Your job contains 1 sequence.
>002266
MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHH
RDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAA
AGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGREL
HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI
CFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMG
KYGVWESVVPSSMKSPTEDIPSSRSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMP
SRKRLRKQTVFDEDLDEEVNDELNLFPKTESRKKAHSTHKEYSDKGNGSRSMRTSTRKNM
QEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVPSMTDYFGF
TMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEGEEVKAVALGTAWVAA
VTSLNFLRIFTEGGFQDQLAVVTHVSDCDQMLEFRVFNIAKGTEPLKGRLPLTPGSQLTW
FGFSEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKDKKSDENYWIVGLNASKLFCIVC
KNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNNFHLSQIPKRMEEVTDAGL
DTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTKLK
LPNLAERFNSILEERLLSETKETPNTTLLISNNNVTARGDVDVSKASTSTERSEMVEPIV
PSVKFSLPIFKKKVKSPEEIKLGNEPTIQNQKAKVDNNREVKGIEDNNAGAVTKVEKTKI
QSQHPPNVFFKSSNNQENTNKAGEVNQSQPQRPSPSNPFFKSSIK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002266
(945 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096489 - symbol:AT3G42660 "AT3G42660" species... 1913 1.7e-295 2
ZFIN|ZDB-GENE-030131-1665 - symbol:wdhd1 "WD repeat and H... 399 1.0e-69 3
UNIPROTKB|E1BUU5 - symbol:WDHD1 "Uncharacterized protein"... 488 1.3e-64 3
MGI|MGI:2443514 - symbol:Wdhd1 "WD repeat and HMG-box DNA... 494 1.7e-64 3
UNIPROTKB|O75717 - symbol:WDHD1 "WD repeat and HMG-box DN... 478 5.0e-63 3
UNIPROTKB|E1B7F5 - symbol:WDHD1 "Uncharacterized protein"... 471 2.4e-62 3
UNIPROTKB|I3L908 - symbol:WDHD1 "Uncharacterized protein"... 319 8.8e-60 4
RGD|1310200 - symbol:Wdhd1 "WD repeat and HMG-box DNA bin... 519 8.2e-56 2
POMBASE|SPAPB1E7.02c - symbol:mcl1 "DNA polymerase alpha ... 444 6.7e-54 2
UNIPROTKB|C9JW18 - symbol:WDHD1 "WD repeat and HMG-box DN... 390 2.3e-53 3
UNIPROTKB|G4MNU5 - symbol:MGG_06969 "Minichromosome loss ... 469 4.9e-51 2
ASPGD|ASPL0000031843 - symbol:sepB species:162425 "Emeric... 272 8.2e-50 3
UNIPROTKB|F1SSP1 - symbol:WDHD1 "Uncharacterized protein"... 319 6.6e-41 2
FB|FBgn0033890 - symbol:Ctf4 species:7227 "Drosophila mel... 239 2.8e-33 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 301 1.4e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 258 5.7e-21 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 258 5.7e-21 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 258 5.7e-21 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 258 5.7e-21 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 258 5.7e-21 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 254 1.5e-20 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 250 4.1e-20 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 237 1.3e-17 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 240 1.7e-17 1
SGD|S000006339 - symbol:CTF4 "Chromatin-associated protei... 181 2.5e-17 4
WB|WBGene00008921 - symbol:F17C11.10 species:6239 "Caenor... 170 5.1e-17 3
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 227 3.2e-15 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 226 3.3e-15 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 217 4.6e-15 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 220 5.1e-15 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 220 5.1e-15 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 227 1.9e-14 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 215 2.8e-14 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 219 6.3e-14 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 208 6.5e-14 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 208 1.9e-13 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 204 4.7e-13 1
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 205 9.0e-13 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 196 9.1e-13 1
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 208 9.1e-13 1
DICTYBASE|DDB_G0282793 - symbol:wdr61 "WD40 repeat-contai... 195 1.1e-12 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 197 1.1e-12 1
UNIPROTKB|C9JLV4 - symbol:APAF1 "Apoptotic protease-activ... 208 1.1e-12 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 202 1.6e-12 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 195 1.6e-12 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 203 2.3e-12 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 202 2.7e-12 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 202 3.0e-12 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 199 3.2e-12 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 196 3.4e-12 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 201 3.8e-12 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 201 3.8e-12 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 197 4.3e-12 1
UNIPROTKB|C9JYB3 - symbol:WDHD1 "WD repeat and HMG-box DN... 175 4.3e-12 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 199 6.2e-12 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 193 7.4e-12 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 195 7.6e-12 1
CGD|CAL0000499 - symbol:orf19.6247 species:5476 "Candida ... 141 9.2e-12 3
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 198 1.0e-11 1
UNIPROTKB|Q4R8H1 - symbol:TBL1X "F-box-like/WD repeat-con... 194 1.2e-11 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 188 1.2e-11 1
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 198 1.5e-11 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 189 1.5e-11 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 195 1.6e-11 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 187 1.6e-11 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 188 2.0e-11 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 185 2.0e-11 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 189 2.1e-11 1
TAIR|locus:2123929 - symbol:VIP3 "AT4G29830" species:3702... 185 2.6e-11 1
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 184 2.6e-11 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 184 2.6e-11 1
UNIPROTKB|J9JHP3 - symbol:APAF1 "Apoptotic protease-activ... 195 3.0e-11 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 193 3.5e-11 1
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 188 3.7e-11 2
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 208 4.4e-11 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 189 4.5e-11 1
UNIPROTKB|Q9NYS7 - symbol:WSB2 "WD repeat and SOCS box-co... 185 5.6e-11 1
UNIPROTKB|F1RKG5 - symbol:WSB2 "Uncharacterized protein" ... 185 5.6e-11 1
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 188 5.7e-11 1
UNIPROTKB|F5H280 - symbol:WSB2 "WD repeat and SOCS box-co... 185 5.7e-11 1
UNIPROTKB|Q0V8J1 - symbol:WSB2 "WD repeat and SOCS box-co... 185 5.7e-11 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 190 5.8e-11 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 188 6.0e-11 1
UNIPROTKB|B4DIE6 - symbol:WSB2 "cDNA FLJ59692, highly sim... 185 6.2e-11 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 181 6.7e-11 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 183 7.2e-11 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 181 7.3e-11 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 186 7.8e-11 1
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 185 7.8e-11 2
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 185 7.8e-11 2
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 185 7.8e-11 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 183 9.5e-11 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 186 9.6e-11 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 179 1.0e-10 1
UNIPROTKB|E1BGS8 - symbol:ATG16L1 "Uncharacterized protei... 136 1.1e-10 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 184 1.1e-10 1
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 204 1.2e-10 2
MGI|MGI:2144041 - symbol:Wsb2 "WD repeat and SOCS box-con... 182 1.2e-10 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 184 1.2e-10 1
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 178 1.3e-10 1
WARNING: Descriptions of 697 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2096489 [details] [associations]
symbol:AT3G42660 "AT3G42660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016458 "gene silencing" evidence=RCA] [GO:0016570 "histone
modification" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K11274 OMA:REYHFED InterPro:IPR022100
Pfam:PF12341 IPI:IPI00531156 RefSeq:NP_189852.2 UniGene:At.66552
ProteinModelPortal:F4JF14 SMR:F4JF14 PRIDE:F4JF14
EnsemblPlants:AT3G42660.1 GeneID:823286 KEGG:ath:AT3G42660
ArrayExpress:F4JF14 Uniprot:F4JF14
Length = 953
Score = 1913 (678.5 bits), Expect = 1.7e-295, Sum P(2) = 1.7e-295
Identities = 374/568 (65%), Positives = 436/568 (76%)
Query: 1 MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPK-ILRH 59
MK RS+KLREAHK G +A+FCSILWD +A H VT+SSS+ +IS+HD L S LP ILRH
Sbjct: 1 MKSRSLKLREAHKVGGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRH 60
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H+DGVT+LALS +ST LASGSIDH VKLYKFP GEFQTNITRFTLPIRVLAFN SGS+LA
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLA 120
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AAGDDEGIKLINT DGSI RVLKGHKGPVTGL F PN E LASID+ GTV+ WELQ+G
Sbjct: 121 AAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVV 180
Query: 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP 239
LK VAPD G + S +N+ WSPDG TLAVPGL+NDVVMYDR T EKLF+LRGDH++
Sbjct: 181 SFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEA 240
Query: 240 ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVM 299
IC+L+W+PNGKY+ATS LD+Q+L+WDV KK DIDR KF++RICCM+WKP GNAL+VID
Sbjct: 241 ICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKPNGNALSVIDAK 300
Query: 300 GKYGVWESVVPSSMKSPTEDIPSS-RSNYNGLLLFDEEEKEP--STSGSLSD-LGEDSHG 355
G+YGVWES+VPSSM SPT +P N +L FD+E +E S SL D +G+ G
Sbjct: 301 GRYGVWESLVPSSMLSPTVGVPDIVPKKRNEILDFDDEVEEEIYRASESLDDAMGDSDDG 360
Query: 356 ESEMPSRKRLRKQTXXXXXXXXXXXXXX--XXXPK-TESRKKAHSTHKEYSDKGNGS-RS 411
ES SRKRLRK+T P +E RKK+H H+E +G+ +
Sbjct: 361 ESHHTSRKRLRKKTLIDEDVDDAYEELNDGSSLPSASEYRKKSHRGHREKQGARSGAFKG 420
Query: 412 MRTSTRKNMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRV 471
+ ST+ MQ +FQPGATP +PGKR FLCYNMLG ITT+EH+G S IE DFHDTGRGPRV
Sbjct: 421 ISASTKYKMQSSFQPGATPPEPGKRTFLCYNMLGCITTIEHEGNSRIETDFHDTGRGPRV 480
Query: 472 PSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEGEEVKAV 531
SM D +GFTMAS+NE G VFANPCKGEKNMS LMYRPF SWA+NSEW+MRFEGEEVK V
Sbjct: 481 SSMIDIYGFTMASINETGCVFANPCKGEKNMSVLMYRPFRSWASNSEWTMRFEGEEVKVV 540
Query: 532 ALGTAWVAAVTSLNFLRIFTEGGFQDQL 559
A G+ WVAAVTSLN LR+F+EGG Q +
Sbjct: 541 ANGSGWVAAVTSLNLLRVFSEGGLQKHI 568
Score = 948 (338.8 bits), Expect = 1.7e-295, Sum P(2) = 1.7e-295
Identities = 193/379 (50%), Positives = 263/379 (69%)
Query: 549 IFTEGGFQDQLAVVTHVSDC----DQMLEFRVFNIAKGTEPLKGRLPLTPGSQLTWFGFS 604
+ T G +D LAVVTHVSDC +Q++EFRVFNI+K T+ LKGR+ LTPGS+LTW GFS
Sbjct: 575 VVTAVGCKDHLAVVTHVSDCLPSNEQVMEFRVFNISKMTQELKGRVALTPGSRLTWIGFS 634
Query: 605 EEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKDKKSDENYWIVGLNASKLFCIVCKNPD 664
EEG LSSYDS+G+LRV+T+ YGGSW+P+FS SK+KK +ENYW+VGLN S L+CI CK +
Sbjct: 635 EEGSLSSYDSEGVLRVFTSQYGGSWIPVFSTSKEKKQEENYWVVGLNTSSLYCIACKYAE 694
Query: 665 LFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNNFHLSQIPKRMEEVTDAGLDTSS 724
+FPQV PKP+LT+LDLS PLASSDLGA +LENE ++ L + ++++++ G+DT++
Sbjct: 695 MFPQVTPKPILTILDLSLPLASSDLGAASLENELILKQLRLYETQRKVDDMALVGVDTTA 754
Query: 725 LDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTKLKLPNL 784
L+DEAF+LE +QD+CILRLI+SCC+ D RA+EL++LL+L+KSM+ AI LVTKLKLP L
Sbjct: 755 LEDEAFDLEVSQDKCILRLISSCCSSDSFARASELMELLTLEKSMRAAITLVTKLKLPFL 814
Query: 785 AERFNSILEERLLSETKETPNTTLLIS-NNNVTARGDVDVSKASTSTERSEMVEPIVPS- 842
AE+F+SILEERLL E E T ++ N V R + V S + SE E ++ S
Sbjct: 815 AEKFSSILEERLLEEASEAAVTNPALNPNGEVVTRVESKVQNPPASIQTSENTEAVMKSS 874
Query: 843 -VKFSLPIFKKKVKSPEEIKLGNEPTIQNQKAKVDNNREVKGIE----DNNAGAVTKVEK 897
K S P KK K E +KLG E T + K+ +E+K + NN K ++
Sbjct: 875 ATKLSAPTLLKKSKVSEGLKLGKEQT-KKDKSDDAKIKEIKKLNLKNPVNNVNKEDKGQE 933
Query: 898 TKI---QSQHPPNVFFKSS 913
++ +++ N F KS+
Sbjct: 934 KEVNQGEARRSSNPFLKST 952
Score = 47 (21.6 bits), Expect = 3.5e-200, Sum P(2) = 3.5e-200
Identities = 24/83 (28%), Positives = 35/83 (42%)
Query: 866 PTIQNQKAKVDNNREVKGIE----DNNAGAVTKVEKTKIQSQHPPNVFFKSSNNQENTNK 921
PT+ +K+KV ++ G E D + A K E K+ ++P N K QE
Sbjct: 881 PTLL-KKSKVSEGLKL-GKEQTKKDKSDDAKIK-EIKKLNLKNPVNNVNKEDKGQEKEVN 937
Query: 922 AGEVNXXXXXXXXXXNPFFKSSI 944
GE NPF KS++
Sbjct: 938 QGEARRSS-------NPFLKSTV 953
>ZFIN|ZDB-GENE-030131-1665 [details] [associations]
symbol:wdhd1 "WD repeat and HMG-box DNA binding
protein 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR009071 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF00505 ZFIN:ZDB-GENE-030131-1665
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00390000002030 KO:K11274
InterPro:IPR022100 Pfam:PF12341 InterPro:IPR013979 Pfam:PF08662
CTD:11169 EMBL:CU464134 IPI:IPI00919874 RefSeq:NP_001002726.2
UniGene:Dr.52170 Ensembl:ENSDART00000110507
Ensembl:ENSDART00000133710 GeneID:436999 KEGG:dre:436999
NextBio:20831417 Uniprot:E7F296
Length = 1112
Score = 399 (145.5 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 106/337 (31%), Positives = 181/337 (53%)
Query: 9 REAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALA 68
R+ + G++ + +D Q +VT S + + I + L + PK + + + V ++A
Sbjct: 5 RKPMRYGHSEGHTDVCFDDQGKCIVTCGS-DGDVRIWESLDDDD-PKSI-NVGEKVYSVA 61
Query: 69 LSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128
L N + + S +++V+++ FP GE +TRFT + FN SGS +AA D +K
Sbjct: 62 LK-NGKLVTAVS-NNTVQIHTFPDGEPDGILTRFTTNANHVTFNNSGSRVAAGSSDFLVK 119
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK--RV 186
++ D S + L+GH PV +A DP+ E+LAS G+V W ++S ++ K +
Sbjct: 120 MVEVADSSQQKTLRGHDAPVLSVALDPSDEFLASSSCDGSVAVWSIESQTQVAQWKVLQK 179
Query: 187 APDIGSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLS 244
+ D+ ++ S+ L+W P G+ +AVP + + +Y+R+T + +L D + Q + +
Sbjct: 180 SSDV-TNAKSLCRLAWQPRSGKLIAVP-VDLTIQLYERNTWTHVSTLSDDLITQVVNVVV 237
Query: 245 WSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGKY 302
WSP GK++A ++ +LIWDV KL IDRQK + +C MAW P G +A D G
Sbjct: 238 WSPCGKFLAAGTVGGNLLIWDVEAKLCIDRQKHEKGFTVCGMAWHPSGGRIAYTDTEGCL 297
Query: 303 GVWESVVPSS--MKSPTEDIPSSRSNYNGLLLFDEEE 337
G+ E V SS ++S ++Y+ L FDE++
Sbjct: 298 GLLEGVSSSSSTVQSSKATAAKEANDYDDL--FDEDD 332
Score = 234 (87.4 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 84/329 (25%), Positives = 150/329 (45%)
Query: 554 GFQDQLAVVTHVS---DCDQMLEFRVFNIA-KGTEPLKGR-LPLTPGSQLTWFGFSEEGQ 608
G +QL + H D +Q L ++ + K + + G LPL+ S L W GFS EG
Sbjct: 573 GHGEQLLIAYHRGTGFDGEQALGVQLLQLGRKKRQVIHGEPLPLSRKSYLAWMGFSAEGT 632
Query: 609 LSSYDSKGILRVYTNLYGGSWLPIFSASKDKKS-DENYWIVGL--NASKLFCIVCKNPDL 665
DS+G++R+ G +W P+ + + KS ++YW+VG+ N +L CI CK
Sbjct: 633 PCCVDSEGVVRLLNRTLGNTWTPVCNTRETCKSKSDHYWVVGVHENPQQLRCIPCKGAR- 691
Query: 666 FPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNN-FHLSQIPKRMEEVTDAGLDTSS 724
FP +P+P + +L + P + +E ++ + FH ++ +G + S
Sbjct: 692 FPPTLPRPAVAVLPFNMPYCQTTTEKGQMEEQYWRSMLFH-----NHYGFLSSSGYEIDS 746
Query: 725 LDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTKLKLPNL 784
+ +A E Q ++++ A C ++ R EL +L++ + AI+ ++ + L
Sbjct: 747 -ESQA-QAEKEQQELLMKMFALSCKLEREFRCVELAELMT-HSVVTLAIRYASRSRRMAL 803
Query: 785 AERFNSI-LEE--RLLSETKETPNTTL---LISNNNVTAR------G--DVDVSKASTST 830
A+R + + LE+ +L E +E +N + +R G + +V +
Sbjct: 804 AQRLSELALEKANQLQEEEQEDEEPAYQREYRESNQMNSRQAQQENGCEEEEVEEEEYPQ 863
Query: 831 ERSEMVEPIVPSVKFSLPIFKKKVKSPEE 859
E E + K L FKK KSPE+
Sbjct: 864 EEQMDAEESTETRKKFLNPFKKGGKSPEK 892
Score = 212 (79.7 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 52/159 (32%), Positives = 84/159 (52%)
Query: 421 QEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVPSMTDYFGF 480
Q AFQPG+TP RF+ +N +G + D + I+++FHDT + +T+ G
Sbjct: 425 QRAFQPGSTPAHL-MHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAIHHAM-HLTNTLGH 482
Query: 481 TMASLNENGSVFANPCKGEKNM-STLMYRPFSSWANNSEWSMRF-EGEEVKAVALGTAWV 538
TMA L++ + A C+G + S + FS W + +W + +GE+V+A+ LG W
Sbjct: 483 TMADLSQEAVLLA--CEGTDELASKIQCLHFSCWDTHKDWMVDLPKGEDVRALCLGQGWA 540
Query: 539 AAVTSLNFLRIFTEGGFQDQL-----AVVTHVSDCDQML 572
A TS +R+F+ GG Q ++ AVV +Q+L
Sbjct: 541 AVATSALMVRLFSIGGVQKEIFSLPGAVVCMAGHGEQLL 579
Score = 54 (24.1 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 8 LREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHH-RDGVTA 66
L+++ NA S C + W ++ L+ A + TI +++ +++ + V
Sbjct: 177 LQKSSDVTNAKSLCRLAWQPRSGKLI-AVPVDLTIQLYERNTWTHVSTLSDDLITQVVNV 235
Query: 67 LALSPNSTCLASGSIDHSVKLYKFPGG---EFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
+ SP LA+G++ ++ ++ + Q + FT + +A++ SG +A D
Sbjct: 236 VVWSPCGKFLAAGTVGGNLLIWDVEAKLCIDRQKHEKGFT--VCGMAWHPSGGRIAYT-D 292
Query: 124 DEG-IKLINTIDGSIARV 140
EG + L+ + S + V
Sbjct: 293 TEGCLGLLEGVSSSSSTV 310
Score = 38 (18.4 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 525 GEEVKAVALGTAWVAAVTSLNFLRIFT 551
GE+V +VAL + S N ++I T
Sbjct: 54 GEKVYSVALKNGKLVTAVSNNTVQIHT 80
>UNIPROTKB|E1BUU5 [details] [associations]
symbol:WDHD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0033044 "regulation
of chromosome organization" evidence=IEA] [GO:0070063 "RNA
polymerase binding" evidence=IEA] [GO:0070829 "heterochromatin
maintenance" evidence=IEA] InterPro:IPR009071 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Pfam:PF00505 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00390000002030 InterPro:IPR022100
Pfam:PF12341 InterPro:IPR013979 Pfam:PF08662 OMA:MLKTGSS
EMBL:AADN02003980 IPI:IPI00578058 ProteinModelPortal:E1BUU5
Ensembl:ENSGALT00000019920 NextBio:20826014 Uniprot:E1BUU5
Length = 1123
Score = 488 (176.8 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 150/567 (26%), Positives = 262/567 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + +D +VT S + + I + L + PK + G A + + +
Sbjct: 11 GHTEGHTDVCFDDSGSCIVTCGS-DGDVRIWENLDDDD-PKSINV---GEKAYSCALKNG 65
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L + +++V+++ FP G +TRFT+ + FN G+ +AA D +K++ D
Sbjct: 66 KLITAVSNNTVQIHTFPEGAPDGILTRFTMNANHVVFNSDGAKIAAGSSDFMVKVVEVAD 125
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN--LKRVAPDIGS 192
S + +GH PV L+FDP YLAS G+V W+++ + N L + D+
Sbjct: 126 SSKQKTFRGHDAPVLSLSFDPMDIYLASASCDGSVRVWKVEDQTCVTNWLLLQKCNDV-I 184
Query: 193 DPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLSWSPNGK 250
+ S+ L+W P G+ LA+P + V +Y R+T + L + QP+ + WSP G+
Sbjct: 185 NAKSICRLAWQPGSGKLLAIP-VDKVVKLYRRETWDNQVDLSDTSITQPLNVVVWSPCGQ 243
Query: 251 YMATSSLDRQILIWDVGKKLDIDRQKFDDR--ICCMAWKPIGNALAVIDVMGKYGVWESV 308
Y+A S++ I++W V + +R K + IC +AW P +A D G G+WE +
Sbjct: 244 YLAAGSVNGSIVVWKVETRECTERMKHEKSYSICGLAWHPRYEQIAYTDTEGNLGLWEDI 303
Query: 309 VPSSMKSPTEDIPSS-RSNYNGLLLFDEEEK------EPSTSGSLSDLGEDSHGESE--M 359
K P + + S+ +Y L D+++ EP +S + + ED HG+ + M
Sbjct: 304 --GDGKKPNDKVASTVTKDYEDLFDGDDDDYLNGDMIEPPSSPN-TGANED-HGDDDDLM 359
Query: 360 PSRKRLRKQTXXXXXXXXXXXXXXXXXPKTESRKKAHSTHKEYSDKGNGS--RSMRTSTR 417
P+ R+ E + + S + R
Sbjct: 360 PTSGHPRRAIIDDDDNSLDIGMIKANSNLLEKEEDDDDQIGGFPALPTSSTQQPFYDGPR 419
Query: 418 KN-MQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTG--RGPRVPSM 474
Q+ FQ G+TPV RF+ +N +G I + + I+I+FHDT +P+
Sbjct: 420 PTPRQKPFQSGSTPVHL-MHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSIHHATHLPNS 478
Query: 475 TDYFGFTMASLNENGSVFANPCKGEKNMSTLMYRP-FSSWANNSEWSMRF-EGEEVKAVA 532
++ TMA L+ + A C+ + +++ ++ FSSW N EW++ + E+++A+
Sbjct: 479 LNH---TMADLSTEAILLA--CESTEELASKLHCIYFSSWDANKEWTVDMPKDEDIEAIC 533
Query: 533 LGTAWVAAVTSLNFLRIFTEGGFQDQL 559
LG W A TS +R+FT GG Q ++
Sbjct: 534 LGQGWAACATSALLVRLFTVGGVQKEI 560
Score = 238 (88.8 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 71/257 (27%), Positives = 123/257 (47%)
Query: 549 IFTEGGFQDQLAVVTHVS---DCDQMLEFRVFNIAKGTEP-LKGR-LPLTPGSQLTWFGF 603
+ + G +QL V+ H D DQ L ++ + K + L G L LT S L W GF
Sbjct: 567 VVSMAGHGEQLMVIYHRGTGFDGDQCLGVQLMELGKKKKQILHGDPLSLTKKSYLVWVGF 626
Query: 604 SEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKD-KKSDENYWIVGL--NASKLFCIVC 660
S EG DS+GI+R+ G +W+P+ + + K ++YW+VG+ N +L CI C
Sbjct: 627 SAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNTREHCKGKSDHYWVVGIHENPQQLRCIPC 686
Query: 661 KNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNN-FHLSQIPKRMEEVTDAG 719
K FP +P+P + +L + P +E ++ + FH ++ ++ G
Sbjct: 687 KGAR-FPPTLPRPAVAILPFTLPYCQVTTEKGQMEEQYWRSVVFH-----NYVDYLSKNG 740
Query: 720 LDTSSLDDEAFNLEAA-QDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTK 778
+ LD+ A + Q +++L A C ++ R EL L++ + AIK ++
Sbjct: 741 YE---LDENAKSQPVKEQQELLMKLFALSCKLEREFRCVELADLMT-QNVVNLAIKYASR 796
Query: 779 LKLPNLAERFNSILEER 795
+ NLA+R + + E+
Sbjct: 797 SRRLNLAQRLSEMAVEK 813
Score = 95 (38.5 bits), Expect = 6.3e-22, Sum P(3) = 6.3e-22
Identities = 69/332 (20%), Positives = 142/332 (42%)
Query: 49 LPSNLPKILRH-HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIR 107
+PS K +R+ H +G T + + +C+ + D V++++ + +I +
Sbjct: 1 MPSE-QKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWENLDDDDPKSIN-----VG 54
Query: 108 VLAFN---KSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID 164
A++ K+G ++ A ++ +++ +G+ +L + F+ + +A+
Sbjct: 55 EKAYSCALKNGKLITAVSNNT-VQIHTFPEGAPDGILTRFTMNANHVVFNSDGAKIAAGS 113
Query: 165 SIGTVIYWELQSGRELHNLK-RVAP--DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221
S V E+ + + AP + DP + + S S DG ++ V +++ +
Sbjct: 114 SDFMVKVVEVADSSKQKTFRGHDAPVLSLSFDPMDIYLASASCDG-SVRVWKVEDQTCVT 172
Query: 222 DRDTAEKLFSLRGDHVQPICFLSWSP-NGKYMATSSLDRQILI-----WDVGKKLDIDRQ 275
+ +K + + + IC L+W P +GK +A +D+ + + WD ++D+
Sbjct: 173 NWLLLQKCNDVI--NAKSICRLAWQPGSGKLLAIP-VDKVVKLYRRETWD--NQVDLSDT 227
Query: 276 KFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTEDIPSSRSNYN--GLLLF 333
+ + W P G LA V G VW+ + TE + +S Y+ GL
Sbjct: 228 SITQPLNVVVWSPCGQYLAAGSVNGSIVVWKV----ETRECTERMKHEKS-YSICGLAWH 282
Query: 334 DEEEK--EPSTSGSLSDLGEDSHGESEMPSRK 363
E+ T G+L L ED G+ + P+ K
Sbjct: 283 PRYEQIAYTDTEGNLG-LWEDI-GDGKKPNDK 312
Score = 63 (27.2 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 803 TPNTTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPS--VKFSLPIFKKKVKSPEEI 860
TP + ++ S++ +G V+ K S++ + +P+VPS V ++ + KK+ S +
Sbjct: 898 TPKSAVIASSS----QGRVNPFKVSSNKK-----DPLVPSSNVLDTMSKYSKKISSSRAV 948
Query: 861 KLGNEPTIQN--QKAKVDNNREVKGIEDNNAGAVTK-VEKTKIQSQH-PPNVFFKSSNNQ 916
+ P I+ K K + G+ K V + + ++ H PP V + +N
Sbjct: 949 NKQSSPVIKPLIPKPKSKQASAASFFQVRTPGSSEKRVGEREEKAGHEPPEVQVTAQDNT 1008
Query: 917 ENTN-KAG 923
EN K G
Sbjct: 1009 ENKRPKTG 1016
Score = 43 (20.2 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 18/81 (22%), Positives = 34/81 (41%)
Query: 13 KCG---NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHH-RDGVTALA 68
KC NA S C + W + L+ A + + ++ N + + +
Sbjct: 179 KCNDVINAKSICRLAWQPGSGKLL-AIPVDKVVKLYRRETWDNQVDLSDTSITQPLNVVV 237
Query: 69 LSPNSTCLASGSIDHSVKLYK 89
SP LA+GS++ S+ ++K
Sbjct: 238 WSPCGQYLAAGSVNGSIVVWK 258
Score = 37 (18.1 bits), Expect = 6.8e-62, Sum P(3) = 6.8e-62
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 824 SKASTSTERSEMVEPIVPSVKF---SLPIF---------KKKVKSPEEIKLGNEPT-IQ- 869
S + + + S +++P++P K S F +K+V EE K G+EP +Q
Sbjct: 944 SSRAVNKQSSPVIKPLIPKPKSKQASAASFFQVRTPGSSEKRVGEREE-KAGHEPPEVQV 1002
Query: 870 NQKAKVDNNREVKGIE 885
+ +N R G +
Sbjct: 1003 TAQDNTENKRPKTGFQ 1018
>MGI|MGI:2443514 [details] [associations]
symbol:Wdhd1 "WD repeat and HMG-box DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IMP] [GO:0033044 "regulation of chromosome organization"
evidence=IMP] [GO:0070063 "RNA polymerase binding" evidence=IDA]
[GO:0070829 "heterochromatin maintenance" evidence=IMP]
InterPro:IPR009071 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443514 Pfam:PF00505 GO:GO:0005654
GO:GO:0000775 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 GO:GO:0003682
GO:GO:0003723 GO:GO:0006396 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0033044
GeneTree:ENSGT00390000002030 KO:K11274 InterPro:IPR022100
Pfam:PF12341 GO:GO:0070063 GO:GO:0070829 CTD:11169
HOGENOM:HOG000015160 HOVERGEN:HBG074190 OMA:MLKTGSS
OrthoDB:EOG4W6NV9 EMBL:BC063740 EMBL:AK036390 EMBL:AK052690
IPI:IPI00125355 IPI:IPI00282522 IPI:IPI00466978 RefSeq:NP_766186.2
UniGene:Mm.265615 ProteinModelPortal:P59328 SMR:P59328
STRING:P59328 PhosphoSite:P59328 PaxDb:P59328 PRIDE:P59328
Ensembl:ENSMUST00000111790 Ensembl:ENSMUST00000111792 GeneID:218973
KEGG:mmu:218973 UCSC:uc007thu.2 UCSC:uc007thv.2 UCSC:uc007thw.2
InParanoid:P59328 NextBio:376501 Bgee:P59328 CleanEx:MM_WDHD1
Genevestigator:P59328 Uniprot:P59328
Length = 1117
Score = 494 (179.0 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 155/567 (27%), Positives = 263/567 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + +D ++VT S D L + PK + G A + + +
Sbjct: 11 GHTEGHTEVCFDDSGSYIVTCGSDGDVRMWED--LDDDDPKSVNV---GEKAFSCALKNG 65
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L + +++V++Y FP G +TRFT + FN +G+ +AA D +K+++ +D
Sbjct: 66 KLVTAVSNNTVQVYTFPEGVPDGILTRFTTNANHVVFNGAGNKIAAGSSDFLVKVVDVMD 125
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--QSGRELHNLKRVAPDIGS 192
S + +GH PV L+FDP +LAS GTV W + Q+ + + + D+
Sbjct: 126 NSQQQTFRGHDAPVLSLSFDPKDIFLASASCDGTVRVWNISDQTCAVSWPVLQKSNDV-V 184
Query: 193 DPSSMNVLSWSPD-GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLSWSPNGK 250
+ S+ L+W P G+ LAVP ++ V +Y R+T F L + Q + ++WSP G+
Sbjct: 185 NAKSICRLAWQPKAGKLLAVP-VEKSVKLYRRETWSNPFDLSDSSISQTLNIVTWSPCGQ 243
Query: 251 YMATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGKYGVWESV 308
Y+A +++ I++W+V K ++R K + IC +AW P + + DV G GV E+V
Sbjct: 244 YLAAGAINGLIVVWNVETKDCMERVKHEKGYAICGLAWHPTCSRICYTDVEGNLGVLENV 303
Query: 309 VPSSMKSPTEDIPSS-RSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMPSRKRLRK 367
S K + + S +YN L FD ++ TS S D D+ E S+ + +
Sbjct: 304 CDLSGKVSSNKVSSRVEKDYNDL--FDGDD----TS-SAGDFLNDNAVEIPSFSKGIINE 356
Query: 368 QTXXXXXXXXXXXXXXXXXPKTE-SRKKAHSTHKEYSDKGNGS--------RSMRTSTRK 418
+ + KA +HKE D R R
Sbjct: 357 DDDNDDIMLAADHDLGDDENSVDVTMLKADLSHKEEGDDDQARSIHNLPLIRPQRPFYDG 416
Query: 419 NM----QEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVPSM 474
M Q+ FQ +TP+ RF+ +N +G I D S I+++FHDT +
Sbjct: 417 PMPTPRQKPFQSSSTPLHLS-HRFMVWNSVGIIRCYNDDQDSAIDVEFHDTSIH-HATHL 474
Query: 475 TDYFGFTMASLNENGSVFANPCKGEKNMSTLMY-RPFSSWANNSEWSMRF-EGEEVKAVA 532
+ F +TM +L+ + A C+ +++ ++ FSSW ++ EW + + E+++A+
Sbjct: 475 LNAFNYTMGTLSHEAILLA--CESADELASKLHCLHFSSWDSSKEWMVDMPQNEDIEAIC 532
Query: 533 LGTAWVAAVTSLNFLRIFTEGGFQDQL 559
LG W AA T+ LR+FT GG Q ++
Sbjct: 533 LGLGWAAAATTALLLRLFTIGGVQKEV 559
Score = 254 (94.5 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 72/264 (27%), Positives = 127/264 (48%)
Query: 549 IFTEGGFQDQLAVVTHVS---DCDQMLEFRVFNIA-KGTEPLKGR-LPLTPGSQLTWFGF 603
+ + G +QL +V H D DQ L ++ + K + L G LPLT S LTW GF
Sbjct: 566 VVSMAGHGEQLCIVYHRGTGFDGDQCLGVQLLELGRKKNQVLHGDPLPLTRKSYLTWLGF 625
Query: 604 SEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKD-KKSDENYWIVGL--NASKLFCIVC 660
S EG DS+G +R+ G +W P+ + + K ++YW+VG+ N +L CI C
Sbjct: 626 SAEGTPCYVDSEGCVRMLNRGLGNTWTPVCNIREHCKGKSDHYWVVGIHENPQQLRCIPC 685
Query: 661 KNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNNFHLSQIPKRMEEVTDAGL 720
K FP +P+P + +L P + +E +F +H ++ + G
Sbjct: 686 KG-SRFPPTLPRPAVAILSFKLPYCQTSTEKGQMEEQF----WHSVLFHNYLDYLAKNGY 740
Query: 721 D-TSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTKL 779
D S+ ++A Q +++++A C ++ R EL L++ ++ AIK ++
Sbjct: 741 DYEESIKNQAVK---EQQELLMKMLALSCKLEREFRCVELADLMT-QNAVHLAIKYASRS 796
Query: 780 KLPNLAERFNSILEERL--LSETK 801
+ LA++ + + E+ L+ET+
Sbjct: 797 RKLILAQKLSELAAEKAAELAETQ 820
Score = 47 (21.6 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 8 LREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTA- 66
L++++ NA S C + W +A L+ A E ++ ++ SN P L T
Sbjct: 177 LQKSNDVVNAKSICRLAWQPKAGKLL-AVPVEKSVKLYRRETWSN-PFDLSDSSISQTLN 234
Query: 67 -LALSPNSTCLASGSID 82
+ SP LA+G+I+
Sbjct: 235 IVTWSPCGQYLAAGAIN 251
Score = 39 (18.8 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 19/86 (22%), Positives = 29/86 (33%)
Query: 824 SKASTSTERSEMVEPIVPSVKFSLPIFKKKVKSPEEIKLGNEPTIQNQKAKVDNNREVKG 883
S+ STS R E E P+ K P + Q + + D EVK
Sbjct: 934 SRKSTSLNRMENNE--------KSPVIKPLTPKPRSKQASAASYFQKRTPQADKTEEVKE 985
Query: 884 IEDNNAGAVTKVEKTKIQSQHPPNVF 909
+++ V ++Q P F
Sbjct: 986 NPKSSSSDAPAVCLQNSENQRPKTGF 1011
Score = 37 (18.1 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 828 TSTERSEMVEPIVPSVKF 845
TSTE+ +M E SV F
Sbjct: 711 TSTEKGQMEEQFWHSVLF 728
>UNIPROTKB|O75717 [details] [associations]
symbol:WDHD1 "WD repeat and HMG-box DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0033044 "regulation of chromosome organization" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=IEA] [GO:0070829
"heterochromatin maintenance" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR009071 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF00505 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 KO:K11274
InterPro:IPR022100 Pfam:PF12341 InterPro:IPR013979 Pfam:PF08662
EMBL:AJ006266 EMBL:BC000622 EMBL:BC043349 EMBL:BC063041
IPI:IPI00411614 RefSeq:NP_001008397.1 RefSeq:NP_009017.1
UniGene:Hs.385998 PDB:2D7L PDBsum:2D7L ProteinModelPortal:O75717
SMR:O75717 IntAct:O75717 STRING:O75717 PhosphoSite:O75717
PaxDb:O75717 PRIDE:O75717 Ensembl:ENST00000360586 GeneID:11169
KEGG:hsa:11169 UCSC:uc001xbm.2 CTD:11169 GeneCards:GC14M055405
HGNC:HGNC:23170 HPA:HPA001122 MIM:608126 neXtProt:NX_O75717
PharmGKB:PA134988782 HOGENOM:HOG000015160 HOVERGEN:HBG074190
InParanoid:O75717 OMA:MLKTGSS OrthoDB:EOG4W6NV9 PhylomeDB:O75717
EvolutionaryTrace:O75717 GenomeRNAi:11169 NextBio:42497
ArrayExpress:O75717 Bgee:O75717 CleanEx:HS_WDHD1
Genevestigator:O75717 GermOnline:ENSG00000198554 Uniprot:O75717
Length = 1129
Score = 478 (173.3 bits), Expect = 5.0e-63, Sum P(3) = 5.0e-63
Identities = 155/583 (26%), Positives = 274/583 (46%)
Query: 9 REAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALA 68
R+ + G+ + +D +VT S + + I + L + PK + G A +
Sbjct: 5 RKPMRYGHTEGHTEVCFDDSGSFIVTCGS-DGDVRIWEDLDDDD-PKFINV---GEKAYS 59
Query: 69 LSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128
+ S L + +++++++ FP G +TRFT + FN G+ +AA D +K
Sbjct: 60 CALKSGKLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVK 119
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--QSGRELHNLKRV 186
+++ +D S + +GH PV L+FDP +LAS G+V W++ Q+ L +
Sbjct: 120 IVDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQK 179
Query: 187 APDIGSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLS 244
D+ + S+ L+W P G+ LA+P ++ V +Y R++ F L + + Q + ++
Sbjct: 180 CNDV-INAKSICRLAWQPKSGKLLAIP-VEKSVKLYRRESWSHQFDLSDNFISQTLNIVT 237
Query: 245 WSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGKY 302
WSP G+Y+A S++ I++W+V K ++R K + IC +AW P ++ D G
Sbjct: 238 WSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNL 297
Query: 303 GVWESVVPSSMKSPTEDIPSS-RSNYNGLL-----------LFDEEEKEPSTSGSLSDLG 350
G+ E+V S K+ + + S +YN L L D + PS S + +
Sbjct: 298 GLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMSNAGDFLNDNAVEIPSFSKGI--IN 355
Query: 351 EDSHGESEMPSRKRLRKQTXXXXXXXXXXXXXXXXXPKTESRKKAHSTHKEYSDKGN-GS 409
+D E M + R R+++ KT S S KE + G GS
Sbjct: 356 DDEDDEDLMMASGRPRQRSHILEDDENSVDISML---KTGS-----SLLKEEEEDGQEGS 407
Query: 410 ---RSMRTSTRK--------NMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHI 458
+ TS R Q+ FQ G+TP+ RF+ +N +G I + + I
Sbjct: 408 IHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHL-THRFMVWNSIGIIRCYNDEQDNAI 466
Query: 459 EIDFHDTGRGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMY-RPFSSWANNS 517
+++FHDT +++ +T+A L+ + A C+ +++ ++ FSSW ++
Sbjct: 467 DVEFHDTSIH-HATHLSNTLNYTIADLSHEAILLA--CESTDELASKLHCLHFSSWDSSK 523
Query: 518 EWSMRF-EGEEVKAVALGTAWVAAVTSLNFLRIFTEGGFQDQL 559
EW + + E+++A+ LG W AA TS LR+FT GG Q ++
Sbjct: 524 EWIIDLPQNEDIEAICLGQGWAAAATSALLLRLFTIGGVQKEV 566
Score = 239 (89.2 bits), Expect = 5.0e-63, Sum P(3) = 5.0e-63
Identities = 77/297 (25%), Positives = 136/297 (45%)
Query: 549 IFTEGGFQDQLAVVTHVS---DCDQMLEFRVFNIAKGTEP-LKGR-LPLTPGSQLTWFGF 603
+ + G +QL +V H D DQ L ++ + K + L G LPLT S L W GF
Sbjct: 573 VVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGDPLPLTRKSYLAWIGF 632
Query: 604 SEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKD-KKSDENYWIVGL--NASKLFCIVC 660
S EG DS+GI+R+ G +W PI + + K ++YW+VG+ N +L CI C
Sbjct: 633 SAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPC 692
Query: 661 KNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMN---NFHLSQIPKRMEEVTD 717
K FP +P+P + +L P +E +F + + HL + K E +
Sbjct: 693 KG-SRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYEE 751
Query: 718 AGLDTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVT 777
+ + ++ + Q +++++A C ++ R EL L++ ++ AIK +
Sbjct: 752 STKNQATKE---------QQELLMKMLALSCKLEREFRCVELADLMT-QNAVNLAIKYAS 801
Query: 778 KLKLPNLAERFNSILEERLLSETKETPNTTLLISNNNVTARGDVDVSKASTSTERSE 834
+ + LA++ L E + + E T + R ++ ++T+TE S+
Sbjct: 802 RSRKLILAQK----LSELAVEKAAELTATQVEEEEEEEDFRKKLNAGYSNTATEWSQ 854
Score = 58 (25.5 bits), Expect = 5.0e-63, Sum P(3) = 5.0e-63
Identities = 16/76 (21%), Positives = 40/76 (52%)
Query: 806 TTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPSVKFSLPIFKKKVKSPEEIKLGNE 865
+T ++ N +++ +S+ +T+ E+S +++P++P K P K+ + + N
Sbjct: 932 STNILDNMGKSSKKSTALSR-TTNNEKSPIIKPLIPKPK---P---KQASAASYFQKRNS 984
Query: 866 PTIQNQKAKVDNNREV 881
T + ++ K +N + V
Sbjct: 985 QTNKTEEVKEENLKNV 1000
Score = 48 (22.0 bits), Expect = 5.6e-62, Sum P(3) = 5.6e-62
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 885 ED-NNAGAVTKVEKTKIQSQHPP--NVFFKSSNNQENTNKAGEVNXXXXXXXXXXNPF 939
ED ++G EK +I H P N F KS+N+ + + K+G V NPF
Sbjct: 863 EDAEDSGEADDEEKPEI---HKPGQNSFSKSTNSSDVSAKSGAVTFSSQGRV---NPF 914
Score = 37 (18.1 bits), Expect = 6.3e-42, Sum P(3) = 6.3e-42
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 686 SSDLGAETLENEFMMNNFHLSQIPKRMEEVTDAGLDTSSLDD 727
S+ GA T ++ +N F +S K ++ T+ LD+
Sbjct: 897 SAKSGAVTFSSQGRVNPFKVSASSKEPAMSMNSARSTNILDN 938
Score = 37 (18.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 513 WANNSEWSMRFEGEEVK 529
WAN ++ EG E K
Sbjct: 1065 WANKAKGETASEGTEAK 1081
>UNIPROTKB|E1B7F5 [details] [associations]
symbol:WDHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070829 "heterochromatin maintenance" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=IEA] [GO:0033044
"regulation of chromosome organization" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] InterPro:IPR009071 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Pfam:PF00505 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00390000002030 KO:K11274
InterPro:IPR022100 Pfam:PF12341 InterPro:IPR013979 Pfam:PF08662
CTD:11169 OMA:MLKTGSS EMBL:DAAA02029204 IPI:IPI00686187
RefSeq:NP_001179695.1 UniGene:Bt.36741 ProteinModelPortal:E1B7F5
Ensembl:ENSBTAT00000025453 GeneID:540681 KEGG:bta:540681
NextBio:20878768 Uniprot:E1B7F5
Length = 1127
Score = 471 (170.9 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 152/569 (26%), Positives = 259/569 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + +D +VT S + + I + L + PK + G A + + +
Sbjct: 11 GHTEGHTDVCFDDSGSCIVTCGS-DGDVRIWEDLDDDD-PKSINV---GEKAYSCALKNG 65
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L + +++++++ FP G +TRFT + FN G+ +AA D +K+++ +D
Sbjct: 66 KLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKIVDVMD 125
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--QSGRELHNLKRVAPDIGS 192
S + +GH PV L+FDP +LAS G+V W++ Q+ L + D+
Sbjct: 126 CSQQKTFRGHDAPVLSLSFDPKDIFLASSSCDGSVKVWQISDQTCPISWPLLQKCNDV-V 184
Query: 193 DPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLSWSPNGK 250
+ S+ L+W P G+ LAVP ++ V +Y R+T F L D + Q + ++WSP G+
Sbjct: 185 NAKSICRLAWQPKSGKLLAVP-VEKSVKLYKRETWSNQFDLSDDVISQTLNIVTWSPCGQ 243
Query: 251 YMATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGKYGVWESV 308
Y+A S++ I+IW+V K I+R K + IC ++W P +A D G G+ E+V
Sbjct: 244 YLAAGSINGLIIIWNVETKNCIERVKHEKGYAICGLSWHPTCGQIAYTDAEGNLGLLENV 303
Query: 309 VPSSMKSPTEDIPSS-RSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMPSRKRLRK 367
S K + S +YN L FD ++ + L+D +H S+
Sbjct: 304 CDPSGKMSNRKVSSRVEKDYNDL--FDGDDTS-NVGDCLNDSAVKTHSFSKGIVNDEEDD 360
Query: 368 QTXXXXXXXXXXXXXXXXXPKTE----SRKKAHSTHKEYSDKGNGS---RSMRTSTRK-- 418
+ K S KE D GS + TS R
Sbjct: 361 DDLMLASGRPRQRSHILEDDENSVDVTMLKIGSSLFKEEEDDQGGSIHNLPVVTSQRPFY 420
Query: 419 ------NMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVP 472
Q+ FQ G+TP+ RF+ +N +G I + + I+++FHDT
Sbjct: 421 DGPMPTPRQKPFQSGSTPLHL-THRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIH-HAT 478
Query: 473 SMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMY-RPFSSWANNSEWSMRFE-GEEVKA 530
+ + F +T+A L+ + A C+ +++ ++ SSW ++ EW + E+++A
Sbjct: 479 HLLNTFNYTVADLSHEAVLLA--CESTDELASKLHCLHLSSWDSSKEWIVDMPPNEDIEA 536
Query: 531 VALGTAWVAAVTSLNFLRIFTEGGFQDQL 559
+ LG W AA TS LR+FT GG Q ++
Sbjct: 537 ICLGQGWAAAATSSLLLRLFTIGGVQKEV 565
Score = 241 (89.9 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 79/297 (26%), Positives = 137/297 (46%)
Query: 549 IFTEGGFQDQLAVVTHVS---DCDQMLEFRVFNIAKGTEP-LKGR-LPLTPGSQLTWFGF 603
I + G +QL +V H D DQ L ++ + K + L G LPLT S L W GF
Sbjct: 572 IVSMAGHGEQLVIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGDPLPLTRKSYLVWVGF 631
Query: 604 SEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKD-KKSDENYWIVGL--NASKLFCIVC 660
S EG DS+GI+R+ G +W P+ + + K ++YW+VG+ N +L CI C
Sbjct: 632 SAEGTPCYVDSEGIVRMLNRGLGHTWTPVCNTREHCKGKSDHYWVVGIHENPQQLRCIPC 691
Query: 661 KNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMN---NFHLSQIPKRMEEVTD 717
K FP +P+P + +L P + +E ++ + + HL + K E +
Sbjct: 692 KG-SRFPPTLPRPAVAVLSFKLPYCQTATEKGQMEEQYWRSVIFHNHLDYLAKNGYEYEE 750
Query: 718 AGLDTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVT 777
+ + ++ + Q +L+++A C ++ R EL L++ ++ AIK +
Sbjct: 751 STKNQATKE---------QQELLLKMLALSCKLEREFRCVELAGLMT-QNAVNLAIKYAS 800
Query: 778 KLKLPNLAERFNSILEERLLSETKETPNTTLLISNNNVTARGDVDVSKASTSTERSE 834
+ + LA+R + E+ +E T R ++V ++TSTE S+
Sbjct: 801 RSRRLILAQRLGELAVEKA-AELAATQAE----EEEEEDFRKKLNVGYSNTSTEWSQ 852
Score = 68 (29.0 bits), Expect = 7.5e-19, Sum P(3) = 7.5e-19
Identities = 46/262 (17%), Positives = 107/262 (40%)
Query: 55 KILRH-HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN- 112
K +R+ H +G T + + +C+ + D V++++ + +I + A++
Sbjct: 6 KPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSIN-----VGEKAYSC 60
Query: 113 --KSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
K+G ++ A ++ I++ +G +L + F+ + +A+ S V
Sbjct: 61 ALKNGKLVTAVSNNT-IQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVK 119
Query: 171 YWELQSGRELHNLK-RVAP--DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
++ + + AP + DP + + S S DG ++ V + + +
Sbjct: 120 IVDVMDCSQQKTFRGHDAPVLSLSFDPKDIFLASSSCDG-SVKVWQISDQTCPISWPLLQ 178
Query: 228 KLFSLRGDHVQPICFLSWSP-NGKYMATSSLDRQILIWDV---GKKLDIDRQKFDDRICC 283
K + + + IC L+W P +GK +A +++ + ++ + D+ +
Sbjct: 179 KCNDVV--NAKSICRLAWQPKSGKLLAVP-VEKSVKLYKRETWSNQFDLSDDVISQTLNI 235
Query: 284 MAWKPIGNALAVIDVMGKYGVW 305
+ W P G LA + G +W
Sbjct: 236 VTWSPCGQYLAAGSINGLIIIW 257
Score = 57 (25.1 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 864 NEPTIQNQKAKVDNNREVKGIEDNNAGAVTKVEKTKIQSQHPPNVFFKSSNNQENTN-KA 922
++P ++NQ V+ + E G DN E T+I +H N FFKS+++ + K+
Sbjct: 851 SQPRLRNQ---VEEDTEDNGEADNTE------ENTEIH-KHGQNPFFKSADSSDMPALKS 900
Query: 923 GEVNXXXXXXXXXXNPF 939
G V NPF
Sbjct: 901 GAVTSSSQGRI---NPF 914
Score = 51 (23.0 bits), Expect = 1.0e-61, Sum P(3) = 1.0e-61
Identities = 21/105 (20%), Positives = 46/105 (43%)
Query: 806 TTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPSVKFSLPIFKKKVKSPEEIKLGNE 865
+T ++ N +++ +++A T E+S +++P++P K P++ +
Sbjct: 932 STNILDTMNKSSKKSTALNRA-TDNEKSPVIKPLIPKPK------------PKQASAAS- 977
Query: 866 PTIQNQKAKVDNNREVKGIEDNNAGAVTK-VEKTKIQSQHPPNVF 909
Q + ++ D EVK N+ + T V ++Q P F
Sbjct: 978 -FFQKRTSQADRTEEVKEENPKNSSSETPAVCPQNTENQRPKTGF 1021
Score = 42 (19.8 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 554 GFQDQLAVVTHVSDCDQMLEFR 575
G D L + V DC Q FR
Sbjct: 112 GSSDFLVKIVDVMDCSQQKTFR 133
Score = 42 (19.8 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 8 LREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHH-RDGVTA 66
L++ + NA S C + W ++ L+ A E ++ ++ SN + +
Sbjct: 177 LQKCNDVVNAKSICRLAWQPKSGKLL-AVPVEKSVKLYKRETWSNQFDLSDDVISQTLNI 235
Query: 67 LALSPNSTCLASGSID 82
+ SP LA+GSI+
Sbjct: 236 VTWSPCGQYLAAGSIN 251
Score = 40 (19.1 bits), Expect = 4.7e-40, Sum P(2) = 4.7e-40
Identities = 26/116 (22%), Positives = 48/116 (41%)
Query: 690 GAETLENEFMMNNFHLSQIPKRMEEVTDAGLDTSSLDDEAFNLEAAQDRCILRLIASCCN 749
GA T ++ +N F +S K +G T+ LD N + + + R +
Sbjct: 901 GAVTSSSQGRINPFKVSGNSKEPAISVSSGRSTNILD--TMNKSSKKSTALNR----ATD 954
Query: 750 GDKLVRATELVK-LLSLDKSMQGAIKLVTKLKLPNLAERFNSILEERLLSETKETP 804
+K + ++K L+ K Q + + K + A+R + EE + + ETP
Sbjct: 955 NEK----SPVIKPLIPKPKPKQASAASFFQ-KRTSQADRTEEVKEENPKNSSSETP 1005
Score = 37 (18.1 bits), Expect = 3.0e-60, Sum P(3) = 3.0e-60
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 906 PNVFFKSSNNQENTNKAGEVNXXXXXXXXXXNPFFKSS 943
P + + + E+ +A NPFFKS+
Sbjct: 853 PRLRNQVEEDTEDNGEADNTEENTEIHKHGQNPFFKSA 890
>UNIPROTKB|I3L908 [details] [associations]
symbol:WDHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070829 "heterochromatin maintenance" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=IEA] [GO:0033044
"regulation of chromosome organization" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] InterPro:IPR009071 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Pfam:PF00505 GO:GO:0005634
