 ~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~g-al~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++| +++++| +..+.+....|-++|+|+++.|. |.|++|
T Consensus 143 ~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD-~~~~~~~~~~~~~~~~div~~S~sK~~~g~--- 218 (403)
T 3cog_A 143 LLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVD-NTFMSPYFQRPLALGADISMYSATKYMNGH--- 218 (403)
T ss_dssp HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEE-CTTTCTTTCCTTTTTCSEEEEETTTTTTCS---
T ss_pred HHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEE-CCCcccccCCccccCCeEEEEcChhhccCC---
Confidence 4555 7889999999998 68999999999999999999 999995 34444444455568999999998 777543
Q ss_pred CCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 254 GGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 254 GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
||--+|+++++ +++.+.+..... ...++.|. ...++...+ -+.+.
T Consensus 219 ~~~~~G~v~~~~~~l~~~l~~~~~------------------------~~g~~~~~---~~~~~~~~~-------l~~l~ 264 (403)
T 3cog_A 219 SDVVMGLVSVNCESLHNRLRFLQN------------------------SLGAVPSP---IDCYLCNRG-------LKTLH 264 (403)
T ss_dssp SCCCCEEEEECCHHHHHHHHHHHH------------------------HHCCCCCH---HHHHHHHHH-------HTTHH
T ss_pred CCCeEEEEEECcHHHHHHHHHHHH------------------------hcCCCCCH---HHHHHHHhh-------hhHHH
Confidence 11114899885 566554411000 00011111 111111111 12233
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCE--------------EEcCC---CCcCeEEEecCC-HHHHHHHHHHcCCeeee-----
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTV--------------EVQGL---PFFDTVKVKCAD-AHAIASAAYKIEMNLRV----- 389 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~--------------~~~~~---~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~----- 389 (946)
...++..+++..+.+.|++...+ ++..+ .....+.|.+++ ..++.+.|.+.||..+.
T Consensus 265 ~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~i~~~~~s~G~ 344 (403)
T 3cog_A 265 VRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGG 344 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCC
Confidence 34455556666666666654212 11110 113346677665 56677777777885321
Q ss_pred -------------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 -------------------------VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 -------------------------~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.||+|++..+++++|++|.++|.
T Consensus 345 ~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~ 396 (403)
T 3cog_A 345 FESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALK 396 (403)
T ss_dssp SSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred cceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 114789999999999999999999986
No 260
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.69 E-value=2.3e-15 Score=171.47 Aligned_cols=280 Identities=17% Similarity=0.196 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCHHHHHHcCCE------
Q 002263 520 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCGMK------ 591 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~~~a~~~G~~------ 591 (946)
+...++++.+++++|.+.. .+..++|+++...++.+++.+ . ++++||+++ +.|+.....+...|.+
T Consensus 87 ~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~--~----~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~ 160 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAH--T----GRKKFVAAMRGFSGRTMGSLSVTWEPKYREPF 160 (395)
T ss_dssp HHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHH--H----SCCEEEEETTCCCCSSHHHHHTCCCHHHHGGG
T ss_pred HHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHH--h----CCCeEEEEcCCcCCCchhhhhhcCCccccccc
Confidence 3466889999999976543 355567777776555544432 1 245666554 5678777777777765
Q ss_pred ------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC----HHHHHHHHHHcCCEEEEecccccc
Q 002263 592 ------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNA 660 (946)
Q Consensus 592 ------vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia~~~g~ll~vD~a~~~a 660 (946)
+..++. .|+++|+++++ +++++|+++.+ |.+|.+. + +++|+++|++||+++++|+++. .
T Consensus 161 ~p~~~~~~~~~~-----~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~-~ 230 (395)
T 1vef_A 161 LPLVEPVEFIPY-----NDVEALKRAVD---EETAAVILEPVQGEGGVRP-ATPEFLRAAREITQEKGALLILDEIQT-G 230 (395)
T ss_dssp CSCSSCEEEECT-----TCHHHHHHHCC---TTEEEEEECSEETTTTSEE-CCHHHHHHHHHHHHHHTCEEEEECTTT-T
T ss_pred CCCCCCeeEeCC-----CcHHHHHHHhc---cCEEEEEEeCccCCCCccC-CCHHHHHHHHHHHHHcCCEEEEEeccc-C
Confidence 344443 58999999996 68888887654 3579775 5 9999999999999999999875 2
Q ss_pred cccccCC-----CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCcc
Q 002263 661 QVGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 661 ~~gl~~p-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~ 735 (946)
++-...+ ...++|++++ ||+|+ +|.++|++++++++.+.+.... ...+.+.
T Consensus 231 ~~~~g~~~~~~~~~~~~d~~s~--sK~~~-----~g~~~G~~~~~~~~~~~l~~~~--------------~~~~~~~--- 286 (395)
T 1vef_A 231 MGRTGKRFAFEHFGIVPDILTL--AKALG-----GGVPLGVAVMREEVARSMPKGG--------------HGTTFGG--- 286 (395)
T ss_dssp TTTTSSSSTHHHHTCCCSEEEE--CGGGG-----TTSSCEEEEEEHHHHHTSCTTS--------------SCCSSTT---
T ss_pred CccCCchhHhhhcCCCCCEEEE--ccccc-----CCCceEEEEehHHHHhhhccCC--------------cCCCcCC---
Confidence 2111111 1235798854 89995 3578999999887665543210 0011121
Q ss_pred chhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeeEEEecccccccCCCCHHHHH
Q 002263 736 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 812 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~--~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~ 812 (946)
+...+.++.+.+..+..++ ..++...+++++.++|++. ..+. .++ .+. -+.++++. +..++.
T Consensus 287 -~~~~~~a~~~al~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~g~---~~~~~~~~-------~~~~l~ 351 (395)
T 1vef_A 287 -NPLAMAAGVAAIRYLERTR---LWERAAELGPWFMEKLRAIPSPKIREVRG-MGL---MVGLELKE-------KAAPYI 351 (395)
T ss_dssp -CHHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHTSCCTTEEEEEE-ETT---EEEEEESS-------CSHHHH
T ss_pred -CHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCceEEEEE-EEE---EEEEEEcC-------hHHHHH
Confidence 2223333444555544333 3345557788999999875 2221 111 122 24455531 257899
Q ss_pred HHHH-HCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 813 KRLM-DYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 813 ~~L~-~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
++|. ++||.+.... .+.+||+++...+++|+++++++|++++
T Consensus 352 ~~l~~~~gi~v~~~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 352 ARLEKEHRVLALQAG---PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHCEECEESS---TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 9999 9999875322 4789999988899999999999998764
No 261
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.69 E-value=4.8e-15 Score=172.31 Aligned_cols=297 Identities=14% Similarity=0.166 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHhhC-CCc-ccccCCchHHHHHHHHHHHHHHHHhc----C--CCCCCEEEEcC-CCCCCCHHHHHHcC-
Q 002263 520 EMFNNLGEWLCTITG-FDS-FSLQPNAGAAGEYAGLMVIRAYHKAR----G--DHHRNVCIIPV-SAHGTNPATAAMCG- 589 (946)
Q Consensus 520 ~~~~el~~~la~l~G-~~~-~~l~~~sGa~ge~a~l~a~r~y~~~~----G--~~~~~~Ili~~-saHg~~~~~a~~~G- 589 (946)
+...++.+.++++++ .+. ..++.++|++++++++.+++.|...+ | ..++++||+++ +.||....+....|
T Consensus 101 ~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~ 180 (449)
T 2cjg_A 101 VAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNT 180 (449)
T ss_dssp HHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCS
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCC
Confidence 345678888999986 222 24667889988887777777664322 1 11267888765 57876654433332
Q ss_pred -------C-----EEEEEcCCCC--C--------CCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC----HHHHHH
Q 002263 590 -------M-----KIVSVGTDAK--G--------NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG----IDEICK 642 (946)
Q Consensus 590 -------~-----~vv~v~~~~~--g--------~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ 642 (946)
+ +++.+|.++. . ..|+++|+++++++.+++++|+++.. |.+|++. + +++|++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~-~~~~~l~~l~~ 259 (449)
T 2cjg_A 181 KPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRH-FRPEFFAAMRE 259 (449)
T ss_dssp CHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEE-CCHHHHHHHHH
T ss_pred chhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCcc-CCHHHHHHHHH
Confidence 2 5777776541 1 25677899999765578888877654 4678654 4 999999
Q ss_pred HHHHcCCEEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCcccc
Q 002263 643 IIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 714 (946)
Q Consensus 643 ia~~~g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~ 714 (946)
+|++||+++++|+++. ++.+.|. ...|++++ .|+| | +|++++++++.+.+.......
T Consensus 260 l~~~~g~lli~DEv~~----g~g~~g~~~~~~~~~~~~di~t~--sK~l--~-------iG~~~~~~~~~~~l~~~~~~~ 324 (449)
T 2cjg_A 260 LCDEFDALLIFDEVQT----GCGLTGTAWAYQQLDVAPDIVAF--GKKT--Q-------VCGVMAGRRVDEVADNVFAVP 324 (449)
T ss_dssp HHHHTTCEEEEECTTT----TTTTTSSSSTHHHHTCCCSEEEE--CGGG--S-------SEEEEECGGGGGSTTCTTTST
T ss_pred HHHHCCcEEEEecccc----CCCccCcceeecccCCCceEEEe--cCcc--c-------EEEEEECHHHhhhhhhcccCC
Confidence 9999999999999864 2322221 24688876 4987 3 677888888776543211100
Q ss_pred CCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CC--ee-eccCCCc
Q 002263 715 TGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP--IL-FRGVNGT 788 (946)
Q Consensus 715 ~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~--v~-~~~~~~~ 788 (946)
. ...+..+ ++...++++.+.+..+.++++. ++...+.+++.++|++. +. +. ..+ .+.
T Consensus 325 --------~-~~~~t~~----~n~~~~~aa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~-~g~ 387 (449)
T 2cjg_A 325 --------S-RLNSTWG----GNLTDMVRARRILEVIEAEGLF---ERAVQHGKYLRARLDELAADFPAVVLDPRG-RGL 387 (449)
T ss_dssp --------T-SSCCSSS----SCHHHHHHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHHHSTTTSEEEEE-ETT
T ss_pred --------c-ccccCCC----CCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCceeeEee-ccE
Confidence 0 0001122 2333444455566655444443 44556788888888763 33 21 222 132
Q ss_pred eeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 789 VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 789 ~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+ +.++++. ..+..++.++|.++|+.+.... .+++|++|+..+|++|||++++.|+++++++
T Consensus 388 ~---~~~~~~~-----~~~~~~~~~~l~~~Gv~v~~~g---~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 388 M---CAFSLPT-----TADRDELIRQLWQRAVIVLPAG---ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp E---EEEECSS-----HHHHHHHHHHHHHTTEECEEET---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred E---EEEEECC-----hHHHHHHHHHHHHCCeEEecCC---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 3456541 1235689999999999875332 4799999999999999999999999987653
No 262
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.68 E-value=1.2e-15 Score=173.68 Aligned_cols=278 Identities=15% Similarity=0.132 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+|+++|.+ ++.++.+||.++++++.++... +||+|+++...|+++...++. .|++++.++.+
T Consensus 57 ~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~~~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 128 (391)
T 3dr4_A 57 FIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMGIG--PGDEVIVPSLTYIASANSVTY----CGATPVLVDNDPR 128 (391)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHTCC--TTCEEEEESSSCTHHHHHHHH----TTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCchHHHHHHHHH----CCCEEEEEecCcc
Confidence 3567889999999987 5788999998888777766433 789999999999999888753 58888887653
Q ss_pred -------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC---CCCccceEEEec--c
Q 002263 178 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGS--A 244 (946)
Q Consensus 178 -------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~---~~~~GaDi~v~s--~ 244 (946)
++++ +++++++|+++ |.+|.+.|+++|.++|+++|+++++|. ..+.+.... .+.+ .|+++.| .
T Consensus 129 ~~~~d~~~l~~~~~~~~~~v~~~--n~tG~~~~~~~i~~l~~~~~~~li~D~-a~~~g~~~~~~~~~~~-~di~~~S~s~ 204 (391)
T 3dr4_A 129 TFNLDAAKLEALITPRTKAIMPV--HLYGQICDMDPILEVARRHNLLVIEDA-AEAVGATYRGKKSGSL-GDCATFSFFG 204 (391)
T ss_dssp TCSBCGGGSGGGCCTTEEEECCB--CGGGCCCCHHHHHHHHHHTTCEEEEEC-TTCTTCEETTEETTSS-SSEEEEECBT
T ss_pred ccCcCHHHHHHhcCCCceEEEEE--CCCCChhhHHHHHHHHHHcCCEEEEEC-cccccceECCeeeccc-CCEEEEECCC
Confidence 4555 67889988864 478999999999999999999999953 334443211 2333 3676666 5
Q ss_pred -ccccccCCCCCCceEEEEEch-hhhhcCCCce-EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 245 -QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRI-VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 245 -k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~~-~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|.|++ +..|++.+++ ++.+.+.... .|.+.+ .. |.. ...+ .|.. ... +.+++
T Consensus 205 ~K~l~~------g~gg~~~~~~~~~~~~~~~~~~~g~~~~---~~-~~~----------~~~g-~~~~-~~~---l~aa~ 259 (391)
T 3dr4_A 205 NAIITT------GEGGMITTNDDDLAAKMRLLRGQGMDPN---RR-YWF----------PIVG-FNYR-MTN---IQAAI 259 (391)
T ss_dssp TSSSCC------BSCEEEEESCHHHHHHHHHHHBTTCCTT---ST-TCC----------SSCC-CBCB-CCH---HHHHH
T ss_pred CCcCCc------CCeEEEEECCHHHHHHHHHHHhcCCCCC---Cc-ccc----------cccc-cccC-CCH---HHHHH
Confidence 55532 2356776664 3544432111 010000 00 100 0011 1111 112 22222
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-------CCcCeEEEecC---C--HHHHHHHHHHcCCeeee
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-------PFFDTVKVKCA---D--AHAIASAAYKIEMNLRV 389 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-------~~~~~~~i~~~---~--~~~v~~~L~~~GI~~~~ 389 (946)
.+...++++++.++..++++++++.|+++| +++... ..+..+.+..+ + ..++.+.|.++||.++.
T Consensus 260 --~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~ 336 (391)
T 3dr4_A 260 --GLAQLERVDEHLAARERVVGWYEQKLARLG-NRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRP 336 (391)
T ss_dssp --HHHHHHTHHHHHHHHHHHHHHHHHHHGGGT-TSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEE
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-ccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceee
Confidence 222245778888999999999999999885 666532 12223445443 2 78999999999998753
Q ss_pred ec------------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 VD------------------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ~~------------------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.. ...+|++++..+|++||++++++|..
T Consensus 337 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 388 (391)
T 3dr4_A 337 VFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQ 388 (391)
T ss_dssp CCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred cCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 21 25699999999999999999999974
No 263
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.68 E-value=2.9e-16 Score=180.36 Aligned_cols=243 Identities=17% Similarity=0.150 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHhCCCCcceEE---cccHHHHHHHHHHHhccccCCCCEEEEcC-CCCHHHHHHH-------HHhhcCCCe
Q 002263 101 LLNFQTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS-NCHPQTIDIC-------ITRADGFDI 169 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl---~~~~Ta~~ea~~la~~~~~~~gd~vvv~~-~~Hps~~~~~-------~~~a~~~gi 169 (946)
..++++.+|+++|++.+ .+ +.+||+++.+++.++. . +||+||+++ ..|+.....+ ...++..|+
T Consensus 75 ~~~Le~~lA~l~g~e~a--lv~p~~~sGt~Ai~~al~all-~--pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~ 149 (427)
T 3i16_A 75 RDSLDAVYARVFNTESA--LVRPHFVNGTHALGAALFGNL-R--PGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGI 149 (427)
T ss_dssp HHHHHHHHHHHHTCSEE--EEETTCCSHHHHHHHHHHHHC-C--TTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTC
T ss_pred HHHHHHHHHHHhCCcce--EEeCCCccHHHHHHHHHHHHh-C--CCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCC
Confidence 45567899999999874 44 7889988777766652 3 899999999 8998877665 122345799
Q ss_pred EEEEecc--------ccccc-cC--CCEeEEEEEc----C-CCceeecchHHHHHHHHh--CCcEEEEEecCccccC-CC
Q 002263 170 KVVVSDL--------KDIDY-KS--GDVCGVLVQY----P-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTI-LK 230 (946)
Q Consensus 170 ~v~~~~~--------~~l~~-i~--~~t~~v~v~~----p-n~~G~i~di~~i~~~a~~--~gal~~v~a~~~al~~-l~ 230 (946)
+++.+|+ +++++ ++ ++|++|++++ | |.+|.+.|+++|+++||+ +|++++|| +.++.+. ..
T Consensus 150 ~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD-~a~~~~~~~~ 228 (427)
T 3i16_A 150 NYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVD-NCYGEFMDTK 228 (427)
T ss_dssp EEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEE-CTTTTTSSSS
T ss_pred EEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEE-CCCccccccC
Confidence 9999876 34555 65 7899999998 7 679999999999999999 99999995 3445544 35
Q ss_pred CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCcc
Q 002263 231 PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 309 (946)
Q Consensus 231 ~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~ 309 (946)
.|.++|+|++++|. |.|+++ |.|.+|++++++++++++..++. .+ .+...-+ +..
T Consensus 229 ~p~~~gaDiv~~S~sK~lgg~---g~~~gG~i~~~~~li~~l~~~~~--------~~-----------~~g~~~~-~~~- 284 (427)
T 3i16_A 229 EPTDVGADLIAGSLIKNIGGG---IAPTGGYLAGTKDCIEKTSYRLT--------VP-----------GIGGECG-STF- 284 (427)
T ss_dssp CGGGGTCSEEEEETTSGGGTT---TCCSCEEEEECHHHHHHHHHHHS--------CT-----------TTGGGCC-CCT-
T ss_pred CccccCCeEEEecCcccCCCC---CCceEEEEEECHHHHHHHHHhcc--------cC-----------ccCccCC-ccH-
Confidence 66789999999998 777531 22667999999988877632110 00 0000000 000
Q ss_pred chHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---CcC-eEEEecCC---HHHHHHHHHH
Q 002263 310 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFD-TVKVKCAD---AHAIASAAYK 382 (946)
Q Consensus 310 t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~~-~~~i~~~~---~~~v~~~L~~ 382 (946)
. +.++.+.|-+-+....++..+++.++++.|+++| +++...+ ..+ .+.|.+.+ +.++.+.|..
T Consensus 285 --~-------~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g-~~V~p~~~~~~~~~i~~i~l~~~~~~~~f~~~l~~ 354 (427)
T 3i16_A 285 --G-------VVRSMYQGLFLAPHISMEALKGAILCSRIMELAG-FEVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQT 354 (427)
T ss_dssp --T-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEESCTTSCCSSSCEEEECSSHHHHHHHHHHHHH
T ss_pred --H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCCCCCccEEEEEEECCHHHHHHHHHHHhh
Confidence 0 0011222223345567788899999999999998 7775321 111 34454444 4566666666
Q ss_pred c
Q 002263 383 I 383 (946)
Q Consensus 383 ~ 383 (946)
.
T Consensus 355 ~ 355 (427)
T 3i16_A 355 G 355 (427)
T ss_dssp T
T ss_pred c
Confidence 4
No 264
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.68 E-value=5.3e-16 Score=181.00 Aligned_cols=308 Identities=19% Similarity=0.253 Sum_probs=184.1
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCE---EEEcCCCC-CCCHHHHHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNV---CIIPVSAH-GTNPATAAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~---Ili~~saH-g~~~~~a~~~G~~vv~v~~ 597 (946)
..++++++++++|.+.+ +.+++|++++..++.+++.++..+| ++ |+++ ..| +++...+...|.+++.++.
T Consensus 78 ~~~l~~~la~~~~~~~v-~~t~ggt~A~~~al~~~~~~~~~~G----d~~~~viv~-~~~~~~~~~~~~~~g~~~~~~~~ 151 (467)
T 1ax4_A 78 YYDLKDKAKELFNYDYI-IPAHQGRGAENILFPVLLKYKQKEG----KAKNPVFIS-NFHFDTTAAHVELNGCKAINIVT 151 (467)
T ss_dssp HHHHHHHHHHHHCCCEE-EEESSHHHHHHHHHHHHHHHHHHTT----CCSSCEEEE-SSCCHHHHHHHHHTTCEEEECBC
T ss_pred HHHHHHHHHHHcCCCcE-EEcCCcHHHHHHHHHHHHHhhccCC----CccceEEEe-ccccchhhHHHhccCCceecccc
Confidence 45788999999998654 5567788777766666654332244 44 7777 555 4445567788999887754
Q ss_pred CC----------CCCCCHHHHHHHHHhcC-CCeEEEEEeCCC-cc-cccc--cCHHHHHHHHHHcCCEEEEeccccc--c
Q 002263 598 DA----------KGNINIEELRKAAEANR-DNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMN--A 660 (946)
Q Consensus 598 ~~----------~g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn-~~-G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~--a 660 (946)
+. ++.+|+++|++++++++ ++|++|++++|+ .+ |.+- .++++|+++|++||+++|+|+++.. +
T Consensus 152 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~ 231 (467)
T 1ax4_A 152 EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENA 231 (467)
T ss_dssp GGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH
T ss_pred cccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcc
Confidence 21 46799999999998532 379999999984 56 6652 2589999999999999999998643 1
Q ss_pred ---------cccccCCCc------cCCCEEEeCCCcccccCCCCCCCcceeEEEe-c-ccCCCCCCCccccCCCCCCCCC
Q 002263 661 ---------QVGLTSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-K-HLAPFLPSHPVVSTGGIPAPEK 723 (946)
Q Consensus 661 ---------~~gl~~pg~------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~-~l~~~lp~~~v~~~~d~~~~~~ 723 (946)
..+. .+.+ ..+|++++++||+|+.|. .|+++.+ + ++.+.+....... .
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~s~sK~~g~~~------Gg~~~~~d~~~l~~~~~~~~~~~-~------- 296 (467)
T 1ax4_A 232 YFIKARDPKYKNA-TIKEVIFDMYKYADALTMSAKKDPLLNI------GGLVAIRDNEEIFTLARQRCVPM-E------- 296 (467)
T ss_dssp HHHHHHCGGGTTC-CHHHHHHHHGGGCSEEEEETTSTTCCSS------CEEEEESSCHHHHHHHHHHHHHH-T-------
T ss_pred hhccccccccCCC-chhhhhhhhccccceEEEeccccCCCCc------ceEEEeCCHHHHHHHHHhhcccc-c-------
Confidence 1111 1122 247999999999885431 2677766 5 5543321000000 0
Q ss_pred CCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccc--
Q 002263 724 SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL-- 800 (946)
Q Consensus 724 ~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~-- 800 (946)
+.....+. ....+......+..+-.+ +..++...+++++.+.|++. +.+. .+.+.. -+.++...+
T Consensus 297 --~~~~~~~~---~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~--~~~~~~~~~~~ 364 (467)
T 1ax4_A 297 --GFVTYGGL---AGRDMAAMVQGLEEGTEE---EYLHYRIGQVKYLGDRLREAGIPIQ--YPTGGH--AVFVDCKKLVP 364 (467)
T ss_dssp --CSTTTTTC---CHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHTTCCBC--SSCCSS--EEEEESTTTCT
T ss_pred --cccccCCc---cchHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHHHHHhCCCCcc--cCCCce--EEEEehhhhcc
Confidence 00000000 011111111123222111 12223346778899999763 3432 222211 244552110
Q ss_pred -cccCCCCHHHHHHHH-HHCCcccCC-CC--C---C--------CCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 801 -KNTAGIEPEDVAKRL-MDYGFHGPT-MS--W---P--------VPGTLMIEPT-ESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 801 -~~~~g~~~~~i~~~L-~~~Gi~~~~-~~--~---p--------~~~~lri~~t-~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
....+.+..++.++| .++|+.+.. -. + | ..+.+|++++ ..+|++|+|++++.|++++++.+.
T Consensus 365 ~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~~ 443 (467)
T 1ax4_A 365 QIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFAT 443 (467)
T ss_dssp TSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHTT
T ss_pred ccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhhc
Confidence 000134578899999 889998632 10 0 1 1278999998 448999999999999999887554
No 265
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.68 E-value=1.4e-15 Score=175.30 Aligned_cols=354 Identities=13% Similarity=0.112 Sum_probs=206.9
Q ss_pred CHHHHHHHHHHHHcCccCcCCccccceeeecC---CCcc--ccccccc-----Cc-cccccCCCCcccccccHHHHHHHH
Q 002263 457 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMK---LNAT--TEMMPVT-----WP-SFANIHPFAPADQAQGYQEMFNNL 525 (946)
Q Consensus 457 se~e~~r~~~~l~~~~~~~~~~~~~lGs~~~~---~~~~--~~~~~~~-----~~-~f~~~~p~~p~e~~qG~~~~~~el 525 (946)
+...+.+.+.++..++ ..+.|+.+.+. ++.. +...... .+ ....|.+ .+|. .++
T Consensus 17 ~~~~~~~~~~~l~~~~-----~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~------~~G~----~~l 81 (422)
T 3d6k_A 17 VREEVTAKYAELKAKN-----LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGG------LLGI----ADI 81 (422)
T ss_dssp -CHHHHHHHHHHHHTT-----CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCC------SSCC----HHH
T ss_pred hHHHHHHHHHHHhccC-----CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCC------CCCC----HHH
Confidence 4456777788877653 24677776653 2221 1111110 11 1122332 2453 357
Q ss_pred HHHHHHhhCCCcccccCCchHH-HHHHHHHHHHHHHHhc---CCC-----CCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 526 GEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRAYHKAR---GDH-----HRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 526 ~~~la~l~G~~~~~l~~~sGa~-ge~a~l~a~r~y~~~~---G~~-----~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
++.+++++|.+...+..++|++ +. ...++++.+. .. |.. .+++|+++...|..+...++..|++++.+|
T Consensus 82 r~~ia~~~~~~~~~i~~t~G~~~al-~l~~~~~~l~-~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 159 (422)
T 3d6k_A 82 RELWAEALGLPADLVVAQDGSSLNI-MFDLISWSYT-WGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVP 159 (422)
T ss_dssp HHHHHHHHTCCGGGEEECSSCHHHH-HHHHHHHHHH-HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHhCCChhHEEEecchHHHH-HHHHHHHHhc-CcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecC
Confidence 7788888888765555555543 32 1012233332 21 100 134799988877666667888999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEE-EeCC-Cccccccc--CHHHHHHHHH-HcCCEEEEeccccc-cccc----ccC
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLM-VTYP-STHGVYEE--GIDEICKIIH-DNGGQVYMDGANMN-AQVG----LTS 666 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vv-vt~P-n~~G~~~~--~i~~I~~ia~-~~g~ll~vD~a~~~-a~~g----l~~ 666 (946)
++++| +|+++|++++++ .++++|+ +.+| |.+|.+.+ .+++|+++|+ ++|+++++|.++.. .+.. +..
T Consensus 160 ~~~~g-~d~~~l~~~l~~--~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 236 (422)
T 3d6k_A 160 MTDEG-PDMGVVRELVKD--PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHN 236 (422)
T ss_dssp EETTE-ECHHHHHHHHTS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCC
T ss_pred CCCCC-CCHHHHHHHHhc--CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcC
Confidence 98776 999999999962 3788888 5677 46898862 3458888888 99999999998742 1211 001
Q ss_pred C-------CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhh
Q 002263 667 P-------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 739 (946)
Q Consensus 667 p-------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~ 739 (946)
. +..+.++++.+++|+ .. .|.++|++++++++.+.+.... .....+.+ ..
T Consensus 237 ~~~~~~~~~~~~~~i~~~S~SK~-~~----~GlriG~~~~~~~l~~~l~~~~--------------~~~~~~~~----~~ 293 (422)
T 3d6k_A 237 VIEFAQAAGNPNRFWFMSSTSKI-TH----AGSGVSFFASSKENIEWYASHA--------------NVRGIGPN----KL 293 (422)
T ss_dssp HHHHHHHTTCTTCEEEEEESTTT-SC----TTSSCEEEECCHHHHHHHHHHH--------------HHHCSCCC----HH
T ss_pred hhhHhhccCCCCcEEEEcChhhh-cC----cccceEEEEeCHHHHHHHHHHH--------------HhhcCCCC----HH
Confidence 1 123456778889997 43 3678999999877655432100 00011111 11
Q ss_pred HHHHHHHHHHHHc--HhhHHHHHHHHHHHHHHHHHHHhcc---CC-eeeccCCCceeeeEEEecccccccCCCCHHHHHH
Q 002263 740 ILPISYTYIAMMG--SKGLTEASKIAILNANYMAKRLEKH---YP-ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 813 (946)
Q Consensus 740 ~~~~a~a~l~~lG--~eGl~~~~~~~~~~a~~l~~~L~~~---~~-v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~ 813 (946)
...++.+++...+ .+-+++..+....+.+++.+.|.+. .. +.+..+.+..+ +.++++. .+..++.+
T Consensus 294 ~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~--~~~~~~~------~~~~~~~~ 365 (422)
T 3d6k_A 294 NQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYF--ISVDVVP------GTASRVVE 365 (422)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSC--EEEEEST------TCHHHHHH
T ss_pred HHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceE--EEEECCC------CCHHHHHH
Confidence 1122223332111 1223344444445666777777652 11 22212222222 4556542 25678889
Q ss_pred HHHHCCcccCC--CCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 814 RLMDYGFHGPT--MSWP-----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 814 ~L~~~Gi~~~~--~~~p-----~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.|.++||.+.. ..|+ ..+++||+++. .++++++++++.|+++++++..
T Consensus 366 ~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 366 LAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHHHHh
Confidence 99999998754 2243 24789999987 7899999999999999877643
No 266
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.68 E-value=1.4e-14 Score=164.41 Aligned_cols=323 Identities=12% Similarity=0.042 Sum_probs=201.3
Q ss_pred HHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhCC--CCc-
Q 002263 42 IEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL--PMS- 117 (946)
Q Consensus 42 ~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~--~~~- 117 (946)
.+.+.+++.... +. .++.|..+...|+.+.+.+.+... ....|++. +|..+.-..+.+.+.+++|. ++.
T Consensus 20 ~~~~~~~~~~~~-~i-~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~g~~~l~~~la~~l~~~~g~~~~~~~ 92 (386)
T 1u08_A 20 FTQMSALAQQHQ-AI-NLSQGFPDFDGPRYLQERLAHHVAQGANQYAPM-----TGVQALREAIAQKTERLYGYQPDADS 92 (386)
T ss_dssp HHHHHHHHHHTT-CE-ECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCT-----TCCHHHHHHHHHHHHHHHSCCCCTTT
T ss_pred HHHHHHHHhcCC-eE-EecCCCCCCCCCHHHHHHHHHHHHhhccCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 344444444332 22 235555454466666555443111 02234332 22222222222333344574 455
Q ss_pred ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc-cCCCEe
Q 002263 118 NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDVC 187 (946)
Q Consensus 118 ~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~-i~~~t~ 187 (946)
++.+++|+|.+++.++.++. . +||+|+++...|+++...++ ..|.+++.++. ++|++ ++++++
T Consensus 93 ~v~~~~g~~~a~~~~~~~~~-~--~gd~vl~~~p~~~~~~~~~~----~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~ 165 (386)
T 1u08_A 93 DITVTAGATEALYAAITALV-R--NGDEVICFDPSYDSYAPAIA----LSGGIVKRMALQPPHFRVDWQEFAALLSERTR 165 (386)
T ss_dssp TEEEESSHHHHHHHHHHHHC-C--TTCEEEEEESCCTTHHHHHH----HTTCEEEEEECCTTTCCCCHHHHHHHCCTTEE
T ss_pred CEEEcCChHHHHHHHHHHhC-C--CCCEEEEeCCCchhHHHHHH----HcCCEEEEeecCcccCcCCHHHHHHhhcccCE
Confidence 89899999988887776652 3 78999999999998887654 35777777654 34555 677899
Q ss_pred EEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCC-----CCCC----CccceEEEecc-ccccccCCC
Q 002263 188 GVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL-----KPPG----ELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 188 ~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~----~~GaDi~v~s~-k~lg~P~~~ 253 (946)
+|++++| |.+|.+. ++++|+++|+++|+++++|. ..+.... .+.. ..+.|++++|. |.|+.|
T Consensus 166 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~--- 241 (386)
T 1u08_A 166 LVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDE-VYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMT--- 241 (386)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEEC-TTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCG---
T ss_pred EEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEc-cccccccCCCCCcChhcccCccCcEEEEecchhhcCCc---
Confidence 9999988 6799987 47999999999999999953 3222111 0111 35789999998 776422
Q ss_pred CCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 254 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 254 GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
|-.+|++++++++.+.+... .+ ....+.|. ....++.++ +. .+.+.+++
T Consensus 242 -G~r~G~~~~~~~~~~~l~~~----------------------~~--~~~~~~~~---~~~~a~~~~--l~-~~~~~~~~ 290 (386)
T 1u08_A 242 -GWKVGYCVAPAPISAEIRKV----------------------HQ--YLTFSVNT---PAQLALADM--LR-AEPEHYLA 290 (386)
T ss_dssp -GGCCEEEECCHHHHHHHHHH----------------------HH--HHTSSCCH---HHHHHHHHH--HH-HCTHHHHT
T ss_pred -ccceEEEEcCHHHHHHHHHH----------------------HH--hhccCCCh---HHHHHHHHH--Hh-CCcHHHHH
Confidence 22379999988876654100 00 00011111 111122222 23 23667888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC-----CHHHHHHHHH-HcCCeeeee--------cCCeEEEEe
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-----DAHAIASAAY-KIEMNLRVV--------DSNTVTASF 399 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-----~~~~v~~~L~-~~GI~~~~~--------~~~~lris~ 399 (946)
+.++..++.+++.+.|+++| +++.......-+.+.++ +..++.++|. ++||.+... .++.+|+|+
T Consensus 291 ~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~ 369 (386)
T 1u08_A 291 LPDFYRQKRDILVNALNESR-LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF 369 (386)
T ss_dssp HHHHHHHHHHHHHHHTTSSS-CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHCC-CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEE
Confidence 99999999999999999987 88764321123445543 2678888886 679987542 246899999
Q ss_pred ccCCCHHHHHHHHHHHh
Q 002263 400 DETTTLEDVDKLFIVFA 416 (946)
Q Consensus 400 ~~~~t~edid~ll~~l~ 416 (946)
. +++++|+++++.|+
T Consensus 370 ~--~~~~~i~~~~~~l~ 384 (386)
T 1u08_A 370 A--KKESTLLAAAERLR 384 (386)
T ss_dssp C--SCHHHHHHHHHHHT
T ss_pred c--CCHHHHHHHHHHHh
Confidence 7 48999999999986
No 267
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.68 E-value=1.1e-15 Score=173.89 Aligned_cols=285 Identities=13% Similarity=0.153 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+|+++|.+ ++.++.+||.+++.++.+++.. +||+|+++...|+++...++ ..|++++.+++
T Consensus 40 ~~~~l~~~la~~~~~~--~~~~~~~gt~al~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~ 111 (393)
T 1mdo_A 40 KNQELEAAFCRLTGNQ--YAVAVSSATAGMHIALMALGIG--EGDEVITPSMTWVSTLNMIV----LLGANPVMVDVDRD 111 (393)
T ss_dssp HHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCHHHHHHHH----HTTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhCCC--cEEEecChHHHHHHHHHHcCCC--CCCEEEeCCCccHhHHHHHH----HCCCEEEEEeccCC
Confidence 3557888999999986 5888999998888877766333 78999999999999988764 35888888764
Q ss_pred ------ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCcc-ceEEEecc---c
Q 002263 177 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELG-ADIVVGSA---Q 245 (946)
Q Consensus 177 ------~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~G-aDi~v~s~---k 245 (946)
+++++ +++++++|++++ .+|.+.|+++|.++|+++|+++++|. ..+.+.......+| .|+++.|. |
T Consensus 112 ~~~~d~~~l~~~l~~~~~~v~~~~--~~G~~~~~~~i~~l~~~~~~~li~D~-a~~~g~~~~~~~~~~~d~~~~S~~k~K 188 (393)
T 1mdo_A 112 TLMVTPEHIEAAITPQTKAIIPVH--YAGAPADLDAIYALGERYGIPVIEDA-AHATGTSYKGRHIGARGTAIFSFHAIK 188 (393)
T ss_dssp TCCBCHHHHHHHCCTTEEEECCBC--GGGCCCCHHHHHHHHHHHTCCBCEEC-TTCTTCEETTEETTSSSEEEEECCTTS
T ss_pred cCCCCHHHHHHhcCCCceEEEEeC--CCCCcCCHHHHHHHHHHcCCeEEEEC-ccccCCeECCeecCCCCeEEEeCCCCC
Confidence 23555 677899988875 58999999999999999999999943 34443222222356 89999986 3
Q ss_pred cccccCCCCCCceEEEEEc-hhhhhcCCCc-eEeEeecCCCCcceEEeccccccccccc---ccC-CCccchHHHHHHHH
Q 002263 246 RFGVPMGYGGPHAAFLATS-QEYKRMMPGR-IVGVSIDSSGKPALRVAMQTREQHIRRD---KAT-SNICTAQALLANMA 319 (946)
Q Consensus 246 ~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~-~~G~s~d~~g~~~~~l~l~tre~~irre---~aT-sni~t~~~l~a~~a 319 (946)
.+ +|+.+|++.++ +++.+.+... ..|...+.. .+ | ++ ....+.+ .|+ .++ ..+.+..+
T Consensus 189 ~l------~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~-~~-~---~~--~~~~~~~~~~~g~~~~~---~~~~~a~~ 252 (393)
T 1mdo_A 189 NI------TCAEGGIVVTDNPQFADKLRSLKFHGLGVDAW-DR-Q---SG--GRAPQAEVLAPGYKYNL---PDLNAAIA 252 (393)
T ss_dssp SS------CSSSCEEEEESCHHHHHHHHHHTBTTEECC------------------CCEESSCCCBCCC---CHHHHHHH
T ss_pred cc------ccccceEEEeCCHHHHHHHHHHHhcCCcccch-hh-h---cc--cccccccccccCccCCC---CHHHHHHH
Confidence 33 22346888886 6665544211 111111100 00 0 00 0001111 222 112 12211111
Q ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC------CcCeEEEecC----C--HHHHHHHHHHcCCee
Q 002263 320 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFDTVKVKCA----D--AHAIASAAYKIEMNL 387 (946)
Q Consensus 320 a~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~------~~~~~~i~~~----~--~~~v~~~L~~~GI~~ 387 (946)
. . ..++++++.++..++++++++.|++++ +++...+ ....+.+.++ + ..++.+.|.++||.+
T Consensus 253 ~---~--~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v 326 (393)
T 1mdo_A 253 L---A--QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGT 326 (393)
T ss_dssp H---H--HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCC
T ss_pred H---H--HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCc
Confidence 1 1 124577888888899999999999988 8875321 1223556554 2 788999999999977
Q ss_pred eeec-------------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 388 RVVD-------------------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 388 ~~~~-------------------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+... ...+|++++.++|++|+++++++|..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 381 (393)
T 1mdo_A 327 GLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQ 381 (393)
T ss_dssp BCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 5421 23699999999999999999999963
No 268
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.68 E-value=1e-15 Score=173.77 Aligned_cols=299 Identities=12% Similarity=0.010 Sum_probs=182.9
Q ss_pred HHHHHHHH-HHhhC-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 522 FNNLGEWL-CTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 522 ~~el~~~l-a~l~G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
..++++.+ ++++| .+. .+.+++|+.+...+ ++.. +.+++++||++...|.++...+...|++++.+++++
T Consensus 38 ~~~l~~~~~a~~~g~~~~-~v~~~sgt~al~~a---l~~l----~~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~ 109 (377)
T 3ju7_A 38 NQRFEQTIMSGFFQNRGA-VTTVANATLGLMAA---IQLK----KRKKGKYALMPSFTFPATPLAAIWCGLEPYFIDISI 109 (377)
T ss_dssp HHHHHHHHHHHTSTTCSE-EEEESCHHHHHHHH---HHHH----SCTTCCEEEEESSSCTHHHHHHHHTTCEEEEECBCT
T ss_pred HHHHHHHHHHHHhCCCCe-EEEeCCHHHHHHHH---HHHc----CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCC
Confidence 56788999 99999 443 35666777665433 3332 123568999999988888888889999999999984
Q ss_pred -CCCCCHHHHHHHHHhcCCC--eEEEEEeCCCcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCcc---CCC
Q 002263 600 -KGNINIEELRKAAEANRDN--LSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI---GAD 673 (946)
Q Consensus 600 -~g~~D~e~L~~~i~~~~~~--t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~---GaD 673 (946)
++.+|+++|++++.. ++ |++|++++ .+|... |+++|+++|+ +|+++++|+++..+ ........ ..|
T Consensus 110 ~~~~~d~~~l~~~i~~--~~~~tk~v~~~~--~~G~~~-~~~~i~~la~-~~~~vi~D~a~a~g--~~~~~~~~g~~~~d 181 (377)
T 3ju7_A 110 DDWYMDKTVLWDKIEE--LKEEVAIVVPYA--TFGSWM-NLEEYEELEK-KGVPVVVDAAPGFG--LMNGGMHYGQDFSG 181 (377)
T ss_dssp TTCSBCHHHHHHHHHH--HGGGEEEECCBC--GGGBCC-CCHHHHHHHH-TTCCBEEECTTCTT--CEETTEETTTTCSS
T ss_pred ccCCcCHHHHHHHHhc--CCCCceEEEEEC--CCCCcc-CHHHHHHHHh-cCCEEEEECCCccC--CeECCEeccCCCCc
Confidence 689999999999832 45 99888654 468887 7999999999 99999999987522 11111122 257
Q ss_pred EEEeC--CCcccccCCCCCCCcceeEEEec-ccCCCCCC-CccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 674 VCHLN--LHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 674 i~~~s--~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~-~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
+.++| .||+|+ + +..|++++++ ++.+.+.. +..|....+. ....+ .+... +...+ +.-+.
T Consensus 182 ~~~~S~~~~K~l~-----~-g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~--~~~~g-~~~~~----~~~~a---a~~~~ 245 (377)
T 3ju7_A 182 MIIYSFHATKPFG-----I-GEGGLIYSKNEEDIQRIKRMGNFGFDTNRE--CTMMG-FNCKM----SEYAA---AIGIA 245 (377)
T ss_dssp EEEEECBTTSSSC-----C-BSCEEEEESCHHHHHHHHHHTBTTBCTTSC--BCSSC-CBCCC----CHHHH---HHHHH
T ss_pred EEEEECCCCCcCC-----C-CCcEEEEECCHHHHHHHHHHHhcCCCCCCc--eeecc-ccCCC----CHHHH---HHHHH
Confidence 77666 468874 1 2346666653 33322210 0011100000 00000 01111 11111 11111
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhccC--Ceeecc-CCCceeee-EEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKHY--PILFRG-VNGTVAHE-FIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 825 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~~--~v~~~~-~~~~~~~e-~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~ 825 (946)
+-+.+.+..++...+++++.+.|++.- .+.+.. ......|. +.+.++ .+.+.+++.++|.++||.+...
T Consensus 246 --~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L~~~gI~~~~~ 318 (377)
T 3ju7_A 246 --TMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCP-----EEVRNKQVIEDLKKQKIEARLY 318 (377)
T ss_dssp --HHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECC-----TTSCHHHHHHHHHTTTBCCBCT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeC-----ChhhHHHHHHHHHHCCCceecc
Confidence 224556666777788889999998752 121111 11112222 234433 1235889999999999976432
Q ss_pred CC-C----------------C-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 826 SW-P----------------V-----PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 826 ~~-p----------------~-----~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+. | + ...|++.+....|++|+++++++|++++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 319 FSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp TSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred cCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 21 1 0 257899888889999999999999877654
No 269
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.68 E-value=2.4e-16 Score=177.19 Aligned_cols=296 Identities=10% Similarity=0.049 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHhhCCCc--cccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEE--EEcCCCCCCCHHH--HHHcCC
Q 002263 518 YQEMFNNLGEWLCTITGFDS--FSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVC--IIPVSAHGTNPAT--AAMCGM 590 (946)
Q Consensus 518 ~~~~~~el~~~la~l~G~~~--~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~I--li~~saHg~~~~~--a~~~G~ 590 (946)
..+++.+.++.+++++|.+. ..++ +.+|+.+. -++++.+. + ++++ ++. +.+ +++.. ++..|+
T Consensus 48 ~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~---n~~~~~~~--~----~~~~~~i~~-~~~-~~~~~~~a~~~G~ 116 (361)
T 3m5u_A 48 FEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF---AMIPMNLA--L----NGVCEYANT-GVW-TKKAIKEAQILGV 116 (361)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH---HHHHHHHC--C----SSCEEEEEC-SHH-HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH---HHHHHhcC--C----CCeEEEEeC-CHH-HHHHHHHHHHcCC
Confidence 56789999999999999963 2233 45555444 34444432 2 2333 332 223 34432 556799
Q ss_pred EEEEEcCCCCCC--CCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCC
Q 002263 591 KIVSVGTDAKGN--INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 667 (946)
Q Consensus 591 ~vv~v~~~~~g~--~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~p 667 (946)
+++.++++++|. +++++ + |+ ++|++|++++. |.+|++.++ | ++ +|++++||+++..+...+ ..
T Consensus 117 ~v~~~~~~~~g~~~~~~~~-~--l~---~~t~lv~~~~~e~~tG~~~~~---i---~~-~~~~~~vD~~q~~g~~~i-d~ 182 (361)
T 3m5u_A 117 NVKTVASSEESNFDHIPRV-E--FS---DNADYAYICSNNTIYGTQYQN---Y---PK-TKTPLIVDASSDFFSRKV-DF 182 (361)
T ss_dssp CEEEEEECTTTTSCSCCCC-C--CC---TTSSEEEEESEETTTTEECSS---C---CC-CSSCEEEECGGGTTSSCC-CC
T ss_pred ceEEEecccCcCCCcCChh-h--cC---CCCCEEEEeCCCCCcceeCCc---c---cc-cCCEEEEEcccccCCCCC-Cc
Confidence 999999988874 57766 3 64 78988888876 458998633 3 33 499999999875322211 11
Q ss_pred CccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCC---CCCCCCCCCCcccCccchhhHHHHH
Q 002263 668 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---APEKSQPLGTIAAAPWGSALILPIS 744 (946)
Q Consensus 668 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~---~~~~~~~~~~i~~~~~g~~~~~~~a 744 (946)
..+|+++++.||+++ | ||+|++++++++.+.++........++. ..+....|.++. .+...
T Consensus 183 --~~~d~~~~s~~K~~g-p-----~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~--------~i~~l 246 (361)
T 3m5u_A 183 --SNIALFYGGVQKNAG-I-----SGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTF--------AIYMF 246 (361)
T ss_dssp --TTEEEEEEETTTTSS-C-----TTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHH--------HHHHH
T ss_pred --ccCCEEEEechhccC-C-----CccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHH--------HHHHH
Confidence 147999999999983 3 6899999998765333110000001110 011112333332 11222
Q ss_pred HHHHHHHcHh-hHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 002263 745 YTYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 821 (946)
Q Consensus 745 ~a~l~~lG~e-Gl~~~~~~~~~~a~~l~~~L~~~~~v--~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~ 821 (946)
.+.+.++-.+ |+.++.++...+++++.++|+++-.+ .+..+.....+.+.|.++.. .+.+ .++.+.|.++||.
T Consensus 247 ~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~---~~~~-~~~~~~L~~~gI~ 322 (361)
T 3m5u_A 247 NLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKN---KDLE-PLFVKEAEEAGMI 322 (361)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSC---TTHH-HHHHHHHHHTTEE
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCc---hhhh-HHHHHHHHHCCCE
Confidence 3445555566 78888888999999999999875212 11111111112344554310 0123 4788899999998
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 822 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 822 ~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+..-... .+++|+++...+|++|||+|+++|+++.++
T Consensus 323 ~~~g~~~-~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 323 GLKGHRI-LGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp CCBCCTT-TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCc-cCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 6432211 267999999999999999999999998765
No 270
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.67 E-value=4.6e-15 Score=172.29 Aligned_cols=311 Identities=16% Similarity=0.153 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC------
Q 002263 519 QEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------ 590 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~------ 590 (946)
.+...++++.++++++.+.. .++.++|+++.++++.+++.|...+|..++++||+ ..+.|+....++...|.
T Consensus 92 ~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~ 171 (449)
T 3a8u_X 92 HPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKL 171 (449)
T ss_dssp CHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTT
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccc
Confidence 34566888999999875542 36677888888777777777766666545677876 56778887766655442
Q ss_pred ------EEEEEcCCCCC-----CCC--------HHHHHHHHHhcC-CCeEEEEEeCC-CcccccccC----HHHHHHHHH
Q 002263 591 ------KIVSVGTDAKG-----NIN--------IEELRKAAEANR-DNLSTLMVTYP-STHGVYEEG----IDEICKIIH 645 (946)
Q Consensus 591 ------~vv~v~~~~~g-----~~D--------~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia~ 645 (946)
.++.++++... .+| +++|++++++++ +++++|+++.. +.+|++. + +++|.++|+
T Consensus 172 ~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~-~~~~~l~~l~~l~~ 250 (449)
T 3a8u_X 172 FGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLV-PPEGYLKRNREICN 250 (449)
T ss_dssp TCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBC-CCTTHHHHHHHHHH
T ss_pred cCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCcc-CCHHHHHHHHHHHH
Confidence 34555543211 146 999999997543 46777766543 3478765 5 999999999
Q ss_pred HcCCEEEEecccccccccccCCC---c--cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCC
Q 002263 646 DNGGQVYMDGANMNAQVGLTSPG---Y--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 720 (946)
Q Consensus 646 ~~g~ll~vD~a~~~a~~gl~~pg---~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~ 720 (946)
+||+++++|+++. +++-..... . ...|++++ +|+|+ +|+.++|++++++++.+.+....... ..
T Consensus 251 ~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~di~s~--sK~l~----~G~~~~G~~~~~~~~~~~l~~~~~~~--~~-- 319 (449)
T 3a8u_X 251 QHNILLVFDEVIT-GFGRTGSMFGADSFGVTPDLMCI--AKQVT----NGAIPMGAVIASTEIYQTFMNQPTPE--YA-- 319 (449)
T ss_dssp HHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGG----TTSSCCEEEEEEHHHHHHHHTCSSCT--TS--
T ss_pred HhCCEEEEecccc-CccccCcchhhhhcCCCCCEEEE--ccccc----CCCCceEEEEECHHHHHHhhccCccc--cc--
Confidence 9999999999863 122111111 1 23688865 59884 22256888888877655432110000 00
Q ss_pred CCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeeEEEe
Q 002263 721 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVD 796 (946)
Q Consensus 721 ~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~--~~v~--~~~~~~~~~~e~v~~ 796 (946)
.......+.+ ++...++++.+.+..+..+++. ++...+.+++.++|++. +.+. ..+ .+.+ +.++
T Consensus 320 -~~~~~~~t~~----~~~~~~aa~~aal~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~---~~i~ 387 (449)
T 3a8u_X 320 -VEFPHGYTYS----AHPVACAAGLAALCLLQKENLV---QSVAEVAPHFEKALHGIKGAKNVIDIRN-FGLA---GAIQ 387 (449)
T ss_dssp -CSSCCCCTTT----TCHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHTTTTSTTEEEEEE-ETTE---EEEE
T ss_pred -ccccccCCCc----ccHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHhcCCCeEEEee-eEEE---EEEE
Confidence 0000001112 2333344455556655444443 44556778888888763 2221 111 1222 4455
Q ss_pred cccccccCCC--CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 797 LRGLKNTAGI--EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 797 ~~~~~~~~g~--~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.... ... +..++.++|.++|+.+... .+.+||+++...|++|+++++++|++++++
T Consensus 388 ~~~~~--~~~~~~~~~~~~~l~~~Gv~v~~~----g~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 388 IAPRD--GDAIVRPFEAGMALWKAGFYVRFG----GDTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp ECCBT--TBSSHHHHHHHHHHHHHTEECEEE----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EecCc--ccccccHHHHHHHHHHCCcEEecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 54210 001 2347999999999987532 378999999899999999999999998765
No 271
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.67 E-value=1.2e-14 Score=165.04 Aligned_cols=305 Identities=12% Similarity=0.101 Sum_probs=198.9
Q ss_pred CCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhC--CCCcceEEcccHHHHHHHHHHHhc
Q 002263 61 MGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNN 137 (946)
Q Consensus 61 ~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g--~~~~~~sl~~~~Ta~~ea~~la~~ 137 (946)
.|..+...|+.+.+.+.+... ....|+++. .+...++++.+++++| .++.++.+++|+|.++++++.++.
T Consensus 39 ~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-------~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~ 111 (391)
T 4dq6_A 39 VADMDFKAAPCIIDSLKNRLEQEIYGYTTRP-------DSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT 111 (391)
T ss_dssp SSSCSSCCCHHHHHHHHHHHTTCCCCCBCCC-------HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS
T ss_pred ccCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC
Confidence 343344566666555543211 122344433 3345566788999999 667789999999988887776652
Q ss_pred cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc------------cccc-cCCCEeEEEEEcC-CCceee---
Q 002263 138 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------------DIDY-KSGDVCGVLVQYP-GTEGEV--- 200 (946)
Q Consensus 138 ~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~------------~l~~-i~~~t~~v~v~~p-n~~G~i--- 200 (946)
. +||+|+++...|+++...++ ..|.+++.++.+ ++++ +++ +++|++.+| |.+|.+
T Consensus 112 -~--~gd~vl~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~ 183 (391)
T 4dq6_A 112 -K--ANDKIMIQEPVYSPFNSVVK----NNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTK 183 (391)
T ss_dssp -C--TTCEEEECSSCCTHHHHHHH----HTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCH
T ss_pred -C--CCCEEEEcCCCCHHHHHHHH----HcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCH
Confidence 2 78999999999999888765 358888876654 3444 666 999999998 679999
Q ss_pred cchHHHHHHHHhCCcEEEEEecCccccCCC-----CCCCcc-----ceEEEecc-ccccccCCCCCCceEEEEEch-hhh
Q 002263 201 LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYK 268 (946)
Q Consensus 201 ~di~~i~~~a~~~gal~~v~a~~~al~~l~-----~~~~~G-----aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~-~~~ 268 (946)
.++++|+++|+++|+++++|. ..+..... +...++ ..+++.|. |.|+.| |..+|++.+++ ++.
T Consensus 184 ~~l~~i~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----G~r~G~~~~~~~~~~ 258 (391)
T 4dq6_A 184 DELKKLGDICLKHNVKIISDE-IHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIA----GLQSSYVVLPDEKDY 258 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC-TTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCG----GGCCEEEECCSHHHH
T ss_pred HHHHHHHHHHHHcCCEEEeec-cccccccCCCCccCHHHcCccccCcEEEEEechhhccCc----ccceEEEEeCCHHHH
Confidence 789999999999999999953 22221111 112333 33888887 888533 33578888875 665
Q ss_pred hcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH
Q 002263 269 RMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALG 348 (946)
Q Consensus 269 ~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~ 348 (946)
+.+... + ++ ....+.|. ....+..+++ . .+.+.++++.++..++.+++.+.
T Consensus 259 ~~~~~~--------------------~-~~--~~~~~~~~---~~~~a~~~~l--~-~~~~~~~~~~~~~~~~~~~l~~~ 309 (391)
T 4dq6_A 259 KLLDDA--------------------F-TR--IDIKRNNC---FSLVATEASY--N-NGESWLESFLEYLESNIDFAIKY 309 (391)
T ss_dssp HHHHHH--------------------H-HH--TTCCCCCH---HHHHHHHHHH--H-HCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--------------------H-Hh--hcCCCCCH---HHHHHHHHHH--h-chHHHHHHHHHHHHHHHHHHHHH
Confidence 544100 0 00 00112221 1222222222 2 24455788899999999999999
Q ss_pred Hhc-CCCEEEcCCCCcCeEEEecC--C--HHHHHHHHHHc-CCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 349 LKK-LGTVEVQGLPFFDTVKVKCA--D--AHAIASAAYKI-EMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 349 L~~-~g~~~~~~~~~~~~~~i~~~--~--~~~v~~~L~~~-GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
|++ ++++++......-.+.+.++ + ..++.++|.++ ||.++.- .++.+|+|++ +++++++++++.|.
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~ 387 (391)
T 4dq6_A 310 INENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIK 387 (391)
T ss_dssp HHHHCTTSEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHH
T ss_pred HHhhCCCCEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHH
Confidence 988 53388764321111224443 2 78999999998 9988642 2478999998 68999999999886
No 272
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.67 E-value=2.7e-14 Score=161.45 Aligned_cols=322 Identities=13% Similarity=0.090 Sum_probs=202.5
Q ss_pred HHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC--ccccccCCChhhhhhhHHHHHHHHHHHHHHHh----C
Q 002263 40 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP--AWYTQYTPYQAEIAQGRLESLLNFQTMIADLT----G 113 (946)
Q Consensus 40 e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~--~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g 113 (946)
++.+...+..+.+..+.+| +.|.++...|+.+.+.+.+.. .....|.+ .+| ..++++.+|+++ |
T Consensus 12 ~~~~~~~~~~~~g~~~idl-~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~~----~~~l~~~ia~~~~~~~g 81 (376)
T 2dou_A 12 VVDEAKRKARERGVGLIDL-SIGSTDLPPPEAPLKALAEALNDPTTYGYCL-----KSC----TLPFLEEAARWYEGRYG 81 (376)
T ss_dssp HHHHHHHHHHHTTCCCEEC-SSCCCCCCCCHHHHHHHHHHTTCGGGSSCCC-----HHH----HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhccCCCEEec-cCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC-----CCC----CHHHHHHHHHHHHHHhC
Confidence 3334444443334444443 344444445666665555422 11223322 122 345666777776 8
Q ss_pred CC--Cc-ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-
Q 002263 114 LP--MS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 181 (946)
Q Consensus 114 ~~--~~-~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~- 181 (946)
.+ +. ++.+++|+|.+++.++.++. . +||+|+++...|+.+...++. .|.+++.++. +++++
T Consensus 82 ~~~~~~~~v~~~~g~~~a~~~~~~~l~-~--~gd~vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~d~~~l~~~ 154 (376)
T 2dou_A 82 VGLDPRREALALIGSQEGLAHLLLALT-E--PEDLLLLPEVAYPSYFGAARV----ASLRTFLIPLREDGLADLKAVPEG 154 (376)
T ss_dssp CCCCTTTSEEEESSHHHHHHHHHHHHC-C--TTCEEEEESSCCHHHHHHHHH----TTCEEEEECBCTTSSBCGGGSCHH
T ss_pred CCCCCCccEEEcCCcHHHHHHHHHHhc-C--CCCEEEECCCCcHhHHHHHHH----cCCEEEEeeCCCCCCCCHHHHHHh
Confidence 75 34 78899999988887766652 2 789999999999998877643 5888887764 34444
Q ss_pred cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC----CCC----CCccceEEEecc-cccc
Q 002263 182 KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPP----GELGADIVVGSA-QRFG 248 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l----~~~----~~~GaDi~v~s~-k~lg 248 (946)
+++++++|++++| |.+|.+.| +++|+++|+++|+++++|. ..+.... .+. +..+.+++++|. |.|+
T Consensus 155 l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 233 (376)
T 2dou_A 155 VWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDN-PYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYN 233 (376)
T ss_dssp HHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHT
T ss_pred hccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEc-cchhcccCCCCCChhhcCCCCCcEEEEecchhhcC
Confidence 5567899999888 67999875 7899999999999999943 3222111 111 234678888887 8775
Q ss_pred ccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhCh
Q 002263 249 VPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 328 (946)
Q Consensus 249 ~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~ 328 (946)
.| |..+|++++++++.+.+... + . ....+.|. ....+..+++ . .+.
T Consensus 234 ~~----G~r~G~~~~~~~~~~~l~~~--------------------~-~---~~~~~~~~---~~~~a~~~~l--~-~~~ 279 (376)
T 2dou_A 234 LA----GFRLGFALGSEEALARLERV--------------------K-G---VIDFNQYA---GVLRMGVEAL--K-TPK 279 (376)
T ss_dssp CG----GGCCEEEEECHHHHHHHHHH--------------------H-H---HHCCCSCH---HHHHHHHHHH--T-SCH
T ss_pred Ch----hheeEEEecCHHHHHHHHHH--------------------H-H---hcccCCCH---HHHHHHHHHH--h-CcH
Confidence 32 33478999988877655100 0 0 00011111 1111222211 2 235
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeeee------cCCeEEEEe
Q 002263 329 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV------DSNTVTASF 399 (946)
Q Consensus 329 ~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~------~~~~lris~ 399 (946)
+.++++.++..++.+++.+.|+++ +++.......-+.+.++. ..++.++|.++||.+... .++.+|+|+
T Consensus 280 ~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~ 357 (376)
T 2dou_A 280 EVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIAL 357 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEe
Confidence 678888889999999999999886 555432111123355542 678999999999988642 247899999
Q ss_pred ccCCCHHHHHHHHHHHhC
Q 002263 400 DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 400 ~~~~t~edid~ll~~l~~ 417 (946)
+. ++++++++++.|..
T Consensus 358 ~~--~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 358 VR--PLEELLEAAKRIRE 373 (376)
T ss_dssp CS--CHHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHH
Confidence 85 78999999998863
No 273
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.67 E-value=1.4e-15 Score=175.44 Aligned_cols=294 Identities=15% Similarity=0.151 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc-
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 178 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~- 178 (946)
...++++.+|+++|.+. +.++.+|++++.+++.++ .. +||+||+++..|+++...+...++..|++++.+|.++
T Consensus 83 ~~~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~al-~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~ 157 (430)
T 3ri6_A 83 TVEDLEQRLKNLTGALG--VLALGSGMAAISTAILTL-AR--AGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDS 157 (430)
T ss_dssp HHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHH-CC--TTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCH
T ss_pred HHHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCH
Confidence 34567899999999875 677888998887777665 23 8999999999999999877655566899999998754
Q ss_pred --ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 179 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 179 --l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+.+..+.++|+|+++.|. |.|++|
T Consensus 158 ~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD-~a~~~~~~~~~~~~g~div~~S~sK~l~g~--- 233 (430)
T 3ri6_A 158 LAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVD-TTMTPPYLLEAKRLGVDIEVLSSTKFISGG--- 233 (430)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEE-CTTSCTTTCCGGGGTCSEEEEECCCEEETT---
T ss_pred HHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCChHHcCCEEEEECCcccccCC---
Confidence 555 7889999999998 78999999999999999999999995 45566666677889999999998 877643
Q ss_pred CCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 254 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 254 GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
|..-+|++.++.+..-..+++.-.. .+..|...|...+ | ...++.-|. .. +++.+ |+...+.+.+..
T Consensus 234 g~~~gG~vv~~~~~~~~~~~~~~~l-~~~~g~~~~i~~~--~-~~~~~~~g~--~~--~~~~a-----~l~l~~l~~l~~ 300 (430)
T 3ri6_A 234 GTSVGGVLIDHGLFEWKSLPSLAPY-YAKAGPMAFLYKA--R-KEVFQNLGP--SL--SPHNA-----YLQSLGLETMAL 300 (430)
T ss_dssp EEECCEEEEECSCSCGGGSTTTHHH-HHHHGGGHHHHHH--H-HTHHHHHCC--CC--CHHHH-----HHHHHHHHHHHH
T ss_pred CCceEEEEEECChHHhhhccchhhh-hhhhchhhHHHHH--H-HHHHHhcCC--CC--CHHHH-----HHHHhhhhhHHH
Confidence 0012466664432100001110000 0000000000000 0 000111111 01 11111 122333445555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEc-CC-----C----------CcC-eEEEecCC---HHHHHHHHHHcCCeee-----
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVEVQ-GL-----P----------FFD-TVKVKCAD---AHAIASAAYKIEMNLR----- 388 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~~~-~~-----~----------~~~-~~~i~~~~---~~~v~~~L~~~GI~~~----- 388 (946)
..++..+++.++++.|++..+++-+ .+ + +.. .++|.+++ +.++.+.|.-.++.++
T Consensus 301 r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~ 380 (430)
T 3ri6_A 301 RIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNIHDNK 380 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSS
T ss_pred HHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCC
Confidence 6677789999999999987436532 21 1 012 67777765 4455555554333211
Q ss_pred -e---------------------ecCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 389 -V---------------------VDSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 389 -~---------------------~~~~~lris~~~~~t~edid~ll~~l 415 (946)
. +.++.||+|++.-+.++-+++|-++|
T Consensus 381 sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 381 SLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKEDILQAL 429 (430)
T ss_dssp CEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred ceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 0 13578999999777666666666665
No 274
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.67 E-value=4.7e-16 Score=180.23 Aligned_cols=312 Identities=13% Similarity=0.137 Sum_probs=183.1
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCC------CC----EEEEc-CCCCCC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHH------RN----VCIIP-VSAHGT 580 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~------~~----~Ili~-~saHg~ 580 (946)
.+|..++...+.+++.+..|.. ... +.+++|+++... +++.+. .+|..+ ++ +|+++ ...|..
T Consensus 82 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~---~~~~l~-~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~ 157 (444)
T 3if2_A 82 PQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFY---LFNLFG-GAFVNEHSQDKESKSVDKSILLPLTPEYIG 157 (444)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH---HHHHSS-EEEECC-------CEEEEEEEESSSSCCGG
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHH---HHHHHh-CCCccccccccccccccceEEEeCCCCccc
Confidence 3566666666666666666643 333 444555555533 333321 222100 01 67775 444444
Q ss_pred CHHH------HHHcCCEEEEEcCCC-CC----CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC---HHHHHHHHH
Q 002263 581 NPAT------AAMCGMKIVSVGTDA-KG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIH 645 (946)
Q Consensus 581 ~~~~------a~~~G~~vv~v~~~~-~g----~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~ 645 (946)
+... ....|.+++.+++++ +| .+|+++|++++++..+++++|++++|+ .+|.+. + +++|+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~a~ 236 (444)
T 3if2_A 158 YSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVL-TDEEMAHLAEIAK 236 (444)
T ss_dssp GTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHH
T ss_pred hhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcC-CHHHHHHHHHHHH
Confidence 4332 234678899998875 34 699999999843223789999999994 689886 5 899999999
Q ss_pred HcCCEEEEeccccccccccc----CCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCC
Q 002263 646 DNGGQVYMDGANMNAQVGLT----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 721 (946)
Q Consensus 646 ~~g~ll~vD~a~~~a~~gl~----~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~ 721 (946)
++|+++|+|+++.....++. .+...+.++++.++||+ + .+|.++|++.+++++.+.+.....
T Consensus 237 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~----~~G~r~G~~~~~~~l~~~~~~~~~--------- 302 (444)
T 3if2_A 237 RYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-G----LPGMRTGIIVADAKVIEAVSAMNA--------- 302 (444)
T ss_dssp HTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-T----CGGGCCEEEECCHHHHHHHHHHHH---------
T ss_pred HCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-c----CCCCceEEEEECHHHHHHHHHHHH---------
Confidence 99999999998742111111 12234677889999996 3 246778999888776654421100
Q ss_pred CCCCCCCCcccCccchhhHHHHHHHHHHHHcH-hhHHH-HHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEEEe
Q 002263 722 EKSQPLGTIAAAPWGSALILPISYTYIAMMGS-KGLTE-ASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVD 796 (946)
Q Consensus 722 ~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~-eGl~~-~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v~~ 796 (946)
....++++.++ .++..++..... +-+++ ..+....+.+++.+.|.+.+ .+.+..+.+..+ +.++
T Consensus 303 -----~~~~~~~~~~~----~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~--~~~~ 371 (444)
T 3if2_A 303 -----VVNLAPTRFGA----AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIF--LWLW 371 (444)
T ss_dssp -----HHHSSCCCHHH----HHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSE--EEEE
T ss_pred -----hccCCCChHHH----HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEE--EEEE
Confidence 00111111111 122222221110 11112 23334455667777776532 222222222221 3455
Q ss_pred cccccccCCCCHHHHHHHHHHCCcccCCC-CC-C---------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 797 LRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SW-P---------VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 797 ~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~-~~-p---------~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
++. .+.+..++.++|.++||.+... .| + ..+++||+++. ++++|+++++.|.++++++.+
T Consensus 372 ~~~----~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 372 FKD----LPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp ETT----CSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHHHT
T ss_pred cCC----CCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHHHc
Confidence 541 1467899999999999986422 12 1 12689999986 899999999999999887653
No 275
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.67 E-value=3e-15 Score=171.31 Aligned_cols=244 Identities=17% Similarity=0.121 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHhCCCCcceEE---cccHHHHHHHHHHHhccccCCCCEEEEcC-CCCHHHHHHHH------HhhcCCCeE
Q 002263 101 LLNFQTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS-NCHPQTIDICI------TRADGFDIK 170 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl---~~~~Ta~~ea~~la~~~~~~~gd~vvv~~-~~Hps~~~~~~------~~a~~~gi~ 170 (946)
..++++.+|+++|.+. +.+ +.+||+++.+++.++ .. +||+||+++ ..|+.+...+. ..++..|++
T Consensus 61 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~al-l~--~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~ 135 (409)
T 3jzl_A 61 RDTLERVYATVFKTEA--ALVRPQIISGTHAISTVLFGI-LR--PDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIG 135 (409)
T ss_dssp HHHHHHHHHHHHTCSE--EEEETTSCSHHHHHHHHHHHH-CC--TTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCE
T ss_pred HHHHHHHHHHHhCCCc--EEEECCCccHHHHHHHHHHHh-cC--CCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCE
Confidence 4556789999999986 444 788998877776665 23 899999998 89988876652 224457999
Q ss_pred EEEecc--------ccccc-cCCCEeEEEEEc----C-CCceeecchHHHHHHHHh--CCcEEEEEecCccccC-CCCCC
Q 002263 171 VVVSDL--------KDIDY-KSGDVCGVLVQY----P-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTI-LKPPG 233 (946)
Q Consensus 171 v~~~~~--------~~l~~-i~~~t~~v~v~~----p-n~~G~i~di~~i~~~a~~--~gal~~v~a~~~al~~-l~~~~ 233 (946)
++++|. +++++ ++++|++|++++ | |.+|.+.|+++|+++||+ +|++++|| +.++.+. ...|.
T Consensus 136 ~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD-~a~~~~~~~~~p~ 214 (409)
T 3jzl_A 136 YSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVD-NCYGEFVEYQEPP 214 (409)
T ss_dssp EEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEE-CTTCTTTSSCCSG
T ss_pred EEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEe-CCcccccccCCcc
Confidence 999876 34555 788999999998 8 789999999999999999 99999995 3445444 34677
Q ss_pred CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 234 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 234 ~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
++|+|++++|. |.|+++ |.|..|+++.++++++++..+. +...+.+..+.+. .
T Consensus 215 ~~g~Div~~S~sK~lgg~---~~~~GG~v~~~~~li~~l~~~~-------------------~~~~~g~~~g~~~----~ 268 (409)
T 3jzl_A 215 EVGADIIAGSLIKNPGGG---LAKTGGYIAGKEALVDLCGYRL-------------------TTPGIGREAGASL----Y 268 (409)
T ss_dssp GGTCSEEEEETTSGGGTT---TCSSCEEEEECHHHHHHHHHHH-------------------SCTTTGGGCCCCT----T
T ss_pred ccCCeEEEECccccCCcc---CCceEEEEEeCHHHHHHHHHHh-------------------ccccccccccccH----H
Confidence 89999999998 877632 2255699999998877652110 0000111111111 0
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcC-eEEEecCC---HHHHHHHHHHcC
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFD-TVKVKCAD---AHAIASAAYKIE 384 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~-~~~i~~~~---~~~v~~~L~~~G 384 (946)
...++..+ -+-+....++..+++.++++.|+++| +++... +..+ .+.|.+++ +.++++.|+...
T Consensus 269 ~~~~~l~g-------l~~~~~r~~~~~~~a~~la~~L~~~g-~~v~p~~~~~~~~~i~~i~l~~~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 269 SLLEMYQG-------FFLAPHVTAQAIKGARFTAAMLAEFG-VEADPVWDAPRTDLIQSVSFHNKEKMVAFAQAIQAAS 339 (409)
T ss_dssp CHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTT-CEEESCTTSCCSSSCCEEECSCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHH-------HhhHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence 01111111 12234566777889999999999998 787532 1111 34444444 456777777653
No 276
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.67 E-value=1.3e-15 Score=173.79 Aligned_cols=163 Identities=17% Similarity=0.228 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~ 596 (946)
...++++.+++++|.+. .+..++|+++...+ ++.+. .++++|+++...|+.+... +...|++++.++
T Consensus 60 ~~~~l~~~la~~~g~~~-~i~~~sG~~ai~~~---~~~~~-----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 130 (389)
T 3acz_A 60 TVEQFEEMVCSIEGAAG-SAAFGSGMGAISSS---TLAFL-----QKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID 130 (389)
T ss_dssp HHHHHHHHHHHHHTCSE-EEEESSHHHHHHHH---HTTTC-----CTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCe-EEEeCCHHHHHHHH---HHHHh-----CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 35688899999999884 35556677555333 33221 2568899998877765444 567899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
. .|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++.... +..|.++|+|++
T Consensus 131 ~-----~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~~~~~~~~~livD~~~~~~~--~~~~~~~~~di~ 199 (389)
T 3acz_A 131 T-----SDVEKVKAAWK---PNTKMVYLESPANPTCKVS-DIKGIAVVCHERGARLVVDATFTSPC--FLKPLELGADIA 199 (389)
T ss_dssp T-----TCHHHHHHTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHTCEEEEECTTTCTT--TCCGGGTTCSEE
T ss_pred C-----CCHHHHHHhcC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcccc--ccCccccCCeEE
Confidence 7 48999999996 789999999995 689988 79999999999999999999864322 235666899999
Q ss_pred EeCCCcccccCCCCCCCc-ceeEEEec-ccCCCC
Q 002263 676 HLNLHKTFCIPHGGGGPG-MGPIGVKK-HLAPFL 707 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg-~G~i~~~~-~l~~~l 707 (946)
+.++||+|+.| |.. +|++++++ ++.+.+
T Consensus 200 ~~S~sK~~~~~----~~~~~G~v~~~~~~~~~~l 229 (389)
T 3acz_A 200 LHSVSKYINGH----GDVIGGVSSAKTAEDIATI 229 (389)
T ss_dssp EEETTTTTTCS----SCCCCEEEEESSHHHHHHH
T ss_pred EECChhhccCC----CCceeEEEEECcHHHHHHH
Confidence 99999998522 222 48999887 665443
No 277
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.67 E-value=9.9e-15 Score=166.10 Aligned_cols=291 Identities=11% Similarity=0.062 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc----ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI----QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 175 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~----~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~ 175 (946)
...++++.+|+++|.+ ++.++.+||.+.+.++.+++. ..++||+|+++...|+++...++. .|.+++.++
T Consensus 35 ~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~----~g~~~~~~~ 108 (390)
T 3b8x_A 35 YVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQ----YGLRVKFVD 108 (390)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHH----TTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHH----cCCEEEEEe
Confidence 4567889999999987 477888999887777766520 012789999999999999998753 588888876
Q ss_pred cc---------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccc--eEEEec
Q 002263 176 LK---------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGA--DIVVGS 243 (946)
Q Consensus 176 ~~---------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~Ga--Di~v~s 243 (946)
++ ++++ ++++|++|++++ .+|...|+++|.++|+++|+++++|+ .++.+.......+|+ |+.+.+
T Consensus 109 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~--~~g~~~~~~~i~~l~~~~~~~li~D~-a~~~g~~~~~~~~g~~~~~~~~s 185 (390)
T 3b8x_A 109 IDINTLNIDIESLKEAVTDSTKAILTVN--LLGNPNNFDEINKIIGGRDIILLEDN-CESMGATFNNKCAGTFGLMGTFS 185 (390)
T ss_dssp BCTTTCSBCHHHHHHHCCTTEEEEEEEC--GGGCCCCHHHHHHHHTTSCCEEEEEC-TTCTTCEETTEETTSSSSEEEEE
T ss_pred cCccccCcCHHHHHHHhCcCCeEEEEEC--CccChhhHHHHHHHHHHcCCEEEEEC-cCcccCEECCcccccccceEEEE
Confidence 53 3455 778899999874 67888999999999999999999953 445554333345676 555433
Q ss_pred ---cccccccCCCCCCceEEEEEch-hhhhcCCCc-eEeEeecCCCCcceEEeccc--ccccccccc-c----CCCccch
Q 002263 244 ---AQRFGVPMGYGGPHAAFLATSQ-EYKRMMPGR-IVGVSIDSSGKPALRVAMQT--REQHIRRDK-A----TSNICTA 311 (946)
Q Consensus 244 ---~k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~-~~G~s~d~~g~~~~~l~l~t--re~~irre~-a----Tsni~t~ 311 (946)
+|+++ +|.| |++++++ ++.+++... ..|+..+......+.+...+ .+...+++. | ++++
T Consensus 186 ~~~~k~~~-----~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 256 (390)
T 3b8x_A 186 SFYSNHIA-----TMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEM--- 256 (390)
T ss_dssp CCTTSSSC-----SSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHH---
T ss_pred ccCCCCCc-----cCCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHH---
Confidence 46653 2234 8998886 554433211 11110000000000000000 000111111 1 3332
Q ss_pred HHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcCeEEEecC---C--HHHHHHHHHHc
Q 002263 312 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCA---D--AHAIASAAYKI 383 (946)
Q Consensus 312 ~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~~~~i~~~---~--~~~v~~~L~~~ 383 (946)
++..++. . -+.++++.++..++++++.+.|+++.++++... ..+..+.+.++ + ..++.+.|.++
T Consensus 257 ~aa~~l~------~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~ 328 (390)
T 3b8x_A 257 SGAIGIE------Q--LKKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSA 328 (390)
T ss_dssp HHHHHHH------H--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHT
T ss_pred HHHHHHH------H--HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHC
Confidence 2221211 1 146778888999999999999999833888643 12233544444 2 78899999999
Q ss_pred CCeeeeec------C-----------------------CeEEEEeccCCCHHHHHHHHHHHh
Q 002263 384 EMNLRVVD------S-----------------------NTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 384 GI~~~~~~------~-----------------------~~lris~~~~~t~edid~ll~~l~ 416 (946)
||.++... . +.||++++..+|++|+++++++|+
T Consensus 329 gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 390 (390)
T 3b8x_A 329 GIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVLK 390 (390)
T ss_dssp TBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHTC
T ss_pred CCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhhC
Confidence 99765310 0 259999999999999999999863
No 278
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.67 E-value=1.8e-14 Score=162.29 Aligned_cols=296 Identities=13% Similarity=0.121 Sum_probs=197.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 139 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~ 139 (946)
+.|..+...|+.+.+.+.+...-...|.+ .| ..++++.+|+++|.++.++.+++|+|.+++.++.++
T Consensus 30 ~~~~~~~~~~~~v~~a~~~~~~~~~~y~~------~~----~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--- 96 (364)
T 1lc5_A 30 SANINPLGMPVSVKRALIDNLDCIERYPD------AD----YFHLHQALARHHQVPASWILAGNGETESIFTVASGL--- 96 (364)
T ss_dssp SSCCCTTCCCHHHHHHHHHTGGGGGSCCC------TT----CHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH---
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhhcCCC------CC----HHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc---
Confidence 33444444666776666543221233321 11 346778999999998888999999998888766654
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc------cc---c-cCCCEeEEEEEcC-CCceeecc---hHH
Q 002263 140 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD------ID---Y-KSGDVCGVLVQYP-GTEGEVLD---YGD 205 (946)
Q Consensus 140 ~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~------l~---~-i~~~t~~v~v~~p-n~~G~i~d---i~~ 205 (946)
++|+|+++...|+.+...++. .|.+++.++.+. ++ + +++++++|++.+| |.+|.+.| +++
T Consensus 97 --~gd~vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 170 (364)
T 1lc5_A 97 --KPRRAMIVTPGFAEYGRALAQ----SGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQA 170 (364)
T ss_dssp --CCSEEEEEESCCTHHHHHHHH----TTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHH
T ss_pred --CCCeEEEeCCCcHHHHHHHHH----cCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 359999999999988877643 588888876532 23 2 4567899998998 56999987 999
Q ss_pred HHHHHHhCCcEEEEEecCccccCC------CCCCCccceEEEecc-ccccccCCCCCCceEEEE-EchhhhhcCCCceEe
Q 002263 206 FIKNAHANGVKVVMATDLLALTIL------KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA-TSQEYKRMMPGRIVG 277 (946)
Q Consensus 206 i~~~a~~~gal~~v~a~~~al~~l------~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~-~~~~~~~~lp~~~~G 277 (946)
|+++|+++|+++++|. ..+.... .....++.|+++.|. |.|+.| |-.+|+++ .++++.+.+...
T Consensus 171 i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~l~~~--- 242 (364)
T 1lc5_A 171 IADRCKSLNINLILDE-AFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIP----GLRLGYLVNSDDAAMARMRRQ--- 242 (364)
T ss_dssp HHHHHHHHTCEEEEEC-TTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCT----TTCCEEEECCCHHHHHHHHHH---
T ss_pred HHHHhhhcCcEEEEEC-cChhhccCccchhhHhccCCCEEEEEECchhhcCC----ccceEEEEECCHHHHHHHHHh---
Confidence 9999999999999953 3222111 112446889999997 877532 33469999 888776654100
Q ss_pred EeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 002263 278 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV 357 (946)
Q Consensus 278 ~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~ 357 (946)
+...+.|. ....+..++ +...+.++++.++..++.+++.+.|++++++++
T Consensus 243 -----------------------~~~~~~~~---~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 292 (364)
T 1lc5_A 243 -----------------------QMPWSVNA---LAALAGEVA----LQDSAWQQATWHWLREEGARFYQALCQLPLLTV 292 (364)
T ss_dssp -----------------------SCTTCSCH---HHHHHHHHG----GGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred -----------------------CCCCCCCH---HHHHHHHHH----HhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 00011111 111111111 112356788888899999999999998833887
Q ss_pred cCCCCcCeEEEecCC-HHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 358 QGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 358 ~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
... ...-+.+.+++ ..++.+.|.++||.++.. .++.+|+|++ +.+|+++++++|.
T Consensus 293 ~~~-~g~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~ 354 (364)
T 1lc5_A 293 YPG-RANYLLLRCEREDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALR 354 (364)
T ss_dssp CCC-SSSEEEEEESCTTCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHH
T ss_pred CCC-CCeEEEEECCCcHHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC---CHHHHHHHHHHHH
Confidence 642 22224455554 557889999999988653 1478999965 6899999999886
No 279
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.67 E-value=4e-15 Score=168.07 Aligned_cols=271 Identities=12% Similarity=0.091 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cc--cCCC-CEEEEcCCCCHHHHHHHHHhhcC----CCeE--
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQ--KGKK-KTFIIASNCHPQTIDICITRADG----FDIK-- 170 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~--~~~g-d~vvv~~~~Hps~~~~~~~~a~~----~gi~-- 170 (946)
..++++.+++++|++ .++.+++|||.++++++.+.+ +. .++| |+|++++..|+.....+...... .+..
T Consensus 72 ~~~l~~~la~~~g~~-~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 150 (375)
T 2eh6_A 72 QEELAHKLVKHFWTE-GKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPL 150 (375)
T ss_dssp HHHHHHHHHHTSSSC-EEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSC
T ss_pred HHHHHHHHHhhcCCC-CeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCC
Confidence 346778999999984 678899999988887765421 11 0256 99999988765544433222110 1222
Q ss_pred ---EEEe---ccccccc-cCCCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCcc-ccCCCC---CCC
Q 002263 171 ---VVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP---PGE 234 (946)
Q Consensus 171 ---v~~~---~~~~l~~-i~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~a-l~~l~~---~~~ 234 (946)
+..+ |+++|++ +++++++|++++| |.+|.+.| +++|.++|+++|+++++|. ..+ ++.... ...
T Consensus 151 ~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~ 229 (375)
T 2eh6_A 151 VPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDE-VQTGIGRTGEFYAYQH 229 (375)
T ss_dssp CSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEEC-TTTTTTTTSSSSGGGG
T ss_pred CCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEec-cccCCCCCCcchhhhh
Confidence 4443 4567777 7788999999877 67899988 9999999999999999953 333 432211 234
Q ss_pred cc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 235 LG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 235 ~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
+| .|+++.| |+|+. |.+.|++++++++.+.+.....+ .|. +++.
T Consensus 230 ~~~~~d~~s~S-K~~~~-----g~~~G~~~~~~~~~~~~~~~~~~--------------------------~~~--~~~~ 275 (375)
T 2eh6_A 230 FNLKPDVIALA-KGLGG-----GVPIGAILAREEVAQSFTPGSHG--------------------------STF--GGNP 275 (375)
T ss_dssp GTCCCSEEEEC-GGGGT-----TSCCEEEEEEHHHHTTCCTTSCC--------------------------CSS--TTCH
T ss_pred cCCCCCEEEEc-ccccC-----CCCeEEEEEcHHHHhhhcCCCCC--------------------------CCC--CCCH
Confidence 56 8988666 98852 35678999998887766321100 011 1111
Q ss_pred H-HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC-HHHHHHHHHHcCCeeeee
Q 002263 313 A-LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 313 ~-l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~ 390 (946)
. ..+..+++ ..+ +++.++..++.+++++.|++++ ..... ....-+.+.++. ..++.+.|.++||.+...
T Consensus 276 ~~~~~~~~~l--~~~-----~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~gi~~~~~ 346 (375)
T 2eh6_A 276 LACRAGTVVV--DEV-----EKLLPHVREVGNYFKEKLKELG-KGKVK-GRGLMLGLELERECKDYVLKALEKGLLINCT 346 (375)
T ss_dssp HHHHHHHHHH--HHH-----HHHHHHHHHHHHHHHHHHHHTT-SSEEE-EETTEEEEECSSCCHHHHHHHHHTTEECEEE
T ss_pred HHHHHHHHHH--HHH-----HHHHHHHHHHHHHHHHHHHHHh-cCCce-EEEEEEEEEEcCcHHHHHHHHHHCCCEEecC
Confidence 1 11112222 222 1567788889999999999886 32111 111234555554 678999999999998866
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 ~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.++.+|++++..++++|+++++++|+
T Consensus 347 ~~~~iRi~~~~~~~~~~i~~~~~~l~ 372 (375)
T 2eh6_A 347 AGKVLRFLPPLIIQKEHIDRAISVLR 372 (375)
T ss_dssp TTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 67899999999999999999999986
No 280
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.67 E-value=3.2e-15 Score=171.75 Aligned_cols=272 Identities=19% Similarity=0.174 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc--
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 178 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~-- 178 (946)
..++++.+++++|.+ .+.++.+|++++++++.++ .. +||+||++...|+.+...++..++..|++++.+|.++
T Consensus 83 ~~~l~~~la~~~g~~--~~~~~~sG~~Ai~~al~~l-~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~ 157 (414)
T 3ndn_A 83 VSVFEERLRLIEGAP--AAFATASGMAAVFTSLGAL-LG--AGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLS 157 (414)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTT-CC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHH
T ss_pred HHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHH-hC--CCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHH
Confidence 456778999999975 4778899998887776665 23 8999999999999998888665566899999998754
Q ss_pred -ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCC
Q 002263 179 -IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 254 (946)
Q Consensus 179 -l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~G 254 (946)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+....+.++|+|+++.|. |.|+++ |
T Consensus 158 ~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livD-e~~~~~~~~~~~~~g~div~~S~sK~l~~~---G 233 (414)
T 3ndn_A 158 QWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLD-NVFATPLLQQGFPLGVDVVVYSGTKHIDGQ---G 233 (414)
T ss_dssp HHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEE-CTTTHHHHCCCGGGTCSEEEEETTTTTTCS---S
T ss_pred HHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCeEeccCCccccCC---C
Confidence 555 7889999999998 78999999999999999999999995 34455545566789999999998 777421 2
Q ss_pred CCceEEEEEchhhhh-cCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHH
Q 002263 255 GPHAAFLATSQEYKR-MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 333 (946)
Q Consensus 255 GP~~g~l~~~~~~~~-~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 333 (946)
.+-+|++.++++.+. .+.. .++..|.. . .++. + ++...+.+.+..
T Consensus 234 ~~~~G~vv~~~~~~~~~l~~-------------------------~~~~~g~~-~---~~~~---a--~~~~~~l~~l~~ 279 (414)
T 3ndn_A 234 RVLGGAILGDREYIDGPVQK-------------------------LMRHTGPA-M---SAFN---A--WVLLKGLETLAI 279 (414)
T ss_dssp CCCCEEEEECHHHHTTHHHH-------------------------HHHHHCCC-C---CHHH---H--HHHHHHGGGHHH
T ss_pred CceEEEEEECHHHHHHHHHH-------------------------HHHHcCCC-C---CHHH---H--HHHHHHHHHHHH
Confidence 133689988876553 2200 00111111 0 1111 1 112233455666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEc-CCC----------------CcCeEEEecCC--------HHHHHHHHHHcCCeee
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVEVQ-GLP----------------FFDTVKVKCAD--------AHAIASAAYKIEMNLR 388 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~~~-~~~----------------~~~~~~i~~~~--------~~~v~~~L~~~GI~~~ 388 (946)
..++..+++.++.+.|++..++..+ .+. ....+.|.+++ +..+.++|...++.++
T Consensus 280 r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s 359 (414)
T 3ndn_A 280 RVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNN 359 (414)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCC
Confidence 6777888999999999887435432 110 12246666543 4455556554443221
Q ss_pred ------e---------------------ecCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 389 ------V---------------------VDSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 389 ------~---------------------~~~~~lris~~~~~t~edid~ll~~l 415 (946)
. +.++.||+|++..+.++.+++|.++|
T Consensus 360 ~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al 413 (414)
T 3ndn_A 360 LGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRAL 413 (414)
T ss_dssp CSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhh
Confidence 0 13578999999877777777777766
No 281
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.67 E-value=1.1e-14 Score=169.59 Aligned_cols=298 Identities=17% Similarity=0.199 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC-----
Q 002263 519 QEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM----- 590 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~----- 590 (946)
.+...++.++++++++.+ ...++.++|++++++++.+++.| . ++++||+ ..++||....+..+.|.
T Consensus 106 ~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~---~---g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 179 (453)
T 4ffc_A 106 YEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLA---T---GRPAVVAFDNAYHGRTNLTMALTAKSMPYK 179 (453)
T ss_dssp CHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHH---H---CCCEEEEETTCCCCSSHHHHHHCCCCTTTT
T ss_pred CHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHh---c---CCCEEEEEcCccCCcchHHHhhcCCCcccc
Confidence 345668889999998743 23466788998887777666654 2 3456664 57789988777655332
Q ss_pred --------EEEEEcCCC-----CCCCC-------HHHHHHHHHhcCCCeEEEEEeCCC-ccccccc---CHHHHHHHHHH
Q 002263 591 --------KIVSVGTDA-----KGNIN-------IEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHD 646 (946)
Q Consensus 591 --------~vv~v~~~~-----~g~~D-------~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~---~i~~I~~ia~~ 646 (946)
.+..+|+.. .|..+ +++|++++. .+++++|+++..+ +.|++.+ .+++|.++|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~--~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~ 257 (453)
T 4ffc_A 180 SQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIG--AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASE 257 (453)
T ss_dssp TTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcC--CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 466666541 12211 344554443 2345555554333 4566641 29999999999
Q ss_pred cCCEEEEecccccccccccCCCcc--------CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCC
Q 002263 647 NGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 718 (946)
Q Consensus 647 ~g~ll~vD~a~~~a~~gl~~pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~ 718 (946)
||+++|+|.++ .++.+.|.+ ..|+++++ |+|+ +|.++|++++++++++.+.....
T Consensus 258 ~~~llI~DEv~----~g~g~~g~~~a~~~~~~~pdi~t~s--K~~~-----~G~~~G~~~~~~~i~~~~~~~~~------ 320 (453)
T 4ffc_A 258 NGVVFIADEVQ----TGFARTGAWFASEHEGIVPDIVTMA--KGIA-----GGMPLSAVTGRAELMDAVYAGGL------ 320 (453)
T ss_dssp HTCEEEEECTT----TTTTTTSSSSTHHHHTCCCSEEEEC--GGGG-----TTSSCEEEEEEHHHHTTSCTTSS------
T ss_pred cCCEEEEecCc----cCCCcccccchhhhcCCCcchHhhh--hhhc-----CCcCeEEEEECHHHHhhhcccCc------
Confidence 99999999875 334333322 35888764 9884 36889999999887765531100
Q ss_pred CCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeE
Q 002263 719 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEF 793 (946)
Q Consensus 719 ~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~ 793 (946)
.+..+ ++.+.++++.+.+..+..+++.+. ...+.++++++|++. +... ..+ .+.+ +
T Consensus 321 --------~~t~~----~~~~~~aaa~aal~~~~~~~~~~~---~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~---~ 381 (453)
T 4ffc_A 321 --------GGTYG----GNPVTCAAAVAALGVMRELDLPAR---ARAIEASVTSRLSALAEEVDIIGEVRG-RGAM---L 381 (453)
T ss_dssp --------CCSSS----SCHHHHHHHHHHHHHHHHTTHHHH---HHHHHHHHHHHHHHHHHHCSSEEEEEE-ETTE---E
T ss_pred --------CCCCC----cCHHHHHHHHHHHHHhhhhhHHHH---HHHHHHHHHHHHHHHHhhCCCeEEEEe-eceE---E
Confidence 01122 234444555666666555544433 345566777777653 2221 112 1222 2
Q ss_pred EEeccc--ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 794 IVDLRG--LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 794 v~~~~~--~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+++.. .+........++.++|.++|+.+.... +..+.+||+++...|++|++++++.|+++++++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 382 AIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCG-TFGNVIRLLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp EEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEEC-TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 333321 000011235688999999999875322 1147899999999999999999999999987653
No 282
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.66 E-value=1.5e-15 Score=173.48 Aligned_cols=277 Identities=11% Similarity=0.053 Sum_probs=188.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCCC---cceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 95 QGRLESLLNFQTMIADLTGLPM---SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~---~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
.|..+...++++.+++++|.+. .++.+++|+|.+++.++.++ .. +||+|+++...|+++...++. .|.++
T Consensus 78 ~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l-~~--~gd~vl~~~~~~~~~~~~~~~----~g~~~ 150 (407)
T 3nra_A 78 RGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAAT-VA--RGDKVAIVQPDYFANRKLVEF----FEGEM 150 (407)
T ss_dssp TCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTT-CC--TTCEEEEEESCCTHHHHHHHH----TTCEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh-CC--CCCEEEEcCCcccchHHHHHH----cCCEE
Confidence 3555666777889999999853 57889999998887776655 23 789999999999998877653 57777
Q ss_pred EEecc--------------ccccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC--
Q 002263 172 VVSDL--------------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-- 230 (946)
Q Consensus 172 ~~~~~--------------~~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~-- 230 (946)
+.++. +++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|+++++|. ..+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De-a~~~~~~~g~ 229 (407)
T 3nra_A 151 VPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQ-LYSRLRYAGA 229 (407)
T ss_dssp EEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTSBCTTC
T ss_pred EEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEc-cccccccCCC
Confidence 77654 33444 5568899999998 67999988 9999999999999999943 33321110
Q ss_pred --CC------CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccc
Q 002263 231 --PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 301 (946)
Q Consensus 231 --~~------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr 301 (946)
.+ ...+.+++++|. |.|+.| |..+|++++++++++.+... ++
T Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----G~r~G~~~~~~~~~~~l~~~-------------------------~~ 280 (407)
T 3nra_A 230 SYTHLRAEAAVDAENVVTIMGPSKTESLS----GYRLGVAFGSRAIIARMEKL-------------------------QA 280 (407)
T ss_dssp CCCCGGGCTTSCGGGEEEEECSSSTTCCG----GGCCEEEEECHHHHHHHHHH-------------------------HH
T ss_pred CCCChhhcCcccCCcEEEEeCcccccCCC----eeeEEEEEcCHHHHHHHHHH-------------------------Hh
Confidence 01 236678999987 887533 34578999988877655110 00
Q ss_pred cccCCCccchHHHHHHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC--C--HHH
Q 002263 302 DKATSNICTAQALLANMAAMYAVYH--GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--D--AHA 375 (946)
Q Consensus 302 e~aTsni~t~~~l~a~~aa~y~~~~--g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~--~--~~~ 375 (946)
. .+ .+++ .+ +..++. ..+ +.+.+++..++..++.++|++.|++++++++........+.+.++ + ..+
T Consensus 281 ~-~~--~~~~-~~-~~~a~~--~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (407)
T 3nra_A 281 I-VS--LRAA-GY-SQAVLR--GWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAE 353 (407)
T ss_dssp H-HT--SSSC-HH-HHGGGG--GTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHH
T ss_pred h-hc--cCCC-hH-HHHHHH--HHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHH
Confidence 0 01 1111 11 111111 222 335678888899999999999999983377653321112223332 2 778
Q ss_pred HHHHHHH-cCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 376 IASAAYK-IEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 376 v~~~L~~-~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.++|.+ +||.++.. ..+.+|+|++. ++++|+++++.|..
T Consensus 354 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~ 400 (407)
T 3nra_A 354 FVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVT 400 (407)
T ss_dssp HHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHH
Confidence 9999975 59988642 25789999984 89999999999863
No 283
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.66 E-value=1.4e-14 Score=163.67 Aligned_cols=264 Identities=12% Similarity=0.031 Sum_probs=183.0
Q ss_pred HHHHHHHHH------hCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 103 NFQTMIADL------TGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 103 e~q~~la~L------~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
++++.+|++ ++.++.++.+++|+|+++++++.++. . +||+|+++...|+++...++ ..|.+++.++.
T Consensus 73 ~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~-~--~gd~Vl~~~~~y~~~~~~~~----~~g~~~~~v~~ 145 (369)
T 3cq5_A 73 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFG-G--PGRTALGFQPSYSMHPILAK----GTHTEFIAVSR 145 (369)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-S--TTCEEEEEESSCTHHHHHHH----HTTCEEEEEEC
T ss_pred HHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhc-C--CCCEEEEcCCChHHHHHHHH----HcCCEEEEecC
Confidence 456677777 56667788889999988887766652 2 78999999999999887654 35778877754
Q ss_pred --------ccccc-cCC-CEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCC-CC----CCCcc-ceE
Q 002263 177 --------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KP----PGELG-ADI 239 (946)
Q Consensus 177 --------~~l~~-i~~-~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-~~----~~~~G-aDi 239 (946)
+++++ +++ ++++|++.+| |.+|.+.|++++.++++.+++++++|. ..+.... .+ ...++ .++
T Consensus 146 ~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~i 224 (369)
T 3cq5_A 146 GADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDE-AYAEFSPSPSATTLLEKYPTKLV 224 (369)
T ss_dssp CTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEEC-TTGGGCCSCCGGGGTTTCTTTEE
T ss_pred CcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEEC-CchhhcCCcchHHHHhhCCCCEE
Confidence 33444 555 7899999888 679999999999999999999888843 3332221 11 13356 778
Q ss_pred EEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 240 VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 240 ~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
+++|. |.|+.| |..+|++++++++.+.+... .. ..+.|. ....+..
T Consensus 225 ~~~s~sK~~~~~----G~r~G~~~~~~~~~~~l~~~----------~~----------------~~~~~~---~~~~a~~ 271 (369)
T 3cq5_A 225 VSRTMSKAFDFA----GGRLGYFVANPAFIDAVMLV----------RL----------------PYHLSA---LSQAAAI 271 (369)
T ss_dssp EEEESSSTTSCG----GGCCEEEEECTHHHHHHHTT----------SC----------------TTCSCH---HHHHHHH
T ss_pred EEEechHhcCCc----ccceEEEEeCHHHHHHHHHc----------CC----------------CCCCCH---HHHHHHH
Confidence 88887 877532 33469999998876654110 00 001111 1121222
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC-HHHHHHHHHHcCCeeeee-cCCeEE
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-DSNTVT 396 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-~~~v~~~L~~~GI~~~~~-~~~~lr 396 (946)
+++ . ..+.++++.++..++.+++.+.|++.| +++... ....+.+.++. ..++.++|.++||.++.. .++.+|
T Consensus 272 ~~l--~--~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~iR 345 (369)
T 3cq5_A 272 VAL--R--HSADTLGTVEKLSVERVRVAARLEELG-YAVVPS-ESNFVFFGDFSDQHAAWQAFLDRGVLIRDVGIAGHLR 345 (369)
T ss_dssp HHH--H--THHHHHTHHHHHHHHHHHHHHHHHHHT-CEEECC-SSSEEEEECCSSHHHHHHHHHHTTEECBCCSCTTEEE
T ss_pred HHh--c--CHHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCC-CCeEEEEECCCCHHHHHHHHHHCCEEEEECCCCCeEE
Confidence 221 2 234678888889999999999998877 877632 22234555553 788999999999988654 257899
Q ss_pred EEeccCCCHHHHHHHHHHHh
Q 002263 397 ASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 397 is~~~~~t~edid~ll~~l~ 416 (946)
++++ +++|+++++++|.
T Consensus 346 is~~---~~~~i~~~~~~l~ 362 (369)
T 3cq5_A 346 TTIG---VPEENDAFLDAAA 362 (369)
T ss_dssp EECC---CHHHHHHHHHHHH
T ss_pred EEeC---CHHHHHHHHHHHH
Confidence 9998 7999999999986
No 284
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.66 E-value=4.2e-15 Score=171.81 Aligned_cols=290 Identities=17% Similarity=0.201 Sum_probs=177.8
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCCE---------
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK--------- 591 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~~--------- 591 (946)
..++.+.++++++-....++.++|++++++++.+++.|. ++++||+ ..+.||....+....|..
T Consensus 97 ~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~------~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 170 (434)
T 3l44_A 97 EVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYT------GRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDS 170 (434)
T ss_dssp HHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCSSGGGGBC-------CCCBSS
T ss_pred HHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhh------CCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCc
Confidence 457888899988522234667788888777666665541 3567776 456677665544333332
Q ss_pred ----------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC----HHHHHHHHHHcCCEEEEecc
Q 002263 592 ----------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYMDGA 656 (946)
Q Consensus 592 ----------vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~----i~~I~~ia~~~g~ll~vD~a 656 (946)
++.+|. .|+++|+++++++.+++++|+++.++ +.|++. + +++|.++|++||++||+|++
T Consensus 171 ~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~-~~~~~l~~l~~l~~~~~illI~DEv 244 (434)
T 3l44_A 171 AGVPQSIAQEVITVPF-----NNVETLKEALDKWGHEVAAILVEPIVGNFGIVE-PKPGFLEKVNELVHEAGALVIYDEV 244 (434)
T ss_dssp TTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBC-CCTTHHHHHHHHHHTTTCEEEEECT
T ss_pred CCCCCcCCCceEecCc-----ccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEecc
Confidence 233332 28999999998655678777777654 567665 4 99999999999999999997
Q ss_pred cccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 657 NMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 657 ~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
+ .++ +.+. ...|++++ .|+|+ ||.++|++++++++++.+.... .....+
T Consensus 245 ~----~g~-~~g~~~~~~~~~~~~di~t~--sK~~~-----~G~~iG~~~~~~~i~~~~~~~~-----------~~~~~~ 301 (434)
T 3l44_A 245 I----TAF-RFMYGGAQDLLGVTPDLTAL--GKVIG-----GGLPIGAYGGKKEIMEQVAPLG-----------PAYQAG 301 (434)
T ss_dssp T----TTT-TSSSSCHHHHHTCCCSEEEE--EGGGG-----TTSSCEEEEECHHHHTTBTTTS-----------SBCCCC
T ss_pred c----cce-eccccHHHHHcCCCCCeeeh--hhhhc-----CCcCeeeEEEcHHHHHhhccCC-----------CcccCC
Confidence 5 344 3332 23688766 49884 5688999998888776553110 000001
Q ss_pred CcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeeEEEecccccc-
Q 002263 729 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLKN- 802 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~~~~- 802 (946)
+.+ ++...++++.+.+..+..+.+. ++...+.++++++|++. +.+ ...+ .+.+ +.+.+.....
T Consensus 302 t~~----~~~~a~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~ 370 (434)
T 3l44_A 302 TMA----GNPASMASGIACLEVLQQEGLY---EKLDELGATLEKGILEQAAKHNIDITLNR-LKGA---LTVYFTTNTIE 370 (434)
T ss_dssp TTT----TCHHHHHHHHHHHHHHTSTTHH---HHHHHHHHHHHHHHHHHHHHTTCCEEEEE-ETTE---EEEEESSSCCC
T ss_pred CCC----cCHHHHHHHHHHHHHHHcccHH---HHHHHHHHHHHHHHHHHHHhCCCCEEEEe-eccE---EEEEEecCccc
Confidence 111 2344445556666666544443 34446677777777653 222 1111 1222 2333321000
Q ss_pred -------cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 803 -------TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 803 -------~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
.......++.+.|.++|+.+.... .+.+|++ ...|++|+|+++++|+++++++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~rl~--~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 371 DYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK---YEAWFLT--TEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp SHHHHHHSCHHHHHHHHHHHHHTTEECCSST---TCCEECC--TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhccccCHHHHHHHHHHHHHCCeEEeecC---CCcEEEe--cccCHHHHHHHHHHHHHHHHHHHh
Confidence 001123678999999999876433 2567774 468999999999999999887654
No 285
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.66 E-value=1.4e-14 Score=164.79 Aligned_cols=319 Identities=14% Similarity=0.106 Sum_probs=202.8
Q ss_pred HHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHh----CC
Q 002263 40 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLT----GL 114 (946)
Q Consensus 40 e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g~ 114 (946)
++.+...++.++++.+.+| +.|..+...|+.+.+.+.+.. .....|++. +|. .++++.+|+++ |.
T Consensus 28 ~~~~~~~~~~~~g~~~i~l-~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~g~----~~lr~~la~~~~~~~g~ 97 (389)
T 1o4s_A 28 ELDAKAKALIKKGEDVINL-TAGEPDFPTPEPVVEEAVRFLQKGEVKYTDP-----RGI----YELREGIAKRIGERYKK 97 (389)
T ss_dssp HHHHHHHHHHHTTCCCEEC-CCSSCSSCCCHHHHHHHHHHHTTCCCCCCCT-----TCC----HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCEEEc-cCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC-----CCC----HHHHHHHHHHHHHHhCC
Confidence 4555555554444444433 444444445666654443211 111234321 122 23455666665 76
Q ss_pred --CCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----------ccccc-
Q 002263 115 --PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----------KDIDY- 181 (946)
Q Consensus 115 --~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~----------~~l~~- 181 (946)
++.++.+++|+|.+++.++.++ .. +||+|+++...|+++...++ ..|++++.++. ++|++
T Consensus 98 ~~~~~~v~~~~g~t~al~~~~~~l-~~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~ 170 (389)
T 1o4s_A 98 DISPDQVVVTNGAKQALFNAFMAL-LD--PGDEVIVFSPVWVSYIPQII----LAGGTVNVVETFMSKNFQPSLEEVEGL 170 (389)
T ss_dssp CCCGGGEEEESHHHHHHHHHHHHH-CC--TTCEEEEEESCCTTHHHHHH----HTTCEEEEEECCGGGTTCCCHHHHHHT
T ss_pred CCCHHHEEEecCHHHHHHHHHHHh-CC--CCCEEEEcCCCchhHHHHHH----HcCCEEEEEecCCccCCCCCHHHHHHh
Confidence 5668989999998888777665 23 78999999999999887764 35778777654 23445
Q ss_pred cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC----CCC----CccceEEEecc-cccc
Q 002263 182 KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK----PPG----ELGADIVVGSA-QRFG 248 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~----~~~----~~GaDi~v~s~-k~lg 248 (946)
+++++++|++.+| |.+|.+.| +++|+++|+++|+++++|. ..+..... +.. ..+.|++++|. |.|+
T Consensus 171 l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-a~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~ 249 (389)
T 1o4s_A 171 LVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDE-VYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS 249 (389)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT
T ss_pred cccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEc-cccccccCCCCCCHhhcCCCCCcEEEEeechhhcC
Confidence 6778999999988 56999865 9999999999999999953 32322221 111 24789999997 7774
Q ss_pred ccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhCh
Q 002263 249 VPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 328 (946)
Q Consensus 249 ~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~ 328 (946)
.| |..+|++++++++.+.+... +...|.+.. . + +..++. ..+.
T Consensus 250 ~~----G~r~G~l~~~~~~~~~l~~~--------------------------~~~~~~~~~--~-~-~~~a~~--~~l~- 292 (389)
T 1o4s_A 250 MT----GWRVGYLISSEKVATAVSKI--------------------------QSHTTSCIN--T-V-AQYAAL--KALE- 292 (389)
T ss_dssp CG----GGCCEEEECCHHHHHHHHHH--------------------------HHHHTCSCC--H-H-HHHHHH--HHTT-
T ss_pred Cc----ccceEEEEeCHHHHHHHHHH--------------------------hhhcccCCC--H-H-HHHHHH--HHHh-
Confidence 22 22379999988876654100 001111211 1 1 111221 2232
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC-CHHHHHHHHH-HcCCeeeeec----CCeEEEEeccC
Q 002263 329 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAIASAAY-KIEMNLRVVD----SNTVTASFDET 402 (946)
Q Consensus 329 ~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-~~~~v~~~L~-~~GI~~~~~~----~~~lris~~~~ 402 (946)
.+++++.++..++.+++.+.|+++| +++.......-+.+.++ +..++.++|. ++||.+.... ++.+|+|++
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~-- 369 (389)
T 1o4s_A 293 VDNSYMVQTFKERKNFVVERLKKMG-VKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA-- 369 (389)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcC-CeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--
Confidence 2478888999999999999999986 77654221112334443 4778999997 8899886431 478999998
Q ss_pred CCHHHHHHHHHHHh
Q 002263 403 TTLEDVDKLFIVFA 416 (946)
Q Consensus 403 ~t~edid~ll~~l~ 416 (946)
+++++++++++.|.
T Consensus 370 ~~~~~l~~~l~~l~ 383 (389)
T 1o4s_A 370 TSIERLTEALDRIE 383 (389)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 48999999999886
No 286
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.66 E-value=2e-14 Score=163.21 Aligned_cols=270 Identities=11% Similarity=0.072 Sum_probs=179.9
Q ss_pred HHHHHHHHHh----CC--CCcc-eEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec
Q 002263 103 NFQTMIADLT----GL--PMSN-ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 175 (946)
Q Consensus 103 e~q~~la~L~----g~--~~~~-~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~ 175 (946)
++++.+|+++ |. ++.+ +.+++|+|.+++.++.++ .. +||+|++++..|+++...++. .|++++.++
T Consensus 67 ~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~v~ 139 (389)
T 1gd9_A 67 ELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAF-LK--DGEEVLIPTPAFVSYAPAVIL----AGGKPVEVP 139 (389)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTT-CC--TTCEEEEEESCCTTHHHHHHH----HTCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHh-CC--CCCEEEEcCCCchhHHHHHHH----CCCEEEEec
Confidence 3455666666 84 5667 889999998887766554 22 789999999999998877643 477777765
Q ss_pred c----------ccccc-cCCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCC-----CCC--
Q 002263 176 L----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK-----PPG-- 233 (946)
Q Consensus 176 ~----------~~l~~-i~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~-----~~~-- 233 (946)
. +++++ +++++++|++.+| |.+|.+. ++++|+++|+++|+++++|. ..+..... +..
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~ 218 (389)
T 1gd9_A 140 TYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDE-VYEHFIYDDARHYSIASL 218 (389)
T ss_dssp CCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCBCTTCCCCCGGGS
T ss_pred cCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeh-hhhhcccCCCCCCCHhhc
Confidence 4 23455 6778999999988 5699886 69999999999999999953 32322211 111
Q ss_pred --CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccc
Q 002263 234 --ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 310 (946)
Q Consensus 234 --~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t 310 (946)
..+.|++++|. |.|+.| |-.+|++++++++.+.+.... . + -..+.|.
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~l~~~~-----~--~-----------------~~~~~~~-- 268 (389)
T 1gd9_A 219 DGMFERTITVNGFSKTFAMT----GWRLGFVAAPSWIIERMVKFQ-----M--Y-----------------NATCPVT-- 268 (389)
T ss_dssp TTCGGGEEEEEESTTTTTCG----GGCCEEEECCHHHHHHHHHHH-----T--T-----------------TTCSCCH--
T ss_pred cCCCCCEEEEecChhhcCCc----ccceEEEEECHHHHHHHHHHH-----h--h-----------------hccCCCH--
Confidence 25789999998 776422 223699999887766541100 0 0 0011111
Q ss_pred hHHHHHHHHHHHHHHhChh--hHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC----CHHHHHHHHH-Hc
Q 002263 311 AQALLANMAAMYAVYHGPE--GLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA----DAHAIASAAY-KI 383 (946)
Q Consensus 311 ~~~l~a~~aa~y~~~~g~~--Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~----~~~~v~~~L~-~~ 383 (946)
....+..+++ . .+.+ +++++.++..++.+++.+.|+++| +++.......-+.+.++ ++.++.++|. ++
T Consensus 269 -~~~~a~~~~l--~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 343 (389)
T 1gd9_A 269 -FIQYAAAKAL--K-DERSWKAVEEMRKEYDRRRKLVWKRLNEMG-LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEA 343 (389)
T ss_dssp -HHHHHHHHHH--T-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHT
T ss_pred -HHHHHHHHHH--h-CCCcchHHHHHHHHHHHHHHHHHHHHHHcC-CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhC
Confidence 1111222221 1 1233 678888999999999999999986 77654221111223442 2778999998 88
Q ss_pred CCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 384 EMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 384 GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
||.+... .++.+|++++. ++++++++++.|..
T Consensus 344 gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~ 381 (389)
T 1gd9_A 344 RVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMER 381 (389)
T ss_dssp CEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHH
T ss_pred CEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 9988642 25789999885 89999999998863
No 287
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.66 E-value=7.4e-15 Score=170.82 Aligned_cols=297 Identities=16% Similarity=0.181 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC------
Q 002263 520 EMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------ 590 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~------ 590 (946)
+...++.++++++++.+ ...++.++|++++++++.+++.| . ++++|++ ..++||....+..+.|-
T Consensus 104 ~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~---~---g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 177 (451)
T 3oks_A 104 EGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSH---T---HKPAVVAFDHAYHGRTNLTMALTAKVMPYKD 177 (451)
T ss_dssp HHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHH---H---CCCEEEEETTCCCCSSHHHHHHCCCCTTTTT
T ss_pred HHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHh---c---CCCeEEEEcCCcCCccHHHHHhcCCCccccc
Confidence 45668889999998743 23466788998887777666654 2 3456664 67789988776554332
Q ss_pred -------EEEEEcCCCC------C-------CCCHHHHHHHHHhc--CCCeEEEEEeCCC-ccccccc-C--HHHHHHHH
Q 002263 591 -------KIVSVGTDAK------G-------NINIEELRKAAEAN--RDNLSTLMVTYPS-THGVYEE-G--IDEICKII 644 (946)
Q Consensus 591 -------~vv~v~~~~~------g-------~~D~e~L~~~i~~~--~~~t~~vvvt~Pn-~~G~~~~-~--i~~I~~ia 644 (946)
.++.+|+... | ..+++.+++.+++. .+++++|+++..+ +.|++.+ + +++|+++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~ 257 (451)
T 3oks_A 178 GFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWC 257 (451)
T ss_dssp TCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHH
Confidence 4666766411 1 12355555666531 2456666555433 4566642 1 99999999
Q ss_pred HHcCCEEEEecccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCC
Q 002263 645 HDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 645 ~~~g~ll~vD~a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
++||+++|+|.++. ++.+.|. ...|++++ .|+|+ +|.++|++++++++++.+.....
T Consensus 258 ~~~g~~lI~DEv~~----g~g~~g~~~~~~~~~~~pdi~t~--sK~l~-----~G~~iG~v~~~~~~~~~~~~~~~---- 322 (451)
T 3oks_A 258 RKNDVVFIADEVQT----GFARTGAMFACEHEGIDPDLIVT--AKGIA-----GGLPLSAVTGRAEIMDSPHVSGL---- 322 (451)
T ss_dssp HHTTCEEEEECTTT----TTTTTSSSSGGGGGTCCCSEEEE--CGGGG-----TTSSCEEEEEEHHHHTCSCTTSB----
T ss_pred HHcCCEEEEEeccc----CCCccccchhhhhcCCCCCeeee--hhhhh-----CCcceEEEEECHHHHhhhcCCCc----
Confidence 99999999999753 3333221 23688866 49885 36889999999887766532110
Q ss_pred CCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceee
Q 002263 717 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAH 791 (946)
Q Consensus 717 d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~ 791 (946)
.+..+ ++...++++.+.+..+..+++.+ +...+.++++++|++. +... ..+ .+.+
T Consensus 323 ----------~~t~~----~~~~~~aaa~aal~~~~~~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~G~~-- 382 (451)
T 3oks_A 323 ----------GGTYG----GNPIACAAALATIETIESEGLVA---RAQQIEKIMKDRLGRLQAEDDRIGDVRG-RGAM-- 382 (451)
T ss_dssp ----------CCSSS----SCHHHHHHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTE--
T ss_pred ----------CCCCC----CCHHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHHhhCCCeEEEEE-eeEE--
Confidence 01122 23444455566666655554443 3345667777777653 2221 111 1322
Q ss_pred eEEEeccc--ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 792 EFIVDLRG--LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 792 e~v~~~~~--~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+++.. .+........++.++|.++|+.+.... +..+.+||+++...|+++++++++.|++++++
T Consensus 383 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 383 -IAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCG-TYGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp -EEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEEC-TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred -EEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 2333321 000011235689999999999864322 11478999999999999999999999988653
No 288
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.66 E-value=1.6e-15 Score=173.56 Aligned_cols=257 Identities=15% Similarity=0.058 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhhCCCccccc--CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCHH----------HHHHc
Q 002263 522 FNNLGEWLCTITGFDSFSLQ--PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPA----------TAAMC 588 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~--~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~~----------~a~~~ 588 (946)
..++++.+++++|.+...+. .++|++++..++.++. +++|+||++. +.|+.... .+...
T Consensus 61 ~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all--------~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~ 132 (409)
T 3jzl_A 61 RDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGIL--------RPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDF 132 (409)
T ss_dssp HHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHC--------CTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGG
T ss_pred HHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhc--------CCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHc
Confidence 55788899999999876553 6778776644433321 2568999987 76766553 34567
Q ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeC----C-CcccccccCHHHHHHHHHH--cCCEEEEeccccccc
Q 002263 589 GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY----P-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ 661 (946)
Q Consensus 589 G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~----P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a~ 661 (946)
|++++.++.+++|.+|+++|+++++ ++|++|++++ | |.+|.+. |+++|+++||+ +|+++++|+++....
T Consensus 133 G~~~~~v~~~~~g~~d~e~l~~ai~---~~tklV~i~~s~g~p~nptg~v~-~l~~I~~la~~~~~~~~livD~a~~~~~ 208 (409)
T 3jzl_A 133 HIGYSSVPLLENGDVDFPRIAKKMT---PKTKMIGIQRSRGYADRPSFTIE-KIKEMIVFVKNINPEVIVFVDNCYGEFV 208 (409)
T ss_dssp TCEEEECCCCTTSCCCHHHHHHHCC---TTEEEEEEECSCTTSSSCCCCHH-HHHHHHHHHHHHCTTCEEEEECTTCTTT
T ss_pred CCEEEEeCCCCCCCcCHHHHHHhcc---CCCeEEEEECCCCCCCCCcCccc-cHHHHHHHHHhhCCCCEEEEeCCccccc
Confidence 9999999998899999999999996 7899999998 8 5789998 79999999999 999999999864211
Q ss_pred ccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 662 VGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 662 ~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
....|..+|+|+++.++||+|+. .|.|..|++++++++.+.+..+.. ....+...+...+.
T Consensus 209 -~~~~p~~~g~Div~~S~sK~lgg---~~~~~GG~v~~~~~li~~l~~~~~-----------~~~~g~~~g~~~~~---- 269 (409)
T 3jzl_A 209 -EYQEPPEVGADIIAGSLIKNPGG---GLAKTGGYIAGKEALVDLCGYRLT-----------TPGIGREAGASLYS---- 269 (409)
T ss_dssp -SSCCSGGGTCSEEEEETTSGGGT---TTCSSCEEEEECHHHHHHHHHHHS-----------CTTTGGGCCCCTTC----
T ss_pred -ccCCccccCCeEEEECccccCCc---cCCceEEEEEeCHHHHHHHHHHhc-----------cccccccccccHHH----
Confidence 12367778999999999999852 122556999998876655421100 00000001100011
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEE--EecccccccCCCCHHHHHHHHHHC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFI--VDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v--~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
+++.+..+ +-+..+.++...++.++++.|+++ +++ ++++ ++..|..+ |.+. .......+++.|...
T Consensus 270 --~~~~l~gl--~~~~~r~~~~~~~a~~la~~L~~~g~~v-~p~~-~~~~~~~i~~i~l~-----~~~~~~~~~~~L~~~ 338 (409)
T 3jzl_A 270 --LLEMYQGF--FLAPHVTAQAIKGARFTAAMLAEFGVEA-DPVW-DAPRTDLIQSVSFH-----NKEKMVAFAQAIQAA 338 (409)
T ss_dssp --HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCEE-ESCT-TSCCSSSCCEEECS-----CHHHHHHHHHHHHHT
T ss_pred --HHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHhCCCcc-cCCC-CCCCccEEEEEEeC-----CHHHHHHHHHHHHhc
Confidence 11222222 223455667788999999999986 665 5543 22112222 3332 123456788888876
Q ss_pred Cc
Q 002263 819 GF 820 (946)
Q Consensus 819 Gi 820 (946)
..
T Consensus 339 ~~ 340 (409)
T 3jzl_A 339 SP 340 (409)
T ss_dssp SS
T ss_pred Cc
Confidence 53
No 289
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.66 E-value=1.2e-14 Score=163.38 Aligned_cols=340 Identities=16% Similarity=0.171 Sum_probs=213.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCc-ceeecCCCCCC-CCCcHHHHHHHH------hCCccccccCCChhhhh--hhH
Q 002263 28 KFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYN-THVPPVILRNIM------ENPAWYTQYTPYQAEIA--QGR 97 (946)
Q Consensus 28 ~lp~~~~~~se~e~~~~~~~l~~~n~~-~~~~~G~g~~~-~~~p~~i~~~i~------~~~~~~t~~~pyq~e~s--qg~ 97 (946)
.+| +++.+|..|.-.|.+||.++.. +..-.|.|--. ....+-+.|.-. .|.+-+++-.|=.+.-| ..-
T Consensus 40 ~~P--~~g~~d~~ie~~l~~la~mdsnn~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssll~~l 117 (501)
T 3hl2_A 40 KCP--ENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKI 117 (501)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHTTBGGGCSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHHHHHH
T ss_pred CCC--ccCCCHHHHHHHHHHHHhhccCCCcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHHHHHH
Confidence 577 7899999999999999988743 33334555322 334555544322 12233333333333311 111
Q ss_pred HHHHHHHHHHHHHHhCCCCc-ceEEcccHHHHHHHHHHHhccccC-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec
Q 002263 98 LESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 175 (946)
Q Consensus 98 l~~l~e~q~~la~L~g~~~~-~~sl~~~~Ta~~ea~~la~~~~~~-~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~ 175 (946)
.+.+ .-.++..+ |++.. .+.+++++|+++.+++++..-.+. .+++||+++++|.|++..+.. .|++.++++
T Consensus 118 tn~l--~ld~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL----~Gl~Pv~V~ 190 (501)
T 3hl2_A 118 TNSL--VLDIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMIT----AGFEPVVIE 190 (501)
T ss_dssp HHHH--HHHHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHH----TTCEEEEEC
T ss_pred HHHH--HHHHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHH----cCCeEEEEe
Confidence 1111 12455555 99864 466889999999998776431111 249999999999999998754 488888876
Q ss_pred c-----------ccccc-c---CCCEeEEEEEcCC-Cc-eeecchHHHHHHHHhCCcEEEEEecCccccCCC--------
Q 002263 176 L-----------KDIDY-K---SGDVCGVLVQYPG-TE-GEVLDYGDFIKNAHANGVKVVMATDLLALTILK-------- 230 (946)
Q Consensus 176 ~-----------~~l~~-i---~~~t~~v~v~~pn-~~-G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-------- 230 (946)
+ +++++ | +.+..++++++|+ +. |.+.||++|+++||++|++++|+ + ++|.-.
T Consensus 191 p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVD-e--AhGah~~~~~~lp~ 267 (501)
T 3hl2_A 191 NVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVN-N--AYGVQSSKCMHLIQ 267 (501)
T ss_dssp EEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEE-C--TTCTTCHHHHHHHH
T ss_pred eeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEe-C--cchhhhhhhhhhHH
Confidence 5 34454 4 2233444444544 43 36689999999999999999995 2 222211
Q ss_pred CCCCcc-ceEEEecc-ccccccCCCCCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 231 PPGELG-ADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 231 ~~~~~G-aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
..-++| ||+++.|. |.+.+|++ .|++++++ ++++++- .... ||.
T Consensus 268 sA~~~GrAD~vVqS~HK~llvpIG-----G~ii~~~d~e~l~~~~-------~~yP--------------------Gr~- 314 (501)
T 3hl2_A 268 QGARVGRIDAFVQSLDKNFMVPVG-----GAIIAGFNDSFIQEIS-------KMYP--------------------GRA- 314 (501)
T ss_dssp HHHHHSCCCEEEEEHHHHHCCCSS-----CEEEEESCHHHHHHHH-------HTSC--------------------SCB-
T ss_pred HHHhcCCCcEEEecccccceeecC-----ceEEEeCCHHHHHHHH-------HhCC--------------------CCC-
Confidence 112468 99999999 77877864 24555554 4444330 0000 111
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCCCc-CeEEEecCC--------HH
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFF-DTVKVKCAD--------AH 374 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~-~~~~i~~~~--------~~ 374 (946)
|.++.+.+.+++ ..+|.+|++++.++..++++||+++|+++ | -++++.+.- -.+.+.... ..
T Consensus 315 --S~Spsldl~~tL--L~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~g-e~ll~~~~n~is~a~tl~~~~~~~~~~~t 389 (501)
T 3hl2_A 315 --SASPSLDVLITL--LSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN-ERLLHTPHNPISLAMTLKTLDEHRDKAVT 389 (501)
T ss_dssp --CSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCBCCCTTCSSEEEEECTTSCTTTSCHHH
T ss_pred --CCcHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-hhhcCCCCCceeEEEecccccccccccHH
Confidence 124444444443 78899999999999999999999999985 4 455543211 134444321 56
Q ss_pred HHHHHHHHcCCe----eee--------------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 375 AIASAAYKIEMN----LRV--------------------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 375 ~v~~~L~~~GI~----~~~--------------------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+...|..++|. |.. .....+.+......+++|+|.|++.|..
T Consensus 390 ~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~ 456 (501)
T 3hl2_A 390 QLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDR 456 (501)
T ss_dssp HHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 788999988883 110 0124588888889999999999999964
No 290
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.66 E-value=1e-15 Score=175.62 Aligned_cols=299 Identities=11% Similarity=0.072 Sum_probs=176.0
Q ss_pred ccHHHHHHHHHHHHHHhhCCCc--ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEE
Q 002263 516 QGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 593 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv 593 (946)
+|..++...+.+++.+..+.+. ..+.+++|+++... +++.+. .++++|+++...|+.+...+...|.+++
T Consensus 79 ~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~---~~~~~~-----~~gd~Vl~~~p~~~~~~~~~~~~g~~~~ 150 (413)
T 3t18_A 79 EGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRS---AIFSYL-----DEGDPLICHDYYWAPYRKICEEFGRNFK 150 (413)
T ss_dssp TCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH---HHHHHC-----CSSCEEEEESSCCTHHHHHHHHHTCEEE
T ss_pred CCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHH---HHHHhc-----CCCCEEEECCCCcccHHHHHHHhCCeEE
Confidence 5666666667777766655441 22444555555433 334331 2568999999988888888899999999
Q ss_pred EEcC-CCCCCCCHHHHHHHHHhc-CCCeE-EEEEeCC--Cccccccc--CHHHHHHHHH------HcCCEEEEecccccc
Q 002263 594 SVGT-DAKGNINIEELRKAAEAN-RDNLS-TLMVTYP--STHGVYEE--GIDEICKIIH------DNGGQVYMDGANMNA 660 (946)
Q Consensus 594 ~v~~-~~~g~~D~e~L~~~i~~~-~~~t~-~vvvt~P--n~~G~~~~--~i~~I~~ia~------~~g~ll~vD~a~~~a 660 (946)
.+|+ ++++.+|+++|+++++++ .++++ ++++++| |.+|.+.+ .+++|+++|+ ++|+++++|.++. .
T Consensus 151 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~ 229 (413)
T 3t18_A 151 TFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYL-E 229 (413)
T ss_dssp EECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTG-G
T ss_pred EeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccc-c
Confidence 9998 455689999999999731 01455 7888888 57898861 3555666666 8999999999863 1
Q ss_pred cccccC---C-----CccCCC---EEEeCCCcccccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCCC
Q 002263 661 QVGLTS---P-----GYIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 661 ~~gl~~---p-----g~~GaD---i~~~s~hK~f~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
++.-.. + ...+.| +++.+++|+|+. .|.++|++++ ++++.+.+........ + ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~riG~~~~~~~~~~~~~~~~~~~~~~~-------~-~~ 297 (413)
T 3t18_A 230 FAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTA----YGLRSGAAVGISSSKEIIEEFEASLAHSA-------R-CN 297 (413)
T ss_dssp GSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTC----GGGCCEEEEEEESCHHHHHHHHHHHHHHH-------H-HH
T ss_pred ccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCC----cCcCcEEEEEecCCHHHHHHHHHHHHHhh-------h-cc
Confidence 111110 0 012234 666789999864 3677999988 6666554321000000 0 00
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHc----HhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEeccccc
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMG----SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLK 801 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG----~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~ 801 (946)
.++. +.....++..++.... .+.+++..++...+.+++.+.|++. +.+. .+++.++ ++++.
T Consensus 298 ~~~~------~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~~~~~--~~~~~---- 363 (413)
T 3t18_A 298 WSNG------THAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKLTMI--PYFGGFF--TFIPT---- 363 (413)
T ss_dssp TSSC------CHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCB--CCCSSSC--EEEEC----
T ss_pred ccCC------ChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc--CCCceEE--EEeCC----
Confidence 0011 1111111222221110 1223344455667778888888875 4432 2223222 23443
Q ss_pred ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 802 NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 802 ~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
.+..++.+.|.++||.+.. ..+.+||+++..+ ++++ ++.|.+++++++
T Consensus 364 ----~~~~~~~~~l~~~gv~v~~----g~~~iRis~~~~~-~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 364 ----DKAFDIVKDLEKENIFTIP----SAKGIRVAICGVG-EEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp ----SCHHHHHHHHHHTTEECEE----CSSEEEECTTTSC-GGGH---HHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHhCCEEEec----CCCceEEEEeeCC-HHHH---HHHHHHHHHHHh
Confidence 2678999999999998742 2578999988544 3343 555555555543
No 291
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.66 E-value=4.8e-14 Score=158.54 Aligned_cols=265 Identities=12% Similarity=0.094 Sum_probs=181.1
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK-KTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 176 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~g-d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 176 (946)
.++++.+|+++|.++.++.+++|+|.+++.++.++. . +| |+|+++...|+.+...++. .|.+++.++.
T Consensus 61 ~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~-~--~g~d~Vl~~~p~~~~~~~~~~~----~g~~~~~v~~~~~~ 133 (356)
T 1fg7_A 61 KAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFC-E--PGKDAILYCPPTYGMYSVSAET----IGVECRTVPTLDNW 133 (356)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC-C--TTTCEEEECSSSCTHHHHHHHH----HTCEEEECCCCTTS
T ss_pred HHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHh-C--CCCCEEEEeCCChHHHHHHHHH----cCCEEEEeeCCCCC
Confidence 357789999999988899999999988887776653 2 78 9999999999998877653 4778877764
Q ss_pred ----ccccc-cCCCEeEEEEEcC-CCceeecch---HHHHHHHHhCCcEEEEEecCcc-ccC---CCC-CCCccceEEEe
Q 002263 177 ----KDIDY-KSGDVCGVLVQYP-GTEGEVLDY---GDFIKNAHANGVKVVMATDLLA-LTI---LKP-PGELGADIVVG 242 (946)
Q Consensus 177 ----~~l~~-i~~~t~~v~v~~p-n~~G~i~di---~~i~~~a~~~gal~~v~a~~~a-l~~---l~~-~~~~GaDi~v~ 242 (946)
+++++ ++ ++++|++++| |.+|.+.|. ++|+++|+ +|+++++|. ..+ ++. +.. ...++.++++.
T Consensus 134 ~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De-~~~~~~~~~~~~~~~~~~~~~i~~~ 210 (356)
T 1fg7_A 134 QLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADE-AYIEFCPQASLAGWLAEYPHLAILR 210 (356)
T ss_dssp CCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEEC-TTGGGSGGGCSGGGTTTCTTEEEEE
T ss_pred CCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEc-cchhhcCCCcHHHHHhhCCCEEEEe
Confidence 33445 66 8999999998 569999765 55556666 899999943 222 220 111 13457789998
Q ss_pred cc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 243 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 243 s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|. |.|+.| |..+|++++++++.+.+... +.+.+. ..+ +..++.
T Consensus 211 s~sK~~g~~----G~r~G~~~~~~~~~~~l~~~----------------------------~~~~~~---~~~-~~~a~~ 254 (356)
T 1fg7_A 211 TLSKAFALA----GLRCGFTLANEEVINLLMKV----------------------------IAPYPL---STP-VADIAA 254 (356)
T ss_dssp ESSSTTCCG----GGCCEEEEECHHHHHHHHHH----------------------------SCSSCS---CHH-HHHHHH
T ss_pred cchHhhcCc----hhhhEEEEeCHHHHHHHHHh----------------------------cCCCCC---CHH-HHHHHH
Confidence 87 777432 33479999988877654100 001111 111 122222
Q ss_pred HHHHhChhh---HHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeeeee-c----CC
Q 002263 322 YAVYHGPEG---LKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-D----SN 393 (946)
Q Consensus 322 y~~~~g~~G---l~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~-~----~~ 393 (946)
..+...+ +++..++..++.+++.+.|+++|++....+....-+.++++++.++.++|.++||.++.. . ++
T Consensus 255 --~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~g~~~~~~~ 332 (356)
T 1fg7_A 255 --QALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSG 332 (356)
T ss_dssp --HHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEETTHHHHHHHHHHTTEECEECTTSTTCTT
T ss_pred --HHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCC
Confidence 3333444 678888888999999999999864432222222234455545778999999999998762 1 36
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 002263 394 TVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 394 ~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+|+|++ +++|+++++++|+.
T Consensus 333 ~iRis~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 333 CLRITVG---TREESQRVIDALRA 353 (356)
T ss_dssp EEEEECC---CHHHHHHHHHHHHT
T ss_pred eEEEEeC---CHHHHHHHHHHHHh
Confidence 8999987 68999999999974
No 292
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.66 E-value=9.8e-15 Score=167.08 Aligned_cols=269 Identities=13% Similarity=0.175 Sum_probs=179.7
Q ss_pred HHHHHHHHHh------CCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 103 NFQTMIADLT------GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 103 e~q~~la~L~------g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
++++.+++++ +.++.++.+++|+|.+++.++.++ .. +||+|+++...|+++...++ ..|++++.++.
T Consensus 82 ~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l-~~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~ 154 (406)
T 1xi9_A 82 ELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGAL-LD--PGDEILVPGPSYPPYTGLVK----FYGGKPVEYRT 154 (406)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH-CC--TTCEEEEEESCCHHHHHHHH----HTTCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHh-CC--CCCEEEEcCCCCccHHHHHH----HcCCEEEEeec
Confidence 3445555555 345678989999998888777665 23 78999999999999887764 35777776654
Q ss_pred ----------ccccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC----CCCC--c
Q 002263 177 ----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK----PPGE--L 235 (946)
Q Consensus 177 ----------~~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~----~~~~--~ 235 (946)
++|++ +++++++|++++| |.+|.+.+ +++|.++|+++|+++++|. ..+..... +... .
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De-~~~~~~~~~~~~~~~~~~~ 233 (406)
T 1xi9_A 155 IEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDE-IYDLMTYEGEHISPGSLTK 233 (406)
T ss_dssp EGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEEC-TTTTCBSSSCCCCHHHHCS
T ss_pred CCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEc-CccccccCCCCCCHHHcCC
Confidence 34555 6778999999988 67999864 9999999999999999953 22222111 1122 3
Q ss_pred cc-eEEEecc-ccccccCCCCCCceEEEE--Ech----hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 236 GA-DIVVGSA-QRFGVPMGYGGPHAAFLA--TSQ----EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 236 Ga-Di~v~s~-k~lg~P~~~GGP~~g~l~--~~~----~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
+. |++++|. |.|+.| |..+|+++ +++ ++.+.+.. .++...+.|
T Consensus 234 ~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~l~~~l~~-------------------------~~~~~~~~~ 284 (406)
T 1xi9_A 234 DVPVIVMNGLSKVYFAT----GWRLGYMYFVDPENKLSEVREAIDR-------------------------LARIRLCPN 284 (406)
T ss_dssp SSCEEEEEESTTTTCCG----GGCCEEEEEECTTCTTHHHHHHHHH-------------------------HHHHTCCSC
T ss_pred CceEEEEeccccccCCC----ccEEEEEEEecCchhHHHHHHHHHH-------------------------HHHhhcCCC
Confidence 66 8899887 877422 22378988 777 66554410 000001222
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCC--CcCeEEEec--C-CHHHHHHHHH
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLP--FFDTVKVKC--A-DAHAIASAAY 381 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~--~~~~~~i~~--~-~~~~v~~~L~ 381 (946)
. ....++.+++ . .+.++++++.++..++.+++.+.|+++ | +++.... .+--+.+.. . +..++.++|.
T Consensus 285 ~---~~~~a~~~~l--~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 357 (406)
T 1xi9_A 285 T---PAQFAAIAGL--T-GPMDYLKEYMKKLKERRDYIYKRLNEIPG-ISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVL 357 (406)
T ss_dssp S---HHHHHHHHHH--H-SCCHHHHHHHHHHHHHHHHHHHHHHTSTT-EECCCCCBSSEECCEECSCSCSSHHHHHHHHH
T ss_pred H---HHHHHHHHHH--h-CCcHHHHHHHHHHHHHHHHHHHHHHhCCC-CeeecCCeeEEEEEecCccCCCCHHHHHHHHH
Confidence 2 1122222221 2 345668889999999999999999998 6 8876422 111112221 1 2778999887
Q ss_pred -HcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 382 -KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 382 -~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++||.+... .++.+|+|+. +++++++++++.|..
T Consensus 358 ~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~ 398 (406)
T 1xi9_A 358 HNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEK 398 (406)
T ss_dssp HHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHH
T ss_pred HhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHH
Confidence 889987643 1578999998 899999999999863
No 293
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.66 E-value=2.8e-14 Score=164.45 Aligned_cols=264 Identities=11% Similarity=0.003 Sum_probs=177.4
Q ss_pred HHHHHhCC--CCc-ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-------
Q 002263 107 MIADLTGL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL------- 176 (946)
Q Consensus 107 ~la~L~g~--~~~-~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~------- 176 (946)
.+.+..|. ++. ++.+++|+|.++++++.++. . +||+|+++...|+.+...++ ..|.+++.++.
T Consensus 89 ~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~--~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~ 161 (429)
T 1yiz_A 89 LYSQLVDRTINPMTEVLVTVGAYEALYATIQGHV-D--EGDEVIIIEPFFDCYEPMVK----AAGGIPRFIPLKPNKTGG 161 (429)
T ss_dssp HHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHC-C--TTCEEEEEESCCTTHHHHHH----HTTCEEEEEECBCCCSSS
T ss_pred HHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhc-C--CCCEEEEcCCCchhHHHHHH----HcCCEEEEEeCCcccccc
Confidence 33344474 456 78899999988887776652 2 78999999999998887764 35777776654
Q ss_pred -----------ccccc-cCCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccc----cC-CCC----
Q 002263 177 -----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLAL----TI-LKP---- 231 (946)
Q Consensus 177 -----------~~l~~-i~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al----~~-l~~---- 231 (946)
++|++ +++++++|++++| |.+|.+. ++++|+++|+++|+++++|. ..+. +. ..+
T Consensus 162 ~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~ 240 (429)
T 1yiz_A 162 TISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE-VYEHMVFEPFEHIRICTL 240 (429)
T ss_dssp SEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTCBCTTSCCCCGGGS
T ss_pred cccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEec-cccccccCCCCCcChhhc
Confidence 23445 6778999999988 6799987 59999999999999999943 2221 10 001
Q ss_pred CCCccceEEEecc-ccccccCCCCCCc--eEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCc
Q 002263 232 PGELGADIVVGSA-QRFGVPMGYGGPH--AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 308 (946)
Q Consensus 232 ~~~~GaDi~v~s~-k~lg~P~~~GGP~--~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni 308 (946)
+..++.|+++.|. |.|+ +|| +|++++++++++.+... +...| .
T Consensus 241 ~~~~~~~~~~~s~sK~~~------~~G~r~G~~~~~~~~~~~l~~~--------------------------~~~~~--~ 286 (429)
T 1yiz_A 241 PGMWERTITIGSAGKTFS------LTGWKIGWAYGPEALLKNLQMV--------------------------HQNCV--Y 286 (429)
T ss_dssp TTTGGGEEEEEEHHHHHT------CGGGCCEEEESCHHHHHHHHHH--------------------------HHTTT--C
T ss_pred cCCcCceEEEecchhccC------CCCcceEEEEeCHHHHHHHHHH--------------------------Hhhcc--c
Confidence 1256899999998 8764 234 79999988877654100 00001 1
Q ss_pred cchHH-HHHHHHHHHHHH----hC--hhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC----------
Q 002263 309 CTAQA-LLANMAAMYAVY----HG--PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA---------- 371 (946)
Q Consensus 309 ~t~~~-l~a~~aa~y~~~----~g--~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~---------- 371 (946)
+.+.. ..+..+++ .. ++ .+.++++.++..++.++|.+.|+++| +++.......-+.+.++
T Consensus 287 ~~~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~ 363 (429)
T 1yiz_A 287 TCATPIQEAIAVGF--ETELKRLKSPECYFNSISGELMAKRDYMASFLAEVG-MNPTVPQGGYFMVADWSSLDSKVDLTQ 363 (429)
T ss_dssp CCCHHHHHHHHHHH--HHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHT-CEEEECSBSSEEEEECCSSCTTTTCCS
T ss_pred CCChHHHHHHHHHH--hcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEEcccccccccccc
Confidence 11112 21222222 22 13 55688899999999999999999887 77653211112334432
Q ss_pred ----C-HHHHHHHHH-HcCCeeeee---c--------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 372 ----D-AHAIASAAY-KIEMNLRVV---D--------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 372 ----~-~~~v~~~L~-~~GI~~~~~---~--------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. ..++.++|. ++||.+... . ++.+|+|+. +++++|+++++.|..
T Consensus 364 ~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~ 424 (429)
T 1yiz_A 364 ETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENLQKAAEILRK 424 (429)
T ss_dssp SSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 2 567888886 789987532 1 578999998 489999999999863
No 294
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.65 E-value=8e-15 Score=165.52 Aligned_cols=276 Identities=13% Similarity=0.149 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 176 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 176 (946)
..++++.+|+++|.+ ++.++++||.+.++++.+++.. +||+|+++...|+++...++. .|++++.+|+
T Consensus 37 ~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~~~--~gd~Vi~~~~~~~~~~~~~~~----~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 37 VTELEDRLADFVGAK--YCISCANGTDALQIVQMALGVG--PGDEVITPGFTYVATAETVAL----LGAKPVYVDIDPRT 108 (367)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCTHHHHHHHH----TTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhCCC--CcCEEEECCCccHHHHHHHHH----cCCEEEEEecCCcc
Confidence 567889999999987 5889999998888877766433 889999999999999888643 5888888764
Q ss_pred -----ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC---CCCccceEEEec---c
Q 002263 177 -----KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGS---A 244 (946)
Q Consensus 177 -----~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~---~~~~GaDi~v~s---~ 244 (946)
+++++ +++++++|++. |.+|.+.|+++|.++|+++|+++++|+ ..+.+.... .+.+| |+++.| +
T Consensus 109 ~~~d~~~l~~~i~~~~~~v~~~--~~~G~~~~~~~i~~la~~~~~~li~D~-a~~~g~~~~~~~~~~~~-di~~~Sf~~~ 184 (367)
T 3nyt_A 109 YNLDPQLLEAAITPRTKAIIPV--SLYGQCADFDAINAIASKYGIPVIEDA-AQSFGASYKGKRSCNLS-TVACTSFFPS 184 (367)
T ss_dssp CSBCGGGTGGGCCTTEEEECCB--CGGGCCCCHHHHHHHHHHTTCCBEEEC-TTTTTCEETTEETTSSS-SEEEEECCTT
T ss_pred CCcCHHHHHHhcCcCCcEEEee--CCccChhhHHHHHHHHHHcCCEEEEEC-ccccCCeECCeeccCCC-CEEEEECCCC
Confidence 34555 77889988844 468999999999999999999999953 334443322 23444 999998 3
Q ss_pred ccccccCCCCCCceEEEEEc-hhhhhcCCCce-EeEeecCCCCcceEEecccccccccccccC-CCccchHHHHHHHHHH
Q 002263 245 QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRI-VGVSIDSSGKPALRVAMQTREQHIRRDKAT-SNICTAQALLANMAAM 321 (946)
Q Consensus 245 k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~-~G~s~d~~g~~~~~l~l~tre~~irre~aT-sni~t~~~l~a~~aa~ 321 (946)
|.|+.+ | .+|++.++ +++.+.+.... .|.. ..|.. ...|. ... ..+.+ ++
T Consensus 185 K~l~~~-g----~gg~~~~~~~~l~~~~~~~~~~g~~------~~~~~----------~~~g~~~~~---~~~~a---a~ 237 (367)
T 3nyt_A 185 APLGCY-G----DGGAIFTNDDELATAIRQIARHGQD------RRYHH----------IRVGVNSRL---DTLQA---AI 237 (367)
T ss_dssp SSSCCS-S----CCEEEEESCHHHHHHHHHHTBTTEE------ETTEE----------CSCCCBCCC---CHHHH---HH
T ss_pred CcCCCc-C----ceeEEEeCCHHHHHHHHHHHhcCCC------cCcee----------eccCcCCCc---cHHHH---HH
Confidence 776421 1 14677774 55554432110 0100 00100 00111 111 12211 11
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-----CCcCeEEEecCCHHHHHHHHHHcCCeeeeec-----
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-----PFFDTVKVKCADAHAIASAAYKIEMNLRVVD----- 391 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-----~~~~~~~i~~~~~~~v~~~L~~~GI~~~~~~----- 391 (946)
.+.. .+.++++.++..++++++++.|+++| +.+... ..+..+.+..++..++.+.|.++||.++...
T Consensus 238 ~~~~--l~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~~~~~~~~~~~ 314 (367)
T 3nyt_A 238 LLPK--LEIFEEEIALRQKVAAEYDLSLKQVG-IGTPFIEVNNISVYAQYTVRMDNRESVQASLKAAGVPTAVHYPIPLN 314 (367)
T ss_dssp HHHH--HHTHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTEECCCSSEEEECSSHHHHHHHHHHHTCCCBCSCSSCGG
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHhccCC-eeccCCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCceeccCCCccc
Confidence 1111 23567778888899999999999987 665421 1233456665567889999999999764211
Q ss_pred -------------------CCeEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 392 -------------------SNTVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 392 -------------------~~~lris~~~~~t~edid~ll~~l~~~ 418 (946)
...++++++...|++|++++++++..-
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 315 KQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp GSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred cChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 246899999999999999999999854
No 295
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.65 E-value=1.7e-14 Score=166.00 Aligned_cols=299 Identities=13% Similarity=0.154 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHhh-C-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCCE------
Q 002263 521 MFNNLGEWLCTIT-G-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------ 591 (946)
Q Consensus 521 ~~~el~~~la~l~-G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~~------ 591 (946)
...++++.+++++ | .+...+..++|+++...++..++.+. . ++ +|++ ..+.|+....++...|.+
T Consensus 85 ~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~-~----~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~ 158 (426)
T 1sff_A 85 PYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT-K----RS-GTIAFSGAYHGRTHYTLALTGKVNPYSAG 158 (426)
T ss_dssp HHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH-T----CC-EEEEETTCCCCSSHHHHHHSSCCTTTTTT
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhh-C----CC-eEEEECCCcCCCchHhhhhcCCccccccc
Confidence 3567888999998 5 21223566777777755555344442 1 23 5665 456778887777776654
Q ss_pred -------EEEEcCCC-----CCCCCHHHHHHHHHhc--CCCeEEEEEeC-CCcccccccC----HHHHHHHHHHcCCEEE
Q 002263 592 -------IVSVGTDA-----KGNINIEELRKAAEAN--RDNLSTLMVTY-PSTHGVYEEG----IDEICKIIHDNGGQVY 652 (946)
Q Consensus 592 -------vv~v~~~~-----~g~~D~e~L~~~i~~~--~~~t~~vvvt~-Pn~~G~~~~~----i~~I~~ia~~~g~ll~ 652 (946)
++.++++. ++.+|+++|++++++. .+++++|+++. ++.+|.+. + +++|.++|++||++++
T Consensus 159 ~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~-~~~~~l~~l~~l~~~~~~~li 237 (426)
T 1sff_A 159 MGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYA-SSPAFMQRLRALCDEHGIMLI 237 (426)
T ss_dssp SCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCB-CCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCccc-CCHHHHHHHHHHHHHcCCEEE
Confidence 77788753 2347999999999741 24677777743 44589655 5 9999999999999999
Q ss_pred EecccccccccccCC---Cc--cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCC
Q 002263 653 MDGANMNAQVGLTSP---GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL 727 (946)
Q Consensus 653 vD~a~~~a~~gl~~p---g~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~ 727 (946)
+|+++. .++-.... .. ..+|++++ +|+|+ +|.++|++++++++.+.+..... .
T Consensus 238 ~De~~~-~~~~~g~~~~~~~~~~~~di~s~--sK~~~-----~GlriG~~~~~~~~~~~l~~~~~--------------~ 295 (426)
T 1sff_A 238 ADEVQS-GAGRTGTLFAMEQMGVAPDLTTF--AKSIA-----GGFPLAGVTGRAEVMDAVAPGGL--------------G 295 (426)
T ss_dssp EECTTT-TTTTTSSSSGGGGTTSCCSEEEE--CGGGG-----TSSCCEEEEEEHHHHTTSCTTSB--------------C
T ss_pred Eechhh-ccCcccchhhhhhcCCCCCEEEE--ccccc-----CCCceEEEEEcHHHHhhhccCCc--------------C
Confidence 999865 22110111 11 24787754 69985 25678999999877665532100 0
Q ss_pred CCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccc
Q 002263 728 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN 802 (946)
Q Consensus 728 ~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~ 802 (946)
...+. +....+++.+.+..+..+.+ .++...+++++.++|++. +... ..+ .+.+ +.+++.....
T Consensus 296 ~~~~~----~~~~~~a~~aal~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~ 364 (426)
T 1sff_A 296 GTYAG----NPIACVAALEVLKVFEQENL---LQKANDLGQKLKDGLLAIAEKHPEIGDVRG-LGAM---IAIELFEDGD 364 (426)
T ss_dssp CSSSS----CHHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHTCTTEEEEEE-ETTE---EEEEEBGGGC
T ss_pred cCCCC----CHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhCCCeEEEEE-EEEE---EEEEEecCcc
Confidence 11121 22333344455555544433 344556777888888763 3321 112 1322 3455531100
Q ss_pred ---cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 803 ---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 803 ---~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
..+.+..++.++|.++|+.+..... ..+.+|++++..++++|+++++++|+++++++
T Consensus 365 ~~~~~~~~~~~l~~~l~~~gi~v~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 365 HNKPDAKLTAEIVARARDKGLILLSCGP-YYNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp TTSBCHHHHHHHHHHHHHTTEECEEEST-TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCChHHHHHHHHHHHHCCcEEecCCC-CCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 0123467899999999998643221 14889999988899999999999999988765
No 296
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.65 E-value=4e-16 Score=183.08 Aligned_cols=293 Identities=11% Similarity=0.017 Sum_probs=186.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCc----ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHh----hcCC
Q 002263 96 GRLESLLNFQTMIADLTGLPMS----NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR----ADGF 167 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~~----~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~----a~~~ 167 (946)
+..+...++++.+++++|++.. ++.+ .+|+++..+++.++ +. +||+|++++..|+++...+... +...
T Consensus 87 ~~~~le~~~~~~~a~~~g~~~~~~~~~V~~-~sGs~an~~~~~al-l~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~ 162 (483)
T 1rv3_A 87 HIDELETLCQKRALQAYGLDPQCWGVNVQP-YSGSPANFAVYTAL-VE--PHGRIMGLDLPDGGHLTHGFMTDKKKISAT 162 (483)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTEEEECCC-SSHHHHHHHHHHHH-TC--TTCEEEEECGGGTCCGGGCCBCSSCBCSHH
T ss_pred hHHHHHHHHHHHHHHHhCCCcccCceEEEE-CCcHHHHHHHHHHh-cC--CCCEEEEecCccCcCcchhhhhcccCcccc
Confidence 3445566778999999999863 3444 45556666656665 33 8999999999998776543110 0001
Q ss_pred C--eEEEEe---------ccccccc-cC-CCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCC-CC
Q 002263 168 D--IKVVVS---------DLKDIDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP 232 (946)
Q Consensus 168 g--i~v~~~---------~~~~l~~-i~-~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~-~~ 232 (946)
| ++++.+ |+++|++ +. +++++|++ ++ |+. .+.|+++|.++|+++|+++++|. .++.+... ..
T Consensus 163 G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~-ah~~g~~~~~~ 239 (483)
T 1rv3_A 163 SIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADM-AHISGLVVAGV 239 (483)
T ss_dssp HHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEEC-TTTHHHHHHTS
T ss_pred cceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEc-cchhcccccCC
Confidence 1 344433 2345666 65 68999998 65 445 88899999999999999999953 22332211 11
Q ss_pred CCc---cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccc--cccCC
Q 002263 233 GEL---GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR--DKATS 306 (946)
Q Consensus 233 ~~~---GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr--e~aTs 306 (946)
..+ ++|++++|+ |+|+ ||..|++++++++.+ +. +..|.. ..| .+..+-+...+ -.||+
T Consensus 240 ~~~p~~~~div~~s~~K~l~------GprgG~i~~~~~~~~-~~-~~~g~~------~~y--~~~~~~~~~~~~~~~g~~ 303 (483)
T 1rv3_A 240 VPSPFEHCHVVTTTTHKTLR------GCRAGMIFYRRGVRS-VD-PKTGKE------ILY--NLESLINSAVFPGLQGGP 303 (483)
T ss_dssp SCCGGGTCSEEEEESSGGGC------CCSCEEEEEECSBCC---------C------CBC--CHHHHHHHHHTTTTCCSC
T ss_pred CCCCCCCCcEEEecCcccCC------CCCceEEEEcchhhh-hc-cccCcc------hhh--HHHHHhhhhcCCcccCCc
Confidence 122 799999998 7664 444589999987543 32 111110 001 11000000000 13455
Q ss_pred CccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC--C--HHHHHHHHH
Q 002263 307 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAY 381 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~--~--~~~v~~~L~ 381 (946)
+. ..+.++.+++ ......+++++.++..+++++|++.|+++| ++++.. .....+.+.+. + ..++.+.|.
T Consensus 304 ~~---~~iaal~~Al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~ 377 (483)
T 1rv3_A 304 HN---HAIAGVAVAL--KQAMTPEFKEYQRQVVANCRALSAALVELG-YKIVTGGSDNHLILVDLRSKGTDGGRAEKVLE 377 (483)
T ss_dssp CH---HHHHHHHHHH--HHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHH
T ss_pred cH---HHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHhcC-CEeccCCCCCceEEEeccCCCCCHHHHHHHHH
Confidence 54 3344444444 455556889999999999999999999997 998743 11122344442 2 678889999
Q ss_pred HcCCeee----ee-----cCCeEEEEeccCCC----HHHHHHHHHHHhC
Q 002263 382 KIEMNLR----VV-----DSNTVTASFDETTT----LEDVDKLFIVFAG 417 (946)
Q Consensus 382 ~~GI~~~----~~-----~~~~lris~~~~~t----~edid~ll~~l~~ 417 (946)
+.||.++ .- .++.+|+|+..++| ++|++++++.|..
T Consensus 378 ~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~ 426 (483)
T 1rv3_A 378 ACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHR 426 (483)
T ss_dssp HTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred hCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHH
Confidence 9999886 21 24689999998888 9999999999863
No 297
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.65 E-value=1.4e-15 Score=170.63 Aligned_cols=290 Identities=11% Similarity=0.098 Sum_probs=174.4
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHHHcCCEEEEEcCC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 598 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~~~G~~vv~v~~~ 598 (946)
..++++++++++|.+.. +..++|++++..++.++. .+| .+++|+++...|..... .+...|++++.++.
T Consensus 49 ~~~l~~~la~~~~~~~~-i~~~~G~~a~~~al~~~~----~~g--d~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~- 120 (357)
T 3lws_A 49 IEPFEQKFADVLGMDDA-VFFPSGTMAQQVALRIWS----DET--DNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA- 120 (357)
T ss_dssp HHHHHHHHHHHHTCSEE-EEESCHHHHHHHHHHHHH----HHH--TCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC-
T ss_pred HHHHHHHHHHHhCCCcE-EEecCcHHHHHHHHHHHh----hcC--CCcEEEecccceeeeeccchhhhccCcEEEEecC-
Confidence 45788999999998764 444677766644443332 222 12278887766543222 35667999999985
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cc-ccccc--CHHHHHHHHHHcCCEEEEecccc-cccccccCCC---cc
Q 002263 599 AKGNINIEELRKAAEANRDNLSTLMVTYPS-TH-GVYEE--GIDEICKIIHDNGGQVYMDGANM-NAQVGLTSPG---YI 670 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~-G~~~~--~i~~I~~ia~~~g~ll~vD~a~~-~a~~gl~~pg---~~ 670 (946)
+++.+|+++|+++. ++++|++++|+ ++ |.+.+ ++++|+++|++||+++|+|+++. ........+. ..
T Consensus 121 ~~~~~d~~~l~~~~-----~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 195 (357)
T 3lws_A 121 ADRLMTLDEIKALP-----DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAG 195 (357)
T ss_dssp TTSCCCHHHHHTCC-----SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHT
T ss_pred CCCCcCHHHHhcCc-----CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHh
Confidence 56789999998762 38899999996 44 87652 59999999999999999999864 1111111221 13
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 750 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~ 750 (946)
++|+++.++||+|+ ||+.|+++.++++.+.+.... . ...+++.. ....++++.+.+..
T Consensus 196 ~~d~~~~s~sK~~~------~~~gg~~~~~~~~~~~~~~~~--~----------~~~~~~~~----~~~~~~~~~~~l~~ 253 (357)
T 3lws_A 196 LFDSIYISFYKGLG------GIAGAILAGPAAFCQTARIWK--R----------RYGGDLIS----LYPYIVSADYYYEL 253 (357)
T ss_dssp TSSEEEEESSSTTC------CSSCEEEEECHHHHHHHHHHH--H----------HTTCCCSC----CHHHHHHHHHHHHH
T ss_pred cCCEEEEeccccCC------CCceEEEEcCHHHHHHHHHHH--H----------HhcCCccc----chHHHHHHHHHHHH
Confidence 58999999999984 343488888876654432000 0 00011111 11112222233332
Q ss_pred HcHhhHHHHHHHHHHHHHHHHHHHhccCCeee-ccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 002263 751 MGSKGLTEASKIAILNANYMAKRLEKHYPILF-RGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 829 (946)
Q Consensus 751 lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~-~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~ 829 (946)
+ .+..++..++++++.+.|++...+.+ ..+.+ .+-+.++++... ..+..++.+.|.++||.+....++.
T Consensus 254 ~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~l~~~Gi~v~~g~~~~ 323 (357)
T 3lws_A 254 R-----KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPV--SNMFHLHFDGQA---ADISPKLEQVQEETGLGFVGYLVDK 323 (357)
T ss_dssp H-----TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCS--SSEEEEEEESCH---HHHHHHHHHHHHHHCEESCSCCEEC
T ss_pred H-----HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCc--ceEEEEEecCCh---HHHHHHHHHHHHhcCeEEecccccC
Confidence 1 12223345678899999987533322 11111 122455654200 0125788999999999875433222
Q ss_pred CC--EEEEEcCCC---CCHHHHHHHHHHHHHH
Q 002263 830 PG--TLMIEPTES---ESKEELDRYCDALISI 856 (946)
Q Consensus 830 ~~--~lri~~t~~---~t~~eid~~~~aL~~i 856 (946)
++ .+|+++... .+.+++++.++.|.++
T Consensus 324 ~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 324 DGYCSTEISVGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence 34 788887643 5778888887777654
No 298
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.65 E-value=8.7e-15 Score=167.15 Aligned_cols=323 Identities=13% Similarity=0.018 Sum_probs=201.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCC-cceEE-cccHHHHHHHHHHHhc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM-SNASL-LDEGTAAAEAMAMCNN 137 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~-~~~sl-~~~~Ta~~ea~~la~~ 137 (946)
+.| +..+|+.+.+.+.+...-...+..+.+ ...+...++++.+++++|.+. .++.+ ++|+|.++++++.++.
T Consensus 45 ~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~----~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~ 118 (398)
T 2fyf_A 45 GSG--PSKVRLEQLQTLTTTAAALFGTSHRQA----PVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI 118 (398)
T ss_dssp CSS--SCCCCHHHHHGGGTTTTTTTTSCTTSH----HHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC
T ss_pred cCC--CCCCCHHHHHHHhhcCCCccCcCcCCH----HHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc
Confidence 455 445888887666541000001111112 224667789999999999974 47777 8999988887777652
Q ss_pred cccCCCCEEEEcCCCCHHHHH-HHHHhhcCCCeEEEEecccc---ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHH
Q 002263 138 IQKGKKKTFIIASNCHPQTID-ICITRADGFDIKVVVSDLKD---IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAH 211 (946)
Q Consensus 138 ~~~~~gd~vvv~~~~Hps~~~-~~~~~a~~~gi~v~~~~~~~---l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~ 211 (946)
. +| .++++...|..... ....+ ..|.+++.++.++ ... ++++|++|++++| |.+|.+.|+++|.++
T Consensus 119 -~--~g-v~~v~~~~~~~~~~~~~~~~--~~g~~~~~v~~~~g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~-- 190 (398)
T 2fyf_A 119 -D--KR-SLHLTYGEFSAKFASAVSKN--PFVGEPIIITSDPGSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS-- 190 (398)
T ss_dssp -S--SC-EEEEECSHHHHHHHHHHHHC--TTSCCCEEEECCTTCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC--
T ss_pred -C--CC-eEEEeCCHHHHHHHHHHHHh--CCCCceEEEecCCCCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh--
Confidence 2 44 34556667754322 22211 2366666666531 111 5678999999887 789999999999887
Q ss_pred hCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceE-eEeecCCCCcceE
Q 002263 212 ANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIV-GVSIDSSGKPALR 289 (946)
Q Consensus 212 ~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~-G~s~d~~g~~~~~ 289 (946)
+|+++++|+ ..+.+.... .-.++|++++++ |.|+.| +++|++++++++++++..... |. ..+.|
T Consensus 191 -~~~~vivD~-a~~~~~~~~-~~~~~di~~~s~sK~~~~~-----gg~g~l~~~~~~~~~l~~~~~~~~-----~~~~~- 256 (398)
T 2fyf_A 191 -DDALVVIDA-TSGAGGLPV-DIAETDAYYFAPQKNFASD-----GGLWLAIMSPAALSRIEAIAATGR-----WVPDF- 256 (398)
T ss_dssp -C-CEEEEEC-TTTTTTSCC-CGGGCSEEEECTTSTTCSC-----SSEEEEEECHHHHHHHHHHHHTTC-----CCCGG-
T ss_pred -cCCeEEEEe-ccccCCccc-CcccCcEEEEecCcccCCC-----CceEEEEECHHHHHHhhcccccCC-----CCCcE-
Confidence 799999953 334443221 112589999998 766532 258999999988766510000 00 00000
Q ss_pred Eecccccccc--cccccCCCccchHHHHHHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHhcC-CCEEEcC-CC--C
Q 002263 290 VAMQTREQHI--RRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKL-GTVEVQG-LP--F 362 (946)
Q Consensus 290 l~l~tre~~i--rre~aTsni~t~~~l~a~~aa~y~~~~g~~G-l~~i~~~~~~~a~~l~~~L~~~-g~~~~~~-~~--~ 362 (946)
+......+.. .+..+|+|+ ....++.+++ .++..+| ++++.++..++++++.+.|+++ | +++.. .+ .
T Consensus 257 ~~~~~~~~~~~~~~~~~t~~~---~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~ 330 (398)
T 2fyf_A 257 LSLPIAVENSLKNQTYNTPAI---ATLALLAEQI--DWLVGNGGLDWAVKRTADSSQRLYSWAQERPY-TTPFVTDPGLR 330 (398)
T ss_dssp GCHHHHHHHHTTTCCSSCCCH---HHHHHHHHHH--HHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTT-EEESCCSGGGB
T ss_pred EehHHHhhhcccCCCCCCCCH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHHcCC-ceeccCChhhc
Confidence 0000000000 011234444 3344444444 4444556 8999999999999999999998 6 99874 22 2
Q ss_pred cC-eEEEecC-C--HHHHHHHHHHcCCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 363 FD-TVKVKCA-D--AHAIASAAYKIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 363 ~~-~~~i~~~-~--~~~v~~~L~~~GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.+ .+.+.++ + +.++.+.|.++||.++.- .++.+|+|++.++|++|+++++++|+
T Consensus 331 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~ 392 (398)
T 2fyf_A 331 SQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVD 392 (398)
T ss_dssp CSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence 33 4556664 2 789999999999988541 24789999999999999999999986
No 299
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.65 E-value=2.9e-14 Score=163.50 Aligned_cols=266 Identities=13% Similarity=0.083 Sum_probs=177.9
Q ss_pred HHHHHhCC--CCc-ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-------
Q 002263 107 MIADLTGL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL------- 176 (946)
Q Consensus 107 ~la~L~g~--~~~-~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~------- 176 (946)
.+.+.+|. ++. ++.+++|+|.+++.++.++. . +||+|+++...|+++...++ ..|++++.++.
T Consensus 74 ~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~-~--~gd~Vl~~~~~y~~~~~~~~----~~g~~~~~v~~~~~~~~~ 146 (411)
T 2o0r_A 74 QRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLV-E--PGSEVLLIEPFYDSYSPVVA----MAGAHRVTVPLVPDGRGF 146 (411)
T ss_dssp HHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHC-C--TTCEEEEEESCCTTHHHHHH----HTTCEEEEEECEEETTEE
T ss_pred HHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhc-C--CCCEEEEeCCCcHhHHHHHH----HcCCEEEEeeccccccCC
Confidence 33344475 455 78899999988887766652 3 78999999999999877654 35777766553
Q ss_pred ----ccccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-----CCC----CCccce
Q 002263 177 ----KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KPP----GELGAD 238 (946)
Q Consensus 177 ----~~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-----~~~----~~~GaD 238 (946)
++|++ +++++++|++++| |.+|.+.| +++|+++|+++|+++++|. ..+.... .+. ...+.|
T Consensus 147 ~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (411)
T 2o0r_A 147 ALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDE-VYEHLVFDHARHLPLAGFDGMAERT 225 (411)
T ss_dssp ECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred CCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEc-cccccccCCCCCcChhhccCCCCCE
Confidence 34555 6778999999988 67999865 6999999999999999953 2232111 111 136789
Q ss_pred EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHH
Q 002263 239 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 317 (946)
Q Consensus 239 i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~ 317 (946)
++++|. |.|+.| |--+|++++++++.+.+... + .....+.|. ....++
T Consensus 226 i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~l~~~--------------------~----~~~~~~~~~---~~~~a~ 274 (411)
T 2o0r_A 226 ITISSAAKMFNCT----GWKIGWACGPAELIAGVRAA--------------------K----QYLSYVGGA---PFQPAV 274 (411)
T ss_dssp EEEEEHHHHTTCT----TTCEEEEECCHHHHHHHHHH--------------------H----HHHTSCCCT---THHHHH
T ss_pred EEEeechhhcCCc----cceEEEEeeCHHHHHHHHHH--------------------H----hhccCCCCh---HHHHHH
Confidence 999998 776422 22389999988877654110 0 000111121 112222
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC-----CHHHHHHHHH-HcCCeeeee-
Q 002263 318 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-----DAHAIASAAY-KIEMNLRVV- 390 (946)
Q Consensus 318 ~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-----~~~~v~~~L~-~~GI~~~~~- 390 (946)
.+++ . .+.+.++++.++..++.+++.+.|+++| +++.......-+.+.++ +..++.++|. ++||.+...
T Consensus 275 ~~~l--~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 350 (411)
T 2o0r_A 275 ALAL--D-TEDAWVAALRNSLRARRDRLAAGLTEIG-FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMS 350 (411)
T ss_dssp HHHH--H-HCHHHHHHHHHHHHHHHHHHHHHHHHHT-CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGG
T ss_pred HHHH--h-CChHHHHHHHHHHHHHHHHHHHHHHHcC-CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChh
Confidence 2222 2 2366788899999999999999999887 88764321112334443 2678888886 679987531
Q ss_pred ----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 ----------------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ----------------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++.+|+|+. ++++|++++++.|..
T Consensus 351 ~f~~~~~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~ 391 (411)
T 2o0r_A 351 AFCDPAAGQASQQADVWNHLVRFTFC--KRDDTLDEAIRRLSV 391 (411)
T ss_dssp GGSCCC--------CCGGGCEEEECC--SCHHHHHHHHHHHGG
T ss_pred hhCCCccccccccccCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 1357999986 489999999999974
No 300
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.65 E-value=1.1e-14 Score=168.07 Aligned_cols=288 Identities=14% Similarity=0.158 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC---------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 590 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~--------- 590 (946)
...++.++++++++-....++.++|++++++++.+++.+. ++++||+ ..+.||....+....|.
T Consensus 93 ~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 166 (427)
T 3fq8_A 93 LENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYT------GRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPS 166 (427)
T ss_dssp HHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCS
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEECCCcCCCCHHHHHhcCCcccccCCCC
Confidence 4557889999998622234667888888776666556542 2455664 56778766543222221
Q ss_pred ----------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC----HHHHHHHHHHcCCEEEEec
Q 002263 591 ----------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYMDG 655 (946)
Q Consensus 591 ----------~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~----i~~I~~ia~~~g~ll~vD~ 655 (946)
+++.+|.+ |+++|+++++++.+++++|+++.++ +.|.+. + +++|+++|++||+++++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~-~~~~~l~~l~~l~~~~~~~li~DE 240 (427)
T 3fq8_A 167 SPGVPKKTTANTLTTPYN-----DLEAVKALFAENPGEIAGVILEPIVGNSGFIV-PDAGFLEGLREITLEHDALLVFDE 240 (427)
T ss_dssp CSSSCHHHHTTEEEEETT-----CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBC-CCTTHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEec
Confidence 24444432 8999999998765688888887664 567776 5 9999999999999999999
Q ss_pred ccccccccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCC
Q 002263 656 ANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL 727 (946)
Q Consensus 656 a~~~a~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~ 727 (946)
++. ++ +.+. ...|+++++ |+|+ +|.++|++++++++.+.+..... . ...
T Consensus 241 v~~----g~-~~g~~~~~~~~~~~~di~t~s--K~~~-----~G~~~G~~~~~~~~~~~~~~~~~----------~-~~~ 297 (427)
T 3fq8_A 241 VIT----GF-RIAYGGVQEKFGVTPDLTTLG--KIIG-----GGLPVGAYGGKREIMQLVAPAGP----------M-YQA 297 (427)
T ss_dssp TTT----BT-TTBTTHHHHHTTCCCSEEEEC--GGGG-----TTSSCEEEEECHHHHTTBTTTSS----------B-CCC
T ss_pred ccc----cc-ccCcchhhHhcCCCCChhhhh--hhhh-----CCcceEEEEEcHHHHHhhccCCC----------c-ccc
Confidence 763 33 3321 236887764 9985 45779999999887766532100 0 000
Q ss_pred CCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeeEEEeccccc-
Q 002263 728 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLK- 801 (946)
Q Consensus 728 ~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~~~- 801 (946)
++.+ ++...++++.+.+..+..+++. ++..++.++++++|++. +.+ ...+ .+.. +.+++....
T Consensus 298 ~t~~----~~~~~~aa~~aal~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~ 366 (427)
T 3fq8_A 298 GTLS----GNPLAMTAGIKTLELLRQPGTY---EYLDQITKRLSDGLLAIAQETGHAACGGQ-VSGM---FGFFFTEGPV 366 (427)
T ss_dssp CTTT----TCHHHHHHHHHHHHHHTSTTHH---HHHHHHHHHHHHHHHHHHHHTTCCCEEEE-ETTE---EEEESSSCCC
T ss_pred CCCC----cCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhCCCCeEEEE-eeeE---EEEEEecCcc
Confidence 1111 2344455566666666555544 34446677777777653 222 1111 1212 334443100
Q ss_pred -------ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 802 -------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 802 -------~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
...+....++.++|.++|+.+..... . |+.+....|++|+++++++|++++++
T Consensus 367 ~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~---~--r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 367 HNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF---E--AGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp CSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---S--CEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHHCCcEEecCCC---C--CEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 00001146799999999998764332 2 55567778999999999999988764
No 301
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.65 E-value=1.8e-15 Score=182.69 Aligned_cols=273 Identities=12% Similarity=0.107 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHhCCCCcceEEc-ccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-
Q 002263 99 ESLLNFQTMIADLTGLPMSNASLL-DEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 176 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~~~~sl~-~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~- 176 (946)
..+.++|+.+|+++|++. +.++ +|+|++..++++++. . +||+||+++.+|.|+...++. .|.+++++++
T Consensus 195 g~i~eaE~~lA~~fGa~~--a~~v~nGts~An~~ai~al~-~--pGD~VLv~r~~H~S~~~~l~l----sGa~pv~v~~~ 265 (715)
T 3n75_A 195 GPHKEAEQYIARVFNADR--SYMVTNGTSTANKIVGMYSA-P--AGSTILIDRNCHKSLTHLMMM----SDVTPIYFRPT 265 (715)
T ss_dssp THHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHHC-C--TTCEEEEESSCCHHHHHHHHH----SCCEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCC--ceEECcHHHHHHHHHHHHhC-C--CCCEEEECCCccHHHHHHHHH----cCCEEEEEecc
Confidence 457899999999999976 4444 444677777777663 3 899999999999999998642 5778877653
Q ss_pred -----------------ccccc-cC--CCEe---EEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccC-----
Q 002263 177 -----------------KDIDY-KS--GDVC---GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI----- 228 (946)
Q Consensus 177 -----------------~~l~~-i~--~~t~---~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~----- 228 (946)
++|++ +. ++++ +|++++||++|.+.|+++|+++|++++ ++|+ ..++.+.
T Consensus 266 ~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livD-EAH~~~~~f~~~ 342 (715)
T 3n75_A 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFD-SAWVPYTNFSPI 342 (715)
T ss_dssp BCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEE-CTTCTTGGGSGG
T ss_pred ccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEc-cccccccccCCc
Confidence 33444 42 4455 899999999999999999999998764 5673 2333221
Q ss_pred CC--CCCCcc--ceEE---Eecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccc
Q 002263 229 LK--PPGELG--ADIV---VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 300 (946)
Q Consensus 229 l~--~~~~~G--aDi~---v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~ir 300 (946)
.. .+...| +|++ ++|. |+|++|. ++|+++++++..+.. . ++.+. .
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~glt-----qgs~i~v~~~i~~~~--------~----~~~~~----------~ 395 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFS-----QASMIHVKGDVNEET--------F----NEAYM----------M 395 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSSCCT-----TCEEEEEESCCCHHH--------H----HHHHH----------H
T ss_pred cccccccccCcCCCEEEEEEecccccccCCC-----CeeEEEeCchhhHHH--------H----HHHHH----------h
Confidence 11 122333 7876 8887 7775432 468998875421100 0 00000 0
Q ss_pred ccccCCCccchHHHHHHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhcCCC------EEEcCCC------------
Q 002263 301 RDKATSNICTAQALLANMAAMYAVYHGP-EGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGLP------------ 361 (946)
Q Consensus 301 re~aTsni~t~~~l~a~~aa~y~~~~g~-~Gl~~i~~~~~~~a~~l~~~L~~~g~------~~~~~~~------------ 361 (946)
....++|. ..+.++.++. .++.. +| +++.++..+++++++++|+++++ +++++..
T Consensus 396 ~~STSpsy---~~~AsldaA~--~~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (715)
T 3n75_A 396 HTTTSPHY---GIVASTETAA--AMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS 469 (715)
T ss_dssp TSCSSCCH---HHHHHHHHHH--HHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCT
T ss_pred hcCCCchH---HHHHHHHHHH--HHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCc
Confidence 11112222 2222333332 44443 34 45778999999999999987632 3444210
Q ss_pred ---------------CcC--eEEEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHH
Q 002263 362 ---------------FFD--TVKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKL 411 (946)
Q Consensus 362 ---------------~~~--~~~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~l 411 (946)
.+| .++|.++ + +.++.+.|+++||.++..+...|.+.++..+|++++++|
T Consensus 470 ~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L 549 (715)
T 3n75_A 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSL 549 (715)
T ss_dssp TCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHH
T ss_pred ccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHH
Confidence 023 2556543 3 578999999999999998889999999999999999999
Q ss_pred HHHHh
Q 002263 412 FIVFA 416 (946)
Q Consensus 412 l~~l~ 416 (946)
+++|.
T Consensus 550 ~~aL~ 554 (715)
T 3n75_A 550 LRALT 554 (715)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99996
No 302
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.65 E-value=4.3e-15 Score=170.21 Aligned_cols=282 Identities=17% Similarity=0.163 Sum_probs=176.0
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEcC
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 597 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~~ 597 (946)
..++++.+++++|.+. .+..++|+++.. ++++ +. .++++|+++...|+.+... +...|++++.++.
T Consensus 69 ~~~l~~~la~~~g~~~-~i~~~sG~~ai~---~~~~-l~-----~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 138 (403)
T 3cog_A 69 RNCLEKAVAALDGAKY-CLAFASGLAATV---TITH-LL-----KAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC 138 (403)
T ss_dssp HHHHHHHHHHHHTCSE-EEEESCHHHHHH---HHHT-TS-----CTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred HHHHHHHHHHHhCCCc-EEEECCHHHHHH---HHHH-Hh-----CCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC
Confidence 5678899999999873 455667765443 3333 21 2568899998877654332 3568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcC-CEEEEecccccccccccCCCccCCCEE
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG-GQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g-~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
+ |+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++| +++++|+++... .+..|.++|+|++
T Consensus 139 ~-----d~~~l~~~i~---~~t~~v~~~~p~nptG~~~-~l~~i~~la~~~g~~~livD~~~~~~--~~~~~~~~~~div 207 (403)
T 3cog_A 139 S-----KIKLLEAAIT---PETKLVWIETPTNPTQKVI-DIEGCAHIVHKHGDIILVVDNTFMSP--YFQRPLALGADIS 207 (403)
T ss_dssp T-----SHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHTSSSCCEEEEECTTTCT--TTCCTTTTTCSEE
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeee-CHHHHHHHHHHcCCCEEEEECCCccc--ccCCccccCCeEE
Confidence 5 8999999996 78999999999 5789998 7999999999999 999999986432 2335666899999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+.++||+|+.| ||-.+|+++++ +.+.+.+.....+ .+ .+.+ .. .+|+.+..+ +
T Consensus 208 ~~S~sK~~~g~---~~~~~G~v~~~~~~l~~~l~~~~~~-------------~g-~~~~----~~---~~~~~~~~l--~ 261 (403)
T 3cog_A 208 MYSATKYMNGH---SDVVMGLVSVNCESLHNRLRFLQNS-------------LG-AVPS----PI---DCYLCNRGL--K 261 (403)
T ss_dssp EEETTTTTTCS---SCCCCEEEEECCHHHHHHHHHHHHH-------------HC-CCCC----HH---HHHHHHHHH--T
T ss_pred EEcChhhccCC---CCCeEEEEEECcHHHHHHHHHHHHh-------------cC-CCCC----HH---HHHHHHhhh--h
Confidence 99999998522 22225899885 4554433110000 00 0111 11 123333322 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC---CeeeccCC---C---------ceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 755 GLTEASKIAILNANYMAKRLEKHY---PILFRGVN---G---------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~---~---------~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
.+....++...++..+.+.|++.. .+.+++-. + .....+.|.++ + ...++.+.|.+.|
T Consensus 262 ~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~------~-~~~~~~~~l~~~~ 334 (403)
T 3cog_A 262 TLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIK------G-TLQHAEIFLKNLK 334 (403)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEES------S-CHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEec------C-CHHHHHHHHHhCC
Confidence 233344555566777777775431 11121100 0 01222445543 1 2356667777778
Q ss_pred cccCCC------------------CCC--------C-CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 820 FHGPTM------------------SWP--------V-PGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 820 i~~~~~------------------~~p--------~-~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
+..... ..| + ++.+|+++...+++++|++|.++|++++
T Consensus 335 i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 335 LFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH 399 (403)
T ss_dssp SSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred cceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 742110 001 1 4789999998888888888888876553
No 303
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.65 E-value=2e-14 Score=165.38 Aligned_cols=287 Identities=17% Similarity=0.132 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHhhCCC-c-ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCHHHHHHcC--------
Q 002263 521 MFNNLGEWLCTITGFD-S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCG-------- 589 (946)
Q Consensus 521 ~~~el~~~la~l~G~~-~-~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~~~a~~~G-------- 589 (946)
...++.+.+++++|.+ . ..+..++|++++..++.+++.+ .+++||+++ +.|+....++.+.|
T Consensus 87 ~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~-------~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~ 159 (419)
T 2eo5_A 87 PQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNT-------GRKYIIAFLGGFHGRTFGSISLTASKAVQRSI 159 (419)
T ss_dssp HHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTT-------SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCS
T ss_pred HHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHh-------hCCcEEEECCCcCCCCHhhHhhcCCccccccc
Confidence 3457888999999976 3 3456677777765555444321 156788765 67888877665433
Q ss_pred -----CEEEEEcCCCCCC----------------CCHHHHH-HHHHhcC--CCeEEEEEeCC-Cccccccc---CHHHHH
Q 002263 590 -----MKIVSVGTDAKGN----------------INIEELR-KAAEANR--DNLSTLMVTYP-STHGVYEE---GIDEIC 641 (946)
Q Consensus 590 -----~~vv~v~~~~~g~----------------~D~e~L~-~~i~~~~--~~t~~vvvt~P-n~~G~~~~---~i~~I~ 641 (946)
.+++.+|.+.+.+ +|+++|+ ++++++. +++++|+++.. |++|.+.+ .+++|+
T Consensus 160 ~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~ 239 (419)
T 2eo5_A 160 VGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQ 239 (419)
T ss_dssp SCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHH
T ss_pred cCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHH
Confidence 2578888754422 4789999 9997432 36666665433 35786541 299999
Q ss_pred HHHHHcCCEEEEecccc-ccccccc-CCC--ccCCCEEEeCCCcccccCCCCCC-CcceeEEEecccCCCCCCCccccCC
Q 002263 642 KIIHDNGGQVYMDGANM-NAQVGLT-SPG--YIGADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTG 716 (946)
Q Consensus 642 ~ia~~~g~ll~vD~a~~-~a~~gl~-~pg--~~GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lp~~~v~~~~ 716 (946)
++|++||+++++|+++. .+..+.. ... ....|++++ .|+|+ +| .++|++++++++. .+.+. .
T Consensus 240 ~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~--sK~~~-----~G~~riG~~~~~~~~~-~~~~~-~---- 306 (419)
T 2eo5_A 240 KLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITL--AKALG-----GGIMPIGATIFRKDLD-FKPGM-H---- 306 (419)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGG-----TTTSCCEEEEEEGGGC-CC---------
T ss_pred HHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEe--ccccc-----CCccceEEEEEchHhh-cCCcc-c----
Confidence 99999999999999864 1111110 001 124688765 48874 46 7899999998877 55211 0
Q ss_pred CCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEe
Q 002263 717 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVD 796 (946)
Q Consensus 717 d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~ 796 (946)
. +..+. +....+++.+.+..+. + ..++...+.++|.++|++.+.. .++ .+.+ +.++
T Consensus 307 --------~--~t~~~----n~~~~~aa~aal~~~~-~----~~~~~~~~~~~l~~~L~~~~~~-~~~-~g~~---~~i~ 362 (419)
T 2eo5_A 307 --------S--NTFGG----NALACAIGSKVIDIVK-D----LLPHVNEIGKIFAEELQGLADD-VRG-IGLA---WGLE 362 (419)
T ss_dssp ------------CCCC----CHHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHTTSSSE-EEE-ETTE---EEEE
T ss_pred --------C--CCCCC----CHHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHhhhh-eEe-eeEE---EEEE
Confidence 0 11121 2223333444444332 2 3455567788999999875211 122 1322 3456
Q ss_pred cccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 797 LRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 797 ~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+.+ .+.... +.++|.++|+.+.... .+++||+++...|++|+++++++|++++++
T Consensus 363 ~~~----~~~~~~-~~~~l~~~Gv~v~~~~---~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 363 YNE----KKVRDR-IIGESFKRGLLLLPAG---RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp CSC----HHHHHH-HHHHHHHTTEECEEET---TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred Eec----CccHHH-HHHHHHHCCCEEecCC---CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 521 001245 8999999999875332 478999999899999999999999988765
No 304
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.65 E-value=2.4e-15 Score=172.84 Aligned_cols=211 Identities=18% Similarity=0.159 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH----HHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a----~~~G~~vv~v~ 596 (946)
...++++++++++|.+.+ +..++|+.+..++++++. +++++|+++...|+.....+ ...|++++.++
T Consensus 82 ~~~~l~~~la~~~g~~~~-~~~~sG~~Ai~~al~~l~--------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 152 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAPAA-FATASGMAAVFTSLGALL--------GAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVD 152 (414)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHHHHHHTTC--------CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeC
Confidence 466889999999998754 556777766543333221 25688999888766555444 34899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
.+ |+++|+++++ ++|++|++++| |.+|.+. |+++|+++|+++|+++++|+++.. +.+..|..+|+|++
T Consensus 153 ~~-----d~~~l~~ai~---~~t~~v~le~p~NptG~~~-~l~~i~~la~~~g~~livDe~~~~--~~~~~~~~~g~div 221 (414)
T 3ndn_A 153 GD-----DLSQWERALS---VPTQAVFFETPSNPMQSLV-DIAAVTELAHAAGAKVVLDNVFAT--PLLQQGFPLGVDVV 221 (414)
T ss_dssp TT-----CHHHHHHHTS---SCCSEEEEESSCTTTCCCC-CHHHHHHHHHHTTCEEEEECTTTH--HHHCCCGGGTCSEE
T ss_pred CC-----CHHHHHHhcC---CCCeEEEEECCCCCCCccc-cHHHHHHHHHHcCCEEEEECCCcc--cccCCchhcCCCeE
Confidence 74 8999999996 78999999999 5789997 899999999999999999998652 22346668899999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCC-CCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 754 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~-~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~e 754 (946)
+.+++|+|+.+ |.+.+|+++++++... .+.... ...+. +.+ . ..+|..+ .+.+
T Consensus 222 ~~S~sK~l~~~---G~~~~G~vv~~~~~~~~~l~~~~-------------~~~g~-~~~----~---~~a~~~~--~~l~ 275 (414)
T 3ndn_A 222 VYSGTKHIDGQ---GRVLGGAILGDREYIDGPVQKLM-------------RHTGP-AMS----A---FNAWVLL--KGLE 275 (414)
T ss_dssp EEETTTTTTCS---SCCCCEEEEECHHHHTTHHHHHH-------------HHHCC-CCC----H---HHHHHHH--HHGG
T ss_pred eccCCccccCC---CCceEEEEEECHHHHHHHHHHHH-------------HHcCC-CCC----H---HHHHHHH--HHHH
Confidence 99999998421 2255789988865443 221000 00000 000 1 1233332 3445
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 002263 755 GLTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 755 Gl~~~~~~~~~~a~~l~~~L~~~ 777 (946)
.+....++..+++.++.+.|++.
T Consensus 276 ~l~~r~~~~~~~a~~l~~~L~~~ 298 (414)
T 3ndn_A 276 TLAIRVQHSNASAQRIAEFLNGH 298 (414)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Confidence 56666677788999999999875
No 305
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.65 E-value=2e-14 Score=161.25 Aligned_cols=293 Identities=14% Similarity=0.135 Sum_probs=192.6
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 139 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~ 139 (946)
+.|..+...|+.+.+.+.+...-+..|. . .+ ..++++.+|+++|.++.++.+++|+|.++++++.++
T Consensus 32 ~~~~~~~~~~~~v~~a~~~~~~~~~~y~-~-----~~----~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~--- 98 (361)
T 3ftb_A 32 SSNINPLGIPKSFLNNIDEGIKNLGVYP-D-----VN----YRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF--- 98 (361)
T ss_dssp TCCCCTTCSCHHHHTTHHHHHHGGGSCC-C-----TT----CHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC---
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCC-C-----cc----HHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc---
Confidence 3444455567776544443222123331 1 11 246788999999998888999999997666544322
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------ccccc-cCCCEeEEEEEcC-CCceeecc---hHHH
Q 002263 140 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDF 206 (946)
Q Consensus 140 ~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i 206 (946)
|+|+++...|+++...++. .|++++.++. +++++ +++ +++|++.+| |.+|.+.+ +++|
T Consensus 99 ----d~vi~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i 169 (361)
T 3ftb_A 99 ----EKILIIVPSYAEYEINAKK----HGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHV 169 (361)
T ss_dssp ----SEEEEEESCCTHHHHHHHH----TTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHH
T ss_pred ----CcEEEecCChHHHHHHHHH----cCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 8999999999998887653 5888888765 34555 666 999999998 67998874 7778
Q ss_pred HHHHHhCCcEEEEEecCccccCC-------CCCCCccceEEEecc-ccccccCCCCCCceEEEE-EchhhhhcCCCceEe
Q 002263 207 IKNAHANGVKVVMATDLLALTIL-------KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA-TSQEYKRMMPGRIVG 277 (946)
Q Consensus 207 ~~~a~~~gal~~v~a~~~al~~l-------~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~-~~~~~~~~lp~~~~G 277 (946)
+++|+++|+++++|. ..+.... ...+..+.+++++|. |.|+.| |-.+|++. .++++.+.+...
T Consensus 170 ~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~g~~~~~~~~~~~~~~~~--- 241 (361)
T 3ftb_A 170 LKLAEEKKKTIIIDE-AFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMP----GIRFGYGITNNKEIAAKIKAK--- 241 (361)
T ss_dssp HHHHHHHTCEEEEEC-SSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCG----GGCCEEEEESCHHHHHHHHTT---
T ss_pred HHHhhhcCCEEEEEC-cchhhcCCcccchhHhcccCCCEEEEeeChhhcCCC----CcceeEEEeCCHHHHHHHHhh---
Confidence 888889999999953 2221111 112234556778786 877532 33468877 666666554110
Q ss_pred EeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEE-
Q 002263 278 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE- 356 (946)
Q Consensus 278 ~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~- 356 (946)
+...+.|. ....+..+ .+...+.++++.++..++.+++++.|+++++++
T Consensus 242 -----------------------~~~~~~~~---~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 291 (361)
T 3ftb_A 242 -----------------------QNPWNINC---FAEMAAIN----CLKDTNYIEESLLWIKKERKRFIEELNKIGFIKR 291 (361)
T ss_dssp -----------------------SCTTCSCH---HHHHHHHH----TSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEE
T ss_pred -----------------------CCCCCCCH---HHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 00011121 11111111 222356788899999999999999999984487
Q ss_pred EcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 357 VQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 357 ~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.... ..-+.+.+++ ..++.+.|.++||.++.- .++.+|+|++ +.+|+++++++|.
T Consensus 292 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~ 355 (361)
T 3ftb_A 292 VFSPH-ANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALK 355 (361)
T ss_dssp EECCS-SSEEEEEESSSCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHH
T ss_pred ecCCC-CeEEEEEcCCCCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHH
Confidence 65321 2234455553 789999999999988652 2578999987 8889999988885
No 306
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.65 E-value=9.6e-16 Score=176.09 Aligned_cols=284 Identities=12% Similarity=0.062 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~ 596 (946)
...++++.+++++|.+.. +..++|++++. ++++.+. .++++||++...|+..... +...|++++.++
T Consensus 83 ~~~~le~~lA~l~g~~~~-i~~ssGt~Ai~---~al~~l~-----~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~ 153 (415)
T 2fq6_A 83 THFSLQQAMCELEGGAGC-VLFPCGAAAVA---NSILAFI-----EQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD 153 (415)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHH---HHHHTTC-----CTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHhCCCeE-EEeCCHHHHHH---HHHHHHh-----CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEEC
Confidence 356788999999998754 44467765543 3333321 2568999988866544433 245799999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHH--cCCEEEEecccccccccccCCCccCCC
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPGYIGAD 673 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a~~gl~~pg~~GaD 673 (946)
.+ |+++|+++|+ ++|++|++++| |.+|.+. |+++|+++||+ +|+++++|+++... ....|-++|+|
T Consensus 154 ~~-----d~~~le~ai~---~~tklV~~e~~~NptG~v~-dl~~I~~la~~~~~g~~livD~a~a~~--~~~~p~~~g~D 222 (415)
T 2fq6_A 154 PL-----IGADIVKHLQ---PNTKIVFLESPGSITMEVH-DVPAIVAAVRSVVPDAIIMIDNTWAAG--VLFKALDFGID 222 (415)
T ss_dssp TT-----CGGGGGGGCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHCTTCEEEEECTTTTT--TSSCGGGGTCS
T ss_pred CC-----CHHHHHHhhc---cCCcEEEEECCCCCCCEee-cHHHHHHHHHhhcCCCEEEEECCCccc--ccCCccccCCe
Confidence 63 8899999996 78999999999 4789998 89999999999 99999999986432 22456678999
Q ss_pred EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcH
Q 002263 674 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 753 (946)
Q Consensus 674 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~ 753 (946)
+++.|+||+|+.+ |+.-+|++++++.+.+.+... + ...+. +.+ .. .+|..+. +-
T Consensus 223 iv~~S~sK~lg~~---g~~~~G~l~~~~~~~~~l~~~------------~-~~~G~-~~~----~~---~a~~~~~--~l 276 (415)
T 2fq6_A 223 VSIQAATKYLVGH---SDAMIGTAVCNARCWEQLREN------------A-YLMGQ-MVD----AD---TAYITSR--GL 276 (415)
T ss_dssp EEEEETTTTTTCS---SSCCCEEEEECTTTHHHHHHH------------H-HHTTC-CCC----HH---HHHHHHH--HH
T ss_pred EEEEeCccccCCC---CCceEEEEEeCHHHHHHHHHH------------H-HhcCC-CCC----HH---HHHHHHh--hh
Confidence 9999999998421 112268888887654433110 0 00011 111 11 1232222 22
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCC---C---------ceeeeEEEecccccccCC---CCHHHHHHHH
Q 002263 754 KGLTEASKIAILNANYMAKRLEKHYP---ILFRGVN---G---------TVAHEFIVDLRGLKNTAG---IEPEDVAKRL 815 (946)
Q Consensus 754 eGl~~~~~~~~~~a~~l~~~L~~~~~---v~~~~~~---~---------~~~~e~v~~~~~~~~~~g---~~~~~i~~~L 815 (946)
+.+....++...++.++++.|++... +.+++-. + ...+.+.|.++. + .+...+.+.|
T Consensus 277 ~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g-----~~~~~~~~~~l~~l 351 (415)
T 2fq6_A 277 RTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK-----KLNNEELANYLDNF 351 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS-----CCCHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-----CCCHHHHHHHHHhC
Confidence 34445556667788899999877522 2233210 0 012234454431 1 1223333333
Q ss_pred HHCCcccCCC---------------------CCCC-CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 816 MDYGFHGPTM---------------------SWPV-PGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 816 ~~~Gi~~~~~---------------------~~p~-~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.-.++.+..- ...+ .+.+|+++...+++++|+.|.++|++
T Consensus 352 ~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 352 SLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp SSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 2222222100 0111 37899999999999999999998864
No 307
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.64 E-value=2.6e-14 Score=164.96 Aligned_cols=273 Identities=11% Similarity=0.084 Sum_probs=182.0
Q ss_pred HHHHHHHHHHhC-----CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 102 LNFQTMIADLTG-----LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 102 ~e~q~~la~L~g-----~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
.++++.+|++++ .+..++.+++|||.+++.++.++. . +||+|+++...|+.+...++ ..|++++.++.
T Consensus 99 ~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~-~--~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~ 171 (427)
T 3dyd_A 99 LSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLA-N--PGQNILVPRPGFSLYKTLAE----SMGIEVKLYNL 171 (427)
T ss_dssp HHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHC-C--TTCEEEEEESCCTHHHHHHH----HTTCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhc-C--CCCEEEEcCCCchhHHHHHH----HcCCEEEEEec
Confidence 457789999998 677889999999988887766653 2 78999999999988777654 35777777543
Q ss_pred ----------ccccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCcccc--CC--CCCCCccc
Q 002263 177 ----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALT--IL--KPPGELGA 237 (946)
Q Consensus 177 ----------~~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~--~l--~~~~~~Ga 237 (946)
+++++ +++++++|++.+| |.+|.+.+ +++|+++|+++|+++++|.-...++ .- .+...++.
T Consensus 172 ~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~ 251 (427)
T 3dyd_A 172 LPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLST 251 (427)
T ss_dssp EGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCS
T ss_pred ccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCC
Confidence 34555 7778999999998 77999998 9999999999999999953111111 11 11123444
Q ss_pred e---EEEecc-ccccccCCCCCCceEEEEEchh-------hhhcCCCceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 238 D---IVVGSA-QRFGVPMGYGGPHAAFLATSQE-------YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 238 D---i~v~s~-k~lg~P~~~GGP~~g~l~~~~~-------~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
| ++++|. |.|+.| |-.+|+++++++ +.+.+. ...+...+.
T Consensus 252 ~~~vi~~~S~sK~~~~~----G~riG~~~~~~~~~~~~~~i~~~l~-------------------------~~~~~~~~~ 302 (427)
T 3dyd_A 252 DVPILSCGGLAKRWLVP----GWRLGWILIHDRRDIFGNEIRDGLV-------------------------KLSQRILGP 302 (427)
T ss_dssp SCCEEEEEESTTTSSCG----GGCCEEEEEECSTTSSHHHHHHHHH-------------------------HHHHHHCCS
T ss_pred CCcEEEEeeccccCCCc----CcceEEEEecCcchhhHHHHHHHHH-------------------------HHHhccCCC
Confidence 4 566676 776542 233688888742 222210 000001111
Q ss_pred CccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--CcCeEEEec---C--C-HHHHHH
Q 002263 307 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKC---A--D-AHAIAS 378 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~~~~~i~~---~--~-~~~v~~ 378 (946)
|. .+..++.+ .+.....+.++++.+++.++.+++.+.|+++.++++..+. .+-.+.+.. + . ..++.+
T Consensus 303 ~~---~~~~a~~~--~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~ 377 (427)
T 3dyd_A 303 CT---IVQGALKS--ILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTE 377 (427)
T ss_dssp CH---HHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHH
T ss_pred CH---HHHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHH
Confidence 21 11112222 2344456778889999999999999999998338876322 222223321 1 2 678888
Q ss_pred HHH-HcCCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 379 AAY-KIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 379 ~L~-~~GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+|. ++||.+..- .++.+|++++ +++++|+++++.|..
T Consensus 378 ~l~~~~gV~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~ 419 (427)
T 3dyd_A 378 RLVAEQSVHCLPATCFEYPNFIRVVIT--VPEVMMLEACSRIQE 419 (427)
T ss_dssp HHHHHHCEECEEGGGGTCTTEEEEESC--SCHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEECCcccCCCCeEEEEEC--CCHHHHHHHHHHHHH
Confidence 885 789988642 2578999986 789999999998863
No 308
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.64 E-value=3.8e-14 Score=160.05 Aligned_cols=303 Identities=11% Similarity=0.033 Sum_probs=195.7
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC--CCcceEEcccHHHHHHHHHHHhc
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL--PMSNASLLDEGTAAAEAMAMCNN 137 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~--~~~~~sl~~~~Ta~~ea~~la~~ 137 (946)
+.|..+...|+.+.+.+.+.......|.+. +|..+...++.+.+.+.+|. ++.++.+++|+|.+++.++.++.
T Consensus 29 ~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~ 103 (376)
T 3ezs_A 29 GIGEPQFETPKFIQDALKNHTHSLNIYPKS-----AFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVL 103 (376)
T ss_dssp SSCCCCSCCCHHHHHHHHTTGGGGGSCCCT-----TCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHhhhhcCCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc
Confidence 334444457778877776554444555442 22222223333444445587 67789999999988887766552
Q ss_pred cccCC--CCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-------cccc-cCCCEeEEEEEcC-CCceeecc---h
Q 002263 138 IQKGK--KKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDY-KSGDVCGVLVQYP-GTEGEVLD---Y 203 (946)
Q Consensus 138 ~~~~~--gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-------~l~~-i~~~t~~v~v~~p-n~~G~i~d---i 203 (946)
. + ||+|+++...|+++...++ ..|.+++.++.+ ++++ +.+++++|++++| |.+|.+.+ +
T Consensus 104 -~--~~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l 176 (376)
T 3ezs_A 104 -F--DYQNPTIAYPNPFYQIYEGAAK----FIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEEL 176 (376)
T ss_dssp -T--TCSSCEEEEEESCCTHHHHHHH----HTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHH
T ss_pred -C--CCCCCEEEEecCCcHhHHHHHH----HcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHH
Confidence 2 6 8999999999998887754 358888887763 3444 5567889999888 67999865 7
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCC--CCCC-----------CccceEEEecc-ccccccCCCCCCceEEEEEchhhhh
Q 002263 204 GDFIKNAHANGVKVVMATDLLALTIL--KPPG-----------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKR 269 (946)
Q Consensus 204 ~~i~~~a~~~gal~~v~a~~~al~~l--~~~~-----------~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~ 269 (946)
++|+++|+++|+++++|. ..+.... .... ..+.++++.|. |.||.| |..+|++..++++.+
T Consensus 177 ~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----G~r~G~~~~~~~~~~ 251 (376)
T 3ezs_A 177 ISWVKLALKHDFILINDE-CYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAP----GLRSGFIAGDSRLLE 251 (376)
T ss_dssp HHHHHHHHHHTCEEEEEC-TTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCG----GGCCEEEEECHHHHH
T ss_pred HHHHHHHHHcCcEEEEEc-cchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCc----cceeEEEeeCHHHHH
Confidence 788888999999999953 2222111 1111 46788999987 877532 345789988888776
Q ss_pred cCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 002263 270 MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 349 (946)
Q Consensus 270 ~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L 349 (946)
.+... +...+.+.. .....+..++ +...+.++++.++..++.+++.+.|
T Consensus 252 ~~~~~--------------------------~~~~~~~~~-~~~~~a~~~~----l~~~~~~~~~~~~~~~~~~~l~~~l 300 (376)
T 3ezs_A 252 KYKAF--------------------------RAYLGYTSA-NAIQKASEAA----WLDDRHAEFFRNIYANNLKLARKIF 300 (376)
T ss_dssp HHHHH--------------------------HTTTCCCCC-HHHHHHHHHH----HHCSHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHH--------------------------HhhhcCCCC-hHHHHHHHHH----HhCcHHHHHHHHHHHHHHHHHHHHh
Confidence 55100 000111111 1112222222 2224557888899999999999998
Q ss_pred hcCCCEEEcCCCCcCeEEEecCCHHHHHHHHHH-cCCeeeee--------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 350 KKLGTVEVQGLPFFDTVKVKCADAHAIASAAYK-IEMNLRVV--------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 350 ~~~g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~-~GI~~~~~--------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ | +...... .-+.+.++...++.++|.+ +||.+..- .++.+|+|++. |++|+++++++|..
T Consensus 301 ~--~-~~~~~~~--~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~ 370 (376)
T 3ezs_A 301 K--N-TLIYPYS--FYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY--DTPLLEKPLEIIET 370 (376)
T ss_dssp T--T-CCCCSBS--SEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred c--C-CCCCCcc--eEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 7 5 5411111 1234455457789999987 89988541 35789999873 99999999999863
No 309
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.64 E-value=1.2e-14 Score=168.13 Aligned_cols=297 Identities=13% Similarity=0.067 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc------ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI------QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~------~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
...++++.+|+++|.+ ++.++.+||.+++.++.++.. ..++|++|+++...|+++...++. .|++++.
T Consensus 63 ~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~----~g~~~~~ 136 (437)
T 3bb8_A 63 FNDAFEKKLGEYLGVP--YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQ----NGLIPVF 136 (437)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHH----TTCEEEE
T ss_pred HHHHHHHHHHHHHCCC--cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHH----cCCEEEE
Confidence 4567889999999987 477889999877777766520 012789999999999999988753 5888887
Q ss_pred ecc---------ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCcc--ceEEE
Q 002263 174 SDL---------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELG--ADIVV 241 (946)
Q Consensus 174 ~~~---------~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~G--aDi~v 241 (946)
+++ +++++ ++++|++|++++ +.|...|+++|.++||++|+++++|. ..+++.......+| +|+++
T Consensus 137 v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~--~~g~~~~~~~i~~l~~~~~~~li~D~-a~~~g~~~~~~~~~~~~d~~~ 213 (437)
T 3bb8_A 137 VDVDIPTYNVNASLIEAAVSDKTKAIMIAH--TLGNLFDLAEVRRVADKYNLWLIEDC-CDALGSTYDGKMAGTFGDIGT 213 (437)
T ss_dssp CCEETTTTEECGGGHHHHCCTTEEEEEEEC--GGGCCCCHHHHHHHHHHHTCEEEEEC-TTCTTCEETTEETTSSSSEEE
T ss_pred EeccCccCCcCHHHHHHhcCCCCeEEEEeC--CCCChhcHHHHHHHHHHcCCEEEEEC-ccccCceECCeecccccCEEE
Confidence 754 34555 778899999875 46778999999999999999999953 34544433333456 89988
Q ss_pred ecc-ccccccCCCCCCceEEEEEchhhhh-cCCC-ceEeEe------ecCCCCcceEEecccccccccc-cccCCCcc-c
Q 002263 242 GSA-QRFGVPMGYGGPHAAFLATSQEYKR-MMPG-RIVGVS------IDSSGKPALRVAMQTREQHIRR-DKATSNIC-T 310 (946)
Q Consensus 242 ~s~-k~lg~P~~~GGP~~g~l~~~~~~~~-~lp~-~~~G~s------~d~~g~~~~~l~l~tre~~irr-e~aTsni~-t 310 (946)
.|. |..+.| |+.+|++.++++.+. .++. +-.|.. .+....+.|... ....+.++ +.+|.... .
T Consensus 214 ~s~~~~k~l~----~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~ 287 (437)
T 3bb8_A 214 VSFYPAKHIT----MGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQ--LGSLPFGYDHKYTYSHLGY 287 (437)
T ss_dssp EECSTTSSSC----CSSCEEEEESCHHHHHHHHHHHBTTBCC----------------C--CSCCCTTCCGGGCBCSCCC
T ss_pred EECcCCcCCC----CCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccc--cccccccccccccccccCc
Confidence 873 333222 234588888855432 2110 000100 000000001110 01111222 23332110 0
Q ss_pred h---HHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC------CcC--eEEEecC---CHHHH
Q 002263 311 A---QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFD--TVKVKCA---DAHAI 376 (946)
Q Consensus 311 ~---~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~------~~~--~~~i~~~---~~~~v 376 (946)
+ ..+.+.++ + ..+ +.+++..++..+++++++++|+++.++.++... ... .+.+..+ ...++
T Consensus 288 ~~~~~~~~aa~~-l--~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 362 (437)
T 3bb8_A 288 NLKITDMQAACG-L--AQL--ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDL 362 (437)
T ss_dssp BCCCBHHHHHHH-H--HHH--HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHH
T ss_pred ccCCCHHHHHHH-H--HHH--HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHH
Confidence 0 12211111 1 111 233455556688899999999988226655311 111 2334433 27899
Q ss_pred HHHHHHcCCeeeeec----------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 377 ASAAYKIEMNLRVVD----------------------------SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 377 ~~~L~~~GI~~~~~~----------------------------~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.+.|.++||.++... .+.||++++..+|++|+++++++|.
T Consensus 363 ~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~ 430 (437)
T 3bb8_A 363 VKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFE 430 (437)
T ss_dssp HHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHH
Confidence 999999999875321 0249999999999999999999996
No 310
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.64 E-value=1.6e-14 Score=165.05 Aligned_cols=279 Identities=13% Similarity=0.063 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 176 (946)
...++++.+++++|.+ ++.++.+||.+++.++.+++.. +||+|+++...|+++...++ ..|++++.++.
T Consensus 64 ~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~--~gd~vl~~~~~~~~~~~~~~----~~g~~~~~~~~~~~ 135 (399)
T 2oga_A 64 ELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIG--PGDEVIVPSHTYIASWLAVS----ATGATPVPVEPHED 135 (399)
T ss_dssp HHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCTHHHHHHH----HTTCEEEEECBCSS
T ss_pred hHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCC--CcCEEEECCCccHHHHHHHH----HCCCEEEEEecCCC
Confidence 3457788999999987 4778888998887777665333 78999999999999887764 35888888764
Q ss_pred ------ccccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCcc--ceEEEecc---
Q 002263 177 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELG--ADIVVGSA--- 244 (946)
Q Consensus 177 ------~~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~G--aDi~v~s~--- 244 (946)
+++++ +++++++|++++ .+|.+.|+++|.++|+++|+++++|. ..+.+...+...++ .|+++.|.
T Consensus 136 ~~~~d~~~l~~~i~~~~~~v~~~n--~tG~~~~l~~i~~l~~~~~~~li~De-a~~~g~~~~~~~~~~~~di~~~S~~~s 212 (399)
T 2oga_A 136 HPTLDPLLVEKAITPRTRALLPVH--LYGHPADMDALRELADRHGLHIVEDA-AQAHGARYRGRRIGAGSSVAAFSFYPG 212 (399)
T ss_dssp SSSBCHHHHHHHCCTTEEEECCBC--GGGCCCCHHHHHHHHHHHTCEECEEC-TTCTTCEETTEETTCTTCEEEEECCTT
T ss_pred CCCcCHHHHHHhcCCCCeEEEEeC--CcCCccCHHHHHHHHHHcCCEEEEEC-cccccCccCCeecccccCEEEEeCCCC
Confidence 23455 677899888654 58999999999999999999999953 33444222222344 69999985
Q ss_pred ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCc-ceEEecccccccccccccCCCccchHHHHHHHHHHH
Q 002263 245 QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKP-ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 322 (946)
Q Consensus 245 k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~-~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y 322 (946)
|.|+.| | .+|++.++ +++.+.+..... .+.. .|. + ...++..-.+.....+..+++
T Consensus 213 K~~~~~---G--~~g~~~~~~~~~~~~l~~~~~------~g~~~~~~--------~--~~~g~~~~~~~~~~a~~~~~l- 270 (399)
T 2oga_A 213 KNLGCF---G--DGGAVVTGDPELAERLRMLRN------YGSRQKYS--------H--ETKGTNSRLDEMQAAVLRIRL- 270 (399)
T ss_dssp SSSCCS---S--CCEEEEESCHHHHHHHHHHHB------TTCSSTTC--------C--CSCCCBCCCCHHHHHHHHHHH-
T ss_pred ccCCcC---C--ceEEEEeCCHHHHHHHHHHHh------cCcccccc--------c--cccccCCCcCHHHHHHHHHHH-
Confidence 766422 2 24677775 666554421100 0100 010 0 001111011111111111111
Q ss_pred HHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-C----cCeEEEecCCHHHHHHHHHHcCCeeeeec------
Q 002263 323 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-F----FDTVKVKCADAHAIASAAYKIEMNLRVVD------ 391 (946)
Q Consensus 323 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~----~~~~~i~~~~~~~v~~~L~~~GI~~~~~~------ 391 (946)
+.++++.++..++++++++.|+++.++++...+ . +..+.+...+..++.+.|.++||.++...
T Consensus 271 ------~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~ 344 (399)
T 2oga_A 271 ------AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHL 344 (399)
T ss_dssp ------HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGG
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCCHHHHHHHHHHCCCceecCCCCcccc
Confidence 234567778888999999999988327764221 1 11244433347889999999999876421
Q ss_pred ---------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 392 ---------------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 392 ---------------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+|++++.++|++|+++++++|..
T Consensus 345 ~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 391 (399)
T 2oga_A 345 SPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVRE 391 (399)
T ss_dssp SHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred chhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 14699999999999999999999963
No 311
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.64 E-value=1.3e-13 Score=156.75 Aligned_cols=324 Identities=15% Similarity=0.128 Sum_probs=200.9
Q ss_pred HHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhhhhhHHHHHHHHHHHHHHHh----CC
Q 002263 40 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLT----GL 114 (946)
Q Consensus 40 e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~-~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g~ 114 (946)
++.+...++..++....+ ++.|..+...|+.+.+.+.+.. .....|.+. +|.. ++++.+++++ |.
T Consensus 18 ~~~~~~~~~~~~~~~~i~-l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~g~~----~lr~~ia~~~~~~~g~ 87 (385)
T 1b5p_A 18 AVNAKALELRRQGVDLVA-LTAGEPDFDTPEHVKEAARRALAQGKTKYAPP-----AGIP----ELREALAEKFRRENGL 87 (385)
T ss_dssp HHHHHHHHHHHTTCCCEE-CCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCT-----TCCH----HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCCEEE-ecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC-----CCCH----HHHHHHHHHHHHHhCC
Confidence 455555555544333333 3445445455666554443211 012234332 2222 3344555554 54
Q ss_pred --CCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc----------cccc-
Q 002263 115 --PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY- 181 (946)
Q Consensus 115 --~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~----------~l~~- 181 (946)
++.++.+++|+|.+++.++.++ .. +||+|+++...|+.+...++ ..|.+++.++++ ++++
T Consensus 88 ~~~~~~i~~t~g~~~al~~~~~~l-~~--~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (385)
T 1b5p_A 88 SVTPEETIVTVGGSQALFNLFQAI-LD--PGDEVIVLSPYWVSYPEMVR----FAGGVVVEVETLPEEGFVPDPERVRRA 160 (385)
T ss_dssp CCCGGGEEEESHHHHHHHHHHHHH-CC--TTCEEEEEESCCTHHHHHHH----HTTCEEEEEECCGGGTTCCCHHHHHTT
T ss_pred CCChHHEEEcCChHHHHHHHHHHh-cC--CCCEEEEcCCCchhHHHHHH----HcCCEEEEeecCcccCCCCCHHHHHHh
Confidence 4568989999998888776665 23 89999999999998887764 358888777652 3445
Q ss_pred cCCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCC----CCCCCc--cceEEEecc-cccccc
Q 002263 182 KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL----KPPGEL--GADIVVGSA-QRFGVP 250 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l----~~~~~~--GaDi~v~s~-k~lg~P 250 (946)
+++++++|++.+| |.+|.+. ++++|+++|+++|+++++|. ..+.... .+...+ +.+++++|. |.|+.|
T Consensus 161 l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~ 239 (385)
T 1b5p_A 161 ITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE-IYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239 (385)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCG
T ss_pred cCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEc-cchhcccCCCCCCHHHcCCCCEEEEEechhhcCCc
Confidence 6678999999998 6799985 59999999999999999953 2222111 111222 668888887 776532
Q ss_pred CCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH--hCh
Q 002263 251 MGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY--HGP 328 (946)
Q Consensus 251 ~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~--~g~ 328 (946)
|-.+|++++++++++.+.. . +...|.+..+. ...+..+++ .. .+.
T Consensus 240 ----G~RiG~~~~~~~~~~~l~~-------------------------~-~~~~~~~~~~~-~~~a~~~~l--~~~~~~~ 286 (385)
T 1b5p_A 240 ----GWRIGYACGPKEVIKAMAS-------------------------V-SRQSTTSPDTI-AQWATLEAL--TNQEASR 286 (385)
T ss_dssp ----GGCCEEEECCHHHHHHHHH-------------------------H-HHTTTCSCCHH-HHHHHHHHH--HCHHHHH
T ss_pred ----ccceEEEEeCHHHHHHHHH-------------------------H-HhhccCCCCHH-HHHHHHHHH--hCCCcch
Confidence 1127999998877665410 0 11122232211 111222221 11 024
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC----CHHHHHHHHHHcCCeeeeec----CCeEEEEec
Q 002263 329 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA----DAHAIASAAYKIEMNLRVVD----SNTVTASFD 400 (946)
Q Consensus 329 ~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~----~~~~v~~~L~~~GI~~~~~~----~~~lris~~ 400 (946)
+.++++.++..++.+++.+.|+++| +++.......-+.+.++ +..++.+.|.++||.+..-. ++.+|+|+.
T Consensus 287 ~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~ 365 (385)
T 1b5p_A 287 AFVEMAREAYRRRRDLLLEGLTALG-LKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA 365 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec
Confidence 4577788888889999999998886 77654221111223343 27789999999999886421 478999987
Q ss_pred cCCCHHHHHHHHHHHhC
Q 002263 401 ETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 401 ~~~t~edid~ll~~l~~ 417 (946)
++++++++.++.|..
T Consensus 366 --~~~~~i~~~l~~l~~ 380 (385)
T 1b5p_A 366 --TSEENLRKALERFAR 380 (385)
T ss_dssp --SCHHHHHHHHHHGGG
T ss_pred --CCHHHHHHHHHHHHH
Confidence 789999999998864
No 312
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.64 E-value=2.1e-15 Score=172.16 Aligned_cols=274 Identities=12% Similarity=0.109 Sum_probs=178.9
Q ss_pred HHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEecc-----
Q 002263 103 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSDL----- 176 (946)
Q Consensus 103 e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~-~a~~~gi~v~~~~~----- 176 (946)
++++.+++++|.+.+++ ++.+||.+++.++.++ .. +||+|+++...|+++...+.. ...+.+++++.+++
T Consensus 73 ~~r~~la~~~g~~~~~i-~~~sGt~a~~~a~~~~-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 148 (405)
T 2vi8_A 73 LARERAKQLFGAEHANV-QPHSGAQANMAVYFTV-LE--HGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETH 148 (405)
T ss_dssp HHHHHHHHHHTCSEEEC-CCSSHHHHHHHHHHHH-CC--TTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTC
T ss_pred HHHHHHHHHhCCCceEE-EecCcHHHHHHHHHHh-cC--CCCEEEEecccccchhcccchhhhccceeEEEecccccccC
Confidence 46789999999985433 3456687777766655 23 789999999999877531100 00011235555442
Q ss_pred ----ccccc-cCC-CEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCC---CCCCCc-cceEEEecc-c
Q 002263 177 ----KDIDY-KSG-DVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KPPGEL-GADIVVGSA-Q 245 (946)
Q Consensus 177 ----~~l~~-i~~-~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l---~~~~~~-GaDi~v~s~-k 245 (946)
+++++ +++ ++++|++ .|+..|...|+++|.++|+++|+++++|. ..+.+.. ..+..+ ++|++++|. |
T Consensus 149 ~~d~~~l~~~i~~~~~~~v~~-~~~~~~~~~~l~~i~~l~~~~~~~li~De-a~~~g~~~~~~~~~~~~~~di~~~s~sK 226 (405)
T 2vi8_A 149 VIDYDDVREKARLHRPKLIVA-AAAAYPRIIDFAKFREIADEVGAYLMVDM-AHIAGLVAAGLHPNPVPYAHFVTTTTHK 226 (405)
T ss_dssp SBCHHHHHHHHHHHCCSEEEE-CCSSCCSCCCHHHHHHHHHHHTCEEEEEC-TTTHHHHHTTSSCCSTTTCSEEEEESSS
T ss_pred CcCHHHHHHHHHhcCCeEEEE-eCCCCCccCCHHHHHHHHHHcCCEEEEEc-cccccccccCcCCCccccCCEEEEeccc
Confidence 34555 554 7888877 55556877799999999999999999943 3333321 111111 689999887 7
Q ss_pred cccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH
Q 002263 246 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 325 (946)
Q Consensus 246 ~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~ 325 (946)
+|++| +| |++++++++.+.+... + .+ ...+|+|. ....++.+++ ..
T Consensus 227 ~~~g~-----~g-G~~~~~~~~~~~l~~~--------------------~-~~--~~~~~~~~---~~~aa~~~al--~~ 272 (405)
T 2vi8_A 227 TLRGP-----RG-GMILCQEQFAKQIDKA--------------------I-FP--GIQGGPLM---HVIAAKAVAF--GE 272 (405)
T ss_dssp TTCCC-----SC-EEEEECHHHHHHHHHH--------------------H-TT--TTCSSCCH---HHHHHHHHHH--HH
T ss_pred cCCCC-----CC-eEEEEcHHHHHHHHhh--------------------h-cc--cccCCCCH---HHHHHHHHHH--HH
Confidence 77532 34 8999998776654100 0 00 01123332 2232333333 33
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC----CHHHHHHHHHHcCCeeeee----------
Q 002263 326 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA----DAHAIASAAYKIEMNLRVV---------- 390 (946)
Q Consensus 326 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~----~~~~v~~~L~~~GI~~~~~---------- 390 (946)
+..++++++.++..++.+++.+.|+++| +++..+ .....+.+.++ ...++.+.|.++||.++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~ 351 (405)
T 2vi8_A 273 ALQDDFKAYAKRVVDNAKRLASALQNEG-FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPF 351 (405)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTT
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCC
Confidence 3346888999999999999999999997 888742 22334455543 2778999999999988642
Q ss_pred cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 002263 391 DSNTVTASFDE----TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ~~~~lris~~~----~~t~edid~ll~~l~~ 417 (946)
.++.+|+|++. ..+++|+++++++|..
T Consensus 352 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 382 (405)
T 2vi8_A 352 VTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL 382 (405)
T ss_dssp TCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCceEEeeeeeeecCCCHHHHHHHHHHHHH
Confidence 24679999997 4679999999999963
No 313
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.64 E-value=2.6e-14 Score=164.22 Aligned_cols=309 Identities=12% Similarity=0.102 Sum_probs=193.1
Q ss_pred cCCCCCCCCCcHHHHHHHHh---CCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC--CC-cceEEcccHHHHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL--PM-SNASLLDEGTAAAEAM 132 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~---~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~--~~-~~~sl~~~~Ta~~ea~ 132 (946)
++.|.-+...|+.+.+.+.+ +......|++. +|..+......+.+.+..|. ++ .++.+++|+|.+++.+
T Consensus 33 l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~-----~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~ 107 (422)
T 3fvs_A 33 LGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT-----FGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA 107 (422)
T ss_dssp CCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT-----TCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred eCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC-----CCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence 35555444566666544442 22113445432 12222222233344444454 44 5788999999888877
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------------------ccccc-cCCCEeEEEE
Q 002263 133 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------------------KDIDY-KSGDVCGVLV 191 (946)
Q Consensus 133 ~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------------------~~l~~-i~~~t~~v~v 191 (946)
+.++. . +||+|+++...|+.+...++. .|.+++.+++ +++++ +++++++|++
T Consensus 108 ~~~~~-~--~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~ 180 (422)
T 3fvs_A 108 FQALV-D--EGDEVIIIEPFFDCYEPMTMM----AGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180 (422)
T ss_dssp HHHHC-C--TTCEEEEEESCCTTHHHHHHH----TTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEE
T ss_pred HHHHc-C--CCCEEEEcCCCchhhHHHHHH----cCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEE
Confidence 66552 3 789999999999988777643 5777776654 23445 6778999999
Q ss_pred EcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCC-----CC----CCCccceEEEecc-ccccccCCCCCCc
Q 002263 192 QYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL-----KP----PGELGADIVVGSA-QRFGVPMGYGGPH 257 (946)
Q Consensus 192 ~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l-----~~----~~~~GaDi~v~s~-k~lg~P~~~GGP~ 257 (946)
.+| |.+|.+. ++++|+++|+++|++++++. ..+.... .+ +..++.++++.|. |.|+.| |..
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~----G~r 255 (422)
T 3fvs_A 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDE-VYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSAT----GWK 255 (422)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCG----GGC
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEc-cchhhccCCCCCCChhhcccccCcEEEEecchhccCCc----cce
Confidence 998 6799988 69999999999999999953 2222111 01 1235677888887 888533 345
Q ss_pred eEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH------hChhhH
Q 002263 258 AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY------HGPEGL 331 (946)
Q Consensus 258 ~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~------~g~~Gl 331 (946)
+|++.+++++++.+... +...+.+ ++.....+..+++ .. ...+.+
T Consensus 256 ~G~~~~~~~~~~~~~~~--------------------------~~~~~~~-~~~~~~~a~~~~l--~~~~~~~~~~~~~~ 306 (422)
T 3fvs_A 256 VGWVLGPDHIMKHLRTV--------------------------HQNSVFH-CPTQSQAAVAESF--EREQLLFRQPSSYF 306 (422)
T ss_dssp CEEEECCHHHHHHHHHH--------------------------HHTTTCC-CCHHHHHHHHHHH--HHHHHTTTCTTCHH
T ss_pred EEEEEeCHHHHHHHHHH--------------------------HhhccCC-CCcHHHHHHHHHH--hhccccccchHHHH
Confidence 79999988877654100 0001111 1112222222222 21 235668
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC----------------HHHHHHHHH-HcCCeeeee----
Q 002263 332 KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----------------AHAIASAAY-KIEMNLRVV---- 390 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~----------------~~~v~~~L~-~~GI~~~~~---- 390 (946)
+++.++..++.+++.+.|+++| +++.......-+.+.++. ..++.+.|. ++||.+..-
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~ 385 (422)
T 3fvs_A 307 VQFPQAMQRCRDHMIRSLQSVG-LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFY 385 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhc
Confidence 8899999999999999999997 876532211122333321 336777755 579987541
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 -------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 -------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..+.+|+|++. ++++|+++++.|.
T Consensus 386 ~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~ 416 (422)
T 3fvs_A 386 SVPHQKHFDHYIRFCFVK--DEATLQAMDEKLR 416 (422)
T ss_dssp CHHHHTTSCSEEEEECCC--CHHHHHHHHHHHH
T ss_pred CCcCCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 24789999886 9999999999886
No 314
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.64 E-value=2.9e-14 Score=159.47 Aligned_cols=272 Identities=17% Similarity=0.108 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH--HHHhhcCC-CeEEEEecc
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI--CITRADGF-DIKVVVSDL 176 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~--~~~~a~~~-gi~v~~~~~ 176 (946)
...++++.+++++| +..++.++++||.+++.++.++. ++||+|+++...|+++... +... . |.+++.++.
T Consensus 44 ~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~---~~gd~vi~~~~~~~~~~~~~~~~~~---~~g~~~~~v~~ 116 (356)
T 1v72_A 44 LTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMT---PPWGNIYCHPASHINNDECGAPEFF---SNGAKLMTVDG 116 (356)
T ss_dssp HHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSC---CTTEEEEECTTSHHHHSSTTHHHHH---TTSCEEEECCC
T ss_pred HHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhc---CCCCEEEEcCccchhhhhchHHHHH---hCCcEEEEecC
Confidence 45667889999999 44456788999987776665542 2789999999999887655 4322 2 778888765
Q ss_pred c-------cccc--cCC-------CEeEEEEEcCCCcee---ecchHHHHHHHHhCCcEEEEEe-cCc-cccC-CCCCCC
Q 002263 177 K-------DIDY--KSG-------DVCGVLVQYPGTEGE---VLDYGDFIKNAHANGVKVVMAT-DLL-ALTI-LKPPGE 234 (946)
Q Consensus 177 ~-------~l~~--i~~-------~t~~v~v~~pn~~G~---i~di~~i~~~a~~~gal~~v~a-~~~-al~~-l~~~~~ 234 (946)
+ +|++ +.+ ++++|++++|+.+|. ..++++|.++|+++|+++++|. +.. +... -.++..
T Consensus 117 ~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~ 196 (356)
T 1v72_A 117 PAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAE 196 (356)
T ss_dssp GGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTT
T ss_pred CCCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHH
Confidence 3 3433 333 689999999877999 6689999999999999999953 211 0100 012222
Q ss_pred ----ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCcc
Q 002263 235 ----LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 309 (946)
Q Consensus 235 ----~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~ 309 (946)
.++|+++.+. |+ +.|. |.|++++++++.+++.. + +...++ ..
T Consensus 197 ~~~~~~~d~~~~s~sK~-g~~~-----G~g~~~~~~~~~~~~~~--------------~-----------~~~~~~--~~ 243 (356)
T 1v72_A 197 MTWKAGVDALSFGATKN-GVLA-----AEAIVLFNTSLATEMSY--------------R-----------RKRAGH--LS 243 (356)
T ss_dssp TTGGGTCCEEEECCGGG-TCSS-----CEEEEESSGGGHHHHHH--------------H-----------HHHTTC--CC
T ss_pred hhhhhcCCEEEEecccC-CCcC-----ccEEEEECHHHHhhHHH--------------H-----------hhccCc--hh
Confidence 4789998887 55 4442 35799888877665410 0 000111 11
Q ss_pred chHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCCCcCeEEEecCCHHHHHHHHHHcCCeee
Q 002263 310 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLR 388 (946)
Q Consensus 310 t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~~v~~~L~~~GI~~~ 388 (946)
+. ...+..++ +.++....+.++.++..++.+++++.|+++ | +++..+.....+.+..+ .++.++|.++||.++
T Consensus 244 ~~-~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~--~~~~~~l~~~gi~v~ 317 (356)
T 1v72_A 244 SK-MRFLSAQI--DAYLTDDLWLRNARKANAAAQRLAQGLEGLGG-VEVLGGTEANILFCRLD--SAMIDALLKAGFGFY 317 (356)
T ss_dssp SS-THHHHHHH--HHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTT-EEEESCCCSSEEEEEEC--HHHHHHHHHTTCBCB
T ss_pred hh-HHHHHHHH--HHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCC-cEEccCCCccEEEEEcC--HHHHHHHHhcCeEEe
Confidence 10 11122222 244444456677788889999999999987 6 88864333334445554 478899999999886
Q ss_pred e--ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 389 V--VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 ~--~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. ..++.+|++++..+|++|+++++++|+.