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00390000002030 InterPro:IPR022100 Pfam:PF12341
InterPro:IPR013979 Pfam:PF08662 OMA:MLKTGSS EMBL:CU480474
Ensembl:ENSSSCT00000027382 Uniprot:I3L908
Length = 1066
Score = 319 (117.4 bits), Expect = 8.8e-60, Sum P(4) = 8.8e-60
Identities = 85/295 (28%), Positives = 153/295 (51%)
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG 135
L + +++++++ FP G +TRFT + FN+ G+ +AA D +K+++ +D
Sbjct: 4 LVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVIFNEDGTKIAAGSSDFLVKVVDVMDC 63
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--QSGRELHNLKRVAPDIGSD 193
S + +GH PV L+FDP +LAS G+V W++ Q+ L + D+ +
Sbjct: 64 SQQKTFRGHDAPVLSLSFDPKDIFLASSSCDGSVKVWQISDQTCAISWPLLQKCNDV-IN 122
Query: 194 PSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLSWSPNGKY 251
S+ L+W P G+ LAVP ++ V +Y R+T F L + + Q + ++WSP G+Y
Sbjct: 123 AKSICRLAWQPKSGKLLAVP-VEKSVKLYRRETWSNQFDLSDNFISQTLNIVTWSPCGQY 181
Query: 252 MATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGKYGVWESVV 309
+A S++ I++W+V K ++R K + IC ++W P +A D G G+ E+V
Sbjct: 182 LAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLSWHPTCGQIAYTDAEGNLGLLENVC 241
Query: 310 PSSMKSPTEDIPSS-RSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMPSRK 363
+ K + S +YN L FD ++ +G++ D D+ E+ S++
Sbjct: 242 DPNGKMSGSKVSSRVERDYNDL--FDGDD-----TGNVGDFPNDNAVETHSFSKE 289
Score = 238 (88.8 bits), Expect = 8.8e-60, Sum P(4) = 8.8e-60
Identities = 69/257 (26%), Positives = 122/257 (47%)
Query: 549 IFTEGGFQDQLAVVTHVS---DCDQMLEFRVFNIAKGTEP-LKGR-LPLTPGSQLTWFGF 603
+ + G +QL +V H D DQ L ++ + K + L G LPLT S L W GF
Sbjct: 510 VVSMAGHGEQLIIVYHRGTGFDGDQCLGIQLLQLGKKKKQILHGDPLPLTRKSYLVWLGF 569
Query: 604 SEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKD-KKSDENYWIVGL--NASKLFCIVC 660
S EG DS+GI+R+ G +W PI + + K ++YW+VG+ N L CI C
Sbjct: 570 SAEGTPCYVDSEGIVRMLNRGLGYTWTPICNTREHCKGKSDHYWVVGIHENPQHLRCIPC 629
Query: 661 KNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNN-FHLSQIPKRMEEVTDAG 719
K FP +P+P + +L P + +E ++ + FH ++ + +G
Sbjct: 630 KG-SRFPPTLPRPAIAVLSFKLPYCQTGTEKGQMEEQYWRSVLFH-----NHLDYLAKSG 683
Query: 720 LD-TSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTK 778
+ S ++A Q +++++A C ++ R EL L++ ++ AIK ++
Sbjct: 684 YEYEESTKNQAIK---EQQELLMKMLALSCKLEREFRCVELADLMT-QNAVNLAIKYASR 739
Query: 779 LKLPNLAERFNSILEER 795
+ LA++ + + E+
Sbjct: 740 SRRLILAQKLSELAVEK 756
Score = 193 (73.0 bits), Expect = 8.8e-60, Sum P(4) = 8.8e-60
Identities = 44/141 (31%), Positives = 77/141 (54%)
Query: 421 QEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVPSMTDYFGF 480
Q+ FQ G+TP+ RF+ +N +G I + + I+++FHDT +++ +
Sbjct: 367 QKPFQSGSTPLHL-THRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIH-HATHLSNTLNY 424
Query: 481 TMASLNENGSVFANPCKGEKNMSTLMY-RPFSSWANNSEWSMRFE-GEEVKAVALGTAWV 538
T+A L+ + A C+ +++ ++ FSSW ++ EW + E+++AV LG W
Sbjct: 425 TVADLSHEAILLA--CESTDELASKLHCLHFSSWDSSKEWIVDMPPNEDIEAVCLGQGWA 482
Query: 539 AAVTSLNFLRIFTEGGFQDQL 559
AA TS LR+FT GG Q ++
Sbjct: 483 AAATSSLLLRLFTIGGVQKEV 503
Score = 128 (50.1 bits), Expect = 2.3e-39, Sum P(4) = 2.3e-39
Identities = 52/225 (23%), Positives = 100/225 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPK-ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
LVTA S+ T I +H P +P IL + + + T +A+GS D VK+
Sbjct: 4 LVTAVSNNT-IQVHT--FPEGVPDGILTRFTTNANHVIFNEDGTKIAAGSSDFLVKVVDV 60
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA---RVLKGHKGP 147
Q P+ L+F+ LA++ D +K+ D + A +L+
Sbjct: 61 MDCSQQKTFRGHDAPVLSLSFDPKDIFLASSSCDGSVKVWQISDQTCAISWPLLQKCNDV 120
Query: 148 VTG-----LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSW 202
+ LA+ P S L ++ +V + ++ +L + + S ++N+++W
Sbjct: 121 INAKSICRLAWQPKSGKLLAVPVEKSVKLYRRETWSNQFDL---SDNFISQ--TLNIVTW 175
Query: 203 SPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP 247
SP G+ LA + +++++ +T + + ++ + IC LSW P
Sbjct: 176 SPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLSWHP 220
Score = 50 (22.7 bits), Expect = 8.8e-60, Sum P(4) = 8.8e-60
Identities = 19/92 (20%), Positives = 44/92 (47%)
Query: 787 RFNSILEERLLSETKETPNTTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPSVKF- 845
+ NS ++ S + NT+L N N + + ++ +T+ E+S +++P+VP K
Sbjct: 855 KVNSFHKQNFCS-LNISANTSLYY-NMNKSKKSALN---RATNNEKSPVIKPLVPKPKSK 909
Query: 846 ---SLPIFKKKVKSPEEIKLGNEPTIQNQKAK 874
+ F+K+ ++ + E +N ++
Sbjct: 910 QASAASFFQKRTSQTDKTEEIKEENTKNSSSE 941
Score = 49 (22.3 bits), Expect = 1.1e-59, Sum P(4) = 1.1e-59
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 848 PIFKKKVKSPEEIKLGNEPTIQNQKAKVDNNREVKGIEDNNAGAVTK-VEKTKIQSQHPP 906
P+ K V P+ + Q + ++ D E+K N+ + T V ++Q P
Sbjct: 897 PVIKPLVPKPKSKQASAASFFQKRTSQTDKTEEIKEENTKNSSSETPAVCPQNTENQRPK 956
Query: 907 NVF 909
F
Sbjct: 957 TGF 959
Score = 48 (22.0 bits), Expect = 1.4e-59, Sum P(4) = 1.4e-59
Identities = 25/91 (27%), Positives = 37/91 (40%)
Query: 850 FKKKVKSPEEIKLGNEPTIQNQKAKVDNNREVKGIEDNNAGAVTKVEKTKIQSQHPPNVF 909
F+KK+ + N PT +Q NR + ED V +E+ +H N F
Sbjct: 775 FRKKLNAG----YSNTPTEWSQPRL--RNRVEEDTEDTEE--VDDIEEKPEIHKHRQNPF 826
Query: 910 FKSSNNQE-NTNKAGEVNXXXXXXXXXXNPF 939
FKS+++ + K G V NPF
Sbjct: 827 FKSADSTDVPAIKKGAVTSSSQGRI---NPF 854
Score = 44 (20.5 bits), Expect = 1.0e-30, Sum P(4) = 1.0e-30
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 13 KCG---NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHH-RDGVTALA 68
KC NA S C + W ++ L+ A E ++ ++ SN + + + +
Sbjct: 116 KCNDVINAKSICRLAWQPKSGKLL-AVPVEKSVKLYRRETWSNQFDLSDNFISQTLNIVT 174
Query: 69 LSPNSTCLASGSID 82
SP LA+GSI+
Sbjct: 175 WSPCGQYLAAGSIN 188
Score = 42 (19.8 bits), Expect = 5.9e-59, Sum P(4) = 5.9e-59
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 906 PNVFFKSSNNQENTNKAGEVNXXXXXXXXXXNPFFKSS 943
P + + + E+T + ++ NPFFKS+
Sbjct: 793 PRLRNRVEEDTEDTEEVDDIEEKPEIHKHRQNPFFKSA 830
>RGD|1310200 [details] [associations]
symbol:Wdhd1 "WD repeat and HMG-box DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000775 "chromosome,
centromeric region" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0033044 "regulation of chromosome organization" evidence=ISO]
[GO:0070063 "RNA polymerase binding" evidence=ISO] [GO:0070829
"heterochromatin maintenance" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1310200 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR022100 Pfam:PF12341
InterPro:IPR013979 Pfam:PF08662 IPI:IPI00949117
Ensembl:ENSRNOT00000068574 UCSC:RGD:1310200 ArrayExpress:D3ZR29
Uniprot:D3ZR29
Length = 640
Score = 519 (187.8 bits), Expect = 8.2e-56, Sum P(2) = 8.2e-56
Identities = 160/575 (27%), Positives = 270/575 (46%)
Query: 8 LREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL 67
+++ + G+ + +D +VT S D L + PK + G A
Sbjct: 4 IQKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRMWED--LDDDDPKSVNV---GEKAF 58
Query: 68 ALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGI 127
+ + + L + +++V++Y FP G +TRFT + FN G+ +AA D +
Sbjct: 59 SCALKNGKLVTAVSNNTVQVYTFPEGAPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLV 118
Query: 128 KLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--QSGRELHNLKR 185
K+++ +D S + +GH PV L+FDP +LAS GTV W + Q+ + R
Sbjct: 119 KVVDVMDNSQQQTFRGHDAPVLSLSFDPKDVFLASASCDGTVRVWNISDQTCAASWPVLR 178
Query: 186 VAPDIGSDPSSMNVLSWSPD-GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFL 243
+ D+ + S L+W P G+ LAVP ++ V +Y R+T F L V Q + +
Sbjct: 179 KSNDVVNSESICR-LAWQPKTGKFLAVP-VEKSVKLYRRETWSNPFDLSDSSVTQTLNIV 236
Query: 244 SWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGK 301
+WSP G+Y+A +++ I++W+V K ++R K + IC +AW P + + DV G
Sbjct: 237 TWSPCGQYLAAGAINGLIVVWNVETKECMERVKHEKGYAICGLAWHPTYSRICYTDVEGN 296
Query: 302 YGVWESVVPSSMKSPTEDIPSS-RSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMP 360
G+ E+V S K + +PS +Y+ L FD ++ TS S D D+ E+P
Sbjct: 297 LGILENVCDLSGKLSSNKVPSGVEKDYSDL--FDGDD----TS-SAGDFLNDN--AVEIP 347
Query: 361 S-RKRLRKQTXXXXXXXXXXXXXXXXXPKT-ESRKKAHSTHKEYSDKGNGS--------R 410
S K +R + + + + H+E + S +
Sbjct: 348 SFSKGIRNEEDDNDDLMLAADHVLGDDENSVDVTMLRNDLHREEGEDRQASSLHSLPLVK 407
Query: 411 SMRTSTRKNM----QEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTG 466
S R M Q+ FQP +TP+ RF+ +N +G I D S I+++FHDT
Sbjct: 408 SQRPLYDGPMPTPRQKPFQPSSTPLHL-THRFMAWNSVGIIRCYNDDQDSAIDVEFHDTS 466
Query: 467 RGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMY-RPFSSWANNSEWSMRF-E 524
+++ F +TM SL+ + A C+ +++ ++ FSSW ++ EW + E
Sbjct: 467 IH-HATHLSNAFNYTMGSLSHEAVLLA--CESADELASKLHCLHFSSWDSSKEWIVDMPE 523
Query: 525 GEEVKAVALGTAWVAAVTSLNFLRIFTEGGFQDQL 559
E+++A+ LG W AA TS LR+FT GG Q ++
Sbjct: 524 NEDIEAICLGLGWAAAATSALLLRLFTIGGVQKEV 558
Score = 89 (36.4 bits), Expect = 8.2e-56, Sum P(2) = 8.2e-56
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 549 IFTEGGFQDQLAVVTHVS---DCDQMLEFRVFNIA-KGTEPLKGR-LPLTPGSQLTWFGF 603
+ + G +QL +V H D DQ L ++ + K + L G LPLT S LTW GF
Sbjct: 565 VVSMAGHGEQLCIVYHRGTGFDGDQCLGVQLLELGRKKKQVLHGDPLPLTRKSYLTWLGF 624
Query: 604 SEEGQL 609
S EG++
Sbjct: 625 SAEGKI 630
>POMBASE|SPAPB1E7.02c [details] [associations]
symbol:mcl1 "DNA polymerase alpha accessory factor
Mcl1" species:4896 "Schizosaccharomyces pombe" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0000084 "S
phase of mitotic cell cycle" evidence=IMP] [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IGI] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IGI]
[GO:0007064 "mitotic sister chromatid cohesion" evidence=IMP]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAPB1E7.02c EMBL:CU329670 GO:GO:0006355
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0000082 GO:GO:0006281 eggNOG:COG2319
GO:GO:0006351 GO:GO:0003682 GO:GO:0006974 GO:GO:0006261
GO:GO:0071459 GO:GO:0000084 GO:GO:0000723 GO:GO:0007064 KO:K11274
OMA:REYHFED InterPro:IPR022100 Pfam:PF12341 GO:GO:0005658
RefSeq:NP_594128.1 ProteinModelPortal:Q9C107 IntAct:Q9C107
STRING:Q9C107 EnsemblFungi:SPAPB1E7.02c.1 GeneID:2543387
KEGG:spo:SPAPB1E7.02c HOGENOM:HOG000209337 OrthoDB:EOG4KWP1X
NextBio:20804402 Uniprot:Q9C107
Length = 815
Score = 444 (161.4 bits), Expect = 6.7e-54, Sum P(2) = 6.7e-54
Identities = 132/513 (25%), Positives = 232/513 (45%)
Query: 54 PKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNK 113
P + +H+D +T +A++ N C S D +V +Y T + R TLPIR +A++
Sbjct: 48 PDSIDNHQDPITGIAVAENYFCTCSE--DATVCVYPIDSPTEHTLLARTTLPIRDVAYSV 105
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
G+ +A A D+ +K++++ D S L+ K + + PN +LA G + +++
Sbjct: 106 DGNWIAIASDETAVKVVSSTDSSQIFSLRPAKASNKHVTYSPNGNFLAVSSCNGILYFYD 165
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL- 232
Q+ + L + ++ + +W P T AV + V + D L+ L
Sbjct: 166 TQTRELIKFLTNTIASLEAESEICSKAAWHPKNGTFAVASTDHFVSVISPDDWLPLYKLL 225
Query: 233 -RGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN 291
+ +H + +SWS NG Y+A S ILIWD + + + +AW+P N
Sbjct: 226 PKENH-SGVTDISWSSNGMYIAASFKKGGILIWDTQSHEVVVELPYST-VVALAWQPFEN 283
Query: 292 ALAVIDVMGKYGVWESVVPSSM----KSPTEDIPSSRS-NYNGLLLFDEEEKEPSTSGSL 346
L+ G V+P S+ PT+ + SS+S N L D + S ++
Sbjct: 284 VLSFTTNQGILYSCPDVIPKSILKEENDPTKPLTSSKSKNRTSKELDDLFGSDDEQSQNV 343
Query: 347 SDL-GEDSHGESEMPSRKRLRKQTXXXXXXXXXXXXXXXXXPKTESRKKAHSTHKEYSDK 405
+DL G ++ E+E + L K + + T +
Sbjct: 344 NDLDGNSANEENEFINHDGLDSSLDLDGDSYMVDENDLNLAKKRKQKALIDRT----TTI 399
Query: 406 GNGSRSMRTSTRKNMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDG-YSHIEIDFHD 464
NGS S R + ++ + G+TP Q G RR+LC N++G I T++ D ++ I ++FHD
Sbjct: 400 ENGS-SKRRLLQASIHKPVHTGSTPWQ-GNRRYLCLNLVGFIWTVQQDAEHNTITVEFHD 457
Query: 465 TGRGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRF- 523
+ + D F MA L+ G+++A+P E + + Y+ W+ SEW+M
Sbjct: 458 ETTHRKYHFVDDQ-KFEMACLDHEGALYASPAT-ESSPGVIYYKAHVDWSRKSEWAMALP 515
Query: 524 -EGEEVKAVALGTAWVAAVTSLNFLRIFTEGGF 555
E E ++L ++ V TS ++R+F+ GF
Sbjct: 516 MENESPVTISLSSSVVLVCTSAGYVRVFSRQGF 548
Score = 193 (73.0 bits), Expect = 6.7e-54, Sum P(2) = 6.7e-54
Identities = 66/252 (26%), Positives = 113/252 (44%)
Query: 555 FQDQLAVVTH---VSDCDQMLEFRVFNIAKGTEPLKGR-LPLTPGSQLTWFGFSEEGQLS 610
FQD + + + SD + L + + +I++ G + L P L FS+ G
Sbjct: 566 FQDTIITIANDGLSSDGNSRLVYSIEDISRDEMLQTGDGVALPPQGTLESVFFSDVGDPY 625
Query: 611 SYDSKGILRV--YTNLYG-GSWLPIFSAS---KDKKSDENYWIVGLNASKLFCIVCKNPD 664
YDS G+L V + + G W+P+ + + K E+YW V + ++ CI+ K
Sbjct: 626 IYDSTGVLLVLMHWRIPGQAKWIPVLDTNELERRKSRQESYWPVTVADNQFHCILLKGAS 685
Query: 665 LFPQVMPKPVLTLLDLSFPLASSDLGAET----LENEFMMNNFHLSQIPKRMEEVTDAGL 720
+P P+P+ T D P +++ A T LE + N L+ + + + D +
Sbjct: 686 RYPY-FPRPMFTEFDFRIPCNTNNPDASTSVPVLEELQLRNKLFLTLLE---DSIGDGDV 741
Query: 721 DTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTKLK 780
T LEA D+ +L+LI C +++ R EL K L S+ A K+
Sbjct: 742 -TEDEKISIARLEANIDKALLQLIQKACLEERIERVYELTKTLRRTTSIAAAQKIALHHS 800
Query: 781 LPNLAERFNSIL 792
L N+AE+ ++L
Sbjct: 801 LTNVAEKIGNLL 812
Score = 117 (46.2 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 45/195 (23%), Positives = 81/195 (41%)
Query: 109 LAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168
LA+ + G L G ++ I+ + H+ P+TG+A N Y + T
Sbjct: 19 LAYTRDGKFLLTVGSNQVIRKFQVGSDEEPDSIDNHQDPITGIAVAEN--YFCTCSEDAT 76
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228
V + + S E H L + + +++S DG +A+ + V + + +
Sbjct: 77 VCVYPIDSPTE-HTL------LARTTLPIRDVAYSVDGNWIAIASDETAVKVVSSTDSSQ 129
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKL------DIDRQKFDDRI 281
+FSLR +++SPNG ++A SS + + +D ++L I + + I
Sbjct: 130 IFSLRPAKASNK-HVTYSPNGNFLAVSSCNGILYFYDTQTRELIKFLTNTIASLEAESEI 188
Query: 282 CCMA-WKPIGNALAV 295
C A W P AV
Sbjct: 189 CSKAAWHPKNGTFAV 203
Score = 46 (21.3 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 17 AASFCS---ILWDQQAHHLVTASSSETTISI 44
AASF ++WD Q+H +V T +++
Sbjct: 246 AASFKKGGILIWDTQSHEVVVELPYSTVVAL 276
Score = 40 (19.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 34/182 (18%), Positives = 73/182 (40%)
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWS 203
H +T LA+ + ++L ++ S + +++ S E ++ I + N
Sbjct: 12 HTDGLTRLAYTRDGKFLLTVGSNQVIRKFQVGSDEEPDSIDNHQDPITGIAVAENYFCTC 71
Query: 204 PDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILI 263
+ T+ V Y D+ + +L PI +++S +G ++A +S + + +
Sbjct: 72 SEDATVCV---------YPIDSPTE-HTLLARTTLPIRDVAYSVDGNWIAIASDETAVKV 121
Query: 264 ---WDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTEDI 320
D + + K ++ + + P GN LAV G +++ +K T I
Sbjct: 122 VSSTDSSQIFSLRPAKASNKH--VTYSPNGNFLAVSSCNGILYFYDTQTRELIKFLTNTI 179
Query: 321 PS 322
S
Sbjct: 180 AS 181
>UNIPROTKB|C9JW18 [details] [associations]
symbol:WDHD1 "WD repeat and HMG-box DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0033044 "regulation of chromosome
organization" evidence=IEA] [GO:0070063 "RNA polymerase binding"
evidence=IEA] [GO:0070829 "heterochromatin maintenance"
evidence=IEA] InterPro:IPR009071 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Pfam:PF00505 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 KO:K11274 InterPro:IPR022100
Pfam:PF12341 InterPro:IPR013979 Pfam:PF08662 RefSeq:NP_001008397.1
UniGene:Hs.385998 GeneID:11169 KEGG:hsa:11169 CTD:11169
HGNC:HGNC:23170 GenomeRNAi:11169 NextBio:42497 EMBL:AL160471
IPI:IPI00513835 SMR:C9JW18 STRING:C9JW18 Ensembl:ENST00000420358
Ensembl:ENST00000421192 HOGENOM:HOG000170076 Uniprot:C9JW18
Length = 1006
Score = 390 (142.3 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
Identities = 127/459 (27%), Positives = 217/459 (47%)
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--QSGRELHNLKRVAPDI 190
+D S + +GH PV L+FDP +LAS G+V W++ Q+ L + D+
Sbjct: 1 MDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQKCNDV 60
Query: 191 GSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLSWSPN 248
+ S+ L+W P G+ LA+P ++ V +Y R++ F L + + Q + ++WSP
Sbjct: 61 -INAKSICRLAWQPKSGKLLAIP-VEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSPC 118
Query: 249 GKYMATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGKYGVWE 306
G+Y+A S++ I++W+V K ++R K + IC +AW P ++ D G G+ E
Sbjct: 119 GQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLLE 178
Query: 307 SVVPSSMKSPTEDIPSS-RSNYNGLL-----------LFDEEEKEPSTSGSLSDLGEDSH 354
+V S K+ + + S +YN L L D + PS S + + +D
Sbjct: 179 NVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMSNAGDFLNDNAVEIPSFSKGI--INDDED 236
Query: 355 GESEMPSRKRLRKQTXXXXXXXXXXXXXXXXXPKTESRKKAHSTHKEYSDKGN-GS---R 410
E M + R R+++ KT S S KE + G GS
Sbjct: 237 DEDLMMASGRPRQRSHILEDDENSVDISML---KTGS-----SLLKEEEEDGQEGSIHNL 288
Query: 411 SMRTSTRK--------NMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDF 462
+ TS R Q+ FQ G+TP+ RF+ +N +G I + + I+++F
Sbjct: 289 PLVTSQRPFYDGPMPTPRQKPFQSGSTPLHL-THRFMVWNSIGIIRCYNDEQDNAIDVEF 347
Query: 463 HDTGRGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMY-RPFSSWANNSEWSM 521
HDT +++ +T+A L+ + A C+ +++ ++ FSSW ++ EW +
Sbjct: 348 HDTSIH-HATHLSNTLNYTIADLSHEAILLA--CESTDELASKLHCLHFSSWDSSKEWII 404
Query: 522 RF-EGEEVKAVALGTAWVAAVTSLNFLRIFTEGGFQDQL 559
+ E+++A+ LG W AA TS LR+FT GG Q ++
Sbjct: 405 DLPQNEDIEAICLGQGWAAAATSALLLRLFTIGGVQKEV 443
Score = 239 (89.2 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
Identities = 77/297 (25%), Positives = 136/297 (45%)
Query: 549 IFTEGGFQDQLAVVTHVS---DCDQMLEFRVFNIAKGTEP-LKGR-LPLTPGSQLTWFGF 603
+ + G +QL +V H D DQ L ++ + K + L G LPLT S L W GF
Sbjct: 450 VVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGDPLPLTRKSYLAWIGF 509
Query: 604 SEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKD-KKSDENYWIVGL--NASKLFCIVC 660
S EG DS+GI+R+ G +W PI + + K ++YW+VG+ N +L CI C
Sbjct: 510 SAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPC 569
Query: 661 KNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMN---NFHLSQIPKRMEEVTD 717
K FP +P+P + +L P +E +F + + HL + K E +
Sbjct: 570 KG-SRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYEE 628
Query: 718 AGLDTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVT 777
+ + ++ + Q +++++A C ++ R EL L++ ++ AIK +
Sbjct: 629 STKNQATKE---------QQELLMKMLALSCKLEREFRCVELADLMT-QNAVNLAIKYAS 678
Query: 778 KLKLPNLAERFNSILEERLLSETKETPNTTLLISNNNVTARGDVDVSKASTSTERSE 834
+ + LA++ L E + + E T + R ++ ++T+TE S+
Sbjct: 679 RSRKLILAQK----LSELAVEKAAELTATQVEEEEEEEDFRKKLNAGYSNTATEWSQ 731
Score = 61 (26.5 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 34/139 (24%), Positives = 58/139 (41%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF--------QTNIT 100
+ S+ K R H V +L+ P LAS S D SV++++ + N
Sbjct: 1 MDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQKCNDV 60
Query: 101 RFTLPIRVLAFN-KSGSMLAAAGDDEGIKLINTIDGSIARVLKGH--KGPVTGLAFDPNS 157
I LA+ KSG +LA + + +KL S L + + + + P
Sbjct: 61 INAKSICRLAWQPKSGKLLAIPVE-KSVKLYRRESWSHQFDLSDNFISQTLNIVTWSPCG 119
Query: 158 EYLASIDSIGTVIYWELQS 176
+YLA+ G +I W +++
Sbjct: 120 QYLAAGSINGLIIVWNVET 138
Score = 58 (25.5 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
Identities = 16/76 (21%), Positives = 40/76 (52%)
Query: 806 TTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPSVKFSLPIFKKKVKSPEEIKLGNE 865
+T ++ N +++ +S+ +T+ E+S +++P++P K P K+ + + N
Sbjct: 809 STNILDNMGKSSKKSTALSR-TTNNEKSPIIKPLIPKPK---P---KQASAASYFQKRNS 861
Query: 866 PTIQNQKAKVDNNREV 881
T + ++ K +N + V
Sbjct: 862 QTNKTEEVKEENLKNV 877
Score = 48 (22.0 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 885 ED-NNAGAVTKVEKTKIQSQHPP--NVFFKSSNNQENTNKAGEVNXXXXXXXXXXNPF 939
ED ++G EK +I H P N F KS+N+ + + K+G V NPF
Sbjct: 740 EDAEDSGEADDEEKPEI---HKPGQNSFSKSTNSSDVSAKSGAVTFSSQGRV---NPF 791
Score = 39 (18.8 bits), Expect = 5.6e-16, Sum P(3) = 5.6e-16
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 13 KCG---NAASFCSILWDQQAHHLVTASSSETTISIH 45
KC NA S C + W ++ L+ A E ++ ++
Sbjct: 56 KCNDVINAKSICRLAWQPKSGKLL-AIPVEKSVKLY 90
Score = 37 (18.1 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 686 SSDLGAETLENEFMMNNFHLSQIPKRMEEVTDAGLDTSSLDD 727
S+ GA T ++ +N F +S K ++ T+ LD+
Sbjct: 774 SAKSGAVTFSSQGRVNPFKVSASSKEPAMSMNSARSTNILDN 815
>UNIPROTKB|G4MNU5 [details] [associations]
symbol:MGG_06969 "Minichromosome loss protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001231 KO:K11274 InterPro:IPR022100
Pfam:PF12341 RefSeq:XP_003709714.1 EnsemblFungi:MGG_06969T0
GeneID:2685142 KEGG:mgr:MGG_06969 Uniprot:G4MNU5
Length = 854
Score = 469 (170.2 bits), Expect = 4.9e-51, Sum P(2) = 4.9e-51
Identities = 130/498 (26%), Positives = 230/498 (46%)
Query: 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAG 122
G +A++ GS D +V L+ F+T + R LPIR +A + G A AG
Sbjct: 55 GEQNVAVAATDRFFVVGSEDGTVSLFSLETHSFETYLLRTGLPIRDIALSSDGKWCAVAG 114
Query: 123 DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR-ELH 181
D+ +K+++T D ++ R + H P ++FDP L + G + + L S + EL
Sbjct: 115 DELTVKIVSTTDNTVVRHAREHGRPTKHVSFDPKGSTLTLSCTDGAIYIYSLTSEQPEL- 173
Query: 182 NLKRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
++++ +GS + + + W PDG AVP D+ + ++ EK H
Sbjct: 174 -IRKIDGILGSLEMESEASGRVVWHPDGRAFAVPTPTRDIEVVSKNDWEKQRVFANGHEG 232
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDV 298
I ++WSPNG +AT++ D ++LIW+ + I R + + I + W P N ++
Sbjct: 233 DITAMAWSPNGSMIATAAKDGKLLIWESRGQSVIARHSYAN-IMDIVWHPKANIVSFTTF 291
Query: 299 MGKYGVWESVVPSSMKSPTEDIPSSRSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESE 358
G+ + V + +P +P S + + D P S++ +G E
Sbjct: 292 AGEVFICADFVTADF-TPLLQLPLQASPF----IHD-----PLAEVSVNARRPAINGSKE 341
Query: 359 MPSRKRLRKQTXXXXXXXXXXXXXXXXXPKTESRKKAHSTH--KEYSDKGNGSRSMRTST 416
+PSR R + +++ + Y G G + +
Sbjct: 342 IPSRPRRDSLNSLDSFAGGIPEDEDDFVVDDDGAGYTLNSNGKRPYDGTGVGEHANKRPN 401
Query: 417 --RKNMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVPSM 474
R EAFQPG+TP + G R++LC N+ G + T++ D + + ++F+D R
Sbjct: 402 MLRPQYHEAFQPGSTPWR-GNRKYLCLNLTGFVWTVDQDSHHTVTVEFYDHELH-RDFHF 459
Query: 475 TDYFGFTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFE-GEEVKAVAL 533
TD F + A L+E+G++F+ P + +K + L YRP +W S+W + GE V A++L
Sbjct: 460 TDTFLYDKACLSEHGTLFSCPPRDDKP-AVLFYRPHETWTQRSDWRTQLPAGEAVLAMSL 518
Query: 534 GTAWVAAVTSLNFLRIFT 551
++V T+ ++R+FT
Sbjct: 519 SDSFVTVTTTAGYVRVFT 536
Score = 140 (54.3 bits), Expect = 4.9e-51, Sum P(2) = 4.9e-51
Identities = 50/189 (26%), Positives = 87/189 (46%)
Query: 592 LTPGSQLTWFGFSEEGQLSSYDSKGILRV---YTNLYGGSWLPIF-----SASKDKKSDE 643
L G+ + FS++G YDS G L + SW+P+ S + E
Sbjct: 599 LPEGATVKSVFFSDDGDPCIYDSTGTLLTLLHWRQPSRASWVPLLDTKLLSRLASGRKHE 658
Query: 644 NYWIVGLNASKLFCIVCKNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNNF 703
+Y+ + + K CI+ K D +P P+P+L+ + S PLAS+ G++ + +N+
Sbjct: 659 SYYPIAVADHKFHCIILKGGDQYPY-FPRPLLSEFEFSVPLASAPSGSKKKKQ---LNSD 714
Query: 704 HLSQIPKRMEEVTDAGLDTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATE--LVK 761
EE D G +T LD + F L + + +L ++ S + RA + L +
Sbjct: 715 GADGSEDEEEE--DEGAETQKLDQQ-FLLRSIRAAQVLDVLESSSTSKSVSRAQQQSLAR 771
Query: 762 L-LSLDKSM 769
L L +DK++
Sbjct: 772 LELEIDKTL 780
Score = 99 (39.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 56/261 (21%), Positives = 105/261 (40%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H +G T A +PN + L + +++++ YK NI + +A +
Sbjct: 12 HTEGTTHCAYTPNGSQLVTVGSNNTIRCYKTGSDGEPKNID--DCGEQNVAVAATDRFFV 69
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
+D + L + S L P+ +A + ++ A TV ++ S +
Sbjct: 70 VGSEDGTVSLFSLETHSFETYLLRTGLPIRDIALSSDGKWCAVAGDELTV---KIVSTTD 126
Query: 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE-----KLFSLRG 234
+ + R A + G P+ +S+ P G TL + + +Y + + K+ + G
Sbjct: 127 -NTVVRHAREHGR-PTKH--VSFDPKGSTLTLSCTDGAIYIYSLTSEQPELIRKIDGILG 182
Query: 235 D---HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF-----DDRICCMAW 286
+ + W P+G+ A + R I +V K D ++Q+ + I MAW
Sbjct: 183 SLEMESEASGRVVWHPDGRAFAVPTPTRDI---EVVSKNDWEKQRVFANGHEGDITAMAW 239
Query: 287 KPIGNALAVIDVMGKYGVWES 307
P G+ +A GK +WES
Sbjct: 240 SPNGSMIATAAKDGKLLIWES 260
Score = 54 (24.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
H +TA+A SPN + +A+ + D + +++ G
Sbjct: 230 HEGDITAMAWSPNGSMIATAAKDGKLLIWESRG 262
Score = 51 (23.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
+GH T A+ PN L ++ S T+ ++ S E N+
Sbjct: 10 QGHTEGTTHCAYTPNGSQLVTVGSNNTIRCYKTGSDGEPKNI 51
Score = 45 (20.9 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 226 AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
A + + R H + +++PNG + T + I + G D + + DD
Sbjct: 2 ASRRYVPRQGHTEGTTHCAYTPNGSQLVTVGSNNTIRCYKTGS--DGEPKNIDD 53
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 14 CGNAASFCSILW--DQQAHHLVT 34
C N F +W DQ +HH VT
Sbjct: 426 CLNLTGF---VWTVDQDSHHTVT 445
>ASPGD|ASPL0000031843 [details] [associations]
symbol:sepB species:162425 "Emericella nidulans"
[GO:0090529 "cell septum assembly" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005658 "alpha
DNA polymerase:primase complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001305 InterPro:IPR022100
Pfam:PF12341 OMA:MLKTGSS ProteinModelPortal:C8VF02
EnsemblFungi:CADANIAT00003124 Uniprot:C8VF02
Length = 836
Score = 272 (100.8 bits), Expect = 8.2e-50, Sum P(3) = 8.2e-50
Identities = 77/313 (24%), Positives = 140/313 (44%)
Query: 9 REAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALA 68
R AH G + + +++T S+ + I I+ PK + D LA
Sbjct: 10 RPAHTPGTTV----LTYTPDGRYIITGGSN-SAIRIYTDGEDGE-PKTVEEGADA--HLA 61
Query: 69 LSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128
+ + G+ D +V Y+ G +TR L +R +A K +A A D+ +K
Sbjct: 62 IGATNEYFFMGAEDGTVWQYEVKSGRMDKLLTRTALAVRDIAITKDNGWVAVASDELTVK 121
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS-----GRELHN- 182
L+N D + + ++ + FDPN Y+A + G V + + + R+L
Sbjct: 122 LVNIEDMTKVKYMREQTKGTKHITFDPNGRYVAVSCTDGIVYLYSMDTEEPELARKLDGV 181
Query: 183 LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICF 242
++R+ P+ D ++ V+ W PDG A D+ ++ +K S G H I
Sbjct: 182 IRRLEPE---DEATARVV-WHPDGTAFATADASRDIALFSVGEWKKEMSFSGGHNGDITA 237
Query: 243 LSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKY 302
+SWSPNG M T++ D Q+L+W+ + + R F + + +AW P N +++ G+
Sbjct: 238 MSWSPNGALMVTAAKDGQVLLWESKTQKILHRYNFPN-VINLAWHPTKNGVSLTTSDGEI 296
Query: 303 GVWESVVPSSMKS 315
+++ VP ++
Sbjct: 297 FIFDGFVPKDYQA 309
Score = 237 (88.5 bits), Expect = 8.2e-50, Sum P(3) = 8.2e-50
Identities = 51/158 (32%), Positives = 94/158 (59%)
Query: 398 THKEYSD-KGNGSRSMRTSTRK-NMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGY 455
T+K D +G+ + TS K + QPG+TP + G RR+LC N+ G + T++ + +
Sbjct: 385 TNKHLGDIEGHMDKRTLTSFPKPKIHPPLQPGSTPWR-GNRRYLCLNLTGAVWTVDQETH 443
Query: 456 SHIEIDFHDTGRGPRVPSMTDYFGFTMASLNENGSVFAN-PCKGEKNMSTLMYRPFSSWA 514
+ + ++F+D R TD F + A LNENG++F+N P + + +T+ YRP +W
Sbjct: 444 NTVTVEFYDRELH-RDFHFTDPFLYDRACLNENGALFSNNPV--DDSPATIFYRPHETWT 500
Query: 515 NNSEWSMRF-EGEEVKAVALGTAWVAAVTSLNFLRIFT 551
++W +GE ++A+AL +++ AVT+ +++R++T
Sbjct: 501 TRADWKTTLPKGEHIRALALSDSYIVAVTTKDYVRVYT 538
Score = 148 (57.2 bits), Expect = 8.2e-50, Sum P(3) = 8.2e-50
Identities = 52/226 (23%), Positives = 101/226 (44%)
Query: 595 GSQLTWFGFSEEGQLSSYDSKGILRV--YTNLYGGS-WLPIFSASK-----DKKSDENYW 646
G++L F++ G YD++G+L V + G + W+P+ + + +E YW
Sbjct: 604 GAELKSVFFTDMGDPCIYDTEGVLLVLQHWRTQGQARWVPLLDTKQLERLASGRKEETYW 663
Query: 647 IVGLNASKLFCIVCKNPDLFPQVMPKPVLTLLDLSFPLASS------DLGAETLENEFMM 700
V + K CI+ K D +P P+P+L+ D P++ D T N+ M
Sbjct: 664 PVAVAQDKFHCIILKGGDRYPY-FPRPMLSEFDFQIPISDKPKPQEEDEEGSTARNDSMR 722
Query: 701 --NNFHLSQIPKRM-EEVTDAGLDTSSLDDEAFNLEAAQDRCILRLIA-SCCNGDKL-VR 755
+F + + +++ A T++ E E D+ +L+L+A C G++ ++
Sbjct: 723 LEESFVRGNLLLSLFQDLLSATHATATQRAELSRKELELDKVLLQLLAIECREGEERGMK 782
Query: 756 ATELVKLLS--LDKSMQGAIKLVTKLKLPNLAERFNSILEERLLSE 799
A ELV ++ K ++ A+K+ + L ++ + R E
Sbjct: 783 ALELVHMMKDRNGKMVEAAVKVAQRYNRGVLEDKIRDLAARRYAGE 828
>UNIPROTKB|F1SSP1 [details] [associations]
symbol:WDHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070829 "heterochromatin maintenance" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=IEA] [GO:0033044
"regulation of chromosome organization" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00390000002030 InterPro:IPR022100
Pfam:PF12341 InterPro:IPR013979 Pfam:PF08662 EMBL:CU480474
Ensembl:ENSSSCT00000005569 Uniprot:F1SSP1
Length = 550
Score = 319 (117.4 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 85/295 (28%), Positives = 153/295 (51%)
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG 135
L + +++++++ FP G +TRFT + FN+ G+ +AA D +K+++ +D
Sbjct: 4 LVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVIFNEDGTKIAAGSSDFLVKVVDVMDC 63
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--QSGRELHNLKRVAPDIGSD 193
S + +GH PV L+FDP +LAS G+V W++ Q+ L + D+ +
Sbjct: 64 SQQKTFRGHDAPVLSLSFDPKDIFLASSSCDGSVKVWQISDQTCAISWPLLQKCNDV-IN 122
Query: 194 PSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV-QPICFLSWSPNGKY 251
S+ L+W P G+ LAVP ++ V +Y R+T F L + + Q + ++WSP G+Y
Sbjct: 123 AKSICRLAWQPKSGKLLAVP-VEKSVKLYRRETWSNQFDLSDNFISQTLNIVTWSPCGQY 181
Query: 252 MATSSLDRQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGNALAVIDVMGKYGVWESVV 309
+A S++ I++W+V K ++R K + IC ++W P +A D G G+ E+V
Sbjct: 182 LAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLSWHPTCGQIAYTDAEGNLGLLENVC 241
Query: 310 PSSMKSPTEDIPSS-RSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMPSRK 363
+ K + S +YN L FD ++ +G++ D D+ E+ S++
Sbjct: 242 DPNGKMSGSKVSSRVERDYNDL--FDGDD-----TGNVGDFPNDNAVETHSFSKE 289
Score = 193 (73.0 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 44/141 (31%), Positives = 77/141 (54%)
Query: 421 QEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVPSMTDYFGF 480
Q+ FQ G+TP+ RF+ +N +G I + + I+++FHDT +++ +
Sbjct: 367 QKPFQSGSTPLHL-THRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIH-HATHLSNTLNY 424
Query: 481 TMASLNENGSVFANPCKGEKNMSTLMY-RPFSSWANNSEWSMRFE-GEEVKAVALGTAWV 538
T+A L+ + A C+ +++ ++ FSSW ++ EW + E+++AV LG W
Sbjct: 425 TVADLSHEAILLA--CESTDELASKLHCLHFSSWDSSKEWIVDMPPNEDIEAVCLGQGWA 482
Query: 539 AAVTSLNFLRIFTEGGFQDQL 559
AA TS LR+FT GG Q ++
Sbjct: 483 AAATSSLLLRLFTIGGVQKEV 503
Score = 128 (50.1 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 52/225 (23%), Positives = 100/225 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPK-ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
LVTA S+ T I +H P +P IL + + + T +A+GS D VK+
Sbjct: 4 LVTAVSNNT-IQVHT--FPEGVPDGILTRFTTNANHVIFNEDGTKIAAGSSDFLVKVVDV 60
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA---RVLKGHKGP 147
Q P+ L+F+ LA++ D +K+ D + A +L+
Sbjct: 61 MDCSQQKTFRGHDAPVLSLSFDPKDIFLASSSCDGSVKVWQISDQTCAISWPLLQKCNDV 120
Query: 148 VTG-----LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSW 202
+ LA+ P S L ++ +V + ++ +L + + S ++N+++W
Sbjct: 121 INAKSICRLAWQPKSGKLLAVPVEKSVKLYRRETWSNQFDL---SDNFISQ--TLNIVTW 175
Query: 203 SPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP 247
SP G+ LA + +++++ +T + + ++ + IC LSW P
Sbjct: 176 SPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLSWHP 220
Score = 44 (20.5 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 13 KCG---NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHH-RDGVTALA 68
KC NA S C + W ++ L+ A E ++ ++ SN + + + +
Sbjct: 116 KCNDVINAKSICRLAWQPKSGKLL-AVPVEKSVKLYRRETWSNQFDLSDNFISQTLNIVT 174
Query: 69 LSPNSTCLASGSID 82
SP LA+GSI+
Sbjct: 175 WSPCGQYLAAGSIN 188
>FB|FBgn0033890 [details] [associations]
symbol:Ctf4 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0042023 "DNA
endoreduplication" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0035185 "preblastoderm mitotic cell cycle"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0042023
GeneTree:ENSGT00390000002030 KO:K11274 InterPro:IPR022100
Pfam:PF12341 GO:GO:0035185 OMA:MLKTGSS FlyBase:FBgn0033890
EMBL:BT023774 RefSeq:NP_610921.1 UniGene:Dm.611 SMR:Q494K2
STRING:Q494K2 EnsemblMetazoa:FBtr0087606 GeneID:36551
KEGG:dme:Dmel_CG13350 UCSC:CG13350-RA CTD:36551 InParanoid:Q494K2
GenomeRNAi:36551 NextBio:799165 Uniprot:Q494K2
Length = 895
Score = 239 (89.2 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 111/453 (24%), Positives = 196/453 (43%)
Query: 421 QEAFQPGATPVQPGKRRFLCYNMLGTITT-MEHDGYSHIEIDFHDTGRGPRVPSMTDYFG 479
Q AFQP ATP + R++ +N +G +T +E G S I+++FHD + +++Y
Sbjct: 391 QTAFQPSATPADL-EHRYMAWNDVGIVTAHVEPSGDSSIDVEFHDASIHHAL-HISNYNQ 448
Query: 480 FTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEG----EEVKAVALGT 535
+AS++ A+ + + L W+ + E + AVA +
Sbjct: 449 HNLASVSSGALALASNESSKLVVIALAAAGNKEWSLSLPDCESAEAVVATRFLVAVATSS 508
Query: 536 AWVAAVTSLNFLR-IFT-EG------GFQDQLAVVTHVS---DCDQMLEFRVFNIAKGTE 584
+++ T + R + T G G + L VV H S Q L + NI G
Sbjct: 509 SFLRIFTVMGTQREVLTIPGPMVAIAGHEHSLMVVYHSSAPSQTQQHLAAMLVNI-NGLS 567
Query: 585 PLKGRLP--LTPGSQLTWFGFSEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKDKKS- 641
+ LP LTPG QLTWFG+S+ G S D+ G+L++Y +W PI K S
Sbjct: 568 LRQEYLPVPLTPGRQLTWFGYSDTGSPSIADNMGLLQLYRRS-SNAWFPICDTMKQSTSV 626
Query: 642 DENYWIVGLNASKLF--CIVCKNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFM 699
N+++V ++ + ++C+ +P P+P+L L + PL ++ LE+ +
Sbjct: 627 SHNFFVVAVSEKRQIVQAVLCRGTS-YPMTNPRPMLQELRMQIPLCDVEVEKSELEDALL 685
Query: 700 MNNFHLSQIPKRMEEVTDAGLD----TSSLDDEAFNL-EAAQDRCILRL-IASCCNGDKL 753
++ ++M++ T L +S + A L E+ +L+L + ++
Sbjct: 686 RSSLMQMDGAEKMQKETAIKLFALACSSECETRARELIESIACTDLLQLAVKYATKRGRI 745
Query: 754 VRATELVKLLSLDKSMQGAIKLVTKLKLPNLAERFNSILEERLLSETKETPNTTLLISNN 813
+ L +LL +++Q A K T L +A + S++ P L S
Sbjct: 746 HLSDRLCELLPQLEAVQEARKQQTLLGASGIAATIVLPMTPTSASQSGPKPKAIELSSAK 805
Query: 814 NVTARGDVD---VSKASTSTERSEMVEP-IVPS 842
T + V+ + KA+ ++ S P I PS
Sbjct: 806 RGTLKRLVNSPNMFKAAAASAASRPSTPDITPS 838
Score = 215 (80.7 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 77/305 (25%), Positives = 136/305 (44%)
Query: 8 LREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL 67
LR A + + + +L+ + ++T + + I H + + P R G +
Sbjct: 4 LRSALRYAHTNGYTGLLYTPRGEFIITCGT-DGDIR-HWTCISDDDP---RSSCLGEFVM 58
Query: 68 ALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGI 127
++ T L + + +++ Y FP + + RFT P L SG AA +D I
Sbjct: 59 CIAHTGTRLLASTDRNTIHAYTFPEMDSDGILMRFTAPATCLKV--SGGYTAAGSEDTTI 116
Query: 128 KLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVA 187
K++ VL+GH GP+ L + L S+ G + W + G+EL + +
Sbjct: 117 KVLKGDTAGNETVLEGHTGPILALDLFAERKLLVSVAGDGQLKVWNFEEGKELKTIGGL- 175
Query: 188 PDIGS-DPSSM-NVLSWSPD-GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP--ICF 242
P + S + +S+ + P GE LA + N++V+ + E F LR D V C
Sbjct: 176 PKVNSFESASLYGTPHFEPQSGELLAY-AVDNEIVVLNTANWEVAFKLRDDSVSSNYSC- 233
Query: 243 LSWSPNGKYMATSSLDRQILIWDVGKK--LDIDRQKFD-DRICCMAWKPIGNA-LAVIDV 298
+SPNG+ +A + ++ I+DV K+ + ++ D + I C+AW G +A D
Sbjct: 234 CQFSPNGERLAAGTTKGEVSIFDVKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDA 293
Query: 299 MGKYG 303
G+ G
Sbjct: 294 TGQLG 298
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 301 (111.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 90/302 (29%), Positives = 147/302 (48%)
Query: 7 KLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTA 66
+L++ K G+ ++ + HLV+ S + TI + D L S L + L H V A
Sbjct: 993 ELQQTFK-GHDLWIRAVAFSPDGKHLVSGSD-DNTIKLWD-LATSELQQSLEDHSRSVHA 1049
Query: 67 LALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEG 126
+A SP+ LAS S+D ++KL+ GE Q + + +R + F+ G +LA+ D
Sbjct: 1050 VAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGT 1109
Query: 127 IKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRV 186
IKL N + G + + L G V +AF P+ + LAS T+ W+ +G L L+
Sbjct: 1110 IKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLE-- 1167
Query: 187 APDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWS 246
G +V+ +SPDG+ LA ++D T E L G H + + +++S
Sbjct: 1168 ----GHSDRIQSVV-FSPDGKLLASGSYDQTAKLWDPATGELLQIFEG-HSKWVESVAFS 1221
Query: 247 PNGKYMATSSLDRQILIWD--VGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGV 304
P+GK +A+SS I +WD G+ L D+ +A+ P GN LA +D+ +
Sbjct: 1222 PDGKLLASSSYGETIKLWDPVTGELLQTLNDP-DESAGSVAFSPDGNRLASVDIFDTK-I 1279
Query: 305 WE 306
W+
Sbjct: 1280 WD 1281
Score = 297 (109.6 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 93/345 (26%), Positives = 162/345 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S S+ + L +AS ++TI I D L L + L H V ++A SP+
Sbjct: 832 GHPHSIWSVAFAPDGKELASASD-DSTIKIWD-LATGELQQTLDSHSQSVRSVAFSPDGK 889
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
LAS S+D ++K++ GE Q ++ + ++ +AF+ G LA+ + +KL N
Sbjct: 890 LLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPAT 949
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + + L+GH V +AF P+ + LAS S T+ W +G K G D
Sbjct: 950 GELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK------GHD- 1002
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
+ +++SPDG+ L N + ++D T+E SL DH + + +++SP+ K +A+
Sbjct: 1003 LWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLE-DHSRSVHAVAFSPDDKQLAS 1061
Query: 255 SSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSM 313
SSLD I +WD +L + + + + P G LA G +W +
Sbjct: 1062 SSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ 1121
Query: 314 KSPTEDIPSSRSNYNGLLLFDEEEKEPSTS--GSLSDLGEDSHGE 356
++ T RS++ + F + K+ ++ S L + + GE
Sbjct: 1122 QTLT-----GRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGE 1161
Score = 290 (107.1 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 97/336 (28%), Positives = 158/336 (47%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+++ LV+ S +T + I DP L + L H V +LA SP+ LASGS
Sbjct: 755 SVVFSPDGKQLVSGSYDDT-VKIWDPAT-GELLQTLDGHSGTVESLAFSPDGKLLASGSY 812
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D+++ L+ GE I +AF G LA+A DD IK+ + G + + L
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTL 872
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
H V +AF P+ + LAS T+ W +G +L+ + + S ++
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKS-------VA 925
Query: 202 WSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQI 261
+SPDG+ LA KN V +++ T E L +L G H Q + +++SP+GK +A+SS D I
Sbjct: 926 FSPDGKKLASGSEKNTVKLWNPATGELLQTLEG-HSQSVRSVAFSPDGKQLASSSSDTTI 984
Query: 262 LIWD-VGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTEDI 320
+W+ +L + D I +A+ P G L +W+ + S ++ ED
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD-LATSELQQSLED- 1042
Query: 321 PSSRSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGE 356
SRS + D+++ S+ S L + + GE
Sbjct: 1043 -HSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGE 1077
Score = 232 (86.7 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L +H V ++ SP+ L SGS D +VK++ GE + + + LAF+ G
Sbjct: 746 LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGK 805
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D I L ++ G + + +GH + +AF P+ + LAS T+ W+L +
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT 865
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G EL + S S+ +++SPDG+ LA L + + +++ T E SL G
Sbjct: 866 G-ELQQT------LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 237 --VQPICFLSWSPNGKYMATSSLDRQILIWD--VGKKLDIDRQKFDDRICCMAWKPIGNA 292
V+ + F SP+GK +A+ S + +W+ G+ L + + +A+ P G
Sbjct: 919 GWVKSVAF---SPDGKKLASGSEKNTVKLWNPATGELLQT-LEGHSQSVRSVAFSPDGKQ 974
Query: 293 LAVIDVMGKYGVWES 307
LA +W S
Sbjct: 975 LASSSSDTTIKLWNS 989
Score = 169 (64.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/168 (29%), Positives = 79/168 (47%)
Query: 139 RVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMN 198
+ L+ H GPV + F P+ + L S TV W+ +G L L + + S
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVES------ 797
Query: 199 VLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258
L++SPDG+ LA N + ++D T E L + G H I ++++P+GK +A++S D
Sbjct: 798 -LAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEG-HPHSIWSVAFAPDGKELASASDD 855
Query: 259 RQILIWDVGK-KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVW 305
I IWD+ +L + +A+ P G LA + VW
Sbjct: 856 STIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 258 (95.9 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 69/233 (29%), Positives = 116/233 (49%)
Query: 37 SSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95
SS T S P+ P+ K L H V+++ SPN LAS S D +K++ G+F
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 96 QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP 155
+ I+ L I +A++ ++L +A DD+ +K+ + G + LKGH V F+P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215
S + S +V W++++G+ L L P SDP S + ++ DG +
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTL----P-AHSDPVS--AVHFNRDGSLIVSSSYD 192
Query: 216 NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
++D + + L +L D P+ F+ +SPNGKY+ ++LD + +WD K
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 62/283 (21%), Positives = 124/283 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + S+ + L + SS++ I I K + H+ G++ +A S +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSN 100
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +++ +
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ + F+ + + S G W+ SG+ L L I D
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDN 214
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
++ + +SP+G+ + L N + ++D + L + G + C F ++S GK++
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ S D + IW++ K + + Q D + A P N +A
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Score = 183 (69.5 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W ++ LV+AS +T + I D + K L+ H + V +P S
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKT-LKIWD-VSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L G
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT------GHK 256
Query: 194 PSSMNVLS-WSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + +S G V G ++++V +++ T E + L+G H + + P
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-HTDVVISTACHPTENI 315
Query: 252 MATSSL--DRQILIW 264
+A+++L D+ I +W
Sbjct: 316 IASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 258 (95.9 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 69/233 (29%), Positives = 116/233 (49%)
Query: 37 SSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95
SS T S P+ P+ K L H V+++ SPN LAS S D +K++ G+F
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 96 QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP 155