T Consensus 318 ~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 348 (356)
T 1v72_A 318 HDRWGPNVVRFVTSFATTAEDVDHLLNQVRL 348 (356)
T ss_dssp CSSSSTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred ccccCCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 3 2257899999999999999999999974
No 315
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.64 E-value=2.7e-15 Score=174.55 Aligned_cols=302 Identities=16% Similarity=0.212 Sum_probs=179.6
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCC-CCCHHHHHHcCCEEEEEcCCC-
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAH-GTNPATAAMCGMKIVSVGTDA- 599 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saH-g~~~~~a~~~G~~vv~v~~~~- 599 (946)
..++++.+++++|.+.+ +.+++|+++...++.++ . . +++ +++...| +++...+...|++++.+++++
T Consensus 77 ~~~l~~~la~~~~~~~~-~~~~~gt~a~~~al~~l---~-~----~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~ 145 (456)
T 2ez2_A 77 FYHLERTVQELFGFKHI-VPTHQGRGAENLLSQLA---I-K----PGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEA 145 (456)
T ss_dssp HHHHHHHHHHHHCCSEE-EEESSHHHHHHHHHHHH---C-C----TTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGG
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCcHHHHHHHHHHh---C-C----CCC--EeccccccchhHHHHHHcCCEEEEeccccc
Confidence 55788999999998754 55667776665444332 1 2 345 5555555 776777889999999998863
Q ss_pred ---------CCCCCHHHHHHHHHhcC-CCeEEEEEeCCC--ccccccc--CHHHHHHHHHHcCCEEEEecccccc---c-
Q 002263 600 ---------KGNINIEELRKAAEANR-DNLSTLMVTYPS--THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA---Q- 661 (946)
Q Consensus 600 ---------~g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn--~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~a---~- 661 (946)
++.+|+++|++++++.. +++++|++++|+ .+|.+.+ ++++|+++|++||+++++|+++..+ +
T Consensus 146 ~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~ 225 (456)
T 2ez2_A 146 HDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFI 225 (456)
T ss_dssp GCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccc
Confidence 26789999999997421 235899999883 5887651 3999999999999999999987532 0
Q ss_pred ----cccc-CCC-------ccCCCEEEeCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 662 ----VGLT-SPG-------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 662 ----~gl~-~pg-------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
..+. .+- ....|++++|+||+++ .|.+|++++ ++++.+.+....... . + .. ...
T Consensus 226 ~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~------~~~gG~~~~~~~~~~~~~~~~~~~~-~--~---~~-~~~ 292 (456)
T 2ez2_A 226 KEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL------VNIGGFLCMNDDEMFSSAKELVVVY-E--G---MP-SYG 292 (456)
T ss_dssp HHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC------CSSCEEEEESCHHHHHHHHHHHHHH-T--C---CT-TTT
T ss_pred cccccccCCcchhhhhhhhcccCCEEEEeCcccCC------CCceeEEEECCHHHHHHHHHHHhhc-c--C---cc-ccc
Confidence 0111 110 1236999888888653 124688887 455543321000000 0 0 00 000
Q ss_pred CcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCC
Q 002263 729 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIE 807 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~ 807 (946)
..+ ...+.+.+.+.+..+. .+..++...+++++.+.|++. +.+. .+.+.. -+.+++..+. .+.+
T Consensus 293 ~~~-----~~~~~a~a~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~g~~~~--~p~~~~--~~~~~~~~~~--~~~~ 357 (456)
T 2ez2_A 293 GLA-----GRDMEAMAIGLREAMQ----YEYIEHRVKQVRYLGDKLKAAGVPIV--EPVGGH--AVFLDARRFC--EHLT 357 (456)
T ss_dssp TCC-----HHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHTTCCBC--SSCCSS--EEEEEHHHHT--TTSC
T ss_pred Ccc-----hhHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHhcCCCccc--cCCCce--EEEEEhHHhc--CCCC
Confidence 111 0111111333333332 233344556778888888874 4432 222211 2344542110 1223
Q ss_pred HHH-----HHHHH-HHCCccc-C--CCC-----------CCCCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 002263 808 PED-----VAKRL-MDYGFHG-P--TMS-----------WPVPGTLMIEPTES-ESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 808 ~~~-----i~~~L-~~~Gi~~-~--~~~-----------~p~~~~lri~~t~~-~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..+ +.++| .++|+.+ + ... ++..+.+|++++.. ++++|+++++++|++++++...
T Consensus 358 ~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~~ 433 (456)
T 2ez2_A 358 QDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKED 433 (456)
T ss_dssp GGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred hhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhhh
Confidence 333 47777 5788863 2 110 12247899999876 7999999999999999876554
No 316
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.64 E-value=9.8e-14 Score=154.44 Aligned_cols=293 Identities=10% Similarity=0.065 Sum_probs=196.8
Q ss_pred ecCCCCCCCCCcHHHHHHHHhCCc--cccccCCChhhhhhhHHHHHHHHHHHHHHHhC---CCCcceEEcccHHHHHHHH
Q 002263 58 FIGMGYYNTHVPPVILRNIMENPA--WYTQYTPYQAEIAQGRLESLLNFQTMIADLTG---LPMSNASLLDEGTAAAEAM 132 (946)
Q Consensus 58 ~~G~g~~~~~~p~~i~~~i~~~~~--~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g---~~~~~~sl~~~~Ta~~ea~ 132 (946)
+++.|.++...|+.+.+.+.+... -...|.. .+ ..++++.+|+++| .++.++.+++|+|.+++.+
T Consensus 23 ~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~----~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~ 92 (335)
T 1uu1_A 23 YLALNENPFPFPEDLVDEVFRRLNSDALRIYYD------SP----DEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVM 92 (335)
T ss_dssp EESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC------SS----CHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHH
T ss_pred ECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC------Cc----hHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHH
Confidence 345666565677777777765431 1122221 11 3467789999999 7888899999999777765
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecccc-----ccccCCCEeEEEEEcC-CCceeecchHHH
Q 002263 133 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-----IDYKSGDVCGVLVQYP-GTEGEVLDYGDF 206 (946)
Q Consensus 133 ~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~~-----l~~i~~~t~~v~v~~p-n~~G~i~di~~i 206 (946)
+.++ ||+|+++ ..|+.+...++. .|.+++.++.++ ++++ +++++|++.+| |.+|.+.|.+++
T Consensus 93 ~~~~------gd~Vl~~-p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l-~~~~~v~l~~p~nptG~~~~~~~l 160 (335)
T 1uu1_A 93 MLMF------DRSVFFP-PTYSCYRIFAKA----VGAKFLEVPLTKDLRIPEVNV-GEGDVVFIPNPNNPTGHVFEREEI 160 (335)
T ss_dssp HHHS------SEEEECS-SSCHHHHHHHHH----HTCEEEECCCCTTSCCCCCCC-CTTEEEEEESSCTTTCCCCCHHHH
T ss_pred HHHh------CCcEEEC-CCcHHHHHHHHH----cCCeEEEeccCCCCCCCHHHc-CCCCEEEEeCCCCCCCCCCCHHHH
Confidence 5543 6899999 999998877643 488888887642 2224 57899999998 679999999999
Q ss_pred HHHHHhCCcEEEEEecCcc-ccC---CCCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeec
Q 002263 207 IKNAHANGVKVVMATDLLA-LTI---LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 281 (946)
Q Consensus 207 ~~~a~~~gal~~v~a~~~a-l~~---l~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d 281 (946)
.++++..| ++++| +..+ +.. +...+.++.+++++|. |.|+.| |..+|++++++++.+.+...
T Consensus 161 ~~l~~~~~-~li~D-e~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----G~r~G~~~~~~~~~~~l~~~------- 227 (335)
T 1uu1_A 161 ERILKTGA-FVALD-EAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLA----AQRVGYVVASEKFIDAYNRV------- 227 (335)
T ss_dssp HHHHHTTC-EEEEE-CTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCG----GGCCEEEEECHHHHHHHHHH-------
T ss_pred HHHHHhCC-EEEEE-CcchhhcchhHHHHhhhCCCEEEEecchhhcCCc----ccCeEEEEeCHHHHHHHHHh-------
Confidence 99999988 77774 2322 211 1112345678999887 877432 23479999988876654100
Q ss_pred CCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC
Q 002263 282 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 361 (946)
Q Consensus 282 ~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~ 361 (946)
+...+.|. ....+..++ +. ..+.++++.++..++.+++.+.|+++| +++....
T Consensus 228 -------------------~~~~~~~~---~~~~~~~~~--l~--~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~ 280 (335)
T 1uu1_A 228 -------------------RLPFNVSY---VSQMFAKVA--LD--HREIFEERTKFIVEERERMKSALREMG-YRITDSR 280 (335)
T ss_dssp -------------------SCTTCSCH---HHHHHHHHH--HH--THHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCC
T ss_pred -------------------cCCCCcCH---HHHHHHHHH--hC--CHHHHHHHHHHHHHHHHHHHHHHHHCC-cEEcCCC
Confidence 00011221 112122222 12 134678888899999999999998876 7654321
Q ss_pred CcCeEEEecCC--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 362 FFDTVKVKCAD--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 362 ~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..-+.+.+++ ..++.+.|.++||.++. .++.+|+|++ +.+|+++++++|+.
T Consensus 281 -~~~~~~~~~~~~~~~~~~~l~~~gi~v~~-~~~~iRis~~---~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 281 -GNFVFVFMEKEEKERLLEHLRTKNVAVRS-FREGVRITIG---KREENDMILRELEV 333 (335)
T ss_dssp -SSEEEEECCTHHHHHHHHHHHHHTEEEEE-ETTEEEEECC---CHHHHHHHHHHHHC
T ss_pred -CeEEEEECCCCCHHHHHHHHHHCCEEEEE-CCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 2235566664 67899999999999876 4678999985 57899999999864
No 317
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.63 E-value=2.1e-14 Score=165.76 Aligned_cols=288 Identities=13% Similarity=0.178 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCC---------
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM--------- 590 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~--------- 590 (946)
...++.++++++++-....++.++|+++++.++.+++.+. ++++|++ ..+.||.........|.
T Consensus 94 ~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 167 (429)
T 4e77_A 94 MEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYT------GRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPN 167 (429)
T ss_dssp HHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCC------------------CC
T ss_pred HHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhh------CCCEEEEEcCccCCCChhhhhhcCCcccccCCCC
Confidence 3557888999988622234667888888777666665542 3455654 56778876543322221
Q ss_pred ----------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC---HHHHHHHHHHcCCEEEEecc
Q 002263 591 ----------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGA 656 (946)
Q Consensus 591 ----------~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~---i~~I~~ia~~~g~ll~vD~a 656 (946)
.+..++. .|+++|+++++++.+++++|+++..+ +.|++.++ +++|.++|++||+++++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv 242 (429)
T 4e77_A 168 SPGVPTDFAKHTLTCTY-----NDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEV 242 (429)
T ss_dssp CTTSCGGGGTTEEEECT-----TCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEET
T ss_pred cCCCCCccCCceeecCC-----CCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 1222222 28999999998766678777765443 46777622 99999999999999999987
Q ss_pred cccccccccCCCc------c--CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 657 NMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 657 ~~~a~~gl~~pg~------~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
+. ++ +.+. + ..|++++ .|+|+ +|.++|++++++++.+.+.... .....+
T Consensus 243 ~~----g~-r~g~~~~~~~~~~~pdi~t~--sK~~~-----~G~~~G~~~~~~~~~~~l~~~~-----------~~~~~~ 299 (429)
T 4e77_A 243 MT----GF-RVALAGAQDYYHVIPDLTCL--GKIIG-----GGMPVGAFGGRREVMNALAPTG-----------PVYQAG 299 (429)
T ss_dssp TT----BT-TTBTTCHHHHTTCCCSEEEE--EGGGG-----TTSCCEEEEECHHHHTTBTTTS-----------SBCC--
T ss_pred cc----Cc-ccCcchHHHhcCCCCCeeee--ccccc-----CCCCeEEEEECHHHHHHhccCC-----------CccccC
Confidence 54 33 3321 2 3588766 49884 4678899999988776553210 000001
Q ss_pred CcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeeEEEecccccc-
Q 002263 729 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLKN- 802 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~~~~- 802 (946)
+.+ ++...++++.+.+..+..+.+. ++...+.++++++|++. +.+ ...+ .+.+ +.+.+.....
T Consensus 300 t~~----~~~~~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~ 368 (429)
T 4e77_A 300 TLS----GNPIAMAAGFACLTEISQVGVY---ETLTELTDSLATGLRHAAKEENIPLVVNH-VGGM---FGLFFTNADTV 368 (429)
T ss_dssp CCC----CCHHHHHHHHHHHHHHTSTTHH---HHHHHHHHHHHHHHHHHHHHTTCCCEEEE-ETTE---EEEECCSSSCC
T ss_pred CCC----CCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhCCCceEEEE-eeeE---EEEEEccCccc
Confidence 111 2344455566666666545443 33445667777777653 222 1111 1222 3444431100
Q ss_pred --------cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 803 --------TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 803 --------~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.......++.++|.++|+.+..... ..++ ++...|++|+++++++|+++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~---~~~~--~~~~~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 369 TCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF---EAGF--MSLAHSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp CSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT---SCEE--CCTTCCHHHHHHHHHHHHHHHT
T ss_pred ccccccccccHHHHHHHHHHHHHCCeEEeecCC---CCEE--EeccCCHHHHHHHHHHHHHHHH
Confidence 0001237899999999998764432 3344 4567899999999999998864
No 318
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.63 E-value=8.2e-14 Score=159.73 Aligned_cols=322 Identities=12% Similarity=0.108 Sum_probs=200.8
Q ss_pred HHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCcc--ccccCCChhhhhhhHHHHHHHHHHHHHHHh----CC
Q 002263 41 MIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAW--YTQYTPYQAEIAQGRLESLLNFQTMIADLT----GL 114 (946)
Q Consensus 41 ~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~~--~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g~ 114 (946)
+.+...++...+..+.+| +.|..+...|+.+.+.+.+...- ...|++. +| ..++++.+|+++ |.
T Consensus 25 ~~~~~~~~~~~g~~~idl-~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g----~~~l~~~ia~~~~~~~g~ 94 (412)
T 2x5d_A 25 TAELKMAARRRGEDIIDL-SMGNPDGPTPPHIVEKLCTVAQREDTHGYSTS-----RG----IPRLRRAISHWYRDRYDV 94 (412)
T ss_dssp HHHHHHHHHHTTCCCEEC-SSCCCCSCCCHHHHHHHHHTC---------CT-----TC----CHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhcCCCEEec-CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-----CC----cHHHHHHHHHHHHHHhCC
Confidence 333344443334334443 33433444666776666543221 1223221 22 234566777777 85
Q ss_pred --CC-cceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc----------cccc
Q 002263 115 --PM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY 181 (946)
Q Consensus 115 --~~-~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~----------~l~~ 181 (946)
++ .++.+++|+|.+++.++.++. . +||+|+++...|+.+...++. .|.+++.++.+ ++++
T Consensus 95 ~~~~~~~v~~t~g~~~a~~~~~~~~~-~--~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~ 167 (412)
T 2x5d_A 95 QIDPESEAIVTIGSKEGLAHLMLATL-D--HGDTILVPNPSYPIHIYGAVI----AGAQVRSVPLVPGIDFFNELERAIR 167 (412)
T ss_dssp CCCTTTSEEEESCHHHHHHHHHHHHC-C--TTCEEEEEESCCHHHHHHHHH----HTCEEEEEECSTTSCHHHHHHHHHH
T ss_pred CCCCCcCEEEcCChHHHHHHHHHHhC-C--CCCEEEEcCCCchhHHHHHHH----cCCEEEEeecCCccCCCCCHHHHHH
Confidence 44 579999999988887776652 2 789999999999998887653 47777776542 3444
Q ss_pred -cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-----CCCC----CccceEEEecc-cc
Q 002263 182 -KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KPPG----ELGADIVVGSA-QR 246 (946)
Q Consensus 182 -i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~----~~GaDi~v~s~-k~ 246 (946)
+++++++|++++| |.+|.+.+ +++|+++|+++|+++++|. ..+.... .+.. ..+.|++++|. |.
T Consensus 168 ~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~ 246 (412)
T 2x5d_A 168 ESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDL-AYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKS 246 (412)
T ss_dssp TEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-C
T ss_pred hcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEec-cccccccCCCCCCChhhccCccCcEEEEecCccc
Confidence 5678899999888 56998864 7899999999999999943 3222211 0111 24789999997 87
Q ss_pred ccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHh
Q 002263 247 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 326 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~ 326 (946)
|+. +|..+|++++++++++.+... + + ....+.|. ....+..++ +. .
T Consensus 247 ~~~----~G~r~G~~~~~~~~~~~l~~~--------------------~--~--~~~~~~~~---~~~~a~~~~--l~-~ 292 (412)
T 2x5d_A 247 YNM----AGWRIGFMVGNPELVSALARI--------------------K--S--YHDYGTFT---PLQVAAIAA--LE-G 292 (412)
T ss_dssp CSC----TTSCCEEEEECHHHHHHHHHH--------------------H--H--HHCCCCCH---HHHHHHHHH--HH-S
T ss_pred cCC----cccceEEEEcCHHHHHHHHHH--------------------H--h--hhccCCCH---HHHHHHHHH--Hh-C
Confidence 743 234579999988877655110 0 0 00011121 111122222 22 3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC------CHHHHHHHHHH-cCCeeeee------cCC
Q 002263 327 GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA------DAHAIASAAYK-IEMNLRVV------DSN 393 (946)
Q Consensus 327 g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~------~~~~v~~~L~~-~GI~~~~~------~~~ 393 (946)
+.+.++++.++..++.+++.+.|+++| +++......--+.+.++ +..++.+.|.+ +||.+... .++
T Consensus 293 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~ 371 (412)
T 2x5d_A 293 DQQCVRDIARQYQQRRDVLVKGLREAG-WMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDD 371 (412)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCC
Confidence 456788899999999999999999886 77653221112334543 36788888865 69988642 257
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 002263 394 TVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 394 ~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+|+|++. ++++++++++.|..
T Consensus 372 ~iRis~~~--~~~~l~~~l~~l~~ 393 (412)
T 2x5d_A 372 HVRFALIE--NRDRLRQAVRGIKA 393 (412)
T ss_dssp EEEEECCS--CHHHHHHHHHHHHH
T ss_pred eEEEEecC--CHHHHHHHHHHHHH
Confidence 89999986 78999999998863
No 319
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=3.6e-14 Score=164.73 Aligned_cols=304 Identities=13% Similarity=0.105 Sum_probs=192.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCc--cccccCCChhhhhhhHHHHHHHHHHHHHHHh----CC--CCcceEEcccHHHHHHH
Q 002263 60 GMGYYNTHVPPVILRNIMENPA--WYTQYTPYQAEIAQGRLESLLNFQTMIADLT----GL--PMSNASLLDEGTAAAEA 131 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~--~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g~--~~~~~sl~~~~Ta~~ea 131 (946)
+.|..+...|+.+.+.+.+... -...|++. +|.. ++++.+++++ |. ++.++.+++|+|.++++
T Consensus 63 ~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~~----~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~ 133 (447)
T 3b46_A 63 GQGFFSYSPPQFAIKEAQKALDIPMVNQYSPT-----RGRP----SLINSLIKLYSPIYNTELKAENVTVTTGANEGILS 133 (447)
T ss_dssp CCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCT-----TCCH----HHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCC-----CCCH----HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 4554444466666655543221 13345432 2322 3344555554 54 44688899999988888
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------------------ccccc-cCCCEeEEE
Q 002263 132 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------------------KDIDY-KSGDVCGVL 190 (946)
Q Consensus 132 ~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~--------------------~~l~~-i~~~t~~v~ 190 (946)
++.++. . +||+|++++..|+.+...++. .|.+++.++. ++|++ +++++++|+
T Consensus 134 ~~~~l~-~--~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~ 206 (447)
T 3b46_A 134 CLMGLL-N--AGDEVIVFEPFFDQYIPNIEL----CGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVI 206 (447)
T ss_dssp HHHHHC-C--TTCEEEEEESCCTTHHHHHHH----TTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEE
T ss_pred HHHHHc-C--CCCEEEEeCCCchhHHHHHHH----cCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEE
Confidence 776652 3 789999999999998877643 4666665543 34555 677899999
Q ss_pred EEcC-CCceee---cchHHHHHHHHhCCcEEEEEecCccccCC----CC-----CCCccceEEEecc-ccccccCCCCCC
Q 002263 191 VQYP-GTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTIL----KP-----PGELGADIVVGSA-QRFGVPMGYGGP 256 (946)
Q Consensus 191 v~~p-n~~G~i---~di~~i~~~a~~~gal~~v~a~~~al~~l----~~-----~~~~GaDi~v~s~-k~lg~P~~~GGP 256 (946)
+.+| |.+|.+ +++++|+++|+++|+++++|. ..+.... .+ ++.++.|++++|. |.|+.| |-
T Consensus 207 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~----G~ 281 (447)
T 3b46_A 207 INTPHNPIGKVFTREELTTLGNICVKHNVVIISDE-VYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAAT----GW 281 (447)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCT----TS
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEec-cchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCc----ch
Confidence 9998 679988 479999999999999999943 3222111 11 1235789999997 877532 22
Q ss_pred ceEEEEE-chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH-HHHHHHHHHHHHhC-hhhHHH
Q 002263 257 HAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA-LLANMAAMYAVYHG-PEGLKT 333 (946)
Q Consensus 257 ~~g~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~-l~a~~aa~y~~~~g-~~Gl~~ 333 (946)
-+|++++ ++++++.+... +...+ .+++.. ..++.+++ .... .+.+++
T Consensus 282 riG~~~~~~~~l~~~l~~~--------------------------~~~~~--~~~~~~~~~a~~~aL--~~~~~~~~~~~ 331 (447)
T 3b46_A 282 RIGWVLSLNAELLSYAAKA--------------------------HTRIC--FASPSPLQEACANSI--NDALKIGYFEK 331 (447)
T ss_dssp CCEEEECSCHHHHHHHHHH--------------------------HHHHT--SSCCHHHHHHHHHHH--HHHHHHTHHHH
T ss_pred hhEEEEeCCHHHHHHHHHH--------------------------Hhhcc--CCCChHHHHHHHHHH--hCCcchHHHHH
Confidence 3799999 87776654100 00001 111122 22222222 2211 344778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecC-----------------C-HHHHHHHHH-HcCCeeeee----
Q 002263 334 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-----------------D-AHAIASAAY-KIEMNLRVV---- 390 (946)
Q Consensus 334 i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~-----------------~-~~~v~~~L~-~~GI~~~~~---- 390 (946)
+.++..++.+++.+.|+++| +++.......-+.++++ . ..++.++|. ++||.+...
T Consensus 332 ~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~ 410 (447)
T 3b46_A 332 MRQEYINKFKIFTSIFDELG-LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFY 410 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHCC-CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhC
Confidence 88889999999999999887 77653211111223332 2 567888887 579987432
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++.+|+|+.. ++++|++.++.|+.
T Consensus 411 ~~~~~~~~~~~iRls~~~--~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 411 IKEHEKAAENLLRFAVCK--DDAYLENAVERLKL 442 (447)
T ss_dssp CGGGGGGGTTEEEEECCS--CHHHHHHHHHHGGG
T ss_pred CCCccCCCCCEEEEEEeC--CHHHHHHHHHHHHH
Confidence 15789999983 89999999998863
No 320
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.63 E-value=1.8e-14 Score=164.94 Aligned_cols=304 Identities=13% Similarity=0.094 Sum_probs=194.5
Q ss_pred CCCCCCCCCcHHHHHHHHhCC--ccccccCCChhhhhhhHHHHHHHHHHHHHHHh----CCC--C-cceEEcccHHHHHH
Q 002263 60 GMGYYNTHVPPVILRNIMENP--AWYTQYTPYQAEIAQGRLESLLNFQTMIADLT----GLP--M-SNASLLDEGTAAAE 130 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~--~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g~~--~-~~~sl~~~~Ta~~e 130 (946)
+.|.++...|+.+.+.+.+.. .....|.+. +|. .++++.+|+++ |.+ + .++.+++|+|.+++
T Consensus 53 ~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g~----~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~ 123 (404)
T 2o1b_A 53 AVGIPDGPTPQGIIDHFQKALTIPENQKYGAF-----HGK----EAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLV 123 (404)
T ss_dssp CCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCT-----TCC----HHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-----CCC----HHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHH
Confidence 445444445666665554322 112234331 222 24556666666 975 2 57889999998888
Q ss_pred HHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc-cCCCEeEEEEEcC-CCcee
Q 002263 131 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDVCGVLVQYP-GTEGE 199 (946)
Q Consensus 131 a~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~-i~~~t~~v~v~~p-n~~G~ 199 (946)
+++.++. . +||+|+++...|+.+...++. .|.+++.++. ++|++ +++++++|++++| |.+|.
T Consensus 124 ~~~~~l~-~--~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 196 (404)
T 2o1b_A 124 AVPTCVI-N--PGDYVLLPDPGYTDYLAGVLL----ADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGS 196 (404)
T ss_dssp HHHHHHC-C--TTCEEEEEESCCSSHHHHHHH----TTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCC
T ss_pred HHHHHhc-C--CCCEEEEcCCCchhHHHHHHH----CCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCc
Confidence 7776652 2 789999999999988877643 4777777654 33444 4567899999888 56999
Q ss_pred ec---chHHHHHHHHhCCcEEEEEecCccccCC--C--CCC----CccceEEEecc-ccccccCCCCCCceEEEEEchhh
Q 002263 200 VL---DYGDFIKNAHANGVKVVMATDLLALTIL--K--PPG----ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEY 267 (946)
Q Consensus 200 i~---di~~i~~~a~~~gal~~v~a~~~al~~l--~--~~~----~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~ 267 (946)
+. ++++|+++|+++|+++++|. ..+.... . +.. ..+.|++++|. |.|+.| |..+|++++++++
T Consensus 197 ~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~----G~r~G~~~~~~~~ 271 (404)
T 2o1b_A 197 TATKEVFDEAIAKFKGTDTKIVHDF-AYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMS----GFRVGFAVGNKDM 271 (404)
T ss_dssp CCCHHHHHHHHHHHTTSSCEEEEEC-TTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCG----GGCCEEEEECHHH
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEc-cchhcccCCCCCChhhcCCCCCCEEEEEecchhccCc----hhheEeEecCHHH
Confidence 87 47899999999999999943 2222111 1 111 23678999997 877532 3346999998887
Q ss_pred hhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHH
Q 002263 268 KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAL 347 (946)
Q Consensus 268 ~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~ 347 (946)
++.+.... . ....+.|. ....+..++ +. .+.+.++++.++..++.+++.+
T Consensus 272 ~~~l~~~~----------~--------------~~~~~~~~---~~~~a~~~~--l~-~~~~~~~~~~~~~~~~~~~l~~ 321 (404)
T 2o1b_A 272 IQALKKYQ----------T--------------HTNAGMFG---ALQDAAIYA--LN-HYDDFLEEQSNVFKTRRDRFEA 321 (404)
T ss_dssp HHHHHHHH----------H--------------HHCCCCCH---HHHHHHHHH--HH-HCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----------h--------------hccCCCCH---HHHHHHHHH--Hh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 76551000 0 00011111 112222222 22 2356788888999999999999
Q ss_pred HHhcCCCEEEcCCCCcCeEEEecC-C--HHHHHHHHH-HcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 348 GLKKLGTVEVQGLPFFDTVKVKCA-D--AHAIASAAY-KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 348 ~L~~~g~~~~~~~~~~~~~~i~~~-~--~~~v~~~L~-~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.|+++| +++......--+.+.++ + +.++.++|. ++||.+... .++.+|++++. ++++++++++.|..
T Consensus 322 ~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~ 398 (404)
T 2o1b_A 322 MLAKAD-LPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTE 398 (404)
T ss_dssp HHHHTT-CCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHG
T ss_pred HHHhcC-CeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 999886 77653211111334554 2 678888887 579988642 15789999986 67899999999874
No 321
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.63 E-value=2.3e-14 Score=161.95 Aligned_cols=271 Identities=14% Similarity=0.104 Sum_probs=182.8
Q ss_pred HHHHHHHHHh-CCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----
Q 002263 103 NFQTMIADLT-GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 176 (946)
Q Consensus 103 e~q~~la~L~-g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~----- 176 (946)
++++.+++++ +.++.++.+++|||.+++.++.++. . +||+|+++...|+++...++ ..|.+++.+++
T Consensus 67 ~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~-~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~ 139 (375)
T 3op7_A 67 AFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI-E--PGDHVISLYPTYQQLYDIPK----SLGAEVDLWQIEEENG 139 (375)
T ss_dssp HHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC-C--TTCEEEEEESSCTHHHHHHH----HTTCEEEEEEEEGGGT
T ss_pred HHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc-C--CCCEEEEeCCCchhHHHHHH----HcCCEEEEEeccccCC
Confidence 5678899987 5677889999999988888776652 3 88999999999999887764 35777776654
Q ss_pred -----ccccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCCC-C---CCccceEEEe
Q 002263 177 -----KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILKP-P---GELGADIVVG 242 (946)
Q Consensus 177 -----~~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~~-~---~~~GaDi~v~ 242 (946)
+++++ +++++++|++++| |.+|.+.| +++|.++|+++|+++++|. ..+.....+ + ..++.+++++
T Consensus 140 ~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~i~~~ 218 (375)
T 3op7_A 140 WLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDE-VYRSFSELDVPSIIEVYDKGIAVN 218 (375)
T ss_dssp TEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEEC-CSCCCSSSCCCCHHHHCTTEEEEE
T ss_pred CCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEc-ccccccccCCCchhhhcCCEEEEe
Confidence 34555 7788999999988 77999999 9999999999999999953 222211111 1 2245678888
Q ss_pred cc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 243 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 243 s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
|. |.|+.| |..+|++.+++++.+.+... +... .++++... ..++..
T Consensus 219 s~sK~~~~~----G~r~G~v~~~~~l~~~~~~~--------------------------~~~~--~~~~~~~~-~~~~~~ 265 (375)
T 3op7_A 219 SLSKTYSLP----GIRIGWVAANHQVTDILRDY--------------------------RDYT--MICAGVFD-DLVAQL 265 (375)
T ss_dssp ESSSSSSCG----GGCCEEEECCHHHHHHHTTT--------------------------GGGT--TSCCCHHH-HHHHHH
T ss_pred EChhhcCCc----ccceEEEEeCHHHHHHHHHH--------------------------Hhhh--ccCCCcHH-HHHHHH
Confidence 87 877533 23468999888887765210 0001 11111111 111111
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--CcCeEEEecCC-HHHHHHHH-HHcCCeeeeec----CC
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCAD-AHAIASAA-YKIEMNLRVVD----SN 393 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~~~~~i~~~~-~~~v~~~L-~~~GI~~~~~~----~~ 393 (946)
.+. ...+.+++..++..++.+++.+.|++.+++.+.... .+.-+.+..+. ..++.++| .++||.+.... ++
T Consensus 266 ~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 344 (375)
T 3op7_A 266 ALA-HYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDG 344 (375)
T ss_dssp HHH-THHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTT
T ss_pred HHh-ccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCC
Confidence 112 223456777788888999999999987448776432 22223333332 77888887 57899886532 58
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 002263 394 TVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 394 ~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+|++++.. .++++++++.|..
T Consensus 345 ~iRi~~~~~--~~~i~~~l~~l~~ 366 (375)
T 3op7_A 345 YVRLGFACE--QETLIKGLEKLSQ 366 (375)
T ss_dssp EEEECCCSC--HHHHHHHHHHHHH
T ss_pred eEEEEecCC--HHHHHHHHHHHHH
Confidence 899997754 4899999998863
No 322
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.63 E-value=2.5e-14 Score=162.49 Aligned_cols=280 Identities=13% Similarity=0.034 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
.+.++++.+++++|.+ +..++.+||.+++.++.+++.. +||+|+++...|+++...++ ..|++++.++++
T Consensus 39 ~~~~l~~~la~~~~~~--~~i~~~sGt~al~~~l~~l~~~--~gd~Vi~~~~~~~~~~~~~~----~~g~~~~~v~~~~~ 110 (388)
T 1b9h_A 39 EVNSFEREFAAHHGAA--HALAVTNGTHALELALQVMGVG--PGTEVIVPAFTFISSSQAAQ----RLGAVTVPVDVDAA 110 (388)
T ss_dssp HHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCTHHHHHHH----HTTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCccHHHHHHHH----HcCCEEEEEecCCC
Confidence 3456788999999986 3556667787777776665333 78999999999999988764 358888887652
Q ss_pred -------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCC---CCCCccceEEEec--c
Q 002263 178 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGS--A 244 (946)
Q Consensus 178 -------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~---~~~~~GaDi~v~s--~ 244 (946)
+|++ +++++++|+.. |.+|.+.|+++|.++|+++|+++++|+ ..+.+... +.+.+| |+.+.| .
T Consensus 111 ~~~~d~~~l~~~i~~~~~~v~~~--n~tG~~~~l~~i~~la~~~~~~li~D~-a~~~g~~~~~~~~~~~~-~i~~~S~s~ 186 (388)
T 1b9h_A 111 TYNLDPEAVAAAVTPRTKVIMPV--HMAGLMADMDALAKISADTGVPLLQDA-AHAHGARWQGKRVGELD-SIATFSFQN 186 (388)
T ss_dssp TCCBCHHHHHHHCCTTEEEECCB--CGGGCCCCHHHHHHHHHHHTCCBCEEC-TTCTTCEETTEEGGGSS-SCEEEECCT
T ss_pred cCCCCHHHHHHhcCcCceEEEEe--CCccCcCCHHHHHHHHHHcCCEEEEec-chhcCCccCCeeccccc-ceEEEEccC
Confidence 3455 67789888832 568999999999999999999999943 34444321 234455 555555 3
Q ss_pred -ccccccCCCCCCceEEEEEchh-h--hhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 245 -QRFGVPMGYGGPHAAFLATSQE-Y--KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 245 -k~lg~P~~~GGP~~g~l~~~~~-~--~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
|.++ |+.+|++.++++ + .+.+.. +.+ .+.... .+ .......||+...+ .+.+ ++
T Consensus 187 ~K~l~------g~~~G~~~~~~~~~~~~~~~~~-~~~-----~~~~~~-----~~-~~~~~~~g~~~~~~--~~~~--a~ 244 (388)
T 1b9h_A 187 GKLMT------AGEGGAVVFPDGETEKYETAFL-RHS-----CGRPRD-----DR-RYFHKIAGSNMRLN--EFSA--SV 244 (388)
T ss_dssp TSSSC------SSSCEEEEECTTCHHHHHHHHH-HTB-----TTCCTT-----CS-SCCCCSCCCBCBCB--HHHH--HH
T ss_pred CCccc------CCCeEEEEECCHHHHHHHHHHH-HHh-----CCCCcc-----Cc-cceeecccccCCcC--HHHH--HH
Confidence 4442 335688888875 4 343310 000 000000 00 00001123322111 1111 11
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-----CC-cCeEEEecCC-----HHHHHHHHHHcCCeeee
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-----PF-FDTVKVKCAD-----AHAIASAAYKIEMNLRV 389 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-----~~-~~~~~i~~~~-----~~~v~~~L~~~GI~~~~ 389 (946)
+ ... .+-+++..++..++++++.+.|+++.++++... +. ...+.+.+++ ..++.+.|.++||.++.
T Consensus 245 ~-~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 321 (388)
T 1b9h_A 245 L-RAQ--LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFA 321 (388)
T ss_dssp H-HHH--HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEE
T ss_pred H-HHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCccc
Confidence 1 111 234566777788899999999999833887642 11 2345666652 56799999999998753
Q ss_pred ec---------------------------------CCeEEEEeccCC-CHHHHHHHHHHHh
Q 002263 390 VD---------------------------------SNTVTASFDETT-TLEDVDKLFIVFA 416 (946)
Q Consensus 390 ~~---------------------------------~~~lris~~~~~-t~edid~ll~~l~ 416 (946)
.. .+.||++++..+ |++|+++++++|.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~ 382 (388)
T 1b9h_A 322 AFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIA 382 (388)
T ss_dssp CCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHH
T ss_pred ccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHH
Confidence 21 125999999999 9999999999986
No 323
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.63 E-value=1.3e-14 Score=166.26 Aligned_cols=274 Identities=11% Similarity=0.050 Sum_probs=174.1
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHh-hcCCCeEEEEec-----
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSD----- 175 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~-a~~~gi~v~~~~----- 175 (946)
..+++.+++++|.+.+++.+ .+||.++++++.++ .. +||+|+++...|++........ ..+.+++++.++
T Consensus 74 ~~~~~~la~~~g~~~~~i~~-~sGt~a~~~~~~~~-~~--~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 149 (417)
T 3n0l_A 74 TLAIERCKKLFNCKFANVQP-NSGSQANQGVYAAL-IN--PGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDG 149 (417)
T ss_dssp HHHHHHHHHHHTCSEEECCC-SSHHHHHHHHHHHH-SC--TTCEEEEECC----------------CCSEEEEECCCTTS
T ss_pred HHHHHHHHHHhCCCCcceEe-ccHHHHHHHHHHHh-cC--CCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCC
Confidence 34677999999998766644 55587777776655 33 8999999999998766532211 123455555543
Q ss_pred ---cccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCC-----CCCCCccceEEEecc-
Q 002263 176 ---LKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA- 244 (946)
Q Consensus 176 ---~~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~~GaDi~v~s~- 244 (946)
+++|++ ++ +++++|++.+|| +|.+.|+++|.++|+++|+++++|. .++.+.. ..+.. ++|++++|.
T Consensus 150 ~~d~~~l~~~i~~~~~~~v~~~~~~-~G~~~~l~~i~~l~~~~~~~li~De-a~~~g~~~~~~~~~~~~-~~di~~~s~s 226 (417)
T 3n0l_A 150 RIDYEKVREIAKKEKPKLIVCGASA-YARVIDFAKFREIADEIGAYLFADI-AHIAGLVVAGEHPSPFP-YAHVVSSTTH 226 (417)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECCSS-CCSCCCHHHHHHHHHHHTCEEEEEC-TTTHHHHHTTSSCCCTT-TCSEEEEESS
T ss_pred CcCHHHHHHHHHhcCCeEEEECCcc-cCccCCHHHHHHHHHHcCCEEEEEC-ccchhhhhcccCCCccc-cceEEEeeCc
Confidence 345555 55 578999988888 4999999999999999999999953 3233221 11111 589999998
Q ss_pred ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHH
Q 002263 245 QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 323 (946)
Q Consensus 245 k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~ 323 (946)
|.|+ ||.+|+++++ +++.+.+... +..++..-.......++.+++
T Consensus 227 K~l~------g~~~G~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~aa~~~a~-- 272 (417)
T 3n0l_A 227 KTLR------GPRGGIIMTNDEELAKKINSA--------------------------IFPGIQGGPLMHVIAAKAVGF-- 272 (417)
T ss_dssp TTTC------SCSCEEEEESCHHHHHHHHHH--------------------------HTTTTCSSCCHHHHHHHHHHH--
T ss_pred cccC------CCCeeEEEECCHHHHHHHhhh--------------------------hCCcccCCcHHHHHHHHHHHH--
Confidence 7663 3445899988 5666554100 001111111112333333332
Q ss_pred HHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC--C--HHHHHHHHHHcCCeeeee--------
Q 002263 324 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV-------- 390 (946)
Q Consensus 324 ~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~~~-------- 390 (946)
.....++++++.++..++++++.+.|++.| +++... .....+.+.+. + ..++.+.|.++||.++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~ 351 (417)
T 3n0l_A 273 KFNLSDEWKVYAKQVRTNAQVLANVLMDRK-FKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRS 351 (417)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSC
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcc
Confidence 344456788999999999999999999987 888642 22233445443 2 778899999999987632
Q ss_pred --cCCeEEEEeccC----CCHHHHHHHHHHHhC
Q 002263 391 --DSNTVTASFDET----TTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 --~~~~lris~~~~----~t~edid~ll~~l~~ 417 (946)
....+|+++... .+++|+++++++|..
T Consensus 352 ~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~ 384 (417)
T 3n0l_A 352 PFITSGLRLGTPALTARGFKEKEMEIVSNYIAD 384 (417)
T ss_dssp TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHH
Confidence 135699997654 468999999999863
No 324
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.63 E-value=1.3e-13 Score=156.76 Aligned_cols=322 Identities=16% Similarity=0.137 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHhcCCcceeecCCCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHh----C
Q 002263 39 SQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLT----G 113 (946)
Q Consensus 39 ~e~~~~~~~l~~~n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~----g 113 (946)
.++.+..+++...++.+.+| +.|..+...|+.+.+.+.+... ....|.+. +| ..++++.+++++ |
T Consensus 17 ~~~~~~~~~~~~~g~~~i~l-~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~g----~~~lr~~ia~~~~~~~g 86 (391)
T 3h14_A 17 MDVMEAARRAEEAGRRIIHM-EVGQPGTGAPRGAVEALAKSLETDALGYTVA-----LG----LPALRQRIARLYGEWYG 86 (391)
T ss_dssp HHHHHHHHHHHHTTCCCEEC-CCSSCSSCSCHHHHHHHHHHHC---------------C----CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCCeEEc-cCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC-----CC----hHHHHHHHHHHHHHHhC
Confidence 45666666666666655543 3454455567766655543111 01223221 12 223455556655 4
Q ss_pred --CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-------cccccCC
Q 002263 114 --LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDYKSG 184 (946)
Q Consensus 114 --~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-------~l~~i~~ 184 (946)
.++.++.+++|+|.+++.++.++. . +||+|+++...|+++...++ ..|++++.++++ +++.+..
T Consensus 87 ~~~~~~~v~~t~g~~~al~~~~~~l~-~--~gd~vl~~~p~~~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (391)
T 3h14_A 87 VDLDPGRVVITPGSSGGFLLAFTALF-D--SGDRVGIGAPGYPSYRQILR----ALGLVPVDLPTAPENRLQPVPADFAG 159 (391)
T ss_dssp CCCCGGGEEEESSHHHHHHHHHHHHC-C--TTCEEEEEESCCHHHHHHHH----HTTCEEEEEECCGGGTTSCCHHHHTT
T ss_pred CCCCHHHEEEecChHHHHHHHHHHhc-C--CCCEEEEcCCCCccHHHHHH----HcCCEEEEeecCcccCCCCCHHHHHh
Confidence 567789999999988887766652 2 78999999999999887764 358888887763 2222222
Q ss_pred -CEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC----CCCCCc-cceEEEecc-ccccccCCC
Q 002263 185 -DVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPPGEL-GADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 185 -~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l----~~~~~~-GaDi~v~s~-k~lg~P~~~ 253 (946)
++++|++++| |.+|.+.+ +++|+++|+++|+++++|. ..+.... ....++ +.+++++|. |.|+.
T Consensus 160 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~---- 234 (391)
T 3h14_A 160 LDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDE-IYHGIEYEAKAVTALELTDECYVINSFSKYFSM---- 234 (391)
T ss_dssp SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCC----
T ss_pred cCCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEC-cchhcccCCCCcChhhcCCCEEEEEechhccCC----
Confidence 7899999998 67999886 8999999999999999953 2221111 111222 456788887 87753
Q ss_pred CCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccc-cccCCCccchHHHHHHHHHHHHHHhChhhHH
Q 002263 254 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR-DKATSNICTAQALLANMAAMYAVYHGPEGLK 332 (946)
Q Consensus 254 GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr-e~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 332 (946)
+|..+|++.+++++.+.+.. .++ ...+.|. ....+..+ .+...+.++
T Consensus 235 ~G~r~G~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~---~~~~a~~~----~l~~~~~~~ 282 (391)
T 3h14_A 235 TGWRVGWMVVPEDQVRVVER-------------------------IAQNMFICAPH---ASQVAALA----ALDCDAELQ 282 (391)
T ss_dssp TTSCCEEEECCGGGHHHHHH-------------------------HHHHTTCCCCH---HHHHHHHH----HTTCHHHHH
T ss_pred ccceeEEEEeCHHHHHHHHH-------------------------HHhhhccCCCH---HHHHHHHH----HhCChHHHH
Confidence 34557999988877655410 000 0111121 11112222 223667888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEcCCCCc-CeEEEecC--C--HHHHHHHHHHc-CCeeeee-------cCCeEEEEe
Q 002263 333 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFF-DTVKVKCA--D--AHAIASAAYKI-EMNLRVV-------DSNTVTASF 399 (946)
Q Consensus 333 ~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-~~~~i~~~--~--~~~v~~~L~~~-GI~~~~~-------~~~~lris~ 399 (946)
++.++..++.+++.+.|+++| +.....+.. ..+.+.++ + +.++.++|.++ ||.++.- .++.+|+|+
T Consensus 283 ~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~ 361 (391)
T 3h14_A 283 ANLDVYKANRKLMLERLPKAG-FTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSY 361 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-CCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEe
Confidence 999999999999999999886 544322211 12333443 2 78899998775 9988642 246899998
Q ss_pred ccCCCHHHHHHHHHHHhC
Q 002263 400 DETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 400 ~~~~t~edid~ll~~l~~ 417 (946)
+. +++|++++++.|..
T Consensus 362 ~~--~~~~i~~~l~~l~~ 377 (391)
T 3h14_A 362 AR--ATADIEEGLDRLEA 377 (391)
T ss_dssp CS--CHHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHH
Confidence 87 78999999998863
No 325
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.63 E-value=4.1e-14 Score=162.29 Aligned_cols=274 Identities=10% Similarity=0.061 Sum_probs=179.8
Q ss_pred HHHHHHHHHhC------------CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 002263 103 NFQTMIADLTG------------LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK 170 (946)
Q Consensus 103 e~q~~la~L~g------------~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~ 170 (946)
++++.+|++++ .++.++.+++|+|.+++.++.++. . +||+|+++...|+++...++ ..|++
T Consensus 79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~-~--~gd~vl~~~p~y~~~~~~~~----~~g~~ 151 (416)
T 1bw0_A 79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAIC-D--AGDYALVPQPGFPHYETVCK----AYGIG 151 (416)
T ss_dssp HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHC-C--TTCEEEEEESCCTHHHHHHH----HTTCE
T ss_pred HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhC-C--CCCEEEEcCCCcHhHHHHHH----HcCcE
Confidence 45677888887 667789999999988887766652 2 78999999999998887654 35777
Q ss_pred EEEecc----------ccccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccc----cC---
Q 002263 171 VVVSDL----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLAL----TI--- 228 (946)
Q Consensus 171 v~~~~~----------~~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al----~~--- 228 (946)
++.++. ++|++ +++++++|++.+| |.+|.+.| +++|+++|+++|+++++|. ..+. +.
T Consensus 152 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~g~~~~ 230 (416)
T 1bw0_A 152 MHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDE-IYAGMVFKGKDPN 230 (416)
T ss_dssp EEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEEC-TTTTCBCCSSCTT
T ss_pred EEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEc-cccccccCCCCCC
Confidence 776553 34555 6778999999998 67999988 9999999999999999943 2222 11
Q ss_pred --CCCCCCc---cceEEEecc-ccccccCCCCCCceEEEEEchh--hhhcCCCceEeEeecCCCCcceEEeccccccccc
Q 002263 229 --LKPPGEL---GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 300 (946)
Q Consensus 229 --l~~~~~~---GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~--~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~ir 300 (946)
..+...+ +-+++++|. |.|+.| |..+|++.++++ +.+.+-.. + + ...
T Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~----Glr~G~~~~~~~~~~~~~~~~~-----------------~--~--~~~ 285 (416)
T 1bw0_A 231 ATFTSVADFETTVPRVILGGTAKNLVVP----GWRLGWLLYVDPHGNGPSFLEG-----------------L--K--RVG 285 (416)
T ss_dssp CCCCCTTSSCCSCCEEEEEESTTTTSCG----GGCCEEEEEECTTCSCHHHHHH-----------------H--H--HHH
T ss_pred CCccCHHHccCCCcEEEEecchhhCCCC----CceEEEEEeeCchhhHHHHHHH-----------------H--H--HHh
Confidence 1111222 234677776 776533 223688888753 33222000 0 0 000
Q ss_pred ccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCCCcCeEEEecC--------
Q 002263 301 RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTVKVKCA-------- 371 (946)
Q Consensus 301 re~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~-------- 371 (946)
....+.|. ....++.++ +.....++++++.++..++.+++.+.|+++ | +++.......-+.+.++
T Consensus 286 ~~~~~~~~---~~~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (416)
T 1bw0_A 286 MLVCGPCT---VVQAALGEA--LLNTPQEHLDQIVAKIEESAMYLYNHIGECIG-LAPTMPRGAMYLMSRIDLEKYRDIK 359 (416)
T ss_dssp HHHTCSCH---HHHHHHHHH--HHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTT-EEECCCCBTTEEEEEECGGGBSSCC
T ss_pred ccccCCCc---HHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcccCCCeeEEEEEeCCHHHcCCCC
Confidence 00112221 112222222 244456788899999999999999999998 6 88764321112223332
Q ss_pred CHHHHHHHHH-HcCCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 372 DAHAIASAAY-KIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 372 ~~~~v~~~L~-~~GI~~~~~----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...++.++|. ++||.+..- .++.+|+|++ ++++++++.++.|..
T Consensus 360 ~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~--~~~e~l~~~l~~l~~ 408 (416)
T 1bw0_A 360 TDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--RPVEVYREAVERIKA 408 (416)
T ss_dssp SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCEEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 2678888884 789988653 2578999995 689999999998863
No 326
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.63 E-value=2.8e-14 Score=161.35 Aligned_cols=304 Identities=12% Similarity=0.067 Sum_probs=195.4
Q ss_pred CCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhC--CCCcceEEcccHHHHHHHHHHHhc
Q 002263 61 MGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNN 137 (946)
Q Consensus 61 ~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g--~~~~~~sl~~~~Ta~~ea~~la~~ 137 (946)
.|..+...|+.+.+.+.+... ....|++... +...++++.+++++| .++.++.+++|+|.++++++.++.
T Consensus 31 ~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~-------~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~ 103 (383)
T 3kax_A 31 IADMDFEVPQPIQTALKKRIEHPIFGYTLPPE-------NIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT 103 (383)
T ss_dssp CSSCSSCCCHHHHHHHHHHHHSCCCCCCCCCT-------THHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC
T ss_pred cccCCCCCCHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC
Confidence 344344566666555543211 1234444322 233455678888888 667789999999988887766652
Q ss_pred cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----------ccccc-cCCCEeEEEEEcC-CCceeecc--
Q 002263 138 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD-- 202 (946)
Q Consensus 138 ~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-----------~~l~~-i~~~t~~v~v~~p-n~~G~i~d-- 202 (946)
. +||+|+++...|+++...++ ..|.+++.++. +++++ +++++++|++.+| |.+|.+.|
T Consensus 104 -~--~gd~vl~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~ 176 (383)
T 3kax_A 104 -K--ENESVLVQPPIYPPFFEMVT----TNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKE 176 (383)
T ss_dssp -C--TTCEEEECSSCCHHHHHHHH----HTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHH
T ss_pred -C--CCCEEEEcCCCcHHHHHHHH----HcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHH
Confidence 3 78999999999999887764 35778877654 34555 6778999999988 67999865
Q ss_pred -hHHHHHHHHhCCcEEEEEecCccccCC-----CCCCC-----ccceEEEecc-ccccccCCCCCCceEEEEE-chhhhh
Q 002263 203 -YGDFIKNAHANGVKVVMATDLLALTIL-----KPPGE-----LGADIVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKR 269 (946)
Q Consensus 203 -i~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~-----~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~-~~~~~~ 269 (946)
+++|.++|+++|++++++. ..+.... .+... .+.++++.|. |.|+.| |..+|++.+ ++++.+
T Consensus 177 ~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~ 251 (383)
T 3kax_A 177 ELTKLGSLCTKYNVIVVADE-IHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIA----GLQASIIIIPNEKLRQ 251 (383)
T ss_dssp HHHHHHHHHHHHTCEEEEEC-TTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCG----GGCCEEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEc-cccccccCCCCceeHhhcCccccCcEEEEEEChhhccCc----chhheEEEeCCHHHHH
Confidence 6777777999999999953 2222111 11112 2455888887 888533 334688887 566655
Q ss_pred cCCCceEeEeecCCCCcceEEecccccccccccc--cCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHH
Q 002263 270 MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK--ATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAL 347 (946)
Q Consensus 270 ~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~--aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~ 347 (946)
.+... ++.. .+.|. ....+..+++ ..+.+.++++.++..++.+++.+
T Consensus 252 ~~~~~-------------------------~~~~~~~~~~~---~~~~a~~~~l---~~~~~~~~~~~~~~~~~~~~l~~ 300 (383)
T 3kax_A 252 AFTSI-------------------------QYRQGFHGLNI---FAYTAMQSAY---TECNDWLNEIRFYIEDNAKFACE 300 (383)
T ss_dssp HHHHH-------------------------HHHTTCCCCCH---HHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-------------------------HhhcccCCCCH---HHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHH
Confidence 44100 0001 12221 1222222221 22455688889999999999999
Q ss_pred HHhc-CCCEEEcCCCCcCeEEEecC----CHHHHHHHHH-HcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 348 GLKK-LGTVEVQGLPFFDTVKVKCA----DAHAIASAAY-KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 348 ~L~~-~g~~~~~~~~~~~~~~i~~~----~~~~v~~~L~-~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l 415 (946)
.|++ ++++++......-.+.+.++ +..++.+.|. ++||.++.- .++.+|++++ +++++++++++.|
T Consensus 301 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l 378 (383)
T 3kax_A 301 YIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRL 378 (383)
T ss_dssp HHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHH
T ss_pred HHHhhCCCceEecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHH
Confidence 9998 53388764321111224433 2788999998 679988642 2478999988 5899999999988
Q ss_pred h
Q 002263 416 A 416 (946)
Q Consensus 416 ~ 416 (946)
.
T Consensus 379 ~ 379 (383)
T 3kax_A 379 R 379 (383)
T ss_dssp H
T ss_pred H
Confidence 6
No 327
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.63 E-value=3.2e-14 Score=164.39 Aligned_cols=273 Identities=13% Similarity=0.103 Sum_probs=176.3
Q ss_pred HHHHHHHHHhC--------CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 103 NFQTMIADLTG--------LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 103 e~q~~la~L~g--------~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
++++.+|++++ .+..++.+++|+|.+.++++.++. . +||+|+++...|+++...++ ...|.+++.+
T Consensus 90 ~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~-~--~gd~vl~~~p~~~~~~~~~~---~~~g~~~~~~ 163 (435)
T 3piu_A 90 AFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLA-D--PGEAVLIPTPYYPGFDRDLK---WRTGVEIVPI 163 (435)
T ss_dssp HHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHC-C--TTCEEEEEESCCTTHHHHTT---TTTCCEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhc-C--CCCeEEECCCccccHHHHHH---HhcCCEEEEe
Confidence 46677888887 567789999999988888776653 2 78999999999998887652 1468888876
Q ss_pred cc----------ccccc-cC------CCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCC--C
Q 002263 175 DL----------KDIDY-KS------GDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK--P 231 (946)
Q Consensus 175 ~~----------~~l~~-i~------~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~--~ 231 (946)
+. ++|++ +. .++++|++++| |.+|.+. ++++|+++|+++|+++++| +..+..... .
T Consensus 164 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D-ea~~~~~~~~~~ 242 (435)
T 3piu_A 164 HCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISD-EIYSGTAFSSPS 242 (435)
T ss_dssp ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE-CTTGGGCCSSSC
T ss_pred eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEe-ccccccccCCCC
Confidence 54 23444 43 38999999998 6799885 4689999999999999994 233322111 1
Q ss_pred -C--C----Cccc---------eEEEecc-ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecc
Q 002263 232 -P--G----ELGA---------DIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQ 293 (946)
Q Consensus 232 -~--~----~~Ga---------Di~v~s~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~ 293 (946)
. . ++|+ +++++|. |.|+.| |..+|+++++ +.+.+.+.
T Consensus 243 ~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~----G~r~G~~~~~~~~~~~~~~--------------------- 297 (435)
T 3piu_A 243 FISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLP----GFRVGAIYSNDDMVVAAAT--------------------- 297 (435)
T ss_dssp CCCHHHHHHC-------CGGGGEEEEEESSSSSCCG----GGCEEEEEESCHHHHHHHH---------------------
T ss_pred CcCHHHhccccccccccCCCCCEEEEEeeecccCCC----ceeEEEEEeCCHHHHHHHH---------------------
Confidence 1 1 1122 2778886 887532 3457898884 44443320
Q ss_pred cccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC-
Q 002263 294 TREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD- 372 (946)
Q Consensus 294 tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~- 372 (946)
++ +...+.| .....++.+.+-...+..+.+++..++..++.+++++.|++.| +++.......-+.+.++.
T Consensus 298 ---~~--~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~l~~~ 368 (435)
T 3piu_A 298 ---KM--SSFGLVS---SQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSG-ISCLNGNAGLFCWVDMRHL 368 (435)
T ss_dssp ---HH--GGGSCCC---HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEECCCCSSSEEEEECGGG
T ss_pred ---HH--hhcCCCC---HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCeeEEEEEEcccc
Confidence 00 0001111 1111122221100001123557778888899999999999987 887643221223344331
Q ss_pred --------HHHHHHHHHHc-CCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 373 --------AHAIASAAYKI-EMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 --------~~~v~~~L~~~-GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..++.++|.++ ||.+..- .++.+|+++... ++++++++++.|..
T Consensus 369 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~ 427 (435)
T 3piu_A 369 LRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKA 427 (435)
T ss_dssp SSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHH
T ss_pred cccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHH
Confidence 45788888876 9988642 357899999766 99999999999863
No 328
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.63 E-value=3.8e-14 Score=162.10 Aligned_cols=306 Identities=11% Similarity=0.065 Sum_probs=193.0
Q ss_pred cCCCCCCCCCcHHHHHHHHhCC--ccccccCCChhhhhhhHHHHHHHHHHHHHHHhC------CCC-cceEEcccHHHHH
Q 002263 59 IGMGYYNTHVPPVILRNIMENP--AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG------LPM-SNASLLDEGTAAA 129 (946)
Q Consensus 59 ~G~g~~~~~~p~~i~~~i~~~~--~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g------~~~-~~~sl~~~~Ta~~ 129 (946)
++.|.-+...|+.+.+.+.+.. ..+..|++.. |. .++++.+|++++ .++ .++.+++|+|.++
T Consensus 28 l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~-----g~----~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~ 98 (410)
T 3e2y_A 28 LGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGF-----GH----PALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSL 98 (410)
T ss_dssp CSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTT-----CC----HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCC-----Ch----HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 4555544456676655544321 1234454321 11 234455555555 445 6788999999888
Q ss_pred HHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-------------------ccccc-cCCCEeEE
Q 002263 130 EAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-------------------KDIDY-KSGDVCGV 189 (946)
Q Consensus 130 ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-------------------~~l~~-i~~~t~~v 189 (946)
+.++.++. . +||+|+++...|+.+...++. .|.+++.+++ +++++ +++++++|
T Consensus 99 ~~~~~~~~-~--~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v 171 (410)
T 3e2y_A 99 FNSIQGLV-D--PGDEVIIMVPFYDCYEPMVRM----AGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171 (410)
T ss_dssp HHHHHHHC-C--TTCEEEEEESCCTTHHHHHHH----TTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEE
T ss_pred HHHHHHhc-C--CCCEEEEeCCCchhhHHHHHH----cCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEE
Confidence 87766552 3 789999999999988877643 4777666543 34555 67789999
Q ss_pred EEEcC-CCceee---cchHHHHHHHHhCCcEEEEEecCccccCC-----CC----CCCccceEEEecc-ccccccCCCCC
Q 002263 190 LVQYP-GTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTIL-----KP----PGELGADIVVGSA-QRFGVPMGYGG 255 (946)
Q Consensus 190 ~v~~p-n~~G~i---~di~~i~~~a~~~gal~~v~a~~~al~~l-----~~----~~~~GaDi~v~s~-k~lg~P~~~GG 255 (946)
++++| |.+|.+ +++++|+++|+++|++++++. ..+.... .+ +...+.++++.|. |.|+.| |
T Consensus 172 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~----G 246 (410)
T 3e2y_A 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDE-VYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVT----G 246 (410)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCG----G
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEh-hhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCC----C
Confidence 99998 679998 589999999999999999953 2222111 01 1234567888887 888532 3
Q ss_pred CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHH------HhChh
Q 002263 256 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV------YHGPE 329 (946)
Q Consensus 256 P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~------~~g~~ 329 (946)
..+|++++++++++.+... +...+.+. +.....+..+++ . ....+
T Consensus 247 ~r~G~~~~~~~~~~~~~~~--------------------------~~~~~~~~-~~~~~~a~~~~l--~~~~~~~~~~~~ 297 (410)
T 3e2y_A 247 WKLGWSIGPAHLIKHLQTV--------------------------QQNSFYTC-ATPLQAALAEAF--WIDIKRMDDPEC 297 (410)
T ss_dssp GCCEEEECCHHHHHHHHHH--------------------------HHTTTCCC-CHHHHHHHHHHH--HHHHTTTTSTTS
T ss_pred ceEEEEEECHHHHHHHHHH--------------------------HHhhccCC-ChHHHHHHHHHH--HhhhccccchHH
Confidence 4579999988877654100 00111111 112222222222 2 12355
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--------------HHHHHHHH-HHcCCeeeee----
Q 002263 330 GLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--------------AHAIASAA-YKIEMNLRVV---- 390 (946)
Q Consensus 330 Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--------------~~~v~~~L-~~~GI~~~~~---- 390 (946)
.++++.++..++.+++.+.|+++| +++.......-+.+++.. ..++.++| .++||.+..-
T Consensus 298 ~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~ 376 (410)
T 3e2y_A 298 YFNSLPKELEVKRDRMVRLLNSVG-LKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFC 376 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT-CEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhC
Confidence 688899999999999999999997 876532111112232211 23677765 4679987531
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 -------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 -------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+|+|++. ++++|+++++.|..
T Consensus 377 ~~~~~~~~~~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 377 DSKSKPHFEKLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp CTTTHHHHTTEEEEECCC--CHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHh
Confidence 13789999775 99999999999864
No 329
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.63 E-value=9.3e-15 Score=168.73 Aligned_cols=291 Identities=17% Similarity=0.230 Sum_probs=175.3
Q ss_pred HHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHHcCCEEEEEcCCC
Q 002263 522 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVSVGTDA 599 (946)
Q Consensus 522 ~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~~G~~vv~v~~~~ 599 (946)
..++.+.++++++ .+. .++.++|++++++++.+++.+. ++++|++ ..+.||....+....|..+..++...
T Consensus 95 ~~~l~~~la~~~~~~~~-v~~~~~Gsea~~~ai~~a~~~~------~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~ 167 (429)
T 3k28_A 95 ENKLAKLVIERVPSIEI-VRMVNSGTEATMSALRLARGYT------GRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPD 167 (429)
T ss_dssp HHHHHHHHHHHSTTCSE-EEEESSHHHHHHHHHHHHHHHH------TCCEEEEEETCCCCSCGGGCSSCCTTC-----CC
T ss_pred HHHHHHHHHHhCCCCCE-EEEeCChHHHHHHHHHHHHHhh------CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCC
Confidence 4577888999885 333 3667889888877766666541 3456665 56778877655433333222111111
Q ss_pred -CCC-------------CCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC----HHHHHHHHHHcCCEEEEecccccc
Q 002263 600 -KGN-------------INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYMDGANMNA 660 (946)
Q Consensus 600 -~g~-------------~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~----i~~I~~ia~~~g~ll~vD~a~~~a 660 (946)
.+. .|+++|+++++++.+++++|+++.++ +.|++. + +++|.++|++||++||+|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~-~~~~~l~~l~~l~~~~~~~li~DEv~--- 243 (429)
T 3k28_A 168 SPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVP-PQPGFLEGLREVTEQNGALLIFDEVM--- 243 (429)
T ss_dssp CTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBC-CCTTHHHHHHHHHHHHTCEEEEECTT---
T ss_pred cCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCccc-CCHHHHHHHHHHHHHcCCEEEEeccc---
Confidence 111 18999999998655677777776554 467765 4 999999999999999999975
Q ss_pred cccccCCCc--------cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCccc
Q 002263 661 QVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 732 (946)
Q Consensus 661 ~~gl~~pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~ 732 (946)
.++ +.+. ...|++++ .|+|+ +|.++|++++++++.+.+.... .....+..+
T Consensus 244 -~g~-~~g~~~~~~~~~~~~di~t~--sK~~~-----~G~~iG~~~~~~~~~~~~~~~~-----------~~~~~~t~~- 302 (429)
T 3k28_A 244 -TGF-RVAYNCGQGYYGVTPDLTCL--GKVIG-----GGLPVGAYGGKAEIMRQVAPSG-----------PIYQAGTLS- 302 (429)
T ss_dssp -TTT-TSSTTHHHHHHTCCCSEEEE--CGGGG-----TTSCCEEEEECHHHHTTBTTTS-----------SBCCCCTTT-
T ss_pred -ccc-ccCcchHHHHhCCCCceehh--hhhhc-----CCCCeEEEEEcHHHHhhhccCC-----------CccccCCCC-
Confidence 334 3332 23688776 49884 4678999999988776553110 000001111
Q ss_pred CccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeeEEEeccccc------
Q 002263 733 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLK------ 801 (946)
Q Consensus 733 ~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~~~------ 801 (946)
++...++++.+.+..+. .+..++...+.+++.++|++. +.. ..++ .+.+ +.+.+....
T Consensus 303 ---~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~ 371 (429)
T 3k28_A 303 ---GNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEKHGIPHHINR-AGSM---IGIFFTDEPVINYDA 371 (429)
T ss_dssp ---TCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE-ETTE---EEEESSSSCCCSHHH
T ss_pred ---CChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEe-eccE---EEEEEecCCcccccc
Confidence 23334444555555443 344555667788888888763 222 1111 1222 233332100
Q ss_pred --ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 802 --NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 802 --~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
...+....++.+.|.++|+.+.... .+.+|++ ...|++|+++++++|+++++++
T Consensus 372 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~r~~--~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 372 AKSSNLQFFAAYYREMVEQGVFLPPSQ---FEGLFLS--TVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp HTTSCHHHHHHHHHHHHHTTEECCSST---TSCBCCC--TTCCHHHHHHHHHHHHHHHHTC
T ss_pred cccccHHHHHHHHHHHHHCCeEEecCC---CCCEEEE--CCCCHHHHHHHHHHHHHHHHHH
Confidence 0001124678899999999875432 2456664 4688999999999999887653
No 330
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.63 E-value=2.8e-15 Score=166.96 Aligned_cols=268 Identities=13% Similarity=0.111 Sum_probs=177.2
Q ss_pred HHHHHHHHHhhC---CCcccccC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC
Q 002263 523 NNLGEWLCTITG---FDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 598 (946)
Q Consensus 523 ~el~~~la~l~G---~~~~~l~~-~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~ 598 (946)
.++++.++++++ .+...+.. ++|+++. .++++.+ +++|+++ ..|+.+...+...|++++.+|.+
T Consensus 59 ~~lr~~la~~~~~~~~~~~~v~~~~G~~~al---~~~~~~~--------gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~ 126 (335)
T 1uu1_A 59 EELIEKILSYLDTDFLSKNNVSVGNGADEII---YVMMLMF--------DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT 126 (335)
T ss_dssp HHHHHHHHHHHTCSSCCGGGEEEESSHHHHH---HHHHHHS--------SEEEECS-SSCHHHHHHHHHHTCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCCCHHHEEEcCChHHHH---HHHHHHh--------CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC
Confidence 467788888888 66544444 4444443 3334432 3689988 87766666678899999999998
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccc-cccC-CCccCCCEE
Q 002263 599 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTS-PGYIGADVC 675 (946)
Q Consensus 599 ~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl~~-pg~~GaDi~ 675 (946)
+++.+|+++| +++++|++++|+ .+|.+. +.+++.++++.+| ++++|+++..... .+.. .+..+.+++
T Consensus 127 ~~~~~d~~~l--------~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~ 196 (335)
T 1uu1_A 127 KDLRIPEVNV--------GEGDVVFIPNPNNPTGHVF-EREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAV 196 (335)
T ss_dssp TTSCCCCCCC--------CTTEEEEEESSCTTTCCCC-CHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEE
T ss_pred CCCCCCHHHc--------CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEE
Confidence 7777888776 367889989995 689988 7999999999888 9999998752111 1111 123456788
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+.+++|+|+. .|.++|++++++++.+.+... . . ..+.+ .....++.+++.. .+.
T Consensus 197 ~~s~sK~~g~----~G~r~G~~~~~~~~~~~l~~~------------~--~--~~~~~----~~~~~~~~~~l~~--~~~ 250 (335)
T 1uu1_A 197 IRTFSKAFSL----AAQRVGYVVASEKFIDAYNRV------------R--L--PFNVS----YVSQMFAKVALDH--REI 250 (335)
T ss_dssp EEESTTTTTC----GGGCCEEEEECHHHHHHHHHH------------S--C--TTCSC----HHHHHHHHHHHHT--HHH
T ss_pred EecchhhcCC----cccCeEEEEeCHHHHHHHHHh------------c--C--CCCcC----HHHHHHHHHHhCC--HHH
Confidence 8999999853 356789999987765443210 0 0 01111 2222223333433 235
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 002263 756 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 834 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lr 834 (946)
+.+..++...+++++.+.|++. +.+ ++ ..+.+ +.++++ +.+..++.++|.++||.+.. ..+++|
T Consensus 251 ~~~~~~~~~~~~~~l~~~L~~~g~~~-~~-~~~~~---~~~~~~------~~~~~~~~~~l~~~gi~v~~----~~~~iR 315 (335)
T 1uu1_A 251 FEERTKFIVEERERMKSALREMGYRI-TD-SRGNF---VFVFME------KEEKERLLEHLRTKNVAVRS----FREGVR 315 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCB-CC-CCSSE---EEEECC------THHHHHHHHHHHHHTEEEEE----ETTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcEE-cC-CCCeE---EEEECC------CCCHHHHHHHHHHCCEEEEE----CCCeEE
Confidence 6666777778889999999875 433 22 12222 445554 12467899999999998753 247899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHH
Q 002263 835 IEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 835 i~~t~~~t~~eid~~~~aL~~i 856 (946)
++++ +.+|+++++++|+++
T Consensus 316 is~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 316 ITIG---KREENDMILRELEVF 334 (335)
T ss_dssp EECC---CHHHHHHHHHHHHCC
T ss_pred EEeC---CHHHHHHHHHHHHhh
Confidence 9984 478899999998753
No 331
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.62 E-value=5.4e-15 Score=171.58 Aligned_cols=293 Identities=14% Similarity=0.113 Sum_probs=179.3
Q ss_pred HHHHHHHHhh----CCCcccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE-------
Q 002263 524 NLGEWLCTIT----GFDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK------- 591 (946)
Q Consensus 524 el~~~la~l~----G~~~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~------- 591 (946)
++++.+++++ +.+...+..++| +++.. .+ ..+. .++++|+++...|..+...+...|.+
T Consensus 115 ~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~-~~---~~l~-----~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~ 185 (449)
T 3qgu_A 115 ALREAVASTFYGHAGRAADEIFISDGSKCDIA-RI---QMMF-----GSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTG 185 (449)
T ss_dssp HHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH-HH---HHHH-----CSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSS
T ss_pred HHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH-HH---HHHh-----CCCCEEEEcCCCChhHHHHHHHcCCcccccccc
Confidence 4555566655 444444444444 43332 22 2221 24678999999888888888899998
Q ss_pred ---EEEEcCCCCC--CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEecccccc-cc
Q 002263 592 ---IVSVGTDAKG--NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QV 662 (946)
Q Consensus 592 ---vv~v~~~~~g--~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~ 662 (946)
++.+++++++ ..|+++ . +++++|++++|+ .+|.+. +++++|+++|+++|+++++|+++... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~ 257 (449)
T 3qgu_A 186 FDGIEYMVCNPDNHFFPDLSK-------A-KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISN 257 (449)
T ss_dssp BTTEEEEECCGGGTTCCCGGG-------C-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCC
T ss_pred cceeEEEecccccCCcCChhH-------c-CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcC
Confidence 9999987653 334322 1 578899999995 688875 25899999999999999999987421 11
Q ss_pred cccC------CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccc
Q 002263 663 GLTS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 736 (946)
Q Consensus 663 gl~~------pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g 736 (946)
+-.. ++..+.++++.+++|+|+. +|.++|++++++++.+......... + .........+.
T Consensus 258 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~---- 323 (449)
T 3qgu_A 258 PDCPKTIYEIPGADEVAIETCSFSKYAGF----TGVRLGWTVVPKALKYANGEPVHAD---W---NRVMTTCFNGA---- 323 (449)
T ss_dssp TTSCSSGGGSTTGGGTEEEEEECSGGGTC----TTCCCEEEECCTTCBCTTSCBHHHH---H---HHHHHHSCCCC----
T ss_pred CCCCCCHhhccCCCCcEEEEecchhhcCC----ccceeEEEecCHHHHhhhhhhHHHH---H---HHHhhcccCCC----
Confidence 1001 1112456888899999853 4788999999887765300000000 0 00000000011
Q ss_pred hhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHH
Q 002263 737 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 815 (946)
Q Consensus 737 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L 815 (946)
+.....++.+.+...+.+.+.+..++...+.+++.+.|++. +.+. ++.+..+ +.++++ +.+..++.++|
T Consensus 324 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~--~~~~~~------~~~~~~~~~~l 393 (449)
T 3qgu_A 324 SNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVY--GGDDAPY--IWVGFP------GKPSWDVFAEI 393 (449)
T ss_dssp CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE--ESSSSSE--EEEECT------TSCHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeee--CCCCeeE--EEEECC------CCCHHHHHHHH
Confidence 12222223333333334556677777788899999999875 5443 2222222 445553 45788999998
Q ss_pred HHC-CcccCC-CCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 816 MDY-GFHGPT-MSW-P-VPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 816 ~~~-Gi~~~~-~~~-p-~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.++ ||.+.. ..| + ..+.+||++. .++++|+++++.|++++++
T Consensus 394 ~~~~gI~v~pg~~f~~~~~~~iRis~~--~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 394 LERCNIVTTPGSGYGPAGEGFVRASAF--GSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp HHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHC-
T ss_pred HHHCCEEEecchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 875 998632 222 1 2589999964 4899999999999887543
No 332
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.62 E-value=2.9e-15 Score=171.08 Aligned_cols=281 Identities=15% Similarity=0.159 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~ 596 (946)
...++++.+++++|.+. .+..++|+++. .++++ +. .++++|+++...|+.... .++..|++++.++
T Consensus 56 ~~~~lr~~la~~~g~~~-~i~~~sGt~a~---~~al~-~~-----~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 56 NRENLERAVAALENAQY-GLAFSSGSATT---ATILQ-SL-----PQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp HHHHHHHHHHHHTTCSE-EEEESCHHHHH---HHHHH-TS-----CSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred hHHHHHHHHHHHhCCCc-EEEECChHHHH---HHHHH-Hc-----CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 46789999999999874 45566776544 33344 21 246889998876653222 2456799999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHc----CCEEEEecccccccccccCCCccC
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN----GGQVYMDGANMNAQVGLTSPGYIG 671 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~----g~ll~vD~a~~~a~~gl~~pg~~G 671 (946)
++ | ++|+++++ ++|++|++++|+ .+|.+. |+++|+++|+++ |+++++|+++... .+..+..+|
T Consensus 126 ~~-----d-~~l~~~i~---~~t~lv~~~~~~nptG~~~-~l~~i~~la~~~~~~~~~~livD~a~~~~--~~~~~~~~~ 193 (393)
T 1n8p_A 126 DL-----L-NDLPQLIK---ENTKLVWIETPTNPTLKVT-DIQKVADLIKKHAAGQDVILVVDNTFLSP--YISNPLNFG 193 (393)
T ss_dssp SH-----H-HHHHHHSC---SSEEEEEECSSCTTTCCCC-CHHHHHHHHHHHTTTTTCEEEEECTTTHH--HHCCGGGGT
T ss_pred CC-----h-HHHHHhcc---cCceEEEEECCCCCcceec-CHHHHHHHHHHhCCCCCCEEEEeCCcccc--ccCCHHHcC
Confidence 75 7 89999886 789999999994 789998 799999999999 9999999987532 223566779
Q ss_pred CCEEEeCCCcccccCCCCCCCc--c-eeEEEe-cccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPG--M-GPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg--~-G~i~~~-~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
+|+++.++||+|+ |+| + |+++++ +.+.+.+.... ...+ .+.+ .. .+++.
T Consensus 194 ~di~~~S~sK~~g------~~G~rigG~~~~~~~~~~~~l~~~~-----------~~~g---~~~~----~~---~~~~~ 246 (393)
T 1n8p_A 194 ADIVVHSATKYIN------GHSDVVLGVLATNNKPLYERLQFLQ-----------NAIG---AIPS----PF---DAWLT 246 (393)
T ss_dssp CSEEEEETTTTTT------CSSCCCCEEEEESCHHHHHHHHHHH-----------HHHC---CCCC----HH---HHHHH
T ss_pred CeEEEEECccccc------CCCCceeEEEEeCCHHHHHHHHHHH-----------HhcC---CCCC----HH---HHHHH
Confidence 9999999999874 344 5 888885 45544331100 0000 0101 11 12222
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhccCC-e---eeccCC-------------Cce-eeeEEEecccccccCCCCHH
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEKHYP-I---LFRGVN-------------GTV-AHEFIVDLRGLKNTAGIEPE 809 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~-v---~~~~~~-------------~~~-~~e~v~~~~~~~~~~g~~~~ 809 (946)
+..+ +.+....++...++.++.+.|++... + .+++-. +.. .+.+.|.++. ...+..
T Consensus 247 ~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~----~~~~~~ 320 (393)
T 1n8p_A 247 HRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKG----GAEAAS 320 (393)
T ss_dssp HHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESS----CHHHHH
T ss_pred Hhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCC----cHHHHH
Confidence 2222 23444455566778888888876522 2 122100 001 2234455431 001234
Q ss_pred HHHHHHHHCCcccC------------CCCC-----------CC-CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 810 DVAKRLMDYGFHGP------------TMSW-----------PV-PGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 810 ~i~~~L~~~Gi~~~------------~~~~-----------p~-~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
.+.+.|...++.+. .... .+ .+.+|+++...+++++++.|.++|+++
T Consensus 321 ~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 321 KFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 45555433332211 0000 01 378999999999999999999999865
No 333
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.62 E-value=5.5e-15 Score=167.62 Aligned_cols=285 Identities=16% Similarity=0.149 Sum_probs=167.9
Q ss_pred HHHHHHHHHhhCCC--cccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH---HHHHcCCEEEEEcC
Q 002263 523 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGT 597 (946)
Q Consensus 523 ~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~---~a~~~G~~vv~v~~ 597 (946)
.++++.+++++|.+ ...+.+++|+++... +++.+ + +++|+++...|+.+.. .+...|++++.+
T Consensus 61 ~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~---~~~~~---~----gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-- 128 (374)
T 2aeu_A 61 EKVNEYGLKHLGGDENDKCVGFNRTSSAILA---TILAL---K----PKKVIHYLPELPGHPSIERSCKIVNAKYFES-- 128 (374)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEESSHHHHHHH---HHHHH---C----CSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--
T ss_pred HHHHHHHHHHhCCCCcceEEEEcChHHHHHH---HHHhC---C----CCEEEEecCCCCccHHHHHHHHHcCcEEEEe--
Confidence 46777778889983 223556777766543 34432 2 4789988876655443 567889999888
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEE-EEEeCCC-ccc-ccccCHHHHHHHHHHcCCEEEEecccccccc-cccC--CCccC
Q 002263 598 DAKGNINIEELRKAAEANRDNLST-LMVTYPS-THG-VYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTS--PGYIG 671 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~-vvvt~Pn-~~G-~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~-gl~~--pg~~G 671 (946)
.|+++|+++ + +++++ |++++|+ .+| ... ++++|+++|+++|+++++|+++..... .... +..++
T Consensus 129 -----~d~~~l~~~-~---~~~~~~v~~~~p~nptG~~~~-~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 198 (374)
T 2aeu_A 129 -----DKVGEILNK-I---DKDTLVIITGSTMDLKVIELE-NFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG 198 (374)
T ss_dssp -----SCHHHHHTT-C---CTTEEEEEECBCTTSCBCCHH-HHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT
T ss_pred -----CCHHHHHhc-C---CCccEEEEEccCCCCCCCCcc-cHHHHHHHHHHcCCEEEEECCcccccccccccCCccccC
Confidence 389999887 4 68899 9998995 678 666 799999999999999999998643221 1111 34468
Q ss_pred CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Q 002263 672 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 751 (946)
Q Consensus 672 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l 751 (946)
.|+++.++||++ +||++|++++++++.+.+.... . .. ..+. +...+.++.+.+..+
T Consensus 199 ~di~~~S~sK~l------~g~~~G~~~~~~~~~~~l~~~~--~-----------~~-~~~~----~~~~~~a~~~al~~~ 254 (374)
T 2aeu_A 199 ADLVVTSTDKLM------EGPRGGLLAGKKELVDKIYIEG--T-----------KF-GLEA----QPPLLAGIYRALKNF 254 (374)
T ss_dssp CSEEEEETTSSS------SSCSCEEEEEEHHHHHHHHHHH--H-----------TT-TCBC----CHHHHHHHHHHHHHC
T ss_pred CcEEEecCcccc------cCcceEEEEECHHHHHHHHHhh--c-----------cc-cCCC----CHHHHHHHHHHHHHH
Confidence 999999999986 4589999999887665432100 0 00 0111 122222333444443
Q ss_pred cHhhHHHHHHHHHHHHHHH----HHHHhcc---C----Cee-eccCCCceeeeEEEecccccccCCCCHHHHHHHH-HHC
Q 002263 752 GSKGLTEASKIAILNANYM----AKRLEKH---Y----PIL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDY 818 (946)
Q Consensus 752 G~eGl~~~~~~~~~~a~~l----~~~L~~~---~----~v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L-~~~ 818 (946)
..+-+ ++...+++++ .+.|.+. + .+. ...+.+.++ +..+...... ..+..+++.++ .++
T Consensus 255 ~~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~--~~~~~~~~~~--~~~~~~~~~~ll~~~ 326 (374)
T 2aeu_A 255 NLERI----RKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVI--KRVYKDDTIN--IKKLIEIGFNLLKNY 326 (374)
T ss_dssp CHHHH----HHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEE--EEEESSHHHH--HHHHHHHHHHHHHHH
T ss_pred hHHHH----HHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEE--Eeeccccccc--ccchHHHHHHHHHhC
Confidence 22122 2333444444 3444332 1 111 112222111 1122221000 00112255444 468
Q ss_pred CcccC-CCCCC-CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHH
Q 002263 819 GFHGP-TMSWP-VPGTLMIEPTE-SESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 819 Gi~~~-~~~~p-~~~~lri~~t~-~~t~~eid~~~~aL~~i~~e~~ 861 (946)
|+.+. ...|| ..+.+||+++. ...+.++++++++|+++++++.
T Consensus 327 gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 327 GIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp CEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 99853 33444 24689999974 3334459999999999888764
No 334
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.62 E-value=3e-15 Score=170.99 Aligned_cols=271 Identities=13% Similarity=0.060 Sum_probs=176.7
Q ss_pred HHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCe--EEEEec------
Q 002263 104 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI--KVVVSD------ 175 (946)
Q Consensus 104 ~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi--~v~~~~------ 175 (946)
+++.+++++|.+.+++ ++.+||.++++++.++ .. +||+|+++...|+++...+.. ++..|. +.+.++
T Consensus 74 ar~~la~~~g~~~~~i-~~~sGt~a~~~~~~~~-~~--~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ 148 (407)
T 2dkj_A 74 AIERAKALFGAAWANV-QPHSGSQANMAVYMAL-ME--PGDTLMGMDLAAGGHLTHGSR-VNFSGKLYKVVSYGVRPDTE 148 (407)
T ss_dssp HHHHHHHHHTCSEEEC-CCSSHHHHHHHHHHHH-CC--TTCEEEEECGGGTCCGGGTCT-TSHHHHHSEEEEECCCTTTS
T ss_pred HHHHHHHHhCCCcceE-EecchHHHHHHHHHHh-cC--CCCEEEEecccccCccchHHH-HHhcCceEEEEecCCCcccC
Confidence 5569999999986444 4456666777666554 23 789999999999877421100 111122 333332
Q ss_pred ---cccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCC-----CCCCCccceEEEecc-
Q 002263 176 ---LKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA- 244 (946)
Q Consensus 176 ---~~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~~GaDi~v~s~- 244 (946)
++++++ ++ .++++|++.+|++ |.+.|+++|.++|+++|+++++|. ..+.|.. ..+.+ .+|++++|.
T Consensus 149 ~~d~~~l~~~l~~~~~~~v~~~~p~~-~~~~~l~~i~~l~~~~~~~li~De-a~~~g~~~~~~~~~~~~-~~di~~~s~s 225 (407)
T 2dkj_A 149 LIDLEEVRRLALEHRPKVIVAGASAY-PRFWDFKAFREIADEVGAYLVVDM-AHFAGLVAAGLHPNPLP-YAHVVTSTTH 225 (407)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECCSSC-CSCCCHHHHHHHHHHHTCEEEEEC-TTTHHHHHTTCSCCCTT-TCSEEEEESS
T ss_pred ccCHHHHHHHHhhcCCeEEEEecccc-CCCCCHHHHHHHHHHcCCEEEEEc-cccccccccCccCCccc-cccEEEEecc
Confidence 345555 55 3789998877754 678899999999999999999943 3333221 11122 389999998
Q ss_pred ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHH
Q 002263 245 QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 323 (946)
Q Consensus 245 k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~ 323 (946)
|+++ ||..|+++++ +++.+.+.... .+ ...+|.|. ....+..+++
T Consensus 226 K~l~------g~~~G~~~~~~~~~~~~l~~~~---------------------~~--~~~~~~~~---~~~~a~~~al-- 271 (407)
T 2dkj_A 226 KTLR------GPRGGLILSNDPELGKRIDKLI---------------------FP--GIQGGPLE---HVIAGKAVAF-- 271 (407)
T ss_dssp GGGC------CCSCEEEEESCHHHHHHHHHHH---------------------TT--TTCSSCCH---HHHHHHHHHH--
T ss_pred ccCC------CCCceEEEECCHHHHHHHHhhh---------------------cc--cccCCCcH---HHHHHHHHHH--
Confidence 7553 3445899999 67766541100 00 00122222 1222333333
Q ss_pred HHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC----CHHHHHHHHHHcCCeeeee--------
Q 002263 324 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA----DAHAIASAAYKIEMNLRVV-------- 390 (946)
Q Consensus 324 ~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~----~~~~v~~~L~~~GI~~~~~-------- 390 (946)
..+..++++++.++..++.+++.+.|+++| +++..+ .....+.+.++ ...++.+.|.++||.++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~ 350 (407)
T 2dkj_A 272 FEALQPEFKEYSRLVVENAKRLAEELARRG-YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKP 350 (407)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSC
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-ceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcccccc
Confidence 333346889999999999999999999997 888742 22334555554 2778999999999987642
Q ss_pred --cCCeEEEEeccC----CCHHHHHHHHHHHhC
Q 002263 391 --DSNTVTASFDET----TTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 --~~~~lris~~~~----~t~edid~ll~~l~~ 417 (946)
.++.+|+|++.+ .|++|+++++++|..
T Consensus 351 ~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 383 (407)
T 2dkj_A 351 PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR 383 (407)
T ss_dssp TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred ccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence 146799999874 799999999999963
No 335
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.62 E-value=5.4e-14 Score=161.97 Aligned_cols=277 Identities=15% Similarity=0.095 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
.+.++++.+++++|.+ ++.+++|||.++++++.++. +||+|+++...|+++...++ ..|++++.++++
T Consensus 53 ~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~l~~l~----~gd~Vlv~~~~~~~~~~~~~----~~G~~~~~v~~~~~ 122 (424)
T 2po3_A 53 LVREFEERVAGLAGVR--HAVATCNATAGLQLLAHAAG----LTGEVIMPSMTFAATPHALR----WIGLTPVFADIDPD 122 (424)
T ss_dssp HHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHHT----CCSEEEEESSSCTHHHHHHH----HTTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcC----CCCEEEECCCccHHHHHHHH----HcCCEEEEEecCCC
Confidence 3557889999999985 58899999988888777663 57999999999999988764 358888887653
Q ss_pred -------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCC---CCCCccceEEEecc-c
Q 002263 178 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGSA-Q 245 (946)
Q Consensus 178 -------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~---~~~~~GaDi~v~s~-k 245 (946)
+|++ +++++++|++++ .+|.+.|+++|.++|+++|+++++|. ..+.+... +.+.+ .|++++|. |
T Consensus 123 ~~~~d~~~l~~~i~~~~~~v~~~~--~tG~~~~l~~i~~la~~~~~~li~De-a~~~g~~~~~~~~~~~-~di~~~S~sk 198 (424)
T 2po3_A 123 TGNLDPDQVAAAVTPRTSAVVGVH--LWGRPCAADQLRKVADEHGLRLYFDA-AHALGCAVDGRPAGSL-GDAEVFSFHA 198 (424)
T ss_dssp TSSBCHHHHGGGCCTTEEEEEEEC--GGGCCCCHHHHHHHHHHTTCEEEEEC-TTCTTCEETTEETTSS-SSEEEEECCT
T ss_pred cCCcCHHHHHHhhCcCCcEEEEEC--CCCCcCCHHHHHHHHHHcCCEEEEEC-ccccCCeECCeecccc-cCEEEEeCCC
Confidence 3455 677899999876 58999999999999999999999943 33433221 12222 58988886 3
Q ss_pred cccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCc-ceEEecccccccccccccCCCccchHHHHHHHHHHHH
Q 002263 246 RFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKP-ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 323 (946)
Q Consensus 246 ~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~-~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~ 323 (946)
..+ +||+.+|++.++ +++.+.+..... .+.. .+.. . ..++..-. ..+ .+++
T Consensus 199 ~K~----l~~~~~G~~v~~~~~l~~~l~~~~~------~~~~~~~~~-----~-----~~g~~~~~--~~~---~aa~-- 251 (424)
T 2po3_A 199 TKA----VNAFEGGAVVTDDADLAARIRALHN------FGFDLPGGS-----P-----AGGTNAKM--SEA---AAAM-- 251 (424)
T ss_dssp TSS----SCCSSCEEEEESCHHHHHHHHHHHB------TTTTCTTCC-----T-----TCCCBCCC--CHH---HHHH--
T ss_pred CCC----ccCCCCeEEEeCCHHHHHHHHHHHh------cCccccccc-----c-----ccCcCCCc--CHH---HHHH--
Confidence 332 233457899888 676655421100 0000 0100 0 00111000 111 1111
Q ss_pred HHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---C--cCeEEEecC------CHHHHHHHHHHcCCeeeeecC
Q 002263 324 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---F--FDTVKVKCA------DAHAIASAAYKIEMNLRVVDS 392 (946)
Q Consensus 324 ~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~--~~~~~i~~~------~~~~v~~~L~~~GI~~~~~~~ 392 (946)
.+...++++++.++..++++++++.|+++.++++...+ . +..+.+.++ ...++.+.|.++||.++....
T Consensus 252 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 331 (424)
T 2po3_A 252 GLTSLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFS 331 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccC
Confidence 11123567888889999999999999988338887521 1 234545544 277899999999998764211
Q ss_pred -------------------------CeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 393 -------------------------NTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 393 -------------------------~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..++++++.++|++|+++++++|..
T Consensus 332 ~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~ 381 (424)
T 2po3_A 332 PGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRL 381 (424)
T ss_dssp SCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred CccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 1178888899999999999999973
No 336
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.62 E-value=5.2e-15 Score=170.00 Aligned_cols=259 Identities=15% Similarity=0.134 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhhCCCccccc--CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCH-----------HHHHH
Q 002263 522 FNNLGEWLCTITGFDSFSLQ--PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNP-----------ATAAM 587 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~--~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~-----------~~a~~ 587 (946)
..++++.+++++|.+...++ .++|++++.+++.++. +++|+||+++ ..|+... ..+..
T Consensus 76 ~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all--------~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~ 147 (427)
T 3hvy_A 76 RDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNL--------RPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLRE 147 (427)
T ss_dssp HHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTC--------CTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGG
T ss_pred HHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhc--------CCCCEEEEeCCCCchhHHHHhccccchhhhHHHH
Confidence 55778999999999876553 5778876644443321 3578999987 6665554 23455
Q ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeC----C-CcccccccCHHHHHHHHHH--cCCEEEEecccccc
Q 002263 588 CGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY----P-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNA 660 (946)
Q Consensus 588 ~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~----P-n~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a 660 (946)
.|++++.++. +++.+|+++|+++++++ ++|++|++++ | |.+|.+. |+++|+++||+ +|++++||+++...
T Consensus 148 ~G~~~~~v~~-~~~~~d~e~l~~~i~~~-~~tklV~i~~s~gyp~nptg~v~-dl~~i~~ia~~~~~g~~livD~a~~~~ 224 (427)
T 3hvy_A 148 YGVKYKMVDL-KDGKVDINTVKEELKKD-DSIKLIHIQRSTGYGWRKSLRIA-EIAEIIKSIREVNENVIVFVDNCYGEF 224 (427)
T ss_dssp GTCEEEECCC-BTTBCCHHHHHHHHHHC-TTEEEEEEESSCCSSSSCCCCHH-HHHHHHHHHHHHCSSSEEEEECTTCTT
T ss_pred cCCEEEEecC-CCCCcCHHHHHHHhhCC-CCCEEEEEECCCCCCCCccccHH-HHHHHHHHHHHhCCCCEEEEECCcccc
Confidence 7999999998 78899999999999742 5899999999 8 4688887 79999999999 89999999986422
Q ss_pred cccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhH
Q 002263 661 QVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 740 (946)
Q Consensus 661 ~~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~ 740 (946)
. ....|..+|+|+++.++||+|+. .|.|..|++++++++.+.+..... ....+...+..+..
T Consensus 225 ~-~~~~p~~~gaDiv~~S~sK~lgg---~g~~~GG~i~~~~~li~~l~~~~~-----------~~~~g~~~~~~~~~--- 286 (427)
T 3hvy_A 225 V-EEKEPTDVGADIIAGSLIKNIGG---GIATTGGYIAGKEEYVTQATFRVT-----------VPGIGGECGSTFGV--- 286 (427)
T ss_dssp T-SSSCGGGGTCSEEEEETTSGGGT---TTCCSCEEEEECHHHHHHHHHHHS-----------CTTTGGGCCCCTTC---
T ss_pred c-cCCCCcccCCeEEEECCcccccc---cccceEEEEEECHHHHHHHHHHhh-----------cCCcccccCCCHHH---
Confidence 1 12466778999999999999852 122677999999877665432100 00111111100111
Q ss_pred HHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCC
Q 002263 741 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 819 (946)
Q Consensus 741 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~G 819 (946)
++..+. |-+-+..+.++...++.++++.|++. +.+ ++++ ++..|..++.+. ++ ......++++.|....
T Consensus 287 ---a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~g~~V-~p~~-~~~~~~li~~~~-l~--~~~~~~~f~~~l~~~~ 356 (427)
T 3hvy_A 287 ---MRSLYE--GLFMAPHVTIEAVKGAVFCARIMELAGFDV-LPKY-NDKRTDIIQAIK-FN--DEKKLIDFIKGIQTAS 356 (427)
T ss_dssp ---HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTCEE-ESCT-TSCCSSSEEEEE-CS--SHHHHHHHHHHHHHTC
T ss_pred ---HHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhCCCee-cCCC-CCCCceEEEEEe-CC--CHHHHHHHHHHhcccc
Confidence 122222 22223456677788999999999886 665 6553 222233333332 11 1123457788887643
No 337
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.62 E-value=6.5e-15 Score=168.21 Aligned_cols=302 Identities=11% Similarity=0.052 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHhhCCCc-cc-cc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCC-HHHHHHc--CCEE
Q 002263 519 QEMFNNLGEWLCTITGFDS-FS-LQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PATAAMC--GMKI 592 (946)
Q Consensus 519 ~~~~~el~~~la~l~G~~~-~~-l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~-~~~a~~~--G~~v 592 (946)
.+...++++++++++|.+. .. +. +++|+++...++ +.+. .++ .+++....|+.. ...+... |.++
T Consensus 77 ~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~---~~l~-----~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~ 147 (398)
T 2fyf_A 77 KNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAA---FGLI-----DKR-SLHLTYGEFSAKFASAVSKNPFVGEP 147 (398)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHH---HHTC-----SSC-EEEEECSHHHHHHHHHHHHCTTSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHH---HHhc-----CCC-eEEEeCCHHHHHHHHHHHHhCCCCce
Confidence 4567889999999999973 22 44 567776654443 3321 123 234444434311 1134555 8899
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCc-c
Q 002263 593 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-I 670 (946)
Q Consensus 593 v~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~-~ 670 (946)
+.++++ +|..+..+ ++ ++|++|++++| |.+|.+. ++++|+++ +|+++++|+++... ..+.. .
T Consensus 148 ~~v~~~-~g~~~~~~----i~---~~~~~v~~~~~~nptG~~~-~~~~i~~~---~~~~vivD~a~~~~----~~~~~~~ 211 (398)
T 2fyf_A 148 IIITSD-PGSAPEPQ----TD---PSVDVIAWAHNETSTGVAV-AVRRPEGS---DDALVVIDATSGAG----GLPVDIA 211 (398)
T ss_dssp EEEECC-TTCCCCCC----CC---TTCSEEEEESEETTTTEEC-CCCCCTTC---C-CEEEEECTTTTT----TSCCCGG
T ss_pred EEEecC-CCCCCCcc----cc---CCCCEEEEeCcCCCcceec-chHHhhhh---cCCeEEEEeccccC----CcccCcc
Confidence 999987 44433221 33 68889999988 5789998 78888887 89999999986422 12222 2
Q ss_pred CCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCC-----CCccccCCCCCCC-C-CCCCCCCcccCccchhhHHHH
Q 002263 671 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-----SHPVVSTGGIPAP-E-KSQPLGTIAAAPWGSALILPI 743 (946)
Q Consensus 671 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp-----~~~v~~~~d~~~~-~-~~~~~~~i~~~~~g~~~~~~~ 743 (946)
++|++++++||+|+.| +|+|++++++++.+.+. ++......+.+.. . .... ....+. +...+.+
T Consensus 212 ~~di~~~s~sK~~~~~-----gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~---~~~~~~a 282 (398)
T 2fyf_A 212 ETDAYYFAPQKNFASD-----GGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKN-QTYNTP---AIATLAL 282 (398)
T ss_dssp GCSEEEECTTSTTCSC-----SSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTT-CCSSCC---CHHHHHH
T ss_pred cCcEEEEecCcccCCC-----CceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccC-CCCCCC---CHHHHHH
Confidence 5899999999998532 26899999887654431 0000000000000 0 0000 001111 1112223
Q ss_pred HHHHHHHHcHhh-HHHHHHHHHHHHHHHHHHHhccCCeeec--cCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCc
Q 002263 744 SYTYIAMMGSKG-LTEASKIAILNANYMAKRLEKHYPILFR--GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 820 (946)
Q Consensus 744 a~a~l~~lG~eG-l~~~~~~~~~~a~~l~~~L~~~~~v~~~--~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi 820 (946)
+.+.+..+..+| +.+..++...+++++.+.|++...+.+. ++.+...+.+.++++ .+.+..++.++|.++||
T Consensus 283 ~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L~~~gI 357 (398)
T 2fyf_A 283 LAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFV-----DDVDAGTVAKILRANGI 357 (398)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEEC-----TTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECC-----CCCCHHHHHHHHHHCCc
Confidence 344555556666 8888888889999999999875223221 111111113455553 25678999999999999
Q ss_pred ccCCCCCCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 821 HGPTMSWPV-PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 821 ~~~~~~~p~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+....... .+.+||++...+|++|+++++++|++++++
T Consensus 358 ~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 358 VDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp BCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred EEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 874321112 478999999888999999999999987653
No 338
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.62 E-value=2.4e-14 Score=169.97 Aligned_cols=327 Identities=12% Similarity=0.071 Sum_probs=188.8
Q ss_pred ccHHHHHHHHHHHHHHhhC--CCc---cccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcC
Q 002263 516 QGYQEMFNNLGEWLCTITG--FDS---FSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 589 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G--~~~---~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G 589 (946)
+|..++...+.+++.+..+ .+. ..+. +++|+++... +++.+....-..++++|+++...|..+...+...|
T Consensus 138 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~---~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g 214 (533)
T 3f6t_A 138 RCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVY---AFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKD 214 (533)
T ss_dssp SCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHH---HHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGG
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHH---HHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcC
Confidence 4666666667777766523 221 2333 3444444433 33321111012356899999987766655677889
Q ss_pred CEEEEEcCCC----CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHH-HcCCEEEEeccccccc
Q 002263 590 MKIVSVGTDA----KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIH-DNGGQVYMDGANMNAQ 661 (946)
Q Consensus 590 ~~vv~v~~~~----~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~-~~g~ll~vD~a~~~a~ 661 (946)
.+++.++++. ++.+|+++|+++++ +++++|++++|+ .+|.+. +++++|+++|+ ++|+++++|.++....
T Consensus 215 ~~~~~v~~~~~~~~~~~~d~~~l~~~l~---~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~ 291 (533)
T 3f6t_A 215 YELVEVDLHSYEKNDWEIEPNEIEKLKD---PSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFV 291 (533)
T ss_dssp SEEEEECCCEETTTTSEECHHHHHHHSC---TTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGS
T ss_pred CeEEEEEecCCcccCCCCCHHHHHHHhC---CCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccc
Confidence 9999999853 47799999999986 789999999995 689885 13568889998 6899999999864211
Q ss_pred ccccCCCc--cCCCEEEeCCCcccccCCCCCCCcceeEEEecc-----cCCCCCCCcc-------c-cCCCC--C-----
Q 002263 662 VGLTSPGY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-----LAPFLPSHPV-------V-STGGI--P----- 719 (946)
Q Consensus 662 ~gl~~pg~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-----l~~~lp~~~v-------~-~~~d~--~----- 719 (946)
.+...... .+.++++.|++|+|+.| |.++|+++++++ +...++.... + .+.+. -
T Consensus 292 ~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~r 367 (533)
T 3f6t_A 292 PNFKSIYSVVPYNTMLVYSYSKLFGCT----GWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDR 367 (533)
T ss_dssp TTCCCHHHHSGGGEEEEEESHHHHTCG----GGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHH
T ss_pred cCccCHhhcCCCCEEEEecCcccCCCc----ccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHH
Confidence 11111111 13458889999998533 567999999876 5554431000 0 00000 0
Q ss_pred -----CCCCCCCCCCcccCccchhhHHHHHHHHHHHH--------cHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCC
Q 002263 720 -----APEKSQPLGTIAAAPWGSALILPISYTYIAMM--------GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVN 786 (946)
Q Consensus 720 -----~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l--------G~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~ 786 (946)
...+...+.+.+ .....+++...+..+ ..+-+++..+....+.++|.+.|. . .+.+..++
T Consensus 368 l~~~~~~~~~~~~~~~~-----~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~~~ 440 (533)
T 3f6t_A 368 LCADSRSIGLYHTAGLS-----TPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PKDETDTN 440 (533)
T ss_dssp HHHHHTTTTTGGGCSCC-----HHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCSTTB
T ss_pred HHHHHHHHHHhcccCCC-----hHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-CccccCCC
Confidence 000001111111 111112221122223 223455556666677888888886 3 32222222
Q ss_pred CceeeeEEEeccccc-ccCC----------CCHHHHHHHHH-HCCcccCCC-CCC-CCCEEEEEcCCCCCHHHHHHHHHH
Q 002263 787 GTVAHEFIVDLRGLK-NTAG----------IEPEDVAKRLM-DYGFHGPTM-SWP-VPGTLMIEPTESESKEELDRYCDA 852 (946)
Q Consensus 787 ~~~~~e~v~~~~~~~-~~~g----------~~~~~i~~~L~-~~Gi~~~~~-~~p-~~~~lri~~t~~~t~~eid~~~~a 852 (946)
+..+ ++++++.+. ...+ .+..++..+|. ++||.+... .|. ..+++|+++.. .++++++++++.
T Consensus 441 ~g~~--~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~-~~~e~i~~~i~~ 517 (533)
T 3f6t_A 441 THYY--SLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQAN-LPTEDYALIGKQ 517 (533)
T ss_dssp CCSE--EEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSS-SCHHHHHHHHHH
T ss_pred ceEE--EEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEee-CCHHHHHHHHHH
Confidence 3222 345543110 0001 35566766665 779986432 222 25799999864 478999999999
Q ss_pred HHHHHHHHHH
Q 002263 853 LISIREEIAQ 862 (946)
Q Consensus 853 L~~i~~e~~~ 862 (946)
|.+++++..+
T Consensus 518 L~~~l~~~~~ 527 (533)
T 3f6t_A 518 VLELLKEYYE 527 (533)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 339
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.62 E-value=6.4e-15 Score=170.11 Aligned_cols=299 Identities=12% Similarity=0.120 Sum_probs=176.4
Q ss_pred ccHHHHHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcC------
Q 002263 516 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG------ 589 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G------ 589 (946)
+|..++...+.+++.+-++.+...+..++|++.....+ .... .++++|+++...|..+...+...|
T Consensus 98 ~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l---~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~ 169 (432)
T 3ei9_A 98 QGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRL---QVMF-----GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN 169 (432)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH---HHHH-----CTTCCEEEEESCCTHHHHHHHHHTCSCCEE
T ss_pred CCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHH---HHHc-----CCCCEEEEeCCCCHHHHHHHHHcCCccccc
Confidence 45555555555555443466654444445544332222 2222 246789999988887777777777
Q ss_pred ------CEEEEEcCCCCC--CCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccc
Q 002263 590 ------MKIVSVGTDAKG--NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANM 658 (946)
Q Consensus 590 ------~~vv~v~~~~~g--~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~ 658 (946)
.+++.++++.++ ..|++. .+++++|++++| |.+|.+. +++++|+++|++||+++++|.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~ 241 (432)
T 3ei9_A 170 TDVQKYGNIEYMRCTPENGFFPDLST--------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYA 241 (432)
T ss_dssp TTTTEETTCEEEECCGGGTTSCCGGG--------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG
T ss_pred ccccccCceEEeccCcccCCcCChhh--------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchH
Confidence 368888886543 344322 267889999999 5688874 258888889999999999999875
Q ss_pred cc-ccccc-C----CCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCccc
Q 002263 659 NA-QVGLT-S----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 732 (946)
Q Consensus 659 ~a-~~gl~-~----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~ 732 (946)
.. .++-. . ++..+.++++.+++|+|+. .|.++|++++++++...-....... + .......+. +.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~r~G~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~--~~ 311 (432)
T 3ei9_A 242 MYMSDDNPRSIFEIPGAEEVAMETASFSNYAGF----TGVRLGWTVIPKKLLYSDGFPVAKD---F-NRIICTCFN--GA 311 (432)
T ss_dssp GGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCT----TTTCCEEEECCTTCBCTTSCBHHHH---H-HHHHHHSCC--CS
T ss_pred hhccCCCCCChhhcCCCCCeEEEEecchhccCC----cccceEEEEEChHHhhcchHHHHHH---H-HHHhccccC--CC
Confidence 21 11100 0 1122456888999999953 4678999999877631100000000 0 000000000 11
Q ss_pred CccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccccccCCCCHHHH
Q 002263 733 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 811 (946)
Q Consensus 733 ~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i 811 (946)
+.....++.+.+...+.+.+.+..++...+.+++.+.|++. +.+. .+..+.+ +.++++ +.+..++
T Consensus 312 ----~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~---~~~~~~------~~~~~~~ 377 (432)
T 3ei9_A 312 ----SNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVY-GGKNAPY---VWVHFP------NQSSWDV 377 (432)
T ss_dssp ----CHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE-ECSSSSE---EEEECT------TSCHHHH
T ss_pred ----CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceec-CCCcceE---EEEECC------CCCHHHH
Confidence 11112222333322333446667777778899999999875 4442 2222322 456664 3567888
Q ss_pred HHHHHHC-CcccCC-CCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 812 AKRLMDY-GFHGPT-MSW-P-VPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 812 ~~~L~~~-Gi~~~~-~~~-p-~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
.++|.++ ||.+.. ..| + ..+.+||++ ..++++|++.++.|++-
T Consensus 378 ~~~ll~~~gv~v~~g~~f~~~~~~~iRis~--~~~~e~l~~~l~rl~~~ 424 (432)
T 3ei9_A 378 FAEILEKTHVVTTPGSGFGPGGEGFVRVSA--FGHRENILEACRRFKQL 424 (432)
T ss_dssp HHHHHHHHCEECEEGGGGCGGGTTEEEEEC--CSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCchHhCCCCCCEEEEEe--cCCHHHHHHHHHHHHHH
Confidence 8888764 998642 222 2 258899997 45899999988888754
No 340
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.62 E-value=1.9e-14 Score=169.67 Aligned_cols=314 Identities=13% Similarity=0.150 Sum_probs=187.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 591 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~ 591 (946)
.+|..++...+.+++.+..|.+ ... +.+++++++.. ++++.+.. .++++|+++...|..+...+...|++
T Consensus 133 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~---~~~~~l~~----~~gd~Vlv~~p~y~~~~~~~~~~g~~ 205 (500)
T 3tcm_A 133 SQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVH---LMMQLLIR----NEKDGILVPIPQYPLYSASIALHGGA 205 (500)
T ss_dssp TTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHH---HHHHHHCC----STTEEEEEEESCCTHHHHHHHHTTCE
T ss_pred CcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHH---HHHHHHcC----CCCCEEEEeCCCcHhHHHHHHHcCCE
Confidence 3576677777777777776744 333 44445554443 33333210 24689999999888888889999999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-cc
Q 002263 592 IVSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QV 662 (946)
Q Consensus 592 vv~v~~~~~--g~~D~e~L~~~i~~~---~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~ 662 (946)
++.++++++ +.+|+++|++++++. ..++++|++++| |.+|.+- +++++|+++|+++|+++++|.++... +.
T Consensus 206 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~ 285 (500)
T 3tcm_A 206 LVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYV 285 (500)
T ss_dssp EEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCC
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccC
Confidence 999999765 489999999999742 127889999999 4688874 25888888999999999999986421 11
Q ss_pred c---ccCC----CccC-----CC-EEEeCCCccc-ccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCC
Q 002263 663 G---LTSP----GYIG-----AD-VCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQ 725 (946)
Q Consensus 663 g---l~~p----g~~G-----aD-i~~~s~hK~f-~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~ 725 (946)
+ +.+. ..+| .+ +++.|++|+| +. .|.++|++.+ ++++.+.+... .
T Consensus 286 ~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~----~G~R~G~~~~~~~~~~~~~~l~~~--------------~ 347 (500)
T 3tcm_A 286 DNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGE----CGKRGGYFEITGFSAPVREQIYKI--------------A 347 (500)
T ss_dssp TTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCC----GGGCCEEEEEESCCTTHHHHHHHH--------------H
T ss_pred CCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCC----CccceEEEEEeCCCHHHHHHHHHH--------------H
Confidence 1 0000 0121 12 5566899998 43 2577899987 55554432100 0
Q ss_pred CCCCcccCccchhhHHHHHHHHHHH---------HcHhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEE--
Q 002263 726 PLGTIAAAPWGSALILPISYTYIAM---------MGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFI-- 794 (946)
Q Consensus 726 ~~~~i~~~~~g~~~~~~~a~a~l~~---------lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v-- 794 (946)
. ...+++..++.. +...+.. .-.+-+.++.++...+++++.+.|+++..+.+..+++.++ ++
T Consensus 348 ~-~~~~~~~~~q~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~--~~~~ 420 (500)
T 3tcm_A 348 S-VNLCSNITGQIL----ASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMY--VFPQ 420 (500)
T ss_dssp H-TTCCCCHHHHHH----HHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTE--ECCE
T ss_pred h-cccCCCHHHHHH----HHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEE--Eeee
Confidence 0 112222112211 1111110 0012234445566678889999998752332222233232 12
Q ss_pred Eecccc--c--ccCCCCHHH--HHHHHHHCCcccC-CCCC---CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 795 VDLRGL--K--NTAGIEPED--VAKRLMDYGFHGP-TMSW---PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 795 ~~~~~~--~--~~~g~~~~~--i~~~L~~~Gi~~~-~~~~---p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
++++.- . ...+..... +.+.|.++||.+. ...| +..+.+|+++. .++++++++++.|.+++++..+
T Consensus 421 ~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 421 ICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp ECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 222100 0 001222222 2355667899863 2223 22457999998 6789999999999999887654
No 341
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.62 E-value=3e-13 Score=151.28 Aligned_cols=295 Identities=14% Similarity=0.141 Sum_probs=191.4
Q ss_pred CCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcccc
Q 002263 61 MGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQK 140 (946)
Q Consensus 61 ~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~ 140 (946)
.+..+...|+.+.+.+.+...-+..|.+. ++ .++++.+|+++|.++.++.+++|+|.+++.++.++.
T Consensus 22 ~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----~~-----~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--- 88 (350)
T 3fkd_A 22 TTVWTDGDKDHLEKHLVENLNCIRHYPEP-----DA-----GTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--- 88 (350)
T ss_dssp CCSCCCSCCHHHHHHHHHTGGGGGSCCCT-----TC-----HHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT---
T ss_pred CCCCCCCCCHHHHHHHHHhHhHHhcCCCC-----cH-----HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC---
Confidence 44444557777766766543323333221 11 257789999999988899999999988777666552
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-ccccccC-CCEeEEEEEcC-CCceeecchHHHHHHHHhCC-cE
Q 002263 141 GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-KDIDYKS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VK 216 (946)
Q Consensus 141 ~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-~~l~~i~-~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~g-al 216 (946)
||+|+++...|+++...++ ..|++++.++. ++-..++ +++++|++.+| |.+|.+.|++++.++++.++ .+
T Consensus 89 --gd~Vi~~~p~~~~~~~~~~----~~g~~~~~v~~~~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 162 (350)
T 3fkd_A 89 --GSRSLIAIPSFAEYEDACR----MYEHEVCFYPSNEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTT 162 (350)
T ss_dssp --TCEEEEEESCCHHHHHHHH----HTTCEEEEEETTSCGGGSCCTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSE
T ss_pred --CCEEEEeCCCcHHHHHHHH----HcCCeEEEEecCCccccCccCCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCE
Confidence 7999999999999887764 36899999887 4433322 67899999998 67999999999999999876 66
Q ss_pred EEEEecCccccCCC------CCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceE
Q 002263 217 VVMATDLLALTILK------PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 289 (946)
Q Consensus 217 ~~v~a~~~al~~l~------~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~ 289 (946)
+++| +..+..... .....+.+++++|. |.|+.| |..+|++.+++++.+.+...
T Consensus 163 li~D-ea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~~~~~~~~~~~~~~~--------------- 222 (350)
T 3fkd_A 163 FVLD-QSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIP----GLRIGYIVANKDFMKRVAAF--------------- 222 (350)
T ss_dssp EEEE-CTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCG----GGCCEEEECCHHHHHHHHTT---------------
T ss_pred EEEE-CchhhhccCcchhhHHhhcCCCEEEEecCchhccCc----chheEeEEeCHHHHHHHHHh---------------
Confidence 6664 232221111 11245667889887 888643 33578999988877665110
Q ss_pred EecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEe
Q 002263 290 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK 369 (946)
Q Consensus 290 l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~ 369 (946)
+...+.|. ....+..++ +. .+..-.+++.+.. ++.+++++.|++++++++.... ..-+.+.
T Consensus 223 -----------~~~~~~~~---~~~~~~~~~--l~-~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~ 283 (350)
T 3fkd_A 223 -----------STPWAVNA---LAIEAAKFI--LI-HPAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSG-TTFFLLR 283 (350)
T ss_dssp -----------CCTTCSCH---HHHHHHHHH--HH-CTTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCS-SSEEEEE
T ss_pred -----------CCCCCCCH---HHHHHHHHH--Hh-CHHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCC-CcEEEEE
Confidence 00011111 111122111 22 1111122333333 7888999999988338886421 1223355
Q ss_pred cC--CHHHHHHHHHH-cCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 370 CA--DAHAIASAAYK-IEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 370 ~~--~~~~v~~~L~~-~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++ ++.++.++|.+ +||.++.- .++.+|+|++ +.+|+++++++|.
T Consensus 284 ~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~ 336 (350)
T 3fkd_A 284 LKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALE 336 (350)
T ss_dssp ESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHH
Confidence 54 37899999998 89988643 2578999976 8888888888886
No 342
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.62 E-value=3.1e-14 Score=163.63 Aligned_cols=292 Identities=14% Similarity=0.080 Sum_probs=186.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec
Q 002263 96 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 175 (946)
Q Consensus 96 g~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~ 175 (946)
|..+...++++.+++++|.+ +..++.+||.+++.++.+++.. +||+|+++...|+++...++ ..|++++.++
T Consensus 39 g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~~ 110 (418)
T 2c81_A 39 GEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIG--EGDEVIVPSLTWIATATAVL----NVNALPVFVD 110 (418)
T ss_dssp SSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCTHHHHHHH----HTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCccHhHHHHHH----HcCCEEEEEe
Confidence 33445667889999999987 4677888887777776665333 78999999999999988875 3588888876
Q ss_pred cc---------cccc-cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccC-C--CCCCCccceEEEe
Q 002263 176 LK---------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI-L--KPPGELGADIVVG 242 (946)
Q Consensus 176 ~~---------~l~~-i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~-l--~~~~~~GaDi~v~ 242 (946)
++ ++++ +++++++|++++ .+|.+.|+++|.++|+++|+++++|. ..+.+. . .+.+.++ |+++.
T Consensus 111 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~--~~G~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~~-~~~~~ 186 (418)
T 2c81_A 111 VEADTYCIDPQLIKSAITDKTKAIIPVH--LFGSMANMDEINEIAQEHNLFVIEDC-AQSHGSVWNNQRAGTIG-DIGAF 186 (418)
T ss_dssp BCTTTCSBCHHHHGGGCCTTEEEECCBC--CTTCCCCHHHHHHHHHHTTCEEEEEC-TTCTTCEETTEETTSSS-SEEEE
T ss_pred cCCCCCCcCHHHHHHhhCCCCeEEEEeC--CcCCcccHHHHHHHHHHCCCEEEEEC-cccccCccCCEeccccc-ceEEE
Confidence 53 3555 677899998765 57999999999999999999999943 334332 1 1123333 55555
Q ss_pred c--c-ccccccCCCCCCceEEEEEc-hhhhhcCCCce-EeEeecCCCCcceEEeccccccccccc--ccCCCccc-hHHH
Q 002263 243 S--A-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRI-VGVSIDSSGKPALRVAMQTREQHIRRD--KATSNICT-AQAL 314 (946)
Q Consensus 243 s--~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~-~G~s~d~~g~~~~~l~l~tre~~irre--~aTsni~t-~~~l 314 (946)
| + |.|+. | .+|++.++ +++.+++.... .|.... +.+ .....+.+ .+|.++.. +..+
T Consensus 187 s~s~~K~~~~-----g-~~g~~~~~~~~l~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~g~~~~~ 250 (418)
T 2c81_A 187 SCQQGKVLTA-----G-EGGIIVTKNPRLFELIQQLRADSRVYC--DDS--------SELMHGDMQLVKKGDIQGSNYCL 250 (418)
T ss_dssp ECCTTSSSCS-----S-SCEEEEESCHHHHHHHHHHHBTTEEEC--SCG--------GGCCTTCBSEEECCSSCCCBCCC
T ss_pred eccCCcccCC-----C-CeEEEEECCHHHHHHHHHHHHhCcccc--ccc--------cccccchhhccccccccCcCCCc
Confidence 4 3 66642 2 45788885 56655442111 111000 000 00000011 11122211 0001
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC------CcCeEEEecC-----C--HHHHHHHHH
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFDTVKVKCA-----D--AHAIASAAY 381 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~------~~~~~~i~~~-----~--~~~v~~~L~ 381 (946)
..+.+++... ..++++++.++..++++++.+.|+++.++++...+ .+..+.+.++ + ..++.+.|.
T Consensus 251 ~~~~aa~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 328 (418)
T 2c81_A 251 SEFQSAILLD--QLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILR 328 (418)
T ss_dssp CHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHH
T ss_pred CHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHH
Confidence 1122222111 23457888888899999999999988339887321 1234545554 2 788999999
Q ss_pred Hc-CCe---eeeec----------------------------------------CCeEEEEeccCC-CHHHHHHHHHHHh
Q 002263 382 KI-EMN---LRVVD----------------------------------------SNTVTASFDETT-TLEDVDKLFIVFA 416 (946)
Q Consensus 382 ~~-GI~---~~~~~----------------------------------------~~~lris~~~~~-t~edid~ll~~l~ 416 (946)
++ ||. ++... .+.||++++.++ |++|+++++++|+
T Consensus 329 ~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~ 408 (418)
T 2c81_A 329 EKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVA 408 (418)
T ss_dssp HHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHH
T ss_pred HcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHH
Confidence 98 999 64310 147999999999 9999999999996
Q ss_pred C
Q 002263 417 G 417 (946)
Q Consensus 417 ~ 417 (946)
.
T Consensus 409 ~ 409 (418)
T 2c81_A 409 E 409 (418)
T ss_dssp H
T ss_pred H
Confidence 3
No 343
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.62 E-value=1.4e-14 Score=168.97 Aligned_cols=286 Identities=11% Similarity=0.052 Sum_probs=166.4
Q ss_pred HHHHHHHHHhCCCCcce--E-EcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHH--------HHHHhhcCCCeEE
Q 002263 103 NFQTMIADLTGLPMSNA--S-LLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTID--------ICITRADGFDIKV 171 (946)
Q Consensus 103 e~q~~la~L~g~~~~~~--s-l~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~--------~~~~~a~~~gi~v 171 (946)
.+++.+++++|++.+.. . +..+||.+..++++++. . +||+|++++.+|.+.+. .+. ++ +..+++
T Consensus 104 ~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~-~--pGD~Vl~~~~~h~g~l~h~~~~~~~~i~-~~-g~~~~~ 178 (490)
T 2a7v_A 104 LCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL-Q--PHDRIMGLDLPDGGHLTHGYMSDVKRIS-AT-SIFFES 178 (490)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC-C--SCEECCC-------------------------------
T ss_pred HHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHc-C--CCCEecccCccccccccchhhhcchhHH-Hc-CCeEEE
Confidence 46699999999987532 2 34588888887777762 3 89999999988865432 111 11 112222
Q ss_pred EE---------eccccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEE-ecCccc---cCCCCCCCcc
Q 002263 172 VV---------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLAL---TILKPPGELG 236 (946)
Q Consensus 172 ~~---------~~~~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~-a~~~al---~~l~~~~~~G 236 (946)
+. +|+++|++ +. .++++|++..|+ +|.+.|+++|.++||++|+++++| +|..++ +....+-+ +
T Consensus 179 ~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~-~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~ 256 (490)
T 2a7v_A 179 MPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA-YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-H 256 (490)
T ss_dssp --CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSS-CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-T
T ss_pred EecccccccCCcCHHHHHHHHhhcCCcEEEEcCCC-CCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-C
Confidence 22 34456665 43 357777776554 467789999999999999999994 332221 22222322 7
Q ss_pred ceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccc--cccCCCccchHH
Q 002263 237 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR--DKATSNICTAQA 313 (946)
Q Consensus 237 aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr--e~aTsni~t~~~ 313 (946)
+|++++|+ |+|+ ||..|++++++++++.-+. .+.+.+ ..+ .+.+++ ..+++.-.....
T Consensus 257 aDiv~~S~hK~l~------Gp~GG~i~~~~~~~~~~~~---------~~~~~~-~~l---~~~i~~~~~~g~qggp~~~~ 317 (490)
T 2a7v_A 257 ADIVTTTTHKTLR------GARSGLIFYRKGVKAVDPK---------TGREIP-YTF---EDRINFAVFPSLQGGPHNHA 317 (490)
T ss_dssp CSEEEEESSGGGC------SCSCEEEEEECSEEEEETT---------TEEEEE-CCC---HHHHHHHHTTTTCCSCCHHH
T ss_pred CCEEEECCcccCc------cccchheeeccchhccccc---------ccchhh-HHH---HHHHHHHhcccCCCCchHHH
Confidence 99999998 7674 4555899988753211000 000000 001 011111 111111111233
Q ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcCeEEEecC--C--HHHHHHHHHHcCCeee
Q 002263 314 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA--D--AHAIASAAYKIEMNLR 388 (946)
Q Consensus 314 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~ 388 (946)
+.++.+++ .....+++++..++.++++++|++.|++.| ++++. ....+.+.+.+. + ..++.+.|.++||.+.
T Consensus 318 iaAla~Al--~~~~~~~~~~~~~~~~~na~~L~~~L~~~G-~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~ 394 (490)
T 2a7v_A 318 IAAVAVAL--KQACTPMFREYSLQVLKNARAMADALLERG-YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITAN 394 (490)
T ss_dssp HHHHHHHH--HHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECE
T ss_pred HHHHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEe
Confidence 43443333 222223557888999999999999999998 99874 222334555543 3 6789999999999885
Q ss_pred e---------ecCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 002263 389 V---------VDSNTVTASFDE----TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 ~---------~~~~~lris~~~----~~t~edid~ll~~l~~ 417 (946)
. ..++.||++... ..+++|++++++.|..
T Consensus 395 ~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~ 436 (490)
T 2a7v_A 395 KNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE 436 (490)
T ss_dssp EECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHH
Confidence 3 235789997754 4689999999998863
No 344
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.61 E-value=2.2e-14 Score=164.06 Aligned_cols=272 Identities=17% Similarity=0.129 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHh-hcCCCeEEEEecccc-
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSDLKD- 178 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~-a~~~gi~v~~~~~~~- 178 (946)
..++++.+|++.|.+ .+.++.+|++++++ ++++ .. +||+|++++..|+.+...+... .+..|++++.+|.++
T Consensus 69 ~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~-~~~l-~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~ 142 (400)
T 3nmy_A 69 RFAYERCVAALEGGT--RAFAFASGMAATST-VMEL-LD--AGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDP 142 (400)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESSHHHHHHH-HHTT-SC--TTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSH
T ss_pred HHHHHHHHHHHhCCC--CEEEecCHHHHHHH-HHHH-cC--CCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCH
Confidence 456778999999987 37788888988876 3433 22 7999999999999888877665 556799999998754
Q ss_pred --ccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 179 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 179 --l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
+++ +++++++|++.+| |.+|.+.|+++|+++||++|+++++| +.++.+....|.++|+|+++.|. |.|++|
T Consensus 143 ~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livD-e~~~~~~~~~~~~~g~div~~S~sK~l~g~--- 218 (400)
T 3nmy_A 143 AAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVD-NTFASPMLQRPLSLGADLVVHSATKYLNGH--- 218 (400)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEE-CTTTHHHHCCGGGGTCSEEEEETTTTTTCS---
T ss_pred HHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCcEEEecCccccCCC---
Confidence 555 7889999999998 68999999999999999999999995 34454445566788999999998 877643
Q ss_pred CCCceE-EEEE-chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH
Q 002263 254 GGPHAA-FLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 331 (946)
Q Consensus 254 GGP~~g-~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl 331 (946)
|.+-+| ++.+ ++++.+++.. .++..+ ... .++.+ |+...+-+.+
T Consensus 219 g~~~gG~~vv~~~~~~~~~l~~-------------------------~~~~~g-~~~---~~~~a-----~~~l~~l~~l 264 (400)
T 3nmy_A 219 SDMVGGIAVVGDNAELAEQMAF-------------------------LQNSIG-GVQ---GPFDS-----FLALRGLKTL 264 (400)
T ss_dssp SSCCCEEEEECSCHHHHHHHHH-------------------------HHHHHC-CBC---CHHHH-----HHHHHHHTTH
T ss_pred CCcceeEEEEeCCHHHHHHHHH-------------------------HHHhcC-CCC---CHHHH-----HHHHHhHhHH
Confidence 112235 3443 4445444310 001001 111 11111 1122233446
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEc-CC-----C-----------CcCeEEEecCC----HHHHHHHHHHcCCeee--
Q 002263 332 KTIAQRVHGLAGTFALGLKKLGTVEVQ-GL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEMNLR-- 388 (946)
Q Consensus 332 ~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~-----~-----------~~~~~~i~~~~----~~~v~~~L~~~GI~~~-- 388 (946)
....++..+++.++.+.|++.+.+.-+ .+ + ....+.|.+++ +..+.+.|.-.++.++
T Consensus 265 ~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G 344 (400)
T 3nmy_A 265 PLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLG 344 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCC
Confidence 666777888999999999887435432 11 0 12246777765 2344444432222110
Q ss_pred -------------------------eecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 389 -------------------------VVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 389 -------------------------~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
-+.++.+|+|++..++++.+++|.++|.
T Consensus 345 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 345 GVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp SSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred CCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 0135789999999998888899888886
No 345
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.61 E-value=5.3e-15 Score=172.33 Aligned_cols=163 Identities=20% Similarity=0.214 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH----HHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~----a~~~G~~vv~v~ 596 (946)
...++++++++++|.+.. +..++|+++..+ +++ . ..++++||++...|+.+... +...|++++.++
T Consensus 134 ~~~~l~~~la~~~g~~~~-i~~~sGt~al~~---~l~-~-----~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 203 (464)
T 1ibj_A 134 TRDALESLLAKLDKADRA-FCFTSGMAALSA---VTH-L-----IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN 203 (464)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHHH---HHT-T-----SCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHH---HHH-H-----hCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 467889999999998743 455667655432 222 1 13568899998877655432 457899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
.+ |+++|+++++ ++|++|++++|+ .+|.+. ++++|+++|+++|+++++|+++... .+..|.++|+|++
T Consensus 204 ~~-----d~~~l~~~i~---~~tk~v~l~~p~NptG~v~-~l~~i~~la~~~gi~livDea~~~g--~~~~~~~~~~div 272 (464)
T 1ibj_A 204 TT-----KLDEVAAAIG---PQTKLVWLESPTNPRQQIS-DIRKISEMAHAQGALVLVDNSIMSP--VLSRPLELGADIV 272 (464)
T ss_dssp TT-----SHHHHHHHCC---SSEEEEEECSSCTTTCCCC-CHHHHHHHHHTTTCEEEEECTTTCT--TTCCGGGTTCSEE
T ss_pred CC-----CHHHHHHHhc---cCceEEEEeCCCCCCCEee-cHHHHHHHHHHcCCEEEEECCCccc--ccCChhhcCCEEE
Confidence 74 8999999996 789999999994 689998 7999999999999999999987532 2334666899999
Q ss_pred EeCCCcccccCCCCCCCcceeEEEec-ccCCCC
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFL 707 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~l 707 (946)
+.++||+|+.| +|..+|++++++ ++.+.+
T Consensus 273 ~~S~sK~~~g~---~Gl~~G~l~~~~~~l~~~l 302 (464)
T 1ibj_A 273 MHSATKFIAGH---SDVMAGVLAVKGEKLAKEV 302 (464)
T ss_dssp EEETTTTTTCS---SCCCCEEEEECSHHHHHHH
T ss_pred EECCcccccCC---CCCcEEEEEEChHHHHHHH
Confidence 99999998533 233458998885 555443
No 346
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.61 E-value=1.3e-14 Score=166.53 Aligned_cols=273 Identities=13% Similarity=0.113 Sum_probs=169.1
Q ss_pred HHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHH-HHHHHhhcCCCeEEEEecc------
Q 002263 104 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTI-DICITRADGFDIKVVVSDL------ 176 (946)
Q Consensus 104 ~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~-~~~~~~a~~~gi~v~~~~~------ 176 (946)
+++.+++++|.+..++ ++.+||.++++++.++ .. +||+|+++...|++++ ........+.+++++.++.
T Consensus 83 a~~~~~~~~~~~~~~v-~~~~Gs~a~~~al~~~-~~--~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (425)
T 3ecd_A 83 AIERVKRLFNAGHANV-QPHSGAQANGAVMLAL-AK--PGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTML 158 (425)
T ss_dssp HHHHHHHHHTCSEEEC-CCSSHHHHHHHHHHHH-CC--TTCEEEEECC------------------CEEEEECCCTTTSS
T ss_pred HHHHHHHHhCCCCcee-ecCchHHHHHHHHHHc-cC--CCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCc
Confidence 4478899999887433 5788888877766655 33 8999999999998843 2222111233445555543
Q ss_pred ---ccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCC---CCCCCc-cceEEEecc-cc
Q 002263 177 ---KDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KPPGEL-GADIVVGSA-QR 246 (946)
Q Consensus 177 ---~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l---~~~~~~-GaDi~v~s~-k~ 246 (946)
++|++ +. +++++|++++|++ |...++++|.++|+++|+++++|. .++.+.. ..+..+ .+|++++|. |.
T Consensus 159 ~d~~~l~~~i~~~~~~~v~~~~~~~-~~~~~l~~i~~l~~~~~~~li~De-~~~~g~~~~~~~~~~~~~~di~~~s~sK~ 236 (425)
T 3ecd_A 159 IDYDQVEALAQQHKPSLIIAGFSAY-PRKLDFARFRAIADSVGAKLMVDM-AHIAGVIAAGRHANPVEHAHVVTSTTHKT 236 (425)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSCC-CSCCCHHHHHHHHHHHTCEEEEEC-GGGHHHHHTTSSCCGGGTCSEEEEESSGG
T ss_pred cCHHHHHHHHhhcCCcEEEEccccC-CCcCCHHHHHHHHHHcCCEEEEEC-cChHhhhhcccccCchhcCcEEEecCCcc
Confidence 34555 54 5789999887765 889999999999999999999943 3223221 111111 279999998 77
Q ss_pred ccccCCCCCCceEEEEEch-hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH
Q 002263 247 FGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 325 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~~~-~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~ 325 (946)
|+ ||.+|++.+++ .+.+.+...... + ..++++. +...+..+++ ..
T Consensus 237 l~------g~~~g~~~~~~~~~~~~~~~~~~~------~-----------------~~~~~~~---~~~~a~~~a~--~~ 282 (425)
T 3ecd_A 237 LR------GPRGGFVLTNDEEIAKKINSAVFP------G-----------------LQGGPLM---HVIAGKAVAF--GE 282 (425)
T ss_dssp GC------CCSCEEEEESCHHHHHHHHHHHC----------------------------CCCH---HHHHHHHHHH--HH
T ss_pred cC------CCCcEEEEeCCHHHHHHHHhhhCc------c-----------------ccCCccH---HHHHHHHHHH--HH
Confidence 63 34568888874 454433110000 0 0011121 2233333232 33
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC--C--HHHHHHHHHHcCCeeeee----------
Q 002263 326 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV---------- 390 (946)
Q Consensus 326 ~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~~~---------- 390 (946)
+..++++++.++..++.+++++.|++.| +++... .....+.+.++ + ...+.+.|.++||.++..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~ 361 (425)
T 3ecd_A 283 ALTDDFKTYIDRVLANAQALGDVLKAGG-VDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPT 361 (425)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhCC-CeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCC
Confidence 4457788999999999999999999988 888742 22334455543 2 678889999999988621
Q ss_pred cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 002263 391 DSNTVTASFDETT----TLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ~~~~lris~~~~~----t~edid~ll~~l~~ 417 (946)
.++.+|+++...+ +++|+++++++|+.
T Consensus 362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp TCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 1257999955544 59999999999973
No 347
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.61 E-value=1.5e-14 Score=166.72 Aligned_cols=144 Identities=15% Similarity=0.205 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHH----HHHHcCCEEEEEc
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 596 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~----~a~~~G~~vv~v~ 596 (946)
...++++++++++|.+.. +..++|+++..++++++ . +++++|+++...|+.... .+...|++++.++
T Consensus 83 ~~~~le~~lA~l~g~~~~-v~~~sG~~Ai~~al~al---~-----~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~ 153 (430)
T 3ri6_A 83 TVEDLEQRLKNLTGALGV-LALGSGMAAISTAILTL---A-----RAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD 153 (430)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESCHHHHHHHHHHHH---C-----CTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 356889999999998864 45567776554443332 1 256899999888776655 4567899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCEE
Q 002263 597 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 675 (946)
Q Consensus 597 ~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi~ 675 (946)
.+ |+++|+++++ ++|++|++++| |.+|.+. |+++|+++|+++|+++++|+++. .+.+..|..+|+|++
T Consensus 154 ~~-----d~~~l~~ai~---~~t~~v~~e~p~NptG~~~-dl~~i~~la~~~g~~livD~a~~--~~~~~~~~~~g~div 222 (430)
T 3ri6_A 154 VM-----DSLAVEHACD---ETTKLLFLETISNPQLQVA-DLEALSKVVHAKGIPLVVDTTMT--PPYLLEAKRLGVDIE 222 (430)
T ss_dssp TT-----CHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHTTTCCEEEECTTS--CTTTCCGGGGTCSEE
T ss_pred CC-----CHHHHHHhhC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCc--ccccCChHHcCCEEE
Confidence 75 8999999996 79999999999 5789988 89999999999999999998864 333467778899999
Q ss_pred EeCCCcccc
Q 002263 676 HLNLHKTFC 684 (946)
Q Consensus 676 ~~s~hK~f~ 684 (946)
+.|++|+|+
T Consensus 223 ~~S~sK~l~ 231 (430)
T 3ri6_A 223 VLSSTKFIS 231 (430)
T ss_dssp EEECCCEEE
T ss_pred EECCccccc
Confidence 999999985
No 348
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.61 E-value=1.5e-15 Score=177.17 Aligned_cols=309 Identities=17% Similarity=0.188 Sum_probs=176.9
Q ss_pred HHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHH-HHhcCCCCCCEEEEcCCCCCCC-HHHHHHcCCEEEEE----
Q 002263 522 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY-HKARGDHHRNVCIIPVSAHGTN-PATAAMCGMKIVSV---- 595 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y-~~~~G~~~~~~Ili~~saHg~~-~~~a~~~G~~vv~v---- 595 (946)
..++++++++++|.+.+ +.+++|++++..++.+++.. +..+|..++++|+++ ..|+.. .......|..++..
T Consensus 76 ~~~l~~~la~~~~~~~v-~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~ 153 (467)
T 2oqx_A 76 YYALAESVKNIFGYQYT-IPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQINGCTVRNVYIKE 153 (467)
T ss_dssp HHHHHHHHHHHHCCSEE-EEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHHHTTCEEEECBCTT
T ss_pred hHHHHHHHHHHhCcCcE-EEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchhhhhccCcceeeccccc
Confidence 45788999999998754 44566777776666655532 111142121667765 566432 22344567776543
Q ss_pred --cCC----CCCCCCHHHHHHHHHhcC-CCeEEEEEeCCC-cc-cccc--cCHHHHHHHHHHcCCEEEEeccccc-----
Q 002263 596 --GTD----AKGNINIEELRKAAEANR-DNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMN----- 659 (946)
Q Consensus 596 --~~~----~~g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn-~~-G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~----- 659 (946)
+.+ .++.+|+++|++++++++ ++|++|++++|+ .+ |.+- .++++|+++|++||+++|+|+++..
T Consensus 154 ~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~ 233 (467)
T 2oqx_A 154 AFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYF 233 (467)
T ss_dssp TTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHH
T ss_pred cccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhh
Confidence 222 346789999999998532 479999999885 44 6652 2589999999999999999987643
Q ss_pred ------ccccccCCCc------cCCCEEEeCCCcccccCCCCCCCcceeEEEecc-cCCC---CCCCc-cccCCCCCCCC
Q 002263 660 ------AQVGLTSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPF---LPSHP-VVSTGGIPAPE 722 (946)
Q Consensus 660 ------a~~gl~~pg~------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~---lp~~~-v~~~~d~~~~~ 722 (946)
...+. .+.. .++|++++++||+|+.|. .|+++++++ +++. +.... .+.
T Consensus 234 ~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~s~sK~~g~~~------Gg~~~~~~~~~~~~~~~~~~~~~~~~-------- 298 (467)
T 2oqx_A 234 IKQREAEYKDW-TIEQITRETYKYADMLAMSAKKDAMVPM------GGLLCMKDDSFFDVYTECRTLCVVQE-------- 298 (467)
T ss_dssp HHHHCGGGTTS-CHHHHHHHHGGGCSEEEEESSSTTCCSS------CEEEEECSGGGHHHHHHHHHHHHHTT--------
T ss_pred cccccccccCc-cHHHHhhhhhccCCeEEEecccccCCCC------ceEEEecChhHHHHHHHHHHhhhccC--------
Confidence 12221 1222 247988899999986442 267777655 3222 11000 000
Q ss_pred CCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHH-HHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEecccc
Q 002263 723 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT-EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL 800 (946)
Q Consensus 723 ~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~-~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~~~~~ 800 (946)
+.....+ .......+.... + .+.+. +..++...+++++.+.|++. +.+. + .+.. .+.+++..+
T Consensus 299 ---~~~~~~~----~~~~~~~al~~~--l-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~--~~~~--~~~~~~~~~ 363 (467)
T 2oqx_A 299 ---GFPTYGG----LEGGAMERLAVG--L-YDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-Q--AGGH--AAFVDAGKL 363 (467)
T ss_dssp ---SSCCCCC----CCHHHHHHHHHH--H-HHTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-E--ECSS--CEEEEHHHH
T ss_pred ---Ccccccc----hhhhHHHHHHHh--h-HhhhhHHHHHHHHHHHHHHHHHHHHCCCeee-c--CCce--EEEEechhh
Confidence 0000000 111111111110 1 11111 22233456788999999875 4443 2 1211 244555310
Q ss_pred -c--ccCCCCHHHHHHHH-HHCCcccCCCC-C-----C--------CCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHH
Q 002263 801 -K--NTAGIEPEDVAKRL-MDYGFHGPTMS-W-----P--------VPGTLMIEPTES-ESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 801 -~--~~~g~~~~~i~~~L-~~~Gi~~~~~~-~-----p--------~~~~lri~~t~~-~t~~eid~~~~aL~~i~~e~~ 861 (946)
. .....+..++.++| .++|+.+...+ + | ..+.+|++++.. +|++||+++++.|++++++.+
T Consensus 364 ~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 364 LPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp STTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 0 00011156678999 88999863211 0 1 127899999988 999999999999999887654
Q ss_pred H
Q 002263 862 Q 862 (946)
Q Consensus 862 ~ 862 (946)
.
T Consensus 444 ~ 444 (467)
T 2oqx_A 444 N 444 (467)
T ss_dssp G
T ss_pred h
Confidence 4
No 349
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.61 E-value=9e-15 Score=170.40 Aligned_cols=162 Identities=19% Similarity=0.204 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+++++|.+ ++.++.+|+.++.+++. . +. +||+||++...|+++...+...++..|++++.++..
T Consensus 134 ~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~-~-~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~ 207 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH-L-IK--NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKL 207 (464)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT-T-SC--TTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSH
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH-H-hC--CCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCH
Confidence 3556778999999986 57778888876654432 1 23 899999999999999888776677789999998764
Q ss_pred -cccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCccceEEEecc-ccccccCCC
Q 002263 178 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 253 (946)
Q Consensus 178 -~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~GaDi~v~s~-k~lg~P~~~ 253 (946)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+....+.++|+|+++.|. |+|++|.|
T Consensus 208 ~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livD-ea~~~g~~~~~~~~~~div~~S~sK~~~g~~G- 285 (464)
T 1ibj_A 208 DEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVD-NSIMSPVLSRPLELGADIVMHSATKFIAGHSD- 285 (464)
T ss_dssp HHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEE-CTTTCTTTCCGGGTTCSEEEEETTTTTTCSSC-
T ss_pred HHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCEEEEECCcccccCCCC-
Confidence 4555 7889999999998 67999999999999999999999994 34444444445568999999998 77765422
Q ss_pred CCCceEEEEEch-hhhhcC
Q 002263 254 GGPHAAFLATSQ-EYKRMM 271 (946)
Q Consensus 254 GGP~~g~l~~~~-~~~~~l 271 (946)
--+|++++++ ++.+.+
T Consensus 286 --l~~G~l~~~~~~l~~~l 302 (464)
T 1ibj_A 286 --VMAGVLAVKGEKLAKEV 302 (464)
T ss_dssp --CCCEEEEECSHHHHHHH
T ss_pred --CcEEEEEEChHHHHHHH
Confidence 1248999885 665544
No 350
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.61 E-value=5.2e-15 Score=166.09 Aligned_cols=292 Identities=13% Similarity=0.072 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCH---HHHHHcCCEEEEEcC
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP---ATAAMCGMKIVSVGT 597 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~---~~a~~~G~~vv~v~~ 597 (946)
...++++++++++|.+.. +..++|++++..++.++. .+| .+..|+++...|.... ..+...|.+++.++.
T Consensus 49 ~~~~l~~~la~~~~~~~~-i~~~~g~~a~~~a~~~~~----~~g--~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (359)
T 3pj0_A 49 VIEDFETKIAKILGKQSA-VFFPSGTMAQQIALRIWA----DRK--ENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT 121 (359)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESCHHHHHHHHHHHHH----HHH--TCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHH----hcC--CCcEEEEeccceeeehhcchHHHhcCceEEecCC
Confidence 356888999999999865 444677766644444332 222 1224666655543221 123567999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccc-cccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccc-CCC--c
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STH-GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-SPG--Y 669 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~-G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~-~gl~-~pg--~ 669 (946)
+++.+|+++|+++ . +++++|++++| |++ |.+. +++++|+++|++||+++++|+++.... .... .+. .
T Consensus 122 -~~~~~d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 196 (359)
T 3pj0_A 122 -ANQLLTIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC 196 (359)
T ss_dssp -TTSCCCHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH
T ss_pred -cCCCcCHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh
Confidence 5688999999988 4 78999999999 455 6764 246666999999999999998764211 1111 111 2
Q ss_pred cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHH
Q 002263 670 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 749 (946)
Q Consensus 670 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~ 749 (946)
.++|+++.++||+|+.| +.|+++.++++.+.+.... . ...+++.. ....++++.+.+.
T Consensus 197 ~~~d~~~~s~sK~~~~~------~gg~~~~~~~l~~~~~~~~--~----------~~~~~~~~----~~~~~~a~~~~l~ 254 (359)
T 3pj0_A 197 ALFDSVYVSFYKGIGGI------AGAILAGNDDFVQEAKIWK--R----------RYGGDLIS----LYPYILSADYYFE 254 (359)
T ss_dssp TTCSEEEEESSSTTCCS------SCEEEEECHHHHHHHHHHH--H----------HTTCCCSC----CHHHHHHHHHHHH
T ss_pred ccCCEEEEeccccCCCc------ceEEEECCHHHHHHHHHHH--H----------HhCCCcch----hHHHHHHHHHHHH
Confidence 47899999999998533 3377887876665432100 0 00001111 1111222223332
Q ss_pred HHcHhhHHHHHHHHHHHHHHHHHHHhccCCeee-ccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-C
Q 002263 750 MMGSKGLTEASKIAILNANYMAKRLEKHYPILF-RGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W 827 (946)
Q Consensus 750 ~lG~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~-~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~-~ 827 (946)
.. + +..++...+++++.+.|+++..+.+ ..+.+ .+-+.++++.. .+.+..++.++|.++||.+.... |
T Consensus 255 ~~----~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~~l~~~GV~v~~g~~~ 324 (359)
T 3pj0_A 255 KR----I-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPV--SNMFHVYFENS---ADEIGAILTKIQDETGVGISGYLQE 324 (359)
T ss_dssp HH----G-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCS--SSEEEEEESSC---HHHHHHHHHHHHHHHCEECCSCCEE
T ss_pred HH----H-HHhHHHHHHHHHHHHHHhhCCCceeeccCCc--ceEEEEEecCc---cchhHHHHHHHHHhcCcEecCCccc
Confidence 22 1 2233456788899999987533322 11111 12244555410 01245789999999999875432 2
Q ss_pred --CCCCEEEEEcCCC---CCHHHHHHHHHHHHHH
Q 002263 828 --PVPGTLMIEPTES---ESKEELDRYCDALISI 856 (946)
Q Consensus 828 --p~~~~lri~~t~~---~t~~eid~~~~aL~~i 856 (946)
|..+.+|+++... .+.+++++.++.|.++
T Consensus 325 ~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 325 KSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 1235688877643 4677777777776553
No 351
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.61 E-value=9e-14 Score=158.36 Aligned_cols=272 Identities=12% Similarity=0.097 Sum_probs=175.5
Q ss_pred HHHHHHHHHhC--CCCcceEEcccHHHHHHHHHHHhccccCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 103 NFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKK-KTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 103 e~q~~la~L~g--~~~~~~sl~~~~Ta~~ea~~la~~~~~~~g-d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...+.+.+..| .++.++.+++|+|.+++.++.++. . +| |+|+++...|+.+...++ ..|++++.++.+
T Consensus 84 ~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~-~--~g~d~vl~~~p~~~~~~~~~~----~~g~~~~~v~~~~~ 156 (398)
T 3ele_A 84 AIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALT-S--DAYDEFITIAPYFPEYKVFVN----AAGARLVEVPADTE 156 (398)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-C--STTCEEEEESSCCTHHHHHHH----HTTCEEEEECCCTT
T ss_pred HHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHc-C--CCCCEEEEeCCCchhhHHHHH----HcCCEEEEEecCCc
Confidence 33345555556 466789999999988887766652 2 78 999999999999887764 358888887653
Q ss_pred -------cccc-cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHh------CCcEEEEEecCcccc---C--CCC-CC
Q 002263 178 -------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHA------NGVKVVMATDLLALT---I--LKP-PG 233 (946)
Q Consensus 178 -------~l~~-i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~------~gal~~v~a~~~al~---~--l~~-~~ 233 (946)
+|++ +++++++|++++| |.+|.+.+ +++|+++|++ +|+++++|. ..+.. . ... ..
T Consensus 157 ~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~ 235 (398)
T 3ele_A 157 HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADE-PYREIVYDGIKVPFVTK 235 (398)
T ss_dssp TSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEC-TTTTCBCTTCCCCCGGG
T ss_pred CCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEec-cccccccCCCCcCChHh
Confidence 3445 6778999999988 67999887 7788899999 999999953 22221 1 111 13
Q ss_pred CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchH
Q 002263 234 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 312 (946)
Q Consensus 234 ~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~ 312 (946)
.++.+++++|. |.|+. .|..+|++++++++.+... +. + .+ +...+..++.+. +.
T Consensus 236 ~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~--~~----~---------~~----~~~~~~~~~~~~--~~ 290 (398)
T 3ele_A 236 YYDNTLVCYSYSKSLSL----PGERIGYVLVPDEVYDKAE--LY----A---------AV----CGAGRALGYVCA--PS 290 (398)
T ss_dssp TCSSEEEEEESTTTSSC----TTTCCEEEECCTTSTTHHH--HH----H---------HH----HHHHHHTTCCCS--CH
T ss_pred hcCCeEEEEehhhcCCC----ccceeEEEEEcchhhhHHH--HH----H---------HH----HHHhhhccccCC--CH
Confidence 45677888887 87753 2456899998876543110 00 0 00 000111112222 11
Q ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHcCCeeeee
Q 002263 313 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 313 ~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~GI~~~~~ 390 (946)
+ +..++. ..+.... ..++..++.+++.+.|+++| +++......--+.+..++ +.++.+.|.++||.++.-
T Consensus 291 -~-~~~a~~--~~l~~~~---~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g 362 (398)
T 3ele_A 291 -L-FQKMIV--KCQGATG---DINAYKENRDLLYEGLTRIG-YHCFKPDGAFYMFVKALEDDSNAFCEKAKEEDVLIVAA 362 (398)
T ss_dssp -H-HHHHHT--TCTTCCC---CHHHHHHHHHHHHHHHHHHT-CCEECCSBSSEEEEECSSSCHHHHHHHHHTTTEECEES
T ss_pred -H-HHHHHH--HHhcCHH---HHHHHHHHHHHHHHHHHHcC-CeecCCCeeEEEEEEcCCCCHHHHHHHHHHCCEEEeCc
Confidence 1 111111 1221111 34566777888999998877 776542211124455553 788999999999988653
Q ss_pred c----CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 D----SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ~----~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. ++.+|+|++ +++++|+++++.|..
T Consensus 363 ~~~~~~~~iRis~~--~~~e~i~~~l~~l~~ 391 (398)
T 3ele_A 363 DGFGCPGWVRISYC--VDREMIKHSMPAFEK 391 (398)
T ss_dssp GGGTCTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred cccCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 2 579999996 699999999999863
No 352
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.60 E-value=1.8e-13 Score=157.91 Aligned_cols=301 Identities=17% Similarity=0.155 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHhhCCCcc-cccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCHHHHHHcC--------
Q 002263 520 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCG-------- 589 (946)
Q Consensus 520 ~~~~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~~~a~~~G-------- 589 (946)
+...++.+.+++++|.+.. .+..++|++++++++.+++.+ . ++++||+++ +.||....+....+
T Consensus 85 ~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~---~---~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLV---T---GKYEIVGFAQSWHGMTGAAASATYSAGRKGVG 158 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHH---H---TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSC
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh---h---CCCeEEEECCCcCCCChhHHhhcCCccccccC
Confidence 3456788899999986532 355677887776665555433 2 246677654 67887766554321
Q ss_pred ---CEEEEEcCCCC------------CCCCHHHHHHHHHhcC-CCeEEEEEeCC-Cccccccc---CHHHHHHHHHHcCC
Q 002263 590 ---MKIVSVGTDAK------------GNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGG 649 (946)
Q Consensus 590 ---~~vv~v~~~~~------------g~~D~e~L~~~i~~~~-~~t~~vvvt~P-n~~G~~~~---~i~~I~~ia~~~g~ 649 (946)
..++.++++.. +.+|+++|+++++++. +++++|+++.. |.+|++.+ .+++|+++|++||+
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~ 238 (433)
T 1zod_A 159 PAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGM 238 (433)
T ss_dssp CCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTC
T ss_pred CCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCC
Confidence 13444443211 1246999999997533 46776666432 45786541 29999999999999
Q ss_pred EEEEecccccccccccCCC--------ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCC
Q 002263 650 QVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 721 (946)
Q Consensus 650 ll~vD~a~~~a~~gl~~pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~ 721 (946)
++++|+++. ++.+.+ ....|++++ .|+|+ +|.++|++++++++.+.+.....
T Consensus 239 ~li~DEv~~----~~g~~g~~~~~~~~~~~~di~s~--sK~~~-----~G~~ig~~~~~~~~~~~~~~~~~--------- 298 (433)
T 1zod_A 239 LLILDEAQT----GVGRTGTMFACQRDGVTPDILTL--SKTLG-----AGLPLAAIVTSAAIEERAHELGY--------- 298 (433)
T ss_dssp EEEEECTTT----TTTTTSSSSTHHHHTCCCSEEEE--CHHHH-----TTSSCEEEEECHHHHHHHHHTTC---------
T ss_pred EEEEecccc----CCCcCchHhHHhhcCCCCCEEEe--ccccc-----CCCCeeEEEEhHHHHHhhccCCC---------
Confidence 999999864 222221 124688765 49985 35779999998876654321000
Q ss_pred CCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEe
Q 002263 722 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVD 796 (946)
Q Consensus 722 ~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~ 796 (946)
...+..+. +...++++.+.+..+..+++. ++...+.+++.++|++. +... .++ .+.+ +.++
T Consensus 299 ---~~~~t~~~----~~~~~~a~~aal~~~~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~---~~i~ 364 (433)
T 1zod_A 299 ---LFYTTHVS----DPLPAAVGLRVLDVVQRDGLV---ARANVMGDRLRRGLLDLMERFDCIGDVRG-RGLL---LGVE 364 (433)
T ss_dssp ---CCCCTTTT----CHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTE---EEEE
T ss_pred ---CCCCCCCc----CHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHhCCCeEEEEE-EEEE---EEEE
Confidence 00011121 233334445555555445443 34446677888888663 2321 122 2333 2344
Q ss_pred ccccc---ccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 797 LRGLK---NTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 797 ~~~~~---~~~g~~~~~i~~~L~~~Gi~~~~~~-~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+.... ........++.++|.++|+.+.... |...+.+||+++...|++|++++++.|+++++++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 365 IVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp EEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 32100 0001236789999999999864322 2223789999999999999999999999887653
No 353
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.60 E-value=1.4e-14 Score=167.09 Aligned_cols=256 Identities=16% Similarity=0.041 Sum_probs=165.0
Q ss_pred HHHHHHHHHHhhCCCccc--ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCCCHHHH----------HHc
Q 002263 522 FNNLGEWLCTITGFDSFS--LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATA----------AMC 588 (946)
Q Consensus 522 ~~el~~~la~l~G~~~~~--l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~-saHg~~~~~a----------~~~ 588 (946)
..++++++++++|.+... ++.++|++++.+++.++. .++++||++. ..|++....+ ...
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~--------~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~ 138 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGIL--------RPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEY 138 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTC--------CTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGG
T ss_pred HHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhC--------CCCCEEEEeCCCCchhHHHHHhhcccccchHHHc
Confidence 567889999999998643 345678766644443321 2568899987 7787766544 347
Q ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeC----CC-cccccccCHHHHHHHHHH--cCCEEEEeccccccc
Q 002263 589 GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY----PS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ 661 (946)
Q Consensus 589 G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~----Pn-~~G~~~~~i~~I~~ia~~--~g~ll~vD~a~~~a~ 661 (946)
|++++.++.++++.+|+++|+++++ ++|++|++++ |+ ..|..+ ++++|+++|++ +|+++++|+++....
T Consensus 139 G~~~~~v~~~~~~~~d~e~l~~~l~---~~tk~V~i~~sp~np~~~~~~~~-~l~~i~~la~~~~~~~~livDea~~~~~ 214 (431)
T 3ht4_A 139 NIGYNAVPLTEGGLVDFEAVAAAIH---SNTKMIGIQRSKGYATRPSFTIS-QIKEMIAFVKEIKPDVVVFVDNCYGEFI 214 (431)
T ss_dssp TCEEEECCBCTTSSBCHHHHHHHCC---TTEEEEEEECSCTTSSSCCCCHH-HHHHHHHHHHHHCTTCEEEEECTTCTTS
T ss_pred CCEEEEeCCCCCCCcCHHHHHhhcC---CCCeEEEEECCCCCCCCCcCCHH-HHHHHHHHHHhhCCCCEEEEeCCChhhc
Confidence 9999999998899999999999996 7899999996 42 466666 79999999999 999999998764221
Q ss_pred ccccCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 662 VGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 662 ~gl~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
. ...|..+|+|+++.++||+|+. +++|..|++++++++.+.+..... ....+...+..++....
T Consensus 215 ~-~~~~~~~g~Di~~~S~sK~lgg---~~~~~GG~v~~~~~li~~l~~~~~-----------~~~~g~~~~~~~~~~~~- 278 (431)
T 3ht4_A 215 E-EQEPCHVGADLMAGSLIKNPGG---GIVKTGGYIVGKEQYVEACAYRLT-----------SPGIGAEAGASLYSLQE- 278 (431)
T ss_dssp S-SCCGGGTTCSEEEEETTSGGGT---TTCSSCEEEEECHHHHHHHHHHHS-----------CTTTTTSCSCCCSCSHH-
T ss_pred c-CCCccccCCeEEEcCccccCCC---CCCCceEEEEecHHHHHHHHHHhc-----------cCCcccccCccHHHHHH-
Confidence 1 1356678999999999999852 123544999998876554321100 00000000000111111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceee--eEEEecccccccCCCCHHHHHHHHHHC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAH--EFIVDLRGLKNTAGIEPEDVAKRLMDY 818 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~--e~v~~~~~~~~~~g~~~~~i~~~L~~~ 818 (946)
+.. +-+.+..+.++...++.++++.|++. +.+ ++++ +...+ .+.+.+.. .....++++.|.+.
T Consensus 279 --~~~-----~l~~~~~~~~~~~~~a~~l~~~L~~~g~~v-~p~~-~~~~~~li~~i~l~~-----~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 279 --MYQ-----GFFLAPHVAGQALKGAIFTAAFLEKLGMNT-SPAW-NAPRTDLIQSVQFDD-----KDRMIAFCQAIQYA 344 (431)
T ss_dssp --HHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHTCCE-ESCT-TSCCSSSCCEEECCC-----HHHHHHHHHHHHHT
T ss_pred --HHh-----HhhhHHHHHHHHHHHHHHHHHHHHhCcCEe-cCCC-CCCCccEEEEEEeCC-----HHHHHHHHHHHHhc
Confidence 111 11223455667778999999999886 665 4432 11111 12233321 12456788888876
Q ss_pred C
Q 002263 819 G 819 (946)
Q Consensus 819 G 819 (946)
.
T Consensus 345 ~ 345 (431)
T 3ht4_A 345 S 345 (431)
T ss_dssp S
T ss_pred C
Confidence 4
No 354
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.60 E-value=1.5e-14 Score=163.36 Aligned_cols=270 Identities=11% Similarity=0.075 Sum_probs=176.6
Q ss_pred HHHHHHHHhC------CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-
Q 002263 104 FQTMIADLTG------LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 176 (946)
Q Consensus 104 ~q~~la~L~g------~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~- 176 (946)
+++.++++++ .++.++.+++|+|.++++++.++. . +||+|+++...|+++...++. .|.+++.++.
T Consensus 63 lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~-~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~ 135 (377)
T 3fdb_A 63 LSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFT-P--AQSKVIVPTPAYPPFFHLLSA----TQREGIFIDAT 135 (377)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-C--TTCCEEEEESCCTHHHHHHHH----HTCCEEEEECT
T ss_pred HHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhc-C--CCCEEEEcCCCcHhHHHHHHH----cCCEEEEccCC
Confidence 4456666666 667789999999988887766652 2 789999999999998877654 3666666644
Q ss_pred -----ccccc-cCCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCC-C-----CCC---Cccc
Q 002263 177 -----KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL-K-----PPG---ELGA 237 (946)
Q Consensus 177 -----~~l~~-i~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l-~-----~~~---~~Ga 237 (946)
+++++ +++++++|++.+| |.+|.+. ++++|+++|+++|++++++. ..+.... . +.. ..+.
T Consensus 136 ~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~ 214 (377)
T 3fdb_A 136 GGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDE-IHAPLVFDGQHTVAAGVSDTAASV 214 (377)
T ss_dssp TSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEEC-TTGGGBSSSCCCCGGGSCHHHHHH
T ss_pred CCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEc-ccchhhcCCCCCcccHHHccCCCc
Confidence 45666 6677899999998 6799886 57888888999999999953 3222111 1 111 1345
Q ss_pred eEEEecc-ccccccCCCCCCceEEEEE-chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 238 DIVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 238 Di~v~s~-k~lg~P~~~GGP~~g~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
+++++|. |.|+.| |..+|++.+ ++++.+.+.. ... ....+.|. ....
T Consensus 215 ~i~~~s~sK~~g~~----G~r~G~~~~~~~~~~~~~~~----------~~~--------------~~~~~~~~---~~~~ 263 (377)
T 3fdb_A 215 CITITAPSKAWNIA----GLKCAQIIFSNPSDAEHWQQ----------LSP--------------VIKDGAST---LGLI 263 (377)
T ss_dssp EEEEECSTTTTTCG----GGCCEEEECCSHHHHHHHHH----------SCH--------------HHHCCCCH---HHHH
T ss_pred EEEEEeChHhccCc----chhheEEEeCCHHHHHHHHH----------HHH--------------hhcCCCCH---HHHH
Confidence 6888887 877532 334687776 5566554410 000 00011111 1222
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCCCCcCeEEEecCC---HHHHHHHHHHc-CCeeeee
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKI-EMNLRVV 390 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~-GI~~~~~ 390 (946)
+..+++ ..+.+.++++.++..++.+++.+.|++ ++++++......-.+.++++. ..++.+.|.++ ||.++.-
T Consensus 264 a~~~~l---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 340 (377)
T 3fdb_A 264 AAEAAY---RYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDG 340 (377)
T ss_dssp HHHHHH---HHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEG
T ss_pred HHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCC
Confidence 222222 234566788899999999999999998 433887643211122344442 34677777665 9988642
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 ------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++.+|+|++ ++++++++.++.|..
T Consensus 341 ~~~~~~~~~~~Ris~~--~~~e~i~~~l~~l~~ 371 (377)
T 3fdb_A 341 AWFGEDGTGFCRLNFA--TSREVLEEAIDRMAK 371 (377)
T ss_dssp GGGCGGGTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred hhccCCCCCEEEEEeC--CCHHHHHHHHHHHHH
Confidence 2588999988 489999999998863
No 355
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.60 E-value=5.1e-14 Score=162.08 Aligned_cols=307 Identities=14% Similarity=0.092 Sum_probs=198.7
Q ss_pred CCCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHHHHhC--CCCcceEEcccHHHHHHHHHHHh
Q 002263 60 GMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g--~~~~~~sl~~~~Ta~~ea~~la~ 136 (946)
+.|..+...|+.+.+.+.+... ....|+++.. +...++.+.+++.+| .++.++.+++|++.++++++.++
T Consensus 67 ~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~-------~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~ 139 (421)
T 3l8a_A 67 WVADMDFLPVPEIKEAIINYGREHIFGYNYFND-------DLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAF 139 (421)
T ss_dssp CSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCCH-------HHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCH-------HHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHh
Confidence 3444444566666555543211 1223444432 333455678888888 56678989999998888776655
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----------ccccc-cC-CCEeEEEEEcC-CCceee--
Q 002263 137 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KS-GDVCGVLVQYP-GTEGEV-- 200 (946)
Q Consensus 137 ~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-----------~~l~~-i~-~~t~~v~v~~p-n~~G~i-- 200 (946)
. . +||+|+++...|+.+...++. .|.+++.+++ ++|++ +. +++++|++.+| |.+|.+
T Consensus 140 ~-~--~gd~Vi~~~~~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 140 S-E--KGDAVLINSPVYYPFARTIRL----NDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp S-C--TEEEEEEEESCCHHHHHHHHH----TTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred c-C--CCCEEEECCCCcHHHHHHHHH----CCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence 2 2 789999999999998887653 4777776553 34555 65 78999999998 779988
Q ss_pred -cchHHHHHHHHhCCcEEEEEecCccccCC-----C-----CCCCccceEEEecc-ccccccCCCCCCceEEEEEc-hhh
Q 002263 201 -LDYGDFIKNAHANGVKVVMATDLLALTIL-----K-----PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEY 267 (946)
Q Consensus 201 -~di~~i~~~a~~~gal~~v~a~~~al~~l-----~-----~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~-~~~ 267 (946)
+++++|.++|+++|+++++|. ..+.... . .+...+.++++.|. |.|+.| |-.+|++.++ +++
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----G~~~G~~~~~~~~l 287 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDE-IHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIA----GTKNSFAIIQNESL 287 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEC-TTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCG----GGCCEEEECCSHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEc-cccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCc----hhheEeEEcCCHHH
Confidence 789999999999999999943 2221110 0 11224666888887 888532 3346888887 666
Q ss_pred hhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHH
Q 002263 268 KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAL 347 (946)
Q Consensus 268 ~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~ 347 (946)
.+.+.... ++ ....+.|. .+..+..+++ . .+.+.++++.++..++.++|++
T Consensus 288 ~~~~~~~~---------------------~~--~~~~~~n~---~~~~a~~aal--~-~~~~~~~~~~~~~~~~~~~l~~ 338 (421)
T 3l8a_A 288 RRKFQYRQ---------------------LA--NNQHEVPT---VGMIATQAAF--Q-YGKPWLEELKTVIEGNIKLVIK 338 (421)
T ss_dssp HHHHHHHH---------------------HH--TTCSCCCH---HHHHHHHHHH--H-HCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---------------------Hh--cccCCCCH---HHHHHHHHHH--h-ccHHHHHHHHHHHHHHHHHHHH
Confidence 65541100 00 00112222 2222222222 2 3566788999999999999999
Q ss_pred HHhcC-CCEEEcCCCCcCeEEEecC----CHHHHHHHHHH-cCCeeee------ecCCeEEEEeccCCCHHHHHHHHHHH
Q 002263 348 GLKKL-GTVEVQGLPFFDTVKVKCA----DAHAIASAAYK-IEMNLRV------VDSNTVTASFDETTTLEDVDKLFIVF 415 (946)
Q Consensus 348 ~L~~~-g~~~~~~~~~~~~~~i~~~----~~~~v~~~L~~-~GI~~~~------~~~~~lris~~~~~t~edid~ll~~l 415 (946)
.|+++ | +++......-.+.+.++ ...++.++|.+ +||.+.. ..++.+|+++. +++++|+++++.|
T Consensus 339 ~L~~~~~-i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l 415 (421)
T 3l8a_A 339 ELEAKTK-IKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRI 415 (421)
T ss_dssp HHHHHCS-CEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHH
T ss_pred HHHhCCC-ceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHH
Confidence 99886 5 77764221111224432 26688899975 5998864 23588999988 6899999999998
Q ss_pred hC
Q 002263 416 AG 417 (946)
Q Consensus 416 ~~ 417 (946)
..
T Consensus 416 ~~ 417 (421)
T 3l8a_A 416 IS 417 (421)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 356
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.60 E-value=2.2e-14 Score=163.14 Aligned_cols=275 Identities=13% Similarity=0.112 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc----c---CCCCEEEEcCCCCHHHHHHHHHhhcC------
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ----K---GKKKTFIIASNCHPQTIDICITRADG------ 166 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~----~---~~gd~vvv~~~~Hps~~~~~~~~a~~------ 166 (946)
...++++.+++++|. .++.++++||.++++++.+.+.. + .++++|++....|+.....+......
T Consensus 79 ~~~~l~~~la~~~g~--~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (392)
T 3ruy_A 79 QLGPWYEKVAKLTNK--EMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRG 156 (392)
T ss_dssp THHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTT
T ss_pred HHHHHHHHHHHhcCC--CEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccc
Confidence 345677899999994 45889999998888776543211 0 13679999888886554443332111
Q ss_pred ---CCeEEEEe---ccccccc-cCCCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCc-cccCCCC--
Q 002263 167 ---FDIKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLL-ALTILKP-- 231 (946)
Q Consensus 167 ---~gi~v~~~---~~~~l~~-i~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~-al~~l~~-- 231 (946)
....+..+ |+++|++ +++++++|++++| |.+|.+.| +++|.++|+++|+++++|. .. .++....
T Consensus 157 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De-~~~~~~~~g~~~ 235 (392)
T 3ruy_A 157 FGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADE-IQTGLGRTGKVF 235 (392)
T ss_dssp CCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEEC-TTTTTTTTSSSS
T ss_pred cCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEee-chhCCCccccch
Confidence 01123344 4466777 7889999999887 77999998 9999999999999999953 22 2322111
Q ss_pred -CC--CccceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 232 -PG--ELGADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 232 -~~--~~GaDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
.. ....|+++.| |.++ || ..+|++++++++.+.+..... ..|.+
T Consensus 236 ~~~~~~~~~d~~~~S-K~l~-----gG~~~~G~~~~~~~~~~~~~~~~~--------------------------~~~~~ 283 (392)
T 3ruy_A 236 ACDWDNVTPDMYILG-KALG-----GGVFPISCAAANRDILGVFEPGSH--------------------------GSTFG 283 (392)
T ss_dssp GGGGGTCCCSEEEEC-GGGG-----TTTSCCEEEEECHHHHTTCCTTSS--------------------------CCSST
T ss_pred hhhccCCCCCEEEEc-hhhh-----CChhhhEEEEECHHHHhhhccCCc--------------------------CCCCC
Confidence 11 2346887664 7663 23 447899999888776632100 01111
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC--CEEEcCCCCcCeEEEecCC-HHHHHHHHHHcC
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG--TVEVQGLPFFDTVKVKCAD-AHAIASAAYKIE 384 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g--~~~~~~~~~~~~~~i~~~~-~~~v~~~L~~~G 384 (946)
. +.....+..+++ ..+.. +++.++..++.+++++.|++++ .+.... +....+.+.+++ +.++.+.|.++|
T Consensus 284 ~-~~~~~~a~~~~l--~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~~~~~~~~~~~~~l~~~l~~~g 356 (392)
T 3ruy_A 284 G-NPLACAVSIAAL--EVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEVR-GKGLFIGIELNEPARPYCEQLKAAG 356 (392)
T ss_dssp T-CHHHHHHHHHHH--HHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEEE-EETTEEEEEESSCSHHHHHHHHTTT
T ss_pred C-CHHHHHHHHHHH--HHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEEE-eeeeEEEEEEcchHHHHHHHHHHCC
Confidence 1 111222222222 32211 5677788889999999999874 122221 111224444443 778999999999
Q ss_pred CeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 385 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 385 I~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
|.++...++.+|++++..+|++|+++++++|+
T Consensus 357 i~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 388 (392)
T 3ruy_A 357 LLCKETHENVIRIAPPLVISEEDLEWAFQKIK 388 (392)
T ss_dssp EECCCBTTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cEEecCCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 99987667899999999999999999999986
No 357
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.60 E-value=9.9e-15 Score=167.26 Aligned_cols=275 Identities=11% Similarity=0.065 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEE------
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVV------ 173 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~-~a~~~gi~v~~------ 173 (946)
...+++.+++++|++.+++ ++.+||.+.++++.++. . +||+|+++...|+++...... ...+.++....
T Consensus 78 ~~~~~~~la~~~~~~~~~v-~~~sGs~a~~~a~~~~~-~--~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (420)
T 3gbx_A 78 EQLAIDRAKELFGADYANV-QPHSGSQANFAVYTALL-Q--PGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDES 153 (420)
T ss_dssp HHHHHHHHHHHHTCSEEEC-CCSSHHHHHHHHHHHHC-C--TTCEEEEEEEC------------CHHHHSEEEEEEECTT
T ss_pred HHHHHHHHHHHhCCCCcee-EecCcHHHHHHHHHHhc-C--CCCEEEecchhhcceeccchhhhhcccceeEEeccCCcc
Confidence 3345689999999987655 35666777776665542 3 899999999999885422211 01112233332
Q ss_pred --eccccccc-cCC-CEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCC-----CCCCCccceEEEecc
Q 002263 174 --SDLKDIDY-KSG-DVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA 244 (946)
Q Consensus 174 --~~~~~l~~-i~~-~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~~GaDi~v~s~ 244 (946)
+|+++|++ +++ ++++|++++||+ |.+.|+++|.++|+++|+++++|. .++.+.. ..+.. .+|++++|.
T Consensus 154 ~~~d~~~l~~~i~~~~~~~v~~~~~~~-~~~~~l~~l~~l~~~~~~~li~De-~~~~~~~~~~~~~~~~~-~~di~~~s~ 230 (420)
T 3gbx_A 154 GKIDYDEMAKLAKEHKPKMIIGGFSAY-SGVVDWAKMREIADSIGAYLFVDM-AHVAGLIAAGVYPNPVP-HAHVVTTTT 230 (420)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEECCTTC-CSCCCHHHHHHHHHHTTCEEEEEC-TTTHHHHHTTSSCCSTT-TSSEEEEES
T ss_pred CCcCHHHHHHHHHhcCCeEEEEecCcc-CCccCHHHHHHHHHHcCCEEEEEC-CcchhceecccCCcccc-cCCEEEeec
Confidence 34456666 544 588998888765 678899999999999999999943 3233221 11112 489999998
Q ss_pred -ccccccCCCCCCceEEEEEch---hhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 245 -QRFGVPMGYGGPHAAFLATSQ---EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 245 -k~lg~P~~~GGP~~g~l~~~~---~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
|.|++ |..|++.+++ ++.+.+...... + ..++++. ....++.++
T Consensus 231 sK~~~g------~~gg~~~~~~~~~~~~~~~~~~~~~------~-----------------~~~~~~~---~~~~a~~~a 278 (420)
T 3gbx_A 231 HKTLAG------PRGGLILAKGGDEELYKKLNSAVFP------S-----------------AQGGPLM---HVIAGKAVA 278 (420)
T ss_dssp SGGGCS------CSCEEEEESSCCHHHHHHHHHHHC---------------------------CCCCH---HHHHHHHHH
T ss_pred ccCCCC------CCceEEEEcCCcHHHHHHhhhhcCC------C-----------------CCCCcch---hHHHHHHHH
Confidence 77743 4348998887 555443110000 0 0011121 222233222
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCcCeEEEecC--C--HHHHHHHHHHcCCeeee------
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRV------ 389 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~~------ 389 (946)
+ .....++++++.++..++.+++++.|++.| +++... .....+.+.+. + ...+.+.|.++||.+..
T Consensus 279 ~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~ 355 (420)
T 3gbx_A 279 L--KEAMEPEFKVYQQQVAKNAKAMVEVFLNRG-YKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPND 355 (420)
T ss_dssp H--HHTTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTC
T ss_pred H--HHHHhHhHHHHHHHHHHHHHHHHHHHHhcC-CeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCC
Confidence 2 334457788999999999999999999988 888642 22333444432 2 67888999999998865
Q ss_pred ----ecCCeEEEEeccC----CCHHHHHHHHHHHhC
Q 002263 390 ----VDSNTVTASFDET----TTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ----~~~~~lris~~~~----~t~edid~ll~~l~~ 417 (946)
..+..+|+++... .+++|+++++++|..
T Consensus 356 ~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~ 391 (420)
T 3gbx_A 356 PKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCD 391 (420)
T ss_dssp SSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccccCCCcceEEecchhcccCCCHHHHHHHHHHHHH
Confidence 1234599998765 458999999999863
No 358
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.60 E-value=4.9e-14 Score=162.41 Aligned_cols=273 Identities=14% Similarity=0.149 Sum_probs=178.1
Q ss_pred HHHHHHHHHHhC--------CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 102 LNFQTMIADLTG--------LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 102 ~e~q~~la~L~g--------~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
.++++.+|+++| .++.++.+++|+|.++++++.++. . +||+|++++..|+++...+ +...|++++.
T Consensus 86 ~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~-~--~gd~Vl~~~p~y~~~~~~~---~~~~g~~~~~ 159 (428)
T 1iay_A 86 PEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA-D--PGDAFLVPSPYYPAFNRDL---RWRTGVQLIP 159 (428)
T ss_dssp HHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC-C--TTCEEEEESSCCTTHHHHT---TTTTCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhC-C--CCCeEEEccCCCcchHHHH---HHhcCCEEEE
Confidence 346677788776 667788899999988887776653 2 7899999999999876643 3356888888
Q ss_pred eccc----------cccc-cC------CCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC--
Q 002263 174 SDLK----------DIDY-KS------GDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-- 230 (946)
Q Consensus 174 ~~~~----------~l~~-i~------~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~-- 230 (946)
++.+ ++++ ++ +++++|++++| |.+|.+.| +++|+++||++|+++++|. ..+.....
T Consensus 160 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-a~~~~~~~~~ 238 (428)
T 1iay_A 160 IHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDE-IYAATVFDTP 238 (428)
T ss_dssp ECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEEC-TTGGGCCSSS
T ss_pred eecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEec-cccccccCCC
Confidence 7652 2333 32 37999999998 55999998 9999999999999999943 22221111
Q ss_pred ---CCCC---------ccce--EEEecc-ccccccCCCCCCceEEEEE-chhhhhcCCCceEeEeecCCCCcceEEeccc
Q 002263 231 ---PPGE---------LGAD--IVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 294 (946)
Q Consensus 231 ---~~~~---------~GaD--i~v~s~-k~lg~P~~~GGP~~g~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~t 294 (946)
+... ++.| +++.|. |.|+.| |-.+|++.+ ++++++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~----Glr~G~~~~~~~~~~~~~~---------------------- 292 (428)
T 1iay_A 239 QFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLP----GFRVGIIYSFNDDVVNCAR---------------------- 292 (428)
T ss_dssp CCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCG----GGCEEEEEESCHHHHHHHH----------------------
T ss_pred CccCHHHhccccccccCCCCcEEEEecchhhcCCC----CceEEEEEeCCHHHHHHHH----------------------
Confidence 1011 2368 778887 877532 233689988 566655431
Q ss_pred ccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--
Q 002263 295 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-- 372 (946)
Q Consensus 295 re~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~-- 372 (946)
+...+.+. +.....+..+++-...+..+.++++.+++.++.++|.+.|+++| +++.......-+.+.+++
T Consensus 293 ------~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~ 364 (428)
T 1iay_A 293 ------KMSSFGLV-STQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG-IKCLKNNAGLFCWMDLRPLL 364 (428)
T ss_dssp ------HHHTTSCC-CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSSSEEEEECGGGC
T ss_pred ------HHHhcccC-CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCeeEEEEEechhhc
Confidence 00001111 11111111111100000122567788888999999999999987 776532111123344431
Q ss_pred -------HHHHHHHHHHc-CCeeeeec------CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 373 -------AHAIASAAYKI-EMNLRVVD------SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 373 -------~~~v~~~L~~~-GI~~~~~~------~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..++.++|.++ ||.++... ++.+|++++ .++++++++++++|.
T Consensus 365 ~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~ 421 (428)
T 1iay_A 365 RESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIR 421 (428)
T ss_dssp SSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHH
Confidence 45788999876 99886532 468999998 689999999999986
No 359
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.60 E-value=2.8e-13 Score=154.13 Aligned_cols=305 Identities=13% Similarity=0.058 Sum_probs=194.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCC---CCc-ceEEcccHHHHHHHHHHH
Q 002263 60 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL---PMS-NASLLDEGTAAAEAMAMC 135 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~---~~~-~~sl~~~~Ta~~ea~~la 135 (946)
+.|..+...|+.+.+.+.+...-...|.+. +|..+...++.+.+.+..|. ++. ++.+++|+|.+++.++.+
T Consensus 36 ~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~ 110 (396)
T 3jtx_A 36 HIGEPKHPTPKVITDALTASLHELEKYPLT-----AGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQT 110 (396)
T ss_dssp SCCSCCSCCCHHHHHHHHHTGGGGGSCCCT-----TCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHHHHhhhccCCCCC-----CCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHH
Confidence 344445557788777777654434555432 23233333344455555685 466 899999999888877666
Q ss_pred hccccCCC-----CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc---------ccccc-cCCCEeEEEEEcC-CCcee
Q 002263 136 NNIQKGKK-----KTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDVCGVLVQYP-GTEGE 199 (946)
Q Consensus 136 ~~~~~~~g-----d~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~-i~~~t~~v~v~~p-n~~G~ 199 (946)
+. . +| |+|+++...|+.+...++ ..|.+++.+++ +++++ +.+++++|++++| |.+|.
T Consensus 111 ~~-~--~g~~~~~d~vl~~~p~~~~~~~~~~----~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~ 183 (396)
T 3jtx_A 111 VL-N--PVSDGIKPAIVSPNPFYQIYEGATL----LGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGS 183 (396)
T ss_dssp HC-C--C---CCCCEEEEEESCCHHHHHHHH----HTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCC
T ss_pred Hh-C--CCCccCCCEEEEcCCCcHhHHHHHH----HcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCC
Confidence 53 2 54 799999999998887754 35888887764 34444 5568999999998 67999
Q ss_pred ecc---hHHHHHHHHhCCcEEEEEecCccccCCC--CC-C----------CccceEEEecc-ccccccCCCCCCceEEEE
Q 002263 200 VLD---YGDFIKNAHANGVKVVMATDLLALTILK--PP-G----------ELGADIVVGSA-QRFGVPMGYGGPHAAFLA 262 (946)
Q Consensus 200 i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~--~~-~----------~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~ 262 (946)
+.+ +++|+++|+++|++++++. ..+..... .+ . +.+.++++.|. |.|+.| |-.+|++.
T Consensus 184 ~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~ 258 (396)
T 3jtx_A 184 VLDLDGWKEVFDLQDKYGFIIASDE-CYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVP----GLRSGFVA 258 (396)
T ss_dssp CCCHHHHHHHHHHHHHHCCEEEEEC-TTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCG----GGCCEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEc-cccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCc----ccceEEEE
Confidence 875 4559999999999999953 32221111 11 1 36788999887 767543 33478998
Q ss_pred EchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHH
Q 002263 263 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 342 (946)
Q Consensus 263 ~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a 342 (946)
.++++.+.+... + .....+.|. ....+..++ +...+.++++.++..++.
T Consensus 259 ~~~~~~~~~~~~--------------------~----~~~~~~~~~---~~~~a~~~~----l~~~~~~~~~~~~~~~~~ 307 (396)
T 3jtx_A 259 GDAELLKNFLLY--------------------R----TYHGSAMSI---PVQRASIAA----WDDEQHVIDNRRLYQEKF 307 (396)
T ss_dssp ECHHHHHHHHHH--------------------H----HHHTCCCCH---HHHHHHHHH----HHCCHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHH--------------------H----hhcccCCCH---HHHHHHHHH----hCCHHHHHHHHHHHHHHH
Confidence 888777655100 0 000011111 112122222 223567888889999999
Q ss_pred HHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHH-HcCCeeeee------------cCCeEEEEeccCCCHHH
Q 002263 343 GTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAY-KIEMNLRVV------------DSNTVTASFDETTTLED 407 (946)
Q Consensus 343 ~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~-~~GI~~~~~------------~~~~lris~~~~~t~ed 407 (946)
+++.+.|++. +.+.......-+.+.++. ..++.++|. ++||.+..- ..+.+|+|++. ++++
T Consensus 308 ~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~ 383 (396)
T 3jtx_A 308 ERVIPILQQV--FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVAT 383 (396)
T ss_dssp HHHHHHHTTT--SCCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHH
T ss_pred HHHHHHHHhc--CCccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHH
Confidence 9999999875 222221111124455553 778888885 569987531 24789999875 8999
Q ss_pred HHHHHHHHh
Q 002263 408 VDKLFIVFA 416 (946)
Q Consensus 408 id~ll~~l~ 416 (946)
++++++.|.
T Consensus 384 i~~~l~~l~ 392 (396)
T 3jtx_A 384 CVKAAEDIV 392 (396)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999886
No 360
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.60 E-value=1.5e-14 Score=165.00 Aligned_cols=272 Identities=12% Similarity=0.063 Sum_probs=182.3
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 176 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~----- 176 (946)
.++++.+++++|.++.++.+++|+|.+++.++.++. . +||+|+++...|+.+...++ ..|.+++.++.
T Consensus 77 ~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~-~--~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~ 149 (397)
T 2zyj_A 77 APLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFL-D--EGSPVLLEAPSYMGAIQAFR----LQGPRFLTVPAGEEGP 149 (397)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC-C--TTCEEEEEESCCHHHHHHHH----TTCCEEEEEEEETTEE
T ss_pred HHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhC-C--CCCEEEEeCCCcHHHHHHHH----HcCCEEEecCcCCCCC
Confidence 356789999999887889999999988887766652 2 78999999999999887754 46777777654
Q ss_pred --ccccc-cCC-CEeEEE-EEcC-CCceeecch---HHHHHHHHhCCcEEEEEecCccccCC-----CCCCCccce----
Q 002263 177 --KDIDY-KSG-DVCGVL-VQYP-GTEGEVLDY---GDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGAD---- 238 (946)
Q Consensus 177 --~~l~~-i~~-~t~~v~-v~~p-n~~G~i~di---~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~~GaD---- 238 (946)
++|++ +++ ++++|+ +.+| |.+|.+.|. ++|+++|+++|+++++|. ..+.... .+...++.|
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDD-AYRELYFGEARLPSLFELAREAGYP 228 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEEC-TTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeC-CcccccCCCCCCCchhhhCcccCCC
Confidence 44555 543 788875 5677 679998764 599999999999999953 3332211 111234444
Q ss_pred --EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 239 --IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 239 --i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
++++|. |.|+ | |-.+|++++++++.+.+.... . . ..-++ |. ....
T Consensus 229 ~~i~~~s~sK~~~-~----G~r~G~~~~~~~~~~~l~~~~----------~-----------~--~~~~~-~~---~~~~ 276 (397)
T 2zyj_A 229 GVIYLGSFSKVLS-P----GLRVAFAVAHPEALQKLVQAK----------Q-----------G--ADLHT-PM---LNQM 276 (397)
T ss_dssp CEEEEEESTTTTC-G----GGCCEEEECCHHHHHHHHHHH----------H-----------H--HHSSC-CH---HHHH
T ss_pred eEEEEeccccccc-c----cceeEEEecCHHHHHHHHHHH----------H-----------h--hcCCC-CH---HHHH
Confidence 788887 7774 3 234699999988776551000 0 0 00111 11 1111
Q ss_pred HHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhcC-C-CEEEcCCCCcCeEEEecCC---HHHHHHHHHHcCCeeee
Q 002263 316 ANMAAMYAVYHGP-EGLKTIAQRVHGLAGTFALGLKKL-G-TVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRV 389 (946)
Q Consensus 316 a~~aa~y~~~~g~-~Gl~~i~~~~~~~a~~l~~~L~~~-g-~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~ 389 (946)
+..++ +. .+. +.++++.++..++.+++.+.|++. + ++++.......-+.+.++. +.++.++|.++||.+..
T Consensus 277 a~~~~--l~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 353 (397)
T 2zyj_A 277 LVHEL--LK-EGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAFVP 353 (397)
T ss_dssp HHHHH--HT-TTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTEEEEE
T ss_pred HHHHH--HH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEec
Confidence 11111 11 121 457788888889999999999874 2 2777532222234455542 78899999999998864
Q ss_pred e--------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 390 V--------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 390 ~--------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. .++.+|++++.. +++|++++++.|..
T Consensus 354 g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~ 388 (397)
T 2zyj_A 354 GGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGR 388 (397)
T ss_dssp SGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHH
T ss_pred hHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHH
Confidence 2 247899999986 89999999999974
No 361
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.60 E-value=7.6e-14 Score=161.90 Aligned_cols=330 Identities=15% Similarity=0.130 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHhc--CCcceeecCCCCCCCCCcHHHHHHHHhCCc------cccccCCChhhhhhhHHHHHHHHHHHHHH
Q 002263 39 SQMIEHMQKLASM--NKVYKSFIGMGYYNTHVPPVILRNIMENPA------WYTQYTPYQAEIAQGRLESLLNFQTMIAD 110 (946)
Q Consensus 39 ~e~~~~~~~l~~~--n~~~~~~~G~g~~~~~~p~~i~~~i~~~~~------~~t~~~pyq~e~sqg~l~~l~e~q~~la~ 110 (946)
.++.+.......+ +..+. .++.|+.+...|+.+.+.+.+... ....|+|. +| ..++++.+++
T Consensus 53 ~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~-----~g----~~~lr~~ia~ 122 (449)
T 3qgu_A 53 PEIARRRKAHQEKNPDAKII-SLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAE-----QG----QGALREAVAS 122 (449)
T ss_dssp HHHHHHHHHHHHHCTTCCCE-ECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTT-----TC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEE-EeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCC-----CC----cHHHHHHHHH
Confidence 3555555555443 22232 245566555577766545442111 12233322 11 3456778888
Q ss_pred Hh----CCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE----------EEEecc
Q 002263 111 LT----GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK----------VVVSDL 176 (946)
Q Consensus 111 L~----g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~----------v~~~~~ 176 (946)
++ +.++.++.+++|++++++.+ .++. . +||+|+++...|+++...++.. |.+ ++.++.
T Consensus 123 ~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~-~--~gd~Vl~~~p~~~~~~~~~~~~----g~~g~~~~~~~~~~~~~~~ 194 (449)
T 3qgu_A 123 TFYGHAGRAADEIFISDGSKCDIARI-QMMF-G--SKPTVAVQDPSYPVYVDTSVMM----GMTGDHNGTGFDGIEYMVC 194 (449)
T ss_dssp HHHTTTTCCGGGEEEESCHHHHHHHH-HHHH-C--SSSCEEEEESCCTHHHHHHHHH----TCSCCBCSSSBTTEEEEEC
T ss_pred HHHcCCCCCHHHEEEccCHHHHHHHH-HHHh-C--CCCEEEEcCCCChhHHHHHHHc----CCcccccccccceeEEEec
Confidence 87 67778899999999888776 4442 3 7899999999999998887643 433 555554
Q ss_pred c---cccc-cC--CCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC-----C----CCCccc
Q 002263 177 K---DIDY-KS--GDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-----P----PGELGA 237 (946)
Q Consensus 177 ~---~l~~-i~--~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~-----~----~~~~Ga 237 (946)
+ .+.. +. +++++|++++| |.+|.+.+ +++|+++|+++|+++++|. ..+..... + +...+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~De-a~~~~~~~~~~~~~~~~~~~~~~~ 273 (449)
T 3qgu_A 195 NPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDA-AYALYISNPDCPKTIYEIPGADEV 273 (449)
T ss_dssp CGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTGGGCCCTTSCSSGGGSTTGGGT
T ss_pred ccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEc-chHhhhcCCCCCCCHhhccCCCCc
Confidence 3 2221 21 57899999988 67998864 8899999999999999953 32221111 1 122467
Q ss_pred eEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccc-cCCCccchHHHH
Q 002263 238 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK-ATSNICTAQALL 315 (946)
Q Consensus 238 Di~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~-aTsni~t~~~l~ 315 (946)
+++++|. |.|+. +|..+|++++++++++.. ... + +.+-.+... .+++.. ..+..
T Consensus 274 ~i~~~s~sK~~g~----~G~r~G~~~~~~~~~~~~------------~~~-~------~~~~~~~~~~~~~~~~-~~~~~ 329 (449)
T 3qgu_A 274 AIETCSFSKYAGF----TGVRLGWTVVPKALKYAN------------GEP-V------HADWNRVMTTCFNGAS-NIVQA 329 (449)
T ss_dssp EEEEEECSGGGTC----TTCCCEEEECCTTCBCTT------------SCB-H------HHHHHHHHHHSCCCCC-HHHHH
T ss_pred EEEEecchhhcCC----ccceeEEEecCHHHHhhh------------hhh-H------HHHHHHHhhcccCCCC-HHHHH
Confidence 8989887 88853 345689999887665420 000 0 000000111 111111 11111
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHHc-CCeeeee--
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKI-EMNLRVV-- 390 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~~-GI~~~~~-- 390 (946)
+..+++ ...+.+.++++.++..++.++|++.|+++| +++.......-+.+.+++ ..++.+.|.++ ||.+..-
T Consensus 330 a~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~ 406 (449)
T 3qgu_A 330 GGLACL--QPEGLKEMNAMIKFYKENAQILKTTFTEMG-FSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPGSG 406 (449)
T ss_dssp HHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEESSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGG
T ss_pred HHHHHH--hhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCeeEEEEECCCCCHHHHHHHHHHHCCEEEecchH
Confidence 221111 111234577888999999999999999987 776532212234445543 77888888875 9987542
Q ss_pred ----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 ----DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 ----~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.++.+|+|+. .++++|+++++.|.
T Consensus 407 f~~~~~~~iRis~~--~~~e~i~~~l~~l~ 434 (449)
T 3qgu_A 407 YGPAGEGFVRASAF--GSRENILEAVRRFK 434 (449)
T ss_dssp GCGGGTTEEEEECC--SCHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 2588999954 59999999999886
No 362
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.60 E-value=4.5e-14 Score=162.67 Aligned_cols=145 Identities=14% Similarity=0.153 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHH----HHcCCEEEEE-
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA----AMCGMKIVSV- 595 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a----~~~G~~vv~v- 595 (946)
...++++.+++++|.+.. +..++|+++...+ ++.+. +++++||++...|+.+...+ ...|++++.+
T Consensus 59 ~~~~l~~~la~~~g~~~~-v~~~sGt~A~~~~---l~~~~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 129 (421)
T 2ctz_A 59 TVDVLEKRLAALEGGKAA-LATASGHAAQFLA---LTTLA-----QAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTS 129 (421)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHHHH---HHHHC-----CTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHhCCCce-EEecCHHHHHHHH---HHHHh-----CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 356888999999998754 5566776655433 33321 25689999988777665543 6789999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccCHHHHHHHHHHcCCEEEEeccc-ccccccccCCCccCCC
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGAN-MNAQVGLTSPGYIGAD 673 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~i~~I~~ia~~~g~ll~vD~a~-~~a~~gl~~pg~~GaD 673 (946)
+.+ |+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++ ..+. ...+..+|+|
T Consensus 130 ~~~-----d~~~l~~~i~---~~~~~v~~~~~~n~~G~~~-~l~~i~~~a~~~g~~livD~~~~~~g~--~~~~~~~~~D 198 (421)
T 2ctz_A 130 REE-----RPEEFLALTD---EKTRAWWVESIGNPALNIP-DLEALAQAAREKGVALIVDNTFGMGGY--LLRPLAWGAA 198 (421)
T ss_dssp TTC-----CHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHTCEEEEECGGGGGGT--SCCGGGGTCS
T ss_pred CCC-----CHHHHHHhhc---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCcccccc--cCCccccCCe
Confidence 764 8999999996 78999999999 4689988 7999999999999999999987 4332 2345567899
Q ss_pred EEEeCCCccccc
Q 002263 674 VCHLNLHKTFCI 685 (946)
Q Consensus 674 i~~~s~hK~f~~ 685 (946)
++++++||+|+.
T Consensus 199 i~~~s~~K~l~~ 210 (421)
T 2ctz_A 199 LVTHSLTKWVGG 210 (421)
T ss_dssp EEEEETTTTTTC
T ss_pred EEEECCcccccC
Confidence 999999999853
No 363
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.59 E-value=5.7e-14 Score=160.24 Aligned_cols=278 Identities=10% Similarity=0.014 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
...++++.+|+++|.+ ++.++++||.+++.++.+++.. +||+|+++...|+++...++. .|++++.++++
T Consensus 33 ~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~l~~~--~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~v~~~~~ 104 (394)
T 1o69_A 33 FVNRFEQSVKDYSKSE--NALALNSATAALHLALRVAGVK--QDDIVLASSFTFIASVAPICY----LKAKPVFIDCDET 104 (394)
T ss_dssp HHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCGGGTHHHHH----TTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCC--CCCEEEECCCccHHHHHHHHH----cCCEEEEEEeCCC
Confidence 4567889999999984 5889999998888877766333 789999999999999888754 58888887653
Q ss_pred ------cccc-cCC---CEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC---CCC-ccceEEEec
Q 002263 178 ------DIDY-KSG---DVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGE-LGADIVVGS 243 (946)
Q Consensus 178 ------~l~~-i~~---~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~---~~~-~GaDi~v~s 243 (946)
++++ +++ ++++|++++ .+|...|+++|.++|+++|+++++|. ..+.+.... .+. .++|+..++
T Consensus 105 ~~~d~~~l~~~i~~~~~~~~~v~~~~--~~G~~~~l~~i~~l~~~~~~~li~De-a~~~g~~~~~~~~~~~~~~~~~s~s 181 (394)
T 1o69_A 105 YNIDVDLLKLAIKECEKKPKALILTH--LYGNAAKMDEIVEICKENDIVLIEDA-AEALGSFYKNKALGTFGEFGVYSYN 181 (394)
T ss_dssp SSBCHHHHHHHHHHCSSCCCEEEEEC--GGGCCCCHHHHHHHHHHTTCEEEEEC-TTCTTCEETTEETTSSSSEEEEECC
T ss_pred CCcCHHHHHHHHhcccCCceEEEEEC--CCCChhhHHHHHHHHHHcCCEEEEEC-cCcccceeCCcccccccCcEEEEEe
Confidence 3444 544 689999886 68999999999999999999999943 334332211 122 357888887
Q ss_pred c-ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH
Q 002263 244 A-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 321 (946)
Q Consensus 244 ~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~ 321 (946)
. |.+ ||+++|+++++ +++.+.+.....+. .+ ..+.| |. +..++..+|+++. +.+++.
T Consensus 182 ~~K~l------~~~~~G~~~~~~~~l~~~l~~~~~~~-~~--~~~~~----~~--~~~g~~~~~~~~~---aa~~l~--- 240 (394)
T 1o69_A 182 GNKII------TTSGGGMLIGKNKEKIEKARFYSTQA-RE--NCLHY----EH--LDYGYNYRLSNVL---GAIGVA--- 240 (394)
T ss_dssp TTSSS------CCSSCEEEEESCHHHHHHHHHHTBTC-CC--SSSSC----CC--SSCCCBCBCCHHH---HHHHHH---
T ss_pred CCccC------CCCCceEEEECCHHHHHHHHHHHHhc-cc--cCccc----cc--cccCcccCcCHHH---HHHHHH---
Confidence 6 644 33468999996 67665542110000 00 00001 11 1112233344442 111111
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-----CCcCeEEEecC----------------------C--
Q 002263 322 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-----PFFDTVKVKCA----------------------D-- 372 (946)
Q Consensus 322 y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~-----~~~~~~~i~~~----------------------~-- 372 (946)
. .+-++++.++..++.+++++.|+++ +++... +.+..+.+.++ +
T Consensus 241 --~---l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (394)
T 1o69_A 241 --Q---MEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPK 313 (394)
T ss_dssp --H---HTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHH
T ss_pred --H---HHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccC
Confidence 1 1235667788899999999999886 665532 12223444443 2
Q ss_pred HHHHHHHHHHcCCeeeeec----------C--------------CeEEEEeccCCCHHHHHHHHHHHh
Q 002263 373 AHAIASAAYKIEMNLRVVD----------S--------------NTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 373 ~~~v~~~L~~~GI~~~~~~----------~--------------~~lris~~~~~t~edid~ll~~l~ 416 (946)
..++.+.|.++||.++... . ..+++..+.++|++|+++++++|+
T Consensus 314 ~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~ 381 (394)
T 1o69_A 314 ISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLIL 381 (394)
T ss_dssp HHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHH
Confidence 6789999999999875320 0 346666788999999999999996
No 364
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.59 E-value=2.5e-14 Score=159.72 Aligned_cols=271 Identities=16% Similarity=0.168 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe------
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS------ 174 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~------ 174 (946)
..++++.+|+++|.+ ++.++.+||.+...++.++. . +||+|++++..|+++..... .++..|++++.+
T Consensus 40 ~~~l~~~la~~~g~~--~~~~~~~gt~a~~~~~~~~~-~--~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 113 (347)
T 1jg8_A 40 INELERLAAETFGKE--AALFVPSGTMGNQVSIMAHT-Q--RGDEVILEADSHIFWYEVGA-MAVLSGVMPHPVPGKNGA 113 (347)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHC-C--TTCEEEEETTCHHHHSSTTH-HHHHTCCEEEEECEETTE
T ss_pred HHHHHHHHHHHhCCc--eEEEecCcHHHHHHHHHHhc-C--CCCEEEEcCcchhhhccccc-hhhccCeEEEEecCCCCc
Confidence 346778999999986 36788888877665555442 2 89999999999987653210 012346676665
Q ss_pred -ccccccc-cCC------CEeEEEEEcC-CCc-eeecc---hHHHHHHHHhCCcEEEEEe-cCc-cccCC-CCCCC--cc
Q 002263 175 -DLKDIDY-KSG------DVCGVLVQYP-GTE-GEVLD---YGDFIKNAHANGVKVVMAT-DLL-ALTIL-KPPGE--LG 236 (946)
Q Consensus 175 -~~~~l~~-i~~------~t~~v~v~~p-n~~-G~i~d---i~~i~~~a~~~gal~~v~a-~~~-al~~l-~~~~~--~G 236 (946)
|++++++ +++ +|++|++.+| |.+ |.+.| +++|+++|+++|+++++|. +.. ++... .++.. .+
T Consensus 114 ~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 193 (347)
T 1jg8_A 114 MDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY 193 (347)
T ss_dssp ECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHT
T ss_pred cCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccc
Confidence 3345555 654 6999999998 567 99854 6799999999999999953 321 11100 12222 36
Q ss_pred ceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH
Q 002263 237 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 315 (946)
Q Consensus 237 aDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~ 315 (946)
+|.++.+. |+|+.| -.++++.++++++++.. + +.. ..++.+. .++.
T Consensus 194 ~d~~~~s~sK~l~~~------~G~~~~~~~~~~~~~~~--------------~------~~~----~~~~~~~---~~~~ 240 (347)
T 1jg8_A 194 ADSVMFCLSKGLCAP------VGSVVVGDRDFIERARK--------------A------RKM----LGGGMRQ---AGVL 240 (347)
T ss_dssp CSEEEEESSSTTCCS------SCEEEEECHHHHHHHHH--------------H------HHH----HTCCCSS---THHH
T ss_pred ccEEEEecccccCCC------ceEEEEcCHHHHHHHHH--------------H------HHH----cCCchhH---HHHH
Confidence 89887777 777543 22466677766654310 0 000 0011111 1111
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CCCCcCeEEEecC--C--HHHHHHHHHHcCCeeeee
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV 390 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~~~ 390 (946)
+..+...+..+ .+-++ +..++++++++.|+++| +++. .++..+.+.+.++ + ..++.++|.++||.++..
T Consensus 241 ~~~~~~~l~~~-~~~~~----~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 314 (347)
T 1jg8_A 241 AAAGIIALTKM-VDRLK----EDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAV 314 (347)
T ss_dssp HHHHHHHHHHS-STTHH----HHHHHHHHHHHHHHHHT-CBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEE
T ss_pred HHHHHHHHHHH-HHHHH----HHHHHHHHHHHHHHhcC-ceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCCEEecC
Confidence 11111111221 12222 23356788888888775 7652 2222233555554 3 788999999999998876
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 391 DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 391 ~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..+.+|++++.+++++|+++++++|+
T Consensus 315 ~~~~iRl~~~~~~~~e~i~~~~~~l~ 340 (347)
T 1jg8_A 315 SDTEIRLVTHKDVSRNDIEEALNIFE 340 (347)
T ss_dssp ETTEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999986
No 365
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.59 E-value=6.9e-15 Score=169.26 Aligned_cols=300 Identities=14% Similarity=0.116 Sum_probs=178.2
Q ss_pred cccHHHHHHHHHHHHHHhhCC--Cc---ccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcC
Q 002263 515 AQGYQEMFNNLGEWLCTITGF--DS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 589 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~--~~---~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G 589 (946)
.+|..++...+.+++....+. +. ..+++++|+++...++.... .. .++++|+++...|..+...+...|
T Consensus 91 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~-~~-----~~gd~Vlv~~p~~~~~~~~~~~~g 164 (420)
T 4f4e_A 91 IDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLR-TL-----NPKAKVAISDPSWENHRALFDMAG 164 (420)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHH-HH-----CTTCCEEEEESCCHHHHHHHHHTT
T ss_pred CCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHH-Hh-----CCCCEEEEeCCCcHhHHHHHHHcC
Confidence 356656555555555444331 12 22445555555533321111 11 246789999988877777788999
Q ss_pred CEEEEEcC--CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccccccc
Q 002263 590 MKIVSVGT--DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGL 664 (946)
Q Consensus 590 ~~vv~v~~--~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl 664 (946)
.+++.+|+ +.++.+|+++|+++++++.++++++++++| |.+|.+- +++++|+++|+++|+++++|.++.....+.
T Consensus 165 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~ 244 (420)
T 4f4e_A 165 FEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESI 244 (420)
T ss_dssp CCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCT
T ss_pred CeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCc
Confidence 99999998 346789999999999866578899999998 5788874 258899999999999999998853111000
Q ss_pred ----c----CCCccCCCEEEeCCCcccccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 665 ----T----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 665 ----~----~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
. .++..+-++++.+++|+|+.| |.++|++.+ ++++...+-...... ....+.+.+
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-- 310 (420)
T 4f4e_A 245 EADAAAVRLFAAANLNVFVSSSFSKSFSLY----GERVGALSIITDSKDEAARVLSQLKRV--------IRTNYSNPP-- 310 (420)
T ss_dssp TGGGHHHHHHHHTTCCEEEEEECTTTTTCG----GGCEEEEEEECSSHHHHHHHHHHHHHH--------HHTTTSSCC--
T ss_pred chhhHHHHHHHhcCCCEEEEEeCCccCcCc----CCCcEEEEEEcCCHHHHHHHHHHHHHH--------HhcccCCCC--
Confidence 0 011234567788899998543 677998864 223222110000000 000111111
Q ss_pred ccchhhHHHHHHHHHHHH-----cHhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEEEecccccccCC
Q 002263 734 PWGSALILPISYTYIAMM-----GSKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAG 805 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~l-----G~eGl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v~~~~~~~~~~g 805 (946)
..++ .++..++... ..+.+.+..++...+.+++.+.|++.. .+.+..+++.. |++ . +
T Consensus 311 ~~~~----~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~---~~~--~------~ 375 (420)
T 4f4e_A 311 THGG----AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGM---FSY--S------G 375 (420)
T ss_dssp SHHH----HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSS---EEE--C------C
T ss_pred HHHH----HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccE---EEE--e------C
Confidence 1111 1122222211 123456666777788899999998752 22211112222 222 1 2
Q ss_pred CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 806 IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 806 ~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.+.+.+.+.|.++||.+.. + .|+++.. .+++++++++++|++++
T Consensus 376 ~~~~~~~~~l~~~gI~v~~------~-~Ris~~~-~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 376 LTSAQVDRLREEFGIYAVS------T-GRICVAA-LNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCHHHHHHHHHHHCEECCT------T-SEEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEecC------C-CeEEEec-CCHHHHHHHHHHHHHHh
Confidence 3566777888889998752 1 2888864 36677999999998764
No 366
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.59 E-value=9.7e-14 Score=160.16 Aligned_cols=336 Identities=13% Similarity=0.122 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHhcCCc-ceeecCCCCCCCCCcHHHHHHHHhCCc------cccccCCChhhhhhhHHHHHHHHHHHHHHH
Q 002263 39 SQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPA------WYTQYTPYQAEIAQGRLESLLNFQTMIADL 111 (946)
Q Consensus 39 ~e~~~~~~~l~~~n~~-~~~~~G~g~~~~~~p~~i~~~i~~~~~------~~t~~~pyq~e~sqg~l~~l~e~q~~la~L 111 (946)
.++.+.......+... -.-.++.|.++...|+.+.+.+.+... -+..|+|. +| ..++++.++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~-----~g----~~~l~~~ia~~ 110 (432)
T 3ei9_A 40 PEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAE-----QG----AKPLRAAIAKT 110 (432)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCT-----TC----CHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCC-----CC----CHHHHHHHHHH
Confidence 3444444444433321 112356777777778777655543211 12234322 12 23456677777
Q ss_pred h----CCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCC---------eEEEEeccc-
Q 002263 112 T----GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFD---------IKVVVSDLK- 177 (946)
Q Consensus 112 ~----g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~g---------i~v~~~~~~- 177 (946)
+ +.++.++.+++|+++++..+ .++ .. +||+|+++...|+++...++.. ...+ .+++.++++
T Consensus 111 ~~~~~~~~~~~i~~t~G~~~al~~l-~~l-~~--~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 185 (432)
T 3ei9_A 111 FYGGLGIGDDDVFVSDGAKCDISRL-QVM-FG--SNVTIAVQDPSYPAYVDSSVIM-GQTGQFNTDVQKYGNIEYMRCTP 185 (432)
T ss_dssp HHTTTTCCGGGEEEESCHHHHHHHH-HHH-HC--TTCCEEEEESCCTHHHHHHHHH-TCSCCEETTTTEETTCEEEECCG
T ss_pred HHccCCCCcceEEECCChHHHHHHH-HHH-cC--CCCEEEEeCCCCHHHHHHHHHc-CCcccccccccccCceEEeccCc
Confidence 5 77888899999999887753 333 22 8999999999999998887653 2222 234444442
Q ss_pred --cccc-c--CCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCC----C----CCCccceEE
Q 002263 178 --DIDY-K--SGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----P----PGELGADIV 240 (946)
Q Consensus 178 --~l~~-i--~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~----~----~~~~GaDi~ 240 (946)
.+.. + .+++++|++.+| |.+|.+. ++++|+++|+++|+++++|. ..+..... . ++..+.+++
T Consensus 186 ~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~De-a~~~~~~~~~~~~~~~~~~~~~~~i~ 264 (432)
T 3ei9_A 186 ENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDS-AYAMYMSDDNPRSIFEIPGAEEVAME 264 (432)
T ss_dssp GGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTGGGCCSSCCSSGGGSTTGGGTEEE
T ss_pred ccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEcc-chHhhccCCCCCChhhcCCCCCeEEE
Confidence 1211 2 357899999998 6799886 47788888999999999942 33311111 1 123456799
Q ss_pred Eecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHH
Q 002263 241 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 319 (946)
Q Consensus 241 v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~a 319 (946)
++|. |.|+.| |-.+|+++++++++..- ..+ ..-.+ ...++ ..+++. +..+..+..+
T Consensus 265 ~~S~SK~~g~~----G~r~G~~~~~~~~~~~~------------~~~-~~~~~----~~~~~-~~~~~~-~~~~~~a~~~ 321 (432)
T 3ei9_A 265 TASFSNYAGFT----GVRLGWTVIPKKLLYSD------------GFP-VAKDF----NRIIC-TCFNGA-SNISQAGALA 321 (432)
T ss_dssp EEESHHHHCTT----TTCCEEEECCTTCBCTT------------SCB-HHHHH----HHHHH-HSCCCS-CHHHHHHHHH
T ss_pred EecchhccCCc----ccceEEEEEChHHhhcc------------hHH-HHHHH----HHHhc-cccCCC-CHHHHHHHHH
Confidence 9997 888632 34578998887652110 000 00000 00000 011111 1112212221
Q ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEecCC--HHHHHHHHHH-cCCeeeee------
Q 002263 320 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYK-IEMNLRVV------ 390 (946)
Q Consensus 320 a~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~--~~~v~~~L~~-~GI~~~~~------ 390 (946)
++ ...+.+.++++.+++.++.+++++.|+++| +++.......-+.+.+++ ..++.+.|.+ +||.+..-
T Consensus 322 ~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~ 398 (432)
T 3ei9_A 322 CL--TPEGLEAMHKVIGFYKENTNIIIDTFTSLG-YDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPG 398 (432)
T ss_dssp HS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCGG
T ss_pred HH--hcccHHHHHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeCchHhCCC
Confidence 11 111224567888899999999999999987 777632211224555554 6778888775 49988642
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 391 DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 391 ~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++.+|+|+ .+++++|++.++.|+.
T Consensus 399 ~~~~iRis~--~~~~e~l~~~l~rl~~ 423 (432)
T 3ei9_A 399 GEGFVRVSA--FGHRENILEACRRFKQ 423 (432)
T ss_dssp GTTEEEEEC--CSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEe--cCCHHHHHHHHHHHHH
Confidence 257899997 5699999999999974
No 367
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.58 E-value=1.8e-13 Score=160.10 Aligned_cols=289 Identities=18% Similarity=0.179 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHhhC--CCcccccCCchHHHHHHHHHHHHHHHHh--cCC----------------CC--CCEEEEc-CCC
Q 002263 521 MFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKA--RGD----------------HH--RNVCIIP-VSA 577 (946)
Q Consensus 521 ~~~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~a~r~y~~~--~G~----------------~~--~~~Ili~-~sa 577 (946)
+..++.+.++++++ .+. .++.++|++++++++.+++.|+.. +|. .+ +++||+. .+.
T Consensus 111 l~~~la~~l~~~~~~~~~~-v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~y 189 (472)
T 1ohv_A 111 FVEKLRESLLSVAPKGMSQ-LITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAF 189 (472)
T ss_dssp HHHHHHHTGGGGCCTTCCE-EEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCC
T ss_pred HHHHHHHHHHHhCCCCcCE-EEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCc
Confidence 44455555666663 333 466789999998888888776421 221 11 4677765 578
Q ss_pred CCCCHHHHHHcCCEE-----------EEEcCCCC-C-------------CCCHHHHHHHHHhcCC---CeEEEEEeC-CC
Q 002263 578 HGTNPATAAMCGMKI-----------VSVGTDAK-G-------------NINIEELRKAAEANRD---NLSTLMVTY-PS 628 (946)
Q Consensus 578 Hg~~~~~a~~~G~~v-----------v~v~~~~~-g-------------~~D~e~L~~~i~~~~~---~t~~vvvt~-Pn 628 (946)
||....+..+.|.+. ..+++... . ..|+++|+++|+++.+ ++++|+++. +|
T Consensus 190 Hg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~ 269 (472)
T 1ohv_A 190 HGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQS 269 (472)
T ss_dssp CCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBC
T ss_pred ccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcC
Confidence 998887766554321 22233110 0 2378999999975322 788888865 35
Q ss_pred cccccccC---HHHHHHHHHHcCCEEEEecccccccccccCCC------ccC----CCEEEeCCCcccccCCCCCCCcce
Q 002263 629 THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YIG----ADVCHLNLHKTFCIPHGGGGPGMG 695 (946)
Q Consensus 629 ~~G~~~~~---i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg------~~G----aDi~~~s~hK~f~~P~g~GGPg~G 695 (946)
.+|++.++ +++|+++|++||+++|+|+++. |+.+.| .+| +|+++++ |++ + || |
T Consensus 270 ~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~----g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~---l--~G---G 335 (472)
T 1ohv_A 270 EGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT----GGGSTGKFWAHEHWGLDDPADVMTFS--KKM---M--TG---G 335 (472)
T ss_dssp TTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT----TTTTTSSSSGGGGGCCSSCCSEEEEC--GGG---S--SE---E
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc----CCCCCCCchhccccCCCCCCCEEEEc--ccc---c--cC---C
Confidence 68987622 9999999999999999999864 222222 235 7888764 874 1 22 5
Q ss_pred eEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHh
Q 002263 696 PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE 775 (946)
Q Consensus 696 ~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~ 775 (946)
++. ++.+....+.. ..+..+ ++...++++.+.|..+..+++. ++...+.++|.++|+
T Consensus 336 ~~~-~~~~~~~~~~~---------------~~~T~~----~~~~~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~ 392 (472)
T 1ohv_A 336 FFH-KEEFRPNAPYR---------------IFNTWL----GDPSKNLLLAEVINIIKREDLL---SNAAHAGKVLLTGLL 392 (472)
T ss_dssp EEE-CGGGSCSSSSS---------------SCCSSS----SCHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHH
T ss_pred ccC-chhhccccccc---------------ccCccC----ccHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHH
Confidence 554 55543211110 011122 2344444555666666555443 445567788888887
Q ss_pred cc---CC--ee-eccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 002263 776 KH---YP--IL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 849 (946)
Q Consensus 776 ~~---~~--v~-~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~ 849 (946)
+. +. +. ..+ .+.+ +.+++.. ..+..++.++|.++|+.+.... .+.||++++..+|++|||++
T Consensus 393 ~l~~~~~~~v~~~~~-~g~~---~~~~~~~-----~~~~~~~~~~l~~~Gv~~~~~g---~~~iRi~~~~~~t~e~i~~~ 460 (472)
T 1ohv_A 393 DLQARYPQFISRVRG-RGTF---CSFDTPD-----ESIRNKLISIARNKGVMLGGCG---DKSIRFRPTLVFRDHHAHLF 460 (472)
T ss_dssp HHHHHCTTTCEEEEE-ETTE---EEEECSS-----HHHHHHHHHHHHHTTEECEEET---TTEEEECCCTTCCHHHHHHH
T ss_pred HHHhhCCCcEEeecC-CceE---EEEEeCC-----hhHHHHHHHHHHHCCeEEecCC---CCEEEEECCCCCCHHHHHHH
Confidence 64 32 21 112 1222 3345431 1235689999999999864321 47899999999999999999
Q ss_pred HHHHHHHHHH
Q 002263 850 CDALISIREE 859 (946)
Q Consensus 850 ~~aL~~i~~e 859 (946)
+++|++++++
T Consensus 461 ~~~l~~~l~~ 470 (472)
T 1ohv_A 461 LNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 368
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.58 E-value=3.2e-15 Score=170.15 Aligned_cols=290 Identities=12% Similarity=0.051 Sum_probs=172.9
Q ss_pred HHHHHHHHhh-CC--Cccccc---CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC
Q 002263 524 NLGEWLCTIT-GF--DSFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 597 (946)
Q Consensus 524 el~~~la~l~-G~--~~~~l~---~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~ 597 (946)
++++.+++++ +. +...+. +++|+++...++.+++.+ . ++++|+++...|..+...+...|.+++.++.
T Consensus 73 ~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~--~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 146 (394)
T 2ay1_A 73 EFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMA--N----PDLRVFVSDPTWPNHVSIMNFMGLPVQTYRY 146 (394)
T ss_dssp HHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHH--C----TTCCEEEEESCCHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhc--C----CCCEEEEcCCCChhHHHHHHHcCCceEEEec
Confidence 4445555554 43 333332 566666665554444322 1 3577998887776666678889999999998
Q ss_pred C--CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEeccccc-cccc---ccCC-
Q 002263 598 D--AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG---LTSP- 667 (946)
Q Consensus 598 ~--~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~~-a~~g---l~~p- 667 (946)
+ .++.+|+++|+++++++.++++++++++|+ .+|.+.+ ++++|+++|+++|+++++|+++.. ..++ ....
T Consensus 147 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 226 (394)
T 2ay1_A 147 FDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTR 226 (394)
T ss_dssp EETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHH
T ss_pred ccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHH
Confidence 5 457799999999998543457778888884 6888752 478899999999999999998642 1110 0000
Q ss_pred --CccCCC-EEEeCCCcccccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 668 --GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 668 --g~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
...+.| +++.++||+|+. +|.++|++++ ++++.+.+........ + ..+. +++ ....
T Consensus 227 ~~~~~~~~~i~~~s~sK~~~~----~G~riG~~~~~~~~~~~~~~l~~~~~~~~-------~-~~~~--~~~----~~~~ 288 (394)
T 2ay1_A 227 LIASRIPEVLIAASCSKNFGI----YRERTGCLLALCADAATRELAQGAMAFLN-------R-QTYS--FPP----FHGA 288 (394)
T ss_dssp HHHHHCSSEEEEEECTTTTTC----GGGCEEEEEEECSSHHHHHHHHHHHHHHH-------H-TTTS--SCC----CHHH
T ss_pred HHhhcCCCEEEEEeccCCCcC----cCCccceEEEEeCCHHHHHHHHHHHHHHH-------h-hhcC--CCC----hHHH
Confidence 112444 556788999853 3567899987 4443221100000000 0 0001 111 1111
Q ss_pred HHHHHHHHHH-----cHhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEEEecccccccCCCCHHHHHH
Q 002263 742 PISYTYIAMM-----GSKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 813 (946)
Q Consensus 742 ~~a~a~l~~l-----G~eGl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~ 813 (946)
.++.+++... -.+.+.+..++...+.+++.+.|++.. .+.+..+.+..+ +.++ .+...+.+
T Consensus 289 ~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~--~~~~---------~~~~~~~~ 357 (394)
T 2ay1_A 289 KIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMF--SRLG---------ATPEQVKR 357 (394)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSE--EECC---------CCHHHHHH
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEE--EeeC---------CCHHHHHH
Confidence 2222333221 124566666777778889999887641 122111121121 2222 23456777
Q ss_pred HHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 814 RLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 814 ~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
.|.++|+.+.. .+|++++ .++++|+++++++|+++
T Consensus 358 ~l~~~gi~v~~-------~~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 358 IKEEFGIYMVG-------DSRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp HHHHHCEECCT-------TCEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred HHHhCCEEecC-------CCeEEee-cCCHhhHHHHHHHHHHc
Confidence 77789998741 3699987 46899999999999875
No 369
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.57 E-value=4.2e-13 Score=155.06 Aligned_cols=292 Identities=13% Similarity=0.156 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHhh-CCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHH----------
Q 002263 520 EMFNNLGEWLCTIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAM---------- 587 (946)
Q Consensus 520 ~~~~el~~~la~l~-G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~---------- 587 (946)
+...++++++++++ +.+.+ +..++|++++++++.++|.+. ++++||+ ..+.||....+...
T Consensus 96 ~~~~~l~~~la~~~~~~~~v-~~~~sgseA~~~al~~ar~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 168 (434)
T 2epj_A 96 EAEVLLAEKILGYVKRGGMI-RFVNSGTEATMTAIRLARGYT------GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGV 168 (434)
T ss_dssp HHHHHHHHHHHHHHCTTCEE-EEESSHHHHHHHHHHHHHHHH------CCCEEEEEETCCCCSSGGGSEECC------CE
T ss_pred HHHHHHHHHHHHhCCCCCEE-EEeCCHHHHHHHHHHHHHHhh------CCCeEEEEcCCcCCCCHHHHHhcCCCccccCC
Confidence 34567889999998 54433 566788888776666655442 2455665 45778765433211
Q ss_pred ---cCC------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC----HHHHHHHHHHcCCEEEE
Q 002263 588 ---CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYM 653 (946)
Q Consensus 588 ---~G~------~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia~~~g~ll~v 653 (946)
.|+ +++.++. .|+++|+++++++.+++++|+++.. +.+|.+. + +++|.++|++||+++++
T Consensus 169 p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~-~~~~~l~~l~~l~~~~g~~lI~ 242 (434)
T 2epj_A 169 PTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIAGVIVEPVIANAGVIP-PRREFLAALQRLSRESGALLIL 242 (434)
T ss_dssp ESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBC-CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccC-CCHHHHHHHHHHHHHcCCEEEE
Confidence 243 3556664 3899999999754347777776543 3478776 5 99999999999999999
Q ss_pred ecccccccccccCCC-----ccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 654 DGANMNAQVGLTSPG-----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 654 D~a~~~a~~gl~~pg-----~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
|+++. .+ .....+ ...+|++++ +|+|+ +|.++|++++++++.+.+... + +....+
T Consensus 243 DEv~~-g~-~~g~~~~~~~~~~~~di~s~--sK~l~-----~G~~~G~v~~~~~~~~~l~~~--~---------~~~~~~ 302 (434)
T 2epj_A 243 DEVVT-GF-RLGLEGAQGYFNIEGDIIVL--GKIIG-----GGFPVGAVAGSREVMSLLTPQ--G---------KVFNAG 302 (434)
T ss_dssp EETTT-TT-TSSTTHHHHHHTCCCSEEEE--EGGGG-----TTSSCEEEEECHHHHTTBTTT--S---------SBCCCC
T ss_pred Ecchh-ce-eCCcchhhHHhCCCCCeeee--cchhc-----CCcceeeeeecHHHHHhhccC--C---------CcccCC
Confidence 99864 12 111111 124788765 59885 356689999998776655310 0 000001
Q ss_pred CcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEecccccc-
Q 002263 729 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN- 802 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~~~~- 802 (946)
+.+ ++...++++.+.|..+..+.+. ++...+.+++.++|++. +.+. ..+ .+.+ +.+++.....
T Consensus 303 t~~----~~~~~~aa~~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~i~~~~~~~~ 371 (434)
T 2epj_A 303 TFN----AHPITMAAGLATLKALEEEPVY---SVSREAAKALEEAASEVLDRTGLPYTINR-VESM---MQLFIGVEEVS 371 (434)
T ss_dssp TTT----TCHHHHHHHHHHHHHHHHSCHH---HHHHHHHHHHHHHHHHHHHHHTCCEEEEE-ETTE---EEEEETCSCCS
T ss_pred CCC----cCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHhhCCCcEEEEE-eeeE---EEEEEeCCCcc
Confidence 112 2334444555566655444433 44456778888888763 2221 222 1322 3444431000
Q ss_pred -------cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 803 -------TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 803 -------~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
.......++.++|.++|+.+....+ ..++ ++...|++|+++++++|+++++++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~--~~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 372 NAAQARKADKKFYVKLHEEMLRRGVFIAPSNL---EAVF--TGLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp SHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---SCEE--CCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred cchhccccCHHHHHHHHHHHHHCCeEEeccCC---CcEE--EeccCCHHHHHHHHHHHHHHHHHH
Confidence 0011356899999999998754332 2344 456789999999999999988765
No 370
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.57 E-value=9.6e-14 Score=158.64 Aligned_cols=270 Identities=11% Similarity=0.074 Sum_probs=178.3
Q ss_pred HHHHHHHHHh----C--CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 103 NFQTMIADLT----G--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 103 e~q~~la~L~----g--~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
++++.+|+++ | .++.++.+++|+|.++++++.++. . +||+|+++...|+.+...++ ..|++++.++.
T Consensus 79 ~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~-~--~gd~vl~~~p~~~~~~~~~~----~~g~~~~~v~~ 151 (407)
T 2zc0_A 79 ELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLI-D--PGDVVITENPSYINTLLAFE----QLGAKIEGVPV 151 (407)
T ss_dssp HHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHC-C--TTCEEEEEESCCHHHHHHHH----TTTCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhc-C--CCCEEEEeCCChHHHHHHHH----HcCCEEEEccc
Confidence 4556777776 8 456788899999988887776652 2 78999999999998877653 46778777654
Q ss_pred -------ccccc-cC----C--CEeEEE-EEcC-CCceeecchH---HHHHHHHhCCcEEEEEecCccccCC-----CCC
Q 002263 177 -------KDIDY-KS----G--DVCGVL-VQYP-GTEGEVLDYG---DFIKNAHANGVKVVMATDLLALTIL-----KPP 232 (946)
Q Consensus 177 -------~~l~~-i~----~--~t~~v~-v~~p-n~~G~i~di~---~i~~~a~~~gal~~v~a~~~al~~l-----~~~ 232 (946)
++|++ ++ + ++++|+ +.+| |.+|.+.|++ +|+++|+++|+++++|. ..+.... .+.
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~ 230 (407)
T 2zc0_A 152 DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDT-AYNFMRYEGGDIVPL 230 (407)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC-TTTTSBSSCSSCCCG
T ss_pred CCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEC-CCcccccCCCCCCCh
Confidence 44555 55 4 788875 5677 6799998876 99999999999999953 3332211 111
Q ss_pred CC---ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCc
Q 002263 233 GE---LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 308 (946)
Q Consensus 233 ~~---~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni 308 (946)
.. .+.+++++|. |.|+ | | -.+|++++++++.+.+... +. ..+.
T Consensus 231 ~~~~~~~~~i~~~s~sK~~~-~-G---~r~G~~~~~~~~~~~~~~~--------------------------~~--~~~~ 277 (407)
T 2zc0_A 231 KALDNEGRVIVAGTLSKVLG-T-G---FRIGWIIAEGEILKKVLMQ--------------------------KQ--PIDF 277 (407)
T ss_dssp GGGCSSCCEEEEEESTTTTC-T-T---SCCEEEECCHHHHHHHHHH--------------------------HT--TTTS
T ss_pred hhcCCCCCEEEEcccccccC-C-C---cceEEEecCHHHHHHHHHH--------------------------HH--hhcC
Confidence 12 2556788886 8775 3 1 1368999988776654110 00 0011
Q ss_pred cchHH-HHHHHHHHHHHHhC--h-hhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCCCcCeEEEecC-C--HHHHHHHH
Q 002263 309 CTAQA-LLANMAAMYAVYHG--P-EGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTVKVKCA-D--AHAIASAA 380 (946)
Q Consensus 309 ~t~~~-l~a~~aa~y~~~~g--~-~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~-~--~~~v~~~L 380 (946)
+++.. ..+..++ +. .+ . +.++++.++..++.+++.+.|++. +++++..+....-+.+.++ + +.++.+.|
T Consensus 278 ~~~~~~~~~~~~~--l~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 354 (407)
T 2zc0_A 278 CAPAISQYIALEY--LK-RGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGISFANEL 354 (407)
T ss_dssp SSCHHHHHHHHHH--HH-TTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHH--HH-cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHHHHHHHH
Confidence 11111 1122222 12 12 2 456677888888999999999873 3366543221223445654 2 77899999
Q ss_pred HHc-CCeeeee--------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 381 YKI-EMNLRVV--------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 381 ~~~-GI~~~~~--------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.++ ||.+... .++.+|+|++.. |++|+++++++|..