+ I+ L I +A++ ++L +A DD+ +K+ + G + LKGH V F+P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215
S + S +V W++++G+ L L P SDP S + ++ DG +
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTL----P-AHSDPVS--AVHFNRDGSLIVSSSYD 192
Query: 216 NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
++D + + L +L D P+ F+ +SPNGKY+ ++LD + +WD K
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 62/283 (21%), Positives = 124/283 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + S+ + L + SS++ I I K + H+ G++ +A S +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSN 100
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +++ +
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ + F+ + + S G W+ SG+ L L I D
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDN 214
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
++ + +SP+G+ + L N + ++D + L + G + C F ++S GK++
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ S D + IW++ K + + Q D + A P N +A
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Score = 183 (69.5 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W ++ LV+AS +T + I D + K L+ H + V +P S
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKT-LKIWD-VSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L G
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT------GHK 256
Query: 194 PSSMNVLS-WSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + +S G V G ++++V +++ T E + L+G H + + P
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-HTDVVISTACHPTENI 315
Query: 252 MATSSL--DRQILIW 264
+A+++L D+ I +W
Sbjct: 316 IASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 258 (95.9 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHS 84
+ +A A S+ T S P+ P+ K L H V+++ SPN LAS S D
Sbjct: 9 ETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 68
Query: 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
+K++ G+F+ I+ L I +A++ ++L +A DD+ +K+ + G + LKGH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204
V F+P S + S +V W++++G+ L L P SDP S + ++
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL----P-AHSDPVS--AVHFNR 181
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
DG + ++D + + L +L D P+ F+ +SPNGKY+ ++LD + +W
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 265 DVGK 268
D K
Sbjct: 242 DYSK 245
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 62/283 (21%), Positives = 124/283 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + S+ + L + SS++ I I K + H+ G++ +A S +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSN 100
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +++ +
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ + F+ + + S G W+ SG+ L L I D
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDN 214
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
++ + +SP+G+ + L N + ++D + L + G + C F ++S GK++
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ S D + IW++ K + + Q D + A P N +A
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Score = 183 (69.5 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W ++ LV+AS +T + I D + K L+ H + V +P S
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKT-LKIWD-VSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L G
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT------GHK 256
Query: 194 PSSMNVLS-WSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + +S G V G ++++V +++ T E + L+G H + + P
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-HTDVVISTACHPTENI 315
Query: 252 MATSSL--DRQILIW 264
+A+++L D+ I +W
Sbjct: 316 IASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 258 (95.9 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 69/233 (29%), Positives = 116/233 (49%)
Query: 37 SSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95
SS T S P+ P+ K L H V+++ SPN LAS S D +K++ G+F
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 96 QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP 155
+ I+ L I +A++ ++L +A DD+ +K+ + G + LKGH V F+P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215
S + S +V W++++G+ L L P SDP S + ++ DG +
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTL----P-AHSDPVS--AVHFNRDGSLIVSSSYD 192
Query: 216 NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
++D + + L +L D P+ F+ +SPNGKY+ ++LD + +WD K
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 62/283 (21%), Positives = 124/283 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + S+ + L + SS++ I I K + H+ G++ +A S +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSN 100
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +++ +
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ + F+ + + S G W+ SG+ L L I D
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDN 214
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
++ + +SP+G+ + L N + ++D + L + G + C F ++S GK++
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ S D + IW++ K + + Q D + A P N +A
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Score = 183 (69.5 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W ++ LV+AS +T + I D + K L+ H + V +P S
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKT-LKIWD-VSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L G
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT------GHK 256
Query: 194 PSSMNVLS-WSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + +S G V G ++++V +++ T E + L+G H + + P
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-HTDVVISTACHPTENI 315
Query: 252 MATSSL--DRQILIW 264
+A+++L D+ I +W
Sbjct: 316 IASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 258 (95.9 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 69/233 (29%), Positives = 116/233 (49%)
Query: 37 SSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95
SS T S P+ P+ K L H V+++ SPN LAS S D +K++ G+F
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 96 QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP 155
+ I+ L I +A++ ++L +A DD+ +K+ + G + LKGH V F+P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215
S + S +V W++++G+ L L P SDP S + ++ DG +
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTL----P-AHSDPVS--AVHFNRDGSLIVSSSYD 192
Query: 216 NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
++D + + L +L D P+ F+ +SPNGKY+ ++LD + +WD K
Sbjct: 193 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 62/283 (21%), Positives = 124/283 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + S+ + L + SS++ I I K + H+ G++ +A S +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSN 100
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +++ +
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ + F+ + + S G W+ SG+ L L I D
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDN 214
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
++ + +SP+G+ + L N + ++D + L + G + C F ++S GK++
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ S D + IW++ K + + Q D + A P N +A
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Score = 183 (69.5 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W ++ LV+AS +T + I D + K L+ H + V +P S
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKT-LKIWD-VSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L G
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT------GHK 256
Query: 194 PSSMNVLS-WSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + +S G V G ++++V +++ T E + L+G H + + P
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-HTDVVISTACHPTENI 315
Query: 252 MATSSL--DRQILIW 264
+A+++L D+ I +W
Sbjct: 316 IASAALENDKTIKLW 330
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 254 (94.5 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 69/244 (28%), Positives = 119/244 (48%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHS 84
+ +A + SS S P+ P+ K L H V+++ SPN LAS S D
Sbjct: 9 ETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 68
Query: 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
+K++ G+F+ I+ L I +A++ ++L +A DD+ +K+ + G + LKGH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204
V F+P S + S +V W++++G+ L L P SDP S + ++
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL----P-AHSDPVS--AVHFNR 181
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
DG + ++D + + L +L D P+ F+ +SPNGKY+ ++LD + +W
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 265 DVGK 268
D K
Sbjct: 242 DYSK 245
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 61/283 (21%), Positives = 123/283 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + S+ + L + SS++ I I K + H+ G++ +A S +S
Sbjct: 43 GHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSN 100
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +++ +
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ + F+ + + S G W+ SG+ L L I D
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDN 214
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
++ + +SP+G+ + L N + ++D + L + + C F ++S GK++
Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWI 274
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ S D + IW++ K + + Q D + A P N +A
Sbjct: 275 VSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIA 317
Score = 183 (69.5 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 57/254 (22%), Positives = 114/254 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W ++ LV+AS +T + I D + K L+ H + V +P S
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKT-LKIWD-VSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L +
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-----CHKN 257
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYM 252
++S G V G ++++V +++ T E + L+G H + + P +
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQG-HTDVVISTACHPTENII 316
Query: 253 ATSSL--DRQILIW 264
A+++L D+ I +W
Sbjct: 317 ASAALENDKTIKLW 330
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 250 (93.1 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 65/223 (29%), Positives = 112/223 (50%)
Query: 47 PLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP 105
P+ P+ K L H V+++ SPN LAS S D +K++ G+F+ I+ L
Sbjct: 4 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG 63
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165
I +A++ ++L +A DD+ +K+ + G + LKGH V F+P S + S
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 123
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225
+V W++++G+ L L P SDP S + ++ DG + ++D +
Sbjct: 124 DESVRIWDVKTGKCLKTL----P-AHSDPVS--AVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 226 AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
+ L +L D P+ F+ +SPNGKY+ ++LD + +WD K
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 219
Score = 196 (74.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 62/283 (21%), Positives = 124/283 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + S+ + L + SS++ I I K + H+ G++ +A S +S
Sbjct: 17 GHTKAVSSVKFSPNGEWLAS-SSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSN 74
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +++ +
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ + F+ + + S G W+ SG+ L L I D
Sbjct: 135 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDN 188
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
++ + +SP+G+ + L N + ++D + L + G + C F ++S GK++
Sbjct: 189 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 248
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ S D + IW++ K + + Q D + A P N +A
Sbjct: 249 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 291
Score = 183 (69.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W ++ LV+AS +T + I D + K L+ H + V +P S
Sbjct: 59 GHKLGISDVAWSSDSNLLVSASDDKT-LKIWD-VSSGKCLKTLKGHSNYVFCCNFNPQSN 116
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L G
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT------GHK 230
Query: 194 PSSMNVLS-WSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + +S G V G ++++V +++ T E + L+G H + + P
Sbjct: 231 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-HTDVVISTACHPTENI 289
Query: 252 MATSSL--DRQILIW 264
+A+++L D+ I +W
Sbjct: 290 IASAALENDKTIKLW 304
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 237 (88.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 60/220 (27%), Positives = 116/220 (52%)
Query: 47 PLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP 105
P P+ + K L+ H ++++ SP+ LAS S D ++K++ G+F+ +
Sbjct: 31 PQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEG 90
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165
I +A+++ ++ +A DD+ IK+ + G + + LKGHK V G++F+P S + S
Sbjct: 91 ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVV-MYDRD 224
V W++ +G K ++ SDP + + ++ DG TL V G + V ++D
Sbjct: 151 DENVRIWDVNTGE---CTKMISAH--SDP--VTGVHFNRDG-TLVVSGSYDGTVRIWDTT 202
Query: 225 TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
T + L ++ + + + F+ +SPNGK++ +LD + +W
Sbjct: 203 TGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 204 (76.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 62/284 (21%), Positives = 132/284 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S S+ + L +AS+ +T I I + L H++G++ +A S +S
Sbjct: 44 GHLKSISSVKFSPDGKWLASASADKT-IKIWGAY-DGKFERTLEGHKEGISDIAWSQDSK 101
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ S S D ++K++ G+ + + ++FN +++ + DE +++ +
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G +++ H PVTG+ F+ + + S GTV W+ +G+ L+ + D
Sbjct: 162 GECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIST------EDG 215
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQPIC-FLSWSPN-GKY 251
++ + +SP+G+ + L N + ++ + +K L + G + C F ++S GK+
Sbjct: 216 KEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKW 275
Query: 252 MATSSLDRQILIWDVGKKLDIDRQK-FDDRICCMAWKPIGNALA 294
+ T S D I I+++ + + +D + +A P N +A
Sbjct: 276 IVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIA 319
Score = 191 (72.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 56/253 (22%), Positives = 116/253 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ I W Q + L+ ++S + TI I D + + K L+ H++ V ++ +P S
Sbjct: 86 GHKEGISDIAWSQDSK-LICSASDDKTIKIWD-VESGKMVKTLKGHKEYVFGVSFNPQSN 143
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D +V+++ GE I+ + P+ + FN+ G+++ + D +++ +T
Sbjct: 144 LIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTT 203
Query: 135 GSIARVLKGHKGP-VTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + + G V+ + F PN +++ + T+ W + ++ LK
Sbjct: 204 GQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC--LKTYTGHKNEK 261
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253
+ S + G+ + N + +Y+ T E + +L G H + ++ P +A
Sbjct: 262 YCIFSTFSVTC-GKWIVTGSEDNLIYIYNLQTREIVQTLAG-HEDVVLTVACHPTENIIA 319
Query: 254 TSSL--DRQILIW 264
+ +L DR + IW
Sbjct: 320 SGALEKDRSVKIW 332
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
LKGH ++ + F P+ ++LAS + T+ W G+ L+ I SD +
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGI-SD------I 94
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQ 260
+WS D + + + ++D ++ + + +L+G H + + +S++P + + S D
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKG-HKEYVFGVSFNPQSNLIVSGSFDEN 153
Query: 261 ILIWDV 266
+ IWDV
Sbjct: 154 VRIWDV 159
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 240 (89.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 66/236 (27%), Positives = 118/236 (50%)
Query: 34 TASSSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+++S+++++S+ P+ K L H V+A+ SPN LAS S D +K++
Sbjct: 48 SSASNKSSLSVK----PNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYD 103
Query: 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152
G+F+ I+ L I +A++ +L + DD+ +K+ G + LKGH V
Sbjct: 104 GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCN 163
Query: 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212
F+P S + S +V W++++G+ L L P SDP S + ++ DG +
Sbjct: 164 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTL----P-AHSDPVS--AVHFNRDGSLIVSS 216
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
++D + + L +L D P+ F+ +SPNGKY+ ++LD + +WD K
Sbjct: 217 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 272
Score = 214 (80.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 61/265 (23%), Positives = 121/265 (45%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ +SS++ I I K + H+ G++ +A S +S L SGS D ++K+++
Sbjct: 87 LASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST 145
Query: 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152
G+ + + + FN +++ + DE +++ + G + L H PV+ +
Sbjct: 146 GKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH 205
Query: 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212
F+ + + S G W+ SG+ L L I D ++ + +SP+G+ +
Sbjct: 206 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------IDDDNPPVSFVKFSPNGKYILAA 259
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYMATSSLDRQILIWDVGKKL 270
L N + ++D + L + G + C F ++S GK++ + S D + IW++ K
Sbjct: 260 TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKE 319
Query: 271 DIDR-QKFDDRICCMAWKPIGNALA 294
+ + Q D + C A P N +A
Sbjct: 320 VVQKLQGHTDTVLCTACHPTENIIA 344
Score = 173 (66.0 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 55/255 (21%), Positives = 114/255 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + W + LV+ S +T + + + +L K L+ H + V +P S
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKT-LKVWELSTGKSL-KTLKGHSNYVFCCNFNPQSN 169
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D SV+++ G+ + + P+ + FN+ GS++ ++ D ++ +T
Sbjct: 170 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 229
Query: 135 GSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + L PV+ + F PN +Y+ + T+ W+ G+ L G
Sbjct: 230 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT------GHK 283
Query: 194 PSSMNVLS-WSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + +S G V G ++++V +++ + E + L+G H + + P
Sbjct: 284 NEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQG-HTDTVLCTACHPTENI 342
Query: 252 MATSSL--DRQILIW 264
+A+++L D+ I +W
Sbjct: 343 IASAALENDKTIKLW 357
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 63/273 (23%), Positives = 113/273 (41%)
Query: 47 PLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPI 106
P PS P L+ + G S NS+ AS SVK P + + T +
Sbjct: 23 PTAPSG-PNSLQPNSVGQPGATTSSNSS--ASNKSSLSVK----PNYTLKFTLAGHTKAV 75
Query: 107 RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI 166
+ F+ +G LA++ D+ IK+ DG + + GHK ++ +A+ +S L S
Sbjct: 76 SAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDD 135
Query: 167 GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA 226
T+ WEL +G+ L LK G + + +++P + V ++D T
Sbjct: 136 KTLKVWELSTGKSLKTLK------GHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 188
Query: 227 EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDR--ICCM 284
+ L +L H P+ + ++ +G + +SS D IWD + DD + +
Sbjct: 189 KCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 247
Query: 285 AWKPIGNALAVIDVMGKYGVWESVVPSSMKSPT 317
+ P G + + +W+ +K+ T
Sbjct: 248 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 280
>SGD|S000006339 [details] [associations]
symbol:CTF4 "Chromatin-associated protein" species:4932
"Saccharomyces cerevisiae" [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI;IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IGI;IMP]
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP;IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006270 "DNA replication initiation" evidence=IMP] [GO:0000727
"double-strand break repair via break-induced replication"
evidence=IMP] [GO:0043596 "nuclear replication fork" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0031298
"replication fork protection complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SGD:S000006339
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0001302 GO:GO:0003682 GO:GO:0006270 EMBL:BK006949 EMBL:U40829
GO:GO:0007064 GO:GO:0031298 GO:GO:0000727 EMBL:M94769 EMBL:S63246
PIR:A45039 RefSeq:NP_015461.1 ProteinModelPortal:Q01454 SMR:Q01454
DIP:DIP-4640N IntAct:Q01454 MINT:MINT-479487 STRING:Q01454
PaxDb:Q01454 PeptideAtlas:Q01454 EnsemblFungi:YPR135W GeneID:856254
KEGG:sce:YPR135W eggNOG:NOG323122 GeneTree:ENSGT00390000002030
HOGENOM:HOG000066013 KO:K11274 OMA:REYHFED OrthoDB:EOG4VMJPM
NextBio:981537 Genevestigator:Q01454 GermOnline:YPR135W
InterPro:IPR022100 Pfam:PF12341 Uniprot:Q01454
Length = 927
Score = 181 (68.8 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 82/329 (24%), Positives = 138/329 (41%)
Query: 249 GKYMATSSLDRQILIWD-VGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
G Y+A L+ ++ +W+ ++ R+ F +I +AWK ++ + V+G + +
Sbjct: 288 GTYIAAVDLNNKLTVWNWETSEIHYTRE-FKRKITNIAWKIQADSKTLDLVLGTWSGSIA 346
Query: 308 VVPSSMKSPTEDIP----SSRSNYNGLLLFDEEEKEP-------STSGSL-SDLGEDSHG 355
+V + +S +IP + S +GL + E + E + S L SD+ ++++
Sbjct: 347 IVQNLAESVVSNIPDQSVAESSTKHGLFVDSESDLENLEGNDDINKSDKLFSDITQEANA 406
Query: 356 ES------EMPSR-KRLRKQTXXXXXXXXXXXXXXXXXPKTESRKKAHSTHKEYS--DKG 406
E + PS RK S KK H+ H YS K
Sbjct: 407 EDVFTQTHDGPSGLSEKRKYNFEDEEDFIDDDDGAGYI----SGKKPHNEHS-YSRVHKT 461
Query: 407 NGSRSMRTSTRKNMQEAFQPGATPVQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTG 466
+ +T K F P TP RR+L N +G ++T+++ I + F D G
Sbjct: 462 HSFPISLANTGKFRYMPFSPAGTPFGFTDRRYLTMNEVGYVSTVKNSEQYSITVSFFDVG 521
Query: 467 RGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFE-G 525
R R D FG+ + LNE G++F G+ + YRP S +N + + G
Sbjct: 522 RF-REYHFEDLFGYDLCFLNEKGTLF-----GQSKTGQIQYRPHDSIHSNWTKIIPLQAG 575
Query: 526 EEVKAVALGTAWVAAVTSLNFLRIFTEGG 554
E + +VA V TSL + R F + G
Sbjct: 576 ERITSVAATPVRVIVGTSLGYFRSFNQFG 604
Score = 115 (45.5 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 732 LEAAQDRCILRLIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTKLKLPNLAERFNSI 791
L A D+ +LRL AS C+ + +A L L D+++ A+K+ + +LP+L ++ N+I
Sbjct: 858 LNGAYDKALLRLFASACSDQNVEKALSLAHELKQDRALTAAVKISERAELPSLVKKINNI 917
Query: 792 LEERLLSETK 801
E R + K
Sbjct: 918 REARYEQQLK 927
Score = 70 (29.7 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 47/218 (21%), Positives = 81/218 (37%)
Query: 99 ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE 158
+ RF LP+R SG M GDD + L+ D + + V+ ++++
Sbjct: 90 LARFALPLRDCCVIHSGKMAVFGGDDLELILLELDDETHKKHAIKIDEQVSQISYNSQMN 149
Query: 159 YLASIDSIGTVIYWELQSG--RELHNLKR-VAPDIGSDPSSMNVLS-WSPDGETLAVPGL 214
LA G V + L S ++H L + + D +LS D + L
Sbjct: 150 ILAVSMINGKVQIFSLTSTIPNKVHELNDYIVANSYDDTHRDKILSNMMDDIDKDNDNDL 209
Query: 215 KNDVVMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILIWDV-G----K 268
+ + A+ F IC ++W P G + A D + I+ + G K
Sbjct: 210 SETADPDENNVADPEFCA----ANRICTRVAWHPKGLHFALPCADDTVKIFSIKGYSLQK 265
Query: 269 KLDIDRQKFDDRICCMAWKPI-GNALAVIDVMGKYGVW 305
L + + + P+ G +A +D+ K VW
Sbjct: 266 TLSTNLSSTKAHFIDLQFDPLRGTYIAAVDLNNKLTVW 303
Score = 61 (26.5 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 629 WLPIFSASKD--KKS------DENYWIVGLNASKLFCIVCKNPDLFPQVMPKPVLTLLDL 680
WLPI ++ + K S D + W + L L CI+ K ++P+ P P+ + +++
Sbjct: 718 WLPILDSNMEIWKMSGGKETTDIHVWPLALAYDTLNCILVKGKHIWPE-FPLPLPSEMEI 776
Query: 681 SFPLASSDLGAETLENEFMMN 701
P+ E EN+ ++N
Sbjct: 777 RMPVFVKSKLLE--ENKAILN 795
Score = 37 (18.1 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 21/94 (22%), Positives = 37/94 (39%)
Query: 65 TALALSPNSTCLASGSIDHSVKLYKFPGGEFQ----TNITRFTLPIRVLAFNK-SGSMLA 119
T +A P A D +VK++ G Q TN++ L F+ G+ +A
Sbjct: 233 TRVAWHPKGLHFALPCADDTVKIFSIKGYSLQKTLSTNLSSTKAHFIDLQFDPLRGTYIA 292
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAF 153
A + + + N I + K +T +A+
Sbjct: 293 AVDLNNKLTVWNWETSEI-HYTREFKRKITNIAW 325
>WB|WBGene00008921 [details] [associations]
symbol:F17C11.10 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR001680 InterPro:IPR015943 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045132
GeneTree:ENSGT00390000002030 KO:K11274 EMBL:Z72507 PIR:T21062
RefSeq:NP_505799.1 ProteinModelPortal:Q19520 SMR:Q19520
STRING:Q19520 PaxDb:Q19520 EnsemblMetazoa:F17C11.10 GeneID:179521
KEGG:cel:CELE_F17C11.10 UCSC:F17C11.10 CTD:179521
WormBase:F17C11.10 eggNOG:NOG235494 HOGENOM:HOG000022577
InParanoid:Q19520 OMA:KEFRYIY NextBio:905764 Uniprot:Q19520
Length = 1101
Score = 170 (64.9 bits), Expect = 5.1e-17, Sum P(3) = 5.1e-17
Identities = 95/386 (24%), Positives = 162/386 (41%)
Query: 102 FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLA 161
F + + + N+ + D +K N D + + V + DP +E++A
Sbjct: 109 FQMDVTTVDANREN--VIGGSSDYAVKCTNMKDLDAELKTRSLEAEVLCVKLDPKNEFVA 166
Query: 162 SIDSIGTVIYWELQSGRELHNLKRVAPDIGS-DPSSMNV-LSWSPDGETLAVPGLKNDVV 219
G V ++ S H L +V P + D S + LSWS DG+ L VP K V
Sbjct: 167 VSTVDGNVTIIDIDSFSIKHTLTKVFPRFETIDVSRPRIQLSWSKDGQWLFVPS-KGCVK 225
Query: 220 MYDRDTAEK--LFSLRGDHVQ-PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-Q 275
Y R+ E+ ++ L+ DH + SP GKY+A+S++D QI +W+ +LDI +
Sbjct: 226 SYRRNGWEESGVYRLK-DHASVDFSVTALSPCGKYLASSTMDNQIAVWN-SDELDIVCCE 283
Query: 276 KFDDR------ICCMAWKPIG-NALAVIDV---MGKYGVW--ESVVPSSMKSPTEDIPSS 323
KF I + + P L V D + + V+ +S + + TED+
Sbjct: 284 KFVRNAPGITIITSIVFSPFSPKKLIVADSNRGICLFNVFKDDSSNEKPVSNKTEDVAVD 343
Query: 324 RSNYNGLLLFDEEEKEPSTSGSLS-DLGEDSHGESEMPSRKRLRKQTXXXXXXXXXXXXX 382
+ + +LL K+ S + + ED+ S++ + KR Q
Sbjct: 344 SDDDDSILLNRTSLKKDSLFNEEAIEEDEDTRMSSDLGAIKR---QFNYGNQDLGGLEEF 400
Query: 383 XXXXPKTESRKKAHSTHKEYSDKGNGSRSMRTSTRKNM-QEAFQPGATPVQ-PGKRRFLC 440
+ E + S+ + +D S + RK + E F ++P+ +RFL
Sbjct: 401 GFKLGEPEEMRPM-SSDRNLNDPLPQVYSDPPAPRKVLIPERFVSNSSPMDLDATQRFLK 459
Query: 441 YNMLGTITTM--EHDGYSHIEIDFHD 464
YN G I + E + S I+I+FH+
Sbjct: 460 YNRFGIIRSYVNEANKVSTIDIEFHN 485
Score = 156 (60.0 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 62/259 (23%), Positives = 109/259 (42%)
Query: 27 QQAHHLVTASSSETTISIH-DPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
+ ++ + + I+ + LL P+I+ +++A + C +D V
Sbjct: 24 EDTENIYVCDAERNVLKINKNVLLQDEKPEIIEIPDATTSSIAWYGENICFGYRKVDFIV 83
Query: 86 -----KLYKFPGGEFQTN--ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA 138
+ + G F+ I + V + + + D +K N D
Sbjct: 84 GSEQQMVGRAKKGNFEAGDIIDPLEFQMDVTTVDANRENVIGGSSDYAVKCTNMKDLDAE 143
Query: 139 RVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS-DPSSM 197
+ + V + DP +E++A G V ++ S H L +V P + D S
Sbjct: 144 LKTRSLEAEVLCVKLDPKNEFVAVSTVDGNVTIIDIDSFSIKHTLTKVFPRFETIDVSRP 203
Query: 198 NV-LSWSPDGETLAVPGLKNDVVMYDRDTAEK--LFSLRGDHVQ-PICFLSWSPNGKYMA 253
+ LSWS DG+ L VP K V Y R+ E+ ++ L+ DH + SP GKY+A
Sbjct: 204 RIQLSWSKDGQWLFVPS-KGCVKSYRRNGWEESGVYRLK-DHASVDFSVTALSPCGKYLA 261
Query: 254 TSSLDRQILIWDVGKKLDI 272
+S++D QI +W+ +LDI
Sbjct: 262 SSTMDNQIAVWN-SDELDI 279
Score = 109 (43.4 bits), Expect = 5.1e-17, Sum P(3) = 5.1e-17
Identities = 78/368 (21%), Positives = 145/368 (39%)
Query: 590 LPLTPGSQLTWFGFSEEGQLSSYDSKGILRVYTNLYGGSWLPIFSASKDKKSDEN-YWIV 648
+P+ G QL W +S +G+L+ DS + V + G W+PIF S ++ + + +
Sbjct: 673 VPIETGEQLDWIAYSNQGKLAVMDSAYTVHVLSA--PGLWIPIFQGSSALRAPSDAIFPI 730
Query: 649 GLNASKLFCIVCKNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLENEFMMNNFHLSQI 708
GL + I C+ P V T ++ P + +E+E + L+
Sbjct: 731 GLTVKEFRYIYCRG-SRSPLVNGINAPTTVEFKVPFCQPESHRTEMEHEMFLKELSLADA 789
Query: 709 PKRMEEVTDAGLDTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLVRATELVKLLS---- 764
+E D+ ++ EA L + I++L A + +A E+ L+S
Sbjct: 790 I--LERNGDSHVE------EAKTLT----KTIVKLFAWLTKTNSDGQAAEVAALVSGGTS 837
Query: 765 -LDKSMQGAIKLVTKLKLPNLAERFNSI---LEE----RLLSETK--------------- 801
K++Q +K K LAE+ I L E R ++T+
Sbjct: 838 ASAKAIQSLCNYASKCKKVALAEKVAEIGRRLTEDDDDRSCNDTEIWPTKRIALAARKAQ 897
Query: 802 ETPNTTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPSVKFSL-PIFKKKVKSPEEI 860
+ P+ T+ N + T GD S+ + + + S M +P+ P + + P K S +
Sbjct: 898 KAPSPTVESLNEDQTNDGDESSSRYNLNMDVSMMSQPVQPLERLAKNPFAKGSDTSKIDS 957
Query: 861 KLGNEPTIQ--NQKAKVDNNREVKGIEDNNAGAVTKVEKTKIQSQHPPNVFFKSSNNQEN 918
++ ++ +Q N++ + E VT +T ++ Q N F + + E
Sbjct: 958 AASSQASLSIFDQLESTSNDQRKRAREPET---VTSTNQT-VRKQAKLN-FGGTQQSDEK 1012
Query: 919 TNKAGEVN 926
K N
Sbjct: 1013 KKKTSSKN 1020
Score = 72 (30.4 bits), Expect = 5.1e-17, Sum P(3) = 5.1e-17
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 495 PCKGEKNMSTLMYR-PFSSWANNSEWSMRF-EGEEVKAVALGTAWVAAVTSLNFLRIFTE 552
P K EK ++L++ P ++ ++ WSM G+ V V +T +R+FT
Sbjct: 540 PAKTEKKGTSLLHVIPIQAF-DSQRWSMVLPRGDGCIDVLCSNTQVVVLTKKRNIRVFTI 598
Query: 553 GGFQDQLAVVTH 564
GG Q Q + TH
Sbjct: 599 GGIQRQ--IFTH 608
Score = 56 (24.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 310 PSSMKSPTEDI-PSSRSNYNGLLLFDEEEKEPSTSGS-LSDLGEDSHGESEMPSRKRLRK 367
P ++ S + + ++ N+ G DE++K+ S+ S L G+++ E+ P + +K
Sbjct: 985 PETVTSTNQTVRKQAKLNFGGTQQSDEKKKKTSSKNSDLGQKGKENEAETLCPIEEPAKK 1044
Score = 42 (19.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 310 PSSMKSPTEDIPSSRSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMPSRKRLRKQ 368
P + S T I S+ S+ L +FD+ E STS + E+ + + +RKQ
Sbjct: 945 PFAKGSDTSKIDSAASSQASLSIFDQLE---STSNDQRKRAREP--ETVTSTNQTVRKQ 998
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 227 (85.0 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 70/252 (27%), Positives = 122/252 (48%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ A+ S+ + + L+ ++S + T+ I D S L L H D V ++ S +S
Sbjct: 294 GHEAAVLSVSYSHDSR-LLASASDDRTVKIWDTETGS-LQHTLEGHSDLVRSVIFSHDSR 351
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
LAS S D +VK++ G Q + +R + F+ +LA+A DD +K+ +T
Sbjct: 352 LLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
GS+ L+GH+ V + F +S+ LAS TV W+ +G H L+ G
Sbjct: 411 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE------GHRD 464
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
+V+ +S D LA V ++D + +L G H + +S+S + + +A+
Sbjct: 465 WVRSVI-FSHDSRLLASASDDRTVRIWDTEKGSHKHTLEG-HSSLVTSVSFSHDSRLLAS 522
Query: 255 SSLDRQILIWDV 266
+S D+ + IWD+
Sbjct: 523 ASNDQTVRIWDI 534
Score = 197 (74.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 62/214 (28%), Positives = 104/214 (48%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H V +++ S +S LAS S D +VK++ G Q + + +R + F+
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSR 351
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+A D +K+ +T GS+ L+GH+ V + F +S+ LAS TV W+ +
Sbjct: 352 LLASASDST-VKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG-- 234
G H L+ G +V+ +S D + LA + V ++D T +L G
Sbjct: 411 GSLQHTLE------GHRDWVRSVI-FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR 463
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
D V+ + F S + + +A++S DR + IWD K
Sbjct: 464 DWVRSVIF---SHDSRLLASASDDRTVRIWDTEK 494
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/161 (30%), Positives = 85/161 (52%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+++ + L+ ++S ++T+ I D S L L HRD V ++ S +S LAS S
Sbjct: 384 SVIFSHDSQ-LLASASDDSTVKIWDTGTGS-LQHTLEGHRDWVRSVIFSHDSQLLASASD 441
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D +VK++ G Q + +R + F+ +LA+A DD +++ +T GS L
Sbjct: 442 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL 501
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN 182
+GH VT ++F +S LAS + TV W++++ R L +
Sbjct: 502 EGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEA-RSLQH 541
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 226 (84.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 63/212 (29%), Positives = 106/212 (50%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSG 115
+LR H GV+A+ SP+++ +ASG D +VK++ G+ I ++++ G
Sbjct: 171 LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDG 230
Query: 116 SMLAAAGDDEGIKLINTIDGSIARV-LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+ +A+ DD+ I+L N + G GH V +AF P L S V W++
Sbjct: 231 ATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 175 QSGRELHNLKRVAPDIGSDP-SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
+S R + +L P SDP S ++V+ W DG +A V ++D T + L +L
Sbjct: 291 RSARVMKSL----P-AHSDPVSGIDVV-W--DGTLIASCATDGLVRIWDTSTGQCLRTLV 342
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+ P+ + +SPNGKY+ +LD + +WD
Sbjct: 343 HEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWD 374
Score = 178 (67.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 65/268 (24%), Positives = 111/268 (41%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYK-FPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H G++ ++ SP+ +ASGS D +++L+ G T + +AF+ G+ML
Sbjct: 217 HLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNML 276
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
+ DE + L + + + L H PV+G+ + +AS + G V W+ +G+
Sbjct: 277 VSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQ 336
Query: 179 ELHNLKRVA-PDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234
L L P + S P+ VL+W+ D ++ + + + K +SL G
Sbjct: 337 CLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSG 396
Query: 235 DH-VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRIC-----CMAWKP 288
V +P + + S D IL WDV K + R + D + C +
Sbjct: 397 AFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGE- 455
Query: 289 IGNALAVIDVMGKYGVWESVVPSSMKSP 316
G + + G VWE V P P
Sbjct: 456 -GRFMVSCGLDGTVRVWEEVGPEREPEP 482
Score = 159 (61.0 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 61/261 (23%), Positives = 108/261 (41%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ A +I W + + S + TI + + L P H + V A+A SP
Sbjct: 216 GHLAGISTISWSPDGA-TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN 274
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L SGS D +V L+ ++ + P+ + G+++A+ D +++ +T
Sbjct: 275 MLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTST 334
Query: 135 GSIARVLKGHKGP-VTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G R L P V+ + F PN +Y+ + V W+ GR L + + S
Sbjct: 335 GQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSL 394
Query: 194 PSSMNVLSWSPDGET----LAVPGLKNDVVM-YDRDTAEKLFSLRG-DHVQPICFLSWSP 247
+ V S G T AV G ++ ++ +D T + L + D V +
Sbjct: 395 SGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTG 454
Query: 248 NGKYMATSSLDRQILIWD-VG 267
G++M + LD + +W+ VG
Sbjct: 455 EGRFMVSCGLDGTVRVWEEVG 475
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 217 (81.4 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 65/244 (26%), Positives = 123/244 (50%)
Query: 27 QQAHHLVTASSSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNSTCLASGSIDHSV 85
++A L++A E +P P+ ++ L H ++++ SPN LAS + D +
Sbjct: 9 ERAQSLLSAPRRE-----EEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALI 63
Query: 86 KLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145
++ G + + +L I +A++ S L +A DD+ +K+ + G + LKGH
Sbjct: 64 IIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHS 123
Query: 146 GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205
V F+P S + S +V WE+++G+ L L SDP S ++++ +
Sbjct: 124 DFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSA-----HSDPIS--AVNFNCN 176
Query: 206 GETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
G +L V G + + ++D + + L +L + P+ F+ +SPNGKY+ T++LD + +W
Sbjct: 177 G-SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW 235
Query: 265 DVGK 268
D +
Sbjct: 236 DYSR 239
Score = 207 (77.9 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 73/298 (24%), Positives = 129/298 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G++A+ S+ + L ASS+ + I N K L H ++ +A S +S+
Sbjct: 37 GHSAAISSVKFSPNGEWL--ASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
L S S D ++K++ G+ + + + FN +++ + DE +K+
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H P++ + F+ N + S G W+ SG+ L L D G+ P
Sbjct: 155 GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA----DEGNPP 210
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWSPNG-KYM 252
S + +SP+G+ + L N + ++D L + G + C F S+S G K++
Sbjct: 211 VSF--VKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWV 268
Query: 253 ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGN--ALAVIDVMGKYGVWES 307
+ S D + IW++ K + R Q D + A P N A A ++ VW S
Sbjct: 269 VSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSS 326
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 220 (82.5 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 56/212 (26%), Positives = 101/212 (47%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H +++ SP L + S D +VK++ + +T L + +A++
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+ +A DD+ +K+ + + + LKGH V F+P S + S +V W++++
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + L P SDP S +S++ DG +A V ++D + + +L D
Sbjct: 203 GMCIKTL----P-AHSDPVS--AVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ F+ +SPNGKY+ S+LD + +WD K
Sbjct: 256 NPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 65/300 (21%), Positives = 133/300 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S S + +L T SS++ T+ I + + + L H+ GV +A S +S
Sbjct: 85 GHTKSISSAKFSPCGKYLGT-SSADKTVKIWN-MDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
C+ S S D ++K+++ + + FN S++ + DE +++ +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ ++F+ + +AS G V W+ +G+ +K + D +P
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ---CIKTLVDD--ENP 257
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
+ + +SP+G+ + L + + ++D + L G C F ++S GK++
Sbjct: 258 P-VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 253 ATSSLDRQILIWDVGKKLDID-RQKFDDRICCMAWKPIGNALA--VIDVMGKYGVWESVV 309
+ S D +I IW++ + + + + P+ N +A ++ K +W S V
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRSDV 376
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 220 (82.5 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 56/212 (26%), Positives = 101/212 (47%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H +++ SP L + S D +VK++ + +T L + +A++
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+ +A DD+ +K+ + + + LKGH V F+P S + S +V W++++
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + L P SDP S +S++ DG +A V ++D + + +L D
Sbjct: 203 GMCIKTL----P-AHSDPVS--AVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ F+ +SPNGKY+ S+LD + +WD K
Sbjct: 256 NPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 65/300 (21%), Positives = 133/300 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S S + +L T SS++ T+ I + + + L H+ GV +A S +S
Sbjct: 85 GHTKSISSAKFSPCGKYLGT-SSADKTVKIWN-MDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
C+ S S D ++K+++ + + FN S++ + DE +++ +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ ++F+ + +AS G V W+ +G+ +K + D +P
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ---CIKTLVDD--ENP 257
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
+ + +SP+G+ + L + + ++D + L G C F ++S GK++
Sbjct: 258 P-VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 253 ATSSLDRQILIWDVGKKLDID-RQKFDDRICCMAWKPIGNALA--VIDVMGKYGVWESVV 309
+ S D +I IW++ + + + + P+ N +A ++ K +W S V
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRSDV 376
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 227 (85.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 72/285 (25%), Positives = 133/285 (46%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+++ + L+ ++S + T+ I D L ++L+ H D V ++ S +S +ASGS
Sbjct: 310 SVVFSHDSR-LLASASDDGTVKIWDTAT-GTLQRMLKGHNDSVRSVVFSHDSRLIASGSN 367
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D +V++++ G + + ++F LA+A D +K+ +T GS+ VL
Sbjct: 368 DRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVL 427
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
+GH V ++F P+S LAS TV W +G +L+R G + +V+
Sbjct: 428 EGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG----SLQRTLE--GHNDWVRSVV- 480
Query: 202 WSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQI 261
+S D +A V ++D T +L H + + +S + + +A++S D +
Sbjct: 481 FSHDSRLIASASDDMTVKIWDTATVPLQNNLES-HDNWVRSVVFSHDSRLLASASDDMTV 539
Query: 262 LIWDVGK-KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVW 305
IWD L+ + DDR+ +++ P LA G +W
Sbjct: 540 KIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 205 (77.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 62/206 (30%), Positives = 99/206 (48%)
Query: 10 EAHK-CGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALA 68
E H C N+ SF D + L+ ++S + T+ I S L + L H D V ++
Sbjct: 428 EGHDDCVNSVSFSP---DSR---LLASASDDRTVKIWHAATGS-LQRTLEGHNDWVRSVV 480
Query: 69 LSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128
S +S +AS S D +VK++ Q N+ +R + F+ +LA+A DD +K
Sbjct: 481 FSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVK 540
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK---R 185
+ +T GS+ L+GH V ++F P+S LAS GTV W +G H R
Sbjct: 541 IWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGR 600
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAV 211
VA + +S N+L+ + D T+ +
Sbjct: 601 VAISLAFSHTS-NLLASAMDDGTVKI 625
Score = 202 (76.2 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 58/211 (27%), Positives = 101/211 (47%)
Query: 54 PKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNK 113
P + H V +++ S +S LAS S D +VK++ Q + ++ + F+
Sbjct: 256 PAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSH 315
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+LA+A DD +K+ +T G++ R+LKGH V + F +S +AS + TV WE
Sbjct: 316 DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWE 375
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
+G H + S+ +S++ D LA +V ++D T L
Sbjct: 376 TTTGLLRHTFE-------DHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE 428
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
G H + +S+SP+ + +A++S DR + IW
Sbjct: 429 G-HDDCVNSVSFSPDSRLLASASDDRTVKIW 458
Score = 200 (75.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 63/236 (26%), Positives = 110/236 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ I D S L L H + V ++ S +S LAS S D +VK++
Sbjct: 277 LLASASGDGTVKIWDTAT-SFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTA 335
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G Q + +R + F+ ++A+ +D +++ T G + + H+ V +
Sbjct: 336 TGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAV 395
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
+F +S LAS G V W+ ++G L N+ G D +N +S+SPD LA
Sbjct: 396 SFAHDSRRLASASDGGNVKIWDTRTG-SLQNVLE-----GHD-DCVNSVSFSPDSRLLAS 448
Query: 212 PGLKNDVVMYDRDTAEKLFSLRG--DHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
V ++ T +L G D V+ + F S + + +A++S D + IWD
Sbjct: 449 ASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVF---SHDSRLIASASDDMTVKIWD 501
Score = 190 (71.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 66/248 (26%), Positives = 109/248 (43%)
Query: 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLAS 78
S ++ + + L +AS + I D S L +L H D V +++ SP+S LAS
Sbjct: 391 SVMAVSFAHDSRRLASASDGGN-VKIWDTRTGS-LQNVLEGHDDCVNSVSFSPDSRLLAS 448
Query: 79 GSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA 138
S D +VK++ G Q + +R + F+ ++A+A DD +K+ +T +
Sbjct: 449 ASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQ 508
Query: 139 RVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMN 198
L+ H V + F +S LAS TV W+ +G L N G D +N
Sbjct: 509 NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG-SLENTLE-----GHD-DRVN 561
Query: 199 VLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258
+S+SPD LA V ++ T + G I L++S +A++ D
Sbjct: 562 SVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAIS-LAFSHTSNLLASAMDD 620
Query: 259 RQILIWDV 266
+ IWD+
Sbjct: 621 GTVKIWDM 628
Score = 159 (61.0 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPL-LPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+++ + L+ ++S + T+ I D +P L L H + V ++ S +S LAS S
Sbjct: 478 SVVFSHDSR-LIASASDDMTVKIWDTATVP--LQNNLESHDNWVRSVVFSHDSRLLASAS 534
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D +VK++ G + + + ++F+ +LA+A DD +K+ G++
Sbjct: 535 DDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHT 594
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ--SGREL----HNLKRVAPDIGSDP 194
G LAF S LAS GTV W+++ S R H ++R+ D
Sbjct: 595 FDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHEIQRIQFDKSMSS 654
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
NV D + A G + V+ DR A+
Sbjct: 655 LITNVGRIQLDARSKATEGFASSQVL-DRSQAQ 686
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 215 (80.7 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 78/311 (25%), Positives = 135/311 (43%)
Query: 1 MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLP-----SN--- 52
+K +S+ L + + ++ + Q+A L+TAS S+ + L SN
Sbjct: 25 LKTKSIDLLDLDPSTDVSALVEEI--QKAEPLITASRSDQVKLLIQRLQNKLGQHSNHKF 82
Query: 53 -LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF 111
L K+LR H +T +AL+ + +C +GS D + KL+ GE + + +AF
Sbjct: 83 YLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAF 142
Query: 112 NKS-GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
N G +A D+ KL + G +GH + L+F+P S +A+ T
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W++QSG E+ L + +I S LS++ G + + V +++ DT K++
Sbjct: 203 LWDIQSGEEVFTLTGHSAEIIS-------LSFNTSGNRIITGSFDHTVTVWEADTGRKVY 255
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD-VGKKLDIDRQKFDDRICCMAWKPI 289
+L G H I ++ + + T S+D+ +WD V K DD I +
Sbjct: 256 TLIG-HCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYT 314
Query: 290 GNALAVIDVMG 300
G +A G
Sbjct: 315 GKLIATASADG 325
Score = 177 (67.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 66/280 (23%), Positives = 117/280 (41%)
Query: 57 LRHHRDGVTALALS-PNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSG 115
L HR+ V A+A + P +A+GS D + KL+ G+ T I L+FN
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 116 SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
+++A D KL + G L GH + L+F+ + + + TV WE
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG- 234
+GR+++ L +I S V +W D + + ++D + + +L G
Sbjct: 250 TGRKVYTLIGHCAEISSA-----VFNW--DCSLILTGSMDKTCKLWDAVNGKCVATLTGH 302
Query: 235 -DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNA 292
D + CF GK +AT+S D I+ + + + + + I +++ P GN
Sbjct: 303 DDEILDSCF---DYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR 359
Query: 293 LAVIDVMGKYGVWESVVPSSMK---SPTEDIPSSRSNYNG 329
L +W++ ++ T++I S NY G
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKG 399
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/250 (20%), Positives = 102/250 (40%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ A + ++ Q+ LV S +TT + D + + H + + +L+ + +
Sbjct: 175 GHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQSGEEVFTLTGHSAE-IISLSFNTSGN 232
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ +GS DH+V +++ G + I FN S++ D+ KL + ++
Sbjct: 233 RIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN 292
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G L GH + FD + +A+ + GT + + + L+ G +
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLE------GHE- 345
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
++ +S++P G L ++D T + L L G H I +++ G + T
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEG-HTDEIFSCAFNYKGDIIIT 404
Query: 255 SSLDRQILIW 264
S D IW
Sbjct: 405 GSKDNTCRIW 414
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 219 (82.2 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 78/311 (25%), Positives = 137/311 (44%)
Query: 1 MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPL---LPSN----- 52
+K +S+ L + + ++ + Q+A L+TAS +E + L L N
Sbjct: 25 LKTKSIDLLDLGPSTDVSALVEEI--QKAEPLLTASRTEQVKLLIQRLQEKLGQNSNHTF 82
Query: 53 -LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF 111
L K+L+ H +T +AL+ + +C +GS D + KL+ GE + + +AF
Sbjct: 83 YLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAF 142
Query: 112 NKS-GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
N G +A D+ KL + G +GH + L+F+P S +A+ T
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W++Q+G E++ L+ + +I S LS++ G+ + + VV++D DT K+
Sbjct: 203 LWDIQNGEEVYTLRGHSAEIIS-------LSFNTSGDRIITGSFDHTVVVWDADTGRKVN 255
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKPI 289
L G H I S++ + + T S+D+ +WD K DD I +
Sbjct: 256 ILIG-HCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYT 314
Query: 290 GNALAVIDVMG 300
G +A G
Sbjct: 315 GKLIATASADG 325
Score = 185 (70.2 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 71/300 (23%), Positives = 128/300 (42%)
Query: 37 SSETTISIHDPLLPSNLPKILRHHRDGVTALALS-PNSTCLASGSIDHSVKLYKFPGGEF 95
S + T + D L L HR+ V A+A + P +A+GS D + KL+ G+
Sbjct: 111 SYDRTCKLWDTASGEEL-NTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC 169
Query: 96 QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP 155
T I L+FN +++A D KL + +G L+GH + L+F+
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNT 229
Query: 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215
+ + + + TV+ W+ +GR+++ L +I S +S N W D + +
Sbjct: 230 SGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISS--ASFN---W--DCSLILTGSMD 282
Query: 216 NDVVMYDRDTAEKLFSLRG--DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDID 273
++D + + +L G D + CF GK +AT+S D I+ + I
Sbjct: 283 KTCKLWDATNGKCVATLTGHDDEILDSCF---DYTGKLIATASADGTARIFSAATRKCIA 339
Query: 274 R-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMK---SPTEDIPSSRSNYNG 329
+ + + I +++ P GN L +W++ ++ T++I S NY G
Sbjct: 340 KLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKG 399
Score = 147 (56.8 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 54/250 (21%), Positives = 102/250 (40%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ A + ++ Q+ LV S +TT + D + LR H + +L+ + +
Sbjct: 175 GHTAEIVCLSFNPQST-LVATGSMDTTAKLWD-IQNGEEVYTLRGHSAEIISLSFNTSGD 232
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ +GS DH+V ++ G + I +FN S++ D+ KL + +
Sbjct: 233 RIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN 292
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G L GH + FD + +A+ + GT + + + + L+ G +
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE------GHE- 345
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
++ +S++P G L ++D T + L L G H I +++ G + T
Sbjct: 346 GEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEG-HTDEIFSCAFNYKGNIVIT 404
Query: 255 SSLDRQILIW 264
S D IW
Sbjct: 405 GSKDNTCRIW 414
Score = 37 (18.1 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 704 HLSQIPKRMEEVTDAGLDTSSLDDEAFNLEAAQDRCILRL 743
H +I + T + T+S D A AA +CI +L
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKL 341
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 208 (78.3 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 63/255 (24%), Positives = 118/255 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+++ + W +H+ +AS + T+ I D P K+LR H + V + +P S
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASD-DCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D ++++++ G+ I ++PI + FN+ GS++ +A D K+ + +
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 135 GSIARVLKGHKGPVTGLA-FDPNSEYL--ASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
G+ + L K P A F PN +++ A++DS T+ +G+ L +
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDS--TLKLSNYATGKFLKVYTGHTNKVF 259
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
S+ +V + G+ + N V ++D L L G H + +S P
Sbjct: 260 CITSAFSVTN----GKYIVSGSEDNCVYLWDLQARNILQRLEG-HTDAVISVSCHPVQNE 314
Query: 252 MATSS--LDRQILIW 264
+++S LD+ I IW
Sbjct: 315 ISSSGNHLDKTIRIW 329
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 67/297 (22%), Positives = 131/297 (44%)
Query: 4 RSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH--HR 61
R +K E H AA C + + + L +AS +T I +N I R+ H
Sbjct: 34 RHLKTLEGH---TAAISC-VKFSNDGNLLASASVDKTMILWS----ATNYSLIHRYEGHS 85
Query: 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSMLAA 120
G++ LA S +S S S D +++++ + R T + + FN +++ +
Sbjct: 86 SGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVS 145
Query: 121 AGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGREL 180
DE I++ G R++K H P++ + F+ + + S G+ W+ + G L
Sbjct: 146 GSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCL 205
Query: 181 HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240
L I +++ +SP+G+ + V L + + + + T + L G +
Sbjct: 206 KTL------IDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVF 259
Query: 241 CFLS-WS-PNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
C S +S NGKY+ + S D + +WD+ + + R + D + ++ P+ N ++
Sbjct: 260 CITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEIS 316
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 208 (78.3 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 51/153 (33%), Positives = 77/153 (50%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ + S+E TI + D L L H + V L SP+ LASGS D ++KL+ P
Sbjct: 169 LLASGSAEKTIKLWDSAT-CGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPP 227
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G + + + I LAF+ +G +LA+ D IKL +T GS LKGH V +
Sbjct: 228 SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSV 287
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
F P+S+ L S T+ W+ +G H+++
Sbjct: 288 VFSPDSQLLESGSGDNTIKLWDPATGILKHSMR 320
Score = 200 (75.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/188 (29%), Positives = 91/188 (48%)
Query: 46 DPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP 105
+P + S L + H D V ++A SP+ LASGS + ++KL+ + + +
Sbjct: 141 NPAIGS-LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNW 199
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165
+ L F+ G +LA+ +D IKL + GS+ L+GH + LAF PN + LAS S
Sbjct: 200 VLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSS 259
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225
T+ W+ +G H LK G ++V+ +SPD + L N + ++D T
Sbjct: 260 DATIKLWDTATGSFRHTLK------GHSDMVLSVV-FSPDSQLLESGSGDNTIKLWDPAT 312
Query: 226 AEKLFSLR 233
S+R
Sbjct: 313 GILKHSMR 320
Score = 157 (60.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 109 LAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168
+AF+ G +LA+ ++ IKL ++ + L GH V L F P+ LAS + T
Sbjct: 161 VAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDAT 220
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228
+ W+ SG H L+ + I S L++SP+G+ LA + ++D T
Sbjct: 221 IKLWDPPSGSLKHTLEGHSNKIES-------LAFSPNGQLLASGSSDATIKLWDTATGSF 273
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+L+G H + + +SP+ + + + S D I +WD
Sbjct: 274 RHTLKG-HSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H D + + SP+ LASGS D ++KL+ G + + + ++ +AF+ +G
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQ 96
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE 158
+LA+ D IKL N+ S+ ++GH V +AF PN +
Sbjct: 97 LLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ 138
Score = 149 (57.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 41/142 (28%), Positives = 69/142 (48%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ + S++TTI + DP L + L H V ++A SPN LASGS D ++KL+
Sbjct: 55 LLASGSNDTTIKLWDPA-SGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSA 113
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + + +AF+ +G +L N GS+ ++GH V +
Sbjct: 114 SDSLKHTMEGHSDRVESVAFSPNG------------QLWNPAIGSLKHTIEGHSDWVLSV 161
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF P+ + LAS + T+ W+
Sbjct: 162 AFSPDGQLLASGSAEKTIKLWD 183
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 128 KLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVA 187
+L N GS+ ++GH V +AF P+ + LAS + T+ W+ + H L
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL---- 193
Query: 188 PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP 247
G + + L +SPDG LA + ++D + +L G H I L++SP
Sbjct: 194 ---GGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEG-HSNKIESLAFSP 249
Query: 248 NGKYMATSSLDRQILIWD 265
NG+ +A+ S D I +WD
Sbjct: 250 NGQLLASGSSDATIKLWD 267
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E QT + + I + F+ G +LA+ +D IKL + G + + L+GH V +
Sbjct: 31 GPELQT-LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSV 89
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204
AF PN + LAS S T+ W S H ++ + + S S N W+P
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNP 142
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 204 (76.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 65/255 (25%), Positives = 109/255 (42%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
K+LR H +T +AL+ +C +GS D + K++ GE + + +AFN
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 115 -GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
G +A D+ KL + G +GH + L+F+P S +A+ T W+
Sbjct: 146 YGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
+QSG E+ L +I S LS+ G+ + + VV++D T K+ +L
Sbjct: 206 IQSGEEVVTLTGHLAEIIS-------LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLI 258
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKPIGNA 292
G H I +S + + T S+D+ ++WD K DD I + G
Sbjct: 259 G-HCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKL 317
Query: 293 LAVIDVMGKYGVWES 307
+A G V+ +
Sbjct: 318 IATASADGTARVYNA 332
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 71/300 (23%), Positives = 127/300 (42%)
Query: 37 SSETTISIHDPLLPSNLPKILRHHRDGVTALALS-PNSTCLASGSIDHSVKLYKFPGGEF 95
S + T + D L L HR+ V A+A + P +A+GS D + KL+ G+
Sbjct: 111 SYDRTCKVWDTASGEEL-HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKC 169
Query: 96 QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP 155
T I L+FN +++A D KL + G L GH + L+FD
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDT 229
Query: 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215
+ + + + TV+ W+ +GR++H L +I S + SW D + +
Sbjct: 230 SGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSA-----LFSW--DCSLILTGSMD 282
Query: 216 NDVVMYDRDTAEKLFSLRG--DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDID 273
+++D + + + +L G D + CF GK +AT+S D +++ + I
Sbjct: 283 KTCMLWDATSGKCVATLTGHDDEILDSCF---DYTGKLIATASADGTARVYNATTRKCIT 339
Query: 274 R-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMK---SPTEDIPSSRSNYNG 329
+ + + I +++ P GN L +W+ ++ T++I S NY G
Sbjct: 340 KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKG 399
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 49/250 (19%), Positives = 98/250 (39%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ A + ++ Q+ +V S +TT + D + + H + + +L+ +
Sbjct: 175 GHTAEIVCLSFNPQST-VVATGSMDTTAKLWDIQSGEEVVTLTGHLAE-IISLSFDTSGD 232
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ +GS DH+V ++ G + I F+ S++ D+ L +
Sbjct: 233 RIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS 292
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G L GH + FD + +A+ + GT + + + + L+ G +
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLE------GHE- 345
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
++ +S++P G L ++D T + L L G H I +++ G + T
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEG-HTDEIFSCAFNYKGNIVIT 404
Query: 255 SSLDRQILIW 264
S D IW
Sbjct: 405 GSKDNSCRIW 414
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 205 (77.2 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 63/255 (24%), Positives = 111/255 (43%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRV 108
L L L H+ + +L + L +GS+D + ++ E++ + P
Sbjct: 353 LNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLD 412
Query: 109 LAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168
+ + + S A + D I L + A+ GH+G V + +DP LAS T
Sbjct: 413 VDWRNNVSF-ATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDST 471
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE---------TLAVPGLKNDVV 219
W ++ +H+L+ +I + + WSP G TLA + V
Sbjct: 472 AKIWNIKQSTFVHDLREHTKEIYT-------IRWSPTGPGTNNPNKQLTLASASFDSTVK 524
Query: 220 MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
++D + + L S G H +P+ L++SPNG+Y+A+ SLD+ I IW + + + +
Sbjct: 525 LWDAELGKMLCSFNG-HREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNG 583
Query: 280 RICCMAWKPIGNALA 294
I + W GN +A
Sbjct: 584 GIFEVCWNKEGNKIA 598
Score = 163 (62.4 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 59/259 (22%), Positives = 108/259 (41%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRV 108
+P++ +IL H V A A SP+++ LASGS D + +++ P G F+ T + +
Sbjct: 253 IPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALI 312
Query: 109 LAFNKSGS----------------MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152
L K S L A G +G I T++G + L HKGP+ L
Sbjct: 313 LKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLK 372
Query: 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212
++ +YL + T + W++++ + S P+ ++V W + + A
Sbjct: 373 WNKKGDYLLTGSVDRTAVVWDVKAEEWKQQF-----EFHSGPT-LDV-DWR-NNVSFATS 424
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI 272
+ + + + G + C + W P G +A+ S D IW++ + +
Sbjct: 425 STDSMIYLCKIGETRPAKTFTGHQGEVNC-VKWDPTGSLLASCSDDSTAKIWNIKQSTFV 483
Query: 273 -DRQKFDDRICCMAWKPIG 290
D ++ I + W P G
Sbjct: 484 HDLREHTKEIYTIRWSPTG 502
Score = 132 (51.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 50/200 (25%), Positives = 84/200 (42%)
Query: 33 VTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
V+ ++S T I+ + P K H+ V + P + LAS S D + K++
Sbjct: 419 VSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK 478
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDGSIARVLK 142
F ++ T I + ++ +G LA+A D +KL + G +
Sbjct: 479 QSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFN 538
Query: 143 GHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSW 202
GH+ PV LAF PN EY+AS ++ W ++ G K V G+ + + W
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG------KIVKTYTGN--GGIFEVCW 590
Query: 203 SPDGETLAVPGLKNDVVMYD 222
+ +G +A N V + D
Sbjct: 591 NKEGNKIAACFADNSVCVLD 610
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 196 (74.1 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 58 RHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM 117
+HH + V A SP+ L + S D V ++ G + P++ F+ G +
Sbjct: 24 QHHGE-VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRL 82
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
+A++ D I+L + VLKGH+ V ++F P+S+ LAS I WE+QSG
Sbjct: 83 IASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSG 142
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS---LRG 234
R +H L +G S+ +SP ++LA + V ++D + + S L G
Sbjct: 143 RRVHLL------VGHC-DSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEG 195
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIW 264
H I L +S +G +A+ S D+ I +W
Sbjct: 196 -HTGNISCLCYSASG-LLASGSWDKTICVW 223
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 57/240 (23%), Positives = 103/240 (42%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR V + SP+ +AS S DHS++L+ + + + ++F+
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA+ G D+ + G +L GH + F P S+ LA+ TV W+L++
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA 183
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL-FSLRGD 235
+ + + G+ ++ L +S G L G + + + T L L+G
Sbjct: 184 STPVVSYHNLEGHTGN----ISCLCYSASG--LLASGSWDKTICVWKPTTNNLPLQLKG- 236
Query: 236 HVQPICFLSWSPNGKYMATSSLDRQILIWD--VGKKLDIDRQKFDDRICCMAWKPIGNAL 293
H + L++SP+ +A++ R + +WD GK L+ + D C+ + P G L
Sbjct: 237 HTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI-FTPDGKLL 295
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 58/230 (25%), Positives = 104/230 (45%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ +SSS+ +I + D + S +L+ H+ V ++ SP+S LASG D +++
Sbjct: 82 LIASSSSDHSIRLWD-VARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV----LKGHKGP 147
G + I+ F+ + LA D + + + + S V L+GH G
Sbjct: 141 SGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWD-LRASTPVVSYHNLEGHTGN 199
Query: 148 VTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE 207
++ L + S LAS T+ W+ + +NL + +N L++SPD
Sbjct: 200 ISCLCYSA-SGLLASGSWDKTICVWKPTT----NNLPL---QLKGHTIWVNSLAFSPDEL 251
Query: 208 TLAVPGLKNDVVMYDRDTAEKLFSLRGD-HVQPICFLSWSPNGKYMATSS 256
LA G V ++D T + L +L+G V C ++P+GK + + +
Sbjct: 252 KLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI--FTPDGKLLVSGA 299
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 208 (78.3 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 74/296 (25%), Positives = 128/296 (43%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ + ++ T+ + L +I + H D V A S + +A+ S+D VK++
Sbjct: 366 IASCGADKTLQVFKAETGEKLLEI-KAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVT 424
Query: 93 GEFQTNITRFTLPIRVLAF-NKSGSMLAAAGD-DEGIKLINTIDGSIARVLKGHKGPVTG 150
GE + + + F N S +L A G D +KL + + GH V+
Sbjct: 425 GELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSH 484
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELH--NLKRVAPDIGSDPSSMNVL----SWSP 204
F P+ + LAS + GT+ W+++S E N+K+ + M V+ SWS
Sbjct: 485 CRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSA 544
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-- 262
DG +L V KN V++++ T L + H I + +SP+ ++A +L + +
Sbjct: 545 DGASLVVAA-KNKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSPSN-HLAVVALSQYCVEK 602
Query: 263 ----IWDVG---KKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311
IW G +KLD + F C ++P+ + + G G W S PS
Sbjct: 603 RGKFIWLPGSLERKLDYSKHFFTVLCCVFHFQPVCQPCPMCE--GVVGGWLSCSPS 656
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 64/245 (26%), Positives = 112/245 (45%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
K+ H GVT+L + + LA+G +D +V+L+ I L + F S
Sbjct: 50 KVFDKHILGVTSLDIDIGARYLATGGMDGTVRLFDLSTNTLHKTIDSGPLGCLKIGFLNS 109
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+ L + + I + + G R + V +A PN+E +A GTV+ +++
Sbjct: 110 ANNLVSVSESGNISIYSVETGEKLRSISNTNKQVLTMAISPNNEQIAVAGLDGTVLCYDV 169
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLR 233
+SGR + +K I S L +S D +T+ + + ++D +++ + SL
Sbjct: 170 ESGRRVSEIKAHGVPIRS-------LCFSSDSKTIFTGAEDSQIRLHDPNSSNPYIASLL 222
Query: 234 GDHVQPICFLSWSPNGKYMATS-SLDRQILIWDVG-KKLDIDRQKFDDRICCMAWKPIGN 291
G H I L S NG +A+S S+DR++ IWD+ +KLD D+ +A+ P
Sbjct: 223 G-HSSFIFSLVASSNGDLLASSGSIDRKVCIWDIKTRKLDSSFTAHADQTWDLAFSPDST 281
Query: 292 ALAVI 296
L +
Sbjct: 282 KLVSV 286
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 66/258 (25%), Positives = 113/258 (43%)
Query: 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALAL 69
E H G+ + + + HL + S T + H + P + H+D VT +
Sbjct: 12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWH--MKPQSRAYRFTGHKDAVTCVNF 69
Query: 70 SPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIK 128
SP+ LASGS D +V+++ P + ++ + R T +R + F G +L A DD+ +K
Sbjct: 70 SPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
+ +T L H V F P+ + S TV W+ S +H+
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC---- 184
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+ G + + + P G +A G+ N V ++D T +L H + LS+ P+
Sbjct: 185 EHGG---FVTYVDFHPSGTCIAAAGMDNTVKVWDTRT-HRLVQHYQLHSAAVNALSFHPS 240
Query: 249 GKYMATSSLDRQILIWDV 266
G Y+ T+S D + I D+
Sbjct: 241 GNYLITASSDSTLKILDL 258
Score = 190 (71.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 55/234 (23%), Positives = 107/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ + S + T+ I P + + R H V ++ + L + S D +VK++
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
F ++T+ +R F+ G ++ +A DD+ +KL + H G VT
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ TV W+ ++ R + + + + S +++N LS+ P G L
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQ-----LHS--AAVNALSFHPSGNYLI 245
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G+Y A+ D Q+++W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHG-HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 172 (65.6 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H VT + P+ TC+A+ +D++VK++
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDTR 217
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + L+F+ SG+ L A D +K+++ ++G + L GH+GP T +
Sbjct: 218 THRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF EY AS S V+ W+
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWK 299
Score = 172 (65.6 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 56/245 (22%), Positives = 108/245 (44%)
Query: 54 PKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
P + RH HRD VT + S N+ LASGS+D ++ ++ T + +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 111 FNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
F+ SG +LA+ D+ +++ + + G + V + H V + F + + L + TV
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
W R L +L + + + +SPDG + V ++D+ + E +
Sbjct: 128 KVWSTHRQRFLFSLTQHI-------NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKP 288
S +H + ++ + P+G +A + +D + +WD +L Q + +++ P
Sbjct: 181 HSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP 239
Query: 289 IGNAL 293
GN L
Sbjct: 240 SGNYL 244
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/184 (28%), Positives = 81/184 (44%)
Query: 1 MKVRSVKLREAHKCG-NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
+K S R AH + FCS D Q LVTAS +T + + L L
Sbjct: 92 VKGESTVFR-AHTATVRSVHFCS---DGQL--LVTASDDKT-VKVWSTHRQRFLFS-LTQ 143
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H + V SP+ + S S D +VKL+ E + + + F+ SG+ +A
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AAG D +K+ +T + + + H V L+F P+ YL + S T+ +L GR
Sbjct: 204 AAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRL 263
Query: 180 LHNL 183
L+ L
Sbjct: 264 LYTL 267
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 208 (78.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 63/244 (25%), Positives = 109/244 (44%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ + ++ T+ + L +I + H D V A S + +A+ S+D VK++
Sbjct: 630 IASCGADKTLQVFKAETGEKLLEI-KAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMT 688
Query: 93 GEFQTNITRFTLPIRVLAF-NKSGSMLAAAGDDEG-IKLINTIDGSIARVLKGHKGPVTG 150
GE + + F N S +L A G + +KL + + GH V
Sbjct: 689 GELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNH 748
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELH--NLKRVAPDIGSDPSSMNVL----SWSP 204
F P+ + LAS + GT+ W+ S E N+K+ ++ M V+ SWS
Sbjct: 749 CRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSA 808
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
DG + V KN + +++ D+ K+ RG H+ + + +SP+G TSS D+ I +W
Sbjct: 809 DGARIMVAA-KNKIFLWNTDSRSKVADCRG-HLSWVHGVMFSPDGSSFLTSSDDQTIRLW 866
Query: 265 DVGK 268
+ K
Sbjct: 867 ETKK 870
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 72/248 (29%), Positives = 116/248 (46%)
Query: 21 CSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
CS D + L T S S T P + +N +L+ H++ T + SP CLA+ S
Sbjct: 261 CSFSRDGKI--LATCSLSGVTKLWEMPQV-TNTIAVLKDHKERATDVVFSPVDDCLATAS 317
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D + KL+K G QT RV AF+ SG L D+ +L + G+ +
Sbjct: 318 ADRTAKLWKTDGTLLQTFEGHLDRLARV-AFHPSGKYLGTTSYDKTWRLWDINTGAELLL 376
Query: 141 LKGHKGPVTGLAFDPNSEYLAS--IDSIGTVIYWELQSGRELHNLK-RVAPDIGSDPSSM 197
+GH V G+AF + AS +DS+ V W+L++GR + + + P S+
Sbjct: 377 QEGHSRSVYGIAFQQDGALAASCGLDSLARV--WDLRTGRSILVFQGHIKPVF-----SV 429
Query: 198 NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN-GKYMATSS 256
N +SP+G LA G N ++D + L+ + H + + + P G ++AT+S
Sbjct: 430 N---FSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPA-HANLVSQVKYEPQEGYFLATAS 485
Query: 257 LDRQILIW 264
D ++ IW
Sbjct: 486 YDMKVNIW 493
Score = 169 (64.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 53/204 (25%), Positives = 95/204 (46%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRV-LAFNKSGSMLAAAG 122
+T + S + LA+ S+ KL++ P + + + F+ LA A
Sbjct: 258 LTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATAS 317
Query: 123 DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN 182
D KL T DG++ + +GH + +AF P+ +YL + T W++ +G EL
Sbjct: 318 ADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELL- 375
Query: 183 LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICF 242
L+ G S + ++ DG A GL + ++D T + +G H++P+
Sbjct: 376 LQE-----GHSRSVYGI-AFQQDGALAASCGLDSLARVWDLRTGRSILVFQG-HIKPVFS 428
Query: 243 LSWSPNGKYMATSSLDRQILIWDV 266
+++SPNG ++A+ D Q IWD+
Sbjct: 429 VNFSPNGYHLASGGEDNQCRIWDL 452
Score = 133 (51.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 51/218 (23%), Positives = 92/218 (42%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H D + +A P+ L + S D + +L+ G + + +AF + G++ A
Sbjct: 338 HLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAA 397
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
+ G D ++ + G V +GH PV + F PN +LAS W+L+ +
Sbjct: 398 SCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457
Query: 180 LHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
L+ + P + + ++ + + P +G LA V ++ + SL G H
Sbjct: 458 LY----IIP---AHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAG-HES 509
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
+ L + + +AT S DR I +W D D +K
Sbjct: 510 KVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEK 547
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF-----PGGEFQTNITRFTLPIRVLAF 111
L H V+++ S + LAS S D +++ Y P E T I +AF
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
+ + +A DD+ +KL + GS+ + L GH + F+P S + S TV
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W++ +G+ L +V P SDP + + ++ DG + ++D T + +
Sbjct: 140 WDVTTGKCL----KVLP-AHSDP--VTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L D P+ F+ +SPNGK++ +LD + +W++
Sbjct: 193 LIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Score = 191 (72.3 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 69/282 (24%), Positives = 134/282 (47%)
Query: 22 SILWDQQAHHLVTASSSET----TIS-IHDPLLPSNLPKILRHHRDGVTALALSPNSTCL 76
S+ + L +AS+ +T TI+ I+DP+ + + H +G++ +A S ++ +
Sbjct: 29 SVKFSSDGRLLASASADKTIRTYTINTINDPI--AEPVQEFTGHENGISDVAFSSDARFI 86
Query: 77 ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS 136
S S D ++KL+ G + T + FN +M+ + DE +++ + G
Sbjct: 87 VSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGK 146
Query: 137 IARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSS 196
+VL H PVT + F+ + + S G W+ +G H +K + D +P
Sbjct: 147 CLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTG---HCVKTLIDD--ENPP- 200
Query: 197 MNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP-ICFLS-WS-PNGKYMA 253
++ + +SP+G+ + V L N + +++ +A+ L + G HV C S +S NGK +
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTG-HVNAQYCISSAFSVTNGKRIV 259
Query: 254 TSSLDRQILIWDVG-KKLDIDRQKFDDRICCMAWKPIGNALA 294
+ S D + +W++ KKL + + + +A P N +A
Sbjct: 260 SGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIA 301
Score = 172 (65.6 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 55/258 (21%), Positives = 121/258 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ + + A +V+AS +T + + D + +L K L H + + +P S
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKT-LKLWD-VETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ SGS D +V+++ G+ + + P+ + FN+ GS++ ++ D ++ ++
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 135 GSIARVLKGHKGP-VTGLAFDPNSEYL--ASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
G + L + P V+ + F PN +++ ++D+ T+ W + S + L K +
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDN--TLRLWNISSAKFL---KTYTGHVN 241
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + S + +G+ + N V M++ ++ + L L G H + + ++ P
Sbjct: 242 AQYCISSAFSVT-NGKRIVSGSEDNCVHMWELNSKKLLQKLEG-HTETVMNVACHPTENL 299
Query: 252 MATSSLDRQILIWDVGKK 269
+A+ SLD+ + IW K+
Sbjct: 300 IASGSLDKTVRIWTQKKE 317
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 203 (76.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 65/247 (26%), Positives = 105/247 (42%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ S + I D S L KIL H V + SP+ L S S D +V+L+
Sbjct: 515 LIDKESDDVLERIMDEKTASEL-KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
P+ F+ G + G D +L T R+ GH V
Sbjct: 574 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 633
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PNS Y+A+ + TV W++ +G N R+ ++ L++SP+G LA
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLNG----NCVRI---FTGHKGPIHSLTFSPNGRFLAT 686
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL- 270
V+++D + L+G H +C L +S +G+ +A+ S+D + +WD K
Sbjct: 687 GATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 745
Query: 271 DIDRQKF 277
D++ F
Sbjct: 746 DVETDDF 752
Score = 171 (65.3 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 77/305 (25%), Positives = 134/305 (43%)
Query: 39 ETTISIHDPLLPSNLPKI----LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94
ETT + L P LP I + G+TA+ ++ +S+ +A G D +V+++
Sbjct: 446 ETTKRVR--LGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW------ 497
Query: 95 FQTNITRFTLPIRVLAFNKSG--SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152
++T P ++ + ++ S++ DD ++++ S ++L GH GPV G +
Sbjct: 498 ---SVT----PKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 550
Query: 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212
F P+ YL S GTV W LQ+ L K G + + +SP G
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK------GHNYPVWDT-QFSPYGYYFVSG 603
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKL 270
G ++ D + L G H+ + + PN Y+AT S DR + +WDV G +
Sbjct: 604 GHDRVARLWATDHYQPLRIFAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 271 DIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE---SVVPSSMKSPTEDIPSSRSNY 327
I I + + P G LA G+ +W+ ++ +K T+ + S R +
Sbjct: 663 RIFTGH-KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 328 NGLLL 332
+G +L
Sbjct: 722 DGEIL 726
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 202 (76.2 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 64/241 (26%), Positives = 106/241 (43%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
+L+ S + I D S KIL H V ++ SP+ L S S D +++L+
Sbjct: 470 NLIDKESDDVLERIMDEKTSSE-SKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSL 528
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
P+ F+ G + G D +L T R+ GH VT
Sbjct: 529 QTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTC 588
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
F PNS Y+A+ S TV W++ +G N R+ ++ L++SP+G+ LA
Sbjct: 589 TRFHPNSNYVATGSSDRTVRLWDVLNG----NCVRI---FTGHKGPIHSLAFSPNGKFLA 641
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
V+++D + L+G H I L +S +G+ +A+ S+D + +WDV + +
Sbjct: 642 SGSTDGRVLLWDIGHGLMIAELKG-HTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAI 700
Query: 271 D 271
D
Sbjct: 701 D 701
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 202 (76.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 65/247 (26%), Positives = 105/247 (42%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ S + I D S L KIL H V + SP+ L S S D +V+L+
Sbjct: 516 LIDKESDDVLERIMDEKTASEL-KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 574
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
P+ F+ G + G D +L T R+ GH V
Sbjct: 575 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 634
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PNS Y+A+ + TV W++ +G N R+ ++ L++SP+G LA
Sbjct: 635 RFHPNSNYVATGSADRTVRLWDVLNG----NCVRI---FTGHKGPIHSLTFSPNGRFLAT 687
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL- 270
V+++D + L+G H +C L +S +G+ +A+ S+D + +WD K
Sbjct: 688 GATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Query: 271 DIDRQKF 277
D++ F
Sbjct: 747 DLETDDF 753
Score = 171 (65.3 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 77/305 (25%), Positives = 134/305 (43%)
Query: 39 ETTISIHDPLLPSNLPKI----LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94
ETT + L P LP I + G+TA+ ++ +S+ +A G D +V+++
Sbjct: 447 ETTKRVR--LGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW------ 498
Query: 95 FQTNITRFTLPIRVLAFNKSG--SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152
++T P ++ + ++ S++ DD ++++ S ++L GH GPV G +
Sbjct: 499 ---SVT----PKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 551
Query: 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212
F P+ YL S GTV W LQ+ L K G + + +SP G
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK------GHNYPVWDT-QFSPYGYYFVSG 604
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKL 270
G ++ D + L G H+ + + PN Y+AT S DR + +WDV G +
Sbjct: 605 GHDRVARLWATDHYQPLRIFAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 271 DIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE---SVVPSSMKSPTEDIPSSRSNY 327
I I + + P G LA G+ +W+ ++ +K T+ + S R +
Sbjct: 664 RIFTGH-KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 328 NGLLL 332
+G +L
Sbjct: 723 DGEIL 727
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 199 (75.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 63/240 (26%), Positives = 102/240 (42%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ S + I D S L KIL H V + SP+ L S S D +V+L+
Sbjct: 275 LIDKESDDVLERIMDEKTASEL-KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 333
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
P+ F+ G + G D +L T R+ GH V
Sbjct: 334 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 393
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PNS Y+A+ + TV W++ +G N R+ ++ L++SP+G LA
Sbjct: 394 RFHPNSNYVATGSADRTVRLWDVLNG----NCVRI---FTGHKGPIHSLTFSPNGRFLAT 446
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLD 271
V+++D + L+G H +C L +S +G+ +A+ S+D + +WD K +
Sbjct: 447 GATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 505
Score = 179 (68.1 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 78/306 (25%), Positives = 136/306 (44%)
Query: 39 ETTISIHDPLLPSNLPKI-----LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG 93
ETT + L P LP I L ++ G+TA+ ++ +S+ +A G D +V+++
Sbjct: 205 ETTKRVR--LGPDCLPSICFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVW----- 257
Query: 94 EFQTNITRFTLPIRVLAFNKSG--SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++T P ++ + ++ S++ DD ++++ S ++L GH GPV G
Sbjct: 258 ----SVT----PKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 309
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
+F P+ YL S GTV W LQ+ L K G + + +SP G
Sbjct: 310 SFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK------GHNYPVWDT-QFSPYGYYFVS 362
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKK 269
G ++ D + L G H+ + + PN Y+AT S DR + +WDV G
Sbjct: 363 GGHDRVARLWATDHYQPLRIFAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 421
Query: 270 LDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE---SVVPSSMKSPTEDIPSSRSN 326
+ I I + + P G LA G+ +W+ ++ +K T+ + S R +
Sbjct: 422 VRIFTGH-KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 480
Query: 327 YNGLLL 332
+G +L
Sbjct: 481 RDGEIL 486
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 52/176 (29%), Positives = 79/176 (44%)
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
DH L F G N TRF + + + +A D ++L + ++G+ R+
Sbjct: 375 DHYQPLRIFAGHLADVNCTRF---------HPNSNYVATGSADRTVRLWDVLNGNCVRIF 425
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
GHKGP+ L F PN +LA+ + G V+ W++ G + LK + S L
Sbjct: 426 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS-------LR 478
Query: 202 WSPDGETLAVPGLKNDVVMYDRDTAEKLFS-LRGDHVQPICFLSWSPNGKYMATSS 256
+S DGE LA + N V ++D A K F L D+ Q + G YM S+
Sbjct: 479 FSRDGEILASGSMDNTVRLWD---AVKAFEDLETDNSQELLL------GTYMTKST 525
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 196 (74.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 66/258 (25%), Positives = 112/258 (43%)
Query: 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALAL 69
E H G+ + + + HL + S T + H + P + H+D VT +
Sbjct: 12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWH--MKPQSRAYRFTGHKDAVTCVNF 69
Query: 70 SPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIK 128
SP+ LASGS D +V+++ P + ++ + R T +R + F G L A DD+ +K
Sbjct: 70 SPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
+ +T L H V F P+ + S TV W+ S +H+
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC---- 184
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+ G + + + P G +A G+ N V ++D T +L H + LS+ P+
Sbjct: 185 EHGG---FVTYVDFHPSGTCIAAAGMDNTVKVWDART-HRLLQHYQLHSAAVNALSFHPS 240
Query: 249 GKYMATSSLDRQILIWDV 266
G Y+ T+S D + I D+
Sbjct: 241 GNYLITASSDSTLKILDL 258
Score = 192 (72.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 56/234 (23%), Positives = 107/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ + S + T+ I P + + R H V ++ + L + S D +VK++