T Consensus 355 ~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~ 399 (407)
T 2zc0_A 355 MEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAK 399 (407)
T ss_dssp HHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHH
T ss_pred HHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHH
Confidence 988 9987542 247899999987 89999999999974
No 371
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.57 E-value=5.6e-13 Score=151.84 Aligned_cols=271 Identities=7% Similarity=-0.023 Sum_probs=179.3
Q ss_pred HHHHHHHHH----hC--CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 103 NFQTMIADL----TG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 103 e~q~~la~L----~g--~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
++++.++++ .| .++.++.+++|+|.++++++.++. . +||+|+++...|+++...++ ..|.+++.++.
T Consensus 70 ~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~--~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~ 142 (399)
T 1c7n_A 70 EYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFT-K--PGDGVIIITPVYYPFFMAIK----NQERKIIECEL 142 (399)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-C--TTCEEEECSSCCTHHHHHHH----TTTCEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhc-C--CCCEEEEcCCCcHhHHHHHH----HcCCEEEeccc
Confidence 344555555 47 566789999999988887776653 2 78999999999999887753 45778777654
Q ss_pred -----------ccccc-cC-CCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-----CCCCC
Q 002263 177 -----------KDIDY-KS-GDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KPPGE 234 (946)
Q Consensus 177 -----------~~l~~-i~-~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~ 234 (946)
++|++ ++ +++++|++.+| |.+|.+.| +++|+++|+++|++++++. ..+.... .+...
T Consensus 143 ~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~ 221 (399)
T 1c7n_A 143 LEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDE-IHFDLIMPGYEHTVFQS 221 (399)
T ss_dssp EEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEEC-TTTTCBCTTCCCCCGGG
T ss_pred ccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEc-cccccccCCCCcccHHH
Confidence 23444 55 68999999988 67999987 9999999999999999953 3222111 11111
Q ss_pred -----ccceEEEecc-ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 235 -----LGADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 235 -----~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
.+.++++.|. |.|+.| |..+|+++++ +++.+.+.... . . ...++.|
T Consensus 222 ~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~l~~~~----------~-----------~--~~~~~~~ 274 (399)
T 1c7n_A 222 IDEQLADKTITFTAPSKTFNIA----GMGMSNIIIKNPDIRERFTKSR----------D-----------A--TSGMPFT 274 (399)
T ss_dssp SCHHHHTTEEEEECSHHHHTCG----GGCCEEEECCCHHHHHHHHHHH----------H-----------H--TTCCCCC
T ss_pred cCccccCcEEEEEeChhhcccc----chheEEEEECCHHHHHHHHHHH----------h-----------h--cccCCCC
Confidence 3457888887 887532 3346999987 45665541000 0 0 0001112
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCCCCcCeE-EEecC----CHHHHHHHHH
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLPFFDTV-KVKCA----DAHAIASAAY 381 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~~~~~~~-~i~~~----~~~~v~~~L~ 381 (946)
. ....+..+++ . .+.+.++++.++..++.+++.+.|++ ++++++.... ...+ .+.++ +..++.+.|.
T Consensus 275 ~---~~~~a~~~~l--~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 347 (399)
T 1c7n_A 275 T---LGYKACEICY--K-ECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIE-GTYLQWIDFRALKMDHKAMEEFMI 347 (399)
T ss_dssp H---HHHHHHHHHH--H-HCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCS-BSSEEEEECGGGCCCHHHHHHHHH
T ss_pred H---HHHHHHHHHH--h-CChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCC-ceEEEEEEcccCCCCHHHHHHHHH
Confidence 1 1222222222 2 34567888889999999999999998 6337665321 1112 24443 2778999997
Q ss_pred -HcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 382 -KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 382 -~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++||.+... .++.+|+|++.. +++++++++.|..
T Consensus 348 ~~~gi~v~~g~~~~~~~~~~iRis~~~~--~~~l~~~l~~l~~ 388 (399)
T 1c7n_A 348 HKAQIFFDEGYIFGDGGIGFERINLAAP--SSVIQESLERLNK 388 (399)
T ss_dssp HTTCCCCEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHHHH
T ss_pred HhCCEEEeCccccCCCCCCeEEEEeccC--HHHHHHHHHHHHH
Confidence 689988642 247899999864 7889999988863
No 372
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.57 E-value=6.2e-14 Score=156.89 Aligned_cols=276 Identities=14% Similarity=0.193 Sum_probs=175.6
Q ss_pred HHHHHHHHhhCCCcccccCCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcC-CCCC
Q 002263 524 NLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT-DAKG 601 (946)
Q Consensus 524 el~~~la~l~G~~~~~l~~~sG-a~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~-~~~g 601 (946)
++++++++++|.+...+..++| +++. .++++.+ . +++|+++...|..+...+...|++++.+++ ++++
T Consensus 54 ~lr~~la~~~~~~~~~i~~t~g~~~al---~~~~~~l------~-gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~ 123 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNNAILVTNGPTAAF---YQIAQAF------R-GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIG 123 (350)
T ss_dssp HHHHHHHHHTTCCGGGEEEESHHHHHH---HHHHHHT------T-TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGG
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHHHH---HHHHHHH------C-CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccc
Confidence 6889999999987654444444 4343 3334432 1 478999888776666678889999999998 6544
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcC-CEEEEeccccccc-ccccCC---CccCCCEE
Q 002263 602 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG-GQVYMDGANMNAQ-VGLTSP---GYIGADVC 675 (946)
Q Consensus 602 ~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g-~ll~vD~a~~~a~-~gl~~p---g~~GaDi~ 675 (946)
.+++ +++++|++++|+ .+|.+. ++++|.++++.++ .++++|+++.... .+...+ ...+.+++
T Consensus 124 ~~~~-----------~~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~ 191 (350)
T 3fkd_A 124 EADF-----------SNMDFCWLCNPNNPDGRLL-QRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVM 191 (350)
T ss_dssp GSCC-----------TTCSEEEEESSCTTTCCCC-CHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEE
T ss_pred cCcc-----------CCCCEEEEeCCCCCcCCCC-CHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEE
Confidence 4443 467889999994 699998 7999999998876 7999999864211 010001 12345588
Q ss_pred EeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhh
Q 002263 676 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 755 (946)
Q Consensus 676 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eG 755 (946)
+.+++|+|+.| |.++|++.+++++.+.+... + . ..+. +.....++.++|.... .
T Consensus 192 ~~S~sK~~~~~----G~r~G~~~~~~~~~~~~~~~------------~--~--~~~~----~~~~~~~~~~~l~~~~--~ 245 (350)
T 3fkd_A 192 VYSFSHAYGIP----GLRIGYIVANKDFMKRVAAF------------S--T--PWAV----NALAIEAAKFILIHPA--Q 245 (350)
T ss_dssp EEESHHHHSCG----GGCCEEEECCHHHHHHHHTT------------C--C--TTCS----CHHHHHHHHHHHHCTT--T
T ss_pred EecCchhccCc----chheEeEEeCHHHHHHHHHh------------C--C--CCCC----CHHHHHHHHHHHhCHH--H
Confidence 88999998643 57789999887766544211 0 0 1111 1222222333333221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHH-CCcccCC-CCCC--CCC
Q 002263 756 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPT-MSWP--VPG 831 (946)
Q Consensus 756 l~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~-~Gi~~~~-~~~p--~~~ 831 (946)
+.+..++...+++++.+.|+++..+.+..+.+.+ +.+.++. + +..++.++|.+ +||.+.. ..|+ ..+
T Consensus 246 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~~~~-----~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~ 316 (350)
T 3fkd_A 246 FTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTF---FLLRLKK-----G-TAAELKKYMLEEYNMLIRDASNFRGLDES 316 (350)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHSTTEEECCCSSSE---EEEEESS-----S-CHHHHHHHHHHTTCEECEECTTSTTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEECCCCCcE---EEEECCC-----C-CHHHHHHHHHHHCCEEEEeCccCCCCCCC
Confidence 2222333347888999999875233222222222 3355541 2 78899999998 9998643 2332 257
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 832 TLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 832 ~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+||++. +.+|+|+|+++|+++.++
T Consensus 317 ~iRis~~---~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 317 YVRITTQ---RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp EEEEECC---CHHHHHHHHHHHHHHHTC
T ss_pred EEEEEcC---CHHHHHHHHHHHHHHHHH
Confidence 9999985 789999999999887554
No 373
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.57 E-value=5.8e-14 Score=159.88 Aligned_cols=274 Identities=15% Similarity=0.099 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCCCC-HHHHHHHHHhhc---------CCC
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCH-PQTIDICITRAD---------GFD 168 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~H-ps~~~~~~~~a~---------~~g 168 (946)
...++++.+++++|.+..++.+++|||.++++++.+++ +. ++++||+.+..| ..+...+. ++. +..
T Consensus 88 ~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~--~~~~vi~~~~~y~~~~~~~~~-~~g~~~~~~~~~p~~ 164 (395)
T 1vef_A 88 MRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHT--GRKKFVAAMRGFSGRTMGSLS-VTWEPKYREPFLPLV 164 (395)
T ss_dssp HHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHH--SCCEEEEETTCCCCSSHHHHH-TCCCHHHHGGGCSCS
T ss_pred HHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHh--CCCeEEEEcCCcCCCchhhhh-hcCCcccccccCCCC
Confidence 45678889999998877788899999988887765442 23 678888777655 44443332 111 111
Q ss_pred eEEEE---eccccccc-cCCCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCcc-ccCCCCC-----C
Q 002263 169 IKVVV---SDLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKPP-----G 233 (946)
Q Consensus 169 i~v~~---~~~~~l~~-i~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~a-l~~l~~~-----~ 233 (946)
.++.. .|+++|++ +++++++|++..+ |.+|.+.| +++|.++||++|+++++|. ..+ ++..... .
T Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~De-a~~~~~~~g~~~~~~~~ 243 (395)
T 1vef_A 165 EPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDE-IQTGMGRTGKRFAFEHF 243 (395)
T ss_dssp SCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEEC-TTTTTTTTSSSSTHHHH
T ss_pred CCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEe-cccCCccCCchhHhhhc
Confidence 12333 34567777 7788998887654 56899888 9999999999999999943 333 3211111 1
Q ss_pred CccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH
Q 002263 234 ELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 313 (946)
Q Consensus 234 ~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~ 313 (946)
..++|++.+ +|+|+. |...|++++++++.+.+.. +.. ..|.+. +...
T Consensus 244 ~~~~d~~s~-sK~~~~-----g~~~G~~~~~~~~~~~l~~----------~~~----------------~~~~~~-~~~~ 290 (395)
T 1vef_A 244 GIVPDILTL-AKALGG-----GVPLGVAVMREEVARSMPK----------GGH----------------GTTFGG-NPLA 290 (395)
T ss_dssp TCCCSEEEE-CGGGGT-----TSSCEEEEEEHHHHHTSCT----------TSS----------------CCSSTT-CHHH
T ss_pred CCCCCEEEE-cccccC-----CCceEEEEehHHHHhhhcc----------CCc----------------CCCcCC-CHHH
Confidence 235787733 588853 3457899999888776621 000 011111 1112
Q ss_pred HHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CCCcCeEEEecCC-HHHHHHHHH-HcCCeeee
Q 002263 314 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD-AHAIASAAY-KIEMNLRV 389 (946)
Q Consensus 314 l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~~~~~~~~i~~~~-~~~v~~~L~-~~GI~~~~ 389 (946)
..+..+++ ..+.. +++.++..++.+++.+.|++++ ..++. .+....+.+.++. ..++.+.|. ++||.++.
T Consensus 291 ~~a~~~al--~~~~~---~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~ 364 (395)
T 1vef_A 291 MAAGVAAI--RYLER---TRLWERAAELGPWFMEKLRAIP-SPKIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQ 364 (395)
T ss_dssp HHHHHHHH--HHHHH---HTTHHHHHHHHHHHHHHHHTSC-CTTEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHH--HHHHh---CCHHHHHHHHHHHHHHHHHHhh-cCceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEec
Confidence 22222332 33222 3466778889999999999876 32110 1111234455554 678999999 89999876
Q ss_pred ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 390 VDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 390 ~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..++.+|++++..++++|+++++++|+
T Consensus 365 ~~~~~iRi~~~~~~~~~~i~~~~~~l~ 391 (395)
T 1vef_A 365 AGPTVIRFLPPLVIEKEDLERVVEAVR 391 (395)
T ss_dssp SSTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 556899999999999999999999986
No 374
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.57 E-value=3.3e-14 Score=163.01 Aligned_cols=308 Identities=13% Similarity=0.124 Sum_probs=176.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--ccc-ccCCchHHHHHHHHHHHHHHHHhcCC-CCCCEEEEc-CCCCCCCHHHHH---
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIP-VSAHGTNPATAA--- 586 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~-~~~~~Ili~-~saHg~~~~~a~--- 586 (946)
.+|..++...+.+++.+..|.+ ... +.+++|+++.. ++++.+. .+|. +.+++|+++ ...|..+...+.
T Consensus 74 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~---~~~~~l~-~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~ 149 (417)
T 3g7q_A 74 PQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFF---YLFNLFA-GRRADGSTKKVLFPLAPEYIGYADSGLEDD 149 (417)
T ss_dssp TTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH---HHHHHHS-BC----CCBEEEESSCCCHHHHHC-----C
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHH---HHHHHHc-CCCccCCcceEEEeCCCccccchhhccchh
Confidence 3566666666666666655644 333 44455555543 3334331 3332 122378887 553322222221
Q ss_pred ---HcCCEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccc
Q 002263 587 ---MCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN 659 (946)
Q Consensus 587 ---~~G~~vv~v~~~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~ 659 (946)
..+..++.++.+. +..+|+++|+ ++ +++++|++++| |.+|.+. +++++|+++|++||+++++|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~---~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~ 224 (417)
T 3g7q_A 150 LFVSARPNIELLPEGQFKYHVDFEHLH--IG---EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGV 224 (417)
T ss_dssp CEEECCCEEEEEGGGEEEEECCGGGCC--CC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCT
T ss_pred hhccccCcccccCCcccccccCHHHhc--cc---cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 1334555665432 2468999888 43 78999999999 5689886 1399999999999999999998742
Q ss_pred ccccc----cCCCccCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCcc
Q 002263 660 AQVGL----TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 735 (946)
Q Consensus 660 a~~gl----~~pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~ 735 (946)
...++ ..+...+.++++.+++| ++ .+|.++|++.+++++.+.+..... ....+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~~~s~sK-~~----~~G~r~G~~~~~~~~~~~~~~~~~--------------~~~~~~~-- 283 (417)
T 3g7q_A 225 PFPGIIFSEARPLWNPNIILCMSLSK-LG----LPGSRCGIIIANDKTITAIANMNG--------------IISLAPG-- 283 (417)
T ss_dssp TTTCCBCSCCCCCCCTTEEEEEESGG-GT----CTTSCCEEEECCHHHHHHHHHHHH--------------HHCCCCC--
T ss_pred ccccccccccccCCCCCEEEEEechh-cc----CCCcceEEEEeCHHHHHHHHHhhc--------------ceeeCCC--
Confidence 11111 12233466788889999 43 346779999888776654321100 0011111
Q ss_pred chhhHHHHHHHHHHHHcHh-hHHH-HHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEEEecccccccCCCCHHH
Q 002263 736 GSALILPISYTYIAMMGSK-GLTE-ASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGIEPED 810 (946)
Q Consensus 736 g~~~~~~~a~a~l~~lG~e-Gl~~-~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~ 810 (946)
.....++.+++...... -+++ ..++...+.+++.+.|++.+ .+.+..+.+..+ +.++++. .+.+..+
T Consensus 284 --~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~--~~~~~~~----~~~~~~~ 355 (417)
T 3g7q_A 284 --GMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIF--LWLWFKD----LPITTEL 355 (417)
T ss_dssp --SHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSE--EEEECTT----CSSCHHH
T ss_pred --cHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceE--EEEEcCC----CCCCHHH
Confidence 11122223333322111 1111 23334456667777776632 232222222221 4466642 1467899
Q ss_pred HHHHHHHCCcccCC-CCC-C-C-------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 811 VAKRLMDYGFHGPT-MSW-P-V-------PGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 811 i~~~L~~~Gi~~~~-~~~-p-~-------~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
+.++|.++||.+.. ..| + . .+++||+++. ++++|+++++.|.++++++.+
T Consensus 356 l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 356 LYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp HHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998642 112 1 1 4689999985 899999999999999887654
No 375
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.57 E-value=2.2e-14 Score=164.38 Aligned_cols=250 Identities=13% Similarity=0.088 Sum_probs=157.9
Q ss_pred CEEEEcCCCCCCCHHHHHHcCCE-EEEEcCC--CCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHH
Q 002263 569 NVCIIPVSAHGTNPATAAMCGMK-IVSVGTD--AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICK 642 (946)
Q Consensus 569 ~~Ili~~saHg~~~~~a~~~G~~-vv~v~~~--~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ 642 (946)
++|+++...|..+...+...|++ ++.++.+ .++.+|+++|++++++++++++++++++|+ .+|.+. .++++|++
T Consensus 131 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~ 210 (412)
T 1ajs_A 131 TPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAS 210 (412)
T ss_dssp SCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred CeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHH
Confidence 78999888887777778889999 9999984 457799999999998655578888889994 688874 25889999
Q ss_pred HHHHcCCEEEEecccc-cccccc--cC-C-Ccc--CCC--EEEeCCCcccccCCCCCCCcceeEEE---ecc----cCCC
Q 002263 643 IIHDNGGQVYMDGANM-NAQVGL--TS-P-GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGV---KKH----LAPF 706 (946)
Q Consensus 643 ia~~~g~ll~vD~a~~-~a~~gl--~~-p-g~~--GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~---~~~----l~~~ 706 (946)
+|+++|+++++|+++. ....+. .. + ..+ ..| +++.++||+|+. .|.++|++++ +++ +...
T Consensus 211 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~riG~~~~~~~~~~~~~~~~~~ 286 (412)
T 1ajs_A 211 VMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGL----YNERVGNLTVVAKEPDSILRVLSQ 286 (412)
T ss_dssp HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCC----GGGCEEEEEEECSSHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCC----CCcceEEEEEecCCHHHHHHHHHH
Confidence 9999999999999853 111110 00 0 111 134 778889998852 2456899998 654 2221
Q ss_pred CCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc-----HhhHHHHHHHHHHHHHHHHHHHhccC---
Q 002263 707 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG-----SKGLTEASKIAILNANYMAKRLEKHY--- 778 (946)
Q Consensus 707 lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG-----~eGl~~~~~~~~~~a~~l~~~L~~~~--- 778 (946)
+.. .. ..+.. +.+ .....++.+.|.... .+.+.+..++...+.+++.+.|++..
T Consensus 287 ~~~-~~------------~~~~~-~~~----~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 348 (412)
T 1ajs_A 287 MQK-IV------------RVTWS-NPP----AQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG 348 (412)
T ss_dssp HHH-HH------------HTTTS-SCC----SHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHH-HH------------hcccC-CCC----hHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 110 00 00000 111 111122223333221 23556666777788899999998742
Q ss_pred CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 779 PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 779 ~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.+.+..+.+.. +++- +.+...+.+.|.++|+.+.. .+||+++. .++++++++++.|+++++
T Consensus 349 ~~~~~~~~~~~---~~~~--------~~~~~~~~~~l~~~gv~v~~-------~~Ris~~~-~~~~~i~~~~~~l~~~l~ 409 (412)
T 1ajs_A 349 TWNHITDQIGM---FSFT--------GLNPKQVEYLINQKHIYLLP-------SGRINMCG-LTTKNLDYVATSIHEAVT 409 (412)
T ss_dssp CCHHHHHCCSS---EEEC--------CCCHHHHHHHHHTTCEECCT-------TSEEEGGG-CCTTTHHHHHHHHHHHHH
T ss_pred CeeEEcCCCce---EEEe--------CCCHHHHHHHHHhCCEEecC-------CcEEEeee-CCHHHHHHHHHHHHHHHH
Confidence 12211111212 2221 12345555566688998741 26999884 478999999999998876
Q ss_pred H
Q 002263 859 E 859 (946)
Q Consensus 859 e 859 (946)
+
T Consensus 410 ~ 410 (412)
T 1ajs_A 410 K 410 (412)
T ss_dssp H
T ss_pred h
Confidence 5
No 376
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.57 E-value=1.9e-14 Score=164.97 Aligned_cols=297 Identities=10% Similarity=0.026 Sum_probs=177.0
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Cccc-cc--CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSFS-LQ--PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~~-l~--~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
+|..++...+.+++....|. +... +. +++|+++...++...+.+ .++++|+++...|..+...+...|+
T Consensus 73 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~------~~gd~Vl~~~p~~~~~~~~~~~~g~ 146 (412)
T 1yaa_A 73 TGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKF------FPDKLVYLSKPTWANHMAIFENQGL 146 (412)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH------CTTCCEEEEESCCTTHHHHHHTTTC
T ss_pred CCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHh------CCCCEEEEeCCCCccHHHHHHHcCc
Confidence 45555554455555433332 2222 33 455555554332222222 1457899998888888888889999
Q ss_pred EEEEEcC-CC-CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc-
Q 002263 591 KIVSVGT-DA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG- 663 (946)
Q Consensus 591 ~vv~v~~-~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~g- 663 (946)
+++.++. ++ ++.+|+++|+++++++++.++++++++|+ .+|.+. .++++|+++|+++|+++++|+++.. ..++
T Consensus 147 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 226 (412)
T 1yaa_A 147 KTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDL 226 (412)
T ss_dssp CEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCH
T ss_pred eEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 9999998 53 57799999999997543345666668885 689874 2588899999999999999998631 1111
Q ss_pred ---ccCC---CccCC----CEEEeCCCcccccCCCCCCCcceeEE--E-----ecc----cCCCCCCCccccCCCCCCCC
Q 002263 664 ---LTSP---GYIGA----DVCHLNLHKTFCIPHGGGGPGMGPIG--V-----KKH----LAPFLPSHPVVSTGGIPAPE 722 (946)
Q Consensus 664 ---l~~p---g~~Ga----Di~~~s~hK~f~~P~g~GGPg~G~i~--~-----~~~----l~~~lp~~~v~~~~d~~~~~ 722 (946)
.... ...+. ++++.+++|+|+. .|.++|+++ + ++. +...+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~----------- 291 (412)
T 1yaa_A 227 DKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGM----YGERVGCFHLALTKQAQNKTIKPAVTSQLAKII----------- 291 (412)
T ss_dssp HHHTHHHHHHHHHTTTTCCEEEEEECTTTSCC----GGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHH-----------
T ss_pred cchhHHHHHHHhcCCCCcceEEEeccCCCCCC----cCCcceEEEEEecCCCCCHHHHHHHHHHHHHHH-----------
Confidence 0000 11243 4667889998852 245689987 6 443 443321100
Q ss_pred CCCCCCCcccCccchhhHHHHHHHHHHHHc-----HhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEE
Q 002263 723 KSQPLGTIAAAPWGSALILPISYTYIAMMG-----SKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFI 794 (946)
Q Consensus 723 ~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG-----~eGl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v 794 (946)
+ . ...+++ .....++.++|.... .+.+.+..++...+.+++.+.|++.. .+.+..+.+.+ ++
T Consensus 292 ~--~-~~~~~~----~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~---~~ 361 (412)
T 1yaa_A 292 R--S-EVSNPP----AYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGM---FS 361 (412)
T ss_dssp H--T-TTSSCC----HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSS---EE
T ss_pred h--h-ccCCCC----hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceE---EE
Confidence 0 0 001111 111222233333221 23566677777788899999998752 12211112222 22
Q ss_pred EecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 795 VDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 795 ~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
+- +.+...+.+.|.++||.+.. .+||+++. .+++++++++++|++++++
T Consensus 362 ~~--------~~~~~~~~~~l~~~gi~v~~-------~~Ris~~~-~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 362 FT--------GLTPQMVKRLEETHAVYLVA-------SGRASIAG-LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp EC--------CCCHHHHHHHHHHHCEECCT-------TSEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred ee--------CCCHHHHHHHHHhCCEEecc-------CcEEEEcc-CCHhHHHHHHHHHHHHHHh
Confidence 21 23456675555678998752 47999974 5899999999999988754
No 377
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.56 E-value=2e-13 Score=156.99 Aligned_cols=329 Identities=12% Similarity=0.104 Sum_probs=198.0
Q ss_pred CHHHHHHHHHHHHhcCCcceeecCCCCCC---CCCcHHHHHHHH-----hCCcccccc-CCChhhhhhhHHHHHHHHHHH
Q 002263 37 TESQMIEHMQKLASMNKVYKSFIGMGYYN---THVPPVILRNIM-----ENPAWYTQY-TPYQAEIAQGRLESLLNFQTM 107 (946)
Q Consensus 37 se~e~~~~~~~l~~~n~~~~~~~G~g~~~---~~~p~~i~~~i~-----~~~~~~t~~-~pyq~e~sqg~l~~l~e~q~~ 107 (946)
.+..+.+++.+++++...+ + ++.|..+ ...|+.+.+.+. .++.....| ++. +| +.++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~i-~-l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~-----~g----~~~lr~~ 78 (423)
T 3ez1_A 10 ALDLARQAYEAFKARGLNL-N-MQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGV-----AG----LPSARAL 78 (423)
T ss_dssp HHHHHHHHHHHHHHHTCCE-E-SCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCT-----TC----CHHHHHH
T ss_pred HHHHHHHHHHHhhcCCceE-e-cCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCC-----CC----hHHHHHH
Confidence 3556778888887765443 2 3556443 235544443332 112222334 322 12 2357789
Q ss_pred HHHHhCCCCcceEEcccHHHHHH--HHHHHhccccCC---------CCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 108 IADLTGLPMSNASLLDEGTAAAE--AMAMCNNIQKGK---------KKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 108 la~L~g~~~~~~sl~~~~Ta~~e--a~~la~~~~~~~---------gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
+|++++.++.++.+++|+|.++. .++.++.. ..+ ||+|+++...|+.+...++. .|.+++.++.
T Consensus 79 ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~-~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~ 153 (423)
T 3ez1_A 79 FAGYLDVKAENVLVWNNSSLELQGLVLTFALLH-GVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQT----LGFELLTVDM 153 (423)
T ss_dssp HHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHT-CCTTCSSCGGGGCCEEEEEESCCHHHHHHHHH----HTCEEEEEEE
T ss_pred HHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhc-cCCCccccccCCCCEEEEcCCCcHHHHHHHHH----cCCEEEeccC
Confidence 99999999889999999998876 44444321 003 69999999999998887654 3777776644
Q ss_pred -------ccccc-c--CCCEeEEEEE-cC-CCceeecchH---HHHHHH-HhCCcEEEEEecCccc---cC--CCCC---
Q 002263 177 -------KDIDY-K--SGDVCGVLVQ-YP-GTEGEVLDYG---DFIKNA-HANGVKVVMATDLLAL---TI--LKPP--- 232 (946)
Q Consensus 177 -------~~l~~-i--~~~t~~v~v~-~p-n~~G~i~di~---~i~~~a-~~~gal~~v~a~~~al---~~--l~~~--- 232 (946)
++|++ + ++++++|+++ +| |.+|.+.+.+ +|+++| +++|+++++|. ..+. .. ...+
T Consensus 154 ~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De-~y~~~~~~~~~~~~~~~~ 232 (423)
T 3ez1_A 154 QSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADD-AYRVHHLVEEDRAEPVNF 232 (423)
T ss_dssp ETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEEC-TTSSCBCCSSSCCCCCCH
T ss_pred CCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEEC-CcchhhcCCCCCCCCcch
Confidence 45665 6 6789999865 56 7799998766 888888 99999999953 2221 11 1111
Q ss_pred -------CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccccccc
Q 002263 233 -------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 304 (946)
Q Consensus 233 -------~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~a 304 (946)
+..+.+++++|. |. +. +|..+|++.+++++++.+... +...
T Consensus 233 ~~~~~~~~~~~~~i~~~S~sK~-~~----~G~r~G~~~~~~~~~~~~~~~--------------------------~~~~ 281 (423)
T 3ez1_A 233 VVLARDAGYPDRAFVFASTSKI-TF----AGAGLGFVASSEDNIRWLSKY--------------------------LGAQ 281 (423)
T ss_dssp HHHHHHHTCTTSEEEEEESTTT-SC----SSSSCEEEEECHHHHHHHHHH--------------------------HHHS
T ss_pred hhhhhccCCCCeEEEEeCchhh-cc----CCcceEEEEeCHHHHHHHHHH--------------------------Hhhh
Confidence 234677888887 65 33 345689999988877654110 0001
Q ss_pred CCCccchHHHHHHHHHHHHHH-hC--hhhHHHHHH----HHHHHHHHHHHHHhcCC-CEEEcCCCCcCeEEEecCC--HH
Q 002263 305 TSNICTAQALLANMAAMYAVY-HG--PEGLKTIAQ----RVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCAD--AH 374 (946)
Q Consensus 305 Tsni~t~~~l~a~~aa~y~~~-~g--~~Gl~~i~~----~~~~~a~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~--~~ 374 (946)
+ .+++......++++ +.. .+ .+-+++..+ +...+.++|.+.|.++| ++++.......-+.+.+++ ..
T Consensus 282 ~--~~~~~~~~~a~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (423)
T 3ez1_A 282 S--IGPNKVEQARHVKF-LTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVAD 358 (423)
T ss_dssp C--SCCCHHHHHHHHHH-HHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSCHH
T ss_pred c--cCCCHHHHHHHHHH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCcHH
Confidence 1 11111111111111 121 11 122333333 33344555556666565 4776532211123444443 77
Q ss_pred HHHHHHHHcCCeeeee----------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 375 AIASAAYKIEMNLRVV----------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 375 ~v~~~L~~~GI~~~~~----------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++.+.|.++||.+... .++.+|+|+... ++++++++++.|..
T Consensus 359 ~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~ 410 (423)
T 3ez1_A 359 RVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAA 410 (423)
T ss_dssp HHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHH
Confidence 8999999999988651 247899999766 99999999999874
No 378
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.56 E-value=4.8e-14 Score=166.01 Aligned_cols=314 Identities=13% Similarity=0.138 Sum_probs=188.3
Q ss_pred cccHHHHHHHHHHHHHHhhC-CC--ccccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 515 AQGYQEMFNNLGEWLCTITG-FD--SFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G-~~--~~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
++|..++...+.+++.+..| ++ ...+. +++++++. .++++.+. .+|..++++|+++...|..+...+...|+
T Consensus 128 ~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai---~~~~~~l~-~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~ 203 (498)
T 3ihj_A 128 SQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGI---STILKILV-SGGGKSRTGVMIPIPQYPLYSAVISELDA 203 (498)
T ss_dssp CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHH---HHHHHHHC-CCCGGGSEEEEEEESCCTHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHH---HHHHHHHc-CCCCCCCCEEEEeCCCchhHHHHHHHcCC
Confidence 35666677777778877774 53 33444 44444444 23333321 22211246899999988888888999999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHhcCC--CeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccc-cc
Q 002263 591 KIVSVGTDAK--GNINIEELRKAAEANRD--NLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QV 662 (946)
Q Consensus 591 ~vv~v~~~~~--g~~D~e~L~~~i~~~~~--~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~ 662 (946)
+++.++++++ ..+|+++|++++++... ++++|++++| |.+|.+- +++++|+++|+++|+++++|.++... +.
T Consensus 204 ~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~ 283 (498)
T 3ihj_A 204 IQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYS 283 (498)
T ss_dssp EEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCC
T ss_pred EEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccC
Confidence 9999999765 47899999999984322 5899999999 4688874 25889999999999999999986421 11
Q ss_pred c---ccCCC----ccC------CC-EEEeCCCccc-ccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCC
Q 002263 663 G---LTSPG----YIG------AD-VCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKS 724 (946)
Q Consensus 663 g---l~~pg----~~G------aD-i~~~s~hK~f-~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~ 724 (946)
+ +.... +++ .. +++.+++|+| +.| |.++|++.+ ++++.+.+...
T Consensus 284 ~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~----G~R~G~~~~~~~~~~l~~~l~~~-------------- 345 (498)
T 3ihj_A 284 PDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGEC----GYRGGYMEVINLHPEIKGQLVKL-------------- 345 (498)
T ss_dssp TTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCS----SSCCEEEEEESCCHHHHHHHHHH--------------
T ss_pred CCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCc----ccceEEEEEecCCHHHHHHHHHH--------------
Confidence 1 00000 112 11 5567899998 333 677899874 45554432100
Q ss_pred CCCCCcccCccchhhHHHHHHHHHHHHcH------------hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeee
Q 002263 725 QPLGTIAAAPWGSALILPISYTYIAMMGS------------KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHE 792 (946)
Q Consensus 725 ~~~~~i~~~~~g~~~~~~~a~a~l~~lG~------------eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~e 792 (946)
.. ...+++..++.. .+ ..+.. +-+.+..++...+++++.+.|+++..+.+..+++.++
T Consensus 346 ~~-~~~~~~~~~q~a-----~~--~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~-- 415 (498)
T 3ihj_A 346 LS-VRLCPPVSGQAA-----MD--IVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMY-- 415 (498)
T ss_dssp HH-HSCCCCHHHHHH-----HH--HHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSE--
T ss_pred Hh-ccCCCCHHHHHH-----HH--HHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEE--
Confidence 00 112222112211 11 11110 1123344556678889999998753333322233222
Q ss_pred EEEeccc-cc-----ccCCCCHHHH--HHHHHHCCcccCC-CCC---CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 002263 793 FIVDLRG-LK-----NTAGIEPEDV--AKRLMDYGFHGPT-MSW---PVPGTLMIEPTESESKEELDRYCDALISIREEI 860 (946)
Q Consensus 793 ~v~~~~~-~~-----~~~g~~~~~i--~~~L~~~Gi~~~~-~~~---p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~ 860 (946)
+++++.. -+ ...+.+.+++ .+.|.++||.+.. ..| +..+++|+++. .++++++++++.|.+++++.
T Consensus 416 ~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~--~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 416 AFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL--PPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp ECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHH
Confidence 2223210 00 0124555654 4556678998632 223 22468999994 68999999999999998876
Q ss_pred HH
Q 002263 861 AQ 862 (946)
Q Consensus 861 ~~ 862 (946)
++
T Consensus 494 ~~ 495 (498)
T 3ihj_A 494 LE 495 (498)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 379
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.56 E-value=2.8e-14 Score=162.38 Aligned_cols=298 Identities=12% Similarity=0.113 Sum_probs=174.7
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Ccc--c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 516 QGYQEMFNNLGEWLCTITGF--DSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~--~~~--~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
+|..++...+.+++....+. +.. . +.+++|+++...++.....+ .++++|+++...|..+...+...|.
T Consensus 70 ~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~------~~gd~vl~~~p~~~~~~~~~~~~g~ 143 (397)
T 3fsl_A 70 EGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRY------FPESGVWVSDPTWENHVAIFAGAGF 143 (397)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHH------CTTCCEEEESSCCHHHHHHHHHTTC
T ss_pred CchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhc------CCCCeEEEeCCCchhHHHHHHHcCC
Confidence 46555555555555443331 222 3 44555555543332111111 2457899998877777777889999
Q ss_pred EEEEEcC--CCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEecccccccccc-
Q 002263 591 KIVSVGT--DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGL- 664 (946)
Q Consensus 591 ~vv~v~~--~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl- 664 (946)
+++.++. ++++.+|+++|+++++++.++++++++++| |.+|.+- .++++|+++|+++|+++++|.++.....+.
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 223 (397)
T 3fsl_A 144 EVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGME 223 (397)
T ss_dssp CEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTT
T ss_pred ceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcc
Confidence 9999998 456789999999999866578889999998 4688873 158899999999999999998863111000
Q ss_pred ---cC----CCccCCCEEEeCCCcccccCCCCCCCcceeEEEe---cccCCCCCCCccccCCCCCCCCCCCCCCCcccCc
Q 002263 665 ---TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 734 (946)
Q Consensus 665 ---~~----pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~---~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~ 734 (946)
.. +...+-++++.+++|+|+. .|.++|++.+. +.+...+-...... ....+...+ .
T Consensus 224 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~riG~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~--~ 289 (397)
T 3fsl_A 224 EDAYAIRAIASAGLPALVSNSFSKIFSL----YGERVGGLSVMCEDAEAAGRVLGQLKAT--------VRRNYSSPP--N 289 (397)
T ss_dssp GGGHHHHHHHHTTCCEEEEEECTTTTTC----GGGCCEEEEEECSSHHHHHHHHHHHHHH--------HHTTTSSCC--S
T ss_pred cccHHHHHHHhcCCCEEEEecccccccC----cCCCeeEEEEecCCHHHHHHHHHHHHHH--------HHhccCCCC--H
Confidence 00 0112345777888998854 36778998752 22222110000000 000011111 1
Q ss_pred cchhhHHHHHHHHHHH-----HcHhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEEEecccccccCCC
Q 002263 735 WGSALILPISYTYIAM-----MGSKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGI 806 (946)
Q Consensus 735 ~g~~~~~~~a~a~l~~-----lG~eGl~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v~~~~~~~~~~g~ 806 (946)
.++ .++..++.. ...+.+.+..++...+.+++.+.|++.. .+.+..+++.. +++ . +.
T Consensus 290 ~~~----~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~---~~~-~-------~~ 354 (397)
T 3fsl_A 290 FGA----QVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGM---FSY-T-------GL 354 (397)
T ss_dssp HHH----HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSS---EEE-C-------CC
T ss_pred HHH----HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceE---EEe-c-------CC
Confidence 111 111122211 1134456666777788899999998752 22221111212 222 1 23
Q ss_pred CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 807 EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 807 ~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+.+.+.+.|.++||.+.. +. ||++.. .++++|++++++|+++
T Consensus 355 ~~~~~~~~l~~~gi~v~~------g~-Ris~~~-~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 355 SAAQVDRLREEFGVYLIA------SG-RMCVAG-LNTANVQRVAKAFAAV 396 (397)
T ss_dssp CHHHHHHHHHTTCEECCT------TC-EEEGGG-CCTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEECC------CC-eEEEEe-cCHhhHHHHHHHHHhh
Confidence 456777888899998752 22 888864 3567899999999865
No 380
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=6.5e-14 Score=160.83 Aligned_cols=243 Identities=17% Similarity=0.146 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHhCCCCcceEE---cccHHHHHHHHHHHhccccCCCCEEEEcC-CCCHHHHHHHH-------HhhcCCCe
Q 002263 101 LLNFQTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS-NCHPQTIDICI-------TRADGFDI 169 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl---~~~~Ta~~ea~~la~~~~~~~gd~vvv~~-~~Hps~~~~~~-------~~a~~~gi 169 (946)
..++++.+|+++|.+. +.+ +.+||+++.+++.++ +. +||+||+++ ..|+.....+. ..++..|+
T Consensus 76 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~al-l~--pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~ 150 (427)
T 3hvy_A 76 RDSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGN-LR--PNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGV 150 (427)
T ss_dssp HHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHT-CC--TTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTC
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHh-cC--CCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCC
Confidence 4566789999999986 345 689998887777665 23 899999998 88887765541 22345799
Q ss_pred EEEEecc-------ccccc-cC--CCEeEEEEEc----C-CCceeecchHHHHHHHHh--CCcEEEEEecCccccC-CCC
Q 002263 170 KVVVSDL-------KDIDY-KS--GDVCGVLVQY----P-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTI-LKP 231 (946)
Q Consensus 170 ~v~~~~~-------~~l~~-i~--~~t~~v~v~~----p-n~~G~i~di~~i~~~a~~--~gal~~v~a~~~al~~-l~~ 231 (946)
+++.+|. +++++ ++ ++|++|++++ | |.+|.+.|+++|+++||+ +|++++|| +.++.+. ...
T Consensus 151 ~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD-~a~~~~~~~~~ 229 (427)
T 3hvy_A 151 KYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVD-NCYGEFVEEKE 229 (427)
T ss_dssp EEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEE-CTTCTTTSSSC
T ss_pred EEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEE-CCccccccCCC
Confidence 9999876 44555 66 7899999998 8 679999999999999999 89999995 3445554 346
Q ss_pred CCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccc
Q 002263 232 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 310 (946)
Q Consensus 232 ~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t 310 (946)
|.++|+|++++|. |.|+++ |.|..|++++++++++++..+. . . ..+...-+.+ ..
T Consensus 230 p~~~gaDiv~~S~sK~lgg~---g~~~GG~i~~~~~li~~l~~~~-----~---~-----------~~~g~~~~~~-~~- 285 (427)
T 3hvy_A 230 PTDVGADIIAGSLIKNIGGG---IATTGGYIAGKEEYVTQATFRV-----T---V-----------PGIGGECGST-FG- 285 (427)
T ss_dssp GGGGTCSEEEEETTSGGGTT---TCCSCEEEEECHHHHHHHHHHH-----S---C-----------TTTGGGCCCC-TT-
T ss_pred CcccCCeEEEECCccccccc---ccceEEEEEECHHHHHHHHHHh-----h---c-----------CCcccccCCC-HH-
Confidence 6789999999998 877631 2366699999998877652110 0 0 0000111100 00
Q ss_pred hHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---CcC-eEEEecCC---HHHHHHHHHHc
Q 002263 311 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFD-TVKVKCAD---AHAIASAAYKI 383 (946)
Q Consensus 311 ~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~~-~~~i~~~~---~~~v~~~L~~~ 383 (946)
... +.+.|-.-+....++..+++.++++.|+++| +++...+ ..+ .+.|.+.+ +.++++.|...
T Consensus 286 -~a~--------~~~~gl~~~~~r~~~~~~~a~~la~~L~~~g-~~V~p~~~~~~~~li~~~~l~~~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 286 -VMR--------SLYEGLFMAPHVTIEAVKGAVFCARIMELAG-FDVLPKYNDKRTDIIQAIKFNDEKKLIDFIKGIQTA 355 (427)
T ss_dssp -CHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEESCTTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred -HHH--------HHHHhHhHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence 011 1112222334566778899999999999998 7775321 111 34444443 44555666553
No 381
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.55 E-value=4.2e-13 Score=155.87 Aligned_cols=271 Identities=13% Similarity=0.071 Sum_probs=178.9
Q ss_pred HHHHHHHHHh----CC-CCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-
Q 002263 103 NFQTMIADLT----GL-PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 176 (946)
Q Consensus 103 e~q~~la~L~----g~-~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~- 176 (946)
++++.+++++ |. ++.++.+++|+|.+++.++.++. . +||+|+++...|+.+...++ ..|.+++.++.
T Consensus 122 ~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~-~--~Gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~ 194 (448)
T 3aow_A 122 PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFL-N--PGDIVVVEAPTYLAALQAFN----FYEPQYIQIPLD 194 (448)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHC-C--TTCEEEEEESCCHHHHHHHH----TTCCEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHc-C--CCCEEEEeCCChHHHHHHHH----HcCCEEEEeccC
Confidence 4556777777 98 67789999999988887766652 3 78999999999999887764 46788777654
Q ss_pred ------ccccc-cC----C--CEeEEE-EEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-----CCCC
Q 002263 177 ------KDIDY-KS----G--DVCGVL-VQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KPPG 233 (946)
Q Consensus 177 ------~~l~~-i~----~--~t~~v~-v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~ 233 (946)
++|++ ++ + ++++|+ +.+| |.+|.+.+ +++|.++|+++|+++++| +..+.... .+..
T Consensus 195 ~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~D-e~y~~~~~~g~~~~~~~ 273 (448)
T 3aow_A 195 DEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVED-DPYGELRYSGNPEKKIK 273 (448)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE-CSCTTCBCSSCCCCCTG
T ss_pred CCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEE-CCCccccCCCCCCcCHH
Confidence 45655 55 4 789885 5676 67998875 679999999999999994 33332211 1111
Q ss_pred ---CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCcc
Q 002263 234 ---ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 309 (946)
Q Consensus 234 ---~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~ 309 (946)
..|.+++++|. |.|+ | |--+|++++++++++.+... +... ..+
T Consensus 274 ~~~~~~~vi~~~S~SK~~~-~----GlriG~v~~~~~l~~~l~~~--------------------------~~~~--~~~ 320 (448)
T 3aow_A 274 ALDNEGRVIYLGTFSKILA-P----GFRIGWMVGDPGIIRKMEIA--------------------------KQST--DLC 320 (448)
T ss_dssp GGCTTSCEEEEEESTTTTC-G----GGCCEEEEECHHHHHHHHHH--------------------------HHHH--HSS
T ss_pred hcCCCCCEEEEccchhhcc-c----cccEEEEEeCHHHHHHHHHH--------------------------HHHh--cCC
Confidence 23567888887 8764 2 11269999998877655100 0000 111
Q ss_pred chHHHHHHHHHHHHHHhC--hhhHHHHHHHHHHHHHHHHHHHhcC-C-CEEEcCCCCcCeEEEecCC---HHHHHHHHHH
Q 002263 310 TAQALLANMAAMYAVYHG--PEGLKTIAQRVHGLAGTFALGLKKL-G-TVEVQGLPFFDTVKVKCAD---AHAIASAAYK 382 (946)
Q Consensus 310 t~~~l~a~~aa~y~~~~g--~~Gl~~i~~~~~~~a~~l~~~L~~~-g-~~~~~~~~~~~~~~i~~~~---~~~v~~~L~~ 382 (946)
++......++. ++. .+ .+.++++.++..++.+++.+.|++. + ++++.......-+.+.++. ..++.++|.+
T Consensus 321 ~~~~~q~a~~~-~L~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~ 398 (448)
T 3aow_A 321 TNVFGQVVAWR-YVD-GGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIK 398 (448)
T ss_dssp CCHHHHHHHHH-HHH-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHH-HHH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHHHHHHH
Confidence 11111111111 122 12 2446777788888899999999874 2 3776532211224455542 7789999999
Q ss_pred cCCeeeee--------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 383 IEMNLRVV--------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 383 ~GI~~~~~--------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+||.+..- .++.+|+|++.. ++++|+++++.|+.
T Consensus 399 ~gV~v~pg~~f~~~~~~~~~iRls~~~~-~~e~i~~~~~~L~~ 440 (448)
T 3aow_A 399 KGVAYVPGEAFYAHRDVKNTMRLNFTYV-DEDKIMEGIKRLAE 440 (448)
T ss_dssp TTEECEEGGGGSTTCCCCSEEEEECSSS-CTHHHHHHHHHHHH
T ss_pred CCcEEEcchhhcCCCCCCCEEEEEeCCC-CHHHHHHHHHHHHH
Confidence 99987541 246899999864 89999999999874
No 382
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.32 E-value=3.4e-16 Score=178.42 Aligned_cols=299 Identities=12% Similarity=0.113 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHhhCC--Cccc-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEc
Q 002263 520 EMFNNLGEWLCTITGF--DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 596 (946)
Q Consensus 520 ~~~~el~~~la~l~G~--~~~~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~ 596 (946)
++..++.+++.+.+|. +... +..++|+++..++ ++.+. . ++++|+++...|..+...+...|.+++.++
T Consensus 70 ~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~---~~~~~-~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~ 141 (392)
T 3b1d_A 70 ELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIA---IQAFT-K----EGEAVLINSPVYPPFARSVRLNNRKLVSNS 141 (392)
Confidence 3444555666666663 3333 3444445444333 33321 1 457899988888777777888999999999
Q ss_pred CC-CC--CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--ccCC
Q 002263 597 TD-AK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--LTSP 667 (946)
Q Consensus 597 ~~-~~--g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~a-~~g--l~~p 667 (946)
.+ ++ +.+|+++|++++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|+++... ..+ ....
T Consensus 142 ~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~ 219 (392)
T 3b1d_A 142 LKEENGLFQIDFEQLENDIVE--NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSF 219 (392)
Confidence 85 33 35899999999963 467888888884 688874 25999999999999999999986421 111 0011
Q ss_pred C----c-cCCCEEEeCCCcccccCCCCCCCcceeEEEec-ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHH
Q 002263 668 G----Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 741 (946)
Q Consensus 668 g----~-~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~ 741 (946)
. + .+.++++.+++|+|+. +|.++|++.+++ .+.+.+.... ....+++. + ....
T Consensus 220 ~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~----~~~~ 278 (392)
T 3b1d_A 220 NTVSPDFKDFALVLSSATKTFNI----AGTKNSYAIIENPTLCAQFKHQQ-----------LVNNHHEV--S----SLGY 278 (392)
Confidence 1 1 3445777889999853 467889998865 3665543210 00000111 1 1111
Q ss_pred HHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCC
Q 002263 742 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 819 (946)
Q Consensus 742 ~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~-~~~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~G 819 (946)
.++.+.+. .+.+.+.+..++...+.+++.+.|++ ...+.+..+.+.++ ++++++. .+.+..++.++|. ++|
T Consensus 279 ~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~--~~i~~~~----~~~~~~~l~~~l~~~~g 351 (392)
T 3b1d_A 279 IATETAYR-YGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYL--IWLDFSD----YGLTDDALFTLLHDQAK 351 (392)
Confidence 12223333 23445566666666778888888876 31222111122221 2245431 1245678999996 789
Q ss_pred cccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 820 FHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 820 i~~~~~-~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
+.+... .|. .++++||+++. ++++|+++++.|.++++
T Consensus 352 i~v~~g~~f~~~~~~~iRi~~~~--~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 352 VILNRGSDYGSEGELHARLNIAA--PKSLVEEICKRIVCCLP 391 (392)
Confidence 986432 232 24689999764 57889999998887654
No 383
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.55 E-value=4.8e-14 Score=160.94 Aligned_cols=300 Identities=12% Similarity=0.071 Sum_probs=174.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ccccc---CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCC
Q 002263 516 QGYQEMFNNLGEWLCTITGFD--SFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 590 (946)
Q Consensus 516 qG~~~~~~el~~~la~l~G~~--~~~l~---~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~ 590 (946)
+|..++...+.+++.+-.|.+ ...+. +++|+++...++.+++.+. .++++|+++.+.|..+...++..|.
T Consensus 71 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~-----~~gd~Vlv~~p~~~~~~~~~~~~g~ 145 (401)
T 7aat_A 71 AGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFF-----KFSRDVYLPKPSWGNHTPIFRDAGL 145 (401)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHC-----TTCCEEEEEESCCTTHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhc-----cCCCEEEEcCCCchhHHHHHHHcCC
Confidence 465555545555554433422 22322 4555555543333333221 2468899999999888888999999
Q ss_pred EEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccc-ccccc
Q 002263 591 KIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL 664 (946)
Q Consensus 591 ~vv~v~~~~--~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~gl 664 (946)
+++.+|+++ ++.+|++++++.+++..++++++++++|| .+|.+- .++++|+++|++||+++++|.++.. ...+.
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 225 (401)
T 7aat_A 146 QLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDI 225 (401)
T ss_dssp EEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCH
T ss_pred eeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCc
Confidence 999999853 58899999999987655788999999994 688664 2589999999999999999998531 11111
Q ss_pred --cC------CCccCCCEEEeCCCcccccCCCCCCCcceeEEEe---cccCCCCCCCccccCCCCCCCCCCCCCCCcccC
Q 002263 665 --TS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 733 (946)
Q Consensus 665 --~~------pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~---~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~ 733 (946)
.. .....-.+++.++||+|+. .|.++|++.+. +.....+-...... .... ..+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~RiG~l~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~~ 291 (401)
T 7aat_A 226 NRDAWALRHFIEQGIDVVLSQSYAKNMGL----YGERAGAFTVICRDAEEAKRVESQLKIL--------IRPM--YSNPP 291 (401)
T ss_dssp HHHTHHHHHHHHTTCCCEEEEECTTTSCC----GGGCEEEEEEECSSHHHHHHHHHHHHHH--------HHHH--HSSCC
T ss_pred cccHHHHHHHHhcCCcEEEEecCCccccc----ccCceEEEEEEeCCHHHHHHHHHHHHHH--------HHhc--cCCCC
Confidence 00 0112345778889999864 36779998862 22111110000000 0000 11111
Q ss_pred ccchhhHHHHHHHHHHH--H-c--HhhHHHHHHHHHHHHHHHHHHHhcc-CC--eeeccCCCceeeeEEEecccccccCC
Q 002263 734 PWGSALILPISYTYIAM--M-G--SKGLTEASKIAILNANYMAKRLEKH-YP--ILFRGVNGTVAHEFIVDLRGLKNTAG 805 (946)
Q Consensus 734 ~~g~~~~~~~a~a~l~~--l-G--~eGl~~~~~~~~~~a~~l~~~L~~~-~~--v~~~~~~~~~~~e~v~~~~~~~~~~g 805 (946)
......+..++.. + . .+.+.+..++...+.++|.+.|++. .. +.+..+++.+ +++ . +
T Consensus 292 ----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~---~~~--~------~ 356 (401)
T 7aat_A 292 ----MNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGM---FCF--T------G 356 (401)
T ss_dssp ----HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSS---EEE--C------C
T ss_pred ----hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcce---EEe--c------C
Confidence 1111111112210 0 0 2234555566677888999999875 11 2111112222 222 1 2
Q ss_pred CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 002263 806 IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 857 (946)
Q Consensus 806 ~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~ 857 (946)
.+.+.+...|.++||.+. ..+||++...+ .++||+++++|++++
T Consensus 357 ~~~~~~~~ll~~~gi~v~-------~~~Ris~~~~~-~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 357 LKPEQVERLTKEFSIYMT-------KDGRISVAGVA-SSNVGYLAHAIHQVT 400 (401)
T ss_dssp CCHHHHHHHHHHHCEECC-------TTCEEEGGGCC-TTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEecc-------CCCeEEeccCC-hhhHHHHHHHHHHHh
Confidence 345555444567899874 23699987654 455999999998764
No 384
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.55 E-value=1.5e-12 Score=151.31 Aligned_cols=295 Identities=14% Similarity=0.142 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCCCHHHHHH----------
Q 002263 520 EMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAM---------- 587 (946)
Q Consensus 520 ~~~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~-~saHg~~~~~a~~---------- 587 (946)
+...++.++++++++ .+. .+..++|+++.++++.++|.+. ++++||+. .+.||........
T Consensus 97 ~~~~~la~~l~~~~~~~~~-v~~~~gg~eA~~~al~~ar~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 169 (453)
T 2cy8_A 97 PLEVRWAERIVAAFPSIRK-LRFTGSGTETTLLALRVARAFT------GRRMILRFEGHYHGWHDFSASGYNSHFDGQPA 169 (453)
T ss_dssp HHHHHHHHHHHHHCTTCSE-EEEESCHHHHHHHHHHHHHHHH------CCCEEEEECC----------------------
T ss_pred HHHHHHHHHHHhhCCCCCE-EEEeCCHHHHHHHHHHHHHHhh------CCCEEEEEcCCcCCCchhhHhhcCCccCCCcC
Confidence 445678888888875 332 3566788887766666655442 23456654 4677655443221
Q ss_pred cCCE------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CcccccccC----HHHHHHHHHHcCCEEEEecc
Q 002263 588 CGMK------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGA 656 (946)
Q Consensus 588 ~G~~------vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~~~----i~~I~~ia~~~g~ll~vD~a 656 (946)
.|+. ++.++. .|+++|+++++++.+++++|+++.. +.+|++. + +++|.++|++||+++++|++
T Consensus 170 ~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~-~~~~~l~~l~~l~~~~g~~lI~DEv 243 (453)
T 2cy8_A 170 PGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFIAEPVGSHFGVTP-VSDSFLREGAELARQYGALFILDEV 243 (453)
T ss_dssp ------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEE-CCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEecC
Confidence 2432 344443 4899999999754457777766543 3478765 4 99999999999999999998
Q ss_pred cccccccccCCC------c--cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCC
Q 002263 657 NMNAQVGLTSPG------Y--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 728 (946)
Q Consensus 657 ~~~a~~gl~~pg------~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~ 728 (946)
+. ++ +.+ . ..+|++++ +|+|+ +|.++|++++++++.+.+.....+ .....+
T Consensus 244 ~~----g~-~~g~~~~~~~~~~~~di~s~--sK~l~-----~G~~~G~v~~~~~~~~~l~~~~~~---------~~~~~~ 302 (453)
T 2cy8_A 244 IS----GF-RVGNHGMQALLDVQPDLTCL--AKASA-----GGLPGGILGGREDVMGVLSRGSDR---------KVLHQG 302 (453)
T ss_dssp TT----TT-TTCTTHHHHHHTCCCSEEEE--EGGGG-----TTSSCEEEEECHHHHTTSSSCC-----------------
T ss_pred cc----cc-ccCchhhhHHhCCCCcEEEE--Chhhh-----CCcceEEEechHHHHHHhccccCC---------CceeCC
Confidence 64 33 221 1 23688755 59884 357799999998877655321000 000001
Q ss_pred CcccCccchhhHHHHHHHHHHH-HcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeeEEEeccc---
Q 002263 729 TIAAAPWGSALILPISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG--- 799 (946)
Q Consensus 729 ~i~~~~~g~~~~~~~a~a~l~~-lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~--~~~~~~~~~~e~v~~~~~--- 799 (946)
+.+ ++...++++.+.+.. + .+++. ++...+.+++.++|++. +.+. .++ .+.+ +.+++..
T Consensus 303 t~~----~n~~~~aa~~aal~~~~-~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~i~~~~~~~ 370 (453)
T 2cy8_A 303 TFT----GNPITAAAAIAAIDTIL-EDDVC---AKINDLGQFAREAMNHLFARKGLNWLAYG-RFSG---FHLMPGLPPN 370 (453)
T ss_dssp -CC----CCHHHHHHHHHHHHHHH-HTTHH---HHHHHHHHHHHHHHHHHHHHTTCCEEEEC-CTTE---EEEEETSCTT
T ss_pred CCC----CCHHHHHHHHHHHHHHh-hhhHH---HHHHHHHHHHHHHHHHHHhhCCCcEEEEE-eeeE---EEEEEecccc
Confidence 112 234444455566665 5 45443 34456777888888653 2321 222 2333 3444431
Q ss_pred --c------cc---cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 002263 800 --L------KN---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKA 868 (946)
Q Consensus 800 --~------~~---~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~~~~~~~ 868 (946)
. .. .......++.++|.++|+.+. | .+.++ ++...|++|+++++++|+++++++.+ +|.+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~----~-~~~~~--l~~~~t~~~i~~~l~~l~~~l~~~~~--~~~~ 441 (453)
T 2cy8_A 371 TTDTGSITRAEVARPDVKMIAAMRMALILEGVDIG----G-RGSVF--LSAQHEREHVEHLVTTFDRVLDRLAD--ENLL 441 (453)
T ss_dssp CCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECB----T-TTEEE--CCTTCCHHHHHHHHHHHHHHHHHHHH--TTCC
T ss_pred ccccccccccccccccHHHHHHHHHHHHHCCeEEe----C-CCCEE--eeccCCHHHHHHHHHHHHHHHHHHHh--CCCc
Confidence 0 00 000125689999999999874 2 13455 45678999999999999999988765 4554
Q ss_pred C
Q 002263 869 D 869 (946)
Q Consensus 869 ~ 869 (946)
+
T Consensus 442 ~ 442 (453)
T 2cy8_A 442 S 442 (453)
T ss_dssp C
T ss_pred c
Confidence 3
No 385
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.55 E-value=4.4e-13 Score=153.00 Aligned_cols=276 Identities=14% Similarity=0.099 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc----c-CCCCEEEEcCCCC-HHHHHHHHHhh--------c
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ----K-GKKKTFIIASNCH-PQTIDICITRA--------D 165 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~----~-~~gd~vvv~~~~H-ps~~~~~~~~a--------~ 165 (946)
...++++.+++++|.+ ++.++++||.+++.++.+++.. . ..+++||+.+..| ......+.... .
T Consensus 82 ~~~~l~~~la~~~~~~--~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~ 159 (406)
T 4adb_A 82 PVLRLAKKLIDATFAD--RVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFA 159 (406)
T ss_dssp HHHHHHHHHHHHSSCS--EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGC
T ss_pred HHHHHHHHHHhhCCCC--eEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCC
Confidence 3456778999999876 6889999998888776554310 0 1347888777555 44333332211 0
Q ss_pred CCCeEEEEe---ccccccc-cCCCEeEEEEEcC-CCcee-----ecchHHHHHHHHhCCcEEEEEecCc-cccCCCCC--
Q 002263 166 GFDIKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGE-----VLDYGDFIKNAHANGVKVVMATDLL-ALTILKPP-- 232 (946)
Q Consensus 166 ~~gi~v~~~---~~~~l~~-i~~~t~~v~v~~p-n~~G~-----i~di~~i~~~a~~~gal~~v~a~~~-al~~l~~~-- 232 (946)
..+..+..+ |+++|++ +++++++|+++ | |.+|. ..++++|.++|+++|+++++|. .. .++....+
T Consensus 160 ~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De-~~~~~~~~g~~~~ 237 (406)
T 4adb_A 160 PLPADIRHAAYNDINSASALIDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDE-VQTGVGRTGELYA 237 (406)
T ss_dssp SCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEEC-TTTTTTTTSSSSH
T ss_pred CCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEec-cccCCCccchhHH
Confidence 112344444 4456666 77889999998 6 55553 3489999999999999999953 33 23221111
Q ss_pred ---CCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCcc
Q 002263 233 ---GELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 309 (946)
Q Consensus 233 ---~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~ 309 (946)
.....|+++. +|.|+ | |-.+|++++++++.+.+.... ...|.+..
T Consensus 238 ~~~~~~~~d~~t~-sK~~~-~----G~r~G~~~~~~~~~~~~~~~~--------------------------~~~~~~~~ 285 (406)
T 4adb_A 238 YMHYGVTPDLLTT-AKALG-G----GFPVGALLATEECARVMTVGT--------------------------HGTTYGGN 285 (406)
T ss_dssp HHHHTCCCSEEEE-CGGGG-T----TSCCEEEEECHHHHHTCCTTS--------------------------SCCSSTTC
T ss_pred HHhcCCCCCEEEe-chhhc-C----CCCeEEEEEcHHHHhhhccCC--------------------------cCCCCCCC
Confidence 1234688754 68885 2 334789999998887763210 00111111
Q ss_pred chHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC-EEEcC--CCCcCeEEEecC-----CHHHHHHHHH
Q 002263 310 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT-VEVQG--LPFFDTVKVKCA-----DAHAIASAAY 381 (946)
Q Consensus 310 t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~-~~~~~--~~~~~~~~i~~~-----~~~~v~~~L~ 381 (946)
.....+..++ +..+.. +++.++..++.+++++.|++++. +.+.. ......+.+.++ ...++.+.|.
T Consensus 286 -~~~~~a~~~~--l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 359 (406)
T 4adb_A 286 -PLASAVAGKV--LELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAA 359 (406)
T ss_dssp -HHHHHHHHHH--HHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHH
T ss_pred -HHHHHHHHHH--HHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHH
Confidence 1112222222 233332 56777888888999998887530 11110 001112333332 2778999999
Q ss_pred HcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 382 KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 382 ~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++||.++...++.+|++++..+|++|+++++++|..
T Consensus 360 ~~gi~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 395 (406)
T 4adb_A 360 KAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAA 395 (406)
T ss_dssp HTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HCCcEEeecCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 999999876678999999999999999999999974
No 386
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.54 E-value=1.5e-13 Score=158.38 Aligned_cols=272 Identities=13% Similarity=0.021 Sum_probs=178.8
Q ss_pred HHHHHHHHHh----C---CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec
Q 002263 103 NFQTMIADLT----G---LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 175 (946)
Q Consensus 103 e~q~~la~L~----g---~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~ 175 (946)
++++.+|+++ | .++.++.+++|+|.++++++.++. . +||+|+++...|+.+...++ ..|.+++.++
T Consensus 89 ~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~-~--~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~ 161 (425)
T 1vp4_A 89 VLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFL-D--DESYCVLDDPAYLGAINAFR----QYLANFVVVP 161 (425)
T ss_dssp HHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHC-C--TTCEEEEEESCCHHHHHHHH----TTTCEEEEEE
T ss_pred HHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhC-C--CCCEEEEeCCCcHHHHHHHH----HcCCEEEEec
Confidence 4556677777 9 556788899999988887776652 2 78999999999999887754 4677877765
Q ss_pred c-------ccccc-cCC--------CEeEEE-EEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-C---
Q 002263 176 L-------KDIDY-KSG--------DVCGVL-VQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-K--- 230 (946)
Q Consensus 176 ~-------~~l~~-i~~--------~t~~v~-v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-~--- 230 (946)
. ++|++ +++ ++++|+ +.+| |.+|.+.+ +++|+++|+++|+++++|. ..+.... .
T Consensus 162 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~ 240 (425)
T 1vp4_A 162 LEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDD-PYGALRYEGETV 240 (425)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-SSTTCBCSSCCC
T ss_pred cCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEC-CCccccCCCCCC
Confidence 4 44555 543 788885 5677 67998875 6789999999999999943 3222111 1
Q ss_pred -CCC---CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccC
Q 002263 231 -PPG---ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 305 (946)
Q Consensus 231 -~~~---~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aT 305 (946)
+.. ..+.+++++|. |.|+ | |-.+|++++++++++.+... .. ....+
T Consensus 241 ~~~~~~~~~~~~i~~~s~sK~~~-~----G~r~G~~~~~~~~~~~l~~~----------~~--------------~~~~~ 291 (425)
T 1vp4_A 241 DPIFKIGGPERVVLLNTFSKVLA-P----GLRIGMVAGSKEFIRKIVQA----------KQ--------------SADLC 291 (425)
T ss_dssp CCHHHHHCTTTEEEEEESTTTTC-G----GGCEEEEECCHHHHHHHHHH----------HH--------------HHHSS
T ss_pred cCHHHhCCCCCEEEEeccccccc-c----ccceEEEeeCHHHHHHHHHH----------hh--------------hhcCC
Confidence 111 23567888887 7764 2 22369999998877655100 00 00011
Q ss_pred CCccchHHHHHHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcC-C---CEEEcCCCCcCeEEEecCC---HHHHH
Q 002263 306 SNICTAQALLANMAAMYAVYHG-PEGLKTIAQRVHGLAGTFALGLKKL-G---TVEVQGLPFFDTVKVKCAD---AHAIA 377 (946)
Q Consensus 306 sni~t~~~l~a~~aa~y~~~~g-~~Gl~~i~~~~~~~a~~l~~~L~~~-g---~~~~~~~~~~~~~~i~~~~---~~~v~ 377 (946)
.|. ....+..++ +.... .+.++++.++..++.+++.+.|++. + ++++..+....-+.+.++. +.++.
T Consensus 292 ~~~---~~~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~ 366 (425)
T 1vp4_A 292 SPA---ITHRLAARY--LERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMF 366 (425)
T ss_dssp CCH---HHHHHHHHH--HHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTH
T ss_pred CCH---HHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCHHHHH
Confidence 111 112122222 22211 3456778888888999999999875 1 3777633222234455542 66788
Q ss_pred HHHHHcCCeeeee--------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 378 SAAYKIEMNLRVV--------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 378 ~~L~~~GI~~~~~--------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.|.++||.+... .++.+|+|++.. +++|+++++++|..
T Consensus 367 ~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~ 413 (425)
T 1vp4_A 367 EYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRLRE 413 (425)
T ss_dssp HHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHH
Confidence 9999889988642 247899999875 89999999999974
No 387
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.54 E-value=1.9e-14 Score=163.81 Aligned_cols=268 Identities=9% Similarity=0.068 Sum_probs=164.2
Q ss_pred CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC--CCCCCCHHHHHHHHHhcCCCe
Q 002263 542 PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--AKGNINIEELRKAAEANRDNL 619 (946)
Q Consensus 542 ~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~--~~g~~D~e~L~~~i~~~~~~t 619 (946)
+++|+++...++.+++.+ .++++|+++...|..+...+...|.+++.+|.+ +++.+|+++|+++++++.+++
T Consensus 100 ~~g~~~a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 173 (396)
T 2q7w_A 100 TPGGTGALRVAADFLAKN------TSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGD 173 (396)
T ss_dssp ESHHHHHHHHHHHHHHHH------SCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTC
T ss_pred cccchhhHHHHHHHHHHh------CCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCC
Confidence 566666664444333321 145789998888877777788899999999985 457799999999997543468
Q ss_pred EEEEEeCCC-cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc---ccCC---CccC-CCEEEeCCCcccccCCC
Q 002263 620 STLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG---LTSP---GYIG-ADVCHLNLHKTFCIPHG 688 (946)
Q Consensus 620 ~~vvvt~Pn-~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~g---l~~p---g~~G-aDi~~~s~hK~f~~P~g 688 (946)
+++++++|+ .+|.+. .++++|+++|+++|+++++|+++.. ..++ .... ...+ -++++.+++|+|+.
T Consensus 174 ~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--- 250 (396)
T 2q7w_A 174 VVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGL--- 250 (396)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTC---
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccc---
Confidence 888889985 688874 2578999999999999999998632 1110 0000 1122 34667889998853
Q ss_pred CCCCcceeEEE---ec----ccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH-----cHhhH
Q 002263 689 GGGPGMGPIGV---KK----HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM-----GSKGL 756 (946)
Q Consensus 689 ~GGPg~G~i~~---~~----~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~l-----G~eGl 756 (946)
.|.++|++++ ++ ++.+.+... . + .+ ..+++ .....++.++|... -.+.+
T Consensus 251 -~G~riG~~~~~~~~~~~~~~~~~~~~~~---~--------~--~~-~~~~~----~~~~~a~~~~l~~~~l~~~~~~~~ 311 (396)
T 2q7w_A 251 -YNERVGACTLVAADSETVDRAFSQMKAA---I--------R--AN-YSNPP----AHGASVVATILSNDALRAIWEQEL 311 (396)
T ss_dssp -GGGCCEEEEEECSSHHHHHHHHHHHHHH---H--------H--TT-TSSCC----HHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred -cccccceEEEEcCCHHHHHHHHHHHHHH---H--------h--hc-cCCCC----cHHHHHHHHHhcChhhHHHHHHHH
Confidence 3566899986 43 233221100 0 0 00 00111 11112222232211 02345
Q ss_pred HHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEE
Q 002263 757 TEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 833 (946)
Q Consensus 757 ~~~~~~~~~~a~~l~~~L~~~~---~v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~l 833 (946)
++..++...+.+++.+.|++.. .+.+..+.+..+ +.++ .+...+.+.|.++|+.+.. .+
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~l~~~gv~v~~-------~~ 373 (396)
T 2q7w_A 312 TDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMF--SFSG---------LTKEQVLRLREEFGVYAVA-------SG 373 (396)
T ss_dssp HHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSE--EECC---------CCHHHHHHHHHHHCEECCT-------TC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceE--EEec---------CCHHHHHHHHHhcCeeecC-------Cc
Confidence 5566666778889999998752 132111122221 2222 2345677777789998741 36
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHH
Q 002263 834 MIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 834 ri~~t~~~t~~eid~~~~aL~~i 856 (946)
||++... |++++++++++|+++
T Consensus 374 Ris~~~~-~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 374 RVNVAGM-TPDNMAPLCEAIVAV 395 (396)
T ss_dssp EEEGGGC-CTTTHHHHHHHHHHH
T ss_pred eEEEeec-CHHHHHHHHHHHHhc
Confidence 9999753 889999999999875
No 388
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.54 E-value=1.1e-12 Score=148.97 Aligned_cols=302 Identities=12% Similarity=0.089 Sum_probs=188.7
Q ss_pred CCCCCCCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHH-HHHHHHHHh----C--CCCcceEEcccHHHHHHH
Q 002263 60 GMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLN-FQTMIADLT----G--LPMSNASLLDEGTAAAEA 131 (946)
Q Consensus 60 G~g~~~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e-~q~~la~L~----g--~~~~~~sl~~~~Ta~~ea 131 (946)
+.|..+...|+.+.+.+.+... -...|.+. ..+ +++.+|+++ | .++.++.+++|+|.++++
T Consensus 34 ~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----------~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~ 102 (390)
T 1d2f_A 34 TISDMDFATAPCIIEALNQRLMHGVFGYSRW-----------KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE 102 (390)
T ss_dssp CSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS-----------CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHH
T ss_pred eecCCCCCCCHHHHHHHHHHHhCCCCCCCCC-----------ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHH
Confidence 5555555567777655543211 01233321 122 445555554 6 566789999999988887
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-----------ccccc-cCC-CEeEEEEEcC-CCc
Q 002263 132 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSG-DVCGVLVQYP-GTE 197 (946)
Q Consensus 132 ~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-----------~~l~~-i~~-~t~~v~v~~p-n~~ 197 (946)
++.++. . +||+|+++...|+++...++. .|.+++.++. ++|++ +.+ ++++|++++| |.+
T Consensus 103 ~~~~l~-~--~gd~vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~npt 175 (390)
T 1d2f_A 103 LIRQWS-E--TGEGVVIHTPAYDAFYKAIEG----NQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPT 175 (390)
T ss_dssp HHHHSS-C--TTCEEEEEESCCHHHHHHHHH----TTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTT
T ss_pred HHHHhc-C--CCCEEEEcCCCcHHHHHHHHH----CCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCC
Confidence 776653 2 789999999999998877643 4777776654 33445 554 7999998888 669
Q ss_pred eeecc---hHHHHHHHHhCCcEEEEEecCccccCC-----CCCCCcc---ceEEEecc-ccccccCCCCCCceEEEEEc-
Q 002263 198 GEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELG---ADIVVGSA-QRFGVPMGYGGPHAAFLATS- 264 (946)
Q Consensus 198 G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-----~~~~~~G---aDi~v~s~-k~lg~P~~~GGP~~g~l~~~- 264 (946)
|.+.| +++|+++|+++|+++++|. ..+.... .+...++ .|+ +.|. |.|+.| |..+|+++++
T Consensus 176 G~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~----G~r~G~~~~~~ 249 (390)
T 1d2f_A 176 GKVWTCDELEIMADLCERHGVRVISDE-IHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIP----ALTGAYGIIEN 249 (390)
T ss_dssp CCCCCTTHHHHHHHHHHHTTCEEEEEC-TTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCG----GGCCEEEEECS
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEEEc-cccccccCCCCCcCHHHcchhhHhh-ccCccHhhccc----ChhheEEEECC
Confidence 99876 8999999999999999943 3222111 1111232 277 7777 887532 3346899985
Q ss_pred hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHH
Q 002263 265 QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGT 344 (946)
Q Consensus 265 ~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~ 344 (946)
+++.+.+..... + ...-+|.|. ....+..+++ . .+.+.++++.++..++.++
T Consensus 250 ~~~~~~~~~~~~-------~---------------~~~~~~~~~---~~~~a~~~~l--~-~~~~~~~~~~~~~~~~~~~ 301 (390)
T 1d2f_A 250 SSSRDAYLSALK-------G---------------RDGLSSPSV---LALTAHIAAY--Q-QGAPWLDALRIYLKDNLTY 301 (390)
T ss_dssp HHHHHHHHHHHH-------T---------------TSCCCSCCH---HHHHHHHHHH--H-HCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-------h---------------hcccCCCCH---HHHHHHHHHH--h-cCHHHHHHHHHHHHHHHHH
Confidence 566554410000 0 000012222 1222222222 2 2455678888899999999
Q ss_pred HHHHHhc-CCCEEEcCCCCcCe-EEEecC----CHHHHHHHHH-HcCCeeeee------cCCeEEEEeccCCCHHHHHHH
Q 002263 345 FALGLKK-LGTVEVQGLPFFDT-VKVKCA----DAHAIASAAY-KIEMNLRVV------DSNTVTASFDETTTLEDVDKL 411 (946)
Q Consensus 345 l~~~L~~-~g~~~~~~~~~~~~-~~i~~~----~~~~v~~~L~-~~GI~~~~~------~~~~lris~~~~~t~edid~l 411 (946)
+.+.|++ ++++++.... ... +.+.++ ++.++.+.|. ++||.+... .++.+|+|++. +++++++.
T Consensus 302 l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~ 378 (390)
T 1d2f_A 302 IADKMNAAFPELNWQIPQ-STYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKG 378 (390)
T ss_dssp HHHHHHHHCSSCCCCCCS-BCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHH
T ss_pred HHHHHHhhCCCCEEecCC-ccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHH
Confidence 9999988 6337655321 111 224443 2778999998 579988642 24789999986 47889988
Q ss_pred HHHHh
Q 002263 412 FIVFA 416 (946)
Q Consensus 412 l~~l~ 416 (946)
++.|.
T Consensus 379 l~~l~ 383 (390)
T 1d2f_A 379 VAGLI 383 (390)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88886
No 389
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.53 E-value=5.3e-13 Score=153.83 Aligned_cols=276 Identities=11% Similarity=0.068 Sum_probs=181.5
Q ss_pred HHHHHHHHHh-----CCCCcc---eEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcC-CCeEEEE
Q 002263 103 NFQTMIADLT-----GLPMSN---ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADG-FDIKVVV 173 (946)
Q Consensus 103 e~q~~la~L~-----g~~~~~---~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~-~gi~v~~ 173 (946)
++++.+|+++ +.++.+ +.+++|+|.+++.++.++. . +||+|+++...|+.+...+ +. .|.+++.
T Consensus 92 ~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~--~gd~Vl~~~p~y~~~~~~~----~~~~g~~~~~ 164 (430)
T 2x5f_A 92 ELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFV-N--QDDTILLPEHNWGNYKLVF----NTRNGANLQT 164 (430)
T ss_dssp HHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHC-C--TTCEEEEESSCCTHHHHHH----TTTTCCEEEE
T ss_pred HHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHh-C--CCCEEEEcCCcCccHHHHH----HHhcCCeEEE
Confidence 4667888888 888888 8899999988887776652 2 7899999999999887664 34 6888887
Q ss_pred eccc---------cccc-cCC---CEeEEEEEcC-CCceeecc---hHHHHHHHHh-----CCcEEEEEecCccccCC-C
Q 002263 174 SDLK---------DIDY-KSG---DVCGVLVQYP-GTEGEVLD---YGDFIKNAHA-----NGVKVVMATDLLALTIL-K 230 (946)
Q Consensus 174 ~~~~---------~l~~-i~~---~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~-----~gal~~v~a~~~al~~l-~ 230 (946)
++.+ ++++ +++ ++++|++.+| |.+|.+.| +++|+++|++ +|+++++|. ..+.... .
T Consensus 165 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De-~~~~~~~~~ 243 (430)
T 2x5f_A 165 YPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDD-AYYGLFYED 243 (430)
T ss_dssp ECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEEC-TTTTCBCSS
T ss_pred EeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEeh-hcccccCCc
Confidence 7652 3344 444 7999999998 67999987 8999999999 999999953 3221111 0
Q ss_pred ---CC-C-C----ccc---eEEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEeccc
Q 002263 231 ---PP-G-E----LGA---DIVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 294 (946)
Q Consensus 231 ---~~-~-~----~Ga---Di~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~t 294 (946)
.+ . . .+. +++++|. |.|+.| |-.+|++++ ++++.+.+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~riG~~~~~~~~~~~~~~l~~~-------------------- 299 (430)
T 2x5f_A 244 VYTQSLFTALTNLHSNAILPIRLDGATKEFFAW----GFRVGFMTFGTSDQTTKEVLEAK-------------------- 299 (430)
T ss_dssp SCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCG----GGCCEEEEEBCCCHHHHHHHHHH--------------------
T ss_pred ccchHHHHHHhhccCCcceEEEEEecccCCCCC----CCCeEEEEEecCCHHHHHHHHHH--------------------
Confidence 11 1 1 344 6778887 877532 223699999 87776655110
Q ss_pred ccccccccccCCCccchHHHHHHHHHHHHH-Hh-ChhhHHHHHHHHHHHHHHHHHHHh----cCCCEEEcCCCCcCeEEE
Q 002263 295 REQHIRRDKATSNICTAQALLANMAAMYAV-YH-GPEGLKTIAQRVHGLAGTFALGLK----KLGTVEVQGLPFFDTVKV 368 (946)
Q Consensus 295 re~~irre~aTsni~t~~~l~a~~aa~y~~-~~-g~~Gl~~i~~~~~~~a~~l~~~L~----~~g~~~~~~~~~~~~~~i 368 (946)
+ ....|. .+.+. +.....+..+++ . .. -.+.++++.++..++.+++.+.|+ +.| +++......--+.+
T Consensus 300 ~-~~~~~~-~~~~~-~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~~~g~~~~~ 373 (430)
T 2x5f_A 300 V-KGLIRS-NISSG-PLPTQSAVKHVL--KNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-WQAYDFNSGYFMAI 373 (430)
T ss_dssp H-HHHHHT-TTSSC-CHHHHHHHHHHH--HSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-EEECCCCBSSEEEE
T ss_pred H-hhhhhc-ccCCC-ChHHHHHHHHHH--ccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ceeeCCCceEEEEe
Confidence 0 000110 11111 111121222221 2 10 022345588888899999999998 667 88764321111334
Q ss_pred ecCC--HHHHHHHHHH-cCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 369 KCAD--AHAIASAAYK-IEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 369 ~~~~--~~~v~~~L~~-~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+++ ..++.++|.+ +||.+..-.++.+|+|++. ++++|++++++.|..
T Consensus 374 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~ 424 (430)
T 2x5f_A 374 KVHDVDPEALRKHLIDKYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSIAK 424 (430)
T ss_dssp EESSSCHHHHHHHHHHHHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHHHH
Confidence 4443 7889999998 8999876446789999996 599999999999863
No 390
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.53 E-value=1.5e-12 Score=148.68 Aligned_cols=328 Identities=13% Similarity=0.071 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHhcC--CcceeecCCCCCCCCCcHHHHHHHHhCC------ccccccCCChhhhhhhHHHHHHHHHHHHHH
Q 002263 39 SQMIEHMQKLASMN--KVYKSFIGMGYYNTHVPPVILRNIMENP------AWYTQYTPYQAEIAQGRLESLLNFQTMIAD 110 (946)
Q Consensus 39 ~e~~~~~~~l~~~n--~~~~~~~G~g~~~~~~p~~i~~~i~~~~------~~~t~~~pyq~e~sqg~l~~l~e~q~~la~ 110 (946)
.++.+.+..+..++ ..+.+ ++.|.++...|+.+.+.+.+.- .....|+|. +| ..++++.+|+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~-l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~-----~g----~~~lr~~la~ 86 (400)
T 3asa_A 17 ADLQKRVAQFRLENPQHTVIN-LSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPD-----FG----LPALRQKLSE 86 (400)
T ss_dssp HHHHHHHHHHHHHCTTSCCEE-CSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCT-----TC----CHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcCCCceEe-ccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCC-----CC----CHHHHHHHHH
Confidence 45666777665443 22333 4556555556666654443211 111233321 12 2356788999
Q ss_pred H--hC-CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE-EEEecccc---ccc-c
Q 002263 111 L--TG-LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK-VVVSDLKD---IDY-K 182 (946)
Q Consensus 111 L--~g-~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~-v~~~~~~~---l~~-i 182 (946)
+ .| .++.++.+++|+|.+++.+...+ . +||+|+++...|+.+...++. .|.+ ++.++.++ +.. +
T Consensus 87 ~l~~g~~~~~~v~~~~G~~~al~~~~~~~--~--~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~l 158 (400)
T 3asa_A 87 DFYRGFVDAKEIFISDGAKVDLFRLLSFF--G--PNQTVAIQDPSYPAYLDIARL----TGAKEIIALPCLQENAFFPEF 158 (400)
T ss_dssp TTSTTSSCGGGEEEESCHHHHHHHHHHHH--C--SSCEEEEEESCCHHHHHHHHH----TTCSEEEEEECCGGGTTCCCC
T ss_pred HHHcCCCCHHHEEEccChHHHHHHHHHHc--C--CCCEEEECCCCcHHHHHHHHH----cCCcceEecccchhcCcccCh
Confidence 8 57 67778999999998877643222 3 789999999999998877643 4666 77776532 211 2
Q ss_pred C--CCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCcc-ccC---C-CCCCCc----cceEEEecc-cc
Q 002263 183 S--GDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-LTI---L-KPPGEL----GADIVVGSA-QR 246 (946)
Q Consensus 183 ~--~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~a-l~~---l-~~~~~~----GaDi~v~s~-k~ 246 (946)
. +++++|++++| |.+|.+.+ +++|+++|+++|+++++|. ..+ +.. . .+...+ +.+++++|. |.
T Consensus 159 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 237 (400)
T 3asa_A 159 PEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDA-AYSTFISDPSLPKSIFEIPDARFCAIEINSFSKP 237 (400)
T ss_dssp CTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC-TTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGG
T ss_pred hhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEc-hhhhhhcCCCCCCchhhCCCCCCceEEEecchhh
Confidence 2 57889999888 67999876 6788999999999999953 222 211 1 111222 245888887 87
Q ss_pred ccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccccc--ccCCCccchHHHHHHHHHHHHH
Q 002263 247 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD--KATSNICTAQALLANMAAMYAV 324 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre--~aTsni~t~~~l~a~~aa~y~~ 324 (946)
|+.| |..+|++++++++.+.+. .+.+ . + .. .++. -+|.|. ....+..+++ .
T Consensus 238 ~g~~----GlriG~~~~~~~~~~~~~-----~~~~----~-----~---~~-~~~~~~~~~~~~---~~~~a~~~~l--~ 290 (400)
T 3asa_A 238 LGFA----GIRLGWTVIPQELTYADG-----HFVI----Q-----D---WE-RFLSTTFNGASI---PAQEAGVAGL--S 290 (400)
T ss_dssp GTTT----TCCCEEEECCTTCBCTTS-----CBHH----H-----H---HH-HHHHHHCCCCCH---HHHHHHHHHH--H
T ss_pred cCCc----chheeEEeeChhhccchh-----hhHH----H-----H---HH-HHhccCccCCCh---HHHHHHHHHh--C
Confidence 7532 334799998876642220 0000 0 0 00 0000 012222 1222222221 2
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEe-cCC---HHHHHHHHHH-cCCeeeee------cCC
Q 002263 325 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK-CAD---AHAIASAAYK-IEMNLRVV------DSN 393 (946)
Q Consensus 325 ~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~-~~~---~~~v~~~L~~-~GI~~~~~------~~~ 393 (946)
. + .++++.++..++.++|.+.|+++| +++.......-+.+. .+. +.++.+.|.+ +||.+... .++
T Consensus 291 ~-~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~ 366 (400)
T 3asa_A 291 I-L--PQLEAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSG 366 (400)
T ss_dssp H-T--TTCHHHHHHHHHHHHHHHHHHHTT-CEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGCGGGTT
T ss_pred c-H--HHHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhCCCCCC
Confidence 1 1 466778888889999999999887 887642212234555 542 5578887765 59987642 246
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 394 TVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 394 ~lris~~~~~t~edid~ll~~l~~~ 418 (946)
.+|+|+ ++++++++++++.|+..
T Consensus 367 ~iRis~--~~~~e~i~~~l~~l~~~ 389 (400)
T 3asa_A 367 FVRFSS--LGKREDILAACERLQMA 389 (400)
T ss_dssp CEEEEC--CSCHHHHHHHHHHHHC-
T ss_pred EEEEEe--eCCHHHHHHHHHHHHHH
Confidence 899994 67999999999999753
No 391
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.52 E-value=1.6e-13 Score=157.06 Aligned_cols=249 Identities=12% Similarity=0.096 Sum_probs=151.9
Q ss_pred CCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCC--CCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHH
Q 002263 567 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEIC 641 (946)
Q Consensus 567 ~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~--~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~ 641 (946)
++++|+++...|+.+...++..|++++.+|++ +++.+|+++|+++++++.++++++++++| |.+|.+- +++++|+
T Consensus 130 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~ 209 (409)
T 4eu1_A 130 NCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVC 209 (409)
T ss_dssp SCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred CCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHH
Confidence 45899999998888888899999999999983 45789999999999765456777778888 5688875 2477799
Q ss_pred HHHHHcCCEEEEeccccc-ccccc----cCCC---ccCCC-EEEeCCCcccccCCCCCCCcceeE--EE-ecc----cCC
Q 002263 642 KIIHDNGGQVYMDGANMN-AQVGL----TSPG---YIGAD-VCHLNLHKTFCIPHGGGGPGMGPI--GV-KKH----LAP 705 (946)
Q Consensus 642 ~ia~~~g~ll~vD~a~~~-a~~gl----~~pg---~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i--~~-~~~----l~~ 705 (946)
++|+++|+++++|.++.. ...+. .... ..+.+ +++.+++|+|+.| |.++|++ ++ +++ +..
T Consensus 210 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~riG~~~~v~~~~~~~~~l~~ 285 (409)
T 4eu1_A 210 DVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLY----GHRCGALHISTASAEEAKRLVS 285 (409)
T ss_dssp HHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCG----GGCCEEEEEECSSHHHHHHHHH
T ss_pred HHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCc----cCCceEEEEEeCCHHHHHHHHH
Confidence 999999999999998531 11110 0000 12233 5667888988643 6678986 44 344 333
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc-----HhhHHHHHHHHHHHHHHHHHHHhcc-CC
Q 002263 706 FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG-----SKGLTEASKIAILNANYMAKRLEKH-YP 779 (946)
Q Consensus 706 ~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG-----~eGl~~~~~~~~~~a~~l~~~L~~~-~~ 779 (946)
.+.... + ....+.+ .....++..++.... .+.+++..++...+.+++.+.|++. +.
T Consensus 286 ~~~~~~-----------~---~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 347 (409)
T 4eu1_A 286 QLALLI-----------R---PMYNNPP----LYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSV 347 (409)
T ss_dssp HHHHHH-----------H---HHHSSCC----HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHH-----------h---hhcCCCC----hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 221000 0 0001111 111122222232110 2335556666778888999999874 11
Q ss_pred --eeeccCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 780 --ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 780 --v~~~~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
+.+..+++.+ +++ . +.+. ++.++|. ++||.+.. + .||++.. .+++++++++++|+++
T Consensus 348 ~~~~~~~~~~~~---~~~-~-------~~~~-~~~~~ll~~~gv~v~p------~-~Ri~~~~-~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 348 HDWSHIERQVGM---MAY-T-------GLTR-EQVELLRSEYHIYMTL------N-GRAAVSG-LNSTNVEYVSQAIHNV 407 (409)
T ss_dssp SCCHHHHHSCSS---EEE-C-------CCCH-HHHHHHHHHHCEECCT------T-CEEEGGG-CCTTTHHHHHHHHHHH
T ss_pred CCcceecCCceE---EEE-e-------CCCH-HHHHHHHHcCCEEEcC------C-CEEEEEe-cCHhhHHHHHHHHHHH
Confidence 2111112222 222 1 1233 4455555 67998741 1 4788865 4567799999999876
Q ss_pred H
Q 002263 857 R 857 (946)
Q Consensus 857 ~ 857 (946)
+
T Consensus 408 l 408 (409)
T 4eu1_A 408 T 408 (409)
T ss_dssp H
T ss_pred h
Confidence 4
No 392
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.52 E-value=7.5e-14 Score=159.47 Aligned_cols=296 Identities=15% Similarity=0.124 Sum_probs=169.2
Q ss_pred HHHHHHHHHh--hC-CCccccc-CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcCCE-EEEEcC
Q 002263 523 NNLGEWLCTI--TG-FDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK-IVSVGT 597 (946)
Q Consensus 523 ~el~~~la~l--~G-~~~~~l~-~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G~~-vv~v~~ 597 (946)
.++++.++++ .| .+...+. .++++++.. .+ ++.+ . ++++|+++...|..+...+...|.+ ++.+|.
T Consensus 78 ~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~-~~--~~~~--~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 148 (400)
T 3asa_A 78 PALRQKLSEDFYRGFVDAKEIFISDGAKVDLF-RL--LSFF--G----PNQTVAIQDPSYPAYLDIARLTGAKEIIALPC 148 (400)
T ss_dssp HHHHHHHHHTTSTTSSCGGGEEEESCHHHHHH-HH--HHHH--C----SSCEEEEEESCCHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCHHHEEEccChHHHHH-HH--HHHc--C----CCCEEEECCCCcHHHHHHHHHcCCcceEeccc
Confidence 3566778877 47 4543433 344444442 22 2222 2 4578999888776666667889998 999998
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-ccccccc--CHHHHHHHHHHcCCEEEEecccc-cccccc--cCCCccC
Q 002263 598 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANM-NAQVGL--TSPGYIG 671 (946)
Q Consensus 598 ~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~--~i~~I~~ia~~~g~ll~vD~a~~-~a~~gl--~~pg~~G 671 (946)
++++..+. ++++ + +++++|++++|+ .+|.+.+ ++++|+++|+++|+++++|+++. ....+- .....++
T Consensus 149 ~~~~~~~~-~l~~-~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 222 (400)
T 3asa_A 149 LQENAFFP-EFPE-D----THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIP 222 (400)
T ss_dssp CGGGTTCC-CCCT-T----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGST
T ss_pred chhcCccc-Chhh-c----cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCC
Confidence 75433221 1211 1 568889999984 6898862 37889999999999999999875 222121 1111222
Q ss_pred --C--CEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHH
Q 002263 672 --A--DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 747 (946)
Q Consensus 672 --a--Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~ 747 (946)
. ++++.+++|+|+. +|.++|++++++++..... ..+.. ... .... ....+ .+.....++.++
T Consensus 223 ~~~~~~i~~~s~sK~~g~----~GlriG~~~~~~~~~~~~~-~~~~~---~~~--~~~~-~~~~~---~~~~~~~a~~~~ 288 (400)
T 3asa_A 223 DARFCAIEINSFSKPLGF----AGIRLGWTVIPQELTYADG-HFVIQ---DWE--RFLS-TTFNG---ASIPAQEAGVAG 288 (400)
T ss_dssp TGGGTEEEEEECCGGGTT----TTCCCEEEECCTTCBCTTS-CBHHH---HHH--HHHH-HHCCC---CCHHHHHHHHHH
T ss_pred CCCCceEEEecchhhcCC----cchheeEEeeChhhccchh-hhHHH---HHH--HHhc-cCccC---CChHHHHHHHHH
Confidence 2 4778899999853 3677899998877632211 00000 000 0000 00100 011112222233
Q ss_pred HHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeeEEEe-cccccccCCCCHHHHHHHHHH-CCcccCC
Q 002263 748 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVD-LRGLKNTAGIEPEDVAKRLMD-YGFHGPT 824 (946)
Q Consensus 748 l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~~~~~~~~~~e~v~~-~~~~~~~~g~~~~~i~~~L~~-~Gi~~~~ 824 (946)
+.. + .+++..++...+.++|.+.|++. +.+ +.+..+.+ +.++ ++ .+.+..++.++|.+ +|+.+..
T Consensus 289 l~~-~--~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~---~~~~~~~-----~~~~~~~~~~~l~~~~gv~v~~ 356 (400)
T 3asa_A 289 LSI-L--PQLEAIHYYRENSDLLRKALLATGFEV-FGGEHAPY---LWVKPTQ-----ANISDRDLFDFFLREYHIAITP 356 (400)
T ss_dssp HHH-T--TTCHHHHHHHHHHHHHHHHHHHTTCEE-EECSSSSE---EEEECCC-----TTCCTTTHHHHHHHHHSEECEE
T ss_pred hCc-H--HHHHHHHHHHHHHHHHHHHHHHCCCee-eCCCCceE---EEEeccC-----CCCCHHHHHHHHHHhCCEEEeC
Confidence 332 1 34555566667888999999875 333 22211222 4556 43 13455678888875 5998642
Q ss_pred -CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 002263 825 -MSWP--VPGTLMIEPTESESKEELDRYCDALISIREEIA 861 (946)
Q Consensus 825 -~~~p--~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~ 861 (946)
..|. ..+++||+. ..++++++++++.|++++++..
T Consensus 357 g~~f~~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 357 GIGFGRSGSGFVRFSS--LGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp GGGGCGGGTTCEEEEC--CSCHHHHHHHHHHHHC------
T ss_pred hhHhCCCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHhhh
Confidence 2232 247899994 5689999999999988876543
No 393
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.51 E-value=3.7e-13 Score=156.35 Aligned_cols=288 Identities=12% Similarity=0.064 Sum_probs=170.6
Q ss_pred HHHHHHHHhh-CCC-----ccccc---CCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHH----HcCC
Q 002263 524 NLGEWLCTIT-GFD-----SFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA----MCGM 590 (946)
Q Consensus 524 el~~~la~l~-G~~-----~~~l~---~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~----~~G~ 590 (946)
++++.+++++ |.+ ...+. +++|+++...+ ..+.... .++++|+++...|..+...+. ..|+
T Consensus 98 ~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~-~~~~~~~-----~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~ 171 (448)
T 3meb_A 98 LFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIG-FEFLHLW-----MPKAEFYMPSTTWPNHYGIYDKVFNKLKV 171 (448)
T ss_dssp HHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHH-HHHHHHH-----CTTCCEEEESSCCTHHHHHHHHHHCTTTS
T ss_pred HHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHH-HHHHHHh-----CCCCEEEECCCCCHhHHHHHHhhHHhCCC
Confidence 4556666655 765 22333 55565555321 1222211 245789999999988888888 8999
Q ss_pred EEEEEcC-CCC--CCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc
Q 002263 591 KIVSVGT-DAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG 663 (946)
Q Consensus 591 ~vv~v~~-~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~g 663 (946)
+++.+|+ +++ +.+|+++|++++++..++++++++.+| |.+|.+. +++++|+++|+++|+++++|.++.. ..++
T Consensus 172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~ 251 (448)
T 3meb_A 172 PYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGS 251 (448)
T ss_dssp CCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSC
T ss_pred eEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCC
Confidence 9999998 665 789999999999865456888888888 5688875 2477799999999999999987531 1111
Q ss_pred cc--CC-----CccCCC-EEEeCCCcccccCCCCCCCcceeE--EE--------e-c----ccCCCCCCCccccCCCCCC
Q 002263 664 LT--SP-----GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPI--GV--------K-K----HLAPFLPSHPVVSTGGIPA 720 (946)
Q Consensus 664 l~--~p-----g~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i--~~--------~-~----~l~~~lp~~~v~~~~d~~~ 720 (946)
.. .+ ...+.+ +++.++||.|+.| |.++|++ .+ . + .+...+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~---------- 317 (448)
T 3meb_A 252 FEADAFAVRMFVDAGVEVLVAQSFSKNFGLY----GERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQ---------- 317 (448)
T ss_dssp HHHHTHHHHHHHHTTCCEEEEEECTTTSCCG----GGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHH----------
T ss_pred cccCchhHHHHhhcCCcEEEEecccccCCCc----cccceeeeeeeccccccccCCHHHHHHHHHHHHHH----------
Confidence 00 00 012445 5578899998643 6778987 55 3 3 333222100
Q ss_pred CCCCCCCCCcccCccchhhHHHHHHHHHHHHc-----HhhHHHHHHHHHHHHHHHHHHHhcc-CC-------eeeccCCC
Q 002263 721 PEKSQPLGTIAAAPWGSALILPISYTYIAMMG-----SKGLTEASKIAILNANYMAKRLEKH-YP-------ILFRGVNG 787 (946)
Q Consensus 721 ~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG-----~eGl~~~~~~~~~~a~~l~~~L~~~-~~-------v~~~~~~~ 787 (946)
....+++.+ .....++.+.+.... .+.+.+..++...++++|.+.|++. +. +.+..+++
T Consensus 318 --~~~~~~~~~------~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 389 (448)
T 3meb_A 318 --IRKTWSMSA------IHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAI 389 (448)
T ss_dssp --HHTTTSSCC------HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCC
T ss_pred --HhcccCCcc------HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCc
Confidence 000111111 111111122221100 1335566667778888999999875 11 11111112
Q ss_pred ceeeeEEEecccccccCCCCHHHHHHHH-HHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 002263 788 TVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 858 (946)
Q Consensus 788 ~~~~e~v~~~~~~~~~~g~~~~~i~~~L-~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~ 858 (946)
.+ |++. +++. ++.++| .++||.+.. +..||++.. .++++|++++++|.++++
T Consensus 390 g~---~~~~--------~~~~-~~~~~ll~~~gV~v~~------G~gRis~a~-~~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 390 GM---FTFT--------GLTP-EHVDYLKEKWSIYLVK------AGGRMSMCG-LTESNCDYVAEAIHDAVT 442 (448)
T ss_dssp SS---EEEC--------CCCH-HHHHHHHHHHCEEECS------GGGEEEGGG-CCTTTHHHHHHHHHHHHH
T ss_pred eE---EEec--------CCCH-HHHHHHHHhCCEEEeC------CCcEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 12 2221 2343 445555 577998742 224898864 356679999999998876
No 394
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.51 E-value=3.5e-13 Score=154.01 Aligned_cols=210 Identities=16% Similarity=0.103 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHH-----HHHcCCEEEEE
Q 002263 521 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSV 595 (946)
Q Consensus 521 ~~~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~-----a~~~G~~vv~v 595 (946)
...++++.++++.|.+.. +..++|+++..+ +++ . ..++++|+++...|+..... +...|++++.+
T Consensus 68 ~~~~l~~~la~l~g~~~~-~~~~sG~~Ai~~-~~~---l-----~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 137 (400)
T 3nmy_A 68 TRFAYERCVAALEGGTRA-FAFASGMAATST-VME---L-----LDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV 137 (400)
T ss_dssp HHHHHHHHHHHHHTCSEE-EEESSHHHHHHH-HHT---T-----SCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCE-EEecCHHHHHHH-HHH---H-----cCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE
Confidence 456888999999998753 556778766543 221 1 12568899988877633333 23369999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcCCEEEEecccccccccccCCCccCCCE
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 674 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg~~GaDi 674 (946)
+.+ |+++|+++++ +++++|++++|+ .+|.+. |+++|+++|+++|+++++|+++.. +.+..|..+|+|+
T Consensus 138 ~~~-----d~~~l~~~i~---~~~~~v~~e~~~np~G~~~-~l~~i~~la~~~g~~livDe~~~~--~~~~~~~~~g~di 206 (400)
T 3nmy_A 138 DLT-----DPAAFKAAIR---ADTKMVWIETPTNPMLKLV-DIAAIAVIARKHGLLTVVDNTFAS--PMLQRPLSLGADL 206 (400)
T ss_dssp CTT-----SHHHHHHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHTTCEEEEECTTTH--HHHCCGGGGTCSE
T ss_pred CCC-----CHHHHHHHhc---cCCCEEEEECCCCCCCeee-cHHHHHHHHHHcCCEEEEECCCcc--cccCChhhcCCcE
Confidence 874 8999999996 789999999994 789988 799999999999999999998642 2234677789999
Q ss_pred EEeCCCcccccCCCCCCCcce-eEEE-ecccCCCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHc
Q 002263 675 CHLNLHKTFCIPHGGGGPGMG-PIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 752 (946)
Q Consensus 675 ~~~s~hK~f~~P~g~GGPg~G-~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG 752 (946)
++.+++|+|+.| |.+-.| .+++ ++++.+.+.... ...+. +. +. ..+|..++ +
T Consensus 207 v~~S~sK~l~g~---g~~~gG~~vv~~~~~~~~~l~~~~-------------~~~g~-~~----~~---~~a~~~l~--~ 260 (400)
T 3nmy_A 207 VVHSATKYLNGH---SDMVGGIAVVGDNAELAEQMAFLQ-------------NSIGG-VQ----GP---FDSFLALR--G 260 (400)
T ss_dssp EEEETTTTTTCS---SSCCCEEEEECSCHHHHHHHHHHH-------------HHHCC-BC----CH---HHHHHHHH--H
T ss_pred EEecCccccCCC---CCcceeEEEEeCCHHHHHHHHHHH-------------HhcCC-CC----CH---HHHHHHHH--h
Confidence 999999998522 112234 3444 344443321000 00000 11 11 12333333 3
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhcc
Q 002263 753 SKGLTEASKIAILNANYMAKRLEKH 777 (946)
Q Consensus 753 ~eGl~~~~~~~~~~a~~l~~~L~~~ 777 (946)
-+.+..+.++..+++.++.+.|++.
T Consensus 261 l~~l~~r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 261 LKTLPLRMRAHCENALALAQWLETH 285 (400)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3456666677788999999999875
No 395
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.50 E-value=2.1e-13 Score=154.71 Aligned_cols=278 Identities=14% Similarity=0.109 Sum_probs=177.8
Q ss_pred HHHHHHHH-HHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 101 LLNFQTMI-ADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 101 l~e~q~~l-a~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
..++++.+ |+++| ...++.++.+||.+...++.++... +||+||++...|+++...++ ..|++++.+|++
T Consensus 38 ~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~--~Gd~Vi~~~~~~~~~~~~~~----~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 38 NQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRK--KGKYALMPSFTFPATPLAAI----WCGLEPYFIDISID 110 (377)
T ss_dssp HHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCT--TCCEEEEESSSCTHHHHHHH----HTTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCCcHHHHHHHH----HcCCEEEEEecCCc
Confidence 35677899 99999 2345788999998887777665333 89999999999999988764 358888887753
Q ss_pred -------cccc-c-CCC--EeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCCCc---cceEEEec
Q 002263 178 -------DIDY-K-SGD--VCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGEL---GADIVVGS 243 (946)
Q Consensus 178 -------~l~~-i-~~~--t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~~~---GaDi~v~s 243 (946)
++++ + +++ |++|++++ .+|.+.|+++|.++|+ +|+++++++ .++++.......+ .+|+.+.|
T Consensus 111 ~~~~d~~~l~~~i~~~~~~tk~v~~~~--~~G~~~~~~~i~~la~-~~~~vi~D~-a~a~g~~~~~~~~g~~~~d~~~~S 186 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEELKEEVAIVVPYA--TFGSWMNLEEYEELEK-KGVPVVVDA-APGFGLMNGGMHYGQDFSGMIIYS 186 (377)
T ss_dssp TCSBCHHHHHHHHHHHGGGEEEECCBC--GGGBCCCCHHHHHHHH-TTCCBEEEC-TTCTTCEETTEETTTTCSSEEEEE
T ss_pred cCCcCHHHHHHHHhcCCCCceEEEEEC--CCCCccCHHHHHHHHh-cCCEEEEEC-CCccCCeECCEeccCCCCcEEEEE
Confidence 3444 5 556 99888544 5899999999999999 999999953 3455543222223 36787776
Q ss_pred --c-ccccccCCCCCCceEEEEEch-hhhhcCCC-ceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHH
Q 002263 244 --A-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 318 (946)
Q Consensus 244 --~-k~lg~P~~~GGP~~g~l~~~~-~~~~~lp~-~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~ 318 (946)
. |.|+. +..|++.+++ ++.+++.. +-.|.. .. +. + .+.|. |... ..+ .
T Consensus 187 ~~~~K~l~~------g~gG~~~~~~~~l~~~~~~~~~~g~~----~~--~~--------~--~~~g~-~~~~-~~~---~ 239 (377)
T 3ju7_A 187 FHATKPFGI------GEGGLIYSKNEEDIQRIKRMGNFGFD----TN--RE--------C--TMMGF-NCKM-SEY---A 239 (377)
T ss_dssp CBTTSSSCC------BSCEEEEESCHHHHHHHHHHTBTTBC----TT--SC--------B--CSSCC-BCCC-CHH---H
T ss_pred CCCCCcCCC------CCcEEEEECCHHHHHHHHHHHhcCCC----CC--Cc--------e--eeccc-cCCC-CHH---H
Confidence 3 66642 2346777654 44433311 001100 00 00 0 01110 1111 122 1
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEE--cC-C--CCc-CeEEEecCC---HHHHHHHHHHcCCeeee
Q 002263 319 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV--QG-L--PFF-DTVKVKCAD---AHAIASAAYKIEMNLRV 389 (946)
Q Consensus 319 aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~--~~-~--~~~-~~~~i~~~~---~~~v~~~L~~~GI~~~~ 389 (946)
+++ .....+.+++..++..++++++.+.|++++++.+ .. . ... .-+.+..++ ..++.+.|.++||.++.
T Consensus 240 aa~--~~~~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~ 317 (377)
T 3ju7_A 240 AAI--GIATMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARL 317 (377)
T ss_dssp HHH--HHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTTBCCBC
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCCCceec
Confidence 221 1111256777888888999999999998853322 11 1 111 123555554 78999999999997632
Q ss_pred ec-------------------------CCeEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 390 VD-------------------------SNTVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 390 ~~-------------------------~~~lris~~~~~t~edid~ll~~l~~~ 418 (946)
.. ...|+++++...|++|+++++++|..-
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~ 371 (377)
T 3ju7_A 318 YFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQK 371 (377)
T ss_dssp TTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-
T ss_pred ccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 10 246999999999999999999999753
No 396
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.50 E-value=2.5e-13 Score=154.75 Aligned_cols=275 Identities=14% Similarity=0.126 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcccc----CCCCEEEEcC-CCCHHHHHHHHHhhcCC----C--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQK----GKKKTFIIAS-NCHPQTIDICITRADGF----D-- 168 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~----~~gd~vvv~~-~~Hps~~~~~~~~a~~~----g-- 168 (946)
...++++.+++++|. .++.++++||.++++++.+++... ..+++||+.+ ..|..+...++.. ... +
T Consensus 83 ~~~~l~~~la~~~g~--~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~-g~~~~~~~~~ 159 (397)
T 2ord_A 83 PQMELAELLSKNTFG--GKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTAT-GQPKYQKPFE 159 (397)
T ss_dssp HHHHHHHHHHHTTTS--CEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHS-BCHHHHGGGC
T ss_pred HHHHHHHHHHHhcCC--CeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhcc-CChhhccccC
Confidence 445677899999985 458889999988887765543100 1346777665 5556555444321 110 0
Q ss_pred ---eEEEEec---cccccc-cCCCEeEEEEEcC-CCceee----cchHHHHHHHHhCCcEEEEEecCcc-ccCCCCC---
Q 002263 169 ---IKVVVSD---LKDIDY-KSGDVCGVLVQYP-GTEGEV----LDYGDFIKNAHANGVKVVMATDLLA-LTILKPP--- 232 (946)
Q Consensus 169 ---i~v~~~~---~~~l~~-i~~~t~~v~v~~p-n~~G~i----~di~~i~~~a~~~gal~~v~a~~~a-l~~l~~~--- 232 (946)
..+..++ +++|++ +++++++|++++| |.+|.+ .++++|.++|+++|+++++|. ..+ ++....+
T Consensus 160 p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De-~~~~~~~~g~~~~~ 238 (397)
T 2ord_A 160 PLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDE-VQCGMGRTGKLFAY 238 (397)
T ss_dssp SCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEEC-TTTTTTTTSSSSHH
T ss_pred CCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEe-cccCCccCccchhh
Confidence 0144444 456666 7788999999888 678983 689999999999999999953 332 3211111
Q ss_pred CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccc
Q 002263 233 GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 310 (946)
Q Consensus 233 ~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t 310 (946)
..+| .|+++. +|+|+. |-..|++++++++. .+.. +. ...|.+. +
T Consensus 239 ~~~~~~~d~~s~-sK~~~~-----G~r~G~~~~~~~~~-~l~~----------~~----------------~~~~~~~-~ 284 (397)
T 2ord_A 239 QKYGVVPDVLTT-AKGLGG-----GVPIGAVIVNERAN-VLEP----------GD----------------HGTTFGG-N 284 (397)
T ss_dssp HHHTCCCSEEEE-CGGGGT-----TSCCEEEEECSTTC-CCCT----------TS----------------SCCSSTT-C
T ss_pred hhhCCCCCeeee-ccccCC-----CcCeEEEEEchHhc-ccCC----------CC----------------cCCCCCC-C
Confidence 1234 787754 488852 33478888887765 4411 00 0011111 1
Q ss_pred hHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CEEEcC--CCCcCeEEEecCC---HHHHHHHHHHcC
Q 002263 311 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQG--LPFFDTVKVKCAD---AHAIASAAYKIE 384 (946)
Q Consensus 311 ~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g-~~~~~~--~~~~~~~~i~~~~---~~~v~~~L~~~G 384 (946)
.....+..+++ ..+.. +++.++..++.+++++.|++++ ++.++. .+...-+.+.+++ ..++.+.|.++|
T Consensus 285 ~~~~~a~~~~l--~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~g 359 (397)
T 2ord_A 285 PLACRAGVTVI--KELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEVSNREVATKCFENK 359 (397)
T ss_dssp HHHHHHHHHHH--HHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH--HHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChHHHHHHHHHHHHCC
Confidence 11222222332 33333 3466777788888888887652 122110 1111223444432 788999999999
Q ss_pred CeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 385 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 385 I~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
|.++...++.+|++++..++++|+++++++|..
T Consensus 360 i~v~~~~~~~iRis~~~~~~~e~i~~~~~~l~~ 392 (397)
T 2ord_A 360 LLVVPAGNNTIRFLPPLTVEYGEIDLAVETLKK 392 (397)
T ss_dssp EECEEETTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CEEccCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 998876578899999999999999999999863
No 397
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.50 E-value=5.4e-13 Score=165.05 Aligned_cols=339 Identities=13% Similarity=0.078 Sum_probs=200.9
Q ss_pred cceee-ecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhhCC---CcccccCCchHHHHHHHHHHH
Q 002263 481 PLGSC-TMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF---DSFSLQPNAGAAGEYAGLMVI 556 (946)
Q Consensus 481 ~lGs~-~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~G~---~~~~l~~~sGa~ge~a~l~a~ 556 (946)
.+|+| .+.+..++..+... +.+.+ +. ..+.+...++.+.|+++++. +. .++.++|++++++++.++
T Consensus 393 ~lGh~~~p~i~~Ai~~Q~~~---l~h~~-~~-----~~~~~~~~~Lae~L~~~~p~~~l~~-vff~~SGSeA~E~AlK~A 462 (831)
T 4a0g_A 393 GPDPTFQAELAREMGYTAAR---FGHVM-FP-----ENVYEPALKCAELLLDGVGKGWASR-VYFSDNGSTAIEIALKMA 462 (831)
T ss_dssp CCCHHHHHHHHHHHHHHHHH---HSSCC-CT-----TEECHHHHHHHHHHHHTTTTTTCCE-EEEESSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhh---ccccc-cc-----ccCCHHHHHHHHHHHHhCCCCCCCE-EEECCChhHHHHHHHHHH
Confidence 57888 87777777766322 21111 10 01123344888999999973 33 367789999999888877
Q ss_pred -HHHHHhcCCC--------CCCEEE-EcCCCCCCCHHHHHHcCCE----------------------------EEEEcCC
Q 002263 557 -RAYHKARGDH--------HRNVCI-IPVSAHGTNPATAAMCGMK----------------------------IVSVGTD 598 (946)
Q Consensus 557 -r~y~~~~G~~--------~~~~Il-i~~saHg~~~~~a~~~G~~----------------------------vv~v~~~ 598 (946)
|.|+..+|.. +|.+|| ...++||....++...|.+ +..+++.
T Consensus 463 ~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p 542 (831)
T 4a0g_A 463 FRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLP 542 (831)
T ss_dssp HHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECC
T ss_pred HHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCC
Confidence 6777666642 355666 5788999998887665421 0122221
Q ss_pred CC------C---CCC------------------HHHHHHHHHh-----cCCCeEEEEEeCC--Cccccccc---CHHHHH
Q 002263 599 AK------G---NIN------------------IEELRKAAEA-----NRDNLSTLMVTYP--STHGVYEE---GIDEIC 641 (946)
Q Consensus 599 ~~------g---~~D------------------~e~L~~~i~~-----~~~~t~~vvvt~P--n~~G~~~~---~i~~I~ 641 (946)
.. + .-| .++|++.|++ +.+++++|++..- +..|++.+ .+++|.