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
F ++T+ +R F+ G ++ +A DD+ +KL + H G VT
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTY 192
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ TV W+ ++ R L + + + S +++N LS+ P G L
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQ-----LHS--AAVNALSFHPSGNYLI 245
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G+Y A+ D Q+++W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHG-HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H VT + P+ TC+A+ +D++VK++
Sbjct: 159 LIVSASDDKTVKLWDKTSRECIHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDAR 217
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + L+F+ SG+ L A D +K+++ ++G + L GH+GP T +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF EY AS S V+ W+
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWK 299
Score = 171 (65.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 56/245 (22%), Positives = 108/245 (44%)
Query: 54 PKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
P + RH HRD VT + S N+ LASGS+D ++ ++ T + +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 111 FNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
F+ SG +LA+ D+ +++ + + G + V + H V + F + + L + TV
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
W R L +L + + + +SPDG + V ++D+ + E +
Sbjct: 128 KVWSTHRQRFLFSLTQHI-------NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECI 180
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKP 288
S +H + ++ + P+G +A + +D + +WD +L Q + +++ P
Sbjct: 181 HSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP 239
Query: 289 IGNAL 293
GN L
Sbjct: 240 SGNYL 244
Score = 129 (50.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 1 MKVRSVKLREAHKCG-NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
+K S R AH + FCS D Q+ LVTAS +T + + L L
Sbjct: 92 VKGESTVFR-AHTATVRSVHFCS---DGQS--LVTASDDKT-VKVWSTHRQRFLFS-LTQ 143
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H + V SP+ + S S D +VKL+ E + + + F+ SG+ +A
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AAG D +K+ + + + + H V L+F P+ YL + S T+ +L GR
Sbjct: 204 AAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRL 263
Query: 180 LHNL 183
L+ L
Sbjct: 264 LYTL 267
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 201 (75.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 65/247 (26%), Positives = 105/247 (42%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ S + I D S L KIL H V + SP+ L S S D +V+L+
Sbjct: 513 LIDKESDDVLERIMDEKTASEL-KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 571
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
P+ F+ G + G D +L T R+ GH V
Sbjct: 572 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 631
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PNS Y+A+ + TV W++ +G N R+ ++ L++SP+G LA
Sbjct: 632 RFHPNSNYVATGSADRTVRLWDVLNG----NCVRI---FTGHKGPIHSLTFSPNGRFLAT 684
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL- 270
V+++D + L+G H +C L +S +G+ +A+ S+D + +WD K
Sbjct: 685 GATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 743
Query: 271 DIDRQKF 277
D++ F
Sbjct: 744 DLETDDF 750
Score = 171 (65.3 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 78/303 (25%), Positives = 131/303 (43%)
Query: 39 ETTISIHDPLLPSNLPKI----LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94
ETT + L P LP I + G+TA+ ++ +S+ +A G D +V+++
Sbjct: 444 ETTKRVR--LGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW------ 495
Query: 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154
++T L R + S++ DD ++++ S ++L GH GPV G +F
Sbjct: 496 ---SVTPKKL--RSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFS 550
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL 214
P+ YL S GTV W LQ+ L K G + + +SP G G
Sbjct: 551 PDRNYLLSSSEDGTVRLWSLQTFTCLVGYK------GHNYPVWDT-QFSPYGYYFVSGGH 603
Query: 215 KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDI 272
++ D + L G H+ + + PN Y+AT S DR + +WDV G + I
Sbjct: 604 DRVARLWATDHYQPLRIFAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRI 662
Query: 273 DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE---SVVPSSMKSPTEDIPSSRSNYNG 329
I + + P G LA G+ +W+ ++ +K T+ + S R + +G
Sbjct: 663 FTGH-KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 721
Query: 330 LLL 332
+L
Sbjct: 722 EIL 724
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 201 (75.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 65/247 (26%), Positives = 105/247 (42%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ S + I D S L KIL H V + SP+ L S S D +V+L+
Sbjct: 515 LIDKESDDVLERIMDEKTASEL-KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
P+ F+ G + G D +L T R+ GH V
Sbjct: 574 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 633
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PNS Y+A+ + TV W++ +G N R+ ++ L++SP+G LA
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLNG----NCVRI---FTGHKGPIHSLTFSPNGRFLAT 686
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL- 270
V+++D + L+G H +C L +S +G+ +A+ S+D + +WD K
Sbjct: 687 GATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 745
Query: 271 DIDRQKF 277
D++ F
Sbjct: 746 DLETDDF 752
Score = 171 (65.3 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 78/303 (25%), Positives = 131/303 (43%)
Query: 39 ETTISIHDPLLPSNLPKI----LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94
ETT + L P LP I + G+TA+ ++ +S+ +A G D +V+++
Sbjct: 446 ETTKRVR--LGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW------ 497
Query: 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154
++T L R + S++ DD ++++ S ++L GH GPV G +F
Sbjct: 498 ---SVTPKKL--RSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFS 552
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL 214
P+ YL S GTV W LQ+ L K G + + +SP G G
Sbjct: 553 PDRNYLLSSSEDGTVRLWSLQTFTCLVGYK------GHNYPVWDT-QFSPYGYYFVSGGH 605
Query: 215 KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDI 272
++ D + L G H+ + + PN Y+AT S DR + +WDV G + I
Sbjct: 606 DRVARLWATDHYQPLRIFAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRI 664
Query: 273 DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE---SVVPSSMKSPTEDIPSSRSNYNG 329
I + + P G LA G+ +W+ ++ +K T+ + S R + +G
Sbjct: 665 FTGH-KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 723
Query: 330 LLL 332
+L
Sbjct: 724 EIL 726
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 197 (74.4 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 53/233 (22%), Positives = 109/233 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
LV +SS + T+ + P + + + H V ++ S + L + S D SVK++
Sbjct: 74 LVASSSRDQTVRLWTPSIKGE-STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVE 132
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+F ++ R T +R F+ G ++A+ GDD ++L +T + + G T +
Sbjct: 133 RKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFV 192
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F+ + +AS + T+ W++++ + + + K + G +N S+ P G L
Sbjct: 193 DFNSSGTCIASSGADNTIKIWDIRTNKLIQHYK--VHNAG-----VNCFSFHPSGNYLIS 245
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D +++L G H P+ +++S +G A+ D Q+L+W
Sbjct: 246 GSSDSTIKILDLLEGRLIYTLHG-HKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 185 (70.2 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 60/245 (24%), Positives = 113/245 (46%)
Query: 54 PKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
P + RH H+D ++ +PN+ LA+GS D S+ ++ T I +
Sbjct: 8 PTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVN 67
Query: 111 FNKSGSMLAAAGDDEGIKLIN-TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
F SGS++A++ D+ ++L +I G + V K H V + F + + L + +V
Sbjct: 68 FAPSGSLVASSSRDQTVRLWTPSIKGE-STVFKAHTASVRSVHFSRDGQRLVTASDDKSV 126
Query: 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
W ++ + L++L R + + +SPDG +A G V ++D ++ +
Sbjct: 127 KVWGVERKKFLYSLNR-------HTNWVRCARFSPDGRLIASCGDDRTVRLWDT-SSHQC 178
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDR-ICCMAWKP 288
++ D+ F+ ++ +G +A+S D I IWD+ I K + + C ++ P
Sbjct: 179 INIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHP 238
Query: 289 IGNAL 293
GN L
Sbjct: 239 SGNYL 243
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 52/208 (25%), Positives = 93/208 (44%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSML 118
H D +T + +P+ + +AS S D +V+L+ P + ++ + + T +R + F++ G L
Sbjct: 59 HTDVITGVNFAPSGSLVASSSRDQTVRLWT-PSIKGESTVFKAHTASVRSVHFSRDGQRL 117
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A DD+ +K+ L H V F P+ +AS TV W+ S
Sbjct: 118 VTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSS-- 175
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
H + D G S + ++ G +A G N + ++D T + + + +
Sbjct: 176 --HQCINIFTDYGG---SATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAG 230
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDV 266
CF S+ P+G Y+ + S D I I D+
Sbjct: 231 VNCF-SFHPSGNYLISGSSDSTIKILDL 257
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ + + T+ + D + I + T + + + TC+AS D+++K++
Sbjct: 158 LIASCGDDRTVRLWDTSSHQCI-NIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + +F+ SG+ L + D IK+++ ++G + L GHKGPV +
Sbjct: 217 TNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTV 276
Query: 152 AFDPNSEYLASIDSIGTVIYWELQ----SGREL---HNLKRVAPD 189
F + + AS + V+ W+ + REL H+ KRV PD
Sbjct: 277 TFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHS-KRVTPD 320
Score = 143 (55.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 57/228 (25%), Positives = 97/228 (42%)
Query: 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTC 75
+ AS S+ + + LVTAS ++ + + L + RH + V SP+
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKS-VKVWGVERKKFLYSLNRH-TNWVRCARFSPDGRL 158
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG 135
+AS D +V+L+ + T + + FN SG+ +A++G D IK+ +
Sbjct: 159 IASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTN 218
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPS 195
+ + K H V +F P+ YL S S T+ +L GR ++ L G
Sbjct: 219 KLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLH------GHKGP 272
Query: 196 SMNVLSWSPDGETLAVPGLKNDVVM----YDRDTAEKLFSLRGDHVQP 239
+ V ++S DG+ A G + V+M +D +L S V P
Sbjct: 273 VLTV-TFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVTP 319
>UNIPROTKB|C9JYB3 [details] [associations]
symbol:WDHD1 "WD repeat and HMG-box DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0033044 "regulation of chromosome
organization" evidence=IEA] [GO:0070063 "RNA polymerase binding"
evidence=IEA] [GO:0070829 "heterochromatin maintenance"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 HGNC:HGNC:23170
EMBL:AL160471 HOGENOM:HOG000170076 IPI:IPI00879598
ProteinModelPortal:C9JYB3 SMR:C9JYB3 STRING:C9JYB3
Ensembl:ENST00000455555 ArrayExpress:C9JYB3 Bgee:C9JYB3
Uniprot:C9JYB3
Length = 168
Score = 175 (66.7 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 9 REAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALA 68
R+ + G+ + +D +VT S + + I + L + PK + G A +
Sbjct: 5 RKPMRYGHTEGHTEVCFDDSGSFIVTCGS-DGDVRIWEDLDDDD-PKFINV---GEKAYS 59
Query: 69 LSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128
+ S L + +++++++ FP G +TRFT + FN G+ +AA D +K
Sbjct: 60 CALKSGKLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVK 119
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+++ +D S + +GH PV L+FDP +LAS G+V W++
Sbjct: 120 IVDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQI 165
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 199 (75.1 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 64/247 (25%), Positives = 105/247 (42%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ S + I D S L KIL H V + SP+ L S S D +V+L+
Sbjct: 516 LIDKESDDVLERIMDEKTASEL-KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 574
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
P+ F+ G + G D +L T R+ GH V
Sbjct: 575 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 634
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
+ PNS Y+A+ + TV W++ +G N R+ ++ L++SP+G LA
Sbjct: 635 RYHPNSNYVATGSADRTVRLWDVLNG----NCVRI---FTGHKGPIHSLTFSPNGRFLAT 687
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL- 270
V+++D + L+G H +C L +S +G+ +A+ S+D + +WD K
Sbjct: 688 GATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Query: 271 DIDRQKF 277
D++ F
Sbjct: 747 DLETDDF 753
Score = 172 (65.6 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 78/303 (25%), Positives = 131/303 (43%)
Query: 39 ETTISIHDPLLPSNLPKI----LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94
ETT + L P LP I + G+TA+ ++ +S+ +A G D +V+++
Sbjct: 447 ETTKRVR--LGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVW------ 498
Query: 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154
++T L R + S++ DD ++++ S ++L GH GPV G +F
Sbjct: 499 ---SVTPKKL--RSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFS 553
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL 214
P+ YL S GTV W LQ+ L K G + + +SP G G
Sbjct: 554 PDRNYLLSSSEDGTVRLWSLQTFTCLVGYK------GHNYPVWDT-QFSPYGYYFVSGGH 606
Query: 215 KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDI 272
++ D + L G H+ + + PN Y+AT S DR + +WDV G + I
Sbjct: 607 DRVARLWATDHYQPLRIFAG-HLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRI 665
Query: 273 DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE---SVVPSSMKSPTEDIPSSRSNYNG 329
I + + P G LA G+ +W+ ++ +K T+ + S R + +G
Sbjct: 666 FTGH-KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 724
Query: 330 LLL 332
+L
Sbjct: 725 EIL 727
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 193 (73.0 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 55/234 (23%), Positives = 109/234 (46%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ + S + T+ I P + + R H V ++ + L + S D +VK++
Sbjct: 74 HLLASGSRDKTVRIWIPNVKGE-STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+F ++++ +R F+ G ++ +A DD+ +KL + H G VT
Sbjct: 133 HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ TV W++++ R L + + + S +++N LS+ P G L
Sbjct: 193 VDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQ-----LHS--AAVNALSFHPSGNYLL 245
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G+Y A+ D Q+++W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHG-HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 64/258 (24%), Positives = 110/258 (42%)
Query: 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALAL 69
E H G+ + S+ + L + S + H + P + H+D VT +
Sbjct: 12 ERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWH--MKPQSRAYRFAGHKDAVTCVNF 69
Query: 70 SPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIK 128
SP+ LASGS D +V+++ P + ++ + R T +R + F G L A DD+ +K
Sbjct: 70 SPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
+ +T L H V F P+ + S TV W+ S +H+
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC---- 184
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+ G + + + P G +A + N V ++D T +L H + LS+ P+
Sbjct: 185 EHGG---FVTYVDFHPSGTCIAAASMDNTVKVWDVRT-HRLLQHYQLHSAAVNALSFHPS 240
Query: 249 GKYMATSSLDRQILIWDV 266
G Y+ T+S D + I D+
Sbjct: 241 GNYLLTASSDSTLKILDL 258
Score = 177 (67.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H VT + P+ TC+A+ S+D++VK++
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHG-GFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + L+F+ SG+ L A D +K+++ ++G + L GH+GP T +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF EY AS S V+ W+
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWK 299
Score = 168 (64.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 56/245 (22%), Positives = 109/245 (44%)
Query: 54 PKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
P + RH HRD +T++ S N+ LASGS+D + ++ + +
Sbjct: 9 PSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVN 68
Query: 111 FNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
F+ SG +LA+ D+ +++ I + G + V + H V + F + + L + TV
Sbjct: 69 FSPSGHLLASGSRDKTVRIWIPNVKGE-STVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
W + L +L + + + +SPDG + V ++D+ + E +
Sbjct: 128 KVWSTHRQKFLFSLSQHI-------NWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKP 288
S +H + ++ + P+G +A +S+D + +WDV +L Q + +++ P
Sbjct: 181 HSYC-EHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP 239
Query: 289 IGNAL 293
GN L
Sbjct: 240 SGNYL 244
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 51/184 (27%), Positives = 80/184 (43%)
Query: 1 MKVRSVKLREAHKCG-NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
+K S R AH + FCS D Q+ LVTAS +T + + L L
Sbjct: 92 VKGESTVFR-AHTATVRSVHFCS---DGQS--LVTASDDKT-VKVWSTHRQKFLFS-LSQ 143
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H + V SP+ + S S D +VKL+ E + + + F+ SG+ +A
Sbjct: 144 HINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AA D +K+ + + + + H V L+F P+ YL + S T+ +L GR
Sbjct: 204 AASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRL 263
Query: 180 LHNL 183
L+ L
Sbjct: 264 LYTL 267
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 195 (73.7 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 67/251 (26%), Positives = 114/251 (45%)
Query: 23 ILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSP---NSTC--LA 77
+ W + + TA E I I P L L+ H +T L+ P N C LA
Sbjct: 188 VAWSPDSKKIATAGM-EGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLA 246
Query: 78 SGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSI 137
S S D +++++ + +++ T+ + L + G ++ + D +++ NT DG +
Sbjct: 247 SSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRL 305
Query: 138 ARVLKGHKGPVTGLAFDPNSEYL---ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
RVL GH V LA N++Y+ S D G Y L+ + + L+R D+ +
Sbjct: 306 VRVLDGHAHWVNTLAL--NTDYVLRTGSYDHTGKE-YDTLEEAQRVA-LERYN-DVKAKS 360
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
M +L D T V+M++ + S H Q I +S+SP+G+Y A+
Sbjct: 361 KGMEILISGSDDFT---------VIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFAS 411
Query: 255 SSLDRQILIWD 265
+S D+ I +WD
Sbjct: 412 ASFDKSIKLWD 422
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S + W + L+ + S + T+ + + L ++L H V LAL+ +
Sbjct: 270 GHTMSVTCLKWGGEG--LIYSGSQDRTVRVFNTT-DGRLVRVLDGHAHWVNTLALNTDYV 326
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLIN--T 132
L +GS DH+ K Y + + R+ V A +K +L + DD + + N
Sbjct: 327 -LRTGSYDHTGKEYDTLEEAQRVALERYN---DVKAKSKGMEILISGSDDFTVIMWNPSV 382
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS 192
SI+R L GH+ + ++F P+ Y AS ++ W+ QSG+ L N + +G+
Sbjct: 383 TKTSISR-LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRG---HVGA 438
Query: 193 DPSSMNVLSWSPDGETLAVPGLKNDVV-MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ + WS D L V G K+ + ++D T + L G H + + WSP+G
Sbjct: 439 ----VYQVCWSSDSRYL-VSGSKDSTLKIWDIKTKKMEKELPG-HADEVYTVDWSPDGDR 492
Query: 252 MATSSLDRQILIWDV 266
+A+ S DR + IW V
Sbjct: 493 VASGSKDRLLRIWTV 507
Score = 172 (65.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 66/263 (25%), Positives = 112/263 (42%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ +SS ++TI I D NL L H VT L + SGS D +V+++
Sbjct: 245 LASSSKDSTIRIWDTESCKNLMS-LSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTTD 302
Query: 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152
G + + LA N + + D G K +T++ + RV V A
Sbjct: 303 GRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTG-KEYDTLEEA-QRVALERYNDVK--A 358
Query: 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212
E L S TVI W + ++ R+ +N++S+SPDG A
Sbjct: 359 KSKGMEILISGSDDFTVIMWNPSVTKT--SISRLT----GHQQLINLVSFSPDGRYFASA 412
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLD 271
+ ++D + + L + RG HV + + WS + +Y+ + S D + IWD+ KK++
Sbjct: 413 SFDKSIKLWDGQSGKFLGNFRG-HVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKME 471
Query: 272 IDRQKFDDRICCMAWKPIGNALA 294
+ D + + W P G+ +A
Sbjct: 472 KELPGHADEVYTVDWSPDGDRVA 494
Score = 149 (57.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 45/155 (29%), Positives = 69/155 (44%)
Query: 138 ARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSM 197
A + GH V AF P+ + S+ TV W++ + H LK G +
Sbjct: 133 ASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLK------GHTNWVL 186
Query: 198 NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP---NGKY--M 252
V +WSPD + +A G++ D+ ++ T ++L S H + I LSW P N K +
Sbjct: 187 QV-AWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRL 245
Query: 253 ATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAW 286
A+SS D I IWD K + + C+ W
Sbjct: 246 ASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKW 280
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 38/160 (23%), Positives = 74/160 (46%)
Query: 110 AFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
AF+ G + G D +++ + + LKGH V +A+ P+S+ +A+ G +
Sbjct: 147 AFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDI 206
Query: 170 IYWELQSGRELHN-LK---RVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225
W Q+G++L + LK + + +P +N P LA + + ++D ++
Sbjct: 207 RIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLN-----PKCVRLASSSKDSTIRIWDTES 261
Query: 226 AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+ L SL G H + L W G + + S DR + +++
Sbjct: 262 CKNLMSLSG-HTMSVTCLKWGGEG-LIYSGSQDRTVRVFN 299
>CGD|CAL0000499 [details] [associations]
symbol:orf19.6247 species:5476 "Candida albicans" [GO:0003682
"chromatin binding" evidence=IEA] [GO:0031298 "replication fork
protection complex" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0000727
"double-strand break repair via break-induced replication"
evidence=IEA] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IEA] [GO:0006270 "DNA replication
initiation" evidence=IEA] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] InterPro:IPR017986 InterPro:IPR015943 CGD:CAL0000499
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AACQ01000037
RefSeq:XP_718836.1 ProteinModelPortal:Q5AB02 STRING:Q5AB02
GeneID:3639544 KEGG:cal:CaO19.6247 Uniprot:Q5AB02
Length = 871
Score = 141 (54.7 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 47/219 (21%), Positives = 90/219 (41%)
Query: 585 PLKGRLPLTPGSQLTWFGFSEEGQLSSYDSKG-ILRVYTNLYGGSWLPIFSASK------ 637
PLK PL G + + F++ + D IL + W+PI + K
Sbjct: 648 PLKDHTPLIKG--IFFNEFNDPCIVGGEDDTLLILHSWRESNNAKWIPILNCHKVLTEYG 705
Query: 638 --DKKSDENYWIVGLNASKLFCIVCKNPDLFPQVMPKPVLTLLDLSFPLASSDLGAETLE 695
K + W +G KL C++ KN +P P P+ L++ P+ + E E
Sbjct: 706 TNSNKKNWKCWPLGFIGDKLNCLILKNNSQYPG-FPLPLPIELEVELPIKNKFEEDEAEE 764
Query: 696 NEFMMNNFHLSQ-IPKRMEEVTDAGLDTSSLDDEAFNLEAAQDRCILRLIASCCNGDKLV 754
N + + L + I + + ++ + + D+ +L+L C KL
Sbjct: 765 N--FLRSLTLGKLISDSLNDELPGEIEEDEVMERLNQYSMLFDKSLLKLFGESCKESKLG 822
Query: 755 RATELVKLLSLDKSMQGAIKLVTKLKLPNLAERFNSILE 793
+A + +L+ DK++ A ++ +++ NLA + + E
Sbjct: 823 KAFSIARLIKTDKALLAASRIAERMEFLNLASKIGQLRE 861
Score = 111 (44.1 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 75/357 (21%), Positives = 142/357 (39%)
Query: 118 LAAAGDDEGIKLINTID--GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
L G+++ ++TI + + G ++ ++ + + S+ + + + +
Sbjct: 122 LQTTGEEDSNNKVSTISLPDQVVNISYNTSGELSAISLSNGNVQIYSVVNEQPNLIYTIN 181
Query: 176 S--GRELH-NLKRVA-PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDR-DTAEKLF 230
S ++H ++ +V D D WS +G+ L VP + N + +YDR D + +
Sbjct: 182 SVIPTKIHTSMDKVDYNDEHHDELFSTKTQWSTNGQLLLVPTIDNQIHVYDRQDWTKVVK 241
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDR-QILIWDVGKKLDIDRQKFDDR--ICCMAWK 287
D+V+ I F + S G +A SL+ ++ + K ++ D +FD+ + WK
Sbjct: 242 EFNNDNVKIIDF-NLSAQGN-LAIMSLNSFKVYNFSSEKLINEDDFEFDEDGYPLNIIWK 299
Query: 288 P--------IGNALAVIDVMGKYGVWESVVPSSMKSPTEDIPSSRSNYNGLLLFDEEEKE 339
+G L + +V+ G + V+ S S E+ G EE E
Sbjct: 300 DNNLFVGSTVGETLHLRNVVK--GKTDDVLNSLFISDAEEEEEEEEREVGRKKLGVEEDE 357
Query: 340 PSTSGSL---SDLGEDSHGESEMPSRKRLRKQTXXXXXXXXXXXXXXXXXPKTESR--KK 394
+ + +L SD+ +D + E + RKR R+ + R
Sbjct: 358 GNDTDALLRDSDIEQDINVEDRIGQRKRNRRPYKLHEEDDLVIDEDDNENLGFDDRVVSN 417
Query: 395 AHST--HKEYSDKGNGSRSMRTSTRKNMQEAFQPGATPVQ----PGKRRFLCYNMLG 445
+ST HK Y + + S K + PG+TP + RR+L N +G
Sbjct: 418 GYSTNGHKRYKSRSPSEAIPKISKIK----PYSPGSTPFEHRGASADRRYLTMNNIG 470
Score = 96 (38.9 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 53/236 (22%), Positives = 84/236 (35%)
Query: 347 SDLGEDSHGESEMPSRKRLRKQTXXXXXXXXXXXXXXXXXPKTESR--KKAHST--HKEY 402
SD+ +D + E + RKR R+ + R +ST HK Y
Sbjct: 368 SDIEQDINVEDRIGQRKRNRRPYKLHEEDDLVIDEDDNENLGFDDRVVSNGYSTNGHKRY 427
Query: 403 SDKGNGSRSMRTSTRKNMQEAFQPGATPVQ----PGKRRFLCYNMLG-TITTMEHD---- 453
+ + S K + PG+TP + RR+L N +G T D
Sbjct: 428 KSRSPSEAIPKISKIK----PYSPGSTPFEHRGASADRRYLTMNNIGYTWVVQNKDTTDD 483
Query: 454 -------GYSHIEIDFHDTGRGPRVPSMTDYFGFTMASLNENGSVFANPCKGEKNMSTLM 506
G + I + F D TDY F +AS+N+ G + G +
Sbjct: 484 ATSGSGSGGNSITVSFFDRSLNTEY-HFTDYHNFDLASMNQRGVLLGTSSTGH-----IY 537
Query: 507 YRPFSSWANNSEWSMRFE---GEEVKAVAL-----GTAWVAAVTSLNFLRIFTEGG 554
YR + A N W + E + ++ + T + T+L +LR F + G
Sbjct: 538 YRSHNE-ATNDSWDRKLPLLVSEYITSICITNNASATNTIIVGTNLGYLRFFNQFG 592
Score = 45 (20.9 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
LV A+S E + I + P + P I D +T+L+ + + + + + + ++L
Sbjct: 25 LVIANS-EGLMKILNTNDPESQP-ISIDILDNLTSLSSHEDKSIVLT-TTEGKLELIDLS 81
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
+ + R LP+R F G+ + GD+ + +++
Sbjct: 82 TNTSKGVLYRSELPLRDTVFINQGNRVLCGGDENKLVIVD 121
Score = 37 (18.1 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 111 FNKSGSMLAAAGDDEGIKLINTID 134
FN S L A + +K++NT D
Sbjct: 18 FNHSIGKLVIANSEGLMKILNTND 41
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 198 (74.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 65/243 (26%), Positives = 112/243 (46%)
Query: 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88
A++ + + SS ++ + S L H V + SP+S L S S D + +L+
Sbjct: 648 ANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGP-VYGCSFSPDSQYLLSCSEDTTARLW 706
Query: 89 KFPGGEFQTNITRF---TLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145
E +N+ + P+ ++F+ G A A D +L T S R+ GH
Sbjct: 707 SM---ETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHL 763
Query: 146 GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205
+ F PN YLA+ + + WE+Q+G K V +G + + +++SPD
Sbjct: 764 SDCNTVRFHPNINYLATGSNDKSARLWEIQTG------KCVRIFMGHR-APIYTVAFSPD 816
Query: 206 GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
G LA G V+++D T +K+ + G H + + L +S +G +A+ S D + +WD
Sbjct: 817 GRLLATAGEDTSVILWDLSTGKKVKKMDG-HTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Query: 266 VGK 268
V K
Sbjct: 876 VKK 878
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 72/261 (27%), Positives = 114/261 (43%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP----GGEFQTNITR--- 101
+PS+ +LR H V A +P S LASGS D + +++ GG Q +
Sbjct: 212 IPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 271
Query: 102 ---FTLP----IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154
+P + L +N +G++LA G +G I T DG++A L HKGP+ L ++
Sbjct: 272 EGGHDVPSNKDVTSLDWNTNGTLLAT-GSYDGFARIWTEDGNLASTLGQHKGPIFALKWN 330
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDIGSD-PSSMNVLSWSPDGETLAVP 212
Y+ S T I W+ +G AP + D ++M S S D + +
Sbjct: 331 RKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTD---MCI- 386
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI 272
V D K F +G H + + W P+G +A+ S D + IW + +++ I
Sbjct: 387 ----HVCRLGCDRPVKTF--QG-HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCI 439
Query: 273 -DRQKFDDRICCMAWKPIGNA 292
D Q + I + W P G A
Sbjct: 440 HDLQAHNKEIYTIKWSPTGPA 460
Score = 153 (58.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 55/237 (23%), Positives = 107/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + N T LA+GS D +++ G + + + PI L +N+ G+ + +AG
Sbjct: 283 VTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGV 341
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N + AS + + L R +
Sbjct: 342 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCRLGCDRPVKTF 400
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DPS M + S S D TL + +K +V ++D K +++++ P
Sbjct: 401 QGHTNEVNAIKWDPSGMLLASCSDD-MTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGP 459
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WD+ + + K + + +A+ P G LA
Sbjct: 460 A---TSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLA 513
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 57/268 (21%), Positives = 109/268 (40%)
Query: 8 LREA-HKCGNAASFCSILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVT 65
+RE H + S+ W+ L T S I D NL L H+ +
Sbjct: 270 IREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTED----GNLASTLGQHKGPIF 325
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125
AL + + S +D + ++ GE + + P + + ++ A+ D
Sbjct: 326 ALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNMTFASCSTDM 384
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
I + + +GH V + +DP+ LAS T+ W ++ +H+L+
Sbjct: 385 CIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA 444
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHV 237
+I + + WSP G + P + D+ +L+ + RG H
Sbjct: 445 HNKEIYT-------IKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQ 497
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWD 265
+P+ +++SP+G+Y+A+ S D+ + IW+
Sbjct: 498 EPVYSVAFSPDGRYLASGSFDKCVHIWN 525
Score = 132 (51.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 33 VTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
+T +S T + IH L + P K + H + V A+ P+ LAS S D ++K++
Sbjct: 375 MTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 434
Query: 92 GG----EFQT-NITRFTL---PIRVLAFN-KSGSMLAAAGDDEGIKLINTIDGSIARVLK 142
+ Q N +T+ P N S MLA+A D ++L + G L
Sbjct: 435 QEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLT 494
Query: 143 GHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
H+ PV +AF P+ YLAS V W QSG +H+ +
Sbjct: 495 KHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYR 536
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 64/228 (28%), Positives = 103/228 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H V + LS + SGS D ++L+ GE T + +AF+
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLK---GHKGPVTGLAFDPNS--EYLASIDSIGTVIY 171
+ +A D IKL NT+ G + GHK V+ + F PN+ + S TV
Sbjct: 119 QIVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W LQ+ + ++L +G +N ++ SPDG A G ++++D +KL+S
Sbjct: 178 WNLQNCKLRNSL------VGHS-GYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYS 230
Query: 232 LR-GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278
L G + +CF SPN +Y ++ + I IWD+ K ++ K D
Sbjct: 231 LEAGSIIHSLCF---SPN-RYWLCAATENSIRIWDLESKSVVEDLKVD 274
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 55/228 (24%), Positives = 93/228 (40%)
Query: 53 LPKILRHHRDGVTALALS-PNSTCLASGSIDHSVKLYKFPG-----GEFQTNITRFTLPI 106
L I+R H D VTA+A NS + + S D S+ L+K G Q +T + +
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 107 RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI 166
+ + G + D ++L + G R GH V +AF ++ + S
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 167 GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG--ETLAVPGLKNDVVMYDRD 224
T+ W L K + ++ + +SP+ T+ V +++
Sbjct: 127 RTIKLWNT-----LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 225 TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKL 270
+ SL G H + ++ SP+G A+ D IL+WD+ GKKL
Sbjct: 182 NCKLRNSLVG-HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 198 (74.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 67/285 (23%), Positives = 125/285 (43%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ + ++ T+ + L +I + H D V A S + +A+ S+D VK++
Sbjct: 630 IASCGADKTLQVFKAETGEKLLEI-KAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVT 688
Query: 93 GEFQTNITRFTLPIRVLAF-NKSGSMLAAAGD-DEGIKLINTIDGSIARVLKGHKGPVTG 150
GE + + + F N S +L A G D +KL + + GH V+
Sbjct: 689 GELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSH 748
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELH--NLKRVAPDIGSDPSSMNVL----SWSP 204
F P+ + LAS + GT+ W+++S E N+K+ + M V+ SWS
Sbjct: 749 CRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSA 808
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-I 263
DG +L V KN V++++ T L + H I + +SP+ ++A +L + + +
Sbjct: 809 DGASLVVAA-KNKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSPSN-HLAVVALSQYCVEL 866
Query: 264 WDVGKKLDI-DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
W++ L + D + + C + P G++ +WE+
Sbjct: 867 WNMDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWET 911
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 58/257 (22%), Positives = 120/257 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S ++ + L T SS++ T+ I + + + + L H+ GV A S +S
Sbjct: 77 GHTKSISAVKFSPCGKFLGT-SSADKTVKIWN-MSDLSCERTLTGHKLGVNDFAWSADSK 134
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
+ + S D ++K+Y+ P + + T + FN S++ + DE +++ +
Sbjct: 135 SIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT 194
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
G + L H PV+ ++F+ + + S G V W+ +G+ +K + D +P
Sbjct: 195 GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ---CVKTLVDD--ENP 249
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC-FLSWS-PNGKYM 252
+ + +SP+G+ + L N + ++D + L +G C F ++S GK++
Sbjct: 250 P-VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWI 308
Query: 253 ATSSLDRQILIWDVGKK 269
+ S D +I +W++ K
Sbjct: 309 ISGSEDCKIYVWNLQTK 325
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 195 (73.7 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 66/247 (26%), Positives = 105/247 (42%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ S + I D S L KIL H V + SP+ L S S D +V+L+
Sbjct: 495 LIDKESDDVLERIMDEKTASEL-KILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQ 553
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
P+ F+ G + G D +L T R+ GH VT
Sbjct: 554 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT 613
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PNS Y+A+ + TV W++ +G N R+ ++ L++SP+G LA
Sbjct: 614 RFHPNSNYIATGSADRTVRLWDVLNG----NCVRI---FTGHKGPIHSLAFSPNGRFLAT 666
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL- 270
V+++D + L+G H I L +S +G+ +A+ S+D + +WD K
Sbjct: 667 GATDGRVLLWDIGHGLMVGELKG-HTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFE 725
Query: 271 DIDRQKF 277
D++ F
Sbjct: 726 DLETDDF 732
Score = 171 (65.3 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 68/275 (24%), Positives = 121/275 (44%)
Query: 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAG 122
G+TA+ ++ +S+ + G D +V+++ + ++ ++ A S++
Sbjct: 452 GLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRS--------VKAAA---DLSLIDKES 500
Query: 123 DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN 182
DD ++++ S ++L GH GPV G +F P+ YL S GTV W LQ+ L
Sbjct: 501 DDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVG 560
Query: 183 LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICF 242
K G + + +SP G G ++ D + L G H+ +
Sbjct: 561 YK------GHNYPVWDT-QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG-HLADVTC 612
Query: 243 LSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMG 300
+ PN Y+AT S DR + +WDV G + I I +A+ P G LA G
Sbjct: 613 TRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGH-KGPIHSLAFSPNGRFLATGATDG 671
Query: 301 KYGVWE---SVVPSSMKSPTEDIPSSRSNYNGLLL 332
+ +W+ ++ +K T+ I + R + +G +L
Sbjct: 672 RVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEIL 706
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 63/225 (28%), Positives = 100/225 (44%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H V + LS + SGS D ++L+ GE T + +AF+ +
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 120 AAGDDEGIKLINTIDGSIARVLK---GHKGPVTGLAFDPNS--EYLASIDSIGTVIYWEL 174
+A D IKL NT+ G + GHK V+ + F PN+ + S TV W L
Sbjct: 122 SASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR- 233
Q+ + L N + +N ++ SPDG A G ++++D +KL+SL
Sbjct: 181 QNCK-LRNT------LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278
G + +CF SPN +Y ++ + I IWD+ K ++ K D
Sbjct: 234 GSIIHSLCF---SPN-RYWLCAATENSIRIWDLESKSVVEDLKVD 274
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 52/233 (22%), Positives = 108/233 (46%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP---IRVLAF 111
+ + H +D V ++A S ++ + S S D ++KL+ G E + I+ + + F
Sbjct: 100 RFVGHTKD-VLSVAFSTDNRQIVSASRDRTIKLWNTLG-ECKYTISEADGHKEWVSCVRF 157
Query: 112 NKSGSM--LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
+ + + + +A D+ +K+ N + + L GH G + +A P+ AS G +
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVI 217
Query: 170 IYWELQSGRELHNLKR--VAPDIGSDPSSM--------NVLSWSPDGETLAVPGLKNDVV 219
+ W+L G++L++L+ + + P+ ++ W + +++ V LK D+
Sbjct: 218 LLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSV-VEDLKVDL- 275
Query: 220 MYDRDTAEKLFSLRG--DHVQPI-CF-LSWSPNGKYMATSSLDRQILIWDVGK 268
+ AEK G + + I C L+WS +G + + D I +W +G+
Sbjct: 276 ---KAEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGIGR 325
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 188 (71.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 53/234 (22%), Positives = 108/234 (46%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ + S + T+ I P + + R H V ++ + + S D ++K++
Sbjct: 105 HLLASGSRDKTVRIWVPNIKGE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+F ++++ +R F+ G ++ +A DD+ +KL + H G VT
Sbjct: 164 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 223
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ TV W++++ R L + + + S +++N LS+ P G L
Sbjct: 224 VDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ-----LHS--AAVNALSFHPSGNYLV 276
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G+Y A+ D Q+++W
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHG-HQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 176 (67.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 57/208 (27%), Positives = 94/208 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSML 118
H+D VT + SP+ LASGS D +V+++ P + ++ + R T +R + F G
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSF 149
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A DD+ IK+ +T L H V F P+ + S TV W+ S
Sbjct: 150 VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 209
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+H+ + G + + + P G +A G+ N V ++D T +L H
Sbjct: 210 CVHSYC----EHGG---FVTYVDFHPSGTCVAAAGMDNTVKVWDVRT-HRLLQHYQLHSA 261
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDV 266
+ LS+ P+G Y+ T+S D + I D+
Sbjct: 262 AVNALSFHPSGNYLVTASSDSTLKILDL 289
Score = 173 (66.0 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H VT + P+ TC+A+ +D++VK++
Sbjct: 190 LIVSASDDKTVKLWDKTSRECVHSYCEHG-GFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 248
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + L+F+ SG+ L A D +K+++ ++G + L GH+GP T +
Sbjct: 249 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 308
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF EY AS S V+ W+
Sbjct: 309 AFSRTGEYFASGGSDEQVMVWK 330
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/250 (22%), Positives = 108/250 (43%)
Query: 49 LPSNLPKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP 105
LP P + RH HRD VT + S N LASGS+D + ++ T
Sbjct: 35 LPQEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 94
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID 164
+ + F+ SG +LA+ D+ +++ + I G + V + H V + F + + +
Sbjct: 95 VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGE-STVFRAHTATVRSVHFCSDGQSFVTAS 153
Query: 165 SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRD 224
T+ W + L +L + + + +SPDG + V ++D+
Sbjct: 154 DDKTIKVWSTHRQKFLFSLSQHI-------NWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 225 TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICC 283
+ E + S +H + ++ + P+G +A + +D + +WDV +L Q +
Sbjct: 207 SRECVHSYC-EHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 265
Query: 284 MAWKPIGNAL 293
+++ P GN L
Sbjct: 266 LSFHPSGNYL 275
Score = 128 (50.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 52/184 (28%), Positives = 80/184 (43%)
Query: 1 MKVRSVKLREAHKCG-NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
+K S R AH + FCS D Q+ VTAS +T I + L L
Sbjct: 123 IKGESTVFR-AHTATVRSVHFCS---DGQS--FVTASDDKT-IKVWSTHRQKFLFS-LSQ 174
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H + V SP+ + S S D +VKL+ E + + + F+ SG+ +A
Sbjct: 175 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVA 234
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AAG D +K+ + + + + H V L+F P+ YL + S T+ +L GR
Sbjct: 235 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRL 294
Query: 180 LHNL 183
L+ L
Sbjct: 295 LYTL 298
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 185 (70.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 57/198 (28%), Positives = 106/198 (53%)
Query: 73 STCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLI 130
S + +GS+D VK++K+ E Q + L + + +++G++ A++ D I+L
Sbjct: 32 SETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLW 91
Query: 131 NTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
+ G + + GPV +AF P+S+Y+A+ +G V + ++SG++ H+L
Sbjct: 92 DLETGKQIKSMDA--GPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGK 149
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
I S +++SPDG+ LA + + ++D T + L +L G H PI L++SP+
Sbjct: 150 FILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG-HAMPIRSLTFSPD 201
Query: 249 GKYMATSSLDRQILIWDV 266
+ + T+S D I I+DV
Sbjct: 202 SQLLVTASDDGYIKIYDV 219
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 55/239 (23%), Positives = 108/239 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S N AS S+D ++L+ G+ ++ + +AF+
Sbjct: 60 LEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSK 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+A + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 YIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD--DRICCMAWKPIGNAL 293
+ +++SP+ + +SS D+ I +WD + ++ FD D++ + + P G+ +
Sbjct: 232 GSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF-FDHQDQVWSVKYNPTGSKI 289
Score = 147 (56.8 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 48/200 (24%), Positives = 91/200 (45%)
Query: 67 LALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDE 125
+A SP+S +A+GS V ++ G+ + ++ TR I +A++ G LA+ D
Sbjct: 112 VAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKF-ILSIAYSPDGKYLASGAIDG 170
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
I + + G + L+GH P+ L F P+S+ L + G + +++Q NL
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NLAG 226
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSW 245
GS S+ ++SPD + ++D ++ + DH + + +
Sbjct: 227 TLSGHGSWVLSV---AFSPDDTHFVSSSSDKSIKVWDT-SSRSCVNTFFDHQDQVWSVKY 282
Query: 246 SPNGKYMATSSLDRQILIWD 265
+P G + ++ DR I I+D
Sbjct: 283 NPTGSKIVSAGDDRAIHIYD 302
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 189 (71.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 54/234 (23%), Positives = 108/234 (46%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ + S + T+ I P + + R H V ++ + + S D +VK++
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+F ++++ +R F+ G ++ +A DD+ +KL + H G VT
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ TV W++++ R L + + + S +++N LS+ P G L
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ-----LHS--AAVNALSFHPSGNYLV 245
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G+Y A+ D Q+++W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHG-HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 64/258 (24%), Positives = 109/258 (42%)
Query: 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALAL 69
E H G+ + S+ + L + S + H + P H+D VT +
Sbjct: 12 ERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWH--MKPQTRAYRFAGHKDAVTCVNF 69
Query: 70 SPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIK 128
SP+ LASGS D +V+++ P + ++ + R T +R + F G A DD+ +K
Sbjct: 70 SPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
+ +T L H V F P+ + S TV W+ S +H+
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC---- 184
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+ G + + + P G +A G+ N V ++D T +L H + LS+ P+
Sbjct: 185 EHGG---FVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-HRLLQHYQLHSAAVNALSFHPS 240
Query: 249 GKYMATSSLDRQILIWDV 266
G Y+ T+S D + I D+
Sbjct: 241 GNYLVTASSDSTLKILDL 258
Score = 175 (66.7 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 47/183 (25%), Positives = 85/183 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H VT + P+ TC+A+ +D++VK++
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + L+F+ SG+ L A D +K+++ ++G + L GH+GP T +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR-ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
AF EY AS S V+ W+ + + RV + SS L P+ + L
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWKSNFDIVDYGEVLRVQRPPATRASSSGTL---PEVDPLV 334
Query: 211 VPG 213
PG
Sbjct: 335 PPG 337
Score = 169 (64.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 60/257 (23%), Positives = 116/257 (45%)
Query: 42 ISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR 101
++ H P PS L + + HRD VT++ S N+ LASGS+D + ++ QT R
Sbjct: 1 MTAHCPEDPS-LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKP---QTRAYR 56
Query: 102 FTL---PIRVLAFNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNS 157
F + + F+ SG +LA+ D+ +++ + + G + V + H V + F +
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDG 115
Query: 158 EYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKND 217
+ + TV W + L +L + + + +SPDG +
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHI-------NWVRCAKFSPDGRLIVSASDDKT 168
Query: 218 VVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQK 276
V ++D+ + E + S +H + ++ + P+G +A + +D + +WDV +L Q
Sbjct: 169 VKLWDKTSRECVHSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 227
Query: 277 FDDRICCMAWKPIGNAL 293
+ +++ P GN L
Sbjct: 228 HSAAVNALSFHPSGNYL 244
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 51/184 (27%), Positives = 80/184 (43%)
Query: 1 MKVRSVKLREAHKCG-NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
+K S R AH + FCS D Q+ VTAS +T + + L L
Sbjct: 92 VKGESTVFR-AHTATVRSVHFCS---DGQS--FVTASDDKT-VKVWSTHRQKFLFS-LSQ 143
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H + V SP+ + S S D +VKL+ E + + + F+ SG+ +A
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AAG D +K+ + + + + H V L+F P+ YL + S T+ +L GR
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRL 263
Query: 180 LHNL 183
L+ L
Sbjct: 264 LYTL 267
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 185 (70.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 70/257 (27%), Positives = 115/257 (44%)
Query: 51 SNLPKILRHHRDGVTALALSPNS----TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPI 106
+ L I H D V A P + L +GS+D +VKL++ + T +L +
Sbjct: 4 AGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGV 63
Query: 107 RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-S 165
LA + SG + A++ D +++ + + VL+ V G+ F+P LA S
Sbjct: 64 AALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGS 123
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIG--SDPSSMN--VLS--WSPDGETLAVPGLKNDVV 219
+V W+ S R + L PD SD +S VLS WSP+G+ LA + +
Sbjct: 124 SASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTIC 183
Query: 220 MYDRDTAEKLFSLRGDHVQPICFLSWSP-NGKYMATSSLDRQILIWDV-GKKLDIDRQKF 277
++D D ++ L L G H P+ L +SP + + + + S D + + D GK L
Sbjct: 184 VFDVDRSKLLHQLEG-HNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGH 242
Query: 278 DDRICCMAWKPIGNALA 294
+ + P G A+A
Sbjct: 243 TSWVLSVDASPDGGAIA 259
Score = 166 (63.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 85/313 (27%), Positives = 137/313 (43%)
Query: 1 MKVRSVK-LREAHKCGN-AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR 58
MK+ +K + AH+ AA++ D+ A L+T S ET + + P +L +
Sbjct: 1 MKLAGLKSIENAHEDSVWAATWVPATEDRPAL-LLTGSLDET-VKLWRPD-ELDLVRTNT 57
Query: 59 HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTL---PIRV--LAFNK 113
H GV ALA P+ AS SID V+++ + TN T L P V + F
Sbjct: 58 GHSLGVAALAAHPSGIIAASSSIDSFVRVF-----DVDTNATIAVLEAPPSEVWGMQFEP 112
Query: 114 SGSMLAAAGDDEG-IKLINTIDGSIARVLK-------------GHKGPVTGLAFDPNSEY 159
G++LA AG +KL +T + L K V +A+ PN +
Sbjct: 113 KGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKR 172
Query: 160 LASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVPGLKNDV 218
LA GT+ +++ + LH L+ G + + L +SP D L V
Sbjct: 173 LACGSMDGTICVFDVDRSKLLHQLE------GHN-MPVRSLVFSPVDPRVLFSGSDDGHV 225
Query: 219 VMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK-F 277
M+D + L S+ G H + + SP+G +AT S DR + +WD+ + I
Sbjct: 226 NMHDAEGKTLLGSMSG-HTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNH 284
Query: 278 DDRICCMAWKPIG 290
+D++ +A++P G
Sbjct: 285 NDQVWSVAFRPPG 297
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 61/215 (28%), Positives = 112/215 (52%)
Query: 60 HRDGVTALALSPN----STCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N S + SGS+D VK++K+ + Q + L + + +
Sbjct: 15 HDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+GS+ A++ D I+L + G + + GPV LAF P+S++LA+ +G V
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDA--GPVDAWSLAFSPDSQFLATGSHVGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ +++G++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVETGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 51/213 (23%), Positives = 95/213 (44%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S + AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 FLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269
+ +++ P+ + +SS D+ + +WD G +
Sbjct: 232 GSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTR 264
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/201 (24%), Positives = 92/201 (45%)
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDD 124
+LA SP+S LA+GS V ++ G+ + ++ TR I +A++ G LA+ D
Sbjct: 111 SLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAID 169
Query: 125 EGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
I + + G + L+GH P+ L F P+S+ L + G + +++Q NL
Sbjct: 170 GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NLA 225
Query: 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244
GS +NV ++ PD V ++D T + + DH + +
Sbjct: 226 GTLSGHGS--WVLNV-AFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFF-DHQDQVWGVK 281
Query: 245 WSPNGKYMATSSLDRQILIWD 265
++ +G + + D++I I+D
Sbjct: 282 YNGSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 61/215 (28%), Positives = 112/215 (52%)
Query: 60 HRDGVTALALSPN----STCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N S + SGS+D VK++K+ + Q + L + + +
Sbjct: 15 HDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+GS+ A++ D I+L + G + + GPV LAF P+S++LA+ +G V
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDA--GPVDAWSLAFSPDSQFLATGSHVGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ +++G++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVETGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 51/213 (23%), Positives = 95/213 (44%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S + AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 FLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269
+ +++ P+ + +SS D+ + +WD G +
Sbjct: 232 GSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTR 264
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/201 (24%), Positives = 92/201 (45%)
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDD 124
+LA SP+S LA+GS V ++ G+ + ++ TR I +A++ G LA+ D
Sbjct: 111 SLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAID 169
Query: 125 EGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
I + + G + L+GH P+ L F P+S+ L + G + +++Q NL
Sbjct: 170 GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NLA 225
Query: 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244
GS +NV ++ PD V ++D T + + DH + +
Sbjct: 226 GTLSGHGS--WVLNV-AFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFF-DHQDQVWGVK 281
Query: 245 WSPNGKYMATSSLDRQILIWD 265
++ +G + + D++I I+D
Sbjct: 282 YNGSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 195 (73.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
++ H D V A S + +A+ S+D VK++ G + + F +
Sbjct: 661 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSH 720
Query: 117 --MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+LA A D +KL + + GH V F P+ + LAS + GT+ W++
Sbjct: 721 YLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDV 780
Query: 175 QSGRELH--NLKRVAPDIGSDPSSMNVL----SWSPDGETLAVPGLKNDVVMYDRDTAEK 228
+S E N+K+ + M V+ SWS DG + V KN + +++ D+ K
Sbjct: 781 KSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAA-KNKIFLWNMDSCLK 839
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
+ RG H+ + + +SP+G TSS D+ I +W+ K
Sbjct: 840 VADCRG-HLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKK 878
Score = 144 (55.7 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 62/272 (22%), Positives = 114/272 (41%)
Query: 52 NLPK-ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
NL + ++R H D V S + +AS +D +++++K GE I + A
Sbjct: 613 NLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCA 672
Query: 111 FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYL--ASIDSIGT 168
F+ +A D+ +K+ N++ G + V H V F NS YL A+ S
Sbjct: 673 FSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCF 732
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE- 227
+ W+L +E N G +S+N +SPD + LA + ++D +A
Sbjct: 733 LKLWDLNQ-KECRNTM-----FGHT-NSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE 785
Query: 228 ------KLFSLRGDHVQP-----ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI-DRQ 275
K F L + Q + SWS +G + ++ ++ I +W++ L + D +
Sbjct: 786 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK-IFLWNMDSCLKVADCR 844
Query: 276 KFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
+ C+ + P G++ +WE+
Sbjct: 845 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 876
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 193 (73.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 46/146 (31%), Positives = 77/146 (52%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ + S + T+ + DP S L + L H V ++A SP+ LASGS D +V+L+
Sbjct: 709 VLASGSDDETVRLWDPATGS-LQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G Q + + +R +AF+ G +LA+ D+ ++L + GS+ + L+GH V +
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSV 827
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSG 177
AF P+ LAS TV W+ +G
Sbjct: 828 AFSPDGRLLASGSFDKTVRLWDPATG 853
Score = 184 (69.8 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 47/154 (30%), Positives = 80/154 (51%)
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
N ++LA+ DDE ++L + GS+ + L+GH G V +AF P+ LAS TV
Sbjct: 704 NSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRL 763
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W+ +G L+ + + S +++SPDG LA V ++D T +
Sbjct: 764 WDPATGSLQQTLRGHSNWVRS-------VAFSPDGRLLASGSFDKTVRLWDPATGSLQQT 816
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
LRG H + +++SP+G+ +A+ S D+ + +WD
Sbjct: 817 LRG-HSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 174 (66.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 52/178 (29%), Positives = 94/178 (52%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ + S + T+ + DP S L + LR H + V ++A SP+ LASGS D +V+L+
Sbjct: 751 LLASGSFDKTVRLWDPATGS-LQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPA 809
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G Q + + +R +AF+ G +LA+ D+ ++L + G++ + L KG VT L
Sbjct: 810 TGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLI-IKGTVTEL 868
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDI---GSDPSSMN--VLSWSP 204
F + Y+++ ++G++ + + G L + ++ DI G D S+N + W P
Sbjct: 869 QFSQDGSYIST--NLGSLNI-QSRCGNNLSSSPKMHSDILINGPDWISVNGREVLWLP 923
Score = 168 (64.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 59/214 (27%), Positives = 100/214 (46%)
Query: 49 LPS---NLPKILRHHRDGVTALALSPNST--CLASGSIDHSVKLYKFPGGEFQTNITRFT 103
LPS LPK+ + L NS LASGS D +V+L+ G Q + +
Sbjct: 678 LPSWICQLPKVNEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHS 737
Query: 104 LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI 163
+ +AF+ G +LA+ D+ ++L + GS+ + L+GH V +AF P+ LAS
Sbjct: 738 GWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASG 797
Query: 164 DSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD- 222
TV W+ +G L+ + + S +++SPDG LA V ++D
Sbjct: 798 SFDKTVRLWDPATGSLQQTLRGHSDTVRS-------VAFSPDGRLLASGSFDKTVRLWDP 850
Query: 223 -RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATS 255
T ++ ++G + L +S +G Y++T+
Sbjct: 851 ATGTLQQTLIIKGTVTE----LQFSQDGSYISTN 880
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 188 (71.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 53/235 (22%), Positives = 110/235 (46%)
Query: 49 LPSNLPKILRHHR---DGVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTL 104
+P P++ H G+ AL L P+ T + +G D +V ++ + + +
Sbjct: 207 VPGRSPRMWGLHSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSK 266
Query: 105 PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID 164
+ + F+ S ++ +A D I++ + + S +V++ H+G VTGL+ +YL S
Sbjct: 267 KVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSS 326
Query: 165 SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRD 224
+ ++Q+GR L +V + S ++ + PDG + + + ++D
Sbjct: 327 DDQYWAFSDIQTGRVL---TKVTDE--SSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLK 381
Query: 225 TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+ + G H PI +++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 382 ERTNVANFPG-HSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 435
Score = 48 (22.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 417 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 459
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 208 (78.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 66/261 (25%), Positives = 118/261 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF-NKSG 115
++ H D V A S + + +A+ S+D VK++ G+ + + F NKS
Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSN 712
Query: 116 SMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+L A G +D +KL + + GH VT F P+ E LAS + GT+ W++
Sbjct: 713 HLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDV 772
Query: 175 QSGRELH--NLKRVAPDIGSDPSSMNVL----SWSPDGETLAVPGLKNDVVMYDRDTAEK 228
+S E N+KR P + V+ SWS DG+ + V KN V++ D T+
Sbjct: 773 RSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAA-KNKVLLLDIHTSGL 831
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-IWDVGKKLDI-DRQKFDDRICCMAW 286
L + H I + +SP ++A +L + + +W++ ++ + D + + + +
Sbjct: 832 LTEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMF 890
Query: 287 KPIGNALAVIDVMGKYGVWES 307
P G++ VWE+
Sbjct: 891 SPDGSSFLTASDDQTIRVWET 911
Score = 38 (18.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 16 NAASFCSILWDQQAHHLVTASSSE 39
N SFC L D Q L + S+
Sbjct: 429 NGKSFCYYLHDLQVDFLTEKNRSQ 452
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 189 (71.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 50/157 (31%), Positives = 79/157 (50%)
Query: 24 LWDQQA--HHLVTASSS-ETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASG 79
+WD H L AS+S + T + P +I H V + PNS LA+G
Sbjct: 383 VWDLDISPHSLYFASASHDRTARLWS--FDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 440
Query: 80 SIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIAR 139
S D +V+L+ G T P+ LAF+ +G LA+AG+D+ +KL + G++ +
Sbjct: 441 STDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYK 500
Query: 140 VLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
L+GH +T L F P+S +AS +V W+++S
Sbjct: 501 ELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRS 537
Score = 180 (68.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 51/164 (31%), Positives = 80/164 (48%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKSGSML 118
H V L +SP+S AS S D + +L+ F + I L + + F+ + + L
Sbjct: 379 HAYPVWDLDISPHSLYFASASHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYL 437
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A D+ ++L +T G+ R+ GH+GPV LAF PN +YLAS + W+L SG
Sbjct: 438 ATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 497
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
L+ +I S L++SPD +A + N V ++D
Sbjct: 498 LYKELRGHTDNITS-------LTFSPDSSLVASASMDNSVRVWD 534
Score = 142 (55.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 53/222 (23%), Positives = 93/222 (41%)
Query: 105 PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL--KGHKGPVTGLAFDPNSEYLAS 162
P+ F S L + +D I+ + GS + +GH PV L P+S Y AS
Sbjct: 340 PVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPHSLYFAS 397
Query: 163 IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
T W + L+ A + + ++ + + P+ LA V ++
Sbjct: 398 ASHDRTARLWSFD---RTYPLRIYAGHL----ADVDCVKFHPNSNYLATGSTDKTVRLWS 450
Query: 223 RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRI 281
+ G H P+ L++SPNGKY+A++ D+++ +WD+ L + + D I
Sbjct: 451 TQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 509
Query: 282 CCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTEDIPSS 323
+ + P + +A + VW+ + SS S D SS
Sbjct: 510 TSLTFSPDSSLVASASMDNSVRVWD--IRSSHCSTPADGSSS 549
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 185 (70.2 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 74/264 (28%), Positives = 117/264 (44%)
Query: 71 PNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGI 127
P+ +CL A+G D +K+++ G N++ +R L+F SGS+ L +A D+ +
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTL 178
Query: 128 KL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 179 RIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE- 236
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP------ 239
G SS+ +SPD L +V+M+D T E+L SL V P
Sbjct: 237 -----GHQ-SSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSD 290
Query: 240 --------ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN 291
+CF SP G Y+AT + DR + IW + K I + +CC + P G
Sbjct: 291 VHISSLRSVCF---SPEGLYLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFF-PHGG 346
Query: 292 ALAVIDVMGKYGVWESV-VPSSMK 314
+A G W + V SS+K
Sbjct: 347 VIATGTRDGHVQFWTAPRVLSSLK 370
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/221 (23%), Positives = 96/221 (43%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +P+ S L S S D +++++ Q + L + + +
Sbjct: 149 LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 208
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + VI W+
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDP 268
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLS-----WSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G L +L D D S +++ S +SP+G LA + +D ++ K
Sbjct: 269 YTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLAT--VADDRLLRIWALELKT 326
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 327 PIAFAPMTNGLC-CTFFPHGGVIATGTRDGHVQFWTAPRVL 366
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 185 (70.2 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 72/261 (27%), Positives = 118/261 (45%)
Query: 71 PNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGI 127
P+ +CL A+G D +K+++ G N++ +R L+F SGS+ L +A D+ +
Sbjct: 119 PDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTL 178
Query: 128 KL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 179 RIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE- 236
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR----------GD 235
G SS+ +SPD L +V+M+D T E+L SL D
Sbjct: 237 -----GHQ-SSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSD 290
Query: 236 -HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALA 294
H+ + + +SP G Y+AT + DR + IW + K I + +CC + P G +A
Sbjct: 291 VHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFF-PHGGVIA 349
Query: 295 VIDVMGKYGVWESV-VPSSMK 314
G W + V SS+K
Sbjct: 350 TGTRDGHVQFWTAPRVLSSLK 370
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +P+ S L S S D +++++ Q + L + + +
Sbjct: 149 LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 208
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + VI W+
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDP 268
Query: 175 QSG---RELHNLKRVAPDIGSDP--SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G R LH+ + P SD SS+ + +SP+G LA + +D ++ K
Sbjct: 269 YTGERLRSLHHTQLSPPMDDSDVHISSLRSVCFSPEGLYLAT--VADDRLLRIWALELKT 326
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 327 PIAFAPMTNGLC-CTFFPHGGVIATGTRDGHVQFWTAPRVL 366
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 188 (71.2 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 71/261 (27%), Positives = 113/261 (43%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP----GGEFQTNITR--- 101
+PS+ +LR H V A +P S LASGS D + +++ GG Q +
Sbjct: 220 IPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 279
Query: 102 ---FTLP----IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154
+P + L +N +G++LA G +G I T DG++A L HKGP+ L ++
Sbjct: 280 EGGHDVPSNKDVTSLDWNTNGTLLAT-GSYDGFARIWTEDGNLASTLGQHKGPIFALKWN 338
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDIGSD-PSSMNVLSWSPDGETLAVP 212
Y+ S T I W+ +G AP + D ++ S S D + +
Sbjct: 339 RKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTD---MCI- 394
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI 272
V D K F +G H + + W P+G +A+ S D + IW + +++ I
Sbjct: 395 ----HVCRLGCDRPVKTF--QG-HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCI 447
Query: 273 -DRQKFDDRICCMAWKPIGNA 292
D Q + I + W P G A
Sbjct: 448 HDLQAHNKEIYTIKWSPTGPA 468
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 55/237 (23%), Positives = 108/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + N T LA+GS D +++ G + + + PI L +N+ G+ + +AG
Sbjct: 291 VTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGV 349
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + L R +
Sbjct: 350 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDRPVKTF 408
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DPS M + S S D TL + +K +V ++D K +++++ P
Sbjct: 409 QGHTNEVNAIKWDPSGMLLASCSDD-MTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGP 467
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WD+ + + K + + +A+ P G LA
Sbjct: 468 A---TSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLA 521
Score = 151 (58.2 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 58/268 (21%), Positives = 110/268 (41%)
Query: 8 LREA-HKCGNAASFCSILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVT 65
+RE H + S+ W+ L T S I D NL L H+ +
Sbjct: 278 IREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTED----GNLASTLGQHKGPIF 333
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125
AL + + S +D + ++ GE + + P + + ++ + A+ D
Sbjct: 334 ALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDM 392
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
I + + +GH V + +DP+ LAS T+ W ++ +H+L+
Sbjct: 393 CIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA 452
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHV 237
+I + + WSP G + P + D+ +L+ + RG H
Sbjct: 453 HNKEIYT-------IKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQ 505
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWD 265
+P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 506 EPVYSVAFSPDGKYLASGSFDKCVHIWN 533
Score = 132 (51.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 48/161 (29%), Positives = 73/161 (45%)
Query: 34 TASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
T +S T + IH L + P K + H + V A+ P+ LAS S D ++K++
Sbjct: 384 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 443
Query: 93 G----EFQT-NITRFTL---PIRVLAFN-KSGSMLAAAGDDEGIKLINTIDGSIARVLKG 143
+ Q N +T+ P N S MLA+A D ++L + G L
Sbjct: 444 EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTK 503
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
H+ PV +AF P+ +YLAS V W QSG +H+ +
Sbjct: 504 HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYR 544
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 185 (70.2 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 74/264 (28%), Positives = 117/264 (44%)
Query: 71 PNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGI 127
P+ +CL A+G D +K+++ G N++ +R L+F SGS+ L +A D+ +
Sbjct: 121 PDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTL 180
Query: 128 KL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 181 RIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE- 238
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP------ 239
G SS+ +SPD L +V+M+D T E+L SL V P
Sbjct: 239 -----GHQ-SSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSD 292
Query: 240 --------ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN 291
+CF SP G Y+AT + DR + IW + K I + +CC + P G
Sbjct: 293 VHISSLRSVCF---SPEGLYLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFF-PHGG 348
Query: 292 ALAVIDVMGKYGVWESV-VPSSMK 314
+A G W + V SS+K
Sbjct: 349 VIATGTRDGHVQFWTAPRVLSSLK 372
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/221 (23%), Positives = 96/221 (43%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +P+ S L S S D +++++ Q + L + + +
Sbjct: 151 LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 210
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + VI W+
Sbjct: 211 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDP 270
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLS-----WSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G L +L D D S +++ S +SP+G LA + +D ++ K
Sbjct: 271 YTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLAT--VADDRLLRIWALELKT 328
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 329 PIAFAPMTNGLC-CTFFPHGGVIATGTRDGHVQFWTAPRVL 368
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 185 (70.2 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 72/261 (27%), Positives = 118/261 (45%)
Query: 71 PNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGI 127
P+ +CL A+G D +K+++ G N++ +R L+F SGS+ L +A D+ +
Sbjct: 121 PDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTL 180
Query: 128 KL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 181 RIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE- 238
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR----------GD 235
G SS+ +SPD L +V+M+D T E+L SL D
Sbjct: 239 -----GHQ-SSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSD 292
Query: 236 -HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALA 294
H+ + + +SP G Y+AT + DR + IW + K I + +CC + P G +A
Sbjct: 293 VHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFF-PHGGVIA 351
Query: 295 VIDVMGKYGVWESV-VPSSMK 314
G W + V SS+K
Sbjct: 352 TGTRDGHVQFWTAPRVLSSLK 372
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +P+ S L S S D +++++ Q + L + + +
Sbjct: 151 LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 210
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + VI W+
Sbjct: 211 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDP 270
Query: 175 QSG---RELHNLKRVAPDIGSDP--SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G R LH+ + P SD SS+ + +SP+G LA + +D ++ K
Sbjct: 271 YTGERLRSLHHTQLNPPMDDSDVHISSLRSVCFSPEGLYLAT--VADDRLLRIWALELKT 328
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 329 PIAFAPMTNGLC-CTFFPHGGVIATGTRDGHVQFWTAPRVL 368
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 190 (71.9 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 62/224 (27%), Positives = 102/224 (45%)
Query: 45 HDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTL 104
H P N K++ H V ++ SP++ L S S D +V+L+ + T
Sbjct: 504 HKP--QENTRKLIGHSGP-VYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQ 560
Query: 105 PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID 164
P+ + F+ G A D+ +L T R+ GH V + F PNS Y+ +
Sbjct: 561 PVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGS 620
Query: 165 SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRD 224
S T W++ +G N RV +G +S+N L+ SPDG LA G + ++D
Sbjct: 621 SDKTCRMWDVHTG----NCVRVF--LGHT-NSVNCLAVSPDGRWLASGGEDGIICVWDIG 673
Query: 225 TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
+ +L S+RG + L++S +G + + D + +WDV K
Sbjct: 674 SGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKK 717
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 58/215 (26%), Positives = 89/215 (41%)
Query: 109 LAFNKSGSMLAAAGDDEGIKLINTIDGS-IARVLK--------------GHKGPVTGLAF 153
+ FN +++AA D IKL + +DG + VLK GH GPV G++F
Sbjct: 467 IEFNDDSTLVAAGFQDSYIKLWS-LDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSF 525
Query: 154 DPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG 213
P+++YL S TV W L + L + K G +V +SP G
Sbjct: 526 SPDNKYLLSCSEDKTVRLWSLDTYTALVSYK------GHTQPVWDV-KFSPLGHYFVTAS 578
Query: 214 LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLD 271
++ D L G H+ + + + PN Y+ T S D+ +WDV G +
Sbjct: 579 HDQTARLWATDHIYPLRIFAG-HINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVR 637
Query: 272 IDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE 306
+ + + C+A P G LA G VW+
Sbjct: 638 VFLGHTNS-VNCLAVSPDGRWLASGGEDGIICVWD 671
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 188 (71.2 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 67/250 (26%), Positives = 112/250 (44%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+ + +L T + I I D + + ++L H + +L S + L SGS
Sbjct: 351 SVAFSPDGKYLATGVEDQQ-IRIWD-IAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D +V L+ GE Q I + + F+ G +AA D+ I+ I T G++ L
Sbjct: 409 DRTVCLWDVEAGE-QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIR-IWTSSGTLVEQL 466
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS----GRELHNLKRVAPDI--GSDPS 195
GH+ V +AF P+ +YL S T+ WELQ ++ + G
Sbjct: 467 HGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDF 526
Query: 196 SMNVLSWSPDGETLAVPGLKNDVVMY-DRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
++V + SPDG+ + + G K+ + + D+ +L+G H + ++ SPNG AT
Sbjct: 527 ILSV-TVSPDGKWI-ISGSKDRTIQFWSPDSPHSQLTLQG-HNNSVISVAVSPNGHCFAT 583
Query: 255 SSLDRQILIW 264
S D + IW
Sbjct: 584 GSGDLRARIW 593
Score = 169 (64.5 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 44/163 (26%), Positives = 85/163 (52%)
Query: 104 LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI 163
L +R +AF+ G LA +D+ I++ + + R+L GH+ + L F + + L S
Sbjct: 347 LYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSG 406
Query: 164 DSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDR 223
TV W++++G + K + + +D V+ +SPDG+ +A L + V+
Sbjct: 407 SGDRTVCLWDVEAGEQ----KLI---LHTDDGVTTVM-FSPDGQFIAAGSL-DKVIRIWT 457
Query: 224 DTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ + L G H + + +++SP+GKY+ + SLD I +W++
Sbjct: 458 SSGTLVEQLHG-HEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 499
Score = 143 (55.4 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 59/243 (24%), Positives = 105/243 (43%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
V ++A SP+ LA+G D ++++ +T I L F+K G L +
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D + L + G +L G VT + F P+ +++A+ S+ VI SG + L
Sbjct: 409 DRTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFIAA-GSLDKVIRIWTSSGTLVEQL 466
Query: 184 KRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD----RDTAEKLFSLRG----- 234
G + S +V ++SPDG+ L L N + +++ + A ++ G
Sbjct: 467 H------GHEESVYSV-AFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQT 519
Query: 235 --DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK-LDIDRQKFDDRICCMAWKPIGN 291
H I ++ SP+GK++ + S DR I W + Q ++ + +A P G+
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGH 579
Query: 292 ALA 294
A
Sbjct: 580 CFA 582
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 185 (70.2 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 74/264 (28%), Positives = 117/264 (44%)
Query: 71 PNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGI 127
P+ +CL A+G D +K+++ G N++ +R L+F SGS+ L +A D+ +
Sbjct: 136 PDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTL 195
Query: 128 KL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 196 RIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE- 253
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP------ 239
G SS+ +SPD L +V+M+D T E+L SL V P
Sbjct: 254 -----GHQ-SSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSD 307
Query: 240 --------ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN 291
+CF SP G Y+AT + DR + IW + K I + +CC + P G
Sbjct: 308 VHISSLRSVCF---SPEGLYLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFF-PHGG 363
Query: 292 ALAVIDVMGKYGVWESV-VPSSMK 314
+A G W + V SS+K
Sbjct: 364 VIATGTRDGHVQFWTAPRVLSSLK 387
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/221 (23%), Positives = 96/221 (43%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +P+ S L S S D +++++ Q + L + + +
Sbjct: 166 LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 225
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + VI W+
Sbjct: 226 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDP 285
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLS-----WSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G L +L D D S +++ S +SP+G LA + +D ++ K
Sbjct: 286 YTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLAT--VADDRLLRIWALELKT 343
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 344 PIAFAPMTNGLC-CTFFPHGGVIATGTRDGHVQFWTAPRVL 383
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 181 (68.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 67/262 (25%), Positives = 126/262 (48%)
Query: 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLAS 78
S C++ +D +H+ ++AS +T I + D + + H D V ++++SP++ + S
Sbjct: 67 SDCALSFD--SHYALSASWDKT-IRLWDLEKGECTHQFVGHTSD-VLSVSISPDNRQVVS 122
Query: 79 GSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDG 135
GS D ++K++ G ++ + + + F N +AG D+ +K+ +
Sbjct: 123 GSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETF 182
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPS 195
S+ GH G V+ + P+ AS GT++ W+L L++L+ A
Sbjct: 183 SLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKA-------- 234
Query: 196 SMNVLSWSPDGETL-AVPGLKNDVVMYDRDTAEKLFSLRGDHV-------QPICF-LSWS 246
++N L +SP+ L A G + + ++D +T EK+ L D V +P C L+WS
Sbjct: 235 NINALVFSPNRYWLCAATG--SSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWS 292
Query: 247 PNGKYMATSSLDRQILIWDVGK 268
P+G+ + + D I +W V K
Sbjct: 293 PDGQTLFSGWTDNLIRVWQVTK 314
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 62/251 (24%), Positives = 107/251 (42%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H V+ ALS +S S S D +++L+ GE T + ++ +
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNR 118
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKG-HKGPVTGLAFDPNSEYLASIDSIG---TVIYW 172
+ + D+ IK+ N I + G H V+ + F PN + L + S G V W
Sbjct: 119 QVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFV-SAGWDKAVKVW 177
Query: 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
+L E +L+ G ++ ++ SPDG A G ++++D + + L+SL
Sbjct: 178 DL----ETFSLR--TSHYGHT-GYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSL 230
Query: 233 RGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG--KKLD---ID----RQKFDDRICC 283
I L +SPN +Y ++ I I+D+ +K+D +D +K + C
Sbjct: 231 EAK--ANINALVFSPN-RYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECI 287
Query: 284 -MAWKPIGNAL 293
+ W P G L
Sbjct: 288 SLTWSPDGQTL 298
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 183 (69.5 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 54/234 (23%), Positives = 108/234 (46%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ + S + T+ I P + + R H V ++ + + S D +VK++
Sbjct: 36 HLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 94
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+F ++++ +R F+ G ++ +A DD+ +KL + H G VT
Sbjct: 95 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY 154
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ TV W++++ R L + + + S +++N LS+ P G L
Sbjct: 155 VDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ-----LHS--AAVNGLSFHPSGNYLI 207
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G+Y A+ D Q+++W
Sbjct: 208 TASSDSTLKILDLMEGRLLYTLHG-HQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 174 (66.3 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 58/209 (27%), Positives = 96/209 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSML 118
H+D VT + SP+ LASGS D +V+++ P + ++ + R T +R + F G
Sbjct: 22 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A DD+ +K+ T L H V F P+ + S TV W+ +S R
Sbjct: 81 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSR 139
Query: 179 E-LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
E +H+ + G + + + P G +A G+ N V ++D T +L H
Sbjct: 140 ECVHSYC----EHGG---FVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-HRLLQHYQLHS 191
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ LS+ P+G Y+ T+S D + I D+
Sbjct: 192 AAVNGLSFHPSGNYLITASSDSTLKILDL 220
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H VT + P+ TC+A+ +D++VK++
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + L+F+ SG+ L A D +K+++ ++G + L GH+GP T +
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 239
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF EY AS S V+ W+
Sbjct: 240 AFSRTGEYFASGGSDEQVMVWK 261
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 1 MKVRSVKLREAHKCG-NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
+K S R AH + FCS D Q+ VTAS +T + + L L
Sbjct: 54 VKGESTVFR-AHTATVRSVHFCS---DGQS--FVTASDDKT-VKVWATHRQKFLFS-LSQ 105
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H + V SP+ + S S D +VKL+ E + + + F+ SG+ +A
Sbjct: 106 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 165
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AAG D +K+ + + + + H V GL+F P+ YL + S T+ +L GR
Sbjct: 166 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL 225
Query: 180 LHNL 183
L+ L
Sbjct: 226 LYTL 229
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 181 (68.8 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 51/234 (21%), Positives = 106/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HLV + S + T+ + P + + + H V ++ S + L + S D ++K++
Sbjct: 75 HLVASGSRDKTVCLWVPSVKGE-STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTV 133
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+F ++++ +R F+ G ++A+A DD+ +KL + H G
Sbjct: 134 HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANH 193
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ + TV W+++ R L + + +++N LS+ P G L
Sbjct: 194 VEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQ-------VHTAAVNSLSFHPSGNYLI 246
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G + A+ D Q+++W
Sbjct: 247 TASNDSTLKILDLLEGRLLYTLHG-HQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 165 (63.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 64/258 (24%), Positives = 108/258 (41%)
Query: 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALAL 69
E H G+ + S+ + L + S ++ + I + P L H+D V +
Sbjct: 13 ERHFRGHRDAITSVDFSLNKKQLASGSM-DSCLKIWS-MKPQMRAYCLVGHKDAVMCVQF 70
Query: 70 SPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIK 128
SP+ +ASGS D +V L+ P + ++ + + T +R + F+ G L A DD+ IK
Sbjct: 71 SPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIK 129
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
+ L H V F P+ +AS TV W+ S +H+
Sbjct: 130 VWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFC---- 185
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+ G N + + P G +A G V ++D +L H + LS+ P+
Sbjct: 186 EHGG---FANHVEFHPSGTCIAAAGTDKTVKVWDV-RMNRLLQHYQVHTAAVNSLSFHPS 241
Query: 249 GKYMATSSLDRQILIWDV 266
G Y+ T+S D + I D+
Sbjct: 242 GNYLITASNDSTLKILDL 259
Score = 164 (62.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 57/246 (23%), Positives = 110/246 (44%)
Query: 50 PSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVL 109
PS L + R HRD +T++ S N LASGS+D +K++ + + +