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~ 622 (831)
T 4a0g_A 543 ESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLV 622 (831)
T ss_dssp TTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHH
T ss_pred ccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHH
Confidence 10 0 012 3677777753 2356777777642 34566652 389999
Q ss_pred HHHHHcCCEEEEecccccccccccCCCcc------C--CCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccc
Q 002263 642 KIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 713 (946)
Q Consensus 642 ~ia~~~g~ll~vD~a~~~a~~gl~~pg~~------G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~ 713 (946)
++|++||+++|+|.+ +.|+.+.|.+ | +|++++ .|.++ +|.-.+|++++++++.+.+....
T Consensus 623 ~lc~~~gilLI~DEV----~tGfGRtG~~fa~e~~gv~PDiitl--sK~L~----gG~~Plgav~~~~~i~~~~~~~~-- 690 (831)
T 4a0g_A 623 NECRNRKIPVIFDEV----FTGFWRLGVETTTELLGCKPDIACF--AKLLT----GGMVPLAVTLATDAVFDSFSGDS-- 690 (831)
T ss_dssp HHHHHTTCCEEEECT----TTTTTTTSBSSTHHHHSSCCSEEEE--CGGGG----TTSSCCEEEEECHHHHHTTCSSC--
T ss_pred HHHHHcCCeEEEEcC----ccccccCCCchhhHhcCCCCcEEEE--ecccc----cCccCcEEEEECHHHHHHHhccc--
Confidence 999999999999986 4566665543 2 599876 48773 33367899999988776653210
Q ss_pred cCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHH-HH----HHHHHHHHhccCCe-eeccCCC
Q 002263 714 STGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI-LN----ANYMAKRLEKHYPI-LFRGVNG 787 (946)
Q Consensus 714 ~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~-~~----a~~l~~~L~~~~~v-~~~~~~~ 787 (946)
+........| +.|+.+.++++.+.|..+-++++.+..+... .. .+.+.+.+++...+ ...+ .|
T Consensus 691 ---------~~~~~~hg~T-~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg-~G 759 (831)
T 4a0g_A 691 ---------KLKALLHGHS-YSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVV-IG 759 (831)
T ss_dssp ---------GGGSCCCCCT-TTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE-ET
T ss_pred ---------ccccceeecC-CcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEee-cc
Confidence 0000011111 3346777777888888876655443221100 00 11233344433111 1112 12
Q ss_pred ceeeeEEEeccccccc---CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 788 TVAHEFIVDLRGLKNT---AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 788 ~~~~e~v~~~~~~~~~---~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
.+ +.+++..-... ....+.++.++|.++|+.+. |.++.||++|+..+|++|||+++++|.+++++
T Consensus 760 l~---~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~----p~g~~lrl~pp~~~t~e~id~~~~~l~~~l~~ 827 (831)
T 4a0g_A 760 TL---FALELKADASNSGYASLYAKSLLIMLREDGIFTR----PLGNVIYLMCGPCTSPEICRRLLTKLYKRLGE 827 (831)
T ss_dssp TE---EEEEEC---------CHHHHHHHHHHHHTTEECC----CBTTEEEEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred cE---EEEEEecCccccccchHHHHHHHHHHHHCCcEEE----ecCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 22 22332210000 01135679999999999986 33589999999999999999999999988654
No 398
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.49 E-value=9.5e-12 Score=141.58 Aligned_cols=275 Identities=13% Similarity=0.123 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc---c-CCCCEEEEcCCCC-HHHHHHHH--------HhhcC
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ---K-GKKKTFIIASNCH-PQTIDICI--------TRADG 166 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~---~-~~gd~vvv~~~~H-ps~~~~~~--------~~a~~ 166 (946)
...++++.+++++|. .++.++++||.++++++.+.+.. + .++++||+.+..| ......+. .....
T Consensus 79 ~~~~l~~~la~~~~~--~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 3nx3_A 79 NIAAAAKNLAKASAL--ERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKP 156 (395)
T ss_dssp HHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCS
T ss_pred HHHHHHHHHHHhcCC--CeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCC
Confidence 445677899999984 46889999998888776543211 0 1578888777554 43332221 11123
Q ss_pred CCeEEEEec---cccccc-cCCCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCcc-ccCCCCC---C
Q 002263 167 FDIKVVVSD---LKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKPP---G 233 (946)
Q Consensus 167 ~gi~v~~~~---~~~l~~-i~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~a-l~~l~~~---~ 233 (946)
.+.++..++ +++|++ +++++++|++..+ |..|.+.+ +++|.++|+++|+++++|. ..+ ++..... .
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De-v~~~~g~~g~~~~~~ 235 (395)
T 3nx3_A 157 LISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADE-IQCGMGRSGKFFAYE 235 (395)
T ss_dssp CCSCEEEECTTCHHHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEEC-TTTTTTTTSSSSGGG
T ss_pred CCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEe-cccCCCcCCcchhHH
Confidence 445666664 456776 7788999988764 67888877 9999999999999999953 222 3322111 1
Q ss_pred C--ccceEEEeccccccccCCCCCCceEEEEEchhh-hhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccc
Q 002263 234 E--LGADIVVGSAQRFGVPMGYGGPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 310 (946)
Q Consensus 234 ~--~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~-~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t 310 (946)
. ...|+++. +|.|+. |..+|++.+++++ .+.+..... ..|.+. +
T Consensus 236 ~~~~~~d~~t~-sK~~~~-----G~~~G~~~~~~~~~~~~~~~~~~--------------------------~~~~~~-~ 282 (395)
T 3nx3_A 236 HAQILPDIMTS-AKALGC-----GLSVGAFVINQKVASNSLEAGDH--------------------------GSTYGG-N 282 (395)
T ss_dssp GGTCCCSEEEE-CGGGTT-----TSCCEEEEECHHHHHHHSCTTCC--------------------------SSCBSC-C
T ss_pred hcCCCCCEEEe-cccccC-----CCceEEEEEchhhhhhhcCCccc--------------------------CCCCCC-C
Confidence 2 23576654 388852 3467899999988 766632110 011111 1
Q ss_pred hHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCEEEc-CCCCcCeEEEecC---CHHHHHHHHHH
Q 002263 311 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK----LGTVEVQ-GLPFFDTVKVKCA---DAHAIASAAYK 382 (946)
Q Consensus 311 ~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~----~g~~~~~-~~~~~~~~~i~~~---~~~~v~~~L~~ 382 (946)
+.+..+..+++ ..+.. +++.++..++.+++++.|++ ++.+... +...+ +.+.++ .+.++.+.|.+
T Consensus 283 ~~~~~aa~aal--~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~l~~ 355 (395)
T 3nx3_A 283 PLVCAGVNAVF--EIFKE---EKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFM--QGLSLDKSVKVAKVIQKCQE 355 (395)
T ss_dssp HHHHHHHHHHH--HHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTE--EEEEECTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHHHh---hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEE--EEEEeCCcchHHHHHHHHHH
Confidence 11222222222 22212 23445555666666666654 3213222 11112 333333 27889999999
Q ss_pred cCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 383 IEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 383 ~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+||.++...++.+|++++..+|++|+++++++|..
T Consensus 356 ~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 390 (395)
T 3nx3_A 356 NALLLISCGENDLRFLPPLILQKEHIDEMSEKLRK 390 (395)
T ss_dssp TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 99999876678999999999999999999999863
No 399
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.49 E-value=7e-13 Score=153.92 Aligned_cols=276 Identities=14% Similarity=0.123 Sum_probs=171.8
Q ss_pred HHHHHH-HHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHH-HHHH-HhhcCCCeEEEEe--
Q 002263 100 SLLNFQ-TMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTI-DICI-TRADGFDIKVVVS-- 174 (946)
Q Consensus 100 ~l~e~q-~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~-~~~~-~~a~~~gi~v~~~-- 174 (946)
.+.++. +.+++++|++..++ ++.+||.+.++++.++. . +||+|+++...|++.. .... ... +.++.++.+
T Consensus 91 ~~e~~a~~~la~~~g~~~~~v-~~~sGs~a~~~a~~~~~-~--~Gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~ 165 (447)
T 3h7f_A 91 VVENLARDRAKALFGAEFANV-QPHSGAQANAAVLHALM-S--PGERLLGLDLANGGHLTHGMRLNFS-GKLYENGFYGV 165 (447)
T ss_dssp HHHHHHHHHHHHHHTCSEEEC-CCSSHHHHHHHHHHHHC-C--TTCEEEEECGGGTCCGGGTCTTSHH-HHSSEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCceEE-EeCCHHHHHHHHHHHhc-C--CCCEEEecCcccccccchhhhhhhc-CCeeEEEEcCc
Confidence 334444 89999999986333 36788877777666552 2 8999999998887621 1100 001 123344433
Q ss_pred -------ccccccc-cC-CCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEEe-cCccc---cCCCCCCCccceEEE
Q 002263 175 -------DLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMAT-DLLAL---TILKPPGELGADIVV 241 (946)
Q Consensus 175 -------~~~~l~~-i~-~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~a-~~~al---~~l~~~~~~GaDi~v 241 (946)
|++++++ +. .++++|++.+|++ +...|+++|.++|+++|+++++|. +...+ +....+. .++|+++
T Consensus 166 ~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~-~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~ 243 (447)
T 3h7f_A 166 DPATHLIDMDAVRATALEFRPKVIIAGWSAY-PRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVS 243 (447)
T ss_dssp CTTTCSCCHHHHHHHHHHHCCSEEEEECSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEE
T ss_pred CcccCCcCHHHHHHHHHhcCCeEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEE
Confidence 3345655 42 3577888777744 333499999999999999999943 22221 1112222 3689999
Q ss_pred ecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHH
Q 002263 242 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 320 (946)
Q Consensus 242 ~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa 320 (946)
.|. |+|+ ||-.|++++++++.+.+.... .+ ...++++. ....+..++
T Consensus 244 ~s~sK~l~------G~~gG~i~~~~~~~~~l~~~~---------~~--------------~~~~~~~~---~~~~a~~~a 291 (447)
T 3h7f_A 244 TTVHKTLG------GGRSGLIVGKQQYAKAINSAV---------FP--------------GQQGGPLM---HVIAGKAVA 291 (447)
T ss_dssp EESSGGGC------CCSCEEEEECGGGHHHHHHHH---------TT--------------TTCSSCCH---HHHHHHHHH
T ss_pred ecCCcCCC------CCCeEEEEECHHHHHHHhhhc---------CC--------------cccCCccH---HHHHHHHHH
Confidence 987 7764 455689998887765541100 00 00122222 223333333
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-----CCEEEcCC-CCcCeEEEecC--C--HHHHHHHHHHcCCeee--
Q 002263 321 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-----GTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLR-- 388 (946)
Q Consensus 321 ~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-----g~~~~~~~-~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~-- 388 (946)
+ .....+++++..+++.++++++.+.|++. | ++++.. .....+.+.+. + ...+.+.|.++||.++
T Consensus 292 ~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~ 368 (447)
T 3h7f_A 292 L--KIAATPEFADRQRRTLSGARIIADRLMAPDVAKAG-VSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRN 368 (447)
T ss_dssp H--HHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTT-CEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-
T ss_pred H--HHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCC-eEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecc
Confidence 3 33445578889999999999999999988 7 888642 22223444443 2 5677778888899876
Q ss_pred --ee------cCCeEEEEeccC----CCHHHHHHHHHHHhC
Q 002263 389 --VV------DSNTVTASFDET----TTLEDVDKLFIVFAG 417 (946)
Q Consensus 389 --~~------~~~~lris~~~~----~t~edid~ll~~l~~ 417 (946)
.. .++.+|+++... .+++|++++++.|..
T Consensus 369 ~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~ 409 (447)
T 3h7f_A 369 AVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT 409 (447)
T ss_dssp ------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence 22 246799998765 578999999998863
No 400
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.23 E-value=2.2e-15 Score=174.82 Aligned_cols=321 Identities=15% Similarity=0.119 Sum_probs=191.1
Q ss_pred cceeeecCCCcccccccccCccccccCCCCcccccccHHHHHHHHHHHHHHhh-CCCcccccCCchHHHHHHHHHHHHHH
Q 002263 481 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT-GFDSFSLQPNAGAAGEYAGLMVIRAY 559 (946)
Q Consensus 481 ~lGs~~~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~~la~l~-G~~~~~l~~~sGa~ge~a~l~a~r~y 559 (946)
.+|++.+++..++..+. ... .....| .+...++.+.|++++ +.+. .++.++|+.++++++.++|.|
T Consensus 113 ~lGh~~p~V~~Av~~q~-~~~-~~~~~~----------~~~~~~Lae~L~~~~p~~~~-v~~~nSGseA~~~Aik~ar~~ 179 (465)
T 2yky_A 113 LFGHSHPVIRAAVERAL-AVG-LNLSTQ----------TENEALFAEAVCDRFPSIDL-VRFTNSGTEANLMALATATAI 179 (465)
Confidence 57888777766666552 211 111111 123457888999998 5544 366788888887776666544
Q ss_pred HHhcCCCCCCEEEE-cCCCCCCCHHHH---HHcCC--EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccc
Q 002263 560 HKARGDHHRNVCII-PVSAHGTNPATA---AMCGM--KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGV 632 (946)
Q Consensus 560 ~~~~G~~~~~~Ili-~~saHg~~~~~a---~~~G~--~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~ 632 (946)
++|++||+ ..++||...... ...|+ .++.+|. .|+++|+++++++++++++|+++.. +.+|+
T Consensus 180 ------tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~ 248 (465)
T 2yky_A 180 ------TGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGC 248 (465)
Confidence 24566775 466788665444 12344 3344443 4899999999755568888887653 45786
Q ss_pred ccc---CHHHHHHHHHHcCCEEEEecccccccccccCCC---cc--CCCEEEeCCCcccccCCCCCCCcceeEEEecccC
Q 002263 633 YEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 704 (946)
Q Consensus 633 ~~~---~i~~I~~ia~~~g~ll~vD~a~~~a~~gl~~pg---~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~ 704 (946)
+.+ .+++|.++|+++|+++++|+++. . .....+ .+ .+|++++ .|+++ ||.++|+++++++++
T Consensus 249 ~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~--r~g~~~a~~~~gv~pDi~t~--sK~lg-----~G~piG~v~~~~~i~ 318 (465)
T 2yky_A 249 VPAERAFLDLLRAEASRCGALLIFDEVMT-S--RLSGGGAQEMLGISADLTTL--GKYIG-----GGMSFGAFGGRRDLM 318 (465)
Confidence 642 39999999999999999999864 1 111111 12 2677654 58874 356789999998887
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc---CCee
Q 002263 705 PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL 781 (946)
Q Consensus 705 ~~lp~~~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~---~~v~ 781 (946)
+.+.....+. ....+.++ ++...++++.+.|..+.++++. ++...+.++++++|++. +.+.
T Consensus 319 ~~l~~~~~g~---------~~~~~T~~----~npla~aAa~aaL~~l~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~ 382 (465)
T 2yky_A 319 ERFDPARDGA---------FAHAGTFN----NNILTMSAGHAALTQIYTRQAA---SDLSASGDRFRANLNRIAVENQAP 382 (465)
Confidence 7653210000 00001112 2344445566667766555443 34446677888888764 2221
Q ss_pred --eccCCCceeeeEEEeccc--c---c---ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHH
Q 002263 782 --FRGVNGTVAHEFIVDLRG--L---K---NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCD 851 (946)
Q Consensus 782 --~~~~~~~~~~e~v~~~~~--~---~---~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~ 851 (946)
.++ .+.+ +.+.+.. . . ........++.++|.++|+.+....++ . ++..+|++|||++++
T Consensus 383 ~~v~g-~G~~---~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~---~----~s~~~t~edid~~l~ 451 (465)
T 2yky_A 383 LQFTG-LGSL---GTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGMY---A----LSLEIADAGRDAFAE 451 (465)
Confidence 112 1222 2222221 0 0 000112457889999999987543332 1 455688999999999
Q ss_pred HHHHHHHHHHH
Q 002263 852 ALISIREEIAQ 862 (946)
Q Consensus 852 aL~~i~~e~~~ 862 (946)
+|++++++++.
T Consensus 452 ~l~~~l~~~~~ 462 (465)
T 2yky_A 452 ALADFIGEQRA 462 (465)
Confidence 99999887654
No 401
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.48 E-value=1.5e-12 Score=147.46 Aligned_cols=301 Identities=14% Similarity=0.092 Sum_probs=175.2
Q ss_pred eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHHH
Q 002263 57 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMC 135 (946)
Q Consensus 57 ~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~la 135 (946)
+|.+.+ .+..+|+.+.+.+. .| . .+. .++ .++++.+++++|.+ +.++.++.+||.+++.++.+
T Consensus 32 ~~~~~~-~~~~~~~~v~~a~~---~~----~--~~~----~~~--~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~ 95 (374)
T 2aeu_A 32 DLSGLS-GGFLIDEKDKALLN---TY----I--GSS----YFA--EKVNEYGLKHLGGDENDKCVGFNRTSSAILATILA 95 (374)
T ss_dssp ECSSCC-CCCCCCHHHHHHHT---ST----T--HHH----HHH--HHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHH
T ss_pred eecccC-CCCCCCHHHHHHHH---Hh----c--Cch----HHH--HHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHh
Confidence 655544 24467887776654 22 1 111 111 34556678899983 35678889999877776655
Q ss_pred hccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe-ccccccccCCCEeE-EEEEcC-CCce-eecchHHHHHHHH
Q 002263 136 NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS-DLKDIDYKSGDVCG-VLVQYP-GTEG-EVLDYGDFIKNAH 211 (946)
Q Consensus 136 ~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~-~~~~l~~i~~~t~~-v~v~~p-n~~G-~i~di~~i~~~a~ 211 (946)
+ +||+|+++...|+.....+. .++..|++++.+ |++++++.++++++ |++.+| |.+| .+.|+++|.++||
T Consensus 96 ~-----~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~ 169 (374)
T 2aeu_A 96 L-----KPKKVIHYLPELPGHPSIER-SCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTAK 169 (374)
T ss_dssp H-----CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEESCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHHH
T ss_pred C-----CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEeCCHHHHHhcCCCccEEEEEccCCCCCCCCcccHHHHHHHHH
Confidence 4 68999999986655443332 233468777776 44555434457899 888888 5688 8899999999999
Q ss_pred hCCcEEEEEecCccccC---C-CC-CCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCC
Q 002263 212 ANGVKVVMATDLLALTI---L-KP-PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGK 285 (946)
Q Consensus 212 ~~gal~~v~a~~~al~~---l-~~-~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~ 285 (946)
++|+++++|. ..+... . .. +.++|+|++++|. |.+ +||.+|++++++++++++..
T Consensus 170 ~~~~~li~De-~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l------~g~~~G~~~~~~~~~~~l~~------------ 230 (374)
T 2aeu_A 170 NKEAIVFVDD-ASGARVRLLFNQPPALKLGADLVVTSTDKLM------EGPRGGLLAGKKELVDKIYI------------ 230 (374)
T ss_dssp HHTCCEEEEC-TTHHHHHHHTTCCCHHHHTCSEEEEETTSSS------SSCSCEEEEEEHHHHHHHHH------------
T ss_pred HcCCEEEEEC-CcccccccccccCCccccCCcEEEecCcccc------cCcceEEEEECHHHHHHHHH------------
Confidence 9999999954 333221 1 11 3457899999998 654 34678999999888765510
Q ss_pred cceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHH----HHHHHHHHhcC----CCEEE
Q 002263 286 PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGL----AGTFALGLKKL----GTVEV 357 (946)
Q Consensus 286 ~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~----a~~l~~~L~~~----g~~~~ 357 (946)
+ +...++ +. +.....+..+++ ..+..+-++++.++...+ .+.|.+.|..+ | +.+
T Consensus 231 --~-----------~~~~~~-~~-~~~~~~a~~~al--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~ 292 (374)
T 2aeu_A 231 --E-----------GTKFGL-EA-QPPLLAGIYRAL--KNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNIN-IVY 292 (374)
T ss_dssp --H-----------HHTTTC-BC-CHHHHHHHHHHH--HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEE-EEE
T ss_pred --h-----------hccccC-CC-CHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-cce
Confidence 0 000011 00 111222233332 333222334444433333 35556666553 4 555
Q ss_pred cCCCCcCeEEE--ecCCHH------HHHH-HHHHcCCeeeee-----cCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 002263 358 QGLPFFDTVKV--KCADAH------AIAS-AAYKIEMNLRVV-----DSNTVTASFDE-TTTLEDVDKLFIVFAG 417 (946)
Q Consensus 358 ~~~~~~~~~~i--~~~~~~------~v~~-~L~~~GI~~~~~-----~~~~lris~~~-~~t~edid~ll~~l~~ 417 (946)
...+. ..+.+ ...... ++.. .|.++||.+... .++.+|++++. ..++.++++++++|..
T Consensus 293 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~ 366 (374)
T 2aeu_A 293 ERTPT-GFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVE 366 (374)
T ss_dssp EECSS-EEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHH
T ss_pred eeCCc-eEEEEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHH
Confidence 32221 12222 222221 2554 445679987542 13579999874 3344458899988863
No 402
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.48 E-value=5.6e-12 Score=145.07 Aligned_cols=284 Identities=14% Similarity=0.159 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHhhC-CCcccccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCCCHHHHHH----------
Q 002263 520 EMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAM---------- 587 (946)
Q Consensus 520 ~~~~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili-~~saHg~~~~~a~~---------- 587 (946)
+...+++++++++++ .+. .+..++|+++.++++.++|.+. ++++||+ ..+.||....+...
T Consensus 92 ~~~~~l~~~l~~~~~~~~~-v~~~~~g~ea~~~al~~ar~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 164 (424)
T 2e7u_A 92 PLEVALAKKVKRAYPFVDL-VRFVNSGTEATMSALRLARGYT------GRPYIVKFRGNYHGHADGLLVEAGSGALTLGV 164 (424)
T ss_dssp HHHHHHHHHHHHHCTTCCE-EEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCCCGGGSEECCSSSCCBCE
T ss_pred HHHHHHHHHHHHhCCCCCE-EEEeCCHHHHHHHHHHHHHHhh------CCCEEEEECCCcCCCcHHHHHhcCCcccccCC
Confidence 345678889999984 333 3566788888776666655542 2355665 45677755443221
Q ss_pred ---cCC------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccC----HHHHHHHHHHcCCEEEE
Q 002263 588 ---CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYM 653 (946)
Q Consensus 588 ---~G~------~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~----i~~I~~ia~~~g~ll~v 653 (946)
.|+ +++.+|. .|+++|+++++++.+++++|+++..+ .+|.+. + +++|.++ ++||+++++
T Consensus 165 p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~-~~~~~l~~l~~l-~~~g~~lI~ 237 (424)
T 2e7u_A 165 PSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLV-PTEDFLKALHEA-KAYGVLLIA 237 (424)
T ss_dssp ESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBC-CCHHHHHHHHHG-GGGTCEEEE
T ss_pred CCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcC-CCHHHHHHHHHH-HHcCCEEEE
Confidence 232 3555654 48999999997543467766664323 368765 4 9999999 999999999
Q ss_pred ecccccccccccCCC------c--cCCCEEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCCccccCCCCCCCCCCC
Q 002263 654 DGANMNAQVGLTSPG------Y--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 725 (946)
Q Consensus 654 D~a~~~a~~gl~~pg------~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~~v~~~~d~~~~~~~~ 725 (946)
|+++. ++ +.+ . ..+|++++ +|+|+ +|.++|++++++++.+.+.... ...
T Consensus 238 DEv~~----g~-~~g~~~~~~~~~~~~di~s~--sK~l~-----~G~~~G~~~~~~~~~~~~~~~~-----------~~~ 294 (424)
T 2e7u_A 238 DEVMT----GF-RLAFGGATELLGLKPDLVTL--GKILG-----GGLPAAAYAGRREIMEKVAPLG-----------PVY 294 (424)
T ss_dssp ECTTT----TT-TSSTTHHHHHHTCCCSEEEE--CGGGG-----TTSSCEEEEECHHHHTTBTTTS-----------SBC
T ss_pred ecCcc----cc-ccchhHHHHHhCCCcchhhh--hhhhh-----CCcceEEEEEcHHHHhhhcccC-----------Ccc
Confidence 99864 33 221 1 23688755 69985 3567899999988776553200 000
Q ss_pred CCCCcccCccchhhHHHHHHHHHHHHcH-hhHHHHHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeeEEEeccc
Q 002263 726 PLGTIAAAPWGSALILPISYTYIAMMGS-KGLTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRG 799 (946)
Q Consensus 726 ~~~~i~~~~~g~~~~~~~a~a~l~~lG~-eGl~~~~~~~~~~a~~l~~~L~~~---~~v--~~~~~~~~~~~e~v~~~~~ 799 (946)
..++.+ ++...++++.+.+..+.. +. ..++...+.+++.++|++. +.+ ..++ .+.+ +.+++..
T Consensus 295 ~~~t~~----~~~~~~aaa~aal~~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~---~~i~~~~ 363 (424)
T 2e7u_A 295 QAGTLS----GNPLAMAAGLATLELLEENPG---YYAYLEDLGARLEAGLKEVLKEKGLPHTVNR-VGSM---ITVFFTE 363 (424)
T ss_dssp CCCTTC----SCHHHHHHHHHHHHHHHHCTH---HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE-ETTE---EEEESSS
T ss_pred cCCCCC----CCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEe-eceE---EEEEEeC
Confidence 001112 233444445555655543 33 3445557778888888763 232 1222 1322 4455542
Q ss_pred ccc--------cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 002263 800 LKN--------TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 856 (946)
Q Consensus 800 ~~~--------~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i 856 (946)
... .......++.++|.++|+.+....+ ..++ ++...|++|+++++++|+++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~--~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 364 GPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF---EAAF--LSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS---SCEE--CCTTCCHHHHHHHHHHHHHH
T ss_pred CCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC---CceE--eeccCCHHHHHHHHHHHHHh
Confidence 000 0011256799999999998754332 2344 45678999999999999875
No 403
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.48 E-value=2.7e-12 Score=147.89 Aligned_cols=272 Identities=15% Similarity=0.124 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHH--HHHHHHhccccCC----------CCEEEEcCCCCHHHHHHHHHhhcCCCe
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAA--EAMAMCNNIQKGK----------KKTFIIASNCHPQTIDICITRADGFDI 169 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~--ea~~la~~~~~~~----------gd~vvv~~~~Hps~~~~~~~~a~~~gi 169 (946)
.++++.+|++++.++.++.+++|+|.++ +.++.++. ...+ ||+|+++...|+.+...++. .|.
T Consensus 81 ~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~-~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~----~g~ 155 (427)
T 3ppl_A 81 VDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYI-FGNNDSVQPWSKEETVKWICPVPGYDRHFSITER----FGF 155 (427)
T ss_dssp HHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHH-HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHH----TTC
T ss_pred HHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHh-ccCCcccccccCCCCCEEEEcCCCcHHHHHHHHH----cCC
Confidence 4577899999999988999999999777 34444432 1002 89999999999998887653 577
Q ss_pred EEEEecc-------ccccc-c-CCCEeEEEEE-cC-CCceeecchH---HHHHHH-HhCCcEEEEEecCcc---ccCCC-
Q 002263 170 KVVVSDL-------KDIDY-K-SGDVCGVLVQ-YP-GTEGEVLDYG---DFIKNA-HANGVKVVMATDLLA---LTILK- 230 (946)
Q Consensus 170 ~v~~~~~-------~~l~~-i-~~~t~~v~v~-~p-n~~G~i~di~---~i~~~a-~~~gal~~v~a~~~a---l~~l~- 230 (946)
+++.+++ ++|++ + ++++++|+++ +| |.+|.+.+.+ +|+++| +++|+++++|. ..+ +..-.
T Consensus 156 ~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De-~y~~~~~~~~~~ 234 (427)
T 3ppl_A 156 EMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDN-AYAVHTLTDEFP 234 (427)
T ss_dssp EEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEEC-TTTTCBSSSCCC
T ss_pred EEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEEC-CCcccccCCCCC
Confidence 8777654 45555 6 4689998866 55 7899998776 888998 99999999953 222 21111
Q ss_pred -C---------CCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccc
Q 002263 231 -P---------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHI 299 (946)
Q Consensus 231 -~---------~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~i 299 (946)
. ++..+.+++++|. |. +.| |-.+|++.+++++++.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~----G~r~G~~~~~~~l~~~~~~~------------------------- 284 (427)
T 3ppl_A 235 EVIDIVGLGEAAGNPNRFWAFTSTSKI-TLA----GAGVSFFLTSAENRKWYTGH------------------------- 284 (427)
T ss_dssp CCCCHHHHHHHTTCTTSEEEEEESTTT-SCT----TSSCEEEECCHHHHHHHHHH-------------------------
T ss_pred CccchhhhhhccCCCCcEEEEechhhc-cCc----CccEEEEEcCHHHHHHHHHH-------------------------
Confidence 0 1244678889887 66 433 34579999888776654110
Q ss_pred cccccCCCccchHHHHHHHHHHHHHHhCh-----hhHHHHHHHHHHHH----HHHHHHHhcCCCEEEcCCCCcCeEEEec
Q 002263 300 RRDKATSNICTAQALLANMAAMYAVYHGP-----EGLKTIAQRVHGLA----GTFALGLKKLGTVEVQGLPFFDTVKVKC 370 (946)
Q Consensus 300 rre~aTsni~t~~~l~a~~aa~y~~~~g~-----~Gl~~i~~~~~~~a----~~l~~~L~~~g~~~~~~~~~~~~~~i~~ 370 (946)
++ ..+ .+++......++ .++.. +-+++..++..+.. +.|.+.|.++|++.+.......-+.+++
T Consensus 285 ~~-~~~--~~~~~~~q~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~ 357 (427)
T 3ppl_A 285 AG-IRG--IGPNKVNQLAHA----RYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDV 357 (427)
T ss_dssp HH-HHC--SCCCHHHHHHHH----HHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEEC
T ss_pred hh-ccc--CCCCHHHHHHHH----HHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEEC
Confidence 00 001 111111111111 11111 12333334444444 4444444444336654322112244555
Q ss_pred CC--HHHHHHHHHHcCCeeee----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 371 AD--AHAIASAAYKIEMNLRV----------VDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 ~~--~~~v~~~L~~~GI~~~~----------~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++ +.++.+.|.++||.+.. ..++.+|+|+... ++++|++.++.|..
T Consensus 358 ~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~ 415 (427)
T 3ppl_A 358 VPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVAT 415 (427)
T ss_dssp STTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHH
Confidence 54 78899999999998865 1257899999655 99999999998863
No 404
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.47 E-value=6.7e-12 Score=143.98 Aligned_cols=332 Identities=14% Similarity=0.074 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHhc--CCcceeecCCCCC-----CCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHH
Q 002263 38 ESQMIEHMQKLASM--NKVYKSFIGMGYY-----NTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIA 109 (946)
Q Consensus 38 e~e~~~~~~~l~~~--n~~~~~~~G~g~~-----~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la 109 (946)
-..+.+.++++..+ +.... -++.|.| +...|+.+.+.+.+... ....|+|. +|.. ++++.++
T Consensus 21 ~~~~~~~~~~~~~~~g~~~~i-~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-----~g~~----~lr~~ia 90 (418)
T 3rq1_A 21 IFVTAGQAQADAKENGRENVV-NGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPI-----AGIP----DFLCAAE 90 (418)
T ss_dssp HHHHHHHHHHHHHHHCGGGCE-ECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCT-----TCCH----HHHHHHH
T ss_pred HHHHHHHHHhhhhhhcCCCeE-ECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCC-----CChH----HHHHHHH
Confidence 44555666666554 22222 2466655 66688888766654321 12345543 2222 3445555
Q ss_pred HHh----CCC-CcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------
Q 002263 110 DLT----GLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-------- 176 (946)
Q Consensus 110 ~L~----g~~-~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-------- 176 (946)
+++ +.+ ..++.+++|+|.+++.++.++. . +||+|+++...|+.+...++ ..|.+++.+++
T Consensus 91 ~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~--~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~v~~~~~~~~~d 163 (418)
T 3rq1_A 91 KECFGNFRPEGHIRSIATAGGTGGIHHLIHNYT-E--PGDEVLTADWYWGAYRVICS----DTGRTLVTYSLFDEHNNFN 163 (418)
T ss_dssp HHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHS-C--TTCEEEEESSCCTHHHHHHH----HTTCEEEEECSBCTTSSBC
T ss_pred HHHhcccCccccccEEECCchHHHHHHHHHHhc-C--CCCEEEECCCCchhHHHHHH----HcCCEEEEEeeeCCCCCcC
Confidence 544 332 1168889999988887766652 3 89999999999998887764 35888888775
Q ss_pred -ccccc-cCC----CEe-EEEEEcC--CCceeecchHHH---HHHHH------hCCcEEEEEecCccccCC--------C
Q 002263 177 -KDIDY-KSG----DVC-GVLVQYP--GTEGEVLDYGDF---IKNAH------ANGVKVVMATDLLALTIL--------K 230 (946)
Q Consensus 177 -~~l~~-i~~----~t~-~v~v~~p--n~~G~i~di~~i---~~~a~------~~gal~~v~a~~~al~~l--------~ 230 (946)
+++++ +.+ +++ ++++.+| |.+|.+.|.+++ +++|+ ++|+++++|.-...+..- .
T Consensus 164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 243 (418)
T 3rq1_A 164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFN 243 (418)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGG
T ss_pred HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHH
Confidence 23444 432 455 7778878 679999875555 55555 899999995311122110 0
Q ss_pred CCCCccce---EEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEecccccccccccc
Q 002263 231 PPGELGAD---IVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK 303 (946)
Q Consensus 231 ~~~~~GaD---i~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~ 303 (946)
....++-| |+++|. |.|+.| |-.+|++.+ ++++.+.+... + ++..+ .
T Consensus 244 ~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~--------------------~-~~~~~-~ 297 (418)
T 3rq1_A 244 KFSHLPKEILTCVCYSLSKGFTMY----GQRVGAMIGISDDEEIADEFFEV--------------------N-KSTSR-A 297 (418)
T ss_dssp GGTTCCTTEEEEEEEESTTTTTCC----SSCCEEEEEEESSHHHHHHHHHH--------------------H-HHHHH-H
T ss_pred HHHhcCCCceEEEEEeCCCCCcCc----CCcceEEEEEeCCHHHHHHHHHH--------------------H-HHHHh-h
Confidence 01112233 667776 877532 234688887 77776654100 0 00000 0
Q ss_pred cCCCccchHHHHHHHHHHH-HHH--hChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-CcCeEEEecCCHHHHHHH
Q 002263 304 ATSNICTAQALLANMAAMY-AVY--HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCADAHAIASA 379 (946)
Q Consensus 304 aTsni~t~~~l~a~~aa~y-~~~--~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~~~~i~~~~~~~v~~~ 379 (946)
.+++..+ .+..++.+++- ..+ .-.+.++++.++..++.+++.+.|+++| +++.... .+ -+.+...++.++.+.
T Consensus 298 ~~~~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~-~~~~~~~~~~~~~~~ 374 (418)
T 3rq1_A 298 TWSNICR-PAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG-LPMLPYRGGF-FITIPTDSANAICEE 374 (418)
T ss_dssp HTSSCCH-HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCSSS-EEEEECTTHHHHHHH
T ss_pred ccCCCch-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCceE-EEEcCCCCHHHHHHH
Confidence 0111211 11112211110 000 0012345667778888899999999887 7765321 12 122344457789999
Q ss_pred HHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 380 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 380 L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
|.++||.+... ++.+|+|+. ..++++++++++.|..
T Consensus 375 l~~~gi~v~~g-~~~iRis~~-~~~~~~i~~~~~~l~~ 410 (418)
T 3rq1_A 375 LKKEHIYVIAL-ANGIRIAAC-GIPKCQMTGLAEKIYN 410 (418)
T ss_dssp HHHTTEECEEC-SSEEEEEGG-GSCHHHHTTHHHHHHH
T ss_pred HHhCCEEEecC-CCCeEEEEe-cCCHHHHHHHHHHHHH
Confidence 99999998763 578999977 5699999999999863
No 405
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.47 E-value=7.2e-12 Score=143.39 Aligned_cols=273 Identities=9% Similarity=0.018 Sum_probs=164.7
Q ss_pred HHHHHHHHHh------CCCCcceEEcccHHHHHHHHHHHhccccCCCC-----EEEEc-CCCCHHHHHHHHHh--hcCCC
Q 002263 103 NFQTMIADLT------GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK-----TFIIA-SNCHPQTIDICITR--ADGFD 168 (946)
Q Consensus 103 e~q~~la~L~------g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd-----~vvv~-~~~Hps~~~~~~~~--a~~~g 168 (946)
++++.+|+++ +.++.++.+++|+|.+++.++.++. . +|| +|+++ ...|+.+...+... ....+
T Consensus 79 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~-~--~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~ 155 (417)
T 3g7q_A 79 ALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFA-G--RRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSAR 155 (417)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-B--C----CCBEEEESSCCCHHHHHC-----CCEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHc-C--CCccCCcceEEEeCCCccccchhhccchhhhcccc
Confidence 4667777776 5677899999999988887766553 2 555 89998 77888776654321 12345
Q ss_pred eEEEEec---------cccccccCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccc-----cCC-
Q 002263 169 IKVVVSD---------LKDIDYKSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLAL-----TIL- 229 (946)
Q Consensus 169 i~v~~~~---------~~~l~~i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al-----~~l- 229 (946)
..+..++ +++++ +++++++|++.+| |.+|.+.+ +++|+++|+++|++++++. ..+. ...
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~-~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De-~~~~~~~~~~~~~ 233 (417)
T 3g7q_A 156 PNIELLPEGQFKYHVDFEHLH-IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDN-AYGVPFPGIIFSE 233 (417)
T ss_dssp CEEEEEGGGEEEEECCGGGCC-CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEEC-TTCTTTTCCBCSC
T ss_pred CcccccCCcccccccCHHHhc-cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeC-CCccccccccccc
Confidence 5555443 33444 5678999999998 67999987 8999999999999999953 2221 111
Q ss_pred CCCCCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCc
Q 002263 230 KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 308 (946)
Q Consensus 230 ~~~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni 308 (946)
..+...+.+++++|. | ++.| |-.+|++.+++++.+.+... ++ .. +.
T Consensus 234 ~~~~~~~~~i~~~s~sK-~~~~----G~r~G~~~~~~~~~~~~~~~-------------------------~~-~~--~~ 280 (417)
T 3g7q_A 234 ARPLWNPNIILCMSLSK-LGLP----GSRCGIIIANDKTITAIANM-------------------------NG-II--SL 280 (417)
T ss_dssp CCCCCCTTEEEEEESGG-GTCT----TSCCEEEECCHHHHHHHHHH-------------------------HH-HH--CC
T ss_pred cccCCCCCEEEEEechh-ccCC----CcceEEEEeCHHHHHHHHHh-------------------------hc-ce--ee
Confidence 123345788999887 6 6432 33478998888877655110 00 00 01
Q ss_pred cchHHHHHHHHHHHHHHhCh-hhHHH-HHHHHHHHHHHHHHHHhc----CCCEEEcCCCCcCeEEEecC--C--HHHHHH
Q 002263 309 CTAQALLANMAAMYAVYHGP-EGLKT-IAQRVHGLAGTFALGLKK----LGTVEVQGLPFFDTVKVKCA--D--AHAIAS 378 (946)
Q Consensus 309 ~t~~~l~a~~aa~y~~~~g~-~Gl~~-i~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~~~~~i~~~--~--~~~v~~ 378 (946)
+++....+.++++ +..... +-+++ +.++..++.+++++.|++ +| +++.......-+.+.++ + ..++.+
T Consensus 281 ~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~l~~ 358 (417)
T 3g7q_A 281 APGGMGPAMMCEM-IKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEER-CLIHKPEGAIFLWLWFKDLPITTELLYQ 358 (417)
T ss_dssp CCCSHHHHHHHHH-HHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTT-CEEECCCBSSEEEEECTTCSSCHHHHHH
T ss_pred CCCcHHHHHHHHH-HcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-ceeeCCCcceEEEEEcCCCCCCHHHHHH
Confidence 1111111111111 121111 11112 444455556666666654 34 66653221112334443 2 788999
Q ss_pred HHHHcCCeeeeec-------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 379 AAYKIEMNLRVVD-------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 379 ~L~~~GI~~~~~~-------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.|.++||.+..-. ++.+|+|++. +++||+++++.|..
T Consensus 359 ~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~ 408 (417)
T 3g7q_A 359 RLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAE 408 (417)
T ss_dssp HHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHH
T ss_pred HHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 9999999875421 3589999985 99999999999974
No 406
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.45 E-value=1.3e-12 Score=150.52 Aligned_cols=245 Identities=16% Similarity=0.102 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHhCCCCcceE-EcccHHHHHHHHHHHhccccCCCCEEEEcC-CCCHHHHHHHH------HhhcCCCeEEE
Q 002263 101 LLNFQTMIADLTGLPMSNAS-LLDEGTAAAEAMAMCNNIQKGKKKTFIIAS-NCHPQTIDICI------TRADGFDIKVV 172 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~s-l~~~~Ta~~ea~~la~~~~~~~gd~vvv~~-~~Hps~~~~~~------~~a~~~gi~v~ 172 (946)
..++++.+++++|.+.+.+. ++.+||.++++++.++. . +||+||++. ..|+++...+. ..++..|++++
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~-~--~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGIL-R--PGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTC-C--TTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred HHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhC-C--CCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 45677899999999864331 25688888777766552 3 899999998 89998887653 22345799999
Q ss_pred Eecc--------ccccc-cCCCEeEEEEEc----C-CCceeecchHHHHHHHHh--CCcEEEEEecCccccCC-CCCCCc
Q 002263 173 VSDL--------KDIDY-KSGDVCGVLVQY----P-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTIL-KPPGEL 235 (946)
Q Consensus 173 ~~~~--------~~l~~-i~~~t~~v~v~~----p-n~~G~i~di~~i~~~a~~--~gal~~v~a~~~al~~l-~~~~~~ 235 (946)
.++. +++++ ++++|++|++++ | +.+|.+.|+++|+++||+ +|++++||. ..+.+.. ..+.++
T Consensus 144 ~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDe-a~~~~~~~~~~~~~ 222 (431)
T 3ht4_A 144 AVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDN-CYGEFIEEQEPCHV 222 (431)
T ss_dssp ECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEEC-TTCTTSSSCCGGGT
T ss_pred EeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeC-CChhhccCCCcccc
Confidence 8876 34556 788999999986 5 468889999999999999 999999953 4444432 456678
Q ss_pred cceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHH
Q 002263 236 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 314 (946)
Q Consensus 236 GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l 314 (946)
|+|++++|. |.|++ .++|..|++++++++++++..+.. .+ .+....+.+... +.
T Consensus 223 g~Di~~~S~sK~lgg---~~~~~GG~v~~~~~li~~l~~~~~--------~~-----------~~g~~~~~~~~~-~~-- 277 (431)
T 3ht4_A 223 GADLMAGSLIKNPGG---GIVKTGGYIVGKEQYVEACAYRLT--------SP-----------GIGAEAGASLYS-LQ-- 277 (431)
T ss_dssp TCSEEEEETTSGGGT---TTCSSCEEEEECHHHHHHHHHHHS--------CT-----------TTTTSCSCCCSC-SH--
T ss_pred CCeEEEcCccccCCC---CCCCceEEEEecHHHHHHHHHHhc--------cC-----------CcccccCccHHH-HH--
Confidence 999999998 88864 122434999999888766521100 00 000111111110 01
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCcC-eEEEecCC---HHHHHHHHHHc
Q 002263 315 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFD-TVKVKCAD---AHAIASAAYKI 383 (946)
Q Consensus 315 ~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~~-~~~i~~~~---~~~v~~~L~~~ 383 (946)
.+..++ +.+..+.++..+++.++++.|+++| +++... +..+ .+.|.+++ +.++.+.|.+.
T Consensus 278 -~~~~~l-------~~~~~~~~~~~~~a~~l~~~L~~~g-~~v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 278 -EMYQGF-------FLAPHVAGQALKGAIFTAAFLEKLG-MNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYA 344 (431)
T ss_dssp -HHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHT-CCEESCTTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred -HHHhHh-------hhHHHHHHHHHHHHHHHHHHHHhCc-CEecCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence 111111 2235566778889999999999988 766422 1111 23444443 45666777665
No 407
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.44 E-value=1.5e-11 Score=141.68 Aligned_cols=280 Identities=13% Similarity=0.043 Sum_probs=175.1
Q ss_pred hhHHHHHHHHHHHHHHHhCCCC---------cceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhc
Q 002263 95 QGRLESLLNFQTMIADLTGLPM---------SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD 165 (946)
Q Consensus 95 qg~l~~l~e~q~~la~L~g~~~---------~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~ 165 (946)
+|..+......+.+++..|.+. .++.+++|++.+++.++.++. . +||+|+++...|+.+...+ +
T Consensus 78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~--~gd~Vlv~~p~y~~~~~~~----~ 150 (425)
T 2r2n_A 78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-N--PGDNVLLDEPAYSGTLQSL----H 150 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC-C--TTCEEEEESSCCHHHHHHH----G
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC-C--CCCEEEEeCCCcHHHHHHH----H
Confidence 3444444444455666678764 478888999988887766652 3 7899999999999887765 3
Q ss_pred CCCeEEEEecc-------ccccc-cC------------CCEeEEEE-EcC-CCceeecchH---HHHHHHHhCCcEEEEE
Q 002263 166 GFDIKVVVSDL-------KDIDY-KS------------GDVCGVLV-QYP-GTEGEVLDYG---DFIKNAHANGVKVVMA 220 (946)
Q Consensus 166 ~~gi~v~~~~~-------~~l~~-i~------------~~t~~v~v-~~p-n~~G~i~di~---~i~~~a~~~gal~~v~ 220 (946)
..|.+++.++. ++|++ +. +++++|++ .+| |.+|.+.+.+ +|+++|+++|+++++|
T Consensus 151 ~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~D 230 (425)
T 2r2n_A 151 PLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIED 230 (425)
T ss_dssp GGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 46888887764 34555 44 46788876 466 7799998654 9999999999999994
Q ss_pred ecCcc---ccCC--CCC---CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEe
Q 002263 221 TDLLA---LTIL--KPP---GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 221 a~~~a---l~~l--~~~---~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~ 291 (946)
+..+ +..- .+. ...+.+++++|. |.|+ | |--+|++++++++++.+...
T Consensus 231 -e~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~----GlRiG~~~~~~~l~~~l~~~----------------- 287 (425)
T 2r2n_A 231 -DPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-S----GLRIGFLTGPKPLIERVILH----------------- 287 (425)
T ss_dssp -CTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-S----TTCCEEEEEEHHHHHHHHHH-----------------
T ss_pred -CCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-C----ccceEEEecCHHHHHHHHHH-----------------
Confidence 3322 1111 111 123456888887 8764 2 22369999998876654100
Q ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHhC----hhhHHHHHHHHHHHHHHHHHHHhc-CCCE-EEcCCCCcCe
Q 002263 292 MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG----PEGLKTIAQRVHGLAGTFALGLKK-LGTV-EVQGLPFFDT 365 (946)
Q Consensus 292 l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g----~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~-~~~~~~~~~~ 365 (946)
+ .....+.|. ....++.++ +...+ .+-++++.++..++.+++.+.|++ ++++ .+.......-
T Consensus 288 ---~----~~~~~~~~~---~~q~a~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~ 355 (425)
T 2r2n_A 288 ---I----QVSTLHPST---FNQLMISQL--LHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMF 355 (425)
T ss_dssp ---H----HTTTCSSCH---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSE
T ss_pred ---H----HHhcCCCCH---HHHHHHHHH--HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEE
Confidence 0 000011111 111122222 22222 133566777778888899999987 4225 3432211112
Q ss_pred EEEecCC---HHH-HHHHHHHcCCeeeee---------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 366 VKVKCAD---AHA-IASAAYKIEMNLRVV---------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 366 ~~i~~~~---~~~-v~~~L~~~GI~~~~~---------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.+.+++ ..+ +.+.|.++||.+... ..+.+|+|++. .++++++++++.|+.
T Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~ 419 (425)
T 2r2n_A 356 LWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQ 419 (425)
T ss_dssp EEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHH
Confidence 3344442 444 688888999987542 13689999984 599999999999863
No 408
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.44 E-value=7.3e-12 Score=144.11 Aligned_cols=276 Identities=14% Similarity=0.074 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc-c--c-CCC-CEEEEcCC-CCHHHHHHHHHhh--------c
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-Q--K-GKK-KTFIIASN-CHPQTIDICITRA--------D 165 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~-~--~-~~g-d~vvv~~~-~Hps~~~~~~~~a--------~ 165 (946)
...++++.+++++|. .++.++++||.++++++.+.+. . + .++ ++||+.+. .|..+...+.... .
T Consensus 100 ~~~~l~~~la~~~g~--~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~ 177 (420)
T 2pb2_A 100 PALRLGRKLIDATFA--ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFG 177 (420)
T ss_dssp HHHHHHHHHHHHSSC--SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSS
T ss_pred HHHHHHHHHHhhCCC--CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCC
Confidence 445677899999985 4688999999888877655431 0 0 034 58887765 5554444332110 0
Q ss_pred CCCeEEEEe---ccccccc-cCCCEeEEEEEcC-CCcee----ecchHHHHHHHHhCCcEEEEEecCc-cccCCCCCC--
Q 002263 166 GFDIKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGE----VLDYGDFIKNAHANGVKVVMATDLL-ALTILKPPG-- 233 (946)
Q Consensus 166 ~~gi~v~~~---~~~~l~~-i~~~t~~v~v~~p-n~~G~----i~di~~i~~~a~~~gal~~v~a~~~-al~~l~~~~-- 233 (946)
+....+..+ |+++|++ +++++++|++..+ |..|. ..++++|.++|+++|+++++|. .. .++......
T Consensus 178 p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~De-v~~g~~~~g~~~~~ 256 (420)
T 2pb2_A 178 PKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDE-VQCGMGRTGDLFAY 256 (420)
T ss_dssp SCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEEC-TTTTTTTTSSSSHH
T ss_pred CCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEc-CCcCcccCCcHHHH
Confidence 111224444 4566777 7888999988766 45565 3589999999999999999953 22 232111111
Q ss_pred ---CccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccc
Q 002263 234 ---ELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 310 (946)
Q Consensus 234 ---~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t 310 (946)
....|+++. +|.|+. |-..|++.+++++.+.+.... . ..|.+. +
T Consensus 257 ~~~~~~~diit~-sK~l~~-----G~~iG~~~~~~~l~~~l~~~~----------~----------------~~t~~~-~ 303 (420)
T 2pb2_A 257 MHYGVTPDILTS-AKALGG-----GFPVSAMLTTQEIASAFHVGS----------H----------------GSTYGG-N 303 (420)
T ss_dssp HHHTCCCSEEEE-CGGGGT-----TSCCEEEEECHHHHTTCC------------------------------CCEECC-C
T ss_pred HhcCCCCCeEEe-cccccC-----CCceEEEEEhHHHHHhhcCCC----------c----------------CcccCc-C
Confidence 134688754 488852 234788888888777663210 0 001001 0
Q ss_pred hHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC--C--CEEEcCCCCcCeEEEecC-----CHHHHHHHHH
Q 002263 311 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL--G--TVEVQGLPFFDTVKVKCA-----DAHAIASAAY 381 (946)
Q Consensus 311 ~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~--g--~~~~~~~~~~~~~~i~~~-----~~~~v~~~L~ 381 (946)
+....+..++ +..+.. +++.++..++.++|++.|+++ + .+.... +...-+.+.++ ...++.+.|.
T Consensus 304 ~~~~aa~~a~--L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~l~ 377 (420)
T 2pb2_A 304 PLACAVAGAA--FDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIR-GMGLLIGAELKPKYKGRARDFLYAGA 377 (420)
T ss_dssp HHHHHHHHHH--HHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE-EETTEEEEEECGGGTTCHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-ecceEEEEEECCCchHHHHHHHHHHH
Confidence 0111122222 244433 356677788888898888765 2 122111 11112333332 2678999999
Q ss_pred HcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 382 KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 382 ~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++||.+....++.+|++++..+|++|+++++++|..
T Consensus 378 ~~Gi~v~~~~~~~iRl~~~~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 378 EAGVMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp HTTEECEESSTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HCCCEEEeCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 999998775568899999999999999999999974
No 409
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.44 E-value=8.8e-12 Score=142.75 Aligned_cols=332 Identities=12% Similarity=0.060 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHhc--CCcceeecCCCCC-----CCCCcHHHHHHHHhCCc-cccccCCChhhhhhhHHHHHHHHHHHHH
Q 002263 38 ESQMIEHMQKLASM--NKVYKSFIGMGYY-----NTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIA 109 (946)
Q Consensus 38 e~e~~~~~~~l~~~--n~~~~~~~G~g~~-----~~~~p~~i~~~i~~~~~-~~t~~~pyq~e~sqg~l~~l~e~q~~la 109 (946)
-.++.+.++++.++ +....+ ++.|.| +...|+.+.+.+.+... ....|+|. +|.. ++++.++
T Consensus 20 ~~~~~~~~~~~~~~~g~~~~i~-l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~-----~g~~----~lr~~la 89 (413)
T 3t18_A 20 AFDINNKANAAIEKYGREAVIN-AALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPI-----EGEK----DYRKIVI 89 (413)
T ss_dssp HHHHHHHHHHHHHHHCGGGCEE-CCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCT-----TCCH----HHHHHHH
T ss_pred HHHHHHHHhhhhhhccccceEe-ccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCC-----CCCH----HHHHHHH
Confidence 44555666655544 222222 355554 55677777766554321 12345432 2322 2334455
Q ss_pred HHh-CCC-Cc---ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc--------
Q 002263 110 DLT-GLP-MS---NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-------- 176 (946)
Q Consensus 110 ~L~-g~~-~~---~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-------- 176 (946)
+.+ +.. +. ++.+++|+|.+++.++.++. . +||+|+++...|+.+...++. .|.+++.+++
T Consensus 90 ~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~-~--~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~d 162 (413)
T 3t18_A 90 DTLFGPYKPEGYISAIATPGGTGAIRSAIFSYL-D--EGDPLICHDYYWAPYRKICEE----FGRNFKTFEFFTDDFAFN 162 (413)
T ss_dssp HHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHC-C--SSCEEEEESSCCTHHHHHHHH----HTCEEEEECCBCTTSSBC
T ss_pred HHHhcccCccccCcEEEcCccHHHHHHHHHHhc-C--CCCEEEECCCCcccHHHHHHH----hCCeEEEeeccCCCCCcC
Confidence 433 221 23 78889999988887766552 3 899999999999998887653 4778887765
Q ss_pred -ccccc-cCC----CEe-EEEEEcC--CCceeecchHHHH---HHHH------hCCcEEEEEecCccccCCCC-C-----
Q 002263 177 -KDIDY-KSG----DVC-GVLVQYP--GTEGEVLDYGDFI---KNAH------ANGVKVVMATDLLALTILKP-P----- 232 (946)
Q Consensus 177 -~~l~~-i~~----~t~-~v~v~~p--n~~G~i~di~~i~---~~a~------~~gal~~v~a~~~al~~l~~-~----- 232 (946)
++|++ +.+ +++ ++++.+| |.+|.+.+.+++. ++|+ ++|+++++|.-...++.-.. .
T Consensus 163 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 242 (413)
T 3t18_A 163 IDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFE 242 (413)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGG
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHH
Confidence 23444 433 566 6777877 6799998765555 5555 89999999531122221110 0
Q ss_pred --CCccce---EEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEecccccccccccc
Q 002263 233 --GELGAD---IVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK 303 (946)
Q Consensus 233 --~~~GaD---i~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~ 303 (946)
..++-| ++++|. |.|+.| |-.+|++.+ ++++.+.+... + +...+ .
T Consensus 243 ~~~~~~~~~~~i~~~S~sK~~~~~----G~riG~~~~~~~~~~~~~~~~~~--------------------~-~~~~~-~ 296 (413)
T 3t18_A 243 KFSNLPRNLFVVVAFSMSKSHTAY----GLRSGAAVGISSSKEIIEEFEAS--------------------L-AHSAR-C 296 (413)
T ss_dssp GGTTCCTTEEEEEEEEHHHHTTCG----GGCCEEEEEEESCHHHHHHHHHH--------------------H-HHHHH-H
T ss_pred HHhhcCCCeeEEEEEecCccCCCc----CcCcEEEEEecCCHHHHHHHHHH--------------------H-HHhhh-c
Confidence 112223 667776 887543 223689888 77776655100 0 00000 0
Q ss_pred cCCCccchHHHHHHHHHH-HHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-CcCeEEEecCCHHHHHHHH
Q 002263 304 ATSNICTAQALLANMAAM-YAVYH-GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCADAHAIASAA 380 (946)
Q Consensus 304 aTsni~t~~~l~a~~aa~-y~~~~-g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~~~~~i~~~~~~~v~~~L 380 (946)
.+++.. ..+..++.+++ ...+. -.+.++++.++..++.+++.+.|+++| +++.... .+- +.+...+..++.+.|
T Consensus 297 ~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~-~~~~~~~~~~~~~~l 373 (413)
T 3t18_A 297 NWSNGT-HAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENK-LTMIPYFGGFF-TFIPTDKAFDIVKDL 373 (413)
T ss_dssp HTSSCC-HHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCBCCCSSSC-EEEECSCHHHHHHHH
T ss_pred cccCCC-hHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCccCCCceEE-EEeCCCCHHHHHHHH
Confidence 111111 11111111111 00000 012345677778888899999999987 7766321 121 223444478899999
Q ss_pred HHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 381 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 381 ~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.++||.+..- ++.+|+|+...++++.++++.+++.
T Consensus 374 ~~~gv~v~~g-~~~iRis~~~~~~~~~l~~l~~~l~ 408 (413)
T 3t18_A 374 EKENIFTIPS-AKGIRVAICGVGEEKIPKLVQRLAF 408 (413)
T ss_dssp HHTTEECEEC-SSEEEECTTTSCGGGHHHHHHHHHH
T ss_pred HhCCEEEecC-CCceEEEEeeCCHHHHHHHHHHHHH
Confidence 9999998763 6789999986666555666666553
No 410
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.42 E-value=4.3e-12 Score=142.16 Aligned_cols=304 Identities=14% Similarity=0.127 Sum_probs=177.6
Q ss_pred eeecCCCCCCCCCcHHHHHHHHhCCc---cccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHH
Q 002263 56 KSFIGMGYYNTHVPPVILRNIMENPA---WYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 132 (946)
Q Consensus 56 ~~~~G~g~~~~~~p~~i~~~i~~~~~---~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~ 132 (946)
.+|+|.|.+|. ++.++. .+.+.-+ ....|++ . ....++++.+++++|.+. ..++.+||.+.+.+
T Consensus 12 ~~~l~~~~~p~-~~~~~~-~~~~~~~~~~~~~~y~~---~------~~~~~l~~~la~~~~~~~--~i~~~~G~~a~~~a 78 (357)
T 3lws_A 12 TTGQISGHGKR-NVGVLK-TAFAAVADEMASDQYGT---G------AIIEPFEQKFADVLGMDD--AVFFPSGTMAQQVA 78 (357)
T ss_dssp CSEESSBSSCC-BHHHHH-HHHTTSCTTCBCEETTE---E------TTHHHHHHHHHHHHTCSE--EEEESCHHHHHHHH
T ss_pred hcccccCCCCC-CHHHHH-HHHHHhhcccCcccccC---C------hHHHHHHHHHHHHhCCCc--EEEecCcHHHHHHH
Confidence 46889997763 334443 4554311 1122221 0 123467789999999864 45668888777665
Q ss_pred HHHhccccCCCC--EEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc-------ccccccCCCEeEEEEEcCC-Cc-eeec
Q 002263 133 AMCNNIQKGKKK--TFIIASNCHPQTIDICITRADGFDIKVVVSDL-------KDIDYKSGDVCGVLVQYPG-TE-GEVL 201 (946)
Q Consensus 133 ~la~~~~~~~gd--~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~-------~~l~~i~~~t~~v~v~~pn-~~-G~i~ 201 (946)
+.++. . ++| .|+++...|++....... +...|++++.++. +++++. .++++|++.+|+ .+ |.+.
T Consensus 79 l~~~~-~--~gd~~~vi~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~~d~~~l~~~-~~~~~v~~~~p~np~~G~~~ 153 (357)
T 3lws_A 79 LRIWS-D--ETDNRTVAYHPLCHLEIHEQDGL-KELHPIETILVGAADRLMTLDEIKAL-PDIACLLLELPQREIGGVAP 153 (357)
T ss_dssp HHHHH-H--HHTCCEEEECTTCHHHHSSTTHH-HHHSSCEEEECSCTTSCCCHHHHHTC-CSCSEEEEESSBGGGTSBCC
T ss_pred HHHHh-h--cCCCcEEEecccceeeeeccchh-hhccCcEEEEecCCCCCcCHHHHhcC-cCcceEEEEcccccCCceeC
Confidence 55443 2 455 788888888876542100 1124888887764 334432 248899999994 55 8876
Q ss_pred ---chHHHHHHHHhCCcEEEEEe-cCc-cccCC-CCCCC--ccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCC
Q 002263 202 ---DYGDFIKNAHANGVKVVMAT-DLL-ALTIL-KPPGE--LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 272 (946)
Q Consensus 202 ---di~~i~~~a~~~gal~~v~a-~~~-al~~l-~~~~~--~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp 272 (946)
++++|+++|+++|+++++|. +.. ..... .+... .++|+++.|. |.|++| ..|++..++++++.+.
T Consensus 154 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~------~gg~~~~~~~~~~~~~ 227 (357)
T 3lws_A 154 AFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGI------AGAILAGPAAFCQTAR 227 (357)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCS------SCEEEEECHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCC------ceEEEEcCHHHHHHHH
Confidence 59999999999999999953 210 01111 11111 3579988887 877543 3388988887776541
Q ss_pred CceEeEeecCCCCcceEEecccccccccccccCCCccchHHHH-HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 002263 273 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL-ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK 351 (946)
Q Consensus 273 ~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~-a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~ 351 (946)
. + +...+ .+..+...+. +..+++ ..+ ++.+ ++..++++++.+.|++
T Consensus 228 ~--------------~-----------~~~~~-~~~~~~~~~~~~~~~~l--~~~----~~~~-~~~~~~~~~l~~~L~~ 274 (357)
T 3lws_A 228 I--------------W-----------KRRYG-GDLISLYPYIVSADYYY--ELR----KDRM-GQYYEQAKQLAEQFNA 274 (357)
T ss_dssp H--------------H-----------HHHTT-CCCSCCHHHHHHHHHHH--HHH----TTCH-HHHHHHHHHHHHHHHT
T ss_pred H--------------H-----------HHHhc-CCcccchHHHHHHHHHH--HHH----HHHH-HHHHHHHHHHHHHHHh
Confidence 0 0 00000 0111111111 111111 111 1222 2346678899999999
Q ss_pred CCCEEEc-CCCCcCeEEEecCC-----HHHHHHHHHHcCCeeeee---cCC--eEEEEeccC---CCHHHHHHHHHHHh
Q 002263 352 LGTVEVQ-GLPFFDTVKVKCAD-----AHAIASAAYKIEMNLRVV---DSN--TVTASFDET---TTLEDVDKLFIVFA 416 (946)
Q Consensus 352 ~g~~~~~-~~~~~~~~~i~~~~-----~~~v~~~L~~~GI~~~~~---~~~--~lris~~~~---~t~edid~ll~~l~ 416 (946)
++++++. ..+..+-+.+.++. ..++.+.|.++||.++.. .++ .+|++++.. .+.+++++.++.|.
T Consensus 275 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~ 353 (357)
T 3lws_A 275 LPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLR 353 (357)
T ss_dssp STTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHH
T ss_pred CCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHH
Confidence 8339884 33333334444432 467889999999987643 133 789988754 57888888888775
No 411
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.42 E-value=6.2e-12 Score=145.59 Aligned_cols=273 Identities=14% Similarity=0.106 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-c--c-c--CCC-CEEEEcC-CCCHHHHHHHHHhhc-------
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-I--Q-K--GKK-KTFIIAS-NCHPQTIDICITRAD------- 165 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~--~-~--~~g-d~vvv~~-~~Hps~~~~~~~~a~------- 165 (946)
..++++.+++++|.+ ++.++++||.++++++.+.+ + . + .+| ++||+.+ ..|..+...+.. ..
T Consensus 120 ~~~l~~~la~~~g~~--~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~-~g~~~~~~~ 196 (439)
T 2oat_A 120 LGEYEEYITKLFNYH--KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISS-STDPTSYDG 196 (439)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTT-CCCHHHHTT
T ss_pred HHHHHHHHHHhcCCC--EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhc-CCChhcccC
Confidence 345667889999854 58889999988887765433 1 0 0 134 7888776 555655544421 11
Q ss_pred --CCCeEEEEec---cccccc-c-CCCEeEEEEEcC-CCceeec----chHHHHHHHHhCCcEEEEEecCc-cccCCCCC
Q 002263 166 --GFDIKVVVSD---LKDIDY-K-SGDVCGVLVQYP-GTEGEVL----DYGDFIKNAHANGVKVVMATDLL-ALTILKPP 232 (946)
Q Consensus 166 --~~gi~v~~~~---~~~l~~-i-~~~t~~v~v~~p-n~~G~i~----di~~i~~~a~~~gal~~v~a~~~-al~~l~~~ 232 (946)
+....+..++ +++|++ + ++++++|++... +.+|.+. ++++|.++|+++|+++++|. .. .++.....
T Consensus 197 ~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE-v~~g~g~~g~~ 275 (439)
T 2oat_A 197 FGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADE-IQTGLARTGRW 275 (439)
T ss_dssp SCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEEC-TTTTTTTTSSS
T ss_pred CCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec-cccCCccCCcc
Confidence 1113444444 456666 7 467888777543 4578776 89999999999999999942 22 23211111
Q ss_pred ---CCc--cceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 233 ---GEL--GADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 233 ---~~~--GaDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
..+ ..|++. -+|.|++ | -.+|++++++++.+.+... .. ..|.
T Consensus 276 ~~~~~~~~~~Di~t-~sK~l~~-----G~~~~G~v~~~~~~~~~l~~~----------~~----------------~~t~ 323 (439)
T 2oat_A 276 LAVDYENVRPDIVL-LGKALSG-----GLYPVSAVLCDDDIMLTIKPG----------EH----------------GSTY 323 (439)
T ss_dssp SGGGGGTCCCSEEE-ECGGGGT-----TSSCCEEEEECHHHHTTSCTT----------SS----------------CCSS
T ss_pred hhHHHhCCCCcEEE-ecccccC-----CCCCeEEEEECHHHHhccCCC----------Cc----------------ccCC
Confidence 122 368763 3488752 2 2368899998887766221 00 0111
Q ss_pred CccchH-HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEc----CCCCcCeEEEecC--C-HHHHHH
Q 002263 307 NICTAQ-ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ----GLPFFDTVKVKCA--D-AHAIAS 378 (946)
Q Consensus 307 ni~t~~-~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~----~~~~~~~~~i~~~--~-~~~v~~ 378 (946)
+.+. +..+..+++ ..+..+ ++.++..++.++++++|++++ +.++ +...+-.+.+... . +.++.+
T Consensus 324 --~~~~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~l~~~L~~l~-~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~ 395 (439)
T 2oat_A 324 --GGNPLGCRVAIAAL--EVLEEE---NLAENADKLGIILRNELMKLP-SDVVTAVRGKGLLNAIVIKETKDWDAWKVCL 395 (439)
T ss_dssp --TTCHHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHTTSC-TTTEEEEEEETTEEEEEECCCSSCCHHHHHH
T ss_pred --CcCHHHHHHHHHHH--HHHhhh---hHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeeeeEEEEEEecCccHHHHHHHH
Confidence 1111 111222222 333222 456778889999999999874 3321 1111212333222 2 678999
Q ss_pred HHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 379 AAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 379 ~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+|.++||.+....++.+|++++..+|++|+++++++|..
T Consensus 396 ~l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 434 (439)
T 2oat_A 396 RLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINK 434 (439)
T ss_dssp HHHHTTEECCBSSSSEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHCCeEEecCCCCEEEEECccCCCHHHHHHHHHHHHH
Confidence 999999998865568899999999999999999999863
No 412
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.42 E-value=1.2e-11 Score=142.92 Aligned_cols=275 Identities=14% Similarity=0.132 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-c--c-c--CCC-CEEEEcCCC-CHHHHHHHHHhhc-------
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-I--Q-K--GKK-KTFIIASNC-HPQTIDICITRAD------- 165 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~--~-~--~~g-d~vvv~~~~-Hps~~~~~~~~a~------- 165 (946)
..++++.+++++|.+ ++.++++||.++++++.+.+ + . + .+| ++||+.+.. |..+...+.....
T Consensus 109 ~~~l~~~la~~~g~~--~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~ 186 (433)
T 1z7d_A 109 LGICERYLTNLLGYD--KVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 186 (433)
T ss_dssp HHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHhhcCCC--eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccC
Confidence 445668899999854 58899999988887765432 1 0 0 145 889888755 4444433321100
Q ss_pred -CCCeEEEEec---cccccc-c-CCCEeEEEEEcC-CCceeec----chHHHHHHHHhCCcEEEEEecCc-cccCCCCC-
Q 002263 166 -GFDIKVVVSD---LKDIDY-K-SGDVCGVLVQYP-GTEGEVL----DYGDFIKNAHANGVKVVMATDLL-ALTILKPP- 232 (946)
Q Consensus 166 -~~gi~v~~~~---~~~l~~-i-~~~t~~v~v~~p-n~~G~i~----di~~i~~~a~~~gal~~v~a~~~-al~~l~~~- 232 (946)
+....+..++ +++|++ + ++++++|++... +.+|.+. ++++|.++|+++|+++++|. .. .++.....
T Consensus 187 ~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE-v~~g~g~~g~~~ 265 (433)
T 1z7d_A 187 GPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADE-VQTGLGRTGKLL 265 (433)
T ss_dssp -----CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEEC-TTTTTTTTSSSS
T ss_pred CCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEec-CccCCCcCCcch
Confidence 0112444444 456666 7 578888776643 4578876 89999999999999999942 32 23211111
Q ss_pred --C--CccceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 233 --G--ELGADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 233 --~--~~GaDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
. ....|+++. +|.|+ || -.+|++++++++.+.+... .. ..|.+
T Consensus 266 ~~~~~~~~~di~t~-sK~l~-----~G~~~~G~v~~~~~~~~~l~~~----------~~----------------~~t~~ 313 (433)
T 1z7d_A 266 CVHHYNVKPDVILL-GKALS-----GGHYPISAVLANDDIMLVIKPG----------EH----------------GSTYG 313 (433)
T ss_dssp GGGGGTCCCSEEEE-CGGGG-----TTSSCCEEEEECHHHHTTCCTT----------CC----------------CCTTT
T ss_pred hhHhcCCCCCEEEE-Ccccc-----CCCCCeEEEEECHHHHhhhccc----------cc----------------cccCC
Confidence 1 124687733 48875 22 1268888998887766321 00 11111
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC--CCEEEcC--CCCcCeEEEecC----CHHHHHHH
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL--GTVEVQG--LPFFDTVKVKCA----DAHAIASA 379 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~--g~~~~~~--~~~~~~~~i~~~----~~~~v~~~ 379 (946)
. ++.+..+..+++ ..+..+ ++.++..++.++++++|+++ + +.++. .....-+.+.++ .+.++.+.
T Consensus 314 ~-~~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~ 386 (433)
T 1z7d_A 314 G-NPLAASICVEAL--NVLINE---KLCENAEKLGGPFLENLKRELKD-SKIVRDVRGKGLLCAIEFKNELVNVLDICLK 386 (433)
T ss_dssp T-CHHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHHHHHTT-CTTEEEEEEETTEEEEEECTTTCCHHHHHHH
T ss_pred C-CHHHHHHHHHHH--HHHHhc---cHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeeeeEEEEEEccChhHHHHHHHH
Confidence 1 111121222222 333222 45667778888998888765 3 32110 011112333332 26789999
Q ss_pred HHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 380 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 380 L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
|.++||.+.....+.+|++++..+|++|+++++++|..
T Consensus 387 l~~~Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 424 (433)
T 1z7d_A 387 LKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVK 424 (433)
T ss_dssp HHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHCCeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 99999998876568999999999999999999999963
No 413
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.41 E-value=7e-12 Score=144.99 Aligned_cols=274 Identities=9% Similarity=0.024 Sum_probs=164.9
Q ss_pred HHHHHHHHHHh------CCCCcceEEcccHHHHHHHHHHHhccccCCCC--------------EEEEc-CCCCHHHHHHH
Q 002263 102 LNFQTMIADLT------GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK--------------TFIIA-SNCHPQTIDIC 160 (946)
Q Consensus 102 ~e~q~~la~L~------g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd--------------~vvv~-~~~Hps~~~~~ 160 (946)
.++++.+|+++ +.++.++.+++|+|.+.+.++.++. . +|| +||++ ...|+.+...+
T Consensus 86 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~-~--~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~ 162 (444)
T 3if2_A 86 SAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFG-G--AFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVH 162 (444)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSS-E--EEECC-------CEEEEEEEESSSSCCGGGTTCC
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHh-C--CCccccccccccccccceEEEeCCCCccchhhcc
Confidence 34667777776 5677899999999988887766653 2 555 78886 66777665532
Q ss_pred HH--hhcCCCeEEEEec-------------cccccc----cCCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEE
Q 002263 161 IT--RADGFDIKVVVSD-------------LKDIDY----KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKV 217 (946)
Q Consensus 161 ~~--~a~~~gi~v~~~~-------------~~~l~~----i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~ 217 (946)
.. .....|..++.++ +++|++ +++++++|++++| |.+|.+.| +++|+++|+++|+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~l 242 (444)
T 3if2_A 163 VEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPL 242 (444)
T ss_dssp SSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCE
T ss_pred cccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEE
Confidence 10 1234566665544 344544 3678999999988 67999988 899999999999999
Q ss_pred EEEecCccc-----cCC-CCCCCccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEe
Q 002263 218 VMATDLLAL-----TIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 218 ~v~a~~~al-----~~l-~~~~~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~ 291 (946)
+++. ..+. ... ..+...+.+++++|..|++.| |-.+|++.+++++.+.+...
T Consensus 243 i~De-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----G~r~G~~~~~~~l~~~~~~~----------------- 300 (444)
T 3if2_A 243 IIDN-AYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLP----GMRTGIIVADAKVIEAVSAM----------------- 300 (444)
T ss_dssp EEEC-TTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCG----GGCCEEEECCHHHHHHHHHH-----------------
T ss_pred EEEC-CCCCcccccccccccccCCCCEEEEechhhccCC----CCceEEEEECHHHHHHHHHH-----------------
Confidence 9953 2221 111 122345788999998334432 34578998888877655110
Q ss_pred ccccccccccc-ccCCCccchHHHHHHHHHHHHHHhCh--hhHHH-HHHHHHHHHHHHHHHHh----cCCCEEEcCCCCc
Q 002263 292 MQTREQHIRRD-KATSNICTAQALLANMAAMYAVYHGP--EGLKT-IAQRVHGLAGTFALGLK----KLGTVEVQGLPFF 363 (946)
Q Consensus 292 l~tre~~irre-~aTsni~t~~~l~a~~aa~y~~~~g~--~Gl~~-i~~~~~~~a~~l~~~L~----~~g~~~~~~~~~~ 363 (946)
++. ..+.+. ....+..+.+ . .+. +-+++ +.++..++.+++++.|. .++ +.+......
T Consensus 301 --------~~~~~~~~~~---~~~~a~~~~l--~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~g 365 (444)
T 3if2_A 301 --------NAVVNLAPTR---FGAAIATPLV--A-NDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYP-LMIHKPEGA 365 (444)
T ss_dssp --------HHHHHSSCCC---HHHHHHHHHH--H-TSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSS-EEEECCCBS
T ss_pred --------HHhccCCCCh---HHHHHHHHHH--H-cCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-ceEecCCcc
Confidence 000 001111 1111111111 1 110 01111 33344444455555544 345 666532211
Q ss_pred CeEEEecC--C--HHHHHHHHHHcCCeeeeec--------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 364 DTVKVKCA--D--AHAIASAAYKIEMNLRVVD--------------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 364 ~~~~i~~~--~--~~~v~~~L~~~GI~~~~~~--------------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..+.+.++ + ..++.+.|.++||.+.... .+.+|+|++. ++++|+++++.|..
T Consensus 366 ~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~ 435 (444)
T 3if2_A 366 IFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGE 435 (444)
T ss_dssp SEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHH
Confidence 12333333 2 7889999999999876421 1579999997 99999999999974
No 414
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.40 E-value=1.1e-11 Score=144.02 Aligned_cols=271 Identities=12% Similarity=0.018 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCC-HHHHHHHHHhhcCCCeEEEEeccc--
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCH-PQTIDICITRADGFDIKVVVSDLK-- 177 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~H-ps~~~~~~~~a~~~gi~v~~~~~~-- 177 (946)
..++++.+|+++|.+ ++.++.+||.+++.++.++ .. +|| +++...| +++...++ ..|.+++.++++
T Consensus 77 ~~~l~~~la~~~~~~--~~~~~~~gt~a~~~al~~l-~~--~gd--i~~~~~~~~~~~~~~~----~~G~~~~~v~~~~~ 145 (456)
T 2ez2_A 77 FYHLERTVQELFGFK--HIVPTHQGRGAENLLSQLA-IK--PGQ--YVAGNMYFTTTRYHQE----KNGAVFVDIVRDEA 145 (456)
T ss_dssp HHHHHHHHHHHHCCS--EEEEESSHHHHHHHHHHHH-CC--TTC--EEEESSCCHHHHHHHH----HTTCEEEECBCGGG
T ss_pred HHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHh-CC--CCC--EeccccccchhHHHHH----HcCCEEEEeccccc
Confidence 456778999999976 5888999998888776665 23 778 6666666 88777664 357787776543
Q ss_pred ----------------cccc-cCCCE----eEEEEEcC-C-Cceeecc---hHHHHHHHHhCCcEEEEEecCcccc----
Q 002263 178 ----------------DIDY-KSGDV----CGVLVQYP-G-TEGEVLD---YGDFIKNAHANGVKVVMATDLLALT---- 227 (946)
Q Consensus 178 ----------------~l~~-i~~~t----~~v~v~~p-n-~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~---- 227 (946)
+|++ +++++ ++|++++| | .+|.+.| +++|+++|+++|+++++|. ..+.|
T Consensus 146 ~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De-~~~~g~~~~ 224 (456)
T 2ez2_A 146 HDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDA-TRCVENAYF 224 (456)
T ss_dssp GCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEEC-TTHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEc-ccccccccc
Confidence 3344 44444 88889988 4 6898876 9999999999999999953 33442
Q ss_pred -----CCCC-CC--------CccceEEEeccccccccCCCCCCceEEEEE-chhhhhcCCCceEeEeecCCCCcceEEec
Q 002263 228 -----ILKP-PG--------ELGADIVVGSAQRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAM 292 (946)
Q Consensus 228 -----~l~~-~~--------~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l 292 (946)
.... .. ....|+++.|+|++++ .|.+|++++ ++++.+.+.... . . +
T Consensus 225 ~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-----~~~gG~~~~~~~~~~~~~~~~~-----~----~-~---- 285 (456)
T 2ez2_A 225 IKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-----VNIGGFLCMNDDEMFSSAKELV-----V----V-Y---- 285 (456)
T ss_dssp HHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-----CSSCEEEEESCHHHHHHHHHHH-----H----H-H----
T ss_pred ccccccccCCcchhhhhhhhcccCCEEEEeCcccCC-----CCceeEEEECCHHHHHHHHHHH-----h----h-c----
Confidence 1111 10 1236998887777643 123588888 466665441000 0 0 0
Q ss_pred ccccccccccccCCCccchHHHHHHHHHHHHHHhChhhH-HHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeEEEec-
Q 002263 293 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL-KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC- 370 (946)
Q Consensus 293 ~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl-~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~~i~~- 370 (946)
. .. ...+..|. ..+.++ ++ ... +.+ ++..++..++++++++.|++.| +++..+.....+.+..
T Consensus 286 --~--~~-~~~~~~~~---~~~~a~--a~--~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~~~~~~~~~~~ 350 (456)
T 2ez2_A 286 --E--GM-PSYGGLAG---RDMEAM--AI--GLR--EAMQYEYIEHRVKQVRYLGDKLKAAG-VPIVEPVGGHAVFLDAR 350 (456)
T ss_dssp --T--CC-TTTTTCCH---HHHHHH--HH--HHH--HHTCHHHHHHHHHHHHHHHHHHHHTT-CCBCSSCCSSEEEEEHH
T ss_pred --c--Cc-ccccCcch---hHHHHH--HH--HHH--HHhHHHHHHHHHHHHHHHHHHHhcCC-CccccCCCceEEEEEhH
Confidence 0 00 00011111 122121 11 111 222 4556667788899999999876 7765332222233332
Q ss_pred ---CC--HHHH-----HHHH-HHcCCeeeee-----------------cCCeEEEEeccC-CCHHHHHHHHHHHhC
Q 002263 371 ---AD--AHAI-----ASAA-YKIEMNLRVV-----------------DSNTVTASFDET-TTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 ---~~--~~~v-----~~~L-~~~GI~~~~~-----------------~~~~lris~~~~-~t~edid~ll~~l~~ 417 (946)
++ ..++ .++| .++||.+... ..+.+|+|++.. ++++|+++++++|..
T Consensus 351 ~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~ 426 (456)
T 2ez2_A 351 RFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIK 426 (456)
T ss_dssp HHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred HhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 21 3344 6777 5779864211 126899999987 899999999999973
No 415
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.40 E-value=7.4e-12 Score=148.78 Aligned_cols=281 Identities=10% Similarity=0.045 Sum_probs=158.8
Q ss_pred CCCEEEEcCCCCCCCHHHHHH--cCCEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccc--cCHHH
Q 002263 567 HRNVCIIPVSAHGTNPATAAM--CGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDE 639 (946)
Q Consensus 567 ~~~~Ili~~saHg~~~~~a~~--~G~~vv~v~~~~~--g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~--~~i~~ 639 (946)
++++|+++...|..+...+.+ .|++++.++++++ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++
T Consensus 193 ~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~p~NPtG~~~~~~~l~~ 269 (546)
T 2zy4_A 193 AGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD---PAIKIFFCVNPSNPPSVKMDQRSLER 269 (546)
T ss_dssp TTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS---TTEEEEEEESSCSSSCBCCCHHHHHH
T ss_pred CCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC---CCCeEEEEECCCCCCCccCCHHHHHH
Confidence 568899998865555444444 4689999998765 4599999998774 789999999994 789875 24788
Q ss_pred HHHHH--HHcCCEEEEecccccccccccCCCc--cCCCEEEeCCCcccccCCCCCCCcceeEEEecc-cCCCC----CC-
Q 002263 640 ICKII--HDNGGQVYMDGANMNAQVGLTSPGY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFL----PS- 709 (946)
Q Consensus 640 I~~ia--~~~g~ll~vD~a~~~a~~gl~~pg~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~l----p~- 709 (946)
|.++| +++|+++++|.++.....+...... .+.++++.|++|+|+.| |.++|+++++++ +...+ |.
T Consensus 270 l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~l~~~l~~~~p~~ 345 (546)
T 2zy4_A 270 VRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGAT----GWRLGVVAAHQQNVFDLALDKLQES 345 (546)
T ss_dssp HHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCG----GGCEEEEEEESSCHHHHHHHTSCHH
T ss_pred HHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCC----CcceEEEEECCHHHHHHHHhhcchh
Confidence 89998 7899999999987421111111111 14568888999998543 677999999875 43322 10
Q ss_pred -------CccccCCC-C-----------CCCCCCCCCCCcccCccchhhHHHHH-HHHHHHHcHhhHHHHHHHHHHHHHH
Q 002263 710 -------HPVVSTGG-I-----------PAPEKSQPLGTIAAAPWGSALILPIS-YTYIAMMGSKGLTEASKIAILNANY 769 (946)
Q Consensus 710 -------~~v~~~~d-~-----------~~~~~~~~~~~i~~~~~g~~~~~~~a-~a~l~~lG~eGl~~~~~~~~~~a~~ 769 (946)
.....+.. + .+......+..+++ ..+...+..+ .+++. -+..-.++..+...++.++
T Consensus 346 ~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~--~~Q~a~a~~a~~all~-~~~~~~~~~r~~~~~r~~~ 422 (546)
T 2zy4_A 346 EKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLST--PQQVQMALFSLFALMD-EADEYKHTLKQLIRRRETT 422 (546)
T ss_dssp HHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCH--HHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCc--HHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHH
Confidence 00000000 0 00000000011111 1121111101 11211 1222233444444456666
Q ss_pred HHHHHhccCCeeeccCCCceeeeEEEecccccc--c---------CCCC-HHHHHHHHHHCCcccC-CCCCC-CCCEEEE
Q 002263 770 MAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN--T---------AGIE-PEDVAKRLMDYGFHGP-TMSWP-VPGTLMI 835 (946)
Q Consensus 770 l~~~L~~~~~v~~~~~~~~~~~e~v~~~~~~~~--~---------~g~~-~~~i~~~L~~~Gi~~~-~~~~p-~~~~lri 835 (946)
+.+.|. . .+....+.+.++ +.++++.+.. . .+.+ ...+.+.|.++||.+. ...|. ..+++||
T Consensus 423 l~~~L~-~-~~~~~~~~~~~~--l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRi 498 (546)
T 2zy4_A 423 LYRELG-M-PPLRDENAVDYY--TLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRA 498 (546)
T ss_dssp HHGGGT-S-SCCCCTTBCCSE--EEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEE
T ss_pred HHHhcC-C-CcccCCCCeeEE--EEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEE
Confidence 777775 2 221112222221 3456531100 0 0112 2346677778999853 33342 3478999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 836 EPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 836 ~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
++. ..++++++++++.|++++++..+
T Consensus 499 s~~-~~~~e~i~~~~~~l~~~l~~~~~ 524 (546)
T 2zy4_A 499 SLA-NLNEYEYAAIGRALRKMADELYA 524 (546)
T ss_dssp ESS-SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred Eec-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 997 35789999999999999887764
No 416
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.39 E-value=1.3e-11 Score=145.34 Aligned_cols=280 Identities=14% Similarity=0.120 Sum_probs=169.9
Q ss_pred hhhHHHHHHHHHHHHHHHhC--CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 94 AQGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 94 sqg~l~~l~e~q~~la~L~g--~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
++|..+......+.+.+..| .++.++.+++|+|.++..++.++... +||+|+++...|+.+...++. .|.++
T Consensus 133 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~gd~Vlv~~p~y~~~~~~~~~----~g~~~ 206 (500)
T 3tcm_A 133 SQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRN--EKDGILVPIPQYPLYSASIAL----HGGAL 206 (500)
T ss_dssp TTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCS--TTEEEEEEESCCTHHHHHHHH----TTCEE
T ss_pred CcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCC--CCCEEEEeCCCcHhHHHHHHH----cCCEE
Confidence 34444333333333443445 56678999999998887776665312 789999999999998888753 47777
Q ss_pred EEecc----------ccccc-cCC------CEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCC
Q 002263 172 VVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK 230 (946)
Q Consensus 172 ~~~~~----------~~l~~-i~~------~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~ 230 (946)
+.+++ ++|++ +.+ ++++|++.+| |.+|.+. ++++|+++|+++|++++++ +..+.....
T Consensus 207 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~D-eay~~~~~~ 285 (500)
T 3tcm_A 207 VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLAD-EVYQENIYV 285 (500)
T ss_dssp EEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE-CTTTTCBCC
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEe-cCccccccC
Confidence 77653 34444 433 7899999998 6799885 5788888899999999995 332222111
Q ss_pred ---C-CC------Ccc-----ce-EEEecc-ccc-cccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceE
Q 002263 231 ---P-PG------ELG-----AD-IVVGSA-QRF-GVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALR 289 (946)
Q Consensus 231 ---~-~~------~~G-----aD-i~v~s~-k~l-g~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~ 289 (946)
. +. ++| .+ ++++|. |.| |.| |-.+|++.+ ++++++.+.
T Consensus 286 ~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~----G~R~G~~~~~~~~~~~~~~l~----------------- 344 (500)
T 3tcm_A 286 DNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGEC----GKRGGYFEITGFSAPVREQIY----------------- 344 (500)
T ss_dssp TTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCG----GGCCEEEEEESCCTTHHHHHH-----------------
T ss_pred CCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCC----ccceEEEEEeCCCHHHHHHHH-----------------
Confidence 0 00 121 22 556675 887 332 223588877 566554430
Q ss_pred EecccccccccccccCCCccchHHHHHHHHHHHHHH---------hChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcC
Q 002263 290 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY---------HGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQG 359 (946)
Q Consensus 290 l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~---------~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~ 359 (946)
..+. .+.|++......++.+ +.- .-.+-++++.++..++++++++.|+++ | +++..
T Consensus 345 --------~~~~----~~~~~~~~~q~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g-~~~~~ 410 (500)
T 3tcm_A 345 --------KIAS----VNLCSNITGQILASLV-MNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEG-ITCNE 410 (500)
T ss_dssp --------HHHH----TTCCCCHHHHHHHHHH-HSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT-EECCC
T ss_pred --------HHHh----cccCCCHHHHHHHHHH-hcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cEEec
Confidence 0000 1233332222222211 110 001235677788889999999999998 6 88864
Q ss_pred C--CCcCeEEEecCC-------------HHH-HHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 360 L--PFFDTVKVKCAD-------------AHA-IASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 360 ~--~~~~~~~i~~~~-------------~~~-v~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
. ..+..+.+..+. ... +.+.|.++||.+... ..+.+|+++. +++++++++++.|.
T Consensus 411 ~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~ 488 (500)
T 3tcm_A 411 AEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFT 488 (500)
T ss_dssp CCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHH
T ss_pred CCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHH
Confidence 2 222112233221 112 345666789988642 1357999999 88999999999886
Q ss_pred C
Q 002263 417 G 417 (946)
Q Consensus 417 ~ 417 (946)
.
T Consensus 489 ~ 489 (500)
T 3tcm_A 489 V 489 (500)
T ss_dssp H
T ss_pred H
Confidence 3
No 417
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.38 E-value=5.4e-13 Score=152.07 Aligned_cols=241 Identities=10% Similarity=0.051 Sum_probs=145.0
Q ss_pred EEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHHHcC
Q 002263 570 VCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG 648 (946)
Q Consensus 570 ~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~~~g 648 (946)
+|+++...|..+...++..|++++.+++|.++- + .+++++|++++|| .+|.+.+ +|++.+|+++
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l-~-----------~~~~k~v~l~~p~NPtG~~~~---~l~~~~~~~~ 185 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGF-D-----------KKGPYIELVTSPNNPDGTIRE---TVVNRPDDDE 185 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCBTTEEEEEESTTC-C-----------CCSCEEEEEESSCTTTCCCCC---CCC-----CC
T ss_pred eEEEcCCCchhHHHHHHHcCCeEEEecCCHHHc-C-----------CCCCEEEEECCCCCCCchhHH---HHHHHhhcCC
Confidence 899999988888888889999999998865432 1 1578899999994 7899863 4555334445
Q ss_pred CEEEEecccccccccccC-CCccCCCEEEeCCCcccccCCCCCCCcceeEEE-ecccCCCCCCCccccCCCCCCCCCCCC
Q 002263 649 GQVYMDGANMNAQVGLTS-PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQP 726 (946)
Q Consensus 649 ~ll~vD~a~~~a~~gl~~-pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lp~~~v~~~~d~~~~~~~~~ 726 (946)
+++++|.++.. ..... ....+.++++.+++|+|+.| |.++|++++ ++++.+.+.... .
T Consensus 186 ~~ii~De~y~~--~~~~~l~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~l~~~l~~~~--------------~ 245 (391)
T 3bwn_A 186 AKVIHDFAYYW--PHYTPITRRQDHDIMLFTFSKITGHA----GSRIGWALVKDKEVAKKMVEYI--------------I 245 (391)
T ss_dssp CEEEEECTTCS--TTTSCCCCCBCCSEEEEEHHHHHSCG----GGCEEEEEECCHHHHHHHHHHH--------------H
T ss_pred CEEEEeCCCCC--CCCCccccCCCCeEEEEechhhcCCC----ccceEEEEecCHHHHHHHHHHh--------------c
Confidence 99999998752 11111 11346789999999998644 677899988 666554332100 0
Q ss_pred CCCcccCccchhhHHHHHHHHHHHHc---------HhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceee------
Q 002263 727 LGTIAAAPWGSALILPISYTYIAMMG---------SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAH------ 791 (946)
Q Consensus 727 ~~~i~~~~~g~~~~~~~a~a~l~~lG---------~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~~~~~~~~~~------ 791 (946)
....+.+..++ .++..+|.... .+.+++..+....+.+++.+.|++...+.+.++.+...+
T Consensus 246 ~~~~~~~~~~q----~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~ 321 (391)
T 3bwn_A 246 VNSIGVSKESQ----VRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSL 321 (391)
T ss_dssp HHHSSCCHHHH----HHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEE
T ss_pred ccccCCCHHHH----HHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccC
Confidence 00011111111 12223333211 344666666677888899999987422222111111100
Q ss_pred -----eEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 792 -----EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV-PGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 792 -----e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~-~~~p~-~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
-+.++++. ...+.+.|.++||.+.. ..|.. .+++||++. .++++++++++.|++++++
T Consensus 322 ~~~g~~~~~~~~~--------~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 322 ESYPAFAWLGTKE--------ETDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNVFLERLANMKLI 386 (391)
T ss_dssp CCCCSEEEEEESS--------SCCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHSCC--
T ss_pred CCcceEEEecCCc--------HHHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 13455431 13566778889998642 22322 578999997 3789999999999877543
No 418
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.38 E-value=2.4e-11 Score=140.03 Aligned_cols=279 Identities=13% Similarity=0.086 Sum_probs=170.7
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-ccc---CCCCEEEEcC-CCCHHHHHHHHHhhc-----------
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQK---GKKKTFIIAS-NCHPQTIDICITRAD----------- 165 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~---~~gd~vvv~~-~~Hps~~~~~~~~a~----------- 165 (946)
.++.+.++++++.+..++.+++|||.+++.++.+.+ +.+ .+|++||+.+ ..|+.....+.. ..
T Consensus 89 ~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~-~~~~~~~~~~~~~ 167 (429)
T 1s0a_A 89 IELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSV-CDPDNSMHSLWKG 167 (429)
T ss_dssp HHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTT-SCTTTTTGGGGTT
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhh-cCCchhhcccccC
Confidence 456678999998877889999999988887765432 111 1478999888 456554433311 00
Q ss_pred -CCCeEEEEe------------ccccccc-cC---CCEeEEEEEcC--CCceeecc----hHHHHHHHHhCCcEEEEEec
Q 002263 166 -GFDIKVVVS------------DLKDIDY-KS---GDVCGVLVQYP--GTEGEVLD----YGDFIKNAHANGVKVVMATD 222 (946)
Q Consensus 166 -~~gi~v~~~------------~~~~l~~-i~---~~t~~v~v~~p--n~~G~i~d----i~~i~~~a~~~gal~~v~a~ 222 (946)
..++.++.+ |+++|++ ++ +++++|++..+ |.+|.+.+ +++|.++|+++|+++++|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De- 246 (429)
T 1s0a_A 168 YLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADE- 246 (429)
T ss_dssp TSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEEC-
T ss_pred CCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEee-
Confidence 013343332 2344555 54 57777776544 56898877 9999999999999999953
Q ss_pred Ccc-ccCCCCC-----CCccceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccc
Q 002263 223 LLA-LTILKPP-----GELGADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 295 (946)
Q Consensus 223 ~~a-l~~l~~~-----~~~GaDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tr 295 (946)
..+ ++..... .....|+++.| |+|++ | -.+|++++++++++.+... +...+
T Consensus 247 ~~~~~g~~g~~~~~~~~~~~~d~~t~s-K~l~~-----G~~~iG~~~~~~~~~~~l~~~---------~~~~~------- 304 (429)
T 1s0a_A 247 IATGFGRTGKLFACEHAEIAPDILCLG-KALTG-----GTMTLSATLTTREVAETISNG---------EAGCF------- 304 (429)
T ss_dssp TTTTTTTTSSSSGGGGGTCCCSEEEEC-GGGGT-----SSSCCEEEEECHHHHHHHHTS---------TTSSC-------
T ss_pred hhhCCcccchHHHhhhcCCCCCEEEec-ccccC-----CCccceEEEeCHHHHHHhhcC---------CCccc-------
Confidence 322 3321111 12346877544 87752 3 3478999998877665210 00000
Q ss_pred cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcCeEEEecC-
Q 002263 296 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFDTVKVKCA- 371 (946)
Q Consensus 296 e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~~~~i~~~- 371 (946)
...+|.+.. ..+..+..+++ ..+..+ ++.++..++.++|+++|++++ ++..... ...-+.+.++
T Consensus 305 -----~~~~t~~~n-~~~~~a~~aal--~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~~~~~~ 372 (429)
T 1s0a_A 305 -----MHGPTFMGN-PLACAAANASL--AILESG---DWQQQVADIEVQLREQLAPARDAEMVADVRV-LGAIGVVETTH 372 (429)
T ss_dssp -----SCCCTTTTC-HHHHHHHHHHH--HHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTTEEEEEE-ETTEEEEEESS
T ss_pred -----ccCCCCCCC-HHHHHHHHHHH--HHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-eeEEEEEEECC
Confidence 011232221 12222333333 332222 356777788899999998752 2432211 1112334444
Q ss_pred --CHHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 372 --DAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 372 --~~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++.++.+.|.++||.++.. ++.+|++++..+|++|+++++++|+.
T Consensus 373 ~~~~~~l~~~l~~~Gi~v~~~-~~~iRis~~~~~t~e~i~~~~~~l~~ 419 (429)
T 1s0a_A 373 PVNMAALQKFFVEQGVWIRPF-GKLIYLMPPYIILPQQLQRLTAAVNR 419 (429)
T ss_dssp CBCHHHHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHCCCEEecc-CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 2778999999999998764 47899999999999999999999973
No 419
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.37 E-value=8.5e-12 Score=142.21 Aligned_cols=275 Identities=11% Similarity=0.015 Sum_probs=160.3
Q ss_pred HHHHHHHHHHhCCC------CcceEE--cccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 002263 102 LNFQTMIADLTGLP------MSNASL--LDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 173 (946)
Q Consensus 102 ~e~q~~la~L~g~~------~~~~sl--~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~ 173 (946)
.++++.+|++++.. +.++.+ +.|||.+...++.++....++||+|+++...|+.+...++. .|.+++.
T Consensus 74 ~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~----~g~~~~~ 149 (401)
T 7aat_A 74 ADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRD----AGLQLQA 149 (401)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHH----TTCEEEE
T ss_pred HHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHH----cCCeeEe
Confidence 35667777777643 567766 89999877765544321113799999999999998887653 4778877
Q ss_pred eccc--------------cccccCCCEeEEEEEcC-CCceee---cchHHHHHHHHhCCcEEEEEecCccccCCCC----
Q 002263 174 SDLK--------------DIDYKSGDVCGVLVQYP-GTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILKP---- 231 (946)
Q Consensus 174 ~~~~--------------~l~~i~~~t~~v~v~~p-n~~G~i---~di~~i~~~a~~~gal~~v~a~~~al~~l~~---- 231 (946)
++++ +++++.+++++|++.+| |.+|.+ +++++|+++|+++|++++++.-...+..-..
T Consensus 150 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 229 (401)
T 7aat_A 150 YRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDA 229 (401)
T ss_dssp EECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHT
T ss_pred eeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccH
Confidence 7652 12223467888899888 679965 4689999999999999999431122221110
Q ss_pred ------CCCccceEEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEecccccccccc
Q 002263 232 ------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 301 (946)
Q Consensus 232 ------~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr 301 (946)
.....-.++++|. |.|+.| |..+|++++ +++..+.+-.. -...++
T Consensus 230 ~~~~~~~~~~~~~i~~~S~sK~~~~~----G~RiG~l~~~~~~~~~~~~~~~~---------------------~~~~~~ 284 (401)
T 7aat_A 230 WALRHFIEQGIDVVLSQSYAKNMGLY----GERAGAFTVICRDAEEAKRVESQ---------------------LKILIR 284 (401)
T ss_dssp HHHHHHHHTTCCCEEEEECTTTSCCG----GGCEEEEEEECSSHHHHHHHHHH---------------------HHHHHH
T ss_pred HHHHHHHhcCCcEEEEecCCcccccc----cCceEEEEEEeCCHHHHHHHHHH---------------------HHHHHH
Confidence 0112345677776 777532 334788876 33322111000 000011
Q ss_pred cccCCCccchHHHHHHHHHHHHH---HhC--hhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcCeEEE-ecCC
Q 002263 302 DKATSNICTAQALLANMAAMYAV---YHG--PEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFDTVKV-KCAD 372 (946)
Q Consensus 302 e~aTsni~t~~~l~a~~aa~y~~---~~g--~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~~~~i-~~~~ 372 (946)
..++|.. . ..+..++.++. +.. .+-+++..++..++.++|.+.|+++| ++++.. +...-+.+ ..+
T Consensus 285 -~~~~~~~--~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~- 358 (401)
T 7aat_A 285 -PMYSNPP--M-NGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIT-DQIGMFCFTGLK- 358 (401)
T ss_dssp -HHHSSCC--H-HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH-HCCSSEEECCCC-
T ss_pred -hccCCCC--h-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceec-CCcceEEecCCC-
Confidence 1223332 1 11111111111 000 23467778888899999999999875 122221 11111222 222
Q ss_pred HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 373 AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 373 ~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.+.+...|.++||.+.. .+|+|++..++++ |++++++|.
T Consensus 359 ~~~~~~ll~~~gi~v~~----~~Ris~~~~~~~~-i~~~~~~l~ 397 (401)
T 7aat_A 359 PEQVERLTKEFSIYMTK----DGRISVAGVASSN-VGYLAHAIH 397 (401)
T ss_dssp HHHHHHHHHHHCEECCT----TCEEEGGGCCTTT-HHHHHHHHH
T ss_pred HHHHHHHHHhCCEeccC----CCeEEeccCChhh-HHHHHHHHH
Confidence 45554445678998853 4799998766665 999999886
No 420
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.35 E-value=1.1e-11 Score=138.86 Aligned_cols=305 Identities=16% Similarity=0.140 Sum_probs=177.9
Q ss_pred eecCCCCCCCCCcHHHHHHHHhCCccccccCCChhhhhhhHHHHHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHh
Q 002263 57 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 136 (946)
Q Consensus 57 ~~~G~g~~~~~~p~~i~~~i~~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~ 136 (946)
...|.|..+...++.+.+.+.+... . ..|.+. ....++++.+++++|.+. ..++.+||.+.+.++.++
T Consensus 16 ~~~~~~~~~~g~~p~v~~ai~~~~~-~---~~~~~~------~~~~~l~~~la~~~~~~~--~i~~~~g~~a~~~a~~~~ 83 (359)
T 3pj0_A 16 KLGGNGPRNVGVLTEALQNIDDNLE-S---DIYGNG------AVIEDFETKIAKILGKQS--AVFFPSGTMAQQIALRIW 83 (359)
T ss_dssp ESSSSSCCBHHHHHHHTTTSCTTCB-C---CBTTBS------HHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHH
T ss_pred hhcCCCccccCCCHHHHHHHHhhcc-c---CcccCC------HHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH
Confidence 4556776555556666555554222 1 122221 234567889999999876 456688887777665554
Q ss_pred ccccCCCCE--EEEcCCCCHHHHHHHHHhhcCCCeEEEEeccc-------cccccCCCEeEEEEEcC-CCc-eeecch--
Q 002263 137 NIQKGKKKT--FIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDYKSGDVCGVLVQYP-GTE-GEVLDY-- 203 (946)
Q Consensus 137 ~~~~~~gd~--vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~~-------~l~~i~~~t~~v~v~~p-n~~-G~i~di-- 203 (946)
. . ++++ |+++...|+....... .+...|++++.++.+ ++++..+++++|++++| |.+ |.+.|.
T Consensus 84 ~-~--~g~~~vvi~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v~~~~p~n~~~G~~~~~~~ 159 (359)
T 3pj0_A 84 A-D--RKENRRVAYHPLSHLEIHEQDG-LKELQQITPLLLGTANQLLTIDDIKSLREPVSSVLIELPQREIGGQLPAFEE 159 (359)
T ss_dssp H-H--HHTCCEEEECTTCHHHHSSTTH-HHHHHCCEEEECSCTTSCCCHHHHHTCSSCCSEEEEESSBGGGTSBCCCHHH
T ss_pred H-h--cCCCcEEEEeccceeeehhcch-HHHhcCceEEecCCcCCCcCHHHHHhccCCceEEEEEecccCCCcccCCHHH
Confidence 3 2 4555 6667777765532110 011248888887653 33333467999999998 555 788664
Q ss_pred -HHHHHHHHhCCcEEEEEecCccccC---C-CCCC--CccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCce
Q 002263 204 -GDFIKNAHANGVKVVMATDLLALTI---L-KPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 275 (946)
Q Consensus 204 -~~i~~~a~~~gal~~v~a~~~al~~---l-~~~~--~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~ 275 (946)
++|+++|+++|+++++|. ....+. . .++. ..++|+++.|. |+|++| ..|+++.++++++++...
T Consensus 160 l~~l~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~------~gg~~~~~~~l~~~~~~~- 231 (359)
T 3pj0_A 160 LEKISEYCHEQGISLHLDG-ARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGI------AGAILAGNDDFVQEAKIW- 231 (359)
T ss_dssp HHHHHHHHHHHTCEEEEEE-TTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCS------SCEEEEECHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCEEEEEC-cchhcchhhhCCCHHHhhccCCEEEEeccccCCCc------ceEEEECCHHHHHHHHHH-
Confidence 555999999999999953 111111 1 1111 24689998887 767544 237888888877665100
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCE
Q 002263 276 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 355 (946)
Q Consensus 276 ~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~ 355 (946)
+ ....++.+.. ..+ +..+...+.. .++. .++..++++++++.|+++.++
T Consensus 232 -------------------~----~~~~~~~~~~--~~~-~~a~~~~l~~----~~~~-~~~~~~~~~~l~~~L~~~~g~ 280 (359)
T 3pj0_A 232 -------------------K----RRYGGDLISL--YPY-ILSADYYFEK----RIGK-MAEYFEAAKGLAERFNSCSGV 280 (359)
T ss_dssp -------------------H----HHTTCCCSCC--HHH-HHHHHHHHHH----HGGG-HHHHHHHHHHHHHHHHTSTTE
T ss_pred -------------------H----HHhCCCcchh--HHH-HHHHHHHHHH----HHHH-hHHHHHHHHHHHHHHhhCCCc
Confidence 0 0000111111 111 1111111111 1222 334577889999999998339
Q ss_pred EEc-CCCCcCeEEEecCC-----HHHHHHHHHHcCCeeeee----c--CCeEEEEecc---CCCHHHHHHHHHHHh
Q 002263 356 EVQ-GLPFFDTVKVKCAD-----AHAIASAAYKIEMNLRVV----D--SNTVTASFDE---TTTLEDVDKLFIVFA 416 (946)
Q Consensus 356 ~~~-~~~~~~~~~i~~~~-----~~~v~~~L~~~GI~~~~~----~--~~~lris~~~---~~t~edid~ll~~l~ 416 (946)
++. .++..+-+.+.++. ..++.+.|.++||.++.. . .+.+|+++.. ..+.+++++.++.|.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~ 356 (359)
T 3pj0_A 281 KTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLE 356 (359)
T ss_dssp EEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHH
T ss_pred eeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHH
Confidence 885 33333334444432 568899999999987542 1 2468888864 357888888888775
No 421
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.34 E-value=3.2e-11 Score=137.02 Aligned_cols=272 Identities=11% Similarity=0.025 Sum_probs=162.3
Q ss_pred HHHHHHHHHhCC------CCc--ceEEcccHHHHHHHHH--HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 103 NFQTMIADLTGL------PMS--NASLLDEGTAAAEAMA--MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 103 e~q~~la~L~g~------~~~--~~sl~~~~Ta~~ea~~--la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
++++.++++++. ++. ++.+++|+|.+++.++ +++ .. +||+|+++...|+.+...++. .|.+++
T Consensus 74 ~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~-~~--~gd~vl~~~p~~~~~~~~~~~----~g~~~~ 146 (397)
T 3fsl_A 74 CYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKR-YF--PESGVWVSDPTWENHVAIFAG----AGFEVS 146 (397)
T ss_dssp HHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHH-HC--TTCCEEEESSCCHHHHHHHHH----TTCCEE
T ss_pred HHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHh-cC--CCCeEEEeCCCchhHHHHHHH----cCCceE
Confidence 455677777654 445 7888999998887763 222 23 789999999999998877653 577777
Q ss_pred Eecc----------ccccc-cC---CCEeEEEEEcC-CCceee---cchHHHHHHHHhCCcEEEEEecCccccCCC----
Q 002263 173 VSDL----------KDIDY-KS---GDVCGVLVQYP-GTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK---- 230 (946)
Q Consensus 173 ~~~~----------~~l~~-i~---~~t~~v~v~~p-n~~G~i---~di~~i~~~a~~~gal~~v~a~~~al~~l~---- 230 (946)
.++. +++++ +. ++++++++.+| |.+|.+ +++++|+++|+++|++++++. ..+.....
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~~~~~ 225 (397)
T 3fsl_A 147 TYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDI-AYQGFGAGMEED 225 (397)
T ss_dssp EECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEE-SCTTSSSCTTGG
T ss_pred EEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEec-CchhhccCcccc
Confidence 7765 23444 54 67888888888 679988 467799999999999999953 22221111
Q ss_pred --C----CCCccceEEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEeccccccccc
Q 002263 231 --P----PGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 300 (946)
Q Consensus 231 --~----~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~ir 300 (946)
+ +...+-+++++|. |.|+.| |-.+|++.+ ++++++.+-.. + .+..
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~riG~~~~~~~~~~~~~~~~~~-----------------~---~~~~- 280 (397)
T 3fsl_A 226 AYAIRAIASAGLPALVSNSFSKIFSLY----GERVGGLSVMCEDAEAAGRVLGQ-----------------L---KATV- 280 (397)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCG----GGCCEEEEEECSSHHHHHHHHHH-----------------H---HHHH-
T ss_pred cHHHHHHHhcCCCEEEEecccccccCc----CCCeeEEEEecCCHHHHHHHHHH-----------------H---HHHH-
Confidence 0 0123446777776 777532 234688865 22333222000 0 0000
Q ss_pred ccccCCCccchHHHHHHHHHHH-HHH--hChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcCeEEE-ecCCH
Q 002263 301 RDKATSNICTAQALLANMAAMY-AVY--HGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFDTVKV-KCADA 373 (946)
Q Consensus 301 re~aTsni~t~~~l~a~~aa~y-~~~--~g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~~~~i-~~~~~ 373 (946)
| ..+++.. ..+..+..+.+- ..+ ...+.++++.++..++.+++.+.|++++ ++++.... ..-+.+ ..+ .
T Consensus 281 ~-~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 356 (397)
T 3fsl_A 281 R-RNYSSPP-NFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQ-RGMFSYTGLS-A 356 (397)
T ss_dssp H-TTTSSCC-SHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHC-CSSEEECCCC-H
T ss_pred H-hccCCCC-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCC-ceEEEecCCC-H
Confidence 0 1111111 111111111110 000 0135577888889999999999998862 25443211 111222 222 5
Q ss_pred HHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 374 HAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 374 ~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..+.+.|.++||.+.. .+ |+|+... ++++|++++++|.
T Consensus 357 ~~~~~~l~~~gi~v~~--g~--Ris~~~~-~~~~i~~~~~~l~ 394 (397)
T 3fsl_A 357 AQVDRLREEFGVYLIA--SG--RMCVAGL-NTANVQRVAKAFA 394 (397)
T ss_dssp HHHHHHHHTTCEECCT--TC--EEEGGGC-CTTTHHHHHHHHH
T ss_pred HHHHHHHHhCCEEECC--CC--eEEEEec-CHhhHHHHHHHHH
Confidence 5677778888999874 22 8998754 4577999999885
No 422
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.34 E-value=4.8e-11 Score=137.25 Aligned_cols=326 Identities=13% Similarity=0.109 Sum_probs=191.8
Q ss_pred CHHHHHHHHHHHHhcCCcceeecCCCCCC---CCCcHHHHHHHHhC-----CccccccCCChhhhhhhHHHHHHHHHHHH
Q 002263 37 TESQMIEHMQKLASMNKVYKSFIGMGYYN---THVPPVILRNIMEN-----PAWYTQYTPYQAEIAQGRLESLLNFQTMI 108 (946)
Q Consensus 37 se~e~~~~~~~l~~~n~~~~~~~G~g~~~---~~~p~~i~~~i~~~-----~~~~t~~~pyq~e~sqg~l~~l~e~q~~l 108 (946)
+...+.+.+.++..++.. .+ ++.|..+ ...|+.+.+.+.+. +.....|++. +| ..++++.+
T Consensus 17 ~~~~~~~~~~~l~~~~~~-i~-l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~-----~G----~~~lr~~i 85 (422)
T 3d6k_A 17 VREEVTAKYAELKAKNLS-LD-LTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGL-----LG----IADIRELW 85 (422)
T ss_dssp -CHHHHHHHHHHHHTTCC-EE-CCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCS-----SC----CHHHHHHH
T ss_pred hHHHHHHHHHHHhccCCe-Ee-CCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCC-----CC----CHHHHHHH
Confidence 344667777777765543 22 3555444 33554444333322 1112344332 22 23567899
Q ss_pred HHHhCCCCcceEEcccHHHHH--HHHHHHhcccc---C-------CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 109 ADLTGLPMSNASLLDEGTAAA--EAMAMCNNIQK---G-------KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 109 a~L~g~~~~~~sl~~~~Ta~~--ea~~la~~~~~---~-------~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
|+++|.++.++.+++|++.++ ..++.++. .. + .+++|+++.-.|+.+...++. .|.+++.+++
T Consensus 86 a~~~~~~~~~i~~t~G~~~al~l~~~~~~l~-~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~ 160 (422)
T 3d6k_A 86 AEALGLPADLVVAQDGSSLNIMFDLISWSYT-WGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEH----FGFEMINVPM 160 (422)
T ss_dssp HHHHTCCGGGEEECSSCHHHHHHHHHHHHHH-HCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHH----HTCEEEEEEE
T ss_pred HHHhCCChhHEEEecchHHHHHHHHHHHHhc-CcccccccccccCCCCEEEEeCCccHHHHHHHHH----cCCEEEecCC
Confidence 999999988999999988665 33333332 21 0 134799999999998887654 3777776654
Q ss_pred -------ccccc-cCC-CEeEEE-EEcC-CCceeecchH---HHHHHHH-hCCcEEEEEecCcc---ccCCC----CC--
Q 002263 177 -------KDIDY-KSG-DVCGVL-VQYP-GTEGEVLDYG---DFIKNAH-ANGVKVVMATDLLA---LTILK----PP-- 232 (946)
Q Consensus 177 -------~~l~~-i~~-~t~~v~-v~~p-n~~G~i~di~---~i~~~a~-~~gal~~v~a~~~a---l~~l~----~~-- 232 (946)
+++++ +.+ ++++|+ +.+| |.+|.+.+.+ +|+++|+ ++|++++++ +..+ +..-. +.