Sbjct: 10 PS-LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCV 68
Query: 110 AFNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168
F+ SG ++A+ D+ + L + ++ G + V K H V + F + + L + T
Sbjct: 69 QFSPSGHLVASGSRDKTVCLWVPSVKGE-STVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228
+ W + + L +L + + + +SPDG +A V ++D+ + E
Sbjct: 128 IKVWTVHRQKFLFSLSQHI-------NWVRCARFSPDGRLIASASDDKTVKLWDKTSREC 180
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQKFDDRICCMAWK 287
+ S +H + + P+G +A + D+ + +WDV +L Q + +++
Sbjct: 181 IHSFC-EHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFH 239
Query: 288 PIGNAL 293
P GN L
Sbjct: 240 PSGNYL 245
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/142 (24%), Positives = 68/142 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H + P+ TC+A+ D +VK++
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHG-GFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ T + L+F+ SG+ L A +D +K+++ ++G + L GH+GP T +
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCV 278
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF ++ AS S V+ W+
Sbjct: 279 AFSRTGDFFASGGSDEQVMVWK 300
Score = 130 (50.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 49/181 (27%), Positives = 79/181 (43%)
Query: 3 VRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRD 62
V SVK + A+ S+ + LVTAS +T I + L L H +
Sbjct: 90 VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT-IKVWTVHRQKFLFS-LSQHIN 147
Query: 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAG 122
V SP+ +AS S D +VKL+ E + + F+ SG+ +AAAG
Sbjct: 148 WVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAG 207
Query: 123 DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN 182
D+ +K+ + + + + H V L+F P+ YL + + T+ +L GR L+
Sbjct: 208 TDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYT 267
Query: 183 L 183
L
Sbjct: 268 L 268
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 186 (70.5 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 72/283 (25%), Positives = 115/283 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + S I D +P N +LR H V A +P S LASGS D +
Sbjct: 145 EENGAHEINNHSKPMEID-RDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTA 203
Query: 86 KLYKFP----GGEFQTNITR------FTLP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ GG Q + +P + L +N G++LA G +G I
Sbjct: 204 RIWNLNENSNGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNSDGTLLAM-GSYDGFARIW 262
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T +G++A L HKGP+ L ++ Y+ S T I W+ +G AP +
Sbjct: 263 TENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 322
Query: 191 GSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGK 250
D N +++ G + + V D K F +G H + + W P+G
Sbjct: 323 --DVDWQNNTTFASCGTDMCI-----HVCRLGCDLPVKTF--QG-HTNEVNAIKWDPSGM 372
Query: 251 YMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNA 292
+A+ S D + IW + + + D Q I + W P G A
Sbjct: 373 LLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 415
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/222 (21%), Positives = 98/222 (44%)
Query: 52 NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF 111
NL L H+ + AL + + S +D + ++ GE + + P + +
Sbjct: 267 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 326
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
++ + A+ G D I + + +GH V + +DP+ LAS T+
Sbjct: 327 -QNNTTFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 385
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W ++ +H+L+ + +I + + WSP G + P + D+ +L+
Sbjct: 386 WSMKQDACVHDLQAHSKEIYT-------IKWSPTGPATSNPNSSIMLASASFDSTVRLWD 438
Query: 232 L-RG-------DHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+ +G H +P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 439 VEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWN 480
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 55/237 (23%), Positives = 105/237 (44%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + + T LA GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 238 VTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGV 296
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + L +
Sbjct: 297 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCGTDMCIHVCRLGCDLPVKTF 355
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DPS M + S S D TL + +K D ++D K +++++ P
Sbjct: 356 QGHTNEVNAIKWDPSGMLLASCSDD-MTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGP 414
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WDV + + K + + +A+ P G LA
Sbjct: 415 A---TSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLA 468
Score = 140 (54.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 34 TASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
T +S T + IH L +LP K + H + V A+ P+ LAS S D ++K++
Sbjct: 331 TFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 390
Query: 93 G----EFQTNITR-FTL---PIRVLAFNKSGS-MLAAAGDDEGIKLINTIDGSIARVLKG 143
+ Q + +T+ P N + S MLA+A D ++L + G L
Sbjct: 391 DACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTK 450
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN 182
H+ PV +AF P+ +YLAS V W QSG +H+
Sbjct: 451 HQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLVHS 489
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 185 (70.2 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 50/218 (22%), Positives = 102/218 (46%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ AL L P+ T + +G D +V ++ + + T + + F+ S ++ +A
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + + S +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 283 SPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL- 341
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + S+ + PDG + + + ++D + + G H PI
Sbjct: 342 --TKVTDETSG--CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPIT 396
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 434
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNS 73
G+ S+++ + LV ++S + TI I +P+ + +++R H VT L+L
Sbjct: 262 GHTKKVTSVVF-HPSQELVFSASPDATIRIWS--VPNASCVQVVRAHESAVTGLSLHATG 318
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFT--LPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+ + GH GP+T +AF N YLA+ +V W+L R+L N K + D
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQLDNN 435
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ S L + G LA+ G DV +Y ++ +H +++ + K+
Sbjct: 436 FEVKS---LIFDQSGTYLALGG--TDVQIYICKQWTEILHFT-EHSGVTTGVAFGHHAKF 489
Query: 252 MATSSLDRQILIWDV 266
+A++ +DR + + +
Sbjct: 490 IASTGMDRSLKFYSL 504
Score = 48 (22.0 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 416 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 185 (70.2 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 50/218 (22%), Positives = 102/218 (46%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ AL L P+ T + +G D +V ++ + + T + + F+ S ++ +A
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + + S +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 283 SPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL- 341
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + S+ + PDG + + + ++D + + G H PI
Sbjct: 342 --TKVTDETSG--CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPIT 396
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 434
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNS 73
G+ S+++ + LV ++S + TI I +P+ + +++R H VT L+L
Sbjct: 262 GHTKKVTSVVF-HPSQELVFSASPDATIRIWS--VPNASCVQVVRAHESAVTGLSLHATG 318
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFT--LPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+ + GH GP+T +AF N YLA+ +V W+L R+L N K + D
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQLDNN 435
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ S L + G LA+ G DV +Y ++ +H +++ + K+
Sbjct: 436 FEVKS---LIFDQSGTYLALGG--TDVQIYICKQWTEILHFT-EHSGLTTGVAFGHHAKF 489
Query: 252 MATSSLDRQILIWDV 266
+A++ +DR + + +
Sbjct: 490 IASTGMDRSLKFYSL 504
Score = 48 (22.0 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 416 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 185 (70.2 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 50/218 (22%), Positives = 102/218 (46%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ AL L P+ T + +G D +V ++ + + T + + F+ S ++ +A
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSA 282
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + + S +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 283 SPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL- 341
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + S+ + PDG + + + ++D + + G H PI
Sbjct: 342 --TKVTDETSG--CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPIT 396
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 434
Score = 160 (61.4 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNS 73
G+ S+++ + LV ++S + TI I +P+ + +++R H VT L+L
Sbjct: 262 GHTKKVTSVVF-HPSQDLVFSASPDATIRIWS--VPNASCVQVVRAHESAVTGLSLHATG 318
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFT--LPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+ + GH GP+T +AF N YLA+ +V W+L R+L N K + D
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQLDNN 435
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ S L + G LA+ G DV +Y ++ +H +++ + K+
Sbjct: 436 FEVKS---LIFDQSGTYLALGG--TDVQIYICKQWTEILHFT-EHSGLTTGVAFGHHAKF 489
Query: 252 MATSSLDRQILIWDV 266
+A++ +DR + + +
Sbjct: 490 IASTGMDRSLKFYSL 504
Score = 48 (22.0 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 416 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 183 (69.5 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 54/234 (23%), Positives = 108/234 (46%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ + S + T+ I P + + R H V ++ + + S D +VK++
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+F ++++ +R F+ G ++ +A DD+ +KL + H G VT
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY 192
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+ +A+ TV W++++ R L + + + S +++N LS+ P G L
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ-----LHS--AAVNGLSFHPSGNYLI 245
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + + D L++L G H P +++S G+Y A+ D Q+++W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHG-HQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 174 (66.3 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 58/209 (27%), Positives = 96/209 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFNKSGSML 118
H+D VT + SP+ LASGS D +V+++ P + ++ + R T +R + F G
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A DD+ +K+ T L H V F P+ + S TV W+ +S R
Sbjct: 119 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSR 177
Query: 179 E-LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
E +H+ + G + + + P G +A G+ N V ++D T +L H
Sbjct: 178 ECVHSYC----EHGG---FVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-HRLLQHYQLHS 229
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ LS+ P+G Y+ T+S D + I D+
Sbjct: 230 AAVNGLSFHPSGNYLITASSDSTLKILDL 258
Score = 169 (64.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ ++S + T+ + D + H VT + P+ TC+A+ +D++VK++
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ + + L+F+ SG+ L A D +K+++ ++G + L GH+GP T +
Sbjct: 218 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 152 AFDPNSEYLASIDSIGTVIYWE 173
AF EY AS S V+ W+
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWK 299
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/245 (22%), Positives = 107/245 (43%)
Query: 54 PKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
P + RH HRD VT + S N+ LASGS+D + ++ T + +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 111 FNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
F+ SG +LA+ D+ +++ + + G + V + H V + F + + + TV
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
W + L +L + + + +SPDG + V ++D+ + E +
Sbjct: 128 KVWATHRQKFLFSLSQHI-------NWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECV 180
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKP 288
S +H + ++ + P+G +A + +D + +WDV +L Q + +++ P
Sbjct: 181 HSYC-EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP 239
Query: 289 IGNAL 293
GN L
Sbjct: 240 SGNYL 244
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 52/184 (28%), Positives = 81/184 (44%)
Query: 1 MKVRSVKLREAHKCG-NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
+K S R AH + FCS D Q+ VTAS +T + + L L
Sbjct: 92 VKGESTVFR-AHTATVRSVHFCS---DGQS--FVTASDDKT-VKVWATHRQKFLFS-LSQ 143
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H + V SP+ + S S D +VKL+ E + + + F+ SG+ +A
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
AAG D +K+ + + + + H V GL+F P+ YL + S T+ +L GR
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL 263
Query: 180 LHNL 183
L+ L
Sbjct: 264 LYTL 267
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 186 (70.5 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+I H V + PNS LA+GS D +V+L+ G T P+ L+F+ +
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPN 479
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
G LA+AG+D+ +KL + G++ + L+GH +T LAF P+S +AS +V W++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
Query: 175 QS 176
+S
Sbjct: 540 RS 541
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 50/168 (29%), Positives = 80/168 (47%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKSGSML 118
H V + +SP S ASGS D + +L+ F + I L + + F+ + + L
Sbjct: 383 HAYPVWDVDISPFSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A D+ ++L + G+ R+ GH+GPV L+F PN +YLAS + W+L SG
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGT 501
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD-RDT 225
L+ S+ L++SPD +A + N V ++D R T
Sbjct: 502 LFKELR-------GHTDSITSLAFSPDSGLIASASMDNSVRVWDIRST 542
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/215 (28%), Positives = 98/215 (45%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF---TLPIRVLAF 111
KILR H V + +S+ L S S D S++ + G F TN + P+ +
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSF-TNTVLYQGHAYPVWDVDI 392
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
+ A+ D +L + R+ GH V + F PNS YLA+ + TV
Sbjct: 393 SPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W Q G N R+ G ++ LS+SP+G+ LA G + ++D +
Sbjct: 453 WSAQQG----NSVRLFT--GHRGPVLS-LSFSPNGKYLASAGEDQRLKLWDLASGTLFKE 505
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
LRG H I L++SP+ +A++S+D + +WD+
Sbjct: 506 LRG-HTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
Score = 135 (52.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 48/205 (23%), Positives = 85/205 (41%)
Query: 105 PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL--KGHKGPVTGLAFDPNSEYLAS 162
P+ F S L + +D I+ + GS + +GH PV + P S Y AS
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDVDISPFSLYFAS 401
Query: 163 IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
T W + L+ A + + ++ + + P+ LA V ++
Sbjct: 402 GSHDRTARLWSFD---RTYPLRIYAGHL----ADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 223 RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRI 281
+ G H P+ LS+SPNGKY+A++ D+++ +WD+ L + + D I
Sbjct: 455 AQQGNSVRLFTG-HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSI 513
Query: 282 CCMAWKPIGNALAVIDVMGKYGVWE 306
+A+ P +A + VW+
Sbjct: 514 TSLAFSPDSGLIASASMDNSVRVWD 538
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 60/215 (27%), Positives = 111/215 (51%)
Query: 60 HRDGVTALALSPNST----CLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++ NS + SGS+D VK++K+ E Q + L + + +
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
SG+++A++ D I+L + G R + GPV +AF P+S++LA+ +G V
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRSIDA--GPVDAWSVAFSPDSQHLATGSHVGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ +++G++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVETGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++S + + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSTDSQLLVTASDDGYIKIYDV 219
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 51/213 (23%), Positives = 97/213 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +SP+ +AS S+D ++L+ G+ +I + +AF+
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++S D + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269
+ +++SP+ + +SS D+ + +WDV +
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSAR 264
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
+ ++A SP+ LASG+ID + ++ G+ + +PIR L F+ +L A D
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASD 210
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D IK+ + S+A L GH V +AF P+ + S S +V W++ + +H
Sbjct: 211 DGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVH 268
Score = 129 (50.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 46/201 (22%), Positives = 89/201 (44%)
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDD 124
++A SP+S LA+GS V ++ G+ + ++ TR I +A++ G LA+ D
Sbjct: 111 SVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAID 169
Query: 125 EGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
I + + G + L+GH P+ L F +S+ L + G + +++Q L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLS 229
Query: 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244
G +NV ++SPD V ++D + + DH + +
Sbjct: 230 ------GHGSWVLNV-AFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFL-DHQDQVWGVK 281
Query: 245 WSPNGKYMATSSLDRQILIWD 265
++ NG + + D++I ++D
Sbjct: 282 YNRNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 136 (52.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPI 106
+P+ + H V A+ SP S LA+G +D VKL++ G EF+ +++ I
Sbjct: 326 VPTTAMSVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGI 385
Query: 107 RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI 166
+ F+ +GS L AA +D ++ D + L GH G V F ++ + S
Sbjct: 386 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 445
Query: 167 GTVIYWELQS 176
T+ W+L+S
Sbjct: 446 RTLKLWDLRS 455
Score = 101 (40.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 35/141 (24%), Positives = 66/141 (46%)
Query: 171 YWELQSG---RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT-A 226
+W+++S RE+ L ++ + +P +LS S D + L + L+ + V R T +
Sbjct: 489 FWDIRSESIVREMELLGKITA-LDLNPERTELLSCSRD-DLLKIIDLRINAV---RQTFS 543
Query: 227 EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCM 284
F D + + +SP+G Y+A + + + IW+V GK + + I +
Sbjct: 544 APGFKCGSDWTRAV----FSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAV 599
Query: 285 AWKPIGNALAVIDVMGKYGVW 305
AW P G+ + +D K +W
Sbjct: 600 AWSPAGSHVVTVDKGSKAVLW 620
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/234 (23%), Positives = 107/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
+L+ ++S + TI + P + + H V ++ S + LAS S D S+K++
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSEF-KAHTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
F ++ R T +R F+ G ++ + +D+ IK+ +T + G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANF 191
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+AF+PN +AS S TV W+++ + L + + + S +N +S+ P G L
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQ-----VHS--GGVNCVSFHPSGNYLI 244
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + D +++L+G H P+ +S+S G+ + D Q+L+W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 62/244 (25%), Positives = 111/244 (45%)
Query: 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF-PGGEFQTNITRFTLPIRVLAF 111
L + + H+ +T++ SPN LA+GS D + L+ P + + I + F
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDV-ITSVQF 68
Query: 112 NKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
+ G++LA+A D I+L I G + K H PV + F + ++LAS ++
Sbjct: 69 SPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W + R L++L R + +SPDG + + ++D T ++
Sbjct: 128 VWNMYRQRFLYSLYR-------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQCV 179
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQKFDDRICCMAWKPI 289
+ D V F++++PNG +A++ D + IWD+ KL Q + C+++ P
Sbjct: 180 NNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS 239
Query: 290 GNAL 293
GN L
Sbjct: 240 GNYL 243
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 63/255 (24%), Positives = 116/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH--HRDGVTALALSPN 72
G+ A+ S+ + L T S +T + + L P + R+ H+D +T++ SP
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSW-DTFLMLWS-LRPQ--ARAFRYVGHKDVITSVQFSPL 71
Query: 73 STCLASGSIDHSVKLYKFPGGEFQTN-ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
LAS S D +++L+ P +++ T P+R + F+ G LA+A +D+ IK+ N
Sbjct: 72 GNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
L H V F P+ + S T+ W+ + + ++N +G
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDF---VG 187
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
N ++++P+G +A G + V ++D KL H + +S+ P+G Y
Sbjct: 188 F----ANFVAFNPNGTCIASAGSDHTVKIWDI-RVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 252 MATSSLDRQILIWDV 266
+ T+S D + I D+
Sbjct: 243 LITASSDGTLKILDL 257
Score = 160 (61.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 49/182 (26%), Positives = 87/182 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGV---TALALSPNSTCLASGSIDHSVKLY 88
L+ + S + TI I D +N + + + D V +A +PN TC+AS DH+VK++
Sbjct: 158 LIVSCSEDKTIKIWDT---TN-KQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
Query: 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
+ + + + ++F+ SG+ L A D +K+++ ++G + L+GH GPV
Sbjct: 214 DIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 149 TGLAFDPNSEYLASIDSIGTVIYW-----ELQ-SGRELHNLKRVAPDIGSDPSSMNVLSW 202
++F E S + V+ W EL NLKR+ D S P +++
Sbjct: 274 FTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLHFD--SPPHLLDIYPR 331
Query: 203 SP 204
+P
Sbjct: 332 TP 333
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 204 (76.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 66/261 (25%), Positives = 117/261 (44%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF-NKSG 115
++ H D V A S + + +A+ S D VK++ G+ + + F NKS
Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSN 712
Query: 116 SMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+L A G +D +KL + + GH V F P+ E LAS + GT+ W++
Sbjct: 713 HLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772
Query: 175 QSGRELH--NLKRVAPDIGSDPSSMNVL----SWSPDGETLAVPGLKNDVVMYDRDTAEK 228
+S E N+KR P + V+ SWS DG+ + V KN V+++D T+
Sbjct: 773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGL 831
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-IWDVGKKLDI-DRQKFDDRICCMAW 286
L + H I + +SP ++A +L + + +W++ +L + D + + + +
Sbjct: 832 LAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMF 890
Query: 287 KPIGNALAVIDVMGKYGVWES 307
P G++ VWE+
Sbjct: 891 SPDGSSFLTASDDQTIRVWET 911
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 16 NAASFCSILWDQQAHHLVTASSSE 39
N SFC L D Q L + S+
Sbjct: 429 NGKSFCYYLHDLQVDFLTEKNRSQ 452
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 72/265 (27%), Positives = 118/265 (44%)
Query: 70 SPNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEG 126
+P+ +CL A+G D +K+++ G N++ +R L+F SGS+ L +A D+
Sbjct: 118 APDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 177
Query: 127 IKL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
+++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 178 LRIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 236
Query: 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP----- 239
G SS+ +SPD L V+M+D T E+L SL ++P
Sbjct: 237 ------GHQ-SSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDS 289
Query: 240 ---------ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIG 290
+CF SP G Y+AT + DR + IW + K + + +CC + P G
Sbjct: 290 DVHMSSLRSVCF---SPEGLYLATVADDRLLRIWALELKAPVAFAPMTNGLCCTFF-PHG 345
Query: 291 NALAVIDVMGKYGVWESV-VPSSMK 314
+A G W + V SS+K
Sbjct: 346 GIIATGTRDGHVQFWTAPRVLSSLK 370
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 53/221 (23%), Positives = 98/221 (44%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +P+ S L S S D +++++ Q + L + + +
Sbjct: 149 LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 208
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + +VI W+
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDP 268
Query: 175 QSG---RELHN--LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G R LH+ L+ D SS+ + +SP+G LA + +D ++ K
Sbjct: 269 YTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLAT--VADDRLLRIWALELKA 326
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 327 PVAFAPMTNGLC-CTFFPHGGIIATGTRDGHVQFWTAPRVL 366
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 72/282 (25%), Positives = 116/282 (41%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + + ++ D +PSN +LR H V A +P S LASGS D +
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPSNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTA 193
Query: 86 KLYKFP----GGEFQTNITRFT------LP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ G Q + +P + L +N G++LA G +G I
Sbjct: 194 RIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLAT-GSYDGFARIW 252
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ ++ S T I W+ +G AP +
Sbjct: 253 TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 312
Query: 191 GSDPSSMNVL-SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D S N S S D + + V +D K F +G H + + W P G
Sbjct: 313 DVDWQSNNTFASCSTD---MCI-----HVCKLGQDRPIKTF--QG-HTNEVNAIKWDPTG 361
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIG 290
+A+ S D + IW + + + D Q + I + W P G
Sbjct: 362 NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 55/237 (23%), Positives = 108/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + +L R +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTF 345
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DP+ N+L+ D TL + +K D ++D K +++++ P
Sbjct: 346 QGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WDV + + I K + + +A+ P G LA
Sbjct: 405 G---TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 55/253 (21%), Positives = 104/253 (41%)
Query: 22 SILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W+ + L T S I D NL L H+ + AL + + S
Sbjct: 230 SLDWNSEGTLLATGSYDGFARIWTKD----GNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
+D + ++ GE + + P + + +S + A+ D I + +
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNNTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
+GH V + +DP LAS T+ W ++ +H+L+ +I + +
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT-------I 397
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHVQPICFLSWSPNGKYM 252
WSP G P + D+ +L+ + RG H +P+ +++SP+G+Y+
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL 457
Query: 253 ATSSLDRQILIWD 265
A+ S D+ + IW+
Sbjct: 458 ASGSFDKCVHIWN 470
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHS 84
D Q+++ T +S T + IH L + P K + H + V A+ P LAS S D +
Sbjct: 315 DWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMT 372
Query: 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDG 135
+K++ ++ I + ++ +G MLA+A D ++L + G
Sbjct: 373 LKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG 432
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
L H+ PV +AF P+ YLAS V W Q+G +H+ +
Sbjct: 433 ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 481
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/242 (24%), Positives = 105/242 (43%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 YLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVI 296
+ +++ P+ + +SS D+ + +WDVG + I FD + K GN ++
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCI-HTFFDHQDQVWGVKYNGNGSKIV 290
Query: 297 DV 298
V
Sbjct: 291 SV 292
Score = 173 (66.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 60/215 (27%), Positives = 111/215 (51%)
Query: 60 HRDGVTALALSPNST----CLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N + +GS+D VK++K+ E Q ++ L + + +
Sbjct: 15 HDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+ + A++ D I+L + +G + + GPV LAF P+S+YLA+ +G V
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQMKSIDA--GPVDAWTLAFSPDSQYLATGTHMGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ ++SG++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVESGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 58/240 (24%), Positives = 107/240 (44%)
Query: 29 AHHL-VTASSS-ETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVK 86
+H L + ASSS + I + D + I D T LA SP+S LA+G+ V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWT-LAFSPDSQYLATGTHMGKVN 131
Query: 87 LYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145
++ G+ + ++ TR I +A++ G LA+ D I + + G + L+GH
Sbjct: 132 IFGVESGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 146 GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205
P+ L F P+S+ L + G + +++Q NL A + S + +++ PD
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NL---AGTLSGHASWVLNVAFCPD 243
Query: 206 GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
V ++D T + + DH + + ++ NG + + D++I ++D
Sbjct: 244 DTHFVSSSSDKSVKVWDVGTRTCIHTFF-DHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 179 (68.1 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 100/433 (23%), Positives = 174/433 (40%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+++ S+ +D + LV A ++ TI + D L + + + L HR ++ P
Sbjct: 57 GHSSGIDSVTFDA-SEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 75 CLASGSIDHSVKLYKF-PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133
ASGS+D ++K++ G T T + VL F G + + G+D +K+ +
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHT-YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
Query: 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G + K H+G + L F P+ LA+ + TV +W+L++ EL + G +
Sbjct: 174 AGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF-EL-----IGSG-GPE 226
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVVMYD------RDTAEKLFSLRGD---HVQPI--CF 242
+ + LS++PDG+T+ GL+ + ++ D + +S D H + C
Sbjct: 227 TAGVRCLSFNPDGKTVLC-GLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCS 285
Query: 243 LSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIG-NALAVIDVMGK 301
+ S G ++ S + D + ++ C P+ N V+GK
Sbjct: 286 YNQSCVGVWVVDLSRTEPCMAGDTAQS-----NGHPEKRSCSGRDPVVLNDNNSKTVLGK 340
Query: 302 YGVWESVVPSSMKSPTEDIPSSRSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMPS 361
V ++V P + T+ + + N D KE + G S ++S ES M
Sbjct: 341 LSVSQNVDP--LLKETKSLGRLSVSQNS----DPSTKETKSIGR-SSTSQNS--ESSMKE 391
Query: 362 RK---RLRKQTXXXXXXXXXXXXXXXXXPKTESRKKAHSTHKEYSDKGNGSRSMRTSTRK 418
K RL P T R + + K S + TS R+
Sbjct: 392 SKPLGRLSVSQNSDVSKESRTFSSTGSLPGTPHRVSSTNVSKATSGVSTAVSNAATS-RR 450
Query: 419 NMQEAFQPGATPV 431
N +A P A PV
Sbjct: 451 NFTKA-NPKANPV 462
Score = 175 (66.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 68/255 (26%), Positives = 111/255 (43%)
Query: 60 HRDGVTALALSPNST-CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V L + S+ L +G DH V L+ ++ + I + F+ S +L
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EVL 73
Query: 119 AAAGDDEG-IKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI-YWELQS 176
AAG G IKL + + I R L GH+ + F P E+ AS S+ T + W+++
Sbjct: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS-GSLDTNLKIWDIRK 132
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
+H K +NVL ++PDG + G N V ++D TA KL + H
Sbjct: 133 KGCIHTYK-------GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL-TAGKLLTEFKSH 184
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDR--ICCMAWKPIGNA-L 293
I L + P+ +AT S DR + WD+ + ++ + + C+++ P G L
Sbjct: 185 EGQIQSLDFHPHEFLLATGSADRTVKFWDL-ETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Query: 294 AVIDVMGKYGVWESV 308
+ K WE +
Sbjct: 244 CGLQESLKIFSWEPI 258
Score = 63 (27.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 749 NGDKLVRATELVKLLSLDKSMQGAIKLVTKLKLPNLAERFNSILEERLLSETKETPNTTL 808
N D + T+ + S ++ + ++K L ++++ + E R S T P T
Sbjct: 365 NSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLPGTPH 424
Query: 809 LISNNNVT-ARGDVD--VSKASTS----TERSEMVEPIVPSVKFSLPI 849
+S+ NV+ A V VS A+TS T+ + P+ + F+ P+
Sbjct: 425 RVSSTNVSKATSGVSTAVSNAATSRRNFTKANPKANPVNKAADFA-PV 471
Score = 53 (23.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/142 (21%), Positives = 58/142 (40%)
Query: 808 LLISNNNVTARGDVDVSKASTSTERSEMVEPIVPSVKF--SLPIFKKKVKSPEEIK-LGN 864
+L NN+ T G + VS + V+P++ K L + + S +E K +G
Sbjct: 328 VLNDNNSKTVLGKLSVS---------QNVDPLLKETKSLGRLSVSQNSDPSTKETKSIGR 378
Query: 865 EPTIQNQKAKVDNNREVKGIEDNNAGAVTKVEKTKIQSQHPPNVFFKSSNNQENTNKAGE 924
T QN ++ + ++ + + + V+K +T + P + S+ N +KA
Sbjct: 379 SSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLPGTPHRVSST--NVSKATS 436
Query: 925 -VNXXXXXXXXXXNPFFKSSIK 945
V+ F K++ K
Sbjct: 437 GVSTAVSNAATSRRNFTKANPK 458
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 60/244 (24%), Positives = 112/244 (45%)
Query: 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF-PGGEFQTNITRFTLPIRVLAF 111
L + + H+ +T+L LSPN LA+ S D + L+ F P + + + + F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDV-VTSVQF 68
Query: 112 NKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
+ G++LA+A D ++L I G + K H PV + F + ++LA+ ++
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W + R L++L R + +SPDG + + ++D T ++
Sbjct: 128 VWSMYRQRFLYSLYR-------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQCV 179
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQKFDDRICCMAWKPI 289
+ D V F+ ++P+G +A++ D+ + +WDV KL Q + C+++ P
Sbjct: 180 NNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 290 GNAL 293
GN L
Sbjct: 240 GNYL 243
Score = 177 (67.4 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPG--GEFQTNITRFTLPIRVLAFNKSGSM 117
H+D VT++ SP+ LAS S D +V+L+ P G+F + T P+R + F+ G
Sbjct: 59 HKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKF-SEFKAHTAPVRSVDFSADGQF 116
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
LA A +D+ IK+ + L H V F P+ + S T+ W+ +
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
+ ++N + +G N + ++P G +A G V ++D KL H
Sbjct: 177 QCVNNF---SDSVGF----ANFVDFNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHS 228
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ +S+ P+G Y+ T+S D + I D+
Sbjct: 229 GGVNCISFHPSGNYLITASSDGTLKILDL 257
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/234 (22%), Positives = 107/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
+L+ ++S + T+ + P + + H V ++ S + LA+ S D S+K++
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKFSEF-KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
F ++ R T +R F+ G ++ + +D+ IK+ +T + G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F+P+ +AS S TV W+++ + L + + + S +N +S+ P G L
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ-----VHS--GGVNCISFHPSGNYLI 244
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + D +++L+G H P+ +S+S G+ A+ D Q+L+W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 48/182 (26%), Positives = 87/182 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGV---TALALSPNSTCLASGSIDHSVKLY 88
L+ + S + TI I D +N + + + D V + +P+ TC+AS D +VK++
Sbjct: 158 LIVSCSEDKTIKIWDT---TN-KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Query: 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
+ + + + ++F+ SG+ L A D +K+++ ++G + L+GH GPV
Sbjct: 214 DVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 149 TGLAFDPNSEYLASIDSIGTVIYW-----ELQ-SGRELHNLKRVAPDIGSDPSSMNVLSW 202
++F E AS + V+ W EL G NLKR+ D S P +++
Sbjct: 274 FTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFD--SPPHLLDIYPR 331
Query: 203 SP 204
+P
Sbjct: 332 TP 333
Score = 139 (54.0 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 49/200 (24%), Positives = 87/200 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+ + L TAS ++ I + L + RH V SP+ + S S
Sbjct: 107 SVDFSADGQFLATASEDKS-IKVWSMYRQRFLYSLYRHTH-WVRCAKFSPDGRLIVSCSE 164
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D ++K++ + N + + FN SG+ +A+AG D+ +K+ + + +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
+ H G V ++F P+ YL + S GT+ +L GR ++ L+ G V S
Sbjct: 225 QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ------GHTGPVFTV-S 277
Query: 202 WSPDGETLAVPGLKNDVVMY 221
+S GE A G V+++
Sbjct: 278 FSKGGELFASGGADTQVLLW 297
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 40/177 (22%), Positives = 74/177 (41%)
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
T D + R KGHK +T L PN + LA+ ++ W + H R +G
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP----H--ARAYRYVG 58
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+V +SP G LA V ++ D K + H P+ + +S +G++
Sbjct: 59 HKDVVTSV-QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKA-HTAPVRSVDFSADGQF 116
Query: 252 MATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
+AT+S D+ I +W + ++ + + + C + P G + +W++
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 51/204 (25%), Positives = 80/204 (39%)
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165
I L + +G LA A D + L N + A GHK VT + F P+ LAS
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASR 80
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225
TV W + K + S + +S DG+ LA + ++
Sbjct: 81 DRTVRLWIPDKRGKFSEFKAHTAPVRS-------VDFSADGQFLATASEDKSIKVWSMYR 133
Query: 226 AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICC-- 283
L+SL H + +SP+G+ + + S D+ I IWD K ++ F D +
Sbjct: 134 QRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN--FSDSVGFAN 190
Query: 284 -MAWKPIGNALAVIDVMGKYGVWE 306
+ + P G +A VW+
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVWD 214
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 186 (70.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 60/214 (28%), Positives = 97/214 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
LR H GVT + S + + S S D +++ ++ PI L + G
Sbjct: 493 LRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQ 552
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+ D +L + + GH V +AF PN Y+A+ + +V W S
Sbjct: 553 YVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATS 612
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ L RV D ++ L++SPDG+ LA G + V ++D +L L+ DH
Sbjct: 613 GK----LMRVFADCRQ---AVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELK-DH 664
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
I LSWS + +++AT+ D + +WD+ KKL
Sbjct: 665 SASISSLSWSTHNRHLATACSDGTLRLWDI-KKL 697
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 43/155 (27%), Positives = 66/155 (42%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSG 115
I R H + L SP + +GS D S +L+ T + +AF+ +G
Sbjct: 534 IYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNG 593
Query: 116 SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
+ +A D ++L G + RV + VT LAF P+ + LA+ V ++L
Sbjct: 594 NYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLA 653
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+G +L LK + I S LSWS LA
Sbjct: 654 AGAQLAELKDHSASISS-------LSWSTHNRHLA 681
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 185 (70.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P + +ASGS+D +KL+
Sbjct: 76 LIVAGSQSGSIRVWD-LEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 134
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
T +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 135 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVV 194
Query: 152 AFDPNSEYL-ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
F P+ EYL AS S T+ +W+L+ + H V I + + + + ++PDG L
Sbjct: 195 EFHPSIEYLLASGSSSMTIRFWDLE---KFH----VVSCIEEEATPVRCILFNPDGCCL- 246
Query: 211 VPGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 247 YGGFQDSLRVYGWEP-ERCFDV 267
Score = 142 (55.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/159 (25%), Positives = 75/159 (47%)
Query: 109 LAFNKS-GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIG 167
L KS G +LA GDD + + ++ +L GH P+ L E + + G
Sbjct: 26 LVLGKSTGRLLATGGDDCRVN-VWSVAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSG 84
Query: 168 TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
++ W+L++ + L L +I S L + P G +A L D+ ++D
Sbjct: 85 SIRVWDLEAAKILRTLLGHKANICS-------LDFHPYGSFVASGSLDTDIKLWDVRRKG 137
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
+F + H Q + L +SP+GK++A+++ D + +WD+
Sbjct: 138 CIFKYKS-HTQAVRCLRFSPDGKWLASAADDHTVKLWDL 175
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 185 (70.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P + +ASGS+D +KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
T +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVV 195
Query: 152 AFDPNSEYL-ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
F P+ EYL AS S T+ +W+L+ + H V I + + + + ++PDG L
Sbjct: 196 EFHPSIEYLLASGSSSMTIRFWDLE---KFH----VVSCIEEEATPVRCILFNPDGCCL- 247
Query: 211 VPGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 248 YGGFQDSLRVYGWEP-ERCFDV 268
Score = 169 (64.5 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 63/253 (24%), Positives = 110/253 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L ++ LA+G D V ++ ++T T PI L + ++
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI-YWELQSG 177
A I++ + I R L GHK + L F P ++AS S+ T I W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVAS-GSLDTDIKLWDVRRK 137
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
+ K S ++ L +SPDG+ LA + V ++D + +F G H
Sbjct: 138 GCIFKYK-------SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG-HY 189
Query: 238 QPICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNAL-- 293
P+ + + P+ +Y+ A+ S I WD+ K + ++ + C+ + P G L
Sbjct: 190 GPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYG 249
Query: 294 AVIDVMGKYGVWE 306
D + YG WE
Sbjct: 250 GFQDSLRVYG-WE 261
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 183 (69.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 65/256 (25%), Positives = 116/256 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+++ A +V ++SS++TI + + N +++R H VT L+L
Sbjct: 263 GHTKKVSSVIY-HPAQAVVFSASSDSTIRVWS-VTGGNCVQVVRAHESAVTGLSLHATGD 320
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTL--PIRVLAFNKSGSMLAAAGDDEGIKLINT 132
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 321 YLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDL 380
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS 192
+ + GH GPVT +AF N YLA+ ++ W+L R+L N K + D
Sbjct: 381 KERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDL---RKLKNFKTITLDNNY 437
Query: 193 DPSSMNVLSWSPDGETLAVPGLKNDVVMYD-RDTAEKL-FSLRGDHVQPICFLSWSPNGK 250
+ S L + G LAV G +D+ +Y + +E L FS DH + +++ + +
Sbjct: 438 EVKS---LVFDQSGTYLAVGG--SDIRVYICKQWSEVLNFS---DHSGLVTGVAFGEHAQ 489
Query: 251 YMATSSLDRQILIWDV 266
++A++ +DR + + +
Sbjct: 490 FLASTGMDRSLKFYSL 505
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/236 (20%), Positives = 106/236 (44%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ +L L P T + +G D +V ++ + + T + + ++ + +++ +A
Sbjct: 224 GILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSA 283
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + G+ +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 284 SSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVL- 342
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + ++ + PDG + + ++D + + G H P+
Sbjct: 343 --TKVTDETAG--CALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPG-HSGPVT 397
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDR--ICCMAWKPIGNALAV 295
+++S NG Y+AT + D + +WD+ K + D+ + + + G LAV
Sbjct: 398 AIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAV 453
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 183 (69.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 74/284 (26%), Positives = 116/284 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + S I D +P N +LR H V A +P S LASGS D +
Sbjct: 145 EENGAHEINNHSKPMEID-GDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTA 203
Query: 86 KLYKFP----GGEFQTNITR------FTLP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ GG Q + +P + L +N G++LA G +G I
Sbjct: 204 RIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAM-GSYDGFARIW 262
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T +G++A L HKGP+ L ++ Y+ S T I W+ +G AP +
Sbjct: 263 TENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 322
Query: 191 GSD-PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D ++M S S D + + V D K F +G H + + W P+G
Sbjct: 323 DVDWQNNMTFASCSTD---MCI-----HVCRLGCDHPVKTF--QG-HTNEVNAIKWDPSG 371
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNA 292
+A+ S D + IW + + + D Q I + W P G A
Sbjct: 372 MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 415
Score = 149 (57.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 47/222 (21%), Positives = 96/222 (43%)
Query: 52 NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF 111
NL L H+ + AL + + S +D + ++ GE + + P + +
Sbjct: 267 NLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 326
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
++ A+ D I + + +GH V + +DP+ LAS T+
Sbjct: 327 -QNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 385
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W ++ +H+L+ + +I + + WSP G + P + D+ +L+
Sbjct: 386 WSMKQDACVHDLQAHSKEIYT-------IKWSPTGPATSNPNSSIMLASASFDSTVRLWD 438
Query: 232 L-RG-------DHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+ +G H +P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 439 VEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWN 480
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 58/251 (23%), Positives = 109/251 (43%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + + T LA GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 238 VTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYVLSAGV 296
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N + AS + + L +
Sbjct: 297 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCRLGCDHPVKTF 355
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DPS M + S S D TL + +K D ++D K +++++ P
Sbjct: 356 QGHTNEVNAIKWDPSGMLLASCSDD-MTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGP 414
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVID 297
+ +PN M A++S D + +WDV + + K + + +A+ P G LA
Sbjct: 415 A---TSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLAS-G 470
Query: 298 VMGKY-GVWES 307
KY +W +
Sbjct: 471 SFDKYVHIWNT 481
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 47/160 (29%), Positives = 74/160 (46%)
Query: 33 VTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
+T +S T + IH L + P K + H + V A+ P+ LAS S D ++K++
Sbjct: 330 MTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 389
Query: 92 GG----EFQTNITR-FTL---PIRVLAFNKSGS-MLAAAGDDEGIKLINTIDGSIARVLK 142
+ Q + +T+ P N + S MLA+A D ++L + G L
Sbjct: 390 QDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLM 449
Query: 143 GHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN 182
H+ PV +AF P+ +YLAS V W QSG +H+
Sbjct: 450 KHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHS 489
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 58/254 (22%), Positives = 112/254 (44%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
HL+ +SS + T+ + P + + R H V ++ S + L + S D S+KL+
Sbjct: 73 HLLASSSRDKTVRLWVPSVKGE-SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+ + +R F+ G ++ + DD +KL + + G +
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY 191
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F P+S +A+ S TV W++++ L + + + S +++N LS+ P G L
Sbjct: 192 VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ-----VHS--AAVNALSFHPSGNHLL 244
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KK 269
+ + + D L++L G C +S+S +G A++ D+Q+++W
Sbjct: 245 TASSDSTLKILDLLEGRLLYTLHGHQGSASC-VSFSRSGDQFASAGSDQQVMVWRTNFDS 303
Query: 270 LDIDR---QKFDDR 280
+D R QK D R
Sbjct: 304 VDYSRVLQQKRDHR 317
Score = 168 (64.2 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 54/255 (21%), Positives = 112/255 (43%)
Query: 43 SIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF 102
++ DP L N + HRD +T+L SP+ +ASGS+D SV ++ T
Sbjct: 4 ALDDPTLERNF----KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGH 59
Query: 103 TLPIRVLAFNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLA 161
+ + F+ S +LA++ D+ ++L + ++ G + + H G V + F + + L
Sbjct: 60 KDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLL 118
Query: 162 SIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221
+ ++ W + H K + + + + +SPDG+ + V ++
Sbjct: 119 TASDDQSIKLWSV------HRQKIICT-LREHNNWVRCARFSPDGQLMVSVSDDRTVKLW 171
Query: 222 DRDTAEKL--FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFD 278
D + + + F G + ++ + P+ +AT+S D + +WD+ + Q
Sbjct: 172 DASSRQLIHTFCEPGGYSS---YVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHS 228
Query: 279 DRICCMAWKPIGNAL 293
+ +++ P GN L
Sbjct: 229 AAVNALSFHPSGNHL 243
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 59/242 (24%), Positives = 105/242 (43%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 HLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVI 296
+ +++ P+ + +SS D+ + +WDVG + I FD + K GN ++
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCI-HTFFDHQDQVWGVKYNGNGSKIV 290
Query: 297 DV 298
V
Sbjct: 291 SV 292
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 59/215 (27%), Positives = 111/215 (51%)
Query: 60 HRDGVTALALSPNST----CLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N + +GS+D VK++K+ E Q ++ L + + +
Sbjct: 15 HDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+ + A++ D I+L + +G + + GPV LAF P+S++LA+ +G V
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQMKSIDA--GPVDAWTLAFSPDSQHLATGTHMGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ ++SG++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVESGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 58/240 (24%), Positives = 107/240 (44%)
Query: 29 AHHL-VTASSS-ETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVK 86
+H L + ASSS + I + D + I D T LA SP+S LA+G+ V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWT-LAFSPDSQHLATGTHMGKVN 131
Query: 87 LYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145
++ G+ + ++ TR I +A++ G LA+ D I + + G + L+GH
Sbjct: 132 IFGVESGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 146 GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205
P+ L F P+S+ L + G + +++Q NL A + S + +++ PD
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NL---AGTLSGHASWVLNVAFCPD 243
Query: 206 GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
V ++D T + + DH + + ++ NG + + D++I ++D
Sbjct: 244 DTHFVSSSSDKSVKVWDVGTRTCIHTFF-DHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 182 (69.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 50/218 (22%), Positives = 101/218 (46%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ AL L P T + +G D +V ++ + + T + + F+ S ++ +A
Sbjct: 232 GILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSA 291
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + + S +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 292 SPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL- 350
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + S+ + PDG + + + ++D + + G H PI
Sbjct: 351 --TKVTDETSG--CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPIT 405
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 406 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 443
Score = 161 (61.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNS 73
G+ S+++ + LV ++S + TI I +P+ + +++R H VT L+L
Sbjct: 271 GHTKKVTSVVF-HPSQELVFSASPDATIRIWS--VPNASCVQVVRAHESAVTGLSLHATG 327
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFT--LPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 328 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 387
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+ + GH GP+T +AF N YLA+ +V W+L R+L N K + D
Sbjct: 388 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQLDNN 444
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ S L + G LA+ G DV +Y ++ +H +++ + K+
Sbjct: 445 FEVKS---LIFDQSGTYLALGG--TDVQIYICKQWTEILHFT-EHSGLTTGVAFGHHAKF 498
Query: 252 MATSSLDRQILIWDV 266
+A++ +DR + + +
Sbjct: 499 IASTGMDRSLKFYSL 513
Score = 48 (22.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 425 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 467
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 60 HRDGVTALALSPN----STCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N S + +GS+D VK++K+ + Q ++ L + + +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+ + A++ D I+L + +G + + GPV LAF P+S+YLA+ +G V
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDA--GPVDAWTLAFSPDSQYLATGTHVGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ ++SG++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVESGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 58/242 (23%), Positives = 105/242 (43%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVI 296
+ +++ P+ + +SS D+ + +WDVG + + FD + K GN ++
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV-HTFFDHQDQVWGVKYNGNGSKIV 290
Query: 297 DV 298
V
Sbjct: 291 SV 292
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+I H V + PNS LA+GS D +V+L+ G T P+ LAF+ +
Sbjct: 420 RIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPN 479
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
G LA+AG+D+ +KL + G++ + L+GH +T L F P+S +AS +V W++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Query: 175 QS 176
++
Sbjct: 540 RN 541
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 53/168 (31%), Positives = 82/168 (48%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSML 118
H V L +SP S AS S D + +L+ F + I L + + F+ + + L
Sbjct: 383 HAYPVWDLDISPCSLYFASASHDRTARLWSFDR-TYPLRIYAGHLLDVDCVKFHPNSNYL 441
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A D+ ++L +T G+ R+ GH+GPV LAF PN +YLAS + W+L SG
Sbjct: 442 ATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGT 501
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD-RDT 225
L+ +I S L++SPD +A + N V ++D R+T
Sbjct: 502 LYKELRGHTDNITS-------LTFSPDSSLIASASMDNSVRVWDIRNT 542
Score = 161 (61.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 57/212 (26%), Positives = 92/212 (43%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
KILR H V + +S+ L S S D S++ + P+ L +
Sbjct: 336 KILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPC 395
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
A+A D +L + R+ GH V + F PNS YLA+ + TV W
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWST 455
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234
Q G N R+ + L++SP+G+ LA G + ++D + LRG
Sbjct: 456 QQG----NSVRL---FTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 508
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
H I L++SP+ +A++S+D + +WD+
Sbjct: 509 -HTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 183 (69.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+I H V + PNS LA+GS D +V+L+ G T P+ LAF+ +
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 479
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
G LA+AG+D+ +KL + G++ + L+GH +T L F P+S +AS +V W++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Query: 175 QS 176
++
Sbjct: 540 RN 541
Score = 179 (68.1 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 52/168 (30%), Positives = 82/168 (48%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKSGSML 118
H V + +SP S ASGS D + +L+ F + I L + + F+ + + L
Sbjct: 383 HAYPVWDVDISPYSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A D+ ++L + G+ R+ GH+GPV LAF PN +YLAS + W+L SG
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 501
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD-RDT 225
L+ +I S L++SPD +A + N V ++D R+T
Sbjct: 502 LFKELRGHTDNITS-------LTFSPDSSLIASASMDNSVRVWDIRNT 542
Score = 164 (62.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 59/215 (27%), Positives = 98/215 (45%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF---TLPIRVLAF 111
K+LR H V + +S+ L S S D S++ + G F TN + P+ +
Sbjct: 336 KVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSF-TNTVLYQGHAYPVWDVDI 392
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
+ A+ D +L + R+ GH V + F PNS YLA+ + TV
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W Q G N R+ G ++ L++SP+G+ LA G + ++D +
Sbjct: 453 WSAQQG----NSVRLFT--GHRGPVLS-LAFSPNGKYLASAGEDQRLKLWDLASGTLFKE 505
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
LRG H I L++SP+ +A++S+D + +WD+
Sbjct: 506 LRG-HTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 134 (52.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 105 PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL--KGHKGPVTGLAFDPNSEYLAS 162
P+ F S L + +D I+ + GS + +GH PV + P S Y AS
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDVDISPYSLYFAS 401
Query: 163 IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
T W + L+ A + + ++ + + P+ LA V ++
Sbjct: 402 GSHDRTARLWSFD---RTYPLRIYAGHL----ADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 223 RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRI 281
+ G H P+ L++SPNGKY+A++ D+++ +WD+ L + + D I
Sbjct: 455 AQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNI 513
Query: 282 CCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTE 318
+ + P + +A + VW+ + + +PT+
Sbjct: 514 TSLTFSPDSSLIASASMDNSVRVWD-IRNTHCSAPTD 549
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 181 (68.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 50/218 (22%), Positives = 102/218 (46%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ AL L P+ T + +G D +V ++ + + T + + F+ S ++ +A
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + + S +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 283 SPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL- 341
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + S+ + PDG + + + ++D + + G H PI
Sbjct: 342 --TKVTDETSG--CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPIT 396
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 434
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNS 73
G+ S+++ + LV ++S + TI I +P+ + +++R H VT L+L
Sbjct: 262 GHTKKVTSVVF-HPSQELVFSASPDATIRIWS--VPNTSCVQVVRAHESAVTGLSLHATG 318
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFT--LPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+ + GH GP+T +AF N YLA+ +V W+L R+L N K + D
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQLDNN 435
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ S L + G LA+ G DV +Y ++ +H +++ + K+
Sbjct: 436 FEVKS---LIFDQSGTYLALGG--TDVQIYICKQWTEILHFT-EHSGLTTGVAFGHHAKF 489
Query: 252 MATSSLDRQILIWDV 266
+A++ +DR + + +
Sbjct: 490 IASTGMDRSLKFYSL 504
Score = 48 (22.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 416 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 181 (68.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 50/218 (22%), Positives = 102/218 (46%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ AL L P+ T + +G D +V ++ + + T + + F+ S ++ +A
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + + S +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 283 SPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL- 341
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + S+ + PDG + + + ++D + + G H PI
Sbjct: 342 --TKVTDETSG--CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPIT 396
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 434
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNS 73
G+ S+++ + LV ++S + TI I +P+ + +++R H VT L+L
Sbjct: 262 GHTKKVTSVVF-HPSQELVFSASPDATIRIWS--VPNTSCVQVVRAHESAVTGLSLHATG 318
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFT--LPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+ + GH GP+T +AF N YLA+ +V W+L R+L N K + D
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQLDNN 435
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ S L + G LA+ G DV +Y ++ +H +++ + K+
Sbjct: 436 FEVKS---LIFDQSGTYLALGG--TDVQIYICKQWTEILHFT-EHSGLTTGVAFGHHAKF 489
Query: 252 MATSSLDRQILIWDV 266
+A++ +DR + + +
Sbjct: 490 IASTGMDRSLKFYSL 504
Score = 48 (22.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 416 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 181 (68.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 50/218 (22%), Positives = 102/218 (46%)
Query: 63 GVTALALSPNSTC-LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAA 121
G+ AL L P+ T + +G D +V ++ + + T + + F+ S ++ +A
Sbjct: 223 GILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSA 282
Query: 122 GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D I++ + + S +V++ H+ VTGL+ +YL S + ++Q+GR L
Sbjct: 283 SPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVL- 341
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
+V + S+ + PDG + + + ++D + + G H PI
Sbjct: 342 --TKVTDETSG--CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPIT 396
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279
+++S NG Y+AT++ D + +WD+ K + + D+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDN 434
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 61/255 (23%), Positives = 110/255 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNS 73
G+ S+++ + LV ++S + TI I +P+ + +++R H VT L+L
Sbjct: 262 GHTKKVTSVVF-HPSQELVFSASPDATIRIWS--VPNTSCVQVVRAHESAVTGLSLHATG 318
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFT--LPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D G T +T T + F+ G + D IK+ +
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+ + GH GP+T +AF N YLA+ +V W+L R+L N K + D
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQLDNN 435
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+ S L + G LA+ G DV +Y ++ +H +++ + K+
Sbjct: 436 FEVKS---LIFDQSGTYLALGG--TDVQIYICKQWTEILHFT-EHSGLTTGVAFGHHAKF 489
Query: 252 MATSSLDRQILIWDV 266
+A++ +DR + + +
Sbjct: 490 IASTGMDRSLKFYSL 504
Score = 48 (22.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 860 IKLGNEPTIQNQKA-KVDNNREVKGIEDNNAGAVTKVEKTKIQ 901
+KL + ++N K ++DNN EVK + + +G + T +Q
Sbjct: 416 VKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 183 (69.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+I H V + PNS LA+GS D +V+L+ G T P+ LAF+ +
Sbjct: 438 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 497
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
G LA+AG+D+ +KL + G++ + L+GH +T L F P+S +AS +V W++
Sbjct: 498 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
Query: 175 QS 176
++
Sbjct: 558 RN 559
Score = 181 (68.8 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 53/168 (31%), Positives = 82/168 (48%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKSGSML 118
H V L +SP S ASGS D + +L+ F + I L + + F+ + + L
Sbjct: 401 HAYPVWDLDISPYSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYL 459
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A D+ ++L + G+ R+ GH+GPV LAF PN +YLAS + W+L SG
Sbjct: 460 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 519
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD-RDT 225
L+ +I S L++SPD +A + N V ++D R+T
Sbjct: 520 LYKELRGHTDNITS-------LTFSPDSSLIASASMDNSVRVWDIRNT 560
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/215 (28%), Positives = 98/215 (45%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF---TLPIRVLAF 111
KILR H V + +S+ L S S D S++ + G F TN + P+ L
Sbjct: 354 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSF-TNTVLYQGHAYPVWDLDI 410
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
+ A+ D +L + R+ GH V + F PNS YLA+ + TV
Sbjct: 411 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 470
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W Q G N R+ G ++ L++SP+G+ LA G + ++D +
Sbjct: 471 WSAQQG----NSVRLFT--GHRGPVLS-LAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 523
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
LRG H I L++SP+ +A++S+D + +WD+
Sbjct: 524 LRG-HTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
Score = 134 (52.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 47/205 (22%), Positives = 85/205 (41%)
Query: 105 PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL--KGHKGPVTGLAFDPNSEYLAS 162
P+ F S L + +D I+ + GS + +GH PV L P S Y AS
Sbjct: 362 PVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPYSLYFAS 419
Query: 163 IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
T W + L+ A + + ++ + + P+ LA V ++
Sbjct: 420 GSHDRTARLWSFD---RTYPLRIYAGHL----ADVDCVKFHPNSNYLATGSTDKTVRLWS 472
Query: 223 RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRI 281
+ G H P+ L++SPNGKY+A++ D+++ +WD+ L + + D I
Sbjct: 473 AQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 531
Query: 282 CCMAWKPIGNALAVIDVMGKYGVWE 306
+ + P + +A + VW+
Sbjct: 532 TSLTFSPDSSLIASASMDNSVRVWD 556
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 73/284 (25%), Positives = 115/284 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + S I D +P + +LR H V A +P S LASGS D +
Sbjct: 148 EENGAHAINNHSKPMEID-GDVEIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTA 206
Query: 86 KLYKFP----GGEFQTNITR------FTLP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ GG Q + +P + L +N G++LA G +G I
Sbjct: 207 RIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT-GSYDGFARIW 265
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ Y+ S T I W+ +G AP +
Sbjct: 266 TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 325
Query: 191 GSD-PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D ++ S S D + + V D K F +G H + + W P+G
Sbjct: 326 DVDWQNNTTFASCSTD---MCI-----HVCRLGCDRPVKTF--QG-HTNEVNAIKWDPSG 374
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNA 292
+A+ S D + IW + + + D Q I + W P G A
Sbjct: 375 MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 418
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/268 (21%), Positives = 111/268 (41%)
Query: 8 LREA-HKCGNAASFCSILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVT 65
+RE H + S+ W+ L T S I D NL L H+ +
Sbjct: 228 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED----GNLASTLGQHKGPIF 283
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125
AL + + S +D + ++ GE + + P + + ++ + A+ D
Sbjct: 284 ALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDM 342
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
I + + +GH V + +DP+ LAS T+ W ++ +H+L+
Sbjct: 343 CIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQA 402
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHV 237
+ +I + + WSP G + P + D+ +L+ + RG H
Sbjct: 403 HSKEIYT-------IKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQ 455
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWD 265
+P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 456 EPVYSVAFSPDGKYLASGSFDKCVHIWN 483
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 59/258 (22%), Positives = 112/258 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALS-PNSTCLASGS 80
++ W+++ +++++A +TTI I D + H AL + N+T AS S
Sbjct: 284 ALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQQFPFH---SAPALDVDWQNNTTFASCS 339
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D + + + T + + ++ SG +LA+ DD +K+ + +
Sbjct: 340 TDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD 399
Query: 141 LKGHKGPV-------TGLAF-DPNSEY-LASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
L+ H + TG A +PNS LAS TV W+++ G +H L + +
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVY 459
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH-VQPICFLSWSPNGK 250
S +++SPDG+ LA V +++ + + S RG + +C W+ G
Sbjct: 460 S-------VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVC---WNARGD 509
Query: 251 YMATSSLDRQILIWDVGK 268
+ S+ D + + D+ K
Sbjct: 510 KVGASASDGSVCVLDLRK 527
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 73/284 (25%), Positives = 115/284 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + S I D +P + +LR H V A +P S LASGS D +
Sbjct: 148 EENGAHAINNHSKPMEID-GDVEIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTA 206
Query: 86 KLYKFP----GGEFQTNITR------FTLP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ GG Q + +P + L +N G++LA G +G I
Sbjct: 207 RIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT-GSYDGFARIW 265
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ Y+ S T I W+ +G AP +
Sbjct: 266 TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 325
Query: 191 GSD-PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D ++ S S D + + V D K F +G H + + W P+G
Sbjct: 326 DVDWQNNTTFASCSTD---MCI-----HVCRLGCDRPVKTF--QG-HTNEVNAIKWDPSG 374
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNA 292
+A+ S D + IW + + + D Q I + W P G A
Sbjct: 375 MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 418
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/268 (21%), Positives = 111/268 (41%)
Query: 8 LREA-HKCGNAASFCSILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVT 65
+RE H + S+ W+ L T S I D NL L H+ +
Sbjct: 228 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED----GNLASTLGQHKGPIF 283
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125
AL + + S +D + ++ GE + + P + + ++ + A+ D
Sbjct: 284 ALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDM 342
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
I + + +GH V + +DP+ LAS T+ W ++ +H+L+
Sbjct: 343 CIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQA 402
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHV 237
+ +I + + WSP G + P + D+ +L+ + RG H
Sbjct: 403 HSKEIYT-------IKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQ 455
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWD 265
+P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 456 EPVYSVAFSPDGKYLASGSFDKCVHIWN 483
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 59/258 (22%), Positives = 112/258 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALS-PNSTCLASGS 80
++ W+++ +++++A +TTI I D + H AL + N+T AS S
Sbjct: 284 ALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQQFPFH---SAPALDVDWQNNTTFASCS 339
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D + + + T + + ++ SG +LA+ DD +K+ + +
Sbjct: 340 TDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD 399
Query: 141 LKGHKGPV-------TGLAF-DPNSEY-LASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
L+ H + TG A +PNS LAS TV W+++ G +H L + +
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVY 459
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH-VQPICFLSWSPNGK 250
S +++SPDG+ LA V +++ + + S RG + +C W+ G
Sbjct: 460 S-------VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVC---WNARGD 509
Query: 251 YMATSSLDRQILIWDVGK 268
+ S+ D + + D+ K
Sbjct: 510 KVGASASDGSVCVLDLRK 527
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 73/284 (25%), Positives = 115/284 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + S I D +P + +LR H V A +P S LASGS D +
Sbjct: 149 EENGAHAINNHSKPMEID-GDVEIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTA 207
Query: 86 KLYKFP----GGEFQTNITR------FTLP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ GG Q + +P + L +N G++LA G +G I
Sbjct: 208 RIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT-GSYDGFARIW 266
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ Y+ S T I W+ +G AP +
Sbjct: 267 TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 326
Query: 191 GSD-PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D ++ S S D + + V D K F +G H + + W P+G
Sbjct: 327 DVDWQNNTTFASCSTD---MCI-----HVCRLGCDRPVKTF--QG-HTNEVNAIKWDPSG 375
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNA 292
+A+ S D + IW + + + D Q I + W P G A
Sbjct: 376 MLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPA 419
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/268 (21%), Positives = 111/268 (41%)
Query: 8 LREA-HKCGNAASFCSILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVT 65
+RE H + S+ W+ L T S I D NL L H+ +
Sbjct: 229 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED----GNLASTLGQHKGPIF 284
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125
AL + + S +D + ++ GE + + P + + ++ + A+ D
Sbjct: 285 ALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDM 343
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
I + + +GH V + +DP+ LAS T+ W ++ +H+L+
Sbjct: 344 CIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQA 403
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHV 237
+ +I + + WSP G + P + D+ +L+ + RG H
Sbjct: 404 HSKEIYT-------IKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQ 456
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWD 265
+P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 457 EPVYSVAFSPDGKYLASGSFDKCVHIWN 484
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 60/258 (23%), Positives = 112/258 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALS-PNSTCLASGS 80
++ W+++ +++++A +TTI I D + H AL + N+T AS S
Sbjct: 285 ALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQQFPFH---SAPALDVDWQNNTTFASCS 340
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D + + + T + + ++ SG +LA+ DD +K+ + +
Sbjct: 341 TDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHD 400
Query: 141 LKGHKGPV-------TGLAF-DPNSEY-LASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
L+ H + TG A +PNS LAS TV W+++ G LH L + +
Sbjct: 401 LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVY 460
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH-VQPICFLSWSPNGK 250
S +++SPDG+ LA V +++ + + S RG + +C W+ G
Sbjct: 461 S-------VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVC---WNARGD 510
Query: 251 YMATSSLDRQILIWDVGK 268
+ S+ D + + D+ K
Sbjct: 511 KVGASASDGSVCVLDLRK 528
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 60 HRDGVTALALSPN----STCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N S + +GS+D VK++K+ + Q ++ L + + +
Sbjct: 15 HDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+ + A++ D I+L + +G + + GPV LAF P+S+YLA+ +G V
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDA--GPVDAWTLAFSPDSQYLATGTHVGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ ++SG++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVESGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 174 (66.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 58/242 (23%), Positives = 105/242 (43%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVI 296
+ +++ P+ + +SS D+ + +WDVG + + FD + K GN ++
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV-HTFFDHQDQVWGVKYNGNGSKIV 290
Query: 297 DV 298
V
Sbjct: 291 SV 292
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 59/240 (24%), Positives = 107/240 (44%)
Query: 29 AHHL-VTASSS-ETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVK 86
+H L + ASSS + I + D + I D T LA SP+S LA+G+ V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVN 131
Query: 87 LYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145
++ G+ + ++ TR I +A++ G LA+ D I + + G + L+GH
Sbjct: 132 IFGVESGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 146 GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205
P+ L F P+S+ L + G + +++Q NL A + S + +++ PD
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NL---AGTLSGHASWVLNVAFCPD 243
Query: 206 GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
V ++D T + + DH + + ++ NG + + D++I I+D
Sbjct: 244 DTHFVSSSSDKSVKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 60 HRDGVTALALSPN----STCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N S + +GS+D VK++K+ + Q ++ L + + +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+ + A++ D I+L + +G + + GPV LAF P+S+YLA+ +G V
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDA--GPVDAWTLAFSPDSQYLATGTHVGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ ++SG++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVESGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 174 (66.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 58/242 (23%), Positives = 105/242 (43%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVI 296
+ +++ P+ + +SS D+ + +WDVG + + FD + K GN ++
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV-HTFFDHQDQVWGVKYNGNGSKIV 290
Query: 297 DV 298
V
Sbjct: 291 SV 292
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 59/240 (24%), Positives = 107/240 (44%)
Query: 29 AHHL-VTASSS-ETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVK 86
+H L + ASSS + I + D + I D T LA SP+S LA+G+ V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVN 131
Query: 87 LYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145
++ G+ + ++ TR I +A++ G LA+ D I + + G + L+GH
Sbjct: 132 IFGVESGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 146 GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205
P+ L F P+S+ L + G + +++Q NL A + S + +++ PD
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NL---AGTLSGHASWVLNVAFCPD 243
Query: 206 GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
V ++D T + + DH + + ++ NG + + D++I I+D
Sbjct: 244 DTHFVSSSSDKSVKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 187 (70.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 64/285 (22%), Positives = 124/285 (43%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ + ++ T+ + L +I + H D V A S + +A+ S+D VK++
Sbjct: 632 IASCGADKTLQVFKAETGEKLLEI-KAHEDEVLCCAFSADDKFIATCSVDKKVKIWNSMT 690
Query: 93 GEFQTNITRFTLPIRVLAF-NKSGSMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTG 150
GE + + F N S +L A G +D +KL + + GH V+
Sbjct: 691 GELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSVSH 750
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELH--NLKRVAPDIGSDPSSMNVL----SWSP 204
F P+ + LAS + GT+ W+++S E N+K+ + + V+ SWS
Sbjct: 751 CRFSPDDQVLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSA 810
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-I 263
DG + V KN V ++D ++ L + H + + +SP+ ++A +L + + +
Sbjct: 811 DGAKIMVAA-KNKVFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHN-HLAVVALSQYCVEL 868
Query: 264 WDVGKKLDI-DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
W + L + D + + C+ + P G++ +WE+
Sbjct: 869 WSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 913
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 183 (69.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 55/201 (27%), Positives = 95/201 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P + +ASGS+D +KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
T +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVV 195
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F P+ LAS S T+ +W+L+ + H V I + + + + ++PDG L
Sbjct: 196 EFHPSEYLLASGSSDRTIRFWDLE---KFH----VVSCIEEEATPVRCILFNPDGCCL-Y 247
Query: 212 PGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 248 GGFQDSLRVYGWEP-ERCFDV 267
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 64/252 (25%), Positives = 110/252 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L ++ LA+G D V ++ ++T T PI L + ++
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI-YWELQSG 177
A I++ + I R L GHK + L F P ++AS S+ T I W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVAS-GSLDTDIKLWDVRRK 137
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
+ K S ++ L +SPDG+ LA + V ++D + +F G H
Sbjct: 138 GCIFKYK-------SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG-HS 189
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNAL--A 294
P+ + + P+ +A+ S DR I WD+ K + ++ + C+ + P G L
Sbjct: 190 GPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG 249
Query: 295 VIDVMGKYGVWE 306
D + YG WE
Sbjct: 250 FQDSLRVYG-WE 260
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 182 (69.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 63/262 (24%), Positives = 120/262 (45%)
Query: 45 HDPLLPSNLPKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE----FQT 97
++P + +NL L H H V + S + LA+G + S ++Y G+ F
Sbjct: 262 YNPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVD 320
Query: 98 NITRF-TLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPN 156
+ L IR + F+ G+ LA +D+ +K+ + I GH+ + L + +
Sbjct: 321 ESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSD 380
Query: 157 SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN 216
++ S W+++ G+ L ++G + + ++ SPDG +A L N
Sbjct: 381 GRFIVSGSGDKKAKIWDIEKGKCAFTLGN--EEVGPK-NGVTSVAMSPDGRLVAAGSLDN 437
Query: 217 DVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
V ++D T L G H+ + +++SP+GK +A+ SLD+ + +WD+ R +
Sbjct: 438 IVRLWDAQTGYFLERYEG-HLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCR 496
Query: 277 --FD---DRICCMAWKPIGNAL 293
F+ D + +A+ P G+ L
Sbjct: 497 ATFNGHKDFVLSVAFSPDGSWL 518
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 62/267 (23%), Positives = 118/267 (44%)
Query: 12 HKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKIL-RHHRDG---VTAL 67
H + + C + + +L T + I+D + + +DG + ++
Sbjct: 276 HNLQHNSVVCCVNFSNDGKYLATGCNRSA--QIYDVDTGKKVHAFVDESEKDGDLYIRSV 333
Query: 68 ALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGI 127
SP+ LA+G+ D +VK++ + Q L I L ++ G + + D+
Sbjct: 334 CFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 128 KLINTIDGSIARVLKGHK-GP---VTGLAFDPNSEYLA--SIDSIGTVIYWELQSGRELH 181
K+ + G A L + GP VT +A P+ +A S+D+I V W+ Q+G +
Sbjct: 394 KIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNI--VRLWDAQTG---Y 448
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD---HVQ 238
L+R + S S +++SPDG++LA L + ++D + R H
Sbjct: 449 FLERYEGHLDSVYS----VAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD 504
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWD 265
+ +++SP+G ++ + S DR + WD
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 61 RDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAA 120
++GVT++A+SP+ +A+GS+D+ V+L+ G F + +AF+ G LA+
Sbjct: 415 KNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLAS 474
Query: 121 AGDDEGIKLINTIDGSIAR-----VLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
D+ +KL + + GS +R GHK V +AF P+ +L S +V +W+ +
Sbjct: 475 GSLDKSLKLWD-LSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPR 533
Query: 176 SG 177
+G
Sbjct: 534 NG 535
Score = 133 (51.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
LV A S + + + D L + H D V ++A SP+ LASGS+D S+KL+
Sbjct: 429 LVAAGSLDNIVRLWDAQTGYFLERY-EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLS 487
Query: 92 GGEFQTNITRFTLP-----IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKG 146
G ++ R T + +AF+ GS L + D ++ + +G+ +L+GHK
Sbjct: 488 GSRSRSRC-RATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKN 546
Query: 147 PVTGLAFDPNS 157
V +A P +
Sbjct: 547 SVISVALSPKN 557
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 182 (69.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 49/157 (31%), Positives = 78/157 (49%)
Query: 24 LWDQQA--HHLVTASSS-ETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASG 79
+WD H L AS+S + T + P +I H GV + PNS LA+G
Sbjct: 384 VWDLDISPHSLFFASASYDHTARLWS--FDRTYPLRIYAGHLAGVDCVKFHPNSNYLATG 441
Query: 80 SIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIAR 139
S D +V+L+ G T P+R LAF+ +G L +AG+D+ +KL + G++ +
Sbjct: 442 STDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYK 501
Query: 140 VLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
L GH +T + F +S +AS +V W+++S
Sbjct: 502 DLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Score = 171 (65.3 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 62/211 (29%), Positives = 96/211 (45%)
Query: 14 CGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKIL-RHHRDGVTALALSPN 72
CG S L D A + + S +T+I D L S +L + H V L +SP+
Sbjct: 339 CGPVYS-TRFLPDSSA---LLSCSEDTSIRYWD--LESFTNTVLYQGHAYPVWDLDISPH 392
Query: 73 STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKSGSMLAAAGDDEGIKLIN 131
S AS S DH+ +L+ F + I L + + F+ + + LA D+ ++L +
Sbjct: 393 SLFFASASYDHTARLWSFDR-TYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWS 451
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
G+ R+ GH GPV LAF PN +YL S + W+L SG +L DI
Sbjct: 452 AQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDIT 511
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
S +++S D +A + N V ++D
Sbjct