T Consensus 161 ~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~D-e~y~~~~~~~~~~~~~~~~~ 239 (422)
T 3d6k_A 161 TDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWD-NAYALHTLSDEFPIVHNVIE 239 (422)
T ss_dssp ETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEE-CTTTTCBSSSCCCCCCCHHH
T ss_pred CCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEE-CCccccccCCCCCCCcChhh
Confidence 44555 654 789888 4567 6799998765 8888888 899999994 2333 21100 11
Q ss_pred -----CCccceEEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 233 -----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 233 -----~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
+..+.+++++|. |. +.| |-.+|++++++++++.+... ++ ..+
T Consensus 240 ~~~~~~~~~~~i~~~S~SK~-~~~----GlriG~~~~~~~l~~~l~~~-------------------------~~-~~~- 287 (422)
T 3d6k_A 240 FAQAAGNPNRFWFMSSTSKI-THA----GSGVSFFASSKENIEWYASH-------------------------AN-VRG- 287 (422)
T ss_dssp HHHHTTCTTCEEEEEESTTT-SCT----TSSCEEEECCHHHHHHHHHH-------------------------HH-HHC-
T ss_pred HhhccCCCCcEEEEcChhhh-cCc----ccceEEEEeCHHHHHHHHHH-------------------------HH-hhc-
Confidence 234567888887 75 433 33479999988877655100 00 001
Q ss_pred CccchHHHHHHHHHHHHHHhCh-----hhHHHHHHHHHHHHHHHHHHHh----cCCCEEEcCCCCcCeEEEecCC--HHH
Q 002263 307 NICTAQALLANMAAMYAVYHGP-----EGLKTIAQRVHGLAGTFALGLK----KLGTVEVQGLPFFDTVKVKCAD--AHA 375 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~-----~Gl~~i~~~~~~~a~~l~~~L~----~~g~~~~~~~~~~~~~~i~~~~--~~~ 375 (946)
.+++.. +..++. .++.. +-++++.++..+..+++.+.|. ++|++++.......-+.+.++. ..+
T Consensus 288 -~~~~~~--~q~a~~--~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 362 (422)
T 3d6k_A 288 -IGPNKL--NQLAHA--QFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASR 362 (422)
T ss_dssp -SCCCHH--HHHHHH--HHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCHHH
T ss_pred -CCCCHH--HHHHHH--HHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCHHH
Confidence 111111 111221 22222 2244455555555555555554 3443665432111123344443 677
Q ss_pred HHHHHHHcCCeeee----e------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 376 IASAAYKIEMNLRV----V------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 376 v~~~L~~~GI~~~~----~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.+.|.++||.+.. . ..+.+|+|++. +++++++++++.|+.
T Consensus 363 ~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~ 413 (422)
T 3d6k_A 363 VVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFAT 413 (422)
T ss_dssp HHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHH
Confidence 88899999998865 1 13689999998 899999999999974
No 423
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.34 E-value=1.1e-11 Score=141.94 Aligned_cols=272 Identities=13% Similarity=0.024 Sum_probs=165.3
Q ss_pred HHHHHHHHHHh-CC-----CCcceEE--cccHHHHHHHHHHHhc-cccCCC-----CEEEEcCCCCHHHHHHHHHhhcCC
Q 002263 102 LNFQTMIADLT-GL-----PMSNASL--LDEGTAAAEAMAMCNN-IQKGKK-----KTFIIASNCHPQTIDICITRADGF 167 (946)
Q Consensus 102 ~e~q~~la~L~-g~-----~~~~~sl--~~~~Ta~~ea~~la~~-~~~~~g-----d~vvv~~~~Hps~~~~~~~~a~~~ 167 (946)
.++++.+++++ +. ++.++.+ +.|||.+++.++.... +. +| |+|+++...|+.+...++. .
T Consensus 77 ~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~--~g~~~~~d~Vl~~~p~y~~~~~~~~~----~ 150 (412)
T 1ajs_A 77 AEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY--NGTNNKDTPVYVSSPTWENHNGVFTT----A 150 (412)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHS--SSSSCCCSCEEEEESCCTHHHHHHHH----T
T ss_pred HHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhC--cCcCCCCCeEEEcCCCcHHHHHHHHH----c
Confidence 45677888888 54 5567888 9999988887743222 23 67 9999999999988777653 4
Q ss_pred CeE-EEEecc----------ccccc-cC---CCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccC
Q 002263 168 DIK-VVVSDL----------KDIDY-KS---GDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTI 228 (946)
Q Consensus 168 gi~-v~~~~~----------~~l~~-i~---~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~ 228 (946)
|.+ ++.++. +++++ ++ ++++++++.+| |.+|.+. ++++|+++|+++|+++++|.-...++.
T Consensus 151 g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~ 230 (412)
T 1ajs_A 151 GFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFAS 230 (412)
T ss_dssp TCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTT
T ss_pred CCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccC
Confidence 666 665544 33444 43 36778888888 6799884 577999999999999999531122221
Q ss_pred CC------CCCCc---c-ceEEEecc-ccccccCCCCCCc--eEEEEE---chhhhhcCCCceEeEeecCCCCcceEEec
Q 002263 229 LK------PPGEL---G-ADIVVGSA-QRFGVPMGYGGPH--AAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAM 292 (946)
Q Consensus 229 l~------~~~~~---G-aDi~v~s~-k~lg~P~~~GGP~--~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l 292 (946)
-. +...+ + -++++.|. |.|+ +|| +|++++ ++++++.+- + . +
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~------~~G~riG~~~~~~~~~~~~~~~~--------~----~-----~ 287 (412)
T 1ajs_A 231 GNLEKDAWAIRYFVSEGFELFCAQSFSKNFG------LYNERVGNLTVVAKEPDSILRVL--------S----Q-----M 287 (412)
T ss_dssp SCHHHHTHHHHHHHHTTCCEEEEEECTTTSC------CGGGCEEEEEEECSSHHHHHHHH--------H----H-----H
T ss_pred CcccccchHHHHHhccCCcEEEEEecccccC------CCCcceEEEEEecCCHHHHHHHH--------H----H-----H
Confidence 10 00111 1 23777776 7664 234 799998 666433220 0 0 0
Q ss_pred ccccccccccccCCCccchHHHHHHHHHHHHHHhC-----hhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcC
Q 002263 293 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHG-----PEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFD 364 (946)
Q Consensus 293 ~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g-----~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~ 364 (946)
....+ .+.+..+.....+..+++ .... .+.++++.++..++.+++.+.|+++| ++++.... ..
T Consensus 288 ----~~~~~--~~~~~~~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~ 358 (412)
T 1ajs_A 288 ----QKIVR--VTWSNPPAQGARIVARTL--SDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQ-IG 358 (412)
T ss_dssp ----HHHHH--TTTSSCCSHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHC-CS
T ss_pred ----HHHHh--cccCCCChHHHHHHHHHH--cCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCC-Cc
Confidence 00001 111111112222222222 1110 24678888999999999999999875 24443211 11
Q ss_pred eEEE-ecCCHHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 365 TVKV-KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 365 ~~~i-~~~~~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
-+.+ ..+ ...+.+.|.++||.+.. .+|+|++. .+++|+++++++|+.
T Consensus 359 ~~~~~~~~-~~~~~~~l~~~gv~v~~----~~Ris~~~-~~~~~i~~~~~~l~~ 406 (412)
T 1ajs_A 359 MFSFTGLN-PKQVEYLINQKHIYLLP----SGRINMCG-LTTKNLDYVATSIHE 406 (412)
T ss_dssp SEEECCCC-HHHHHHHHHTTCEECCT----TSEEEGGG-CCTTTHHHHHHHHHH
T ss_pred eEEEeCCC-HHHHHHHHHhCCEEecC----CcEEEeee-CCHHHHHHHHHHHHH
Confidence 1222 222 44555666788998874 37999984 489999999999863
No 424
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.34 E-value=2.6e-11 Score=140.72 Aligned_cols=278 Identities=10% Similarity=0.059 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHhC-CCCcceEEcccHHHHHHHHHHHhc-ccc---------C-CCCEEEEcCCC-CHHHHHHHH------
Q 002263 101 LLNFQTMIADLTG-LPMSNASLLDEGTAAAEAMAMCNN-IQK---------G-KKKTFIIASNC-HPQTIDICI------ 161 (946)
Q Consensus 101 l~e~q~~la~L~g-~~~~~~sl~~~~Ta~~ea~~la~~-~~~---------~-~gd~vvv~~~~-Hps~~~~~~------ 161 (946)
..++.+.++++++ .+..++.++++||.++++++.+.+ +.. + +|++||+.+.. |+.+...+.
T Consensus 103 ~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~ 182 (449)
T 2cjg_A 103 MARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKP 182 (449)
T ss_dssp HHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCch
Confidence 4456678999987 455678899999988887764322 221 1 27899988854 443332111
Q ss_pred --H-hhcCCCeEEEEecccc------------------ccc-c---CCCEeEEEEEcC-CCceeecc----hHHHHHHHH
Q 002263 162 --T-RADGFDIKVVVSDLKD------------------IDY-K---SGDVCGVLVQYP-GTEGEVLD----YGDFIKNAH 211 (946)
Q Consensus 162 --~-~a~~~gi~v~~~~~~~------------------l~~-i---~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~ 211 (946)
. ...+..-.+..++..+ |++ + ++++++|++... |.+|.+.+ +++|.++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~ 262 (449)
T 2cjg_A 183 TITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCD 262 (449)
T ss_dssp HHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHH
T ss_pred hhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHH
Confidence 0 0011112455555433 666 6 368888877654 67898777 999999999
Q ss_pred hCCcEEEEEecCcc-ccCCCCC---C--CccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCC
Q 002263 212 ANGVKVVMATDLLA-LTILKPP---G--ELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGK 285 (946)
Q Consensus 212 ~~gal~~v~a~~~a-l~~l~~~---~--~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~ 285 (946)
++|+++++| +..+ ++..... . ....|+++. +|+| | +|++++++++.+.+.+...+
T Consensus 263 ~~g~lli~D-Ev~~g~g~~g~~~~~~~~~~~~di~t~-sK~l--~-------iG~~~~~~~~~~~l~~~~~~-------- 323 (449)
T 2cjg_A 263 EFDALLIFD-EVQTGCGLTGTAWAYQQLDVAPDIVAF-GKKT--Q-------VCGVMAGRRVDEVADNVFAV-------- 323 (449)
T ss_dssp HTTCEEEEE-CTTTTTTTTSSSSTHHHHTCCCSEEEE-CGGG--S-------SEEEEECGGGGGSTTCTTTS--------
T ss_pred HCCcEEEEe-ccccCCCccCcceeecccCCCceEEEe-cCcc--c-------EEEEEECHHHhhhhhhcccC--------
Confidence 999999994 2333 3321111 1 134687654 3877 4 46788888887765321100
Q ss_pred cceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CC-EEEcCC
Q 002263 286 PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GT-VEVQGL 360 (946)
Q Consensus 286 ~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~-~~~~~~ 360 (946)
+ .+...|.+. ++.+..+..+++ ..+.. +++.++..++.++++++|+++ +. +....
T Consensus 324 ~-------------~~~~~t~~~-n~~~~~aa~aal--~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~- 383 (449)
T 2cjg_A 324 P-------------SRLNSTWGG-NLTDMVRARRIL--EVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDPR- 383 (449)
T ss_dssp T-------------TSSCCSSSS-CHHHHHHHHHHH--HHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEE-
T ss_pred C-------------cccccCCCC-CHHHHHHHHHHH--HHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEe-
Confidence 0 001122211 112222333333 22222 245677788888999988764 21 21111
Q ss_pred CCcCeEEEecCC---HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 361 PFFDTVKVKCAD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 361 ~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+...-+.+.+++ ..++.++|.++||.+.....+.+|++++..+|++|+++++++|..
T Consensus 384 ~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~ 443 (449)
T 2cjg_A 384 GRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRS 443 (449)
T ss_dssp EETTEEEEECSSHHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred eccEEEEEEECChHHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 111224455554 568999999999998776568999999999999999999999963
No 425
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.33 E-value=3e-11 Score=140.01 Aligned_cols=288 Identities=16% Similarity=0.145 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cc--c--CCCCEEEEcC-CCCHHHHHHHHHhh-----cC--
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQ--K--GKKKTFIIAS-NCHPQTIDICITRA-----DG-- 166 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~--~--~~gd~vvv~~-~~Hps~~~~~~~~a-----~~-- 166 (946)
...++++.++++++.+..++.++++||.++++++.+++ +. + .++++||+.+ ..|..+...+.... +.
T Consensus 94 ~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~ 173 (449)
T 3a8u_X 94 LSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFG 173 (449)
T ss_dssp HHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTC
T ss_pred HHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccC
Confidence 34567789999998777789999999988887765433 11 1 1468888755 55655544433210 01
Q ss_pred ---CCeEEEEec-------------------cccccc-cC----CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCC
Q 002263 167 ---FDIKVVVSD-------------------LKDIDY-KS----GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANG 214 (946)
Q Consensus 167 ---~gi~v~~~~-------------------~~~l~~-i~----~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~g 214 (946)
.++.++.++ +++|++ +. +++++|++... +.+|.+.+ +++|.++|+++|
T Consensus 174 ~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~ 253 (449)
T 3a8u_X 174 QPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHN 253 (449)
T ss_dssp CCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHT
T ss_pred CCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhC
Confidence 244444322 334555 54 46777776533 45899888 999999999999
Q ss_pred cEEEEEecCc-cccCCCCC---CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcce
Q 002263 215 VKVVMATDLL-ALTILKPP---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPAL 288 (946)
Q Consensus 215 al~~v~a~~~-al~~l~~~---~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~ 288 (946)
+++++| +.. +++..... ..+| .|+++. +|+|++ |+--+|++++++++.+.+... +.+
T Consensus 254 ~~li~D-ev~~~~g~~g~~~~~~~~~~~~di~s~-sK~l~~----G~~~~G~~~~~~~~~~~l~~~---------~~~-- 316 (449)
T 3a8u_X 254 ILLVFD-EVITGFGRTGSMFGADSFGVTPDLMCI-AKQVTN----GAIPMGAVIASTEIYQTFMNQ---------PTP-- 316 (449)
T ss_dssp CEEEEE-CTTTTTTTTSSSSHHHHHTCCCSEEEE-CGGGGT----TSSCCEEEEEEHHHHHHHHTC---------SSC--
T ss_pred CEEEEe-ccccCccccCcchhhhhcCCCCCEEEE-cccccC----CCCceEEEEECHHHHHHhhcc---------Ccc--
Confidence 999995 333 34422111 1223 587743 388852 212267788888877655210 000
Q ss_pred EEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CCCcCeE
Q 002263 289 RVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTV 366 (946)
Q Consensus 289 ~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~--~~~~~~~ 366 (946)
..+... ....|.+.. +.+..+..+++ ..+..+ ++.++..++.++++++|++++.+.++. ......+
T Consensus 317 -----~~~~~~-~~~~t~~~~-~~~~aa~~aal--~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~ 384 (449)
T 3a8u_X 317 -----EYAVEF-PHGYTYSAH-PVACAAGLAAL--CLLQKE---NLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAG 384 (449)
T ss_dssp -----TTSCSS-CCCCTTTTC-HHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEE
T ss_pred -----cccccc-cccCCCccc-HHHHHHHHHHH--HHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEE
Confidence 000000 011222211 11222222332 332222 356777888899999998753121110 0111123
Q ss_pred EEecCC---H-----HHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 367 KVKCAD---A-----HAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 367 ~i~~~~---~-----~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.++. . .++.+.|.++||.++... +.+|++++..+|++|+++++++|..
T Consensus 385 ~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRis~~~~~t~~~i~~~l~~l~~ 442 (449)
T 3a8u_X 385 AIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-DTLQFGPTFNSKPQDLDRLFDAVGE 442 (449)
T ss_dssp EEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEecCcccccccHHHHHHHHHHCCcEEecCC-CEEEEECCCcCCHHHHHHHHHHHHH
Confidence 344432 1 269999999999987653 8899999999999999999999963
No 426
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.32 E-value=6.3e-12 Score=142.84 Aligned_cols=271 Identities=10% Similarity=0.066 Sum_probs=164.4
Q ss_pred HHHHHHHHHh-CC--CCcceEE--cccHHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc
Q 002263 103 NFQTMIADLT-GL--PMSNASL--LDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 176 (946)
Q Consensus 103 e~q~~la~L~-g~--~~~~~sl--~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~ 176 (946)
++++.+|+++ |. ++.++.+ +.|||.+.++++.++. +. +||+|+++...|+.+...++. .|.+++.++.
T Consensus 73 ~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~ 146 (394)
T 2ay1_A 73 EFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMAN--PDLRVFVSDPTWPNHVSIMNF----MGLPVQTYRY 146 (394)
T ss_dssp HHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHC--TTCCEEEEESCCHHHHHHHHH----HTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHH----cCCceEEEec
Confidence 4567777776 55 5677888 8999988887765443 22 789999999999998877654 3666666554
Q ss_pred ----------ccccc-cCC---CEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCC------C-
Q 002263 177 ----------KDIDY-KSG---DVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK------P- 231 (946)
Q Consensus 177 ----------~~l~~-i~~---~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~------~- 231 (946)
+++++ +++ +++++++.+| |.+|.+. ++++|+++|+++|+++++|. ..+..... +
T Consensus 147 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De-~~~~~~~~~~~~~~~~ 225 (394)
T 2ay1_A 147 FDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDL-AYQGFGDGLEEDAAGT 225 (394)
T ss_dssp EETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE-CCTTSSSCHHHHHHHH
T ss_pred ccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEec-CccccccCcccchHHH
Confidence 33444 432 3667777887 6799886 46789999999999999943 22211110 0
Q ss_pred --CCCccce-EEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEeccccccccccc-c
Q 002263 232 --PGELGAD-IVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD-K 303 (946)
Q Consensus 232 --~~~~GaD-i~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre-~ 303 (946)
....+.| ++++|. |.|+.| |-.+|++++ ++++++.+-.. + .. ..+. .
T Consensus 226 ~~~~~~~~~~i~~~s~sK~~~~~----G~riG~~~~~~~~~~~~~~l~~~-------------~-------~~-~~~~~~ 280 (394)
T 2ay1_A 226 RLIASRIPEVLIAASCSKNFGIY----RERTGCLLALCADAATRELAQGA-------------M-------AF-LNRQTY 280 (394)
T ss_dssp HHHHHHCSSEEEEEECTTTTTCG----GGCEEEEEEECSSHHHHHHHHHH-------------H-------HH-HHHTTT
T ss_pred HHHhhcCCCEEEEEeccCCCcCc----CCccceEEEEeCCHHHHHHHHHH-------------H-------HH-HHhhhc
Confidence 0122333 567775 777432 334699988 56554332000 0 00 0010 0
Q ss_pred cCCCccchHHHHHHHHHHHHHHh-----ChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcCeEEEecCCHHH
Q 002263 304 ATSNICTAQALLANMAAMYAVYH-----GPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFDTVKVKCADAHA 375 (946)
Q Consensus 304 aTsni~t~~~l~a~~aa~y~~~~-----g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~~~~i~~~~~~~ 375 (946)
.+.|. ....+..+++ ... -.+.++++.++..++.+++.+.|+++| ++++.......-+.+..+ ...
T Consensus 281 ~~~~~---~~~~a~~~~l--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-~~~ 354 (394)
T 2ay1_A 281 SFPPF---HGAKIVSTVL--TTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT-PEQ 354 (394)
T ss_dssp SSCCC---HHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC-HHH
T ss_pred CCCCh---HHHHHHHHHh--cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC-HHH
Confidence 11121 2222222222 111 124678888888999999999998764 243321110111222222 456
Q ss_pred HHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 376 IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 376 v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.+.|.++||.+.. .+|+|++ .++++|+++++++|.
T Consensus 355 ~~~~l~~~gi~v~~----~~Ris~~-~~~~~~i~~~~~~l~ 390 (394)
T 2ay1_A 355 VKRIKEEFGIYMVG----DSRINIA-GLNDNTIPILARAII 390 (394)
T ss_dssp HHHHHHHHCEECCT----TCEEEGG-GCCTTTHHHHHHHHH
T ss_pred HHHHHHhCCEEecC----CCeEEee-cCCHhhHHHHHHHHH
Confidence 77778789998864 3799988 579999999999986
No 427
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.31 E-value=1e-10 Score=135.06 Aligned_cols=277 Identities=14% Similarity=0.115 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHhCCCC-cceEEcccHHHHHHHHHHHhc-cccCCCCEEEE-cCCCCHHHHHHHHHhhc----------
Q 002263 99 ESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNN-IQKGKKKTFII-ASNCHPQTIDICITRAD---------- 165 (946)
Q Consensus 99 ~~l~e~q~~la~L~g~~~-~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv-~~~~Hps~~~~~~~~a~---------- 165 (946)
+...++++.++++++... .++.++++||.++++++.+.+ .. ++++||+ +...|..+...+.....
T Consensus 86 ~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 163 (439)
T 3dxv_A 86 APAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKAT--GRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKAD 163 (439)
T ss_dssp HHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHH--SCCEEEEETTCCCCSSHHHHCC-------------
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHh--CCCEEEEECCCCCCCcHHHHhhcCCCchhhccccC
Confidence 345567789999997655 578899999988887765432 22 4556665 55666665544321000
Q ss_pred CCCeEEEEec-------------cccccc-c----CCCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEec
Q 002263 166 GFDIKVVVSD-------------LKDIDY-K----SGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATD 222 (946)
Q Consensus 166 ~~gi~v~~~~-------------~~~l~~-i----~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~ 222 (946)
+....+..++ +++|++ + .+++++|++..+ +..|.+.+ +++|.++|+++|+++++| +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D-E 242 (439)
T 3dxv_A 164 GLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCD-E 242 (439)
T ss_dssp CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEE-C
T ss_pred CCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-c
Confidence 0000112222 345655 6 567888877665 56888888 999999999999999994 3
Q ss_pred Ccc-ccCCCCC---CC--ccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccc
Q 002263 223 LLA-LTILKPP---GE--LGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 296 (946)
Q Consensus 223 ~~a-l~~l~~~---~~--~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre 296 (946)
.++ ++..... .. ...|++ .-+|.|+ ||-.+|++++++++++.+...
T Consensus 243 ~~~g~g~~g~~~~~~~~~~~~di~-s~sK~~~-----~G~riG~~~~~~~~~~~~~~~---------------------- 294 (439)
T 3dxv_A 243 VKVGLARSGRLHCFEHEGFVPDIL-VLGKGLG-----GGLPLSAVIAPAEILDCASAF---------------------- 294 (439)
T ss_dssp TTTCTTTTSSSSGGGGTTCCCSEE-EECGGGG-----TTSCCEEEEEEHHHHTSCSSS----------------------
T ss_pred cccCCCcCchhhHHHhcCCCCCEE-EEcchhc-----CCcceEEEEECHHHHhhhcCC----------------------
Confidence 332 3211111 12 235776 2348886 233468999998887766211
Q ss_pred ccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEc-CCCCcCeEEEec-
Q 002263 297 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQ-GLPFFDTVKVKC- 370 (946)
Q Consensus 297 ~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~-~~~~~~~~~i~~- 370 (946)
....|. .++.+..+..+++ ..+.. +++.+++.++.+++++.|+++ +.+... +...+-.+.+..
T Consensus 295 ----~~~~t~--~~~~~~~aa~aal--~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 363 (439)
T 3dxv_A 295 ----AMQTLH--GNPISAAAGLAVL--ETIDR---DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCD 363 (439)
T ss_dssp ----SCCTTT--TCHHHHHHHHHHH--HHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEE
T ss_pred ----CcCCCc--ccHHHHHHHHHHH--HHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecC
Confidence 001111 1112222223332 22222 334556666777777777653 212222 111121222210
Q ss_pred -----CC---HHHHHHHHHHcCCeeeeec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 371 -----AD---AHAIASAAYKIEMNLRVVD--SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 -----~~---~~~v~~~L~~~GI~~~~~~--~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+. +.++.+.|.++||.+.... ++.+|++++..+|++|+++++++|..
T Consensus 364 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 420 (439)
T 3dxv_A 364 RQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDR 420 (439)
T ss_dssp TTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 22 5788999999999987654 38899999999999999999999974
No 428
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.30 E-value=2.3e-11 Score=139.06 Aligned_cols=299 Identities=12% Similarity=0.069 Sum_probs=169.2
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--cc--c-ccCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCHHHHHHcC
Q 002263 515 AQGYQEMFNNLGEWLCTITGFD--SF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 589 (946)
Q Consensus 515 ~qG~~~~~~el~~~la~l~G~~--~~--~-l~~~sGa~ge~a~l~a~r~y~~~~G~~~~~~Ili~~saHg~~~~~a~~~G 589 (946)
.+|..++...+.+++.+..+.. .. . +++.+|+++.. ++++.+. . ..+ |+|+++++.+..+...++.+|
T Consensus 71 ~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~---~~~~~l~-~--~~~-d~Vlv~~P~y~~~~~~~~~~g 143 (405)
T 3k7y_A 71 GNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIF---VLLEFLK-M--LNV-ETLYVTNPPYINHVNMIESRG 143 (405)
T ss_dssp TSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHH---HHHHHHH-T--TTC-CEEEEESSCCHHHHHHHHTTT
T ss_pred CCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHH---HHHHHHH-h--cCC-CEEEEeCCCCHhHHHHHHHcC
Confidence 4687766666666664443322 11 1 34444444433 2333321 1 015 899999997777777788999
Q ss_pred CEEEEEcC-CC-CCCCCHHHHHHHHHhcCCCeEEEEEeCC--Ccccccc--cCHHHHHHHHHHcCCEEEEeccccc-ccc
Q 002263 590 MKIVSVGT-DA-KGNINIEELRKAAEANRDNLSTLMVTYP--STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQV 662 (946)
Q Consensus 590 ~~vv~v~~-~~-~g~~D~e~L~~~i~~~~~~t~~vvvt~P--n~~G~~~--~~i~~I~~ia~~~g~ll~vD~a~~~-a~~ 662 (946)
.+++.+|+ ++ ++.+|+++|++++++. ++++++++++| |.+|.+- +.+++|+++|++||++++.|.++.. ...
T Consensus 144 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~ 222 (405)
T 3k7y_A 144 FNLKYINFFDYNLIDINYDLFLNDLRNI-PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHT 222 (405)
T ss_dssp CEEEEECCEETTTTEECHHHHHHHHHHS-CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSS
T ss_pred CeEEEEeccccccCCcCHHHHHHHHHhC-CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCC
Confidence 99999998 44 4789999999999742 35667777664 6889885 3588999999999999999987531 111
Q ss_pred cccC---C----CccCCC-EEEeCCCcccccCCCCCCCcceeEEE---ecccCCCCCCCccccCCCCCCCCCCCCCCCcc
Q 002263 663 GLTS---P----GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 731 (946)
Q Consensus 663 gl~~---p----g~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~---~~~l~~~lp~~~v~~~~d~~~~~~~~~~~~i~ 731 (946)
+... + ...+.. +++.|+.|+|++| |.++|++.+ ++++...+-....... + ...+ +
T Consensus 223 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~----GlRiG~~~~~~~~~~~~~~~~~~l~~~~-------~-~~~~--~ 288 (405)
T 3k7y_A 223 NLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLY----GERAGALHIVCKNQEEKKIVFNNLCFIV-------R-KFYS--S 288 (405)
T ss_dssp STTGGGHHHHHHHTTTCCEEEEEECTTTSCCT----TTTEEEEEEECSSHHHHHHHHHHHHHHH-------H-TTTS--S
T ss_pred CcccchHHHHHHHhcCCcEEEEeeCCccCCCc----cccceEEEEEeCCHHHHHHHHHHHHHHH-------h-cccC--C
Confidence 1100 0 011223 4567788988654 899999864 2333221100000000 0 0001 1
Q ss_pred cCccchhhHHHHHHHHHHH--Hc---HhhHHHHHHHHHHHHHHHHHHHh----cc-CC--eeeccCCCceeeeEEEeccc
Q 002263 732 AAPWGSALILPISYTYIAM--MG---SKGLTEASKIAILNANYMAKRLE----KH-YP--ILFRGVNGTVAHEFIVDLRG 799 (946)
Q Consensus 732 ~~~~g~~~~~~~a~a~l~~--lG---~eGl~~~~~~~~~~a~~l~~~L~----~~-~~--v~~~~~~~~~~~e~v~~~~~ 799 (946)
.+.+++. ++..++.. ++ .+-++++.++...+.+++.+.|+ +. .. +.+..+++.++ +.++++
T Consensus 289 ~~~~~q~----~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f--~~~~l~- 361 (405)
T 3k7y_A 289 PVIHTNR----ILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLF--SFVPLL- 361 (405)
T ss_dssp CCHHHHH----HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSE--EECGGG-
T ss_pred CcHHHHH----HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEE--EecCCC-
Confidence 1111111 11222221 11 12244455556778889999998 64 21 21212233332 222322
Q ss_pred ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 002263 800 LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 859 (946)
Q Consensus 800 ~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e 859 (946)
. +.+++|.++|+.+. | +. ||++.- .++++|++++++|.++++.
T Consensus 362 --------~-~~~~~L~~~gV~v~----p--~~-Ris~a~-~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 362 --------A-KIAEHLKTHHIYII----N--NG-RINVSG-ITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp --------G-GGTTTTTTTTEECC----T--TS-EEEGGG-CCTTHHHHHHHHHHHHHHC
T ss_pred --------H-HHHHHHHHCCEeec----C--CC-eEEEec-cCHHHHHHHHHHHHHHHhh
Confidence 1 33466777888764 2 22 888864 3467899999999988653
No 429
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.29 E-value=1.3e-10 Score=135.26 Aligned_cols=275 Identities=14% Similarity=0.093 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc-ccCCCCE---EEEcCCCC-HHHHHHHHHhhcCCCeEEEEe-
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKT---FIIASNCH-PQTIDICITRADGFDIKVVVS- 174 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~-~~~~gd~---vvv~~~~H-ps~~~~~~~~a~~~gi~v~~~- 174 (946)
..++++.+++++|.+ ++.++++||.+.+.++.++.. .+.+||+ ||++ ..| +.+...+.. .|.+++.+
T Consensus 78 ~~~l~~~la~~~~~~--~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~~~~~~~~~~----~g~~~~~~~ 150 (467)
T 1ax4_A 78 YYDLKDKAKELFNYD--YIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHFDTTAAHVEL----NGCKAINIV 150 (467)
T ss_dssp HHHHHHHHHHHHCCC--EEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCCHHHHHHHHH----TTCEEEECB
T ss_pred HHHHHHHHHHHcCCC--cEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEe-ccccchhhHHHhc----cCCceeccc
Confidence 345678999999975 588899999888777655431 0015787 8888 555 666665542 35555543
Q ss_pred -----------------ccccccc-cC----CCEeEEEEEcC-CCc-eee---cchHHHHHHHHhCCcEEEEEecCccc-
Q 002263 175 -----------------DLKDIDY-KS----GDVCGVLVQYP-GTE-GEV---LDYGDFIKNAHANGVKVVMATDLLAL- 226 (946)
Q Consensus 175 -----------------~~~~l~~-i~----~~t~~v~v~~p-n~~-G~i---~di~~i~~~a~~~gal~~v~a~~~al- 226 (946)
|+++|++ +. ++|++|++.+| |.+ |.+ +++++|+++|+++|+++++|. ..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De-~~~~~ 229 (467)
T 1ax4_A 151 TEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDS-ARFCE 229 (467)
T ss_dssp CGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEEC-TTHHH
T ss_pred ccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEc-hhhhh
Confidence 2344555 54 37999999987 567 776 468899999999999999953 2222
Q ss_pred ----------cCCC-CCCCc------cceEEEecc-ccccccCCCCCCceEEEEEc-h-hhhhcCCCceEeEeecCCCCc
Q 002263 227 ----------TILK-PPGEL------GADIVVGSA-QRFGVPMGYGGPHAAFLATS-Q-EYKRMMPGRIVGVSIDSSGKP 286 (946)
Q Consensus 227 ----------~~l~-~~~~~------GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~-~-~~~~~lp~~~~G~s~d~~g~~ 286 (946)
+... ++.++ ++|+++.+. |.++.|. .|+++.+ + ++.+.+.... .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~------Gg~~~~~d~~~l~~~~~~~~----------~ 293 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNI------GGLVAIRDNEEIFTLARQRC----------V 293 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSS------CEEEEESSCHHHHHHHHHHH----------H
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCc------ceEEEeCCHHHHHHHHHhhc----------c
Confidence 1111 11222 489888887 7665432 2788777 5 6655431000 0
Q ss_pred ceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCcCeE
Q 002263 287 ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTV 366 (946)
Q Consensus 287 ~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~~~~~~~ 366 (946)
.+ +--...++.+. ....++.+++ ..+.. ++..++..++.+++++.|++.| +++..+.....+
T Consensus 294 ~~---------~~~~~~~~~~~---~~~~a~~~~l--~~~~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~ 355 (467)
T 1ax4_A 294 PM---------EGFVTYGGLAG---RDMAAMVQGL--EEGTE---EEYLHYRIGQVKYLGDRLREAG-IPIQYPTGGHAV 355 (467)
T ss_dssp HH---------TCSTTTTTCCH---HHHHHHHHHH--HHTTC---HHHHHHHHHHHHHHHHHHHHTT-CCBCSSCCSSEE
T ss_pred cc---------ccccccCCccc---hHHHHHHHHH--HHhhh---hhHHHHHHHHHHHHHHHHHhCC-CCcccCCCceEE
Confidence 00 00001122221 1122222122 22211 1122233466788899998766 766532222233
Q ss_pred EEe-------cC--C--HHHHHHHH-HHcCCeeeee-----------c------CCeEEEEecc-CCCHHHHHHHHHHHh
Q 002263 367 KVK-------CA--D--AHAIASAA-YKIEMNLRVV-----------D------SNTVTASFDE-TTTLEDVDKLFIVFA 416 (946)
Q Consensus 367 ~i~-------~~--~--~~~v~~~L-~~~GI~~~~~-----------~------~~~lris~~~-~~t~edid~ll~~l~ 416 (946)
.+. .+ + ..++.++| .++||.+... . .+.+|+|+.. .+|++|+++++++|.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~ 435 (467)
T 1ax4_A 356 FVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALI 435 (467)
T ss_dssp EEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHH
T ss_pred EEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHH
Confidence 344 32 2 57899999 8889987541 0 2689999994 589999999999997
Q ss_pred C
Q 002263 417 G 417 (946)
Q Consensus 417 ~ 417 (946)
.
T Consensus 436 ~ 436 (467)
T 1ax4_A 436 G 436 (467)
T ss_dssp T
T ss_pred H
Confidence 5
No 430
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.29 E-value=6.4e-11 Score=136.01 Aligned_cols=270 Identities=12% Similarity=0.044 Sum_probs=161.4
Q ss_pred HHHHHHHHHhCC------CCc--ceEEcccHHHHHHHHH--HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 103 NFQTMIADLTGL------PMS--NASLLDEGTAAAEAMA--MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 103 e~q~~la~L~g~------~~~--~~sl~~~~Ta~~ea~~--la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
++++.++++++. ++. ++.++.|+|.+++.++ +++ .. +||+|++++..|+.+...++. .|.+++
T Consensus 96 ~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~-~~--~gd~Vlv~~p~~~~~~~~~~~----~g~~~~ 168 (420)
T 4f4e_A 96 AYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRT-LN--PKAKVAISDPSWENHRALFDM----AGFEVV 168 (420)
T ss_dssp HHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHH-HC--TTCCEEEEESCCHHHHHHHHH----TTCCEE
T ss_pred HHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHH-hC--CCCEEEEeCCCcHhHHHHHHH----cCCeEE
Confidence 345566666643 344 6888899998887763 332 23 899999999999998877653 477777
Q ss_pred Eecc----------ccccc-cC---CCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCCC---
Q 002263 173 VSDL----------KDIDY-KS---GDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILKP--- 231 (946)
Q Consensus 173 ~~~~----------~~l~~-i~---~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~~--- 231 (946)
.++. +++++ +. ++++++++.+| |.+|.+. ++++|+++|+++|+++++|. ..+......
T Consensus 169 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De-~y~~~~~~~~~~ 247 (420)
T 4f4e_A 169 AYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDI-AYQGFGESIEAD 247 (420)
T ss_dssp EEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE-SCTTSSSCTTGG
T ss_pred EeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc-ccccccCCcchh
Confidence 6654 33444 54 67888888888 6799884 57899999999999999953 211111110
Q ss_pred -------CCCccceEEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEeccccccccc
Q 002263 232 -------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 300 (946)
Q Consensus 232 -------~~~~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~ir 300 (946)
++..+-+++++|. |.|+.| |-.+|++++ ++++++.+-.. + .+ ..
T Consensus 248 ~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~~~~~~~~~~~~~~~~~-----------------~---~~-~~ 302 (420)
T 4f4e_A 248 AAAVRLFAAANLNVFVSSSFSKSFSLY----GERVGALSIITDSKDEAARVLSQ-----------------L---KR-VI 302 (420)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCG----GGCEEEEEEECSSHHHHHHHHHH-----------------H---HH-HH
T ss_pred hHHHHHHHhcCCCEEEEEeCCccCcCc----CCCcEEEEEEcCCHHHHHHHHHH-----------------H---HH-HH
Confidence 1123557888887 877532 223788764 23333221000 0 00 00
Q ss_pred ccccCCCccchHHHHHHHHHHHHHHh-----ChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcCeEEE-ecC
Q 002263 301 RDKATSNICTAQALLANMAAMYAVYH-----GPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFDTVKV-KCA 371 (946)
Q Consensus 301 re~aTsni~t~~~l~a~~aa~y~~~~-----g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~~~~i-~~~ 371 (946)
| ..+++..+ ....+..+.+ ... ..+.++++.++..++.+++.+.|++++ ++++.... ..-+.+ ..
T Consensus 303 ~-~~~~~~~~-~~~~~~~~~l--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~- 376 (420)
T 4f4e_A 303 R-TNYSNPPT-HGGAIVAAVL--ASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ-RGMFSYSGL- 376 (420)
T ss_dssp H-TTTSSCCS-HHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS-CSSEEECCC-
T ss_pred h-cccCCCCH-HHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC-ccEEEEeCC-
Confidence 0 12222221 1111111111 110 134467888889999999999999872 24433111 111222 22
Q ss_pred CHHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 372 DAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 372 ~~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
....+.+.|.++||.+... .|+|+... +++++++++++|+
T Consensus 377 ~~~~~~~~l~~~gI~v~~~----~Ris~~~~-~~~~i~~~~~~l~ 416 (420)
T 4f4e_A 377 TSAQVDRLREEFGIYAVST----GRICVAAL-NTRNLDVVANAIA 416 (420)
T ss_dssp CHHHHHHHHHHHCEECCTT----SEEEGGGC-CTTTHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEecCC----CeEEEecC-CHHHHHHHHHHHH
Confidence 2566777788889988752 39998754 5566999999886
No 431
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.28 E-value=3.6e-11 Score=137.53 Aligned_cols=269 Identities=12% Similarity=0.044 Sum_probs=160.7
Q ss_pred HHHHHHHHHHh-C-----CCCcceEE--cccHHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 102 LNFQTMIADLT-G-----LPMSNASL--LDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 102 ~e~q~~la~L~-g-----~~~~~~sl--~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
.++++.+++++ + .++.++.+ +.|||.+.+.+....+ +. +||+|+++...|+.+...++ ..|++++
T Consensus 76 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~--~gd~Vl~~~p~~~~~~~~~~----~~g~~~~ 149 (412)
T 1yaa_A 76 PSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFF--PDKLVYLSKPTWANHMAIFE----NQGLKTA 149 (412)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHC--TTCCEEEEESCCTTHHHHHH----TTTCCEE
T ss_pred HHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhC--CCCEEEEeCCCCccHHHHHH----HcCceEE
Confidence 35667778777 3 14567888 9999988887632222 23 78999999999999887764 3577777
Q ss_pred Eecc----------ccccc-cCC---CEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCCC----
Q 002263 173 VSDL----------KDIDY-KSG---DVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK---- 230 (946)
Q Consensus 173 ~~~~----------~~l~~-i~~---~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l~---- 230 (946)
.++. +++++ +++ .++++++.+| |.+|.+. ++++|+++|+++|+++++|.-...+..-.
T Consensus 150 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 229 (412)
T 1yaa_A 150 TYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKD 229 (412)
T ss_dssp EEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHH
T ss_pred EEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccch
Confidence 6654 23444 432 2445555788 6699885 57789999999999999953111221100
Q ss_pred --CC---CCccc----eEEEecc-ccccccCCCCCCceEEEE--E-----chh----hhhcCCCceEeEeecCCCCcceE
Q 002263 231 --PP---GELGA----DIVVGSA-QRFGVPMGYGGPHAAFLA--T-----SQE----YKRMMPGRIVGVSIDSSGKPALR 289 (946)
Q Consensus 231 --~~---~~~Ga----Di~v~s~-k~lg~P~~~GGP~~g~l~--~-----~~~----~~~~lp~~~~G~s~d~~g~~~~~ 289 (946)
+. ...+. +++++|. |.|+. . |-.+|+++ + +++ +++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~---GlriG~~~~~~~~~~~~~~~~~~l~~~l~----------------- 288 (412)
T 1yaa_A 230 AYAVRLGVEKLSTVSPVFVCQSFAKNAGM-Y---GERVGCFHLALTKQAQNKTIKPAVTSQLA----------------- 288 (412)
T ss_dssp THHHHHHHHHTTTTCCEEEEEECTTTSCC-G---GGCEEEEEEECCSCTTHHHHHHHHHHHHH-----------------
T ss_pred hHHHHHHHhcCCCCcceEEEeccCCCCCC-c---CCcceEEEEEecCCCCCHHHHHHHHHHHH-----------------
Confidence 00 11333 5677776 76642 1 12368988 6 444 443320
Q ss_pred EecccccccccccccCCCccchHHHHHHHHHHHHHHhC-----hhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCC
Q 002263 290 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG-----PEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLP 361 (946)
Q Consensus 290 l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g-----~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~ 361 (946)
...+ .+.+.++.....+..+++ .... .+.++++.++..++.+++.+.|+++| ++++....
T Consensus 289 --------~~~~--~~~~~~~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 356 (412)
T 1yaa_A 289 --------KIIR--SEVSNPPAYGAKIVAKLL--ETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQ 356 (412)
T ss_dssp --------HHHH--TTTSSCCHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHC
T ss_pred --------HHHh--hccCCCChHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccC
Confidence 0001 111111112222222222 1110 24678888999999999999998875 24443211
Q ss_pred CcCeEEE-ecCCHHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 362 FFDTVKV-KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 362 ~~~~~~i-~~~~~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
..-+.+ .. ....+.+.|.++||.+.. .+|+|++. .+++|+++++++|+
T Consensus 357 -~~~~~~~~~-~~~~~~~~l~~~gi~v~~----~~Ris~~~-~~~~~i~~~~~~l~ 405 (412)
T 1yaa_A 357 -CGMFSFTGL-TPQMVKRLEETHAVYLVA----SGRASIAG-LNQGNVEYVAKAID 405 (412)
T ss_dssp -CSSEEECCC-CHHHHHHHHHHHCEECCT----TSEEEGGG-CCTTTHHHHHHHHH
T ss_pred -ceEEEeeCC-CHHHHHHHHHhCCEEecc----CcEEEEcc-CCHhHHHHHHHHHH
Confidence 111222 22 255675666678998874 58999985 58999999999986
No 432
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.28 E-value=2.6e-10 Score=134.03 Aligned_cols=276 Identities=13% Similarity=0.129 Sum_probs=168.5
Q ss_pred hhhHHHHHHHHHHHHHHHh-CC--CCcceEEcccHHHHHHHHHHHhccccCCC----CEEEEcCCCCHHHHHHHHHhhcC
Q 002263 94 AQGRLESLLNFQTMIADLT-GL--PMSNASLLDEGTAAAEAMAMCNNIQKGKK----KTFIIASNCHPQTIDICITRADG 166 (946)
Q Consensus 94 sqg~l~~l~e~q~~la~L~-g~--~~~~~sl~~~~Ta~~ea~~la~~~~~~~g----d~vvv~~~~Hps~~~~~~~~a~~ 166 (946)
++|..+.-....+.+.+.. |. ++.++.+++|++.++..++.++. . +| |+|+++.-.|+.+...++.
T Consensus 128 ~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~-~--~gd~~~d~Vlv~~p~y~~~~~~~~~---- 200 (498)
T 3ihj_A 128 SQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV-S--GGGKSRTGVMIPIPQYPLYSAVISE---- 200 (498)
T ss_dssp CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-C--CCGGGSEEEEEEESCCTHHHHHHHH----
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-C--CCCCCCCEEEEeCCCchhHHHHHHH----
Confidence 3454443333344444554 34 56789999999988777665553 2 44 5999999999999888753
Q ss_pred CCeEEEEecc----------ccccc-cCC-----CEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccc
Q 002263 167 FDIKVVVSDL----------KDIDY-KSG-----DVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLAL 226 (946)
Q Consensus 167 ~gi~v~~~~~----------~~l~~-i~~-----~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al 226 (946)
.|.+++.+++ ++|++ +.+ ++++|++.+| |.+|.+. ++++|+++|+++|++++++ +..+.
T Consensus 201 ~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~D-e~y~~ 279 (498)
T 3ihj_A 201 LDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLAD-EVYQD 279 (498)
T ss_dssp TTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE-CTTTT
T ss_pred cCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEE-cCccc
Confidence 4777777654 33444 433 5899999998 6799984 5788999999999999994 33332
Q ss_pred cCCCC---CC-------Cccc-------eEEEecc-ccc-cccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCC
Q 002263 227 TILKP---PG-------ELGA-------DIVVGSA-QRF-GVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSG 284 (946)
Q Consensus 227 ~~l~~---~~-------~~Ga-------Di~v~s~-k~l-g~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g 284 (946)
..... .. +++. -|+++|. |.| |.| |+ .+|++.+ ++++++.+..
T Consensus 280 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~-G~---R~G~~~~~~~~~~l~~~l~~----------- 344 (498)
T 3ihj_A 280 NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGEC-GY---RGGYMEVINLHPEIKGQLVK----------- 344 (498)
T ss_dssp CBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCS-SS---CCEEEEEESCCHHHHHHHHH-----------
T ss_pred cccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCc-cc---ceEEEEEecCCHHHHHHHHH-----------
Confidence 22211 10 1121 1566775 888 323 22 3588874 5555554300
Q ss_pred CcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhCh------------hhHHHHHHHHHHHHHHHHHHHhcC
Q 002263 285 KPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP------------EGLKTIAQRVHGLAGTFALGLKKL 352 (946)
Q Consensus 285 ~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~------------~Gl~~i~~~~~~~a~~l~~~L~~~ 352 (946)
.+ ..+.|++......+++ ++.. +-++++.++..++++++.+.|+++
T Consensus 345 --------------~~----~~~~~~~~~~q~a~~~----~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 402 (498)
T 3ihj_A 345 --------------LL----SVRLCPPVSGQAAMDI----VVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQV 402 (498)
T ss_dssp --------------HH----HHSCCCCHHHHHHHHH----HTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred --------------HH----hccCCCCHHHHHHHHH----HhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 0123333322222221 2211 123566778889999999999998
Q ss_pred -CCEEEcCC--CCcCeEEEecC----------C--HHH--HHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHH
Q 002263 353 -GTVEVQGL--PFFDTVKVKCA----------D--AHA--IASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDV 408 (946)
Q Consensus 353 -g~~~~~~~--~~~~~~~i~~~----------~--~~~--v~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edi 408 (946)
| +++... .++--+.+..+ + ..+ +.+.|.++||.+... ..+++|+++. .+++++
T Consensus 403 ~g-~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~--~~~e~l 479 (498)
T 3ihj_A 403 PG-IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL--PPVEKL 479 (498)
T ss_dssp TT-EECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC--SCHHHH
T ss_pred CC-cEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC--CCHHHH
Confidence 6 887642 12211223322 1 233 355666789987542 1358999994 789999
Q ss_pred HHHHHHHhC
Q 002263 409 DKLFIVFAG 417 (946)
Q Consensus 409 d~ll~~l~~ 417 (946)
+++++.|+.
T Consensus 480 ~~~i~~L~~ 488 (498)
T 3ihj_A 480 KTVLQKVKD 488 (498)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999863
No 433
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.28 E-value=7.7e-11 Score=134.20 Aligned_cols=272 Identities=11% Similarity=0.073 Sum_probs=167.5
Q ss_pred HHHHHHHHHHhCC-----CC-cceEEcccHHHHHHHHHHHhccccCCCC----EEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 102 LNFQTMIADLTGL-----PM-SNASLLDEGTAAAEAMAMCNNIQKGKKK----TFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 102 ~e~q~~la~L~g~-----~~-~~~sl~~~~Ta~~ea~~la~~~~~~~gd----~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
.++++.+|++++. .+ .++.+++|++.++..++.++. . +|| +|+++.-.|+.+...++ ..|+++
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-~--~Gd~~~~~Vlv~~P~y~~~~~~~~----~~g~~~ 143 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALS-S--LARSQPVSVVAAAPFYSTYVEETT----YVRSGM 143 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHH-H--TSSSSSEEEEECSSCCTHHHHHHH----TTCBTT
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhc-C--CCCCCcceEEEcCCCchhHHHHHH----HcCCeE
Confidence 3566777777762 23 578899999887776665552 3 788 99999999999887764 346666
Q ss_pred EEecc--ccccccCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCC-CCCccceEEEecc-cc
Q 002263 172 VVSDL--KDIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP-PGELGADIVVGSA-QR 246 (946)
Q Consensus 172 ~~~~~--~~l~~i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~-~~~~GaDi~v~s~-k~ 246 (946)
+.+++ +.++ .+++++|++.+| |.+|.+.+ +|++.+|+++++++++ +........+ ....+.+|+++|. |.
T Consensus 144 ~~~~~d~~~l~--~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~D-e~y~~~~~~~l~~~~~~~i~~~S~SK~ 218 (391)
T 3bwn_A 144 YKWEGDAWGFD--KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHD-FAYYWPHYTPITRRQDHDIMLFTFSKI 218 (391)
T ss_dssp EEEEEESTTCC--CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEE-CTTCSTTTSCCCCCBCCSEEEEEHHHH
T ss_pred EEecCCHHHcC--CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEe-CCCCCCCCCccccCCCCeEEEEechhh
Confidence 55544 3333 357899989998 67999875 5666445555988884 2322211111 1245778999997 87
Q ss_pred ccccCCCCCCceEEEEE-chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHH--H
Q 002263 247 FGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY--A 323 (946)
Q Consensus 247 lg~P~~~GGP~~g~l~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y--~ 323 (946)
|+.| |--+|++++ ++++++.+... +...+.+..+ ....+..+++- .
T Consensus 219 ~g~~----GlRiG~~~~~~~~l~~~l~~~--------------------------~~~~~~~~~~-~~q~a~~~~l~~~~ 267 (391)
T 3bwn_A 219 TGHA----GSRIGWALVKDKEVAKKMVEY--------------------------IIVNSIGVSK-ESQVRTAKILNVLK 267 (391)
T ss_dssp HSCG----GGCEEEEEECCHHHHHHHHHH--------------------------HHHHHSSCCH-HHHHHHHHHHHHHH
T ss_pred cCCC----ccceEEEEecCHHHHHHHHHH--------------------------hcccccCCCH-HHHHHHHHHHhCcc
Confidence 7533 223599998 66776554100 0000111111 11112222220 0
Q ss_pred HHh-----ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CC--c---------CeEEEecCCHHHHHHHHHHcCC
Q 002263 324 VYH-----GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PF--F---------DTVKVKCADAHAIASAAYKIEM 385 (946)
Q Consensus 324 ~~~-----g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~--~---------~~~~i~~~~~~~v~~~L~~~GI 385 (946)
.++ ..+.++++.++..++.+++.+.|++++++++... .. | --+.+++++...+.+.|.++||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV 347 (391)
T 3bwn_A 268 ETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKV 347 (391)
T ss_dssp HHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTE
T ss_pred hhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCE
Confidence 111 1456788888999999999999999843776531 10 0 0133454433456677888999
Q ss_pred eeeee-----cCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 002263 386 NLRVV-----DSNTVTASFDETTTLEDVDKLFIVFAGG 418 (946)
Q Consensus 386 ~~~~~-----~~~~lris~~~~~t~edid~ll~~l~~~ 418 (946)
.+..- .++.+|+|+. +++++++++++.|+.-
T Consensus 348 ~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~~ 383 (391)
T 3bwn_A 348 MSRAGERCGSDKKHVRVSML--SREDVFNVFLERLANM 383 (391)
T ss_dssp ECEEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHSC
T ss_pred EEccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 88652 2578999998 4899999999999753
No 434
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.27 E-value=4.9e-10 Score=132.89 Aligned_cols=283 Identities=12% Similarity=0.024 Sum_probs=162.9
Q ss_pred cceEEcccHHHHHHHHHHHhcc--ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc------------ccccc-
Q 002263 117 SNASLLDEGTAAAEAMAMCNNI--QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL------------KDIDY- 181 (946)
Q Consensus 117 ~~~sl~~~~Ta~~ea~~la~~~--~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~------------~~l~~- 181 (946)
.++.+++|+|+++..++.++.. ..++||+|+++...|+++...++ ..|.+++.+++ ++|++
T Consensus 165 ~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~----~~g~~~~~v~~~~~~~~~~~~d~~~l~~~ 240 (533)
T 3f6t_A 165 TDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPE----LKDYELVEVDLHSYEKNDWEIEPNEIEKL 240 (533)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGG----GGGSEEEEECCCEETTTTSEECHHHHHHH
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHH----HcCCeEEEEEecCCcccCCCCCHHHHHHH
Confidence 4788889999888776655200 01278999999999999877653 34666666543 34555
Q ss_pred cCCCEeEEEEEcC-CCceeecchH---HHHHHHH-hCCcEEEEEecCccccCCCCC----CCccceEEEecc-ccccccC
Q 002263 182 KSGDVCGVLVQYP-GTEGEVLDYG---DFIKNAH-ANGVKVVMATDLLALTILKPP----GELGADIVVGSA-QRFGVPM 251 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~di~---~i~~~a~-~~gal~~v~a~~~al~~l~~~----~~~GaDi~v~s~-k~lg~P~ 251 (946)
+++++++|++++| |.+|.+.+.+ +|+++|+ ++|+++++|. ..+......+ ...+.+++++|. |.||.|
T Consensus 241 l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~- 318 (533)
T 3f6t_A 241 KDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDE-VYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCT- 318 (533)
T ss_dssp SCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEEC-TTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCG-
T ss_pred hCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcC-CccccccCccCHhhcCCCCEEEEecCcccCCCc-
Confidence 7789999999998 6699997655 8888888 6899999953 2221111111 112456899997 877532
Q ss_pred CCCCCceEEEEEchh-----hhhcCCCceEeE-ee---cCCCCcceEEecccc-ccccccc--ccCCCccchHHHHHHHH
Q 002263 252 GYGGPHAAFLATSQE-----YKRMMPGRIVGV-SI---DSSGKPALRVAMQTR-EQHIRRD--KATSNICTAQALLANMA 319 (946)
Q Consensus 252 ~~GGP~~g~l~~~~~-----~~~~lp~~~~G~-s~---d~~g~~~~~l~l~tr-e~~irre--~aTsni~t~~~l~a~~a 319 (946)
|--+|+++++++ +++.|++..... .. .....+ ..+.+-.| -...++. ..+++.. ......++
T Consensus 319 ---G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p-~~~~~i~rl~~~~~~~~~~~~~~~~--~~~q~a~a 392 (533)
T 3f6t_A 319 ---GWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDP-DKMKFIDRLCADSRSIGLYHTAGLS--TPQQIMEA 392 (533)
T ss_dssp ---GGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCG-GGCCHHHHHHHHHTTTTTGGGCSCC--HHHHHHHH
T ss_pred ---ccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCc-chhhhHHHHHHHHHHHHHhcccCCC--hHHHHHHH
Confidence 112799999887 666664211000 00 000000 00000000 0000111 1122222 11111111
Q ss_pred --HHHHHHh-------ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCcCeEEEecC-----------------
Q 002263 320 --AMYAVYH-------GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA----------------- 371 (946)
Q Consensus 320 --a~y~~~~-------g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~~~~~i~~~----------------- 371 (946)
++. .+. ..+-++++.++..++.++|.+.|. +| +.+... ..+ +.++++
T Consensus 393 ~~a~~-~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~-~~~~~~~~g~~--~~~~l~~~~~~~~g~~~~~~~~~ 467 (533)
T 3f6t_A 393 LFSMT-HLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-AP-KDETDTNTHYY--SLIDIYRLAEKIYGKEFRDYLTN 467 (533)
T ss_dssp HHHHH-HHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CC-CCCSTTBCCSE--EEEEHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHH-HHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CC-ccccCCCceEE--EEEehHhhhhhccchHHHHHhhc
Confidence 111 121 234577888888899999999997 76 654321 122 222221
Q ss_pred --CHHHHHHHHH-HcCCeeeee-----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 372 --DAHAIASAAY-KIEMNLRVV-----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 372 --~~~~v~~~L~-~~GI~~~~~-----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
...++..+|. ++||.+..- ..+.+|+|+.. .++++++++++.|..
T Consensus 468 ~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~-~~~e~i~~~i~~L~~ 520 (533)
T 3f6t_A 468 NFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQAN-LPTEDYALIGKQVLE 520 (533)
T ss_dssp HCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSS-SCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEee-CCHHHHHHHHHHHHH
Confidence 2335555554 679987532 25789999854 578899999999974
No 435
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.27 E-value=3.2e-10 Score=130.14 Aligned_cols=276 Identities=13% Similarity=0.097 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHhCCCC-cceEEcccHHHHHHHHHH-HhccccCCCCEEEEcCC-CCHHHHHHHHHh-hc-----CCCe-
Q 002263 100 SLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIASN-CHPQTIDICITR-AD-----GFDI- 169 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~-~~~sl~~~~Ta~~ea~~l-a~~~~~~~gd~vvv~~~-~Hps~~~~~~~~-a~-----~~gi- 169 (946)
...++++.++++++.+. .++.+++|||.++++++. +..+. +++ +|++.+. .|......+... .+ .++.
T Consensus 85 ~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~-~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~ 162 (426)
T 1sff_A 85 PYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT-KRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (426)
T ss_dssp HHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH-TCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCC
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhh-CCC-eEEEECCCcCCCchHhhhhcCCccccccccCCC
Confidence 34567789999993233 678899999988887755 22222 144 7777654 555444443321 00 1110
Q ss_pred --EEEEecc-------------ccccc-cC-----CCEeEEEEE-cCCCceeecc----hHHHHHHHHhCCcEEEEEecC
Q 002263 170 --KVVVSDL-------------KDIDY-KS-----GDVCGVLVQ-YPGTEGEVLD----YGDFIKNAHANGVKVVMATDL 223 (946)
Q Consensus 170 --~v~~~~~-------------~~l~~-i~-----~~t~~v~v~-~pn~~G~i~d----i~~i~~~a~~~gal~~v~a~~ 223 (946)
.++.++. ++|++ +. +++++|+++ .++.+|.+.+ +++|.++|+++|+++++|. .
T Consensus 163 ~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De-~ 241 (426)
T 1sff_A 163 PGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE-V 241 (426)
T ss_dssp CSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEEC-T
T ss_pred CCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEec-h
Confidence 1333332 34444 43 468888775 3444998887 9999999999999999942 3
Q ss_pred cc-ccCCCCC---CC--ccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccc
Q 002263 224 LA-LTILKPP---GE--LGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQ 297 (946)
Q Consensus 224 ~a-l~~l~~~---~~--~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~ 297 (946)
.+ ++..... .. ..+|++.. +|.|+. |--+|++++++++++.+... .
T Consensus 242 ~~~~~~~g~~~~~~~~~~~~di~s~-sK~~~~-----GlriG~~~~~~~~~~~l~~~----------~------------ 293 (426)
T 1sff_A 242 QSGAGRTGTLFAMEQMGVAPDLTTF-AKSIAG-----GFPLAGVTGRAEVMDAVAPG----------G------------ 293 (426)
T ss_dssp TTTTTTTSSSSGGGGTTSCCSEEEE-CGGGGT-----SSCCEEEEEEHHHHTTSCTT----------S------------
T ss_pred hhccCcccchhhhhhcCCCCCEEEE-cccccC-----CCceEEEEEcHHHHhhhccC----------C------------
Confidence 33 3211111 12 24777633 388751 22368999998887766211 0
Q ss_pred cccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCCCcCeEEEec---
Q 002263 298 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFFDTVKVKC--- 370 (946)
Q Consensus 298 ~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~~~~~i~~--- 370 (946)
...|.+. +.....+..+++ .++..+ ++.+++.++.++++++|+++ +.+.... +...-+.+.+
T Consensus 294 ----~~~~~~~-~~~~~~a~~aal--~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 362 (426)
T 1sff_A 294 ----LGGTYAG-NPIACVAALEVL--KVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDVR-GLGAMIAIELFED 362 (426)
T ss_dssp ----BCCSSSS-CHHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEEE-EETTEEEEEEBGG
T ss_pred ----cCcCCCC-CHHHHHHHHHHH--HHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-EEEEEEEEEEecC
Confidence 0111111 112222333333 333222 35566777788888888763 2122111 1111233443
Q ss_pred -----CC---HHHHHHHHHHcCCeeeeec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 371 -----AD---AHAIASAAYKIEMNLRVVD--SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 -----~~---~~~v~~~L~~~GI~~~~~~--~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+. ..++.++|.++||.+.... ++.+|++++..++++|+++++++|..
T Consensus 363 ~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 419 (426)
T 1sff_A 363 GDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQ 419 (426)
T ss_dssp GCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 22 5689999999999987654 58899999999999999999999963
No 436
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.25 E-value=2.5e-10 Score=132.73 Aligned_cols=283 Identities=14% Similarity=0.089 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-c--cc--CCCCEEEEcC-CCCHHHHHHHHH---------hhc
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-I--QK--GKKKTFIIAS-NCHPQTIDICIT---------RAD 165 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~--~~--~~gd~vvv~~-~~Hps~~~~~~~---------~a~ 165 (946)
..++++.++++++.+..++.++++||.++++++.+.+ + .+ ..+++||+.+ .-|..+...+.. ...
T Consensus 120 ~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 199 (457)
T 3tfu_A 120 AARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWT 199 (457)
T ss_dssp HHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC--------
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccccccccc
Confidence 3467789999998776789899999999888764433 1 11 1345777655 555544433311 000
Q ss_pred --CCCeEEEEe--------ccccccc-cC---CCEeEEEEEc-C-CCceeecc----hHHHHHHHHhCCcEEEEEecCc-
Q 002263 166 --GFDIKVVVS--------DLKDIDY-KS---GDVCGVLVQY-P-GTEGEVLD----YGDFIKNAHANGVKVVMATDLL- 224 (946)
Q Consensus 166 --~~gi~v~~~--------~~~~l~~-i~---~~t~~v~v~~-p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~- 224 (946)
..++..... ++++|++ ++ +++++|++.. + |..|.+.+ +++|.++|+++|+++++|. ..
T Consensus 200 ~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE-v~~ 278 (457)
T 3tfu_A 200 DVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDE-IAT 278 (457)
T ss_dssp --CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEEC-TTT
T ss_pred CCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEc-Ccc
Confidence 113333322 3355665 54 6788888776 5 67888875 9999999999999999952 22
Q ss_pred cccCCCCC---CCc--cceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccc
Q 002263 225 ALTILKPP---GEL--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHI 299 (946)
Q Consensus 225 al~~l~~~---~~~--GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~i 299 (946)
.++..... ..+ ..|+++. +|.+++ |...+|++.+++++.+.+... ..+. +
T Consensus 279 g~gr~G~~~a~~~~~~~pdiit~-sK~l~g----G~~~lG~v~~~~~i~~~~~~~-------~~~~--~----------- 333 (457)
T 3tfu_A 279 GFGRTGALFAADHAGVSPDIMCV-GKALTG----GYLSLAATLCTADVAHTISAG-------AAGA--L----------- 333 (457)
T ss_dssp TTTTTSSSSTHHHHTCCCSEEEE-CGGGGT----TSSCCEEEEEEHHHHHHHHHS-------SSCS--C-----------
T ss_pred CCccccchhHhHhcCCCceEEEE-ChhhhC----CCcceEEEEEcHHHHHHhhcc-------CCCc--e-----------
Confidence 23321111 112 3577633 487642 324578888998887765100 0000 0
Q ss_pred cccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEc-CCCCcCeEEEecCC-HH
Q 002263 300 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQ-GLPFFDTVKVKCAD-AH 374 (946)
Q Consensus 300 rre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~-~~~~~~~~~i~~~~-~~ 374 (946)
....|.+. .+.+..+..+++ ..+..+ ++.++..++.++++++|+++. ++..+ ....+-.+.+..+. +.
T Consensus 334 -~~~~t~~~-n~~a~aaa~aaL--~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~~~~~~ 406 (457)
T 3tfu_A 334 -MHGPTFMA-NPLACAVSVASV--ELLLGQ---DWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDRPVDLA 406 (457)
T ss_dssp -CCCCTTTT-CHHHHHHHHHHH--HHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESSCCCHH
T ss_pred -eEecCCCc-CHHHHHHHHHHH--HHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECCcccHH
Confidence 00111111 111222222332 333222 456667778888999888752 13222 11122223332222 78
Q ss_pred HHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 375 AIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 375 ~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++.++|.++||.++.. .+.+|+++....|++|+++++++|+.
T Consensus 407 ~~~~~l~~~Gv~v~~~-~~~lRi~p~~~~t~eei~~~l~~L~~ 448 (457)
T 3tfu_A 407 VATPAALDRGVWLRPF-RNLVYAMPPYICTPAEITQITSAMVE 448 (457)
T ss_dssp HHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEEec-CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 8999999999998763 57899999999999999999999974
No 437
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.25 E-value=3.6e-10 Score=129.81 Aligned_cols=266 Identities=16% Similarity=0.135 Sum_probs=164.0
Q ss_pred HHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHHHhccccCCCCEEEEcC-CCCHHHHHHHHH------hhcCC---CeE
Q 002263 102 LNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIAS-NCHPQTIDICIT------RADGF---DIK 170 (946)
Q Consensus 102 ~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~-~~Hps~~~~~~~------~a~~~---gi~ 170 (946)
.++.+.+++++|.+ +.++.+++||+.+++.++.+.+.. +|++||+.+ ..|+.+...+.. +...+ ...
T Consensus 89 ~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~--~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (419)
T 2eo5_A 89 LELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNT--GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPG 166 (419)
T ss_dssp HHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTT--SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTT
T ss_pred HHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHh--hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCC
Confidence 45667899999987 668989999998887766543321 378898877 566555544421 00011 113
Q ss_pred EEEec------------------------ccccc-c-cC-----CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCC
Q 002263 171 VVVSD------------------------LKDID-Y-KS-----GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANG 214 (946)
Q Consensus 171 v~~~~------------------------~~~l~-~-i~-----~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~g 214 (946)
++.++ +++|+ + ++ +++++|++... |.+|.+.+ +++|.++|+++|
T Consensus 167 ~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~ 246 (419)
T 2eo5_A 167 VIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYG 246 (419)
T ss_dssp EEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHT
T ss_pred CEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 33333 23566 6 54 46776666432 45798776 999999999999
Q ss_pred cEEEEEecCcc-ccCCCCC---C--CccceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcc
Q 002263 215 VKVVMATDLLA-LTILKPP---G--ELGADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 287 (946)
Q Consensus 215 al~~v~a~~~a-l~~l~~~---~--~~GaDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~ 287 (946)
+++++| +..+ ++..... . ....|+++. +|+|+. | -.+|+++++++++ .+ ....
T Consensus 247 ~~li~D-E~~~~~g~~g~~~~~~~~~~~~d~~t~-sK~~~~-----G~~riG~~~~~~~~~-~~-~~~~----------- 306 (419)
T 2eo5_A 247 ILLVDD-EVQMGLGRTGKLFAIENFNTVPDVITL-AKALGG-----GIMPIGATIFRKDLD-FK-PGMH----------- 306 (419)
T ss_dssp CEEEEE-CTTTTTTTTSSSSGGGGGTCCCSEEEE-CGGGGT-----TTSCCEEEEEEGGGC-CC----------------
T ss_pred CEEEEe-ccccCCccCcchhhHHhcCCCCCEEEe-cccccC-----CccceEEEEEchHhh-cC-Cccc-----------
Confidence 999994 3322 3322111 1 124576643 388752 3 3478898888776 55 1100
Q ss_pred eEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCCCCcCeE
Q 002263 288 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTV 366 (946)
Q Consensus 288 ~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~~~~ 366 (946)
..|.+.. ..+..+..+++ .. ++++.+++.++.++|.+.|+++ . .+.+. ..-+
T Consensus 307 ---------------~~t~~~n-~~~~~aa~aal--~~-----~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~--g~~~ 359 (419)
T 2eo5_A 307 ---------------SNTFGGN-ALACAIGSKVI--DI-----VKDLLPHVNEIGKIFAEELQGLAD--DVRGI--GLAW 359 (419)
T ss_dssp -----------------CCCCC-HHHHHHHHHHH--HH-----HHHHHHHHHHHHHHHHHHHTTSSS--EEEEE--TTEE
T ss_pred ---------------CCCCCCC-HHHHHHHHHHH--HH-----HHHHHHHHHHHHHHHHHHHHHhhh--heEee--eEEE
Confidence 1122111 11222333332 22 1226778888899999999875 2 11111 1224
Q ss_pred EEec-C--C-HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 367 KVKC-A--D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 367 ~i~~-~--~-~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+ + . +. +.+.|.++||.++....+.+|++++..+|++|+++++++|..
T Consensus 360 ~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~ 413 (419)
T 2eo5_A 360 GLEYNEKKVRDR-IIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKK 413 (419)
T ss_dssp EEECSCHHHHHH-HHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEecCccHHH-HHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4555 3 2 45 889999999999876568899999999999999999999963
No 438
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.24 E-value=3.7e-10 Score=130.99 Aligned_cols=271 Identities=13% Similarity=0.058 Sum_probs=158.4
Q ss_pred HHHHHHHHHHh-CCC-----CcceEE--cccHHHHHHHH--HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 002263 102 LNFQTMIADLT-GLP-----MSNASL--LDEGTAAAEAM--AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 171 (946)
Q Consensus 102 ~e~q~~la~L~-g~~-----~~~~sl--~~~~Ta~~ea~--~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v 171 (946)
.++++.+++++ |.+ +.++.+ +.|||.+.+.+ +++. .. +||+|++++..|+.+...++.+++..|.++
T Consensus 97 ~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~-~~--~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v 173 (448)
T 3meb_A 97 PLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHL-WM--PKAEFYMPSTTWPNHYGIYDKVFNKLKVPY 173 (448)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHH-HC--TTCCEEEESSCCTHHHHHHHHHHCTTTSCC
T ss_pred HHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHH-hC--CCCEEEECCCCCHhHHHHHHhhHHhCCCeE
Confidence 45677888887 877 567888 99999887653 2222 23 789999999999999888763333567777
Q ss_pred EEecc-----------ccccc-cC---CCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC--
Q 002263 172 VVSDL-----------KDIDY-KS---GDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-- 230 (946)
Q Consensus 172 ~~~~~-----------~~l~~-i~---~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~-- 230 (946)
+.++. +++++ +. ++++++++.+| |.+|.+.+ +++|+++|+++|+++++|.-...++.-.
T Consensus 174 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~ 253 (448)
T 3meb_A 174 KEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFE 253 (448)
T ss_dssp EEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHH
T ss_pred EEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcc
Confidence 77665 22333 33 45777778887 67998865 6669999999999999953112222111
Q ss_pred -CC---C---Cccce-EEEecc-ccccccCCCCCCceEEE--EE--------c-h----hhhhcCCCceEeEeecCCCCc
Q 002263 231 -PP---G---ELGAD-IVVGSA-QRFGVPMGYGGPHAAFL--AT--------S-Q----EYKRMMPGRIVGVSIDSSGKP 286 (946)
Q Consensus 231 -~~---~---~~GaD-i~v~s~-k~lg~P~~~GGP~~g~l--~~--------~-~----~~~~~lp~~~~G~s~d~~g~~ 286 (946)
+. . +.+.+ ++++|. |.|+.| |-.+|++ .+ . + ++.+.+
T Consensus 254 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l--------------- 314 (448)
T 3meb_A 254 ADAFAVRMFVDAGVEVLVAQSFSKNFGLY----GERIGCLHVVHAGVEGSVEKNKALSAAMVSGM--------------- 314 (448)
T ss_dssp HHTHHHHHHHHTTCCEEEEEECTTTSCCG----GGCCEEEEEECCCCSSSHHHHHHHHHHHHHHH---------------
T ss_pred cCchhHHHHhhcCCcEEEEecccccCCCc----cccceeeeeeeccccccccCCHHHHHHHHHHH---------------
Confidence 00 0 12344 456665 776532 2236787 44 3 3 222221
Q ss_pred ceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhC-------hhhHHHHHHHHHHHHHHHHHHHhcCCCEEE--
Q 002263 287 ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG-------PEGLKTIAQRVHGLAGTFALGLKKLGTVEV-- 357 (946)
Q Consensus 287 ~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g-------~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~-- 357 (946)
....| ..+++..+.. ..+..++ +.. .+.++++.++..++.++|.+.|+++| +.-
T Consensus 315 ----------~~~~~-~~~~~~~~~~-~~a~~~~----l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~ 377 (448)
T 3meb_A 315 ----------TLQIR-KTWSMSAIHG-AYIVQVI----VHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRK-TPGPG 377 (448)
T ss_dssp ----------HHHHH-TTTSSCCHHH-HHHHHHH----HTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCST
T ss_pred ----------HHHHh-cccCCccHHH-HHHHHHH----hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCcC
Confidence 00011 2333332111 1111111 111 13477888889999999999999885 321
Q ss_pred ----cC--CCCcCeEEEecCCHHHHHHHH-HHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 358 ----QG--LPFFDTVKVKCADAHAIASAA-YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 358 ----~~--~~~~~~~~i~~~~~~~v~~~L-~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+. .+...-+.+. .-..++...| .++||.+.. +..|+|+... +.++|++++++|.
T Consensus 378 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~ll~~~gV~v~~---G~gRis~a~~-~~~~i~~~~~~l~ 438 (448)
T 3meb_A 378 SKGTWDHILTAIGMFTFT-GLTPEHVDYLKEKWSIYLVK---AGGRMSMCGL-TESNCDYVAEAIH 438 (448)
T ss_dssp TTCCCTHHHHCCSSEEEC-CCCHHHHHHHHHHHCEEECS---GGGEEEGGGC-CTTTHHHHHHHHH
T ss_pred cccccceeCCCceEEEec-CCCHHHHHHHHHhCCEEEeC---CCcEEEEecC-CHHHHHHHHHHHH
Confidence 11 0111113321 1123445555 567998864 2249998654 4455999999886
No 439
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.24 E-value=2.2e-10 Score=131.92 Aligned_cols=278 Identities=13% Similarity=0.131 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcC-CCCHHHHHHHHHh---------hcCCCe
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIAS-NCHPQTIDICITR---------ADGFDI 169 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~-~~Hps~~~~~~~~---------a~~~gi 169 (946)
..++.+.+++++|.+..++.++++|+.++++++.+.+ .. ++++||+.+ ..|+.+...+... ....|+
T Consensus 87 ~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 164 (433)
T 1zod_A 87 VVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVT--GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGS 164 (433)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHH--TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTE
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhh--CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCc
Confidence 3456678999999877789999999988887765432 23 457888776 5666555443210 001255
Q ss_pred EEEEec------------------cccccc-cC----CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEe
Q 002263 170 KVVVSD------------------LKDIDY-KS----GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMAT 221 (946)
Q Consensus 170 ~v~~~~------------------~~~l~~-i~----~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a 221 (946)
..+.++ +++|++ ++ +++++|++... |.+|.+.+ +++|.++|+++|+++++|
T Consensus 165 ~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D- 243 (433)
T 1zod_A 165 FAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILD- 243 (433)
T ss_dssp EEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEE-
T ss_pred eEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEe-
Confidence 544332 345555 54 56777776432 56898776 999999999999999994
Q ss_pred cCcc-ccCCCCCC-----CccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccc
Q 002263 222 DLLA-LTILKPPG-----ELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 295 (946)
Q Consensus 222 ~~~a-l~~l~~~~-----~~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tr 295 (946)
+..+ ++...... ....|++.. +|.|+. |-.+|++++++++++.+.. +. +
T Consensus 244 Ev~~~~g~~g~~~~~~~~~~~~di~s~-sK~~~~-----G~~ig~~~~~~~~~~~~~~----------~~--~------- 298 (433)
T 1zod_A 244 EAQTGVGRTGTMFACQRDGVTPDILTL-SKTLGA-----GLPLAAIVTSAAIEERAHE----------LG--Y------- 298 (433)
T ss_dssp CTTTTTTTTSSSSTHHHHTCCCSEEEE-CHHHHT-----TSSCEEEEECHHHHHHHHH----------TT--C-------
T ss_pred ccccCCCcCchHhHHhhcCCCCCEEEe-cccccC-----CCCeeEEEEhHHHHHhhcc----------CC--C-------
Confidence 3333 43221111 123576533 488863 2347899999887765511 00 0
Q ss_pred cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEc-CCCCcCeEEEec
Q 002263 296 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQ-GLPFFDTVKVKC 370 (946)
Q Consensus 296 e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~-~~~~~~~~~i~~ 370 (946)
....|.+.. +.+..+..+++ ..+..++ +.++..++.++++++|+++ +.+... +...+-.+.+..
T Consensus 299 -----~~~~t~~~~-~~~~~a~~aal--~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~ 367 (433)
T 1zod_A 299 -----LFYTTHVSD-PLPAAVGLRVL--DVVQRDG---LVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVK 367 (433)
T ss_dssp -----CCCCTTTTC-HHHHHHHHHHH--HHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEE
T ss_pred -----CCCCCCCcC-HHHHHHHHHHH--HHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEec
Confidence 001222211 11222222332 2222222 4566667778888887763 212222 111121222221
Q ss_pred --------CC-HHHHHHHHHHcCCeeeeec--C--CeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 371 --------AD-AHAIASAAYKIEMNLRVVD--S--NTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 --------~~-~~~v~~~L~~~GI~~~~~~--~--~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.. +.++.+.|.++||.+.... . +.+|++++..+|++|+++++++|..
T Consensus 368 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~ 427 (433)
T 1zod_A 368 DRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ 427 (433)
T ss_dssp ETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 12 6789999999999886543 3 7899999999999999999999963
No 440
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.24 E-value=1.9e-10 Score=131.38 Aligned_cols=274 Identities=11% Similarity=0.043 Sum_probs=153.5
Q ss_pred HHHHHHHHHh-CCC-----CcceE--EcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 002263 103 NFQTMIADLT-GLP-----MSNAS--LLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 174 (946)
Q Consensus 103 e~q~~la~L~-g~~-----~~~~s--l~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~ 174 (946)
++++.+++++ |.. +.++. .+.+||++.+++..+++...++||+|+++...|+.+...++. .|.+++.+
T Consensus 83 ~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~ 158 (409)
T 4eu1_A 83 SFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAK----AGMELTPY 158 (409)
T ss_dssp HHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHH----TTCEEEEE
T ss_pred HHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHH----cCCeEEEE
Confidence 4567777765 665 44553 377888887766443332123789999999999998887653 58888877
Q ss_pred cc----------ccccc-c---CCCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCCC------
Q 002263 175 DL----------KDIDY-K---SGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK------ 230 (946)
Q Consensus 175 ~~----------~~l~~-i---~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l~------ 230 (946)
++ +++++ + .++++++++.+| |.+|.+.+ +++|+++|+++|+++++|.-...+..-.
T Consensus 159 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 238 (409)
T 4eu1_A 159 SYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAF 238 (409)
T ss_dssp CCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTH
T ss_pred EeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchH
Confidence 65 33444 4 235566666788 67998876 5669999999999999953111222110
Q ss_pred CC---CCccce-EEEecc-ccccccCCCCCCceEEE--EE-chhhhhcCCCceEeEeecCCCCcceEEeccccccccccc
Q 002263 231 PP---GELGAD-IVVGSA-QRFGVPMGYGGPHAAFL--AT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD 302 (946)
Q Consensus 231 ~~---~~~GaD-i~v~s~-k~lg~P~~~GGP~~g~l--~~-~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre 302 (946)
.. .+.+.+ ++++|. |.|+.| |-.+|++ .+ ++++.+.+-.++ ....+
T Consensus 239 ~~~~~~~~~~~~i~~~S~SK~~g~~----G~riG~~~~v~~~~~~~~~l~~~~---------------------~~~~~- 292 (409)
T 4eu1_A 239 VPRHLVDMVPNLIVAQSFSKNFGLY----GHRCGALHISTASAEEAKRLVSQL---------------------ALLIR- 292 (409)
T ss_dssp HHHHHHTTSSCCEEEEECTTTSSCG----GGCCEEEEEECSSHHHHHHHHHHH---------------------HHHHH-
T ss_pred HHHHHHhhCCcEEEEecCcccccCc----cCCceEEEEEeCCHHHHHHHHHHH---------------------HHHHh-
Confidence 00 011223 566676 877543 2236786 44 444222210000 00001
Q ss_pred ccCCCccchHHHHHHHHHHHHHHhC-----hhhHHHHHHHHHHHHHHHHHHHhcCCC---EEEcCCCCcCeEEEecCCHH
Q 002263 303 KATSNICTAQALLANMAAMYAVYHG-----PEGLKTIAQRVHGLAGTFALGLKKLGT---VEVQGLPFFDTVKVKCADAH 374 (946)
Q Consensus 303 ~aTsni~t~~~l~a~~aa~y~~~~g-----~~Gl~~i~~~~~~~a~~l~~~L~~~g~---~~~~~~~~~~~~~i~~~~~~ 374 (946)
..+++.. .....+..+++ .... .+.++++.++..++.+++.+.|+++|. +++.. +...-+.+ ..-..
T Consensus 293 ~~~~~~~-~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~-~~~~~ 367 (409)
T 4eu1_A 293 PMYNNPP-LYGAWVVSSIL--KDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIE-RQVGMMAY-TGLTR 367 (409)
T ss_dssp HHHSSCC-HHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH-HSCSSEEE-CCCCH
T ss_pred hhcCCCC-hHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceec-CCceEEEE-eCCCH
Confidence 1111111 11111111111 1100 234677888889999999999998751 22221 11111222 11123
Q ss_pred HHHHHHH-HcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 375 AIASAAY-KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 375 ~v~~~L~-~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
++.++|. ++||.+.. ..|+++... +++|+++++++|.
T Consensus 368 ~~~~~ll~~~gv~v~p----~~Ri~~~~~-~~~~i~~~~~~l~ 405 (409)
T 4eu1_A 368 EQVELLRSEYHIYMTL----NGRAAVSGL-NSTNVEYVSQAIH 405 (409)
T ss_dssp HHHHHHHHHHCEECCT----TCEEEGGGC-CTTTHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEcC----CCEEEEEec-CHhhHHHHHHHHH
Confidence 3455554 67998864 248888765 4566999999886
No 441
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.23 E-value=5.9e-10 Score=128.30 Aligned_cols=282 Identities=14% Similarity=0.122 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc---cc--CCCCEEEEcCCCCHHHHHHHHHhhcC---------
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI---QK--GKKKTFIIASNCHPQTIDICITRADG--------- 166 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~---~~--~~gd~vvv~~~~Hps~~~~~~~~a~~--------- 166 (946)
..++.+.++++++.+..++.+++||+.++++++.+.+. .+ .++++||+.+..|+............
T Consensus 74 ~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 153 (430)
T 3i4j_A 74 LEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTP 153 (430)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-----------------------
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCC
Confidence 34556789999988777899999999888877654431 01 14678888776554433221111100
Q ss_pred CCe--EEEEecc-----------ccccc-cC----CCEeEEEEEcC-C-Cceeecc----hHHHHHHHHhCCcEEEEEec
Q 002263 167 FDI--KVVVSDL-----------KDIDY-KS----GDVCGVLVQYP-G-TEGEVLD----YGDFIKNAHANGVKVVMATD 222 (946)
Q Consensus 167 ~gi--~v~~~~~-----------~~l~~-i~----~~t~~v~v~~p-n-~~G~i~d----i~~i~~~a~~~gal~~v~a~ 222 (946)
... .+..++. ++|++ +. +++++|++..+ + ..|.+.+ +++|.++|+++|+++++| +
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D-E 232 (430)
T 3i4j_A 154 LMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIAD-E 232 (430)
T ss_dssp --CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEE-C
T ss_pred cCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEe-c
Confidence 000 2223332 55665 53 45666666544 4 6777776 999999999999999995 3
Q ss_pred Ccc-ccCCCCC---CCc-c--ceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccc
Q 002263 223 LLA-LTILKPP---GEL-G--ADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 294 (946)
Q Consensus 223 ~~a-l~~l~~~---~~~-G--aDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~t 294 (946)
..+ ++..... ..+ | .|+++. +|.|+. | =-+|++.+++++++.+... .+.+
T Consensus 233 v~~~~~~~g~~~~~~~~~~~~~di~t~-sK~l~~-----G~~r~G~~~~~~~i~~~~~~~----------~~~~------ 290 (430)
T 3i4j_A 233 VMSGMGRCGSPLALSRWSGVTPDIAVL-GKGLAA-----GYAPLAGLLAAPQVYETVMGG----------SGAF------ 290 (430)
T ss_dssp TTTTTTTTSSSSGGGGTTTCCCSEEEE-CGGGTT-----TSSCCEEEEECHHHHHHHHHT----------TCBC------
T ss_pred hhhCCCcccchhhhhhhcCCCCcEEEE-cccccC-----CccccEEEEECHHHHHHHhcc----------CCcc------
Confidence 322 3211111 122 3 566654 488752 2 2367888898887765210 0000
Q ss_pred ccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCEEEcC-CCCcCeEEEe
Q 002263 295 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK----LGTVEVQG-LPFFDTVKVK 369 (946)
Q Consensus 295 re~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~----~g~~~~~~-~~~~~~~~i~ 369 (946)
....|.+.. +.+..+..+++ ..+.. +++.++..++.+++++.|++ ++++.... ...+-.+.+.
T Consensus 291 ------~~~~t~~~~-~~~~aaa~aal--~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 358 (430)
T 3i4j_A 291 ------MHGFTYAGH-PVSVAAGLSVL--DIVER---EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLG 358 (430)
T ss_dssp ------CCCCTTTTC-HHHHHHHHHHH--HHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC
T ss_pred ------cccCCCCCC-HHHHHHHHHHH--HHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEec
Confidence 011222211 11122222222 32222 23444555555666665554 32243331 1112112221
Q ss_pred c---------CC-HHHHHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 370 C---------AD-AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 370 ~---------~~-~~~v~~~L~~~GI~~~~~-------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
. +. +.++.+.|.++||.++.. .++.+|++++...|++++++++++|+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 423 (430)
T 3i4j_A 359 DLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAG 423 (430)
T ss_dssp ------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 11 467999999999988654 257899999999999999999999974
No 442
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.22 E-value=9.2e-10 Score=127.82 Aligned_cols=276 Identities=14% Similarity=0.122 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHH-HhccccCCCCEEEEcCC-CCHHHHHHHHHhhc------C---C-
Q 002263 101 LLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIASN-CHPQTIDICITRAD------G---F- 167 (946)
Q Consensus 101 l~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~l-a~~~~~~~gd~vvv~~~-~Hps~~~~~~~~a~------~---~- 167 (946)
..++.+.++++++.+ ...+.++++||.++++++. ++... ++++||+.+. -|..+...+..-.. . .
T Consensus 109 ~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~--g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 186 (453)
T 4ffc_A 109 YVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLAT--GRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFA 186 (453)
T ss_dssp HHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCC
T ss_pred HHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhc--CCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCC
Confidence 345667889999754 3578899999988887764 33223 4577887664 55444443321000 0 1
Q ss_pred -CeEEEEecc------------------ccccc-cCCCEeEEEEEcC--CCceeecc----hHHHHHHHHhCCcEEEEEe
Q 002263 168 -DIKVVVSDL------------------KDIDY-KSGDVCGVLVQYP--GTEGEVLD----YGDFIKNAHANGVKVVMAT 221 (946)
Q Consensus 168 -gi~v~~~~~------------------~~l~~-i~~~t~~v~v~~p--n~~G~i~d----i~~i~~~a~~~gal~~v~a 221 (946)
++....++. ++|++ +.+++.++++..| ++.|.+.+ +++|.++|+++|+++++|
T Consensus 187 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~D- 265 (453)
T 4ffc_A 187 PEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIAD- 265 (453)
T ss_dssp SSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEE-
T ss_pred CCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEe-
Confidence 333332221 22333 4444344444455 34677765 999999999999999995
Q ss_pred cCc-cccCCCCC---CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccc
Q 002263 222 DLL-ALTILKPP---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 295 (946)
Q Consensus 222 ~~~-al~~l~~~---~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tr 295 (946)
+.. .++..... ..+| .|+++. +|.|+. |-.+|++.+++++++.+....
T Consensus 266 Ev~~g~g~~g~~~a~~~~~~~pdi~t~-sK~~~~-----G~~~G~~~~~~~i~~~~~~~~-------------------- 319 (453)
T 4ffc_A 266 EVQTGFARTGAWFASEHEGIVPDIVTM-AKGIAG-----GMPLSAVTGRAELMDAVYAGG-------------------- 319 (453)
T ss_dssp CTTTTTTTTSSSSTHHHHTCCCSEEEE-CGGGGT-----TSSCEEEEEEHHHHTTSCTTS--------------------
T ss_pred cCccCCCcccccchhhhcCCCcchHhh-hhhhcC-----CcCeEEEEECHHHHhhhcccC--------------------
Confidence 332 23321111 1123 466654 488852 234678888988887662110
Q ss_pred cccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEc-CCCCcCeEEEec
Q 002263 296 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQ-GLPFFDTVKVKC 370 (946)
Q Consensus 296 e~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~-~~~~~~~~~i~~ 370 (946)
...|.+.. +.+..+..+++ ..+..+ ++.++..++.+++++.|+++ +.+..+ +...+-.+.+..
T Consensus 320 ------~~~t~~~~-~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 387 (453)
T 4ffc_A 320 ------LGGTYGGN-PVTCAAAVAAL--GVMREL---DLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVK 387 (453)
T ss_dssp ------SCCSSSSC-HHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBC
T ss_pred ------cCCCCCcC-HHHHHHHHHHH--HHhhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEec
Confidence 01122211 11111222222 322222 34455555666666666543 323222 111121222311
Q ss_pred -----CC---HHHHHHHHHHcCCeeeeec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 371 -----AD---AHAIASAAYKIEMNLRVVD--SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 -----~~---~~~v~~~L~~~GI~~~~~~--~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+. +.++.+.|.++||.+.... ++.+|++++..+|++|+++++++|..
T Consensus 388 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 444 (453)
T 4ffc_A 388 PGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSD 444 (453)
T ss_dssp TTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 22 6788999999999987643 47899999999999999999999974
No 443
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.22 E-value=9.1e-10 Score=127.61 Aligned_cols=283 Identities=11% Similarity=0.116 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccc---cC--CCCEEEEcCCCC-HHHHHHHHHhhc--------C
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ---KG--KKKTFIIASNCH-PQTIDICITRAD--------G 166 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~---~~--~gd~vvv~~~~H-ps~~~~~~~~a~--------~ 166 (946)
..++.+.++++++.+..++.++++||.++++++.+.+.. .+ ++++||+.+..+ ......+..-.. +
T Consensus 89 ~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 168 (448)
T 3dod_A 89 ATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGP 168 (448)
T ss_dssp HHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-------------------------
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccC
Confidence 345667889999766677889999999988876544321 11 268999887655 433322211000 0
Q ss_pred CCeEEEEec-------------------cccccc-cC---CCEeEEEEEcC--CCceeecc----hHHHHHHHHhCCcEE
Q 002263 167 FDIKVVVSD-------------------LKDIDY-KS---GDVCGVLVQYP--GTEGEVLD----YGDFIKNAHANGVKV 217 (946)
Q Consensus 167 ~gi~v~~~~-------------------~~~l~~-i~---~~t~~v~v~~p--n~~G~i~d----i~~i~~~a~~~gal~ 217 (946)
....+..++ +++|++ +. +++++|++..+ +..|.+.+ +++|.++|+++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~l 248 (448)
T 3dod_A 169 LMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLM 248 (448)
T ss_dssp ----CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEE
T ss_pred CCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEE
Confidence 011223332 344665 53 56777777654 56787765 999999999999999
Q ss_pred EEEecCcc-ccCCCCC---CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEe
Q 002263 218 VMATDLLA-LTILKPP---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 218 ~v~a~~~a-l~~l~~~---~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~ 291 (946)
++| +..+ ++..... ..+| .|+++. +|.|++ |--.+|++.+++++++.+..... . ... +
T Consensus 249 I~D-Ev~~g~g~~g~~~a~~~~~~~~di~t~-sK~l~~----G~~~ig~v~~~~~~~~~~~~~~~----~--~~~-~--- 312 (448)
T 3dod_A 249 IVD-EVATGFGRTGKMFACEHENVQPDLMAA-GKGITG----GYLPIAVTFATEDIYKAFYDDYE----N--LKT-F--- 312 (448)
T ss_dssp EEE-CTTTTTTTTSSSSGGGGGTCCCSEEEE-CGGGGT----TSSCCEEEEEEHHHHHTTCSCGG----G--CCC-C---
T ss_pred EEe-ccccCCCcccchhhhhhcCCCCCEEEe-cccccC----CcCceEEEEECHHHHHHhhhccc----c--CCc-c---
Confidence 995 3322 3321111 1223 566654 488852 21245788889988887632000 0 000 0
Q ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc---CCCEEEc-CCCCcCeEE
Q 002263 292 MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK---LGTVEVQ-GLPFFDTVK 367 (946)
Q Consensus 292 l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~---~g~~~~~-~~~~~~~~~ 367 (946)
....|.+. ++.+..+..+++ ..+..+ ++.++..++.+++++.|++ .+.+... +...+ +.
T Consensus 313 ---------~~~~t~~~-~~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~--~~ 375 (448)
T 3dod_A 313 ---------FHGHSYTG-NQLGCAVALENL--ALFESE---NIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFM--CG 375 (448)
T ss_dssp ---------CCCCTTTT-CHHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTE--EE
T ss_pred ---------cccCCCCc-CHHHHHHHHHHH--HHHhcc---cHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEE--EE
Confidence 01112111 111122222222 222222 3445555666666666654 3212211 11111 22
Q ss_pred EecCC--------------HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 368 VKCAD--------------AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 368 i~~~~--------------~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.+.. +.++.+.|.++||.+... ++.+|++++..+|++|+++++++|..
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-~~~iRi~~~~~~t~e~i~~~l~~l~~ 438 (448)
T 3dod_A 376 AELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL-GDVIAFLPPLASTAEELSEMVAIMKQ 438 (448)
T ss_dssp EEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE-TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc-CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 22221 368999999999998765 48999999999999999999999974
No 444
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.21 E-value=1e-09 Score=127.76 Aligned_cols=287 Identities=14% Similarity=0.052 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc-c--c--CCCCEEEEcC-CCCHHHHHHHHHhh--------c
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-Q--K--GKKKTFIIAS-NCHPQTIDICITRA--------D 165 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~-~--~--~~gd~vvv~~-~~Hps~~~~~~~~a--------~ 165 (946)
...++.+.++++++.+..++.++++|+.++++++.+.+. . + .++++||+.+ .-|..+...+..-. .
T Consensus 96 ~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 175 (460)
T 3gju_A 96 ASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFD 175 (460)
T ss_dssp HHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTT
T ss_pred HHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccC
Confidence 344566788999877777898999999998887654431 0 1 1467888766 55555444332100 0
Q ss_pred C--CCeEEEEec-------------------cccccc-cC----CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCC
Q 002263 166 G--FDIKVVVSD-------------------LKDIDY-KS----GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANG 214 (946)
Q Consensus 166 ~--~gi~v~~~~-------------------~~~l~~-i~----~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~g 214 (946)
. .++..+..+ +++|++ +. +++++|++..+ +..|.+.+ +++|.++|+++|
T Consensus 176 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~ 255 (460)
T 3gju_A 176 LPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYD 255 (460)
T ss_dssp CSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred CCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 1 133333222 245555 43 56777777654 45777665 999999999999
Q ss_pred cEEEEEecCcc-ccCCCCC---CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcce
Q 002263 215 VKVVMATDLLA-LTILKPP---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPAL 288 (946)
Q Consensus 215 al~~v~a~~~a-l~~l~~~---~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~ 288 (946)
+++++| +..+ ++..... ..+| .|+++. +|.+++ |+..+|++.+++++++.+.... +. ... +
T Consensus 256 ~llI~D-Ev~~g~gr~g~~~~~~~~~~~pdi~t~-sK~l~g----G~~~lg~v~~~~~i~~~~~~~~-----~~-~~~-~ 322 (460)
T 3gju_A 256 VLLVAD-EVVTGFGRLGTMFGSDHYGIKPDLITI-AKGLTS----AYAPLSGVIVADRVWQVLVQGS-----DK-LGS-L 322 (460)
T ss_dssp CEEEEE-CTTTTTTTTSSSCHHHHHTCCCSEEEE-CGGGTT----TSSCCEEEEEEHHHHHHHHHHH-----HH-HCS-C
T ss_pred CEEEEe-ccccCCCcccccchHhhcCCCCCeeee-ehhhcC----CCCCeEEEEECHHHHHHHhccc-----cc-ccc-c
Confidence 999995 3322 3322111 1123 466654 488742 3244678888988877651000 00 000 0
Q ss_pred EEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH----hcCCCEEEc-CCCCc
Q 002263 289 RVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL----KKLGTVEVQ-GLPFF 363 (946)
Q Consensus 289 ~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L----~~~g~~~~~-~~~~~ 363 (946)
....|.+.. +.+..+..+++ ..+..++ +.++..++.++++++| ++.+.+..+ +...+
T Consensus 323 ------------~~~~t~~~~-~~~~aaa~aal--~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~ 384 (460)
T 3gju_A 323 ------------GHGWTYSAH-PICVAAGVANL--ELIDEMD---LVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGML 384 (460)
T ss_dssp ------------SCCCTTTTC-HHHHHHHHHHH--HHHHHTT---HHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTE
T ss_pred ------------ccCCCCCCC-HHHHHHHHHHH--HHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEE
Confidence 011122211 11222222232 3222222 3344444445555544 444323222 11111
Q ss_pred CeEEEecC-----------C-HHHHHHHHHHcCCeeeeec-CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 364 DTVKVKCA-----------D-AHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 364 ~~~~i~~~-----------~-~~~v~~~L~~~GI~~~~~~-~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
-.+.+..+ . +.++.+.|.++||.++... .+.+|++++...|++|+++++++|..
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 451 (460)
T 3gju_A 385 AAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTAD 451 (460)
T ss_dssp EEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 11222110 1 5678999999999887653 48999999999999999999999974
No 445
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.21 E-value=2.3e-10 Score=133.74 Aligned_cols=285 Identities=14% Similarity=0.146 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-c--cc--CCCCEEEEcC-CCCHHHHHHHHHhhc--------
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-I--QK--GKKKTFIIAS-NCHPQTIDICITRAD-------- 165 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~--~~--~~gd~vvv~~-~~Hps~~~~~~~~a~-------- 165 (946)
...++.+.++++++.+...+.++++||.++++++.+.+ . .+ .++++||+.+ .-|..+...+..-..
T Consensus 98 ~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~ 177 (476)
T 3i5t_A 98 PAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFD 177 (476)
T ss_dssp HHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSC
T ss_pred HHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccC
Confidence 34456678999997666678899999999888765433 2 11 1466777655 556555444321000
Q ss_pred --CCCeEEEEec-----------------cccccc-cC----CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcE
Q 002263 166 --GFDIKVVVSD-----------------LKDIDY-KS----GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVK 216 (946)
Q Consensus 166 --~~gi~v~~~~-----------------~~~l~~-i~----~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal 216 (946)
..++.....+ +++|++ +. +++++|++..+ +..|.+.+ +++|.++|+++|++
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gil 257 (476)
T 3i5t_A 178 IAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDIL 257 (476)
T ss_dssp CCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCE
T ss_pred CCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1133333221 345665 43 56777777655 56777665 99999999999999
Q ss_pred EEEEecCc-cccCCCCC---C-Ccc--ceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcce
Q 002263 217 VVMATDLL-ALTILKPP---G-ELG--ADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPAL 288 (946)
Q Consensus 217 ~~v~a~~~-al~~l~~~---~-~~G--aDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~ 288 (946)
+++| +.. .++-.... . .+| .|+++. +|.|+ || -.+|++.+++++.+.+...- ...+.|
T Consensus 258 lI~D-Ev~~g~gr~G~~~~~~~~~~v~pdi~t~-sK~l~-----~G~~plg~v~~~~~i~~~~~~~~-------~~~~~~ 323 (476)
T 3i5t_A 258 YISD-EVVTGFGRCGEWFASEKVFGVVPDIITF-AKGVT-----SGYVPLGGLAISEAVLARISGEN-------AKGSWF 323 (476)
T ss_dssp EEEE-CTTTTTTTTSSSCHHHHTTCCCCSEEEE-CGGGG-----TTSSCCEEEEECHHHHHTTSGGG-------CTTCEE
T ss_pred EEEE-ecccCCccccCceeeecccCCCcchhhh-hhhhc-----CCCcCeEEEEECHHHHHHHhcCC-------cccccc
Confidence 9994 332 23322111 1 233 477654 48875 23 34678888999887763210 000000
Q ss_pred EEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEc-CCCCcC
Q 002263 289 RVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQ-GLPFFD 364 (946)
Q Consensus 289 ~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~-~~~~~~ 364 (946)
....|.+. .+.+..+..+++ ..+.. +++.++..++.+++++.|++++ .+..+ +...+-
T Consensus 324 ------------~~~~t~~~-np~a~aAa~aaL--~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~ 385 (476)
T 3i5t_A 324 ------------TNGYTYSN-QPVACAAALANI--ELMER---EGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVG 385 (476)
T ss_dssp ------------CCCCTTTT-CHHHHHHHHHHH--HHHHH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEE
T ss_pred ------------cccCCCCc-CHHHHHHHHHHH--HHHHh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCcee
Confidence 00122221 111222222222 32222 3456677788888888888653 12221 111111
Q ss_pred eEEEecCC------------HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 365 TVKVKCAD------------AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 365 ~~~i~~~~------------~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+.... +.++.+.|.++||.++... +.+|+++....|++|+++++++|..
T Consensus 386 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~l~~t~e~i~~~l~~l~~ 449 (476)
T 3i5t_A 386 CVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-DLCVISPPLIISRAQIDEMVAIMRQ 449 (476)
T ss_dssp EEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 12221110 4578889999999988754 8999999999999999999999974
No 446
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.84 E-value=1.3e-12 Score=148.58 Aligned_cols=272 Identities=11% Similarity=0.066 Sum_probs=165.8
Q ss_pred HHHHHHHHH----hC--CCCcceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEec-
Q 002263 103 NFQTMIADL----TG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD- 175 (946)
Q Consensus 103 e~q~~la~L----~g--~~~~~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~- 175 (946)
++++.++++ .| .++.++.+++|+|.++++++.++. . +||+|+++...|+.+...++ ..|.+++.++
T Consensus 70 ~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~--~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~ 142 (392)
T 3b1d_A 70 ELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT-K--EGEAVLINSPVYPPFARSVR----LNNRKLVSNSL 142 (392)
Confidence 344555554 45 455678888999988777665542 2 78999999999988877654 3455555443
Q ss_pred ----------cccccc-cC-CCEeEEEEEcC-CCceeecc---hHHHHHHHHhCCcEEEEEecCccccCC-----CCC--
Q 002263 176 ----------LKDIDY-KS-GDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KPP-- 232 (946)
Q Consensus 176 ----------~~~l~~-i~-~~t~~v~v~~p-n~~G~i~d---i~~i~~~a~~~gal~~v~a~~~al~~l-----~~~-- 232 (946)
++++++ +. +++++|++.+| |.+|.+.+ +++|.++|+++|++++++. ..+.... .+.
T Consensus 143 ~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De-~~~~~~~~g~~~~~~~~ 221 (392)
T 3b1d_A 143 KEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDE-IHQDLTLFGHEHVSFNT 221 (392)
Confidence 345555 55 67888888888 67898864 9999999999999999942 2221110 011
Q ss_pred -C-C-ccceEEEecc-ccccccCCCCCCceEEEEEchh-hhhcCCCceEeEeecCCCCcceEEecccccccccccccCCC
Q 002263 233 -G-E-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 307 (946)
Q Consensus 233 -~-~-~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsn 307 (946)
. + .+.++++.|. |.|+. +|..+|++.++++ +++.+.... + ...
T Consensus 222 ~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~-------------------------~---~~~ 269 (392)
T 3b1d_A 222 VSPDFKDFALVLSSATKTFNI----AGTKNSYAIIENPTLCAQFKHQQ-------------------------L---VNN 269 (392)
Confidence 1 1 4556788887 88753 3445788887643 655441100 0 000
Q ss_pred ccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCC--CCcCeEEEecC--CHHHHHHHHH-
Q 002263 308 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL--PFFDTVKVKCA--DAHAIASAAY- 381 (946)
Q Consensus 308 i~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~-~g~~~~~~~--~~~~~~~i~~~--~~~~v~~~L~- 381 (946)
+++.+.+ +..++..+...+.+.++++.++..++.+++.+.|++ ++++++... .++-.+.+... ...++.++|.
T Consensus 270 ~~~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~ 348 (392)
T 3b1d_A 270 HHEVSSL-GYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHD 348 (392)
Confidence 1111111 111111111123455778888888889999999987 522766532 11111222211 1567888886
Q ss_pred HcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 382 KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 382 ~~GI~~~~~------~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++||.+... .++.+|++++. ++++|++.++.|..
T Consensus 349 ~~gi~v~~g~~f~~~~~~~iRi~~~~--~~e~i~~~l~~l~~ 388 (392)
T 3b1d_A 349 QAKVILNRGSDYGSEGELHARLNIAA--PKSLVEEICKRIVC 388 (392)
Confidence 789987542 24679999775 57889998888864
No 447
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.19 E-value=1.1e-09 Score=127.10 Aligned_cols=283 Identities=11% Similarity=0.117 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-c-ccC---CCCEEEEcCCC-CHHHHHHHHHhh--------c
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-I-QKG---KKKTFIIASNC-HPQTIDICITRA--------D 165 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~-~~~---~gd~vvv~~~~-Hps~~~~~~~~a--------~ 165 (946)
...++.+.++++++.+.. +.++++||.++++++.+.+ + ... ++++||+.+.. |......+..-. .
T Consensus 92 ~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 170 (452)
T 3n5m_A 92 PAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYE 170 (452)
T ss_dssp HHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTC
T ss_pred HHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccC
Confidence 344566788999987766 8888999988888765443 1 012 56888877754 444333321100 0
Q ss_pred CCCeEEEEec--------------------cccccc-cC----CCEeEEEEEcC--CCceeecc----hHHHHHHHHhCC
Q 002263 166 GFDIKVVVSD--------------------LKDIDY-KS----GDVCGVLVQYP--GTEGEVLD----YGDFIKNAHANG 214 (946)
Q Consensus 166 ~~gi~v~~~~--------------------~~~l~~-i~----~~t~~v~v~~p--n~~G~i~d----i~~i~~~a~~~g 214 (946)
+....+..++ +++|++ +. +++++|++..+ | +|.+.+ +++|.++|+++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~ 249 (452)
T 3n5m_A 171 PFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHG 249 (452)
T ss_dssp CCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHT
T ss_pred CCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcC
Confidence 1111233333 355665 54 57888888776 7 998876 999999999999
Q ss_pred cEEEEEecCc-cccCCCC---CCCcc--ceEEEeccccccccCCCCC-CceEEEEEchhhhhcCCCceEeEeecCCCCcc
Q 002263 215 VKVVMATDLL-ALTILKP---PGELG--ADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 287 (946)
Q Consensus 215 al~~v~a~~~-al~~l~~---~~~~G--aDi~v~s~k~lg~P~~~GG-P~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~ 287 (946)
+++++| +.. .++.... ...+| .|+++. +|.|+ || -.+|++.+++++.+.+... ...+.
T Consensus 250 ~llI~D-Ev~~g~g~~g~~~~~~~~~~~~di~t~-sK~l~-----~G~~~ig~~~~~~~i~~~~~~~-------~~~~~- 314 (452)
T 3n5m_A 250 ALLISD-EVICGFGRTGKAFGFMNYDVKPDIITM-AKGIT-----SAYLPLSATAVKREIYEAFKGK-------GEYEF- 314 (452)
T ss_dssp CEEEEE-CTTTTTTTTSSSSGGGGTTCCCSEEEE-CGGGG-----TTSSCCEEEEEEHHHHGGGCSS-------STTCS-
T ss_pred CEEEEe-cchhCCCcccccchhhhcCCCCCEEee-ccccc-----CCCcceEEEEECHHHHHHHhhc-------cCCCC-
Confidence 999995 332 2322111 11233 566653 48875 24 3578899999988776210 00000
Q ss_pred eEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEc-CCCC
Q 002263 288 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQ-GLPF 362 (946)
Q Consensus 288 ~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~-~~~~ 362 (946)
+ ....|.+.. +.+..+..+++ ..+..+ ++.++..++.+++++.|+++ +.+..+ +...
T Consensus 315 ~------------~~~~t~~~~-~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 376 (452)
T 3n5m_A 315 F------------RHINTFGGN-PAACALALKNL--EIIENE---NLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGL 376 (452)
T ss_dssp C------------CCCCSSTTC-HHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSS
T ss_pred c------------cccCCCCCC-HHHHHHHHHHH--HHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEE
Confidence 0 011222221 11122222222 322222 34455566666777766543 223222 1111
Q ss_pred cCeEEEe-cC-------C--HHHHHHHHHHcCCeeeeec------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 363 FDTVKVK-CA-------D--AHAIASAAYKIEMNLRVVD------SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 363 ~~~~~i~-~~-------~--~~~v~~~L~~~GI~~~~~~------~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+-.+.+. .. . ..++.+.|.++||.++... ++.+|++++..+|++|+++++++|..
T Consensus 377 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 447 (452)
T 3n5m_A 377 LVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKT 447 (452)
T ss_dssp CEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 2122221 11 1 3578899999999987654 58899999999999999999999863
No 448
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.18 E-value=5.6e-11 Score=138.35 Aligned_cols=269 Identities=14% Similarity=0.086 Sum_probs=155.5
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhccccCC-----C----CEEEEcCCCCHHH-HHHHHHhhcCCCeEE
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK-----K----KTFIIASNCHPQT-IDICITRADGFDIKV 171 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~~~~~-----g----d~vvv~~~~Hps~-~~~~~~~a~~~gi~v 171 (946)
.++++.+|+++|.+ ++.++++||.+.++++.+++ . + | |+|+++ ..|..+ ...+.. .|..+
T Consensus 77 ~~l~~~la~~~~~~--~v~~t~~gt~A~~~al~~~~-~--~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~----~~~~~ 146 (467)
T 2oqx_A 77 YALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLI-K--KREQEKGLDRSKMVAFS-NYFFDTTQGHSQI----NGCTV 146 (467)
T ss_dssp HHHHHHHHHHHCCS--EEEEEC--CCSHHHHHHHHH-H--HHHHHHCCCTTTCEEEE-SSCCHHHHHHHHH----TTCEE
T ss_pred HHHHHHHHHHhCcC--cEEEcCCcHHHHHHHHHHHh-c--cccccCCCCccceEEec-ccccccchhhhhc----cCcce
Confidence 45678999999975 58888999988777765543 2 3 5 888877 577433 333322 12222
Q ss_pred EE------------------eccccccc-cC----CCEeEEEEEcC-CCc-eee---cchHHHHHHHHhCCcEEEEEecC
Q 002263 172 VV------------------SDLKDIDY-KS----GDVCGVLVQYP-GTE-GEV---LDYGDFIKNAHANGVKVVMATDL 223 (946)
Q Consensus 172 ~~------------------~~~~~l~~-i~----~~t~~v~v~~p-n~~-G~i---~di~~i~~~a~~~gal~~v~a~~ 223 (946)
.. +|+++|++ ++ ++|++|++.+| |.+ |.+ +++++|.++|+++|+++++|+ .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~-a 225 (467)
T 2oqx_A 147 RNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDS-A 225 (467)
T ss_dssp EECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEEC-T
T ss_pred eeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEc-h
Confidence 21 23345665 54 47999999988 455 765 468999999999999999953 1
Q ss_pred ccc-----------cCCC-CCCC------ccceEEEecc-ccccccCCCCCCceEEEEEchh-hhhc---CCCce-EeEe
Q 002263 224 LAL-----------TILK-PPGE------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRM---MPGRI-VGVS 279 (946)
Q Consensus 224 ~al-----------~~l~-~~~~------~GaDi~v~s~-k~lg~P~~~GGP~~g~l~~~~~-~~~~---lp~~~-~G~s 279 (946)
.++ +... +... .++|+++.+. |.++.|. .|+++++++ +++. +.... .+
T Consensus 226 ~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~------Gg~~~~~~~~~~~~~~~~~~~~~~~-- 297 (467)
T 2oqx_A 226 RFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPM------GGLLCMKDDSFFDVYTECRTLCVVQ-- 297 (467)
T ss_dssp THHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSS------CEEEEECSGGGHHHHHHHHHHHHHT--
T ss_pred hhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCC------ceEEEecChhHHHHHHHHHHhhhcc--
Confidence 122 1111 1222 2488888887 7776442 267777765 3332 21000 00
Q ss_pred ecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC
Q 002263 280 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG 359 (946)
Q Consensus 280 ~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~ 359 (946)
.+. ...++.+ ..++.++..++ ..++.. +..++..++++++++.|+++| +++.
T Consensus 298 ---~~~---------------~~~~~~~---~~~~~al~~~l-~~~~~~----~~~~~~~~~~~~l~~~L~~~~-~~~~- 349 (467)
T 2oqx_A 298 ---EGF---------------PTYGGLE---GGAMERLAVGL-YDGMNL----DWLAYRIAQVQYLVDGLEEIG-VVCQ- 349 (467)
T ss_dssp ---TSS---------------CCCCCCC---HHHHHHHHHHH-HHTTCH----HHHHHHHHHHHHHHHHHHHTT-CCEE-
T ss_pred ---CCc---------------ccccchh---hhHHHHHHHhh-HhhhhH----HHHHHHHHHHHHHHHHHHHCC-Ceee-
Confidence 000 0111111 11221211111 111111 222344677889999998886 6655
Q ss_pred CCCcCeEEEec----CC-------HHHHHHHH-HHcCCeeeeec-----------------CCeEEEEeccC-CCHHHHH
Q 002263 360 LPFFDTVKVKC----AD-------AHAIASAA-YKIEMNLRVVD-----------------SNTVTASFDET-TTLEDVD 409 (946)
Q Consensus 360 ~~~~~~~~i~~----~~-------~~~v~~~L-~~~GI~~~~~~-----------------~~~lris~~~~-~t~edid 409 (946)
+.....+.+.+ ++ +.++.++| .++||.+.... .+.+|++++.. +|++||+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~ 429 (467)
T 2oqx_A 350 QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMD 429 (467)
T ss_dssp EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHH
T ss_pred cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHH
Confidence 22122233433 11 34568888 88899875421 26899999998 9999999
Q ss_pred HHHHHHhC
Q 002263 410 KLFIVFAG 417 (946)
Q Consensus 410 ~ll~~l~~ 417 (946)
+++++|..
T Consensus 430 ~~~~~l~~ 437 (467)
T 2oqx_A 430 FIIEAFKH 437 (467)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999974
No 449
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.16 E-value=9.3e-10 Score=128.00 Aligned_cols=281 Identities=12% Similarity=0.112 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhcc-c--c--CCCCEEEEcCC-CCHHHHHHHHHhhc--------C
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-Q--K--GKKKTFIIASN-CHPQTIDICITRAD--------G 166 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~~-~--~--~~gd~vvv~~~-~Hps~~~~~~~~a~--------~ 166 (946)
..++.+.++++++.+..++.++++||.++++++.+.+. . + .++++||+.+. -|.........-.. .
T Consensus 96 ~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 175 (459)
T 4a6r_A 96 VVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDL 175 (459)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CC
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCC
Confidence 34566789999987777899999999998887654432 0 1 14678887664 55444333221000 0
Q ss_pred --CCeEEEEec------------------cccccc-cC----CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcE
Q 002263 167 --FDIKVVVSD------------------LKDIDY-KS----GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVK 216 (946)
Q Consensus 167 --~gi~v~~~~------------------~~~l~~-i~----~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal 216 (946)
.++..+.++ +++|++ +. +++++|++..+ +..|.+.+ +++|.++|+++|++
T Consensus 176 ~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 255 (459)
T 4a6r_A 176 PIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVL 255 (459)
T ss_dssp SCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCE
T ss_pred CCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 133333221 345655 43 45666666543 56777776 99999999999999
Q ss_pred EEEEecCc-cccCCCCC---CCc--cceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEE
Q 002263 217 VVMATDLL-ALTILKPP---GEL--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 290 (946)
Q Consensus 217 ~~v~a~~~-al~~l~~~---~~~--GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l 290 (946)
+++| +.. .++..... ..+ ..|+++. +|.+++ ||-.+|++.+++++.+.+... .. +
T Consensus 256 lI~D-Ev~~g~gr~G~~~~~~~~~~~pdi~t~-sK~l~g----g~~~lg~v~~~~~i~~~~~~~----------~~-~-- 316 (459)
T 4a6r_A 256 LVAD-EVICGFGRTGEWFGHQHFGFQPDLFTA-AKGLSS----GYLPIGAVFVGKRVAEGLIAG----------GD-F-- 316 (459)
T ss_dssp EEEE-CTTTTTTTTSSSSHHHHHTCCCSEEEE-CGGGGT----TSSCCEEEEECHHHHHHHHHH----------CT-T--
T ss_pred EEEe-ccccCCCcccccchHhhcCCCCCeeeh-hhhhcC----CCCCccceeeCHHHHHHhhcC----------CC-c--
Confidence 9995 332 23222111 112 3577654 387742 334568888898887765200 00 0
Q ss_pred ecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHH-HHHHHHHHHH----hcCCCEEEcC-CCCcC
Q 002263 291 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH-GLAGTFALGL----KKLGTVEVQG-LPFFD 364 (946)
Q Consensus 291 ~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~-~~a~~l~~~L----~~~g~~~~~~-~~~~~ 364 (946)
....|.+.. +-+..+..+++ ..+..++ +.++.. ++.+++++.| ++.+.+..+. ...+-
T Consensus 317 ----------~~~~t~~~~-~~~~aaa~aal--~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~ 380 (459)
T 4a6r_A 317 ----------NHGFTYSGH-PVCAAVAHANV--AALRDEG---IVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQ 380 (459)
T ss_dssp ----------HHHHHHCSC-HHHHHHHHHHH--HHHHHTC---HHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEE
T ss_pred ----------ccCCCCCCC-HHHHHHHHHHH--HHHhcch---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEE
Confidence 001111110 11111222222 3222222 334444 4555555555 3333232221 11111
Q ss_pred eEEEecC----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 365 TVKVKCA----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 365 ~~~i~~~----------~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+.+..+ . +.++.+.|.++||.++... +.+|++++...|++|+++++++|..
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~~~~~~t~e~i~~~l~~l~~ 444 (459)
T 4a6r_A 381 AFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAEVDEMLAVAER 444 (459)
T ss_dssp EEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 1222110 1 5678999999999988754 8999999999999999999999974
No 450
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.16 E-value=1e-10 Score=132.88 Aligned_cols=273 Identities=11% Similarity=0.032 Sum_probs=162.0
Q ss_pred HHHHHHHHHHh---C---CCCcceEE--cccHHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 002263 102 LNFQTMIADLT---G---LPMSNASL--LDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 172 (946)
Q Consensus 102 ~e~q~~la~L~---g---~~~~~~sl--~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~ 172 (946)
.++++.+|+++ + .++.++.+ +.|||.+++.++.++. +. +||+|+++...|+.+...++. .|.+++
T Consensus 72 ~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~----~g~~~~ 145 (396)
T 2q7w_A 72 PEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNT--SVKRVWVSNPSWPNHKSVFNS----AGLEVR 145 (396)
T ss_dssp HHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHS--CCCEEEEEESCCTHHHHHHHH----TTCEEE
T ss_pred HHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHH----cCCceE
Confidence 34667788877 2 23567777 8999988887764433 23 789999999999998877643 577777
Q ss_pred Eecc----------ccccc-cCC---CEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccCC-----
Q 002263 173 VSDL----------KDIDY-KSG---DVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL----- 229 (946)
Q Consensus 173 ~~~~----------~~l~~-i~~---~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~l----- 229 (946)
.++. +++++ +++ +++++++.+| |.+|.+. ++++|+++|+++|+++++|.-...+..-
T Consensus 146 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 225 (396)
T 2q7w_A 146 EYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDA 225 (396)
T ss_dssp EEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHT
T ss_pred EEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchh
Confidence 7665 23444 443 4777888888 6799885 5678999999999999994311111110
Q ss_pred CCCC---Ccc-ceEEEecc-ccccccCCCCCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEecccccccccc
Q 002263 230 KPPG---ELG-ADIVVGSA-QRFGVPMGYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 301 (946)
Q Consensus 230 ~~~~---~~G-aDi~v~s~-k~lg~P~~~GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr 301 (946)
.+.. ..+ -+++++|. |.|+.| |-.+|++++ +++.++.+-.. + ....+
T Consensus 226 ~~~~~~~~~~~~~i~~~s~sK~~~~~----G~riG~~~~~~~~~~~~~~~~~~-------------~--------~~~~~ 280 (396)
T 2q7w_A 226 EGLRAFAAMHKELIVASSYSXNFGLY----NERVGACTLVAADSETVDRAFSQ-------------M--------KAAIR 280 (396)
T ss_dssp HHHHHHHHHCSCEEEEEECTTTTTCG----GGCCEEEEEECSSHHHHHHHHHH-------------H--------HHHHH
T ss_pred HHHHHHHhcCCcEEEEEecccccccc----ccccceEEEEcCCHHHHHHHHHH-------------H--------HHHHh
Confidence 0011 122 35677776 766422 222688886 45332222000 0 00001
Q ss_pred cccCCCccchHHHHHHHHHHHHHH-----hChhhHHHHHHHHHHHHHHHHHHHhcCC---CEEEcCCCCcCeEE-EecCC
Q 002263 302 DKATSNICTAQALLANMAAMYAVY-----HGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLPFFDTVK-VKCAD 372 (946)
Q Consensus 302 e~aTsni~t~~~l~a~~aa~y~~~-----~g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~~~~~-i~~~~ 372 (946)
.+.+.++.....+..+++ .. .-.+.++++.++..++.+++.+.|+++| ++++... ...-+. +..+
T Consensus 281 --~~~~~~~~~~~~a~~~~l--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~- 354 (396)
T 2q7w_A 281 --ANYSNPPAHGASVVATIL--SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIK-QNGMFSFSGLT- 354 (396)
T ss_dssp --TTTSSCCHHHHHHHHHHH--TSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHH-CCSSEEECCCC-
T ss_pred --hccCCCCcHHHHHHHHHh--cChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecC-CCceEEEecCC-
Confidence 111111112222222221 10 0024677788888899999999999876 2433211 111122 2222
Q ss_pred HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 373 AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 373 ~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
...+.+.|.++||.+.. .+|+|++.. |++|+++++++|+
T Consensus 355 ~~~~~~~l~~~gv~v~~----~~Ris~~~~-~~e~i~~~~~~l~ 393 (396)
T 2q7w_A 355 KEQVLRLREEFGVYAVA----SGRVNVAGM-TPDNMAPLCEAIV 393 (396)
T ss_dssp HHHHHHHHHHHCEECCT----TCEEEGGGC-CTTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCeeecC----CceEEEeec-CHHHHHHHHHHHH
Confidence 55677777788998864 379999854 8999999999885
No 451
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.16 E-value=1.9e-09 Score=125.77 Aligned_cols=280 Identities=11% Similarity=0.101 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cc--c--CCCCEEEEcC-CCCHHHHHHHHHhhc---------
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQ--K--GKKKTFIIAS-NCHPQTIDICITRAD--------- 165 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~--~--~~gd~vvv~~-~~Hps~~~~~~~~a~--------- 165 (946)
..++.+.++++++.+..++.++++|+.++++++.+.+ +. + .++++||+.+ .-|..+...+..-..
T Consensus 101 ~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~ 180 (472)
T 3hmu_A 101 AIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGL 180 (472)
T ss_dssp HHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCC
Confidence 3456678899998766789899999999888765443 21 1 1467777655 556544443321000
Q ss_pred CCCeEEEEec------------------cccccc-cC----CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEE
Q 002263 166 GFDIKVVVSD------------------LKDIDY-KS----GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKV 217 (946)
Q Consensus 166 ~~gi~v~~~~------------------~~~l~~-i~----~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~ 217 (946)
..++..+..+ +++|++ +. +++++|++..+ +..|.+.+ +++|.++|+++|+++
T Consensus 181 ~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gill 260 (472)
T 3hmu_A 181 IPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILL 260 (472)
T ss_dssp CSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEE
T ss_pred CCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 0133333221 344555 43 46777777654 56788877 999999999999999
Q ss_pred EEEecCc-cccCCCCCC---Ccc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEe
Q 002263 218 VMATDLL-ALTILKPPG---ELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA 291 (946)
Q Consensus 218 ~v~a~~~-al~~l~~~~---~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~ 291 (946)
++| +.. .++-..... .+| .|+++. +|.++ .||-.+|++.+++++++.+..+. +
T Consensus 261 I~D-Ev~~gfgr~G~~~a~~~~~v~pdi~t~-sK~l~----gg~~plG~v~~~~~i~~~~~~~~------------~--- 319 (472)
T 3hmu_A 261 IAD-EVICGFGRTGNWFGTQTMGIRPHIMTI-AKGLS----SGYAPIGGSIVCDEVAHVIGKDE------------F--- 319 (472)
T ss_dssp EEE-CTTTTTTTTSSSCHHHHHTCCCSEEEE-CGGGT----TTSSCCEEEEEEHHHHHHHTTSC------------B---
T ss_pred EEE-ccccCCcccCccchhHHhCCCCceeee-chhhh----cCCcceEEEEECHHHHHhcccCC------------c---
Confidence 995 332 233221111 122 577754 38774 24334678888988887662110 0
Q ss_pred cccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHH-HHHHHHHHHHhcCC---CEEEc-CCCCcCeE
Q 002263 292 MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH-GLAGTFALGLKKLG---TVEVQ-GLPFFDTV 366 (946)
Q Consensus 292 l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~-~~a~~l~~~L~~~g---~~~~~-~~~~~~~~ 366 (946)
....|.+.. +.+..+..+++ ..+..+ ++.++.. ++.++++++|+++. .+..+ +...+-.+
T Consensus 320 ---------~~~~t~~~n-p~a~aAa~aaL--~~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i 384 (472)
T 3hmu_A 320 ---------NHGYTYSGH-PVAAAVALENL--RILEEE---NILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASI 384 (472)
T ss_dssp ---------CCCCTTTTC-HHHHHHHHHHH--HHHHHT---THHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEE
T ss_pred ---------cccCCCCCC-HHHHHHHHHHH--HHHHHh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEE
Confidence 001121111 11222222232 332222 3456666 77788888887652 12221 11111112
Q ss_pred EEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 367 KVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 367 ~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.+..+ . +.++.+.|.++||.++... +.+|++++...|++|+++++++|..
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~~~~t~e~i~~~l~~l~~ 447 (472)
T 3hmu_A 385 ALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-DRMIISPPLVITPAEIDEMFVRIRK 447 (472)
T ss_dssp EECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 22111 2 5678899999999988754 8999999999999999999999974
No 452
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.15 E-value=7.3e-09 Score=120.15 Aligned_cols=275 Identities=14% Similarity=0.103 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHhCCC-CcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCC-CCHHHHHHHHHhhc---------CCC
Q 002263 101 LLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASN-CHPQTIDICITRAD---------GFD 168 (946)
Q Consensus 101 l~e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~-~Hps~~~~~~~~a~---------~~g 168 (946)
..++.+.++++++.+ ...+.++++||.++++++.+.+ .. .+++||+.+. -|..+...+..-.. ...
T Consensus 106 ~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~--g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~ 183 (451)
T 3oks_A 106 YVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHT--HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFA 183 (451)
T ss_dssp HHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCC
T ss_pred HHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhc--CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCC
Confidence 345667889998754 3568899999988888764332 23 4577887665 45444333321000 011
Q ss_pred eEEEEeccc------------------cc-------cc-cC-CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcE
Q 002263 169 IKVVVSDLK------------------DI-------DY-KS-GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVK 216 (946)
Q Consensus 169 i~v~~~~~~------------------~l-------~~-i~-~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal 216 (946)
..+..++.. ++ ++ ++ +++++|++... +..|.+.+ +++|.++|+++|++
T Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~ 263 (451)
T 3oks_A 184 PEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVV 263 (451)
T ss_dssp SSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCE
T ss_pred CCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCE
Confidence 133333321 12 12 23 34555555433 45677766 99999999999999
Q ss_pred EEEEecCc-cccCCCC---CCCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEE
Q 002263 217 VVMATDLL-ALTILKP---PGELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 290 (946)
Q Consensus 217 ~~v~a~~~-al~~l~~---~~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l 290 (946)
+++| +.. .++.... ...+| .|+++. +|.|+. |-.+|++.+++++++.+....
T Consensus 264 lI~D-Ev~~g~g~~g~~~~~~~~~~~pdi~t~-sK~l~~-----G~~iG~v~~~~~~~~~~~~~~--------------- 321 (451)
T 3oks_A 264 FIAD-EVQTGFARTGAMFACEHEGIDPDLIVT-AKGIAG-----GLPLSAVTGRAEIMDSPHVSG--------------- 321 (451)
T ss_dssp EEEE-CTTTTTTTTSSSSGGGGGTCCCSEEEE-CGGGGT-----TSSCEEEEEEHHHHTCSCTTS---------------
T ss_pred EEEE-ecccCCCccccchhhhhcCCCCCeeee-hhhhhC-----CcceEEEEECHHHHhhhcCCC---------------
Confidence 9994 332 2322111 11223 577643 488853 334678888988887662110
Q ss_pred ecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEc-CCCCcCe
Q 002263 291 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQ-GLPFFDT 365 (946)
Q Consensus 291 ~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~-~~~~~~~ 365 (946)
...|.+.. +.+..+..+++ ..+..+ ++.++..++.+++++.|+++ +.+..+ +...+-.
T Consensus 322 -----------~~~t~~~~-~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~ 384 (451)
T 3oks_A 322 -----------LGGTYGGN-PIACAAALATI--ETIESE---GLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIA 384 (451)
T ss_dssp -----------BCCSSSSC-HHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEE
T ss_pred -----------cCCCCCCC-HHHHHHHHHHH--HHHhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEE
Confidence 01121111 11111222222 322222 34555566666676666553 213222 1111212
Q ss_pred EEEec-----CC---HHHHHHHHHHcCCeeeeec--CCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 366 VKVKC-----AD---AHAIASAAYKIEMNLRVVD--SNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 366 ~~i~~-----~~---~~~v~~~L~~~GI~~~~~~--~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.+.. +. +.++.+.|.++||.+.... .+.+|++++..+|++|+++++++|.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~ 445 (451)
T 3oks_A 385 MELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLE 445 (451)
T ss_dssp EEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 32311 22 5689999999999887643 3789999999999999999999986
No 453
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.15 E-value=3.6e-09 Score=122.68 Aligned_cols=272 Identities=11% Similarity=0.071 Sum_probs=148.9
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCCCCH-HHHHHHHHh------hcCCCeE---
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHP-QTIDICITR------ADGFDIK--- 170 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~Hp-s~~~~~~~~------a~~~gi~--- 170 (946)
.++.+.++++++ ...++.++++||.++++++.+.+ +. ++++||+.+..|+ .+...+... ....|+.
T Consensus 100 ~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~ar~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~ 176 (453)
T 2cy8_A 100 VRWAERIVAAFP-SIRKLRFTGSGTETTLLALRVARAFT--GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPET 176 (453)
T ss_dssp HHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHHHHHHH--CCCEEEEECC----------------------------C
T ss_pred HHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHHHHHhh--CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccc
Confidence 344566777775 55678899999988887765422 23 4567777775444 332221100 0012332
Q ss_pred ---EEEe---ccccccc-cC---CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCccccC-CCCCC-
Q 002263 171 ---VVVS---DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTI-LKPPG- 233 (946)
Q Consensus 171 ---v~~~---~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~al~~-l~~~~- 233 (946)
+..+ |+++|++ +. +++++|++... +.+|.+.+ +++|.++|+++|+++++| +..+ +. .....
T Consensus 177 ~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~D-Ev~~-g~~~g~~~~ 254 (453)
T 2cy8_A 177 TANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILD-EVIS-GFRVGNHGM 254 (453)
T ss_dssp GGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEE-CTTT-TTTTCTTHH
T ss_pred cCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-cCcc-ccccCchhh
Confidence 3333 3456665 54 46777776543 44898887 999999999999999994 3333 22 11111
Q ss_pred --Cc--cceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCcc
Q 002263 234 --EL--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 309 (946)
Q Consensus 234 --~~--GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~ 309 (946)
.+ ..|++.. +|.|++ |..+|++++++++++.+.....+ + + ....|.+..
T Consensus 255 ~~~~~~~~di~s~-sK~l~~-----G~~~G~v~~~~~~~~~l~~~~~~--------~-~------------~~~~t~~~n 307 (453)
T 2cy8_A 255 QALLDVQPDLTCL-AKASAG-----GLPGGILGGREDVMGVLSRGSDR--------K-V------------LHQGTFTGN 307 (453)
T ss_dssp HHHHTCCCSEEEE-EGGGGT-----TSSCEEEEECHHHHTTSSSCC------------------------------CCCC
T ss_pred hHHhCCCCcEEEE-ChhhhC-----CcceEEEechHHHHHHhccccCC--------C-c------------eeCCCCCCC
Confidence 12 3587632 388852 33478999999888776321000 0 0 001121111
Q ss_pred chHHHHHHHHHHHHHH-hChhhHHHHHHHHHHHHHHHHHHHhcC----CCEE--EcCCCCcCeEEEec-----C------
Q 002263 310 TAQALLANMAAMYAVY-HGPEGLKTIAQRVHGLAGTFALGLKKL----GTVE--VQGLPFFDTVKVKC-----A------ 371 (946)
Q Consensus 310 t~~~l~a~~aa~y~~~-~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~--~~~~~~~~~~~i~~-----~------ 371 (946)
+....+..+++ .. + . +++.+++.++.++++++|+++ + +. +.+...+-.+.+.. .
T Consensus 308 -~~~~aa~~aal--~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 379 (453)
T 2cy8_A 308 -PITAAAAIAAI--DTIL-E---DDVCAKINDLGQFAREAMNHLFARKG-LNWLAYGRFSGFHLMPGLPPNTTDTGSITR 379 (453)
T ss_dssp -HHHHHHHHHHH--HHHH-H---TTHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECCTTEEEEEETSCTTCCCCHHHHT
T ss_pred -HHHHHHHHHHH--HHHh-h---hhHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEeeeEEEEEEeccccccccccccc
Confidence 11222222332 33 3 3 335567777788888888764 4 31 22221121222321 1
Q ss_pred ------C---HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 372 ------D---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 372 ------~---~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ ..++.+.|.++||.++. .+.++ +...++++|+++++++|..
T Consensus 380 ~~~~~~~~~~~~~l~~~l~~~Gv~v~~--~~~~~--l~~~~t~~~i~~~l~~l~~ 430 (453)
T 2cy8_A 380 AEVARPDVKMIAAMRMALILEGVDIGG--RGSVF--LSAQHEREHVEHLVTTFDR 430 (453)
T ss_dssp TCSCCCCHHHHHHHHHHHHHTTEECBT--TTEEE--CCTTCCHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHCCeEEeC--CCCEE--eeccCCHHHHHHHHHHHHH
Confidence 1 46789999999999853 24444 5678999999999999974
No 454
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.12 E-value=6.4e-10 Score=128.21 Aligned_cols=272 Identities=12% Similarity=0.148 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCCC-CHHHHHHHH-------Hh--hcCCCe
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNC-HPQTIDICI-------TR--ADGFDI 169 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~-Hps~~~~~~-------~~--a~~~gi 169 (946)
..++++.++++++ ...++.++++||.++++++.+.+ +. ++++||+.+.. |..+...+. .+ ....|+
T Consensus 98 ~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~ar~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~ 174 (434)
T 2epj_A 98 EVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRLARGYT--GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGV 174 (434)
T ss_dssp HHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEEETCCCCSSGGGSEECC------CEESSTTC
T ss_pred HHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhh--CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCC
Confidence 4456788899984 34568899999988887765422 33 56777776654 432221110 00 001232
Q ss_pred ------EEEEe---ccccccc-cC---CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCccccC-CC
Q 002263 170 ------KVVVS---DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTI-LK 230 (946)
Q Consensus 170 ------~v~~~---~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~al~~-l~ 230 (946)
.+..+ |+++|++ +. +++++|++... +.+|.+.| +++|.++|+++|+++++|. ..+ +. ..
T Consensus 175 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DE-v~~-g~~~g 252 (434)
T 2epj_A 175 PEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDE-VVT-GFRLG 252 (434)
T ss_dssp CHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEE-TTT-TTTSS
T ss_pred CCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEc-chh-ceeCC
Confidence 23333 4456665 54 46777776543 45899888 9999999999999999943 323 21 11
Q ss_pred CCC---C--ccceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccC
Q 002263 231 PPG---E--LGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 305 (946)
Q Consensus 231 ~~~---~--~GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aT 305 (946)
... . ...|++.. +|.|++ |-.+|++++++++++.+... + + + ...+|
T Consensus 253 ~~~~~~~~~~~~di~s~-sK~l~~-----G~~~G~v~~~~~~~~~l~~~---------~-~-~------------~~~~t 303 (434)
T 2epj_A 253 LEGAQGYFNIEGDIIVL-GKIIGG-----GFPVGAVAGSREVMSLLTPQ---------G-K-V------------FNAGT 303 (434)
T ss_dssp TTHHHHHHTCCCSEEEE-EGGGGT-----TSSCEEEEECHHHHTTBTTT---------S-S-B------------CCCCT
T ss_pred cchhhHHhCCCCCeeee-cchhcC-----CcceeeeeecHHHHHhhccC---------C-C-c------------ccCCC
Confidence 111 1 23687533 388852 22368899998887765210 0 0 0 00122
Q ss_pred CCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEE--EcCCCCcCeEEEecCC-------
Q 002263 306 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVE--VQGLPFFDTVKVKCAD------- 372 (946)
Q Consensus 306 sni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~--~~~~~~~~~~~i~~~~------- 372 (946)
.+.. +....+..+++ ..+.. +++.++..++.++++++|+++ + +. +.+...+ +.+.+++
T Consensus 304 ~~~~-~~~~aa~~a~l--~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~--~~i~~~~~~~~~~~ 374 (434)
T 2epj_A 304 FNAH-PITMAAGLATL--KALEE---EPVYSVSREAAKALEEAASEVLDRTG-LPYTINRVESM--MQLFIGVEEVSNAA 374 (434)
T ss_dssp TTTC-HHHHHHHHHHH--HHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEETTE--EEEEETCSCCSSHH
T ss_pred CCcC-HHHHHHHHHHH--HHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEeeeE--EEEEEeCCCcccch
Confidence 1111 11222222332 33222 235567777888888888764 4 32 1111112 2333221
Q ss_pred ---------HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 373 ---------AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 ---------~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
..++.+.|.++||.+.......+ ++...+|++|+++++++|..
T Consensus 375 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~--~~~~~~t~e~i~~~l~~l~~ 426 (434)
T 2epj_A 375 QARKADKKFYVKLHEEMLRRGVFIAPSNLEAV--FTGLPHQGEALEIAVEGLRS 426 (434)
T ss_dssp HHTTSCHHHHHHHHHHHHHTTEECCSSTTSCE--ECCTTCSHHHHHHHHHHHHH
T ss_pred hccccCHHHHHHHHHHHHHCCeEEeccCCCcE--EEeccCCHHHHHHHHHHHHH
Confidence 46789999999999876433344 45578899999999999974
No 455
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.12 E-value=1.5e-09 Score=124.24 Aligned_cols=264 Identities=12% Similarity=0.089 Sum_probs=154.7
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHcCCEE-EEEcCC--CCCCCCHHHHHHHHHhcCCCeEEEEEeCC-Ccccccc--cCHHH
Q 002263 566 HHRNVCIIPVSAHGTNPATAAMCGMKI-VSVGTD--AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDE 639 (946)
Q Consensus 566 ~~~~~Ili~~saHg~~~~~a~~~G~~v-v~v~~~--~~g~~D~e~L~~~i~~~~~~t~~vvvt~P-n~~G~~~--~~i~~ 639 (946)
.++++|++|++.++.+....+.+|++. ...+.. .+..+|.+.+.+.+++..++++.++..+| |.+|..- +.+++
T Consensus 135 ~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~ 214 (420)
T 4h51_A 135 AETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNE 214 (420)
T ss_dssp TTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHH
T ss_pred CCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHH
Confidence 367899999999888888899999974 444442 23678999999999876678888888888 6899884 36899
Q ss_pred HHHHHHHcCCEEEEeccccc-ccccccC-C------CccCCC-EEEeCCCcccccCCCCCCCcceeEEEecccCCCCCCC
Q 002263 640 ICKIIHDNGGQVYMDGANMN-AQVGLTS-P------GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH 710 (946)
Q Consensus 640 I~~ia~~~g~ll~vD~a~~~-a~~gl~~-p------g~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp~~ 710 (946)
|+++|++++++++.|.++.. ..++... + .+.+.. +++.|+.|+|+++ |.++|++.+......... .
T Consensus 215 i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~----G~RvG~~~~~~~~~~~~~-~ 289 (420)
T 4h51_A 215 IASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLY----SERAGTLSLLLKDKTKRA-D 289 (420)
T ss_dssp HHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCG----GGCEEEEEEECSCHHHHH-H
T ss_pred HHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccc----cCceEEEEecccCHHHHH-H
Confidence 99999999999999987521 1111100 0 012222 4556788988654 799999987654322110 0
Q ss_pred ccccCCCCCCCCCCCCCCCcccCccchhhHHHHHH--HHHHHHcHhhHHHHHHHHHHHHHHHHHHHhcc-CCeee---cc
Q 002263 711 PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY--TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILF---RG 784 (946)
Q Consensus 711 ~v~~~~d~~~~~~~~~~~~i~~~~~g~~~~~~~a~--a~l~~lG~eGl~~~~~~~~~~a~~l~~~L~~~-~~v~~---~~ 784 (946)
....... .. + ...+ +.+.+|+...+ ... ..+...-.+-++.+.++...+++.|.+.|++. ....+ ..
T Consensus 290 ~~~~l~~-~~--r-~~~s--~~p~~~a~~~~-~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~ 362 (420)
T 4h51_A 290 VKSVMDS-LI--R-EEYT--CPPAHGARLAH-LILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVIN 362 (420)
T ss_dssp HHHHHHH-HH--H-TTTS--SCCHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH
T ss_pred HHHHHHH-hh--h-cccC--cchHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecC
Confidence 0000000 00 0 0001 11111111110 000 00111112234455566667788888888774 11111 11
Q ss_pred CCCceeeeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 002263 785 VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 862 (946)
Q Consensus 785 ~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~~eid~~~~aL~~i~~e~~~ 862 (946)
..|. |.+ .|.+.+. .++|.++||++. | .+ ||++.- .+++.|++++++|.++++++.+
T Consensus 363 q~Gm----F~~--------~gls~e~-v~~L~e~~Vy~~----~-~g--Ris~Ag-l~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 363 QIGM----FSF--------LGLSKAQ-CEYCQNHNIFIT----V-SG--RANMAG-LTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp CCSS----EEE--------CCCCHHH-HHHHHHTTEECC----T-TC--EEEGGG-CCHHHHHHHHHHHHHHHC----
T ss_pred CCce----EEe--------cCcCHHH-HHHHHhCCEEEc----C-CC--EEEecc-CCHHHHHHHHHHHHHHHHHhhc
Confidence 1232 222 1455544 578999998753 1 12 888864 4688999999999999887754
No 456
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.12 E-value=7.5e-10 Score=127.60 Aligned_cols=272 Identities=14% Similarity=0.185 Sum_probs=155.0
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCCCC-HHHHHHHHHhh---------cCCCe-
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCH-PQTIDICITRA---------DGFDI- 169 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~~H-ps~~~~~~~~a---------~~~gi- 169 (946)
.++.+.++++++ +..++.++++||.++++++.+.+ .. ++++||+.+..| ..+...+.... ...++
T Consensus 98 ~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~~a~~~~--~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~ 174 (434)
T 3l44_A 98 VKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIRVARAYT--GRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVP 174 (434)
T ss_dssp HHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCC
T ss_pred HHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHHHHHHhh--CCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCC
Confidence 345678889887 56678899999988887765433 22 568888876544 33322210000 00111
Q ss_pred -----EEEEe---ccccccc-cC---CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCcc-ccCCCC
Q 002263 170 -----KVVVS---DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP 231 (946)
Q Consensus 170 -----~v~~~---~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~a-l~~l~~ 231 (946)
.+..+ |+++|++ +. +++++|++..+ ++.|.+.+ +++|.++|+++|+++++|. ..+ + ....
T Consensus 175 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DE-v~~g~-~~g~ 252 (434)
T 3l44_A 175 QSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDE-VITAF-RFMY 252 (434)
T ss_dssp HHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEEC-TTTTT-TSSS
T ss_pred CcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEec-cccce-eccc
Confidence 23334 3455655 53 56777777654 46788887 9999999999999999942 221 1 1111
Q ss_pred C---CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 232 P---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 232 ~---~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
. ..+| .|+++. +|.|+ ||-.+|++.+++++++.+... .+ + ...+|.
T Consensus 253 ~~~~~~~~~~~di~t~-sK~~~-----~G~~iG~~~~~~~i~~~~~~~----------~~-~------------~~~~t~ 303 (434)
T 3l44_A 253 GGAQDLLGVTPDLTAL-GKVIG-----GGLPIGAYGGKKEIMEQVAPL----------GP-A------------YQAGTM 303 (434)
T ss_dssp SCHHHHHTCCCSEEEE-EGGGG-----TTSSCEEEEECHHHHTTBTTT----------SS-B------------CCCCTT
T ss_pred cHHHHHcCCCCCeeeh-hhhhc-----CCcCeeeEEEcHHHHHhhccC----------CC-c------------ccCCCC
Confidence 1 1122 465543 48885 234578888898887765210 00 0 011222
Q ss_pred CccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCE-EEcCCCCcCeEEEec-----------
Q 002263 307 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTV-EVQGLPFFDTVKVKC----------- 370 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~-~~~~~~~~~~~~i~~----------- 370 (946)
+.. +.+..+..+++ ..+.. +++.++..++.+++++.|+++ +.+ .+.+... -+.+.+
T Consensus 304 ~~~-~~a~aaa~aal--~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~ 375 (434)
T 3l44_A 304 AGN-PASMASGIACL--EVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKG--ALTVYFTTNTIEDYDAA 375 (434)
T ss_dssp TTC-HHHHHHHHHHH--HHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETT--EEEEEESSSCCCSHHHH
T ss_pred CcC-HHHHHHHHHHH--HHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeecc--EEEEEEecCcccchhhc
Confidence 221 11122222222 33322 344556666677777777653 311 1111111 122322
Q ss_pred --CC---HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 371 --AD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 --~~---~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++ +.++.+.|.++||.++....+.+|++ ..+|++|+++++++|..
T Consensus 376 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl~--~~~t~e~i~~~l~~l~~ 425 (434)
T 3l44_A 376 QDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFLT--TEHTKEDIEYTIEAVGR 425 (434)
T ss_dssp HHSCHHHHHHHHHHHHHTTEECCSSTTCCEECC--TTCCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHCCeEEeecCCCcEEEe--cccCHHHHHHHHHHHHH
Confidence 12 36788999999999887555678874 57899999999999974
No 457
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.11 E-value=1.3e-09 Score=125.30 Aligned_cols=273 Identities=13% Similarity=0.150 Sum_probs=153.3
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHH-HhccccCCCCEEEEcC-CCCHHHHHHH-------HHh--hcCCCe-
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIAS-NCHPQTIDIC-------ITR--ADGFDI- 169 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~l-a~~~~~~~gd~vvv~~-~~Hps~~~~~-------~~~--a~~~gi- 169 (946)
.++.+.++++++ +..++.++++||.++++++. +.... ++++||+.+ .-|..+...+ ... ....|+
T Consensus 95 ~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~~a~~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (427)
T 3fq8_A 95 NVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRIMRAYT--GRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVP 171 (427)
T ss_dssp HHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSC
T ss_pred HHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhh--CCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCC
Confidence 355678889887 56678899999988887763 33233 457777655 4443222111 000 001111
Q ss_pred -----EEEEe---ccccccc-cC---CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCccccC-CCC
Q 002263 170 -----KVVVS---DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTI-LKP 231 (946)
Q Consensus 170 -----~v~~~---~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~al~~-l~~ 231 (946)
.+..+ |+++|++ +. +++++|++..+ +..|.+.+ +++|.++|+++|+++++| +..+ +. ...
T Consensus 172 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D-Ev~~-g~~~g~ 249 (427)
T 3fq8_A 172 KKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFD-EVIT-GFRIAY 249 (427)
T ss_dssp HHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEE-CTTT-BTTTBT
T ss_pred CcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-cccc-ccccCc
Confidence 12333 4456665 43 36888877655 56888988 999999999999999994 3332 21 000
Q ss_pred ---CCCc--cceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 232 ---PGEL--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 232 ---~~~~--GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
...+ ..|+.+.| |.|+. |=.+|++.+++++++.+... +. + ...+|.
T Consensus 250 ~~~~~~~~~~~di~t~s-K~~~~-----G~~~G~~~~~~~~~~~~~~~----------~~-~------------~~~~t~ 300 (427)
T 3fq8_A 250 GGVQEKFGVTPDLTTLG-KIIGG-----GLPVGAYGGKREIMQLVAPA----------GP-M------------YQAGTL 300 (427)
T ss_dssp THHHHHTTCCCSEEEEC-GGGGT-----TSSCEEEEECHHHHTTBTTT----------SS-B------------CCCCTT
T ss_pred chhhHhcCCCCChhhhh-hhhhC-----CcceEEEEEcHHHHHhhccC----------CC-c------------cccCCC
Confidence 0112 34765444 98862 22368888999888766310 00 0 011222
Q ss_pred CccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCCCcCeEEEecC-----------
Q 002263 307 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFFDTVKVKCA----------- 371 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~~~~~i~~~----------- 371 (946)
+. ++.+..+..+++ ..+..+ ++.++..++.+++++.|+++ + +.........-+.+.+.
T Consensus 301 ~~-~~~~~aa~~aal--~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 373 (427)
T 3fq8_A 301 SG-NPLAMTAGIKTL--ELLRQP---GTYEYLDQITKRLSDGLLAIAQETG-HAACGGQVSGMFGFFFTEGPVHNYEDAK 373 (427)
T ss_dssp TT-CHHHHHHHHHHH--HHHTST---THHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSCCCCSHHHHT
T ss_pred Cc-CHHHHHHHHHHH--HHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeeeEEEEEEecCccccccccc
Confidence 21 111222222222 333333 34556666677777777653 2 11000000011222221
Q ss_pred --C---HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 372 --D---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 372 --~---~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+ ..++.+.|.++||.++..... |+++...+|++|+++++++|..
T Consensus 374 ~~~~~~~~~l~~~l~~~Gi~v~~~~~~--r~~~~~~~t~e~i~~~l~~l~~ 422 (427)
T 3fq8_A 374 KSDLQKFSRFHRGMLEQGIYLAPSQFE--AGFTSLAHTEEDIDATLAAART 422 (427)
T ss_dssp TSCHHHHHHHHHHHHHTTEECCSSTTS--CEECCTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHCCcEEecCCCC--CEEeeCcCCHHHHHHHHHHHHH
Confidence 1 357899999999988764322 6667788999999999999863
No 458
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.11 E-value=1.8e-09 Score=124.37 Aligned_cols=268 Identities=12% Similarity=0.037 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHhC------CCCcceEEcccHHHHHHHHHHHhc-------cccCCCCEEEEcCCCCHHHHHHHHHhhcCC
Q 002263 101 LLNFQTMIADLTG------LPMSNASLLDEGTAAAEAMAMCNN-------IQKGKKKTFIIASNCHPQTIDICITRADGF 167 (946)
Q Consensus 101 l~e~q~~la~L~g------~~~~~~sl~~~~Ta~~ea~~la~~-------~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~ 167 (946)
..++++.+|++++ .++.++.++.|+|.++..++.++. .. +||+|+++.-.|+.+...++..
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~---- 175 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDA--PESKVVAHAPFYPVFREQTKYF---- 175 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTS--CCEEEEECSSCCHHHHHHHHHS----
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCC--CCCEEEEeCCCcccHHHHHHHc----
Confidence 3456778888876 567789999999988888777662 23 7899999999999988887642
Q ss_pred CeEEE--Eeccccccc-cCCCEeEEEEEcC-CCceeecchHHHHHHHHhCCcEEEEEecCccccCCCCCC--CccceEEE
Q 002263 168 DIKVV--VSDLKDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG--ELGADIVV 241 (946)
Q Consensus 168 gi~v~--~~~~~~l~~-i~~~t~~v~v~~p-n~~G~i~di~~i~~~a~~~gal~~v~a~~~al~~l~~~~--~~GaDi~v 241 (946)
|.+++ .+|+++|++ +++++++|++++| |.+|.+.+ + + ++ +...+++ ++.. ....+.. ..+.||++
T Consensus 176 g~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d-~~~~-~~~~s~~~~~~~~~i~~ 246 (427)
T 2hox_A 176 DKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYD-MVYY-WPHYTPIKYKADEDILL 246 (427)
T ss_dssp CBTTEEEEEEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEE-CTTC-STTTSCCCSCBCCSEEE
T ss_pred CCeeeeecCCHHHHHHhhcCCceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEe-eccc-CCCCCccccCCCceEEE
Confidence 33332 356678877 7778899999998 67999988 3 2 33 4555553 2211 1011111 15789999
Q ss_pred ecc-ccccccCCCCCCceEEEEEc-hhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHH
Q 002263 242 GSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 319 (946)
Q Consensus 242 ~s~-k~lg~P~~~GGP~~g~l~~~-~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~a 319 (946)
+|. |.|+.| |--+|+++++ +++++++.. + +...+.+..+ ....+..+
T Consensus 247 ~S~SK~~g~~----G~RiG~~~~~~~~l~~~l~~--------------~------------~~~~~~~~~~-~~q~a~~~ 295 (427)
T 2hox_A 247 FTMSKFTGHS----GSRFGWALIKDESVYNNLLN--------------Y------------MTKNTEGTPR-ETQLRSLK 295 (427)
T ss_dssp EEHHHHTSCG----GGCCEEEEECCHHHHHHHHH--------------H------------HHHHTSSCCH-HHHHHHHH
T ss_pred EeChhcCCCC----CceEEEEEECCHHHHHHHHH--------------H------------HHhcCCCCCH-HHHHHHHH
Confidence 997 877533 2237999994 677665410 0 0011112211 11112222
Q ss_pred HHH--HHHh------ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEE--cC-C----------CC-cCeEEEecCC-HHHH
Q 002263 320 AMY--AVYH------GPEGLKTIAQRVHGLAGTFALGLKKLGTVEV--QG-L----------PF-FDTVKVKCAD-AHAI 376 (946)
Q Consensus 320 a~y--~~~~------g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~--~~-~----------~~-~~~~~i~~~~-~~~v 376 (946)
++- ..++ ..+=+++..++..++.++|.+.|+++.++++ +. . +. ..-+.++++. ..++
T Consensus 296 ~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~ 375 (427)
T 2hox_A 296 VLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKD 375 (427)
T ss_dssp HHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCS
T ss_pred HhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcHHHH
Confidence 220 1111 1223456677788889999999999833876 21 1 00 1113345543 4556
Q ss_pred HHHHH-HcCCeeeee-----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 377 ASAAY-KIEMNLRVV-----DSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 377 ~~~L~-~~GI~~~~~-----~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
.++|. ++||.++.- .++.+|+|+. ++++++++.++.|.
T Consensus 376 ~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~--~~~e~l~~~l~~l~ 419 (427)
T 2hox_A 376 CYQTFQNGRINTQNGVGFEASSRYVRLSLI--KTQDDFDQLMYYLK 419 (427)
T ss_dssp HHHHHHHTTEECEEGGGGTSCTTEEEEECS--SCHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEcCCCccCCCCCEEEEEec--CCHHHHHHHHHHHH
Confidence 67664 789988642 2578999998 48889999988886
No 459
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.10 E-value=2.1e-09 Score=123.68 Aligned_cols=275 Identities=12% Similarity=0.125 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcC-CCCHHHHHHHHHh---------hcCCCe
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIAS-NCHPQTIDICITR---------ADGFDI 169 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~-~~Hps~~~~~~~~---------a~~~gi 169 (946)
..++.+.++++++ ....+.++++||.++++++.+.+ .. ++++||+.+ ..|..+...+... ....++
T Consensus 95 ~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~~a~~~~--~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 171 (429)
T 4e77_A 95 EVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIRLARGYT--GRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGV 171 (429)
T ss_dssp HHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEETTCCCC------------------CCCTTS
T ss_pred HHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHHHHHHhh--CCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCC
Confidence 3456678889887 56678899999988887764322 23 456777655 5565554322100 001111
Q ss_pred ------EEEEe---ccccccc-cC---CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCcc-c--cC
Q 002263 170 ------KVVVS---DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-L--TI 228 (946)
Q Consensus 170 ------~v~~~---~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~a-l--~~ 228 (946)
.+..+ |+++|++ +. +++++|++... +..|.+.+ +++|.++|+++|+++++|. ..+ + +.
T Consensus 172 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DE-v~~g~r~g~ 250 (429)
T 4e77_A 172 PTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDE-VMTGFRVAL 250 (429)
T ss_dssp CGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEE-TTTBTTTBT
T ss_pred CCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec-cccCcccCc
Confidence 22333 3455665 43 56777776543 45688887 9999999999999999943 222 1 11
Q ss_pred CCCCCCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 229 LKPPGELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 229 l~~~~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
......+| .|+++. +|.|+ ||-.+|++.+++++++.+... ... ...+|.
T Consensus 251 ~~~~~~~~~~pdi~t~-sK~~~-----~G~~~G~~~~~~~~~~~l~~~----------~~~-------------~~~~t~ 301 (429)
T 4e77_A 251 AGAQDYYHVIPDLTCL-GKIIG-----GGMPVGAFGGRREVMNALAPT----------GPV-------------YQAGTL 301 (429)
T ss_dssp TCHHHHTTCCCSEEEE-EGGGG-----TTSCCEEEEECHHHHTTBTTT----------SSB-------------CC--CC
T ss_pred chHHHhcCCCCCeeee-ccccc-----CCCCeEEEEECHHHHHHhccC----------CCc-------------cccCCC
Confidence 11011233 477533 48885 233468889999888766311 000 011222
Q ss_pred CccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCCCcCeEEEecCC----------
Q 002263 307 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFFDTVKVKCAD---------- 372 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~~~~~i~~~~---------- 372 (946)
+.. +.+..+..+++ ..+..+ ++.++..++.+++++.|+++ + +.........-+.+.+.+
T Consensus 302 ~~~-~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 374 (429)
T 4e77_A 302 SGN-PIAMAAGFACL--TEISQV---GVYETLTELTDSLATGLRHAAKEEN-IPLVVNHVGGMFGLFFTNADTVTCYQDV 374 (429)
T ss_dssp CCC-HHHHHHHHHHH--HHHTST---THHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEECCSSSCCCSHHHH
T ss_pred CCC-HHHHHHHHHHH--HHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEeeeEEEEEEccCccccccccc
Confidence 211 11222223332 333332 34555666667777776653 3 211000001112222211
Q ss_pred -------HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 373 -------AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 -------~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.++.+.|.++||.++......++ +...+|++|+++++++|..
T Consensus 375 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~~~~~t~e~i~~~l~~l~~ 424 (429)
T 4e77_A 375 MNCDVERFKRFFHLMLEEGVYLAPSAFEAGF--MSLAHSNEDIQKTVNAARR 424 (429)
T ss_dssp HTSCHHHHHHHHHHHHHTTEECCSSTTSCEE--CCTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHCCeEEeecCCCCEE--EeccCCHHHHHHHHHHHHH
Confidence 378999999999998765444444 5678899999999999863
No 460
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.07 E-value=1.8e-09 Score=121.24 Aligned_cols=285 Identities=12% Similarity=0.095 Sum_probs=167.4
Q ss_pred HHHHHHHHhCCCCc----ceEEcccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHH--------HHHHh-----hcC
Q 002263 104 FQTMIADLTGLPMS----NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTID--------ICITR-----ADG 166 (946)
Q Consensus 104 ~q~~la~L~g~~~~----~~sl~~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~--------~~~~~-----a~~ 166 (946)
+++...+|+|++.+ |+--. +|+.|..++.+|+. + +||+|+.-+..|..-+. .+... .-.
T Consensus 105 a~~rak~lF~a~~A~w~VNVQP~-SGs~AN~avy~All-~--PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~ 180 (490)
T 3ou5_A 105 CQRRALEAFDLDPAQWGVNVQPY-SGSPANLAVYTALL-Q--PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMP 180 (490)
T ss_dssp HHHHHHHHTTCCTTTEEEECCCS-SHHHHHHHHHHHHC-C---CCCEECBC----------------------------C
T ss_pred HHHHHHHHhCCCccccCCCCCcC-CHHHHHHHHHHHHc-C--CCCEEEecccCCCCcccccccCCCcccccccccccccc
Confidence 45678899999987 55444 55667777777763 3 89999977766532211 11000 001
Q ss_pred CCeEEE--Eeccccccc--cCCCEeEEEEEcCCCceeecchHHHHHHHHhCCcEEEEE-ecCc---cccCCCCCCCccce
Q 002263 167 FDIKVV--VSDLKDIDY--KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLL---ALTILKPPGELGAD 238 (946)
Q Consensus 167 ~gi~v~--~~~~~~l~~--i~~~t~~v~v~~pn~~G~i~di~~i~~~a~~~gal~~v~-a~~~---al~~l~~~~~~GaD 238 (946)
+++.-. .+|.+++++ ...+.++|++-.+.+ =...|++++.++|++.|++++++ +|.. +-+..++|-.+ ||
T Consensus 181 Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY-~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-AD 258 (490)
T 3ou5_A 181 YKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAY-ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-AD 258 (490)
T ss_dssp BCEETTTTEECHHHHHHHHHHHCCSEEEECCSSC-CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CS
T ss_pred cccCCCCCcccHHHHHHHHhhcCCCeEEECCccC-ccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ce
Confidence 222111 255566665 223566777655433 35669999999999999999994 5543 33556777766 99
Q ss_pred EEEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccc--cccCCCccchHHHH
Q 002263 239 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR--DKATSNICTAQALL 315 (946)
Q Consensus 239 i~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irr--e~aTsni~t~~~l~ 315 (946)
|+.+++ |+|. ||..|++.++++....-+. .++. ....+ ++.|-+ ..|+.--+-...+.
T Consensus 259 vVTtTTHKTLr------GPrGG~Il~~~~~~~~~~k---------~~~~-~~~~~---~kkin~aVFPg~qggp~~h~IA 319 (490)
T 3ou5_A 259 IVTTTTHKTLR------GARSGLIFYRKGVKAVDPK---------TGRE-IPYTF---EDRINFAVFPSLQGGPHNHAIA 319 (490)
T ss_dssp EEEEESSSTTC------SCSCEEEEEECSEEEECC-----------CCE-EECCC---HHHHHHHHTTTTCSSCCHHHHH
T ss_pred EEecccccccc------CCCceEEEecccccccccc---------ccch-hHHHH---HHHHHhhcCccccccchHHHHH
Confidence 999999 8875 5666899998754321110 0110 00001 011111 11221111123333
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcCeEEEecC--C--HHHHHHHHHHcCCeeee-
Q 002263 316 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA--D--AHAIASAAYKIEMNLRV- 389 (946)
Q Consensus 316 a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~--~--~~~v~~~L~~~GI~~~~- 389 (946)
|...++ ...+-++ .++-++++.++|+.|++.|.+.| ++++. ...-+.+.+++. + ..+..+.|.+.||.+..
T Consensus 320 AkAVaf-~Ea~~p~-fk~Ya~qVv~NAkaLA~~L~~~G-~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN 396 (490)
T 3ou5_A 320 AVAVAL-KQACTPM-FREYSLQVLKNARAMADALLERG-YSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKN 396 (490)
T ss_dssp HHHHHH-HHHHSHH-HHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEE
T ss_pred HHHHHH-HHHHhHh-HHHHHHHHHHHHHHHHHHHHhCC-CeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCC
Confidence 333222 2333333 57788999999999999999998 99984 333455666653 2 67788889899997642
Q ss_pred --------ecCCeEEEEeccCC----CHHHHHHHHHHHh
Q 002263 390 --------VDSNTVTASFDETT----TLEDVDKLFIVFA 416 (946)
Q Consensus 390 --------~~~~~lris~~~~~----t~edid~ll~~l~ 416 (946)
..++.||+...+.+ .++|++++.+.+.
T Consensus 397 ~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~ 435 (490)
T 3ou5_A 397 TCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFID 435 (490)
T ss_dssp CCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 23467999977754 4677777666664
No 461
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.05 E-value=1.5e-10 Score=133.41 Aligned_cols=238 Identities=11% Similarity=-0.001 Sum_probs=143.0
Q ss_pred CCCEEEEcCCCCCCCHHHHHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-cccccccCHHHHHHHHH
Q 002263 567 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIH 645 (946)
Q Consensus 567 ~~~~Ili~~saHg~~~~~a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn-~~G~~~~~i~~I~~ia~ 645 (946)
++++|+++...|..+...+...|++++... +|+++|+++++ +++++|++++|| .+|.+- + + +++
T Consensus 154 ~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~---~~~k~v~l~~p~NPtG~~~-~--~---~l~ 218 (427)
T 2hox_A 154 PESKVVAHAPFYPVFREQTKYFDKKGYVWA------GNAANYVNVSN---PEQYIEMVTSPNNPEGLLR-H--A---VIK 218 (427)
T ss_dssp CCEEEEECSSCCHHHHHHHHHSCBTTEEEE------EEGGGGTTCSC---GGGEEEEEESSCTTTCCCC-C--C---SST
T ss_pred CCCEEEEeCCCcccHHHHHHHcCCeeeeec------CCHHHHHHhhc---CCceEEEEcCCCCCccccc-H--H---HHc
Confidence 568999999977777777888998876543 57788887775 578899999994 789887 4 2 233
Q ss_pred HcCCEEEEecccccccccccCCC--ccCCCEEEeCCCcccccCCCCCCCcceeEEEe-cccCCCCCCCccccCCCCCCCC
Q 002263 646 DNGGQVYMDGANMNAQVGLTSPG--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPE 722 (946)
Q Consensus 646 ~~g~ll~vD~a~~~a~~gl~~pg--~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lp~~~v~~~~d~~~~~ 722 (946)
++..++|.+... ...... ..+.|+++.+++|+|+.| |.++|+++++ +++...+....
T Consensus 219 --~~~~i~d~~~~~---~~~s~~~~~~~~~i~~~S~SK~~g~~----G~RiG~~~~~~~~l~~~l~~~~----------- 278 (427)
T 2hox_A 219 --GCKSIYDMVYYW---PHYTPIKYKADEDILLFTMSKFTGHS----GSRFGWALIKDESVYNNLLNYM----------- 278 (427)
T ss_dssp --TCEEEEECTTCS---TTTSCCCSCBCCSEEEEEHHHHTSCG----GGCCEEEEECCHHHHHHHHHHH-----------
T ss_pred --CCCEEEeecccC---CCCCccccCCCceEEEEeChhcCCCC----CceEEEEEECCHHHHHHHHHHH-----------
Confidence 567888876432 111111 146789999999998643 5679999995 66554432100
Q ss_pred CCCCCCCcccCccchhhHHHHHHHHHHHH---------c-HhhHHHHHHHHHHHHHHHHHHHhccCCeee-----c----
Q 002263 723 KSQPLGTIAAAPWGSALILPISYTYIAMM---------G-SKGLTEASKIAILNANYMAKRLEKHYPILF-----R---- 783 (946)
Q Consensus 723 ~~~~~~~i~~~~~g~~~~~~~a~a~l~~l---------G-~eGl~~~~~~~~~~a~~l~~~L~~~~~v~~-----~---- 783 (946)
.....+++ ...+. ++...|... + .+-+++..+....+.++|.+.|++...+.+ +
T Consensus 279 -~~~~~~~~--~~~q~----a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 351 (427)
T 2hox_A 279 -TKNTEGTP--RETQL----RSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCN 351 (427)
T ss_dssp -HHHTSSCC--HHHHH----HHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEET
T ss_pred -HhcCCCCC--HHHHH----HHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccc
Confidence 00001111 11111 122222221 1 122334445556778889999987422211 0
Q ss_pred -----cCCCceeeeEEEecccccccCCCCHHHHHHHHH-HCCcccC-CCCCCC-CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 002263 784 -----GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP-TMSWPV-PGTLMIEPTESESKEELDRYCDALIS 855 (946)
Q Consensus 784 -----~~~~~~~~e~v~~~~~~~~~~g~~~~~i~~~L~-~~Gi~~~-~~~~p~-~~~lri~~t~~~t~~eid~~~~aL~~ 855 (946)
.+++..+ ++++++. +..++.++|. ++||.+. ...|+. ++++||++.. ++++++++++.|++
T Consensus 352 ~~~~~~p~~g~f--~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~--~~e~l~~~l~~l~~ 420 (427)
T 2hox_A 352 YFRRMRPPSPSY--AWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK--TQDDFDQLMYYLKD 420 (427)
T ss_dssp TTTEEECCCCSE--EEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS--CHHHHHHHHHHHHH
T ss_pred cccccCCCCceE--EEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 1112221 3456541 2345677765 7899864 233443 5789999974 78889999888877
Q ss_pred HH
Q 002263 856 IR 857 (946)
Q Consensus 856 i~ 857 (946)
++
T Consensus 421 ~~ 422 (427)
T 2hox_A 421 MV 422 (427)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 462
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.05 E-value=1.5e-09 Score=124.62 Aligned_cols=271 Identities=14% Similarity=0.169 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHH-hccccCCCCEEEEcCCC-CHHHHHHHHHh-h--------cCCCe
Q 002263 101 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NNIQKGKKKTFIIASNC-HPQTIDICITR-A--------DGFDI 169 (946)
Q Consensus 101 l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la-~~~~~~~gd~vvv~~~~-Hps~~~~~~~~-a--------~~~gi 169 (946)
..++.+.++++++ +..++.++++||.++++++.+ ..+. ++++||+.+.. |..+...+... . ...|+
T Consensus 94 ~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~ar~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~ 170 (424)
T 2e7u_A 94 EVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRLARGYT--GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGV 170 (424)
T ss_dssp HHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTC
T ss_pred HHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhh--CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCC
Confidence 3456678889986 556788999999888877653 2233 45777766654 43222211000 0 01232
Q ss_pred ------EEEEe---ccccccc-cC---CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCccccC-CC
Q 002263 170 ------KVVVS---DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTI-LK 230 (946)
Q Consensus 170 ------~v~~~---~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~al~~-l~ 230 (946)
.+..+ |+++|++ ++ +++++|++... +.+|.+.+ +++|.++ +++|+++++| +..+ +. ..
T Consensus 171 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~D-Ev~~-g~~~g 247 (424)
T 2e7u_A 171 PEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIAD-EVMT-GFRLA 247 (424)
T ss_dssp CHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEE-CTTT-TTTSS
T ss_pred CCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEe-cCcc-ccccc
Confidence 23333 4456665 54 46776666432 24798887 9999999 9999999994 3333 22 11
Q ss_pred CC---CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccC
Q 002263 231 PP---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 305 (946)
Q Consensus 231 ~~---~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aT 305 (946)
.. ..+| .|++.. +|.|+. |-.+|++.+++++++.+... + + + ....|
T Consensus 248 ~~~~~~~~~~~~di~s~-sK~l~~-----G~~~G~~~~~~~~~~~~~~~---------~-~-~------------~~~~t 298 (424)
T 2e7u_A 248 FGGATELLGLKPDLVTL-GKILGG-----GLPAAAYAGRREIMEKVAPL---------G-P-V------------YQAGT 298 (424)
T ss_dssp TTHHHHHHTCCCSEEEE-CGGGGT-----TSSCEEEEECHHHHTTBTTT---------S-S-B------------CCCCT
T ss_pred hhHHHHHhCCCcchhhh-hhhhhC-----CcceEEEEEcHHHHhhhccc---------C-C-c------------ccCCC
Confidence 11 1123 576532 498862 22368888998887765210 0 0 0 00112
Q ss_pred CCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCEE--EcCCCCcCeEEEecCC-------
Q 002263 306 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVE--VQGLPFFDTVKVKCAD------- 372 (946)
Q Consensus 306 sni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~~--~~~~~~~~~~~i~~~~------- 372 (946)
.+.. +.+..+..+++ ..+.. .+++.+++.++.++++++|+++ | +. +.+.. .-+.+.+..
T Consensus 299 ~~~~-~~~~aaa~aal--~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g--~~~~i~~~~~~~~~~~ 370 (424)
T 2e7u_A 299 LSGN-PLAMAAGLATL--ELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKG-LPHTVNRVG--SMITVFFTEGPVVTFQ 370 (424)
T ss_dssp TCSC-HHHHHHHHHHH--HHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEET--TEEEEESSSSCCCSHH
T ss_pred CCCC-HHHHHHHHHHH--HHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeec--eEEEEEEeCCCCcchh
Confidence 1111 11122222332 22211 1456677788888888888764 4 31 11111 123333321
Q ss_pred ---------HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 373 ---------AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 373 ---------~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.++.+.|.++||.+.......++ +...+|++|+++++++|.
T Consensus 371 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~t~~~i~~~l~~l~ 421 (424)
T 2e7u_A 371 DARRTDTELFKRFFHGLLDRGIYWPPSNFEAAF--LSVAHREEDVEKTLEALR 421 (424)
T ss_dssp HHTTSCHHHHHHHHHHHHTTTEECCSSSSSCEE--CCTTCCHHHHHHHHHHHH
T ss_pred hhcccCHHHHHHHHHHHHHCCeEEeccCCCceE--eeccCCHHHHHHHHHHHH
Confidence 457889999999998764333444 557899999999999986
No 463
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.03 E-value=4.7e-09 Score=120.77 Aligned_cols=269 Identities=13% Similarity=0.146 Sum_probs=155.0
Q ss_pred HHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcC-CCCHHHHHHHHH---------hhcCCCe-
Q 002263 102 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIAS-NCHPQTIDICIT---------RADGFDI- 169 (946)
Q Consensus 102 ~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~-~~Hps~~~~~~~---------~a~~~gi- 169 (946)
.++.+.++++++ ...++.++++||.++++++.+.+ .. ++++||+.+ ..|..+...+.. .....++
T Consensus 96 ~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~a~~~~--~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~ 172 (429)
T 3k28_A 96 NKLAKLVIERVP-SIEIVRMVNSGTEATMSALRLARGYT--GRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVP 172 (429)
T ss_dssp HHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHH--TCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCC
T ss_pred HHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHHHHHhh--CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCC
Confidence 345678888886 45678899999988887764433 22 567777654 555443322100 0000111
Q ss_pred -----EEEEe---ccccccc-cC---CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEecCccccCCCCC
Q 002263 170 -----KVVVS---DLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTILKPP 232 (946)
Q Consensus 170 -----~v~~~---~~~~l~~-i~---~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~~~al~~l~~~ 232 (946)
.+..+ |++++++ +. +++++|++..+ +..|.+.+ +++|.++|+++|+++++| +... +. ..
T Consensus 173 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D-Ev~~-g~--~~ 248 (429)
T 3k28_A 173 EGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFD-EVMT-GF--RV 248 (429)
T ss_dssp HHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEE-CTTT-TT--TS
T ss_pred CcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEe-cccc-cc--cc
Confidence 22233 4455665 43 46777777644 46788888 999999999999999994 3321 11 11
Q ss_pred CC------c--cceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccccccccccc
Q 002263 233 GE------L--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 304 (946)
Q Consensus 233 ~~------~--GaDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~a 304 (946)
+. + ..|+++. +|.|+. |-.+|++.+++++++.+... .+ + ...+
T Consensus 249 g~~~~~~~~~~~~di~t~-sK~~~~-----G~~iG~~~~~~~~~~~~~~~----------~~-~------------~~~~ 299 (429)
T 3k28_A 249 AYNCGQGYYGVTPDLTCL-GKVIGG-----GLPVGAYGGKAEIMRQVAPS----------GP-I------------YQAG 299 (429)
T ss_dssp STTHHHHHHTCCCSEEEE-CGGGGT-----TSCCEEEEECHHHHTTBTTT----------SS-B------------CCCC
T ss_pred CcchHHHHhCCCCceehh-hhhhcC-----CCCeEEEEEcHHHHhhhccC----------CC-c------------cccC
Confidence 21 2 2466543 488852 34568899999887765210 00 0 0112
Q ss_pred CCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCE-EEcCCCCcCeEEEec---------
Q 002263 305 TSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTV-EVQGLPFFDTVKVKC--------- 370 (946)
Q Consensus 305 Tsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~~-~~~~~~~~~~~~i~~--------- 370 (946)
|.+.. +.+..+..+++ ..+ . +++.+++.++.++++++|+++ +.+ .+.... .-+.+.+
T Consensus 300 t~~~~-~~a~aaa~aal--~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~ 370 (429)
T 3k28_A 300 TLSGN-PLAMAAGYETL--VQL-T---PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAG--SMIGIFFTDEPVINYD 370 (429)
T ss_dssp TTTTC-HHHHHHHHHHH--HTC-C---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEET--TEEEEESSSSCCCSHH
T ss_pred CCCCC-hHHHHHHHHHH--HHH-H---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeec--cEEEEEEecCCccccc
Confidence 22221 11111222222 222 2 567777788888888888764 211 111111 1122222
Q ss_pred ----CC---HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 371 ----AD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 371 ----~~---~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
++ ..++.+.|.++||.++....+.+|++ ..+|++|+++++++|..
T Consensus 371 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~~--~~~t~e~i~~~l~~l~~ 422 (429)
T 3k28_A 371 AAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFLS--TVHSDADIEATIAAAEI 422 (429)
T ss_dssp HHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCCC--TTCCHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHCCeEEecCCCCCEEEE--CCCCHHHHHHHHHHHHH
Confidence 12 46888999999999876545667774 57899999999999963
No 464
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.98 E-value=7.8e-09 Score=120.62 Aligned_cols=267 Identities=13% Similarity=0.107 Sum_probs=153.9
Q ss_pred HHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cc----cC-----------------C---CCEEEEcC-CCCHHHHHH
Q 002263 106 TMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQ----KG-----------------K---KKTFIIAS-NCHPQTIDI 159 (946)
Q Consensus 106 ~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~----~~-----------------~---gd~vvv~~-~~Hps~~~~ 159 (946)
+.++++++.....+.++++||.|+++++.+.+ +. ++ + +++||+.+ .-|..+...
T Consensus 117 ~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~ 196 (472)
T 1ohv_A 117 ESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGC 196 (472)
T ss_dssp HTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHH
T ss_pred HHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHH
Confidence 34555664445568899999999998864332 10 11 2 37888776 556555544
Q ss_pred HHHhhc-----CCCeE-----EEEe--------------------ccccccc-cCC------CEeEEEEEc-CCCceeec
Q 002263 160 CITRAD-----GFDIK-----VVVS--------------------DLKDIDY-KSG------DVCGVLVQY-PGTEGEVL 201 (946)
Q Consensus 160 ~~~~a~-----~~gi~-----v~~~--------------------~~~~l~~-i~~------~t~~v~v~~-pn~~G~i~ 201 (946)
+.. .. ..+.. ...+ ++++|++ +++ ++++|++.. +|.+|.+.
T Consensus 197 ~~~-~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~ 275 (472)
T 1ohv_A 197 LAT-THSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNH 275 (472)
T ss_dssp HHH-CCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBC
T ss_pred Hhc-CCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCC
Confidence 321 11 01111 1111 2345555 543 789888864 46799988
Q ss_pred c----hHHHHHHHHhCCcEEEEEecCcc-ccCCC---CCCCcc----ceEEEeccccccccCCCCCCceEEEEEchhhhh
Q 002263 202 D----YGDFIKNAHANGVKVVMATDLLA-LTILK---PPGELG----ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKR 269 (946)
Q Consensus 202 d----i~~i~~~a~~~gal~~v~a~~~a-l~~l~---~~~~~G----aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~ 269 (946)
+ +++|.++|+++|+++++|. ..+ ++... ....+| .|+++.| |.+ +|| |++. ++++.
T Consensus 276 ~~~~~l~~l~~l~~~~g~lli~DE-v~~g~g~~g~~~~~~~~gv~~~~Di~t~s-K~~-----l~G---G~~~-~~~~~- 343 (472)
T 1ohv_A 276 ASDDFFRKLRDISRKHGCAFLVDE-VQTGGGSTGKFWAHEHWGLDDPADVMTFS-KKM-----MTG---GFFH-KEEFR- 343 (472)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEC-TTTTTTTTSSSSGGGGGCCSSCCSEEEEC-GGG-----SSE---EEEE-CGGGS-
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeC-cccCCCCCCCchhccccCCCCCCCEEEEc-ccc-----ccC---CccC-chhhc-
Confidence 7 9999999999999999942 322 33221 112345 6876544 773 122 5654 54431
Q ss_pred cCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 002263 270 MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 349 (946)
Q Consensus 270 ~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L 349 (946)
.+. + + ...+|.+.. +.+..+..+++ ..+..+ ++.++..++.++|+++|
T Consensus 344 ~~~-------------~-~------------~~~~T~~~~-~~~~aaa~aal--~~~~~~---~~~~~~~~~~~~l~~~L 391 (472)
T 1ohv_A 344 PNA-------------P-Y------------RIFNTWLGD-PSKNLLLAEVI--NIIKRE---DLLSNAAHAGKVLLTGL 391 (472)
T ss_dssp CSS-------------S-S------------SSCCSSSSC-HHHHHHHHHHH--HHHHHT---THHHHHHHHHHHHHHHH
T ss_pred ccc-------------c-c------------cccCccCcc-HHHHHHHHHHH--HHHHhC---CHHHHHHHHHHHHHHHH
Confidence 110 0 0 011232111 11222333333 333222 35677778888888888
Q ss_pred hcCC-CEE-EcC--CCCcCeEEEecCC---HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 350 KKLG-TVE-VQG--LPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 350 ~~~g-~~~-~~~--~~~~~~~~i~~~~---~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+++. ++. .+. .+....+.+.+++ +.++.++|.++||.+.....+.||++++..+|++||++++++|..
T Consensus 392 ~~l~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~ 466 (472)
T 1ohv_A 392 LDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSD 466 (472)
T ss_dssp HHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCcEEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 7651 021 010 0111124445543 578999999999998765467999999999999999999999963
No 465
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=98.95 E-value=8.5e-08 Score=113.77 Aligned_cols=288 Identities=13% Similarity=0.060 Sum_probs=159.7
Q ss_pred CcceEEcccHHHHHHHHHHHhc---cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----------ccccc-
Q 002263 116 MSNASLLDEGTAAAEAMAMCNN---IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----------KDIDY- 181 (946)
Q Consensus 116 ~~~~sl~~~~Ta~~ea~~la~~---~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~----------~~l~~- 181 (946)
+.++.+++|++.++..++.++. +. ++||+|++++-.|+.+..... ....|++++.++. ++|++
T Consensus 165 ~~~I~~t~G~~eal~~~~~~l~~~~l~-~~Gd~Vlv~~P~y~~~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 241 (546)
T 2zy4_A 165 SVNLFAVEGGTAAMAYIFESLKLNGLL-KAGDKVAIGMPVFTPYIEIPE--LAQYALEEVAINADPSLNWQYPDSELDKL 241 (546)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHTTSS-CTTCEEEEEESCCHHHHHHHH--STTSCCEEEEEECBGGGTTBCCHHHHGGG
T ss_pred cceEEEECCHHHHHHHHHHHhhhhhcC-CCCCEEEEeCCCCccHHHHHH--HcCCCcEEEEEecCcccCCCCCHHHHHHh
Confidence 4678888999987776655421 11 278999999999999887653 2345788877654 23444
Q ss_pred cCCCEeEEEEEcC-CCceeecc---hHHHHHHH--HhCCcEEEEEecCcc-ccC-CCCCCC--ccceEEEecc-cccccc
Q 002263 182 KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNA--HANGVKVVMATDLLA-LTI-LKPPGE--LGADIVVGSA-QRFGVP 250 (946)
Q Consensus 182 i~~~t~~v~v~~p-n~~G~i~d---i~~i~~~a--~~~gal~~v~a~~~a-l~~-l~~~~~--~GaDi~v~s~-k~lg~P 250 (946)
+++++++|++++| |.+|.+.+ +++|+++| +++|+++++|. ..+ +.. ..+..+ .+.+|++.|. |.||.|
T Consensus 242 ~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De-~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~ 320 (546)
T 2zy4_A 242 KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDD-VYGTFADDFQSLFAICPENTLLVYSFSKYFGAT 320 (546)
T ss_dssp GSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEEC-TTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCG
T ss_pred hCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeC-cchhhcccCcCHHHhCCCCEEEEEeCccccCCC
Confidence 5678999999998 67999875 67788998 78899999953 222 211 111111 2567888887 877533
Q ss_pred CCCCCCceEEEEEchh-hhhcC----CCceEe-Eeec--CCCCcceEEecccc-ccccccc--ccCCCccchHHH-HHHH
Q 002263 251 MGYGGPHAAFLATSQE-YKRMM----PGRIVG-VSID--SSGKPALRVAMQTR-EQHIRRD--KATSNICTAQAL-LANM 318 (946)
Q Consensus 251 ~~~GGP~~g~l~~~~~-~~~~l----p~~~~G-~s~d--~~g~~~~~l~l~tr-e~~irre--~aTsni~t~~~l-~a~~ 318 (946)
|=-+|+++++++ +++++ |....- .... .-....+.+.+..| ....|+- ..+..+++.+.. .++.
T Consensus 321 ----GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~ 396 (546)
T 2zy4_A 321 ----GWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALF 396 (546)
T ss_dssp ----GGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHH
T ss_pred ----CcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHH
Confidence 122799998875 54443 210000 0000 00000000000000 0000110 111122222111 1111
Q ss_pred HHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCcCeEEEecC-------------------C-HHH
Q 002263 319 AAMYAVYH--GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA-------------------D-AHA 375 (946)
Q Consensus 319 aa~y~~~~--g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~~~~~i~~~-------------------~-~~~ 375 (946)
+ + ..++ +..-++++.+...++.+++.+.|. ++ +.+.. ...+ -+.++++ . ...
T Consensus 397 a-~-~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~-~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~ 471 (546)
T 2zy4_A 397 S-L-FALMDEADEYKHTLKQLIRRRETTLYRELG-MP-PLRDENAVDY-YTLIDLQDVTAKLYGEAFSEWAVKQSSTGDM 471 (546)
T ss_dssp H-H-HHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SS-CCCCTTBCCS-EEEEEHHHHHHHHHCHHHHHHHHHHCCHHHH
T ss_pred H-H-HHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CC-cccCCCCeeE-EEEEEHHHhhcccccHHHHHHhhccCCHHHH
Confidence 1 1 1232 233356666777777777888775 44 43221 1111 1223321 1 234
Q ss_pred HHHHHHHcCCeeeee-----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 376 IASAAYKIEMNLRVV-----DSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 376 v~~~L~~~GI~~~~~-----~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.+.|.++||.+..- .++.+|+|+. ..++++++++++.|+.
T Consensus 472 l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~ 517 (546)
T 2zy4_A 472 LFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRK 517 (546)
T ss_dssp HHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHH
Confidence 667777889988642 2468999997 4578999999998873
No 466
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.85 E-value=5.2e-08 Score=112.27 Aligned_cols=270 Identities=15% Similarity=0.191 Sum_probs=147.9
Q ss_pred HHHHHHHHhCCCCcceEEcccHHHHHHHHH-HHhccccCCCCEEEEcC-CCCHHHHHHHH-HhhcCCCeEEEEecccc--
Q 002263 104 FQTMIADLTGLPMSNASLLDEGTAAAEAMA-MCNNIQKGKKKTFIIAS-NCHPQTIDICI-TRADGFDIKVVVSDLKD-- 178 (946)
Q Consensus 104 ~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~-la~~~~~~~gd~vvv~~-~~Hps~~~~~~-~~a~~~gi~v~~~~~~~-- 178 (946)
+.+.+++++.- ...+.++++||.|.|+++ +|+.++ .+++||.-+ .-|..+..... .-..........++..+
T Consensus 132 lae~l~~~~p~-~~~v~f~~SGsEA~e~AiklAr~~t--gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~ 208 (454)
T 4ao9_A 132 LARLICERFPQ-IEQLRFTNSGTEANLMALTAALHFT--GRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQ 208 (454)
T ss_dssp HHHHHHHHSTT-CSEEEEESSHHHHHHHHHHHHHHHH--TCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHH
T ss_pred HHHHHHHhCCC-CCEEEEeCchHHHHHHHHHHHHhcc--cCCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHH
Confidence 44677777742 334778899998888775 444444 567777555 55543322110 00011223445555543
Q ss_pred -ccc-c---CCCEeEEEEEc-CCCceeecc----hHHHHHHHHhCCcEEEEEecCccccCCCCCC---Ccc--ceEEEec
Q 002263 179 -IDY-K---SGDVCGVLVQY-PGTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTILKPPG---ELG--ADIVVGS 243 (946)
Q Consensus 179 -l~~-i---~~~t~~v~v~~-pn~~G~i~d----i~~i~~~a~~~gal~~v~a~~~al~~l~~~~---~~G--aDi~v~s 243 (946)
+++ + .+++++|++.- .+..|.+.+ +++|.++|+++|+++++| +.+. |-...-+ .+| .|+++ -
T Consensus 209 ~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~D-EV~t-GR~G~~~a~e~~gv~PDi~t-~ 285 (454)
T 4ao9_A 209 TARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFD-EVMT-SRLAPHGLANKLGIRSDLTT-L 285 (454)
T ss_dssp HHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEE-CTTG-GGGSTTCHHHHHTCCCSEEE-E
T ss_pred HHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEE-CCCc-CCCccccchhccCCCCcEEE-e
Confidence 443 3 35788888753 266788886 999999999999999994 4433 3221111 123 38864 3
Q ss_pred cccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHH-H
Q 002263 244 AQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM-Y 322 (946)
Q Consensus 244 ~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~-y 322 (946)
+|.+++ |.| .|.+.+++++++.+.+.. +. + ...+|-+ ..++ ++.|++ -
T Consensus 286 gK~lgg----G~P-iga~~~~~ei~~~~~~~~--------~~--~------------~h~~T~~---gnPl-a~AAala~ 334 (454)
T 4ao9_A 286 GKYIGG----GMS-FGAFGGRADVMALFDPRT--------GP--L------------AHSGTFN---NNVM-TMAAGYAG 334 (454)
T ss_dssp EGGGGT----TSS-CEEEEECHHHHGGGCTTT--------CS--C------------CCCCTTT---TCHH-HHHHHHHH
T ss_pred ccccCC----CCc-ceeeeeHHHHHHHHhhcc--------CC--c------------cccCCCC---CCHH-HHHHHHHH
Confidence 477753 445 456678888887663210 10 0 0112211 1122 222222 1
Q ss_pred HHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CC-EEEcCCCCcCeEEEe-----------cCC---HHHHHHHHHHc
Q 002263 323 AVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GT-VEVQGLPFFDTVKVK-----------CAD---AHAIASAAYKI 383 (946)
Q Consensus 323 ~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g~-~~~~~~~~~~~~~i~-----------~~~---~~~v~~~L~~~ 383 (946)
+..+-.+ ++.+++.++.++|+++|+++ +- .++.+...+-.+-|. ..+ ...+...|.++
T Consensus 335 L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~ 411 (454)
T 4ao9_A 335 LTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNE 411 (454)
T ss_dssp HHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHT
T ss_pred HHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHC
Confidence 3455443 45566777788888888764 20 011110000001110 001 34677788899
Q ss_pred CCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 384 EMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 384 GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
||++.+ .+.+ .+...+|++|||+++++|+.
T Consensus 412 Gv~~~p--~~~~--~~s~~~T~~dId~~l~al~~ 441 (454)
T 4ao9_A 412 DIYSSP--RGFV--VLSLPLTDADIDRYVAAIGS 441 (454)
T ss_dssp TEECCT--TCEE--ECCTTCCHHHHHHHHHHHHH
T ss_pred CEEEcC--CCCE--EEeCCCCHHHHHHHHHHHHH
Confidence 998864 2333 34555899999999999974
No 467
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.65 E-value=5e-06 Score=95.97 Aligned_cols=274 Identities=16% Similarity=0.120 Sum_probs=151.4
Q ss_pred HHHHHHHHHhCCC-CcceEEcccHHHHHHHHH-HHhccccCCCCEEEEcC-CCCHHHHHHHHHhhc---------CCCeE
Q 002263 103 NFQTMIADLTGLP-MSNASLLDEGTAAAEAMA-MCNNIQKGKKKTFIIAS-NCHPQTIDICITRAD---------GFDIK 170 (946)
Q Consensus 103 e~q~~la~L~g~~-~~~~sl~~~~Ta~~ea~~-la~~~~~~~gd~vvv~~-~~Hps~~~~~~~~a~---------~~gi~ 170 (946)
++-+.+++++..+ ...+.++++||.|.|+++ +|..++ .+++|+.-+ .-|..+...+..-.. +..-.
T Consensus 111 ~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t--~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~ 188 (456)
T 4atq_A 111 AVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLAT--GRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPE 188 (456)
T ss_dssp HHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHH--CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSS
T ss_pred HHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhh--cCCeEEEEecccCCccccccccccCccccccCCCCcccc
Confidence 3446778888643 334667899998888775 555444 567777555 566655544321111 11123
Q ss_pred EEEecc--------------c-------cccc-cC-CCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEEEEec
Q 002263 171 VVVSDL--------------K-------DIDY-KS-GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATD 222 (946)
Q Consensus 171 v~~~~~--------------~-------~l~~-i~-~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~v~a~ 222 (946)
+..+|. + .++. +. +++++|++.-- ..-|.+.+ ++++.++|+++|+++++| .
T Consensus 189 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~D-E 267 (456)
T 4atq_A 189 VYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIAD-E 267 (456)
T ss_dssp EEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEE-C
T ss_pred ceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEec-c
Confidence 344432 0 1112 22 46777777532 45677753 899999999999999994 3
Q ss_pred Cc-cccCCCCC---CCcc--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEeccccc
Q 002263 223 LL-ALTILKPP---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 296 (946)
Q Consensus 223 ~~-al~~l~~~---~~~G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre 296 (946)
.. +++-...- ..+| .||++. +|.++ .|.|- |.+.+++++.+.+.+...|
T Consensus 268 V~tG~GRtG~~~a~e~~gv~PDivt~-gK~lg----gg~P~-~av~~~~~i~~~~~~~~~~------------------- 322 (456)
T 4atq_A 268 VQSGFCRTGEWFAVDHEGVVPDIITM-AKGIA----GGLPL-SAITGRADLLDAVHPGGLG------------------- 322 (456)
T ss_dssp TTTTTTTTSSSSGGGGTTCCCSEEEE-CGGGG----TTSSC-EEEEEEHHHHTTSCTTSSC-------------------
T ss_pred cccccCCccccccccccCCCCchhhh-hhccc----CcCCc-eeeEecHHHHhcccccCCC-------------------
Confidence 32 33222111 1233 498765 47764 34454 4566777777655321111
Q ss_pred ccccccccCCCccchHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----C--CEEEcCC----CCcCeE
Q 002263 297 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----G--TVEVQGL----PFFDTV 366 (946)
Q Consensus 297 ~~irre~aTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~----g--~~~~~~~----~~~~~~ 366 (946)
+|-+ ..+-+..+..+. +..+-.+++ .++..++.++|+++|+++ . ...++.+ -.+--|
T Consensus 323 -------~Tf~-gnpla~aaala~--L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~gi 389 (456)
T 4atq_A 323 -------GTYG-GNPVACAAALAA--IDTMEQHDL---NGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAI 389 (456)
T ss_dssp -------CSSS-SCHHHHHHHHHH--HHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEE
T ss_pred -------CCCC-CChHHHHhhHHH--HHHHhhccH---HHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEE
Confidence 1111 111122222222 344444443 445555666676666553 1 0011111 011112
Q ss_pred EEecC-----C---HHHHHHHHHHcCCeeeeec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 367 KVKCA-----D---AHAIASAAYKIEMNLRVVD--SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 367 ~i~~~-----~---~~~v~~~L~~~GI~~~~~~--~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
-+..+ . +..+.+++.++|+.+.... ++.||+++....|++|||+++++|..
T Consensus 390 el~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~ 450 (456)
T 4atq_A 390 ELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAA 450 (456)
T ss_dssp EEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 22111 1 5678999999999886543 47899999999999999999999863
No 468
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.09 E-value=3.1e-09 Score=123.19 Aligned_cols=274 Identities=15% Similarity=0.144 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHhCCCCcceEEcccHHHHHHHHHHHhc-cccCCCCEEEEcCC-CCHHHHHHHHHhhcCCCe--EE---E
Q 002263 100 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASN-CHPQTIDICITRADGFDI--KV---V 172 (946)
Q Consensus 100 ~l~e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~la~~-~~~~~gd~vvv~~~-~Hps~~~~~~~~a~~~gi--~v---~ 172 (946)
...++.+.++++++ ....+.++++||.++++++.+.+ +. .+++||+.+. -|..+...+ +-....|+ .+ .
T Consensus 141 ~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik~ar~~t--gr~~ii~~~~~yHG~~~~~~-sg~~~~g~~~~~~~~~ 216 (465)
T 2yky_A 141 NEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALATATAIT--GRKTVLAFDGGYHGGLLNFA-SGHAPTNAPYHVVLGV 216 (465)
Confidence 44566788899984 23347788999988887764332 22 5688887765 555555443 10011233 22 2
Q ss_pred Eeccccccc-cC---CCEeEEEEEc-CCCceeecc----hHHHHHHHHhCCcEEEEEecCccccCCCCC---CCcc--ce
Q 002263 173 VSDLKDIDY-KS---GDVCGVLVQY-PGTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTILKPP---GELG--AD 238 (946)
Q Consensus 173 ~~~~~~l~~-i~---~~t~~v~v~~-pn~~G~i~d----i~~i~~~a~~~gal~~v~a~~~al~~l~~~---~~~G--aD 238 (946)
+.|+++|++ ++ +++++|++.. ++.+|.+.+ +++|.++|+++|+++++| +..+ ...... ..+| .|
T Consensus 217 ~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D-Ev~~-~r~g~~~a~~~~gv~pD 294 (465)
T 2yky_A 217 YNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFD-EVMT-SRLSGGGAQEMLGISAD 294 (465)
Confidence 345567776 65 6788888754 345898776 999999999999999993 3333 211111 1223 56
Q ss_pred EEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHH-HHHH
Q 002263 239 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA-LLAN 317 (946)
Q Consensus 239 i~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~-l~a~ 317 (946)
+++ -+|.+++ |--+|++.+++++++.+.....| . + ...+|. +.+.. ..+.
T Consensus 295 i~t-~sK~lg~-----G~piG~v~~~~~i~~~l~~~~~g-------~--~------------~~~~T~--~~npla~aAa 345 (465)
T 2yky_A 295 LTT-LGKYIGG-----GMSFGAFGGRRDLMERFDPARDG-------A--F------------AHAGTF--NNNILTMSAG 345 (465)
Confidence 653 2488853 22357888888887766321000 0 0 001111 11111 1112
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CEEEc----CCCCcCeEEEec-------------CC-HHHHHH
Q 002263 318 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQ----GLPFFDTVKVKC-------------AD-AHAIAS 378 (946)
Q Consensus 318 ~aa~y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g-~~~~~----~~~~~~~~~i~~-------------~~-~~~v~~ 378 (946)
.+++ ..+..+ .+.+++.++.++|+++|+++. .+.+. +...+-.|.+.. .. ..++.+
T Consensus 346 ~aaL--~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~ 420 (465)
T 2yky_A 346 HAAL--TQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFF 420 (465)
Confidence 2222 333332 466777888888988888751 12221 111111121211 01 457888
Q ss_pred HHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 379 AAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 379 ~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
.|.++||.+.....+. ++..+|++||++++++|..
T Consensus 421 ~ll~~GV~v~p~~~~~----~s~~~t~edid~~l~~l~~ 455 (465)
T 2yky_A 421 HMLRKGIYLAPRGMYA----LSLEIADAGRDAFAEALAD 455 (465)
Confidence 8999999886532222 5567899999999999975
No 469
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=98.40 E-value=8.7e-06 Score=92.76 Aligned_cols=305 Identities=14% Similarity=0.082 Sum_probs=162.3
Q ss_pred cCCCCCC-----CCCcHHHHHH--HH-hCCccccccCCChhhhhhhHHHHHHHHHHHHHHHh-CC-----CCcc--eEEc
Q 002263 59 IGMGYYN-----THVPPVILRN--IM-ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLT-GL-----PMSN--ASLL 122 (946)
Q Consensus 59 ~G~g~~~-----~~~p~~i~~~--i~-~~~~~~t~~~pyq~e~sqg~l~~l~e~q~~la~L~-g~-----~~~~--~sl~ 122 (946)
+|.|.|+ ..+|+.+.+. ++ +. .....|+|. +|.. ++++.+++++ +. ++.+ +..+
T Consensus 34 l~~G~~~d~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~-----~G~~----~lr~aia~~~~~~~~~~~~~~~i~i~~t 103 (405)
T 3k7y_A 34 LSIGVCCNDDGDLHIFDSVLNADKLVTEN-YKEKPYLLG-----NGTE----DFSTLTQNLIFGNNSKYIEDKKICTIQC 103 (405)
T ss_dssp CSCSSCBCTTSSBCCCHHHHHHHHHHHHH-CCCCCCCTT-----SSCH----HHHHHHHHHHHCSSCTTTTTTCEEEEEE
T ss_pred eeeeeeECCCCCCcccHHHHHHHHHhcCC-CCCCCCCCC-----CCcH----HHHHHHHHHHcCCCCccccccceEEEEc
Confidence 4666541 3466777644 32 22 224456543 2332 3445555554 32 1233 4677
Q ss_pred ccHHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEecc----------ccccc-cC--CCEeEE
Q 002263 123 DEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----------KDIDY-KS--GDVCGV 189 (946)
Q Consensus 123 ~~~Ta~~ea~~la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~v~~~~~----------~~l~~-i~--~~t~~v 189 (946)
.|++.+...+..++... .+ |+|++++-.++.+...++ ..|.+++.+++ +++++ +. ++++++
T Consensus 104 ~G~~~al~~~~~~l~~~-~~-d~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i 177 (405)
T 3k7y_A 104 IGGTGAIFVLLEFLKML-NV-ETLYVTNPPYINHVNMIE----SRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSV 177 (405)
T ss_dssp EHHHHHHHHHHHHHHTT-TC-CEEEEESSCCHHHHHHHH----TTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEE
T ss_pred CchHHHHHHHHHHHHhc-CC-CEEEEeCCCCHhHHHHHH----HcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEE
Confidence 88887777665544310 16 999999999999888764 46888888765 22333 32 356778
Q ss_pred EEEcC--CCceeec---chHHHHHHHHhCCcEEEEEecCccccC--CC-C---C---CCccce-EEEecc-ccccccCCC
Q 002263 190 LVQYP--GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTI--LK-P---P---GELGAD-IVVGSA-QRFGVPMGY 253 (946)
Q Consensus 190 ~v~~p--n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~--l~-~---~---~~~GaD-i~v~s~-k~lg~P~~~ 253 (946)
++..| |.+|.+- .+++|+++|+++|++++.+.-...+.. .. + . .+.+-. |++.|. |.|+.|
T Consensus 178 ~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~--- 254 (405)
T 3k7y_A 178 ILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLY--- 254 (405)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCT---
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCc---
Confidence 77653 8899886 478889999999999999531111211 00 0 0 011223 455665 888643
Q ss_pred CCCceEEEEE---chhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCCCccchHHHHHHHHHHHHHH--hC-
Q 002263 254 GGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY--HG- 327 (946)
Q Consensus 254 GGP~~g~l~~---~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTsni~t~~~l~a~~aa~y~~~--~g- 327 (946)
|=-+|++.+ ++++++.+-.. + ....|. ..++. +. +...+++.++.. ++
T Consensus 255 -GlRiG~~~~~~~~~~~~~~~~~~-----------------l----~~~~~~-~~~~~--~~-~~q~~~~~~l~~~~l~~ 308 (405)
T 3k7y_A 255 -GERAGALHIVCKNQEEKKIVFNN-----------------L----CFIVRK-FYSSP--VI-HTNRILCQLLNNQNLKL 308 (405)
T ss_dssp -TTTEEEEEEECSSHHHHHHHHHH-----------------H----HHHHHT-TTSSC--CH-HHHHHHHHHHHCHHHHH
T ss_pred -cccceEEEEEeCCHHHHHHHHHH-----------------H----HHHHhc-ccCCC--cH-HHHHHHHHHhCCHHHHH
Confidence 335788753 33333222000 0 000010 11221 11 111111111111 00
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHh----cCCC---EEEcCCCCcCeEEE-ecCCHHHHHHHHHHcCCeeeeecCCeEEE
Q 002263 328 --PEGLKTIAQRVHGLAGTFALGLK----KLGT---VEVQGLPFFDTVKV-KCADAHAIASAAYKIEMNLRVVDSNTVTA 397 (946)
Q Consensus 328 --~~Gl~~i~~~~~~~a~~l~~~L~----~~g~---~~~~~~~~~~~~~i-~~~~~~~v~~~L~~~GI~~~~~~~~~lri 397 (946)
.+-++++.++..+..+++.+.|+ ++|. +++... ...-|.+ ..+ .+.+++|.++||.+.+ .+ |+
T Consensus 309 ~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p-~gg~f~~~~l~--~~~~~~L~~~gV~v~p--~~--Ri 381 (405)
T 3k7y_A 309 NWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK-QRGLFSFVPLL--AKIAEHLKTHHIYIIN--NG--RI 381 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS-CCSSEEECGGG--GGGTTTTTTTTEECCT--TS--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC-CceEEEecCCC--HHHHHHHHHCCEeecC--CC--eE
Confidence 12355666778888889999998 7751 233321 1111222 222 2445667677998764 23 88
Q ss_pred EeccCCCHHHHHHHHHHHh
Q 002263 398 SFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 398 s~~~~~t~edid~ll~~l~ 416 (946)
|+.-. ++++|++++++|.
T Consensus 382 s~a~~-~~~~i~~~~~~i~ 399 (405)
T 3k7y_A 382 NVSGI-TKNNVDYIADKIC 399 (405)
T ss_dssp EGGGC-CTTHHHHHHHHHH
T ss_pred EEecc-CHHHHHHHHHHHH
Confidence 87643 4567888888775
No 470
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.39 E-value=1.9e-05 Score=91.44 Aligned_cols=286 Identities=13% Similarity=0.185 Sum_probs=157.4
Q ss_pred HHHHHHHHHhCCCCcceEEcccHHHHHHHHH-HHhcc--ccC--CCCEEEEcC-CCCHHHHHHHHHhh----cC-----C
Q 002263 103 NFQTMIADLTGLPMSNASLLDEGTAAAEAMA-MCNNI--QKG--KKKTFIIAS-NCHPQTIDICITRA----DG-----F 167 (946)
Q Consensus 103 e~q~~la~L~g~~~~~~sl~~~~Ta~~ea~~-la~~~--~~~--~gd~vvv~~-~~Hps~~~~~~~~a----~~-----~ 167 (946)
++-+.|++++..+...+.+.++||.|.|+++ +|+.+ .++ ++.+||.-. .-|..+...+..-- +. .
T Consensus 115 ~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~ 194 (473)
T 4e3q_A 115 MLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLP 194 (473)
T ss_dssp HHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCT
T ss_pred HHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCC
Confidence 3446788888766566888899999999775 45433 111 345666444 56765554432100 00 1
Q ss_pred CeEEEEecc-------------------ccccc-c----CCCEeEEEEEcC-CCceeecc----hHHHHHHHHhCCcEEE
Q 002263 168 DIKVVVSDL-------------------KDIDY-K----SGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVV 218 (946)
Q Consensus 168 gi~v~~~~~-------------------~~l~~-i----~~~t~~v~v~~p-n~~G~i~d----i~~i~~~a~~~gal~~ 218 (946)
+......|. +++++ + .+++++|++.-- ..-|.+.+ +++|.++|+++|++++
T Consensus 195 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI 274 (473)
T 4e3q_A 195 GFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVI 274 (473)
T ss_dssp TEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEE
T ss_pred cccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEe
Confidence 222211110 12222 1 245677776532 45677653 8999999999999999
Q ss_pred EEecCc-cccCCCCCCCc------c--ceEEEeccccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceE
Q 002263 219 MATDLL-ALTILKPPGEL------G--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 289 (946)
Q Consensus 219 v~a~~~-al~~l~~~~~~------G--aDi~v~s~k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~ 289 (946)
+| ... ++| +.+.+ | .||++ -+|.++ .|+--+|.+.+++++.+.+.... +. ...
T Consensus 275 ~D-EV~tGfG---RtG~~fa~e~~gv~PDi~t-~~K~l~----gG~~Pl~av~~~~~i~~~~~~~~-----~~-~~~--- 336 (473)
T 4e3q_A 275 SD-EVICGFG---RTGNTWGCVTYDFTPDAII-SSKNLT----AGFFPMGAVILGPELSKRLETAI-----EA-IEE--- 336 (473)
T ss_dssp EE-CTTTSSS---TTSSSCHHHHTTCCCSEEE-ECGGGG----TTSSCCEEEEECHHHHHHHHHHH-----HH-HSC---
T ss_pred cc-CccccCC---cccchhHHHhcCCCCChHH-hccccc----CCCCCcccccccHHHHHHhcccc-----cc-ccc---
Confidence 94 332 333 22332 2 58865 358774 23334556677877766542100 00 000
Q ss_pred EecccccccccccccCCCccchHHHHHHHHHH-HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CEE-EcCCCCcC
Q 002263 290 VAMQTREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVE-VQGLPFFD 364 (946)
Q Consensus 290 l~l~tre~~irre~aTsni~t~~~l~a~~aa~-y~~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g---~~~-~~~~~~~~ 364 (946)
...|+.+ +..++ +..+++ -+..+..++ +.+++.++..+|+++|+++. .+. +-+.-.+-
T Consensus 337 -----------~~hg~T~--~Gnpl-a~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl~~ 399 (473)
T 4e3q_A 337 -----------FPHGFTA--SGHPV-GCAIALKAIDVVMNEG---LAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMW 399 (473)
T ss_dssp -----------CCCCCTT--TTCHH-HHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEE
T ss_pred -----------cccCCCC--CCCcc-hhhhhhhhhhhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCeeEEeecceEE
Confidence 0011111 11122 222222 134444444 45566667888888887641 111 10000010
Q ss_pred eEEEe--------cC---C-HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhh
Q 002263 365 TVKVK--------CA---D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAE 430 (946)
Q Consensus 365 ~~~i~--------~~---~-~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~~~~~~~~~~~~~~ 430 (946)
.+-+. .+ . ...+.+.+.++|+.++.. .+.+++++....|++|+|+++++|.. .++++++
T Consensus 400 gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-g~~i~l~PPL~it~~eid~~~~~l~~------al~~v~a 470 (473)
T 4e3q_A 400 ALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL-GQSVVLCPPFILTEAQMDEMFDKLEK------ALDKVFA 470 (473)
T ss_dssp EEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE-TTEEEECCCTTCCHHHHHHHHHHHHH------HHHHHHH
T ss_pred EEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec-CCEEEEeCCCCCCHHHHHHHHHHHHH------HHHHHHH
Confidence 11110 01 1 567899999999998765 46899999999999999999999975 3666654
No 471
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=98.30 E-value=3.8e-05 Score=87.69 Aligned_cols=276 Identities=14% Similarity=0.103 Sum_probs=144.2
Q ss_pred HHHHHHHHHh-CCC--Ccce--EEcccHHHHHHHHH-HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE-EEEe-
Q 002263 103 NFQTMIADLT-GLP--MSNA--SLLDEGTAAAEAMA-MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK-VVVS- 174 (946)
Q Consensus 103 e~q~~la~L~-g~~--~~~~--sl~~~~Ta~~ea~~-la~~~~~~~gd~vvv~~~~Hps~~~~~~~~a~~~gi~-v~~~- 174 (946)
+|++.+++++ |-. ..+. .-+.+||++....+ +..+...++||+|++++-.++.....++. .|.+ +...
T Consensus 91 ~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~----aG~~~V~~~~ 166 (420)
T 4h51_A 91 PFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKA----AGWKNICTYA 166 (420)
T ss_dssp HHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHH----TTCCCEEEEE
T ss_pred HHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHH----cCCeEEEeec
Confidence 3455666654 322 2222 23567776665332 22222123899999999999988877653 3443 3221
Q ss_pred --c-------cccccc----cCCCEeEEEEEcC-CCceeec---chHHHHHHHHhCCcEEEEEecCccccC--CC-CC--
Q 002263 175 --D-------LKDIDY----KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTI--LK-PP-- 232 (946)
Q Consensus 175 --~-------~~~l~~----i~~~t~~v~v~~p-n~~G~i~---di~~i~~~a~~~gal~~v~a~~~al~~--l~-~~-- 232 (946)
+ .+.+.+ ..++++.+++.+| |.+|.+. .+++|+++|++++++++.+.-...+.. .. ++
T Consensus 167 ~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~ 246 (420)
T 4h51_A 167 YYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYA 246 (420)
T ss_dssp CEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred cccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHH
Confidence 1 122222 3456777777777 7899875 688999999999999988532222221 10 00
Q ss_pred ----CCccceE-EEecc-ccccccCCCCCCceEEEEEchhhhhcCCCceEeEeecCCCCcceEEecccccccccccccCC
Q 002263 233 ----GELGADI-VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 306 (946)
Q Consensus 233 ----~~~GaDi-~v~s~-k~lg~P~~~GGP~~g~l~~~~~~~~~lp~~~~G~s~d~~g~~~~~l~l~tre~~irre~aTs 306 (946)
.+.+-.+ ++.|. |.|+.+ |--+|++.+..+..+.+. + .+..-..+.| ...+
T Consensus 247 ~~~~~~~~~~~i~~~s~SK~~~~~----G~RvG~~~~~~~~~~~~~-~-----------------~~~~l~~~~r-~~~s 303 (420)
T 4h51_A 247 ARLFARRGIEVLLAQSFSKNMGLY----SERAGTLSLLLKDKTKRA-D-----------------VKSVMDSLIR-EEYT 303 (420)
T ss_dssp HHHHHHTTCCCEEEEECTTTSCCG----GGCEEEEEEECSCHHHHH-H-----------------HHHHHHHHHH-TTTS
T ss_pred HHhHHhhCceEEEEeccccccccc----cCceEEEEecccCHHHHH-H-----------------HHHHHHHhhh-cccC
Confidence 0122233 44454 888643 234788776543322110 0 0000000111 1112
Q ss_pred CccchHHHHHHHHHHHH-----HHhChhhHHHHHHHHHHHHHHHHHHHhcCCCEEE----cCCCCcCeEEEecCCHHHHH
Q 002263 307 NICTAQALLANMAAMYA-----VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV----QGLPFFDTVKVKCADAHAIA 377 (946)
Q Consensus 307 ni~t~~~l~a~~aa~y~-----~~~g~~Gl~~i~~~~~~~a~~l~~~L~~~g~~~~----~~~~~~~~~~i~~~~~~~v~ 377 (946)
|.. ...+.+++..+ ...-.+-++.+.+++.+..+.|.+.|+++| ... +..+ ..-|++ .+-..+.+
T Consensus 304 ~~p---~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g-~~~~~~~i~~q-~GmF~~-~gls~e~v 377 (420)
T 4h51_A 304 CPP---AHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQ-TPGSWEHVINQ-IGMFSF-LGLSKAQC 377 (420)
T ss_dssp SCC---HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CSSCCTHHHHC-CSSEEE-CCCCHHHH
T ss_pred cch---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeecCC-CceEEe-cCcCHHHH
Confidence 222 11111111111 111123456778888888899999999886 211 1000 011333 11123456
Q ss_pred HHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 002263 378 SAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 416 (946)
Q Consensus 378 ~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~ 416 (946)
+.|+++||++-. ++ |||+.- -+++.|+.+.+++.
T Consensus 378 ~~L~e~~Vy~~~--~g--Ris~Ag-l~~~ni~~~a~aI~ 411 (420)
T 4h51_A 378 EYCQNHNIFITV--SG--RANMAG-LTHETALMLAQTIN 411 (420)
T ss_dssp HHHHHTTEECCT--TC--EEEGGG-CCHHHHHHHHHHHH
T ss_pred HHHHhCCEEEcC--CC--EEEecc-CCHHHHHHHHHHHH
Confidence 788999997642 33 888764 46788998888875
No 472
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.94 E-value=0.00027 Score=87.41 Aligned_cols=44 Identities=14% Similarity=0.055 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 373 AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 ~~~v~~~L~~~GI~~~~~~~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+.++.++|.++||.++.. .+.||++++..+|++||++++++|..
T Consensus 780 a~~~~~~l~e~Gv~v~p~-g~~lrl~pp~~~t~e~id~~~~~l~~ 823 (831)
T 4a0g_A 780 AKSLLIMLREDGIFTRPL-GNVIYLMCGPCTSPEICRRLLTKLYK 823 (831)
T ss_dssp HHHHHHHHHHTTEECCCB-TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEec-CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 567999999999999865 57999999999999999999999963
No 473
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=31.97 E-value=80 Score=35.06 Aligned_cols=114 Identities=15% Similarity=0.087 Sum_probs=62.1
Q ss_pred HHHHHHHhhCCCcccccCCchHHHHHHHHHHHHHHHH-hcCCCCCCEE-EEcCCCCCCCHHHHH-------HcCCEEEEE
Q 002263 525 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHK-ARGDHHRNVC-IIPVSAHGTNPATAA-------MCGMKIVSV 595 (946)
Q Consensus 525 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~a~r~y~~-~~G~~~~~~I-li~~saHg~~~~~a~-------~~G~~vv~v 595 (946)
+++++.++.+++...+.|.=|.-=....-..+..|.+ +++....++| |+-.|.||.....|+ -.|++++.+
T Consensus 221 v~~~L~kl~~Ldi~~I~P~HGpi~r~~~~~ii~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~ 300 (410)
T 4dik_A 221 ILEGAEKLSSLKIKALLPGHGLIWKKDPQRLLNHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVY 300 (410)
T ss_dssp HHHHHHHHHTSCCSEEEESSSCBBSSCHHHHHHHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCCCCEEecCCcchhhcCHHHHHHHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEEE
Confidence 3455666666665434443332100001122334432 3333333344 556888887765432 368888876
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHH
Q 002263 596 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICK 642 (946)
Q Consensus 596 ~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ 642 (946)
.+.+.-..|+.++.+.+ .+-.+|++-.|+..|-+.|+++.+..
T Consensus 301 ~~~d~~~~~~s~i~~~i----~~~~~ivlGspT~~~~~~p~~~~~l~ 343 (410)
T 4dik_A 301 KFSDEERPAISEILKDI----PDSEALIFGVSTYEAEIHPLMRFTLL 343 (410)
T ss_dssp EECSSCCCCHHHHHHHS----TTCSEEEEEECCTTSSSCHHHHHHHH
T ss_pred EeccCCCCCHHHHHHHH----HhCCeEEEEeCCcCCcCCHHHHHHHH
Confidence 65443456788776666 35567888889866655445655443
No 474
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=29.36 E-value=4.3e+02 Score=26.14 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=45.5
Q ss_pred HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcC----CEEEEec
Q 002263 585 AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNG----GQVYMDG 655 (946)
Q Consensus 585 a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g----~ll~vD~ 655 (946)
.+..|++|+.+..+ +.++++-+++.+++++..++..+.-.++ ..+ .++++.+.+++.| +.+++=|
T Consensus 116 l~~~G~~Vi~LG~~----vp~e~iv~~~~~~~~d~v~l~~S~l~~~-~~~-~~~~~i~~l~~~~~~~~v~v~vGG 184 (215)
T 3ezx_A 116 LGANGFQIVDLGVD----VLNENVVEEAAKHKGEKVLLVGSALMTT-SML-GQKDLMDRLNEEKLRDSVKCMFGG 184 (215)
T ss_dssp HHHTSCEEEECCSS----CCHHHHHHHHHHTTTSCEEEEEECSSHH-HHT-HHHHHHHHHHHTTCGGGSEEEEES
T ss_pred HHHCCCeEEEcCCC----CCHHHHHHHHHHcCCCEEEEEchhcccC-cHH-HHHHHHHHHHHcCCCCCCEEEEEC
Confidence 56799999988764 7899998888877777655522543332 333 5888888888876 4666633
No 475
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=28.17 E-value=1.3e+02 Score=28.59 Aligned_cols=61 Identities=13% Similarity=0.135 Sum_probs=41.9
Q ss_pred HHHcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEeCCCcccccccCHHHHHHHHHHcC---CEEEE
Q 002263 585 AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNG---GQVYM 653 (946)
Q Consensus 585 a~~~G~~vv~v~~~~~g~~D~e~L~~~i~~~~~~t~~vvvt~Pn~~G~~~~~i~~I~~ia~~~g---~ll~v 653 (946)
.+..|++|+.+..+ +.++++.+++.+++++..++..+. + ...+ .++++.+.+++.| +.+++
T Consensus 42 l~~~G~eVi~lG~~----~p~e~lv~aa~~~~~diV~lS~~~--~-~~~~-~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 42 LRDAGFEVVYTGLR----QTPEQVAMAAVQEDVDVIGVSILN--G-AHLH-LMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp HHHTTCEEECCCSB----CCHHHHHHHHHHTTCSEEEEEESS--S-CHHH-HHHHHHHHHHHTTCTTSCEEE
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHhcCCCEEEEEeec--h-hhHH-HHHHHHHHHHhcCCCCCEEEE
Confidence 45689999887653 689999999987666765554432 2 2233 5888888888865 45555
No 476
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=23.87 E-value=69 Score=33.27 Aligned_cols=99 Identities=18% Similarity=0.172 Sum_probs=58.3
Q ss_pred CCEEEE---cCCCCHHHHHHHHHh--------hcCC-CeEEEEe----ccccccc--cCCCEeEEEEEcCCCce--eecc
Q 002263 143 KKTFII---ASNCHPQTIDICITR--------ADGF-DIKVVVS----DLKDIDY--KSGDVCGVLVQYPGTEG--EVLD 202 (946)
Q Consensus 143 gd~vvv---~~~~Hps~~~~~~~~--------a~~~-gi~v~~~----~~~~l~~--i~~~t~~v~v~~pn~~G--~i~d 202 (946)
+.+||+ ....|---...+... .+.. |++++.+ +.+++-+ ...+..+|.++.-.+.+ .+..
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~ 199 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVTQKNVHIQN 199 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEEeecCCccchHHH
Confidence 345654 336775444555444 4567 9999874 4455533 23344556555433333 5667
Q ss_pred hHHHHHHHHhCC----cEEEEEecCccccCCCCCCCccceEEEecc
Q 002263 203 YGDFIKNAHANG----VKVVMATDLLALTILKPPGELGADIVVGSA 244 (946)
Q Consensus 203 i~~i~~~a~~~g----al~~v~a~~~al~~l~~~~~~GaDi~v~s~ 244 (946)
++++.+.+++.| +.++||-....... ..++|+|.++..+
T Consensus 200 ~~~~i~~L~~~g~~~~i~vivGG~~~~~~~---a~~iGad~~~~da 242 (262)
T 1xrs_B 200 MTHLIELLEAEGLRDRFVLLCGGPRINNEI---AKELGYDAGFGPG 242 (262)
T ss_dssp HHHHHHHHHHTTCGGGSEEEEECTTCCHHH---HHTTTCSEEECTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCcCCHHH---HHHcCCeEEECCc
Confidence 899999999877 77888432211111 2467999988776
No 477
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=23.47 E-value=5.7e+02 Score=26.78 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=48.4
Q ss_pred CCEEEEcCCCCCCCHHHHHHcCCEEEEEc-CCCCCCCCHHHHHHHHHhcCC-CeEEEEEeCCCcccccccCHHHHHHHHH
Q 002263 568 RNVCIIPVSAHGTNPATAAMCGMKIVSVG-TDAKGNINIEELRKAAEANRD-NLSTLMVTYPSTHGVYEEGIDEICKIIH 645 (946)
Q Consensus 568 ~~~Ili~~saHg~~~~~a~~~G~~vv~v~-~~~~g~~D~e~L~~~i~~~~~-~t~~vvvt~Pn~~G~~~~~i~~I~~ia~ 645 (946)
+..+++ .|..+...++.+|++++.+. ..++....+.+|.+.++..++ ++.+|++ .|++ +-+-+..|++
T Consensus 190 ~~~~v~---~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~-e~~~------~~~~~~~ia~ 259 (312)
T 2o1e_A 190 KKEFIT---QHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYF-EEIA------SSKVADTLAS 259 (312)
T ss_dssp CCEEEE---SSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEEC-SSCC------CHHHHHHHHH
T ss_pred CCEEEE---ECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEE-eCCC------ChHHHHHHHH
Confidence 445665 58788888999999987663 334456778888888765443 4555554 3432 1244455678
Q ss_pred HcCCEE
Q 002263 646 DNGGQV 651 (946)
Q Consensus 646 ~~g~ll 651 (946)
+.|+.+
T Consensus 260 e~g~~v 265 (312)
T 2o1e_A 260 EIGAKT 265 (312)
T ss_dssp HTCCEE
T ss_pred HhCCcE
Confidence 888875
No 478
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=21.28 E-value=6e+02 Score=26.46 Aligned_cols=59 Identities=22% Similarity=0.147 Sum_probs=34.5
Q ss_pred EEeCCCcccccccCHHHHHHHHHHcC--CEEEEecccccccccccCC------CccCCCEEEeCCCcccccCCCC
Q 002263 623 MVTYPSTHGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLTSP------GYIGADVCHLNLHKTFCIPHGG 689 (946)
Q Consensus 623 vvt~Pn~~G~~~~~i~~I~~ia~~~g--~ll~vD~a~~~a~~gl~~p------g~~GaDi~~~s~hK~f~~P~g~ 689 (946)
++|........+ .++.|.++++..+ +.+.++| |+..- ...|++-+|+|..+|...++.+
T Consensus 183 ILTSG~~~~a~~-Gl~~Lk~Lv~~a~~rI~ImaGG-------GV~~~Ni~~l~~~tG~~~~H~S~~~~~~s~m~~ 249 (287)
T 3iwp_A 183 VLTSGCDSSALE-GLPLIKRLIEQAKGRIVVMPGG-------GITDRNLQRILEGSGATEFHCSARSTRDSGMKF 249 (287)
T ss_dssp EEECTTSSSTTT-THHHHHHHHHHHTTSSEEEECT-------TCCTTTHHHHHHHHCCSEEEECCEEEECCSCSS
T ss_pred EECCCCCCChHH-hHHHHHHHHHHhCCCCEEEECC-------CcCHHHHHHHHHhhCCCEEeECcCcccCCcccc
Confidence 344443333444 6888888888766 6666653 22111 1258999999885555444333
No 479
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=20.53 E-value=1.2e+02 Score=24.70 Aligned_cols=45 Identities=16% Similarity=0.099 Sum_probs=36.9
Q ss_pred HHHHHHHHHHcCCeeeeec-CCeEEEEeccCCCHHHHHHHHHHHhC
Q 002263 373 AHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFAG 417 (946)
Q Consensus 373 ~~~v~~~L~~~GI~~~~~~-~~~lris~~~~~t~edid~ll~~l~~ 417 (946)
+..+.++|...|+...... ....|+-++.+.+.++.+++++.|+.
T Consensus 23 A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~ 68 (79)
T 1x60_A 23 ADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKN 68 (79)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 7889999998898654432 45679999999999999999998874
No 480
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.30 E-value=4.6e+02 Score=27.12 Aligned_cols=77 Identities=13% Similarity=0.186 Sum_probs=45.6
Q ss_pred CCCEEEEcCCCCCCCHHHHHHcCCEEEEEc-CCCCCCCCHHHHHHHHHhcC-CCeEEEEEeCCCcccccccCHHHHHHHH
Q 002263 567 HRNVCIIPVSAHGTNPATAAMCGMKIVSVG-TDAKGNINIEELRKAAEANR-DNLSTLMVTYPSTHGVYEEGIDEICKII 644 (946)
Q Consensus 567 ~~~~Ili~~saHg~~~~~a~~~G~~vv~v~-~~~~g~~D~e~L~~~i~~~~-~~t~~vvvt~Pn~~G~~~~~i~~I~~ia 644 (946)
++..+++ .|..+...++.+|++++.+. +.++....+.+|.+.++..+ .++.+|++. |++ . -+-+..++
T Consensus 178 ~~~~~v~---~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~----~--~~~~~~la 247 (286)
T 3gi1_A 178 RSKTFVT---QHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAE-DNV----N--PKIAHAIA 247 (286)
T ss_dssp SCCEEEE---EESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEEC-TTS----C--THHHHHHH
T ss_pred CCCEEEE---ECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCC----C--hHHHHHHH
Confidence 3445655 57788888999999988764 33344555666665554322 466667664 332 1 13334567
Q ss_pred HHcCCEEEE
Q 002263 645 HDNGGQVYM 653 (946)
Q Consensus 645 ~~~g~ll~v 653 (946)
++.|+.+.+
T Consensus 248 ~~~g~~v~~ 256 (286)
T 3gi1_A 248 KSTGAKVKT 256 (286)
T ss_dssp HTTTCEEEE
T ss_pred HHhCCeEEE
Confidence 888887654
Done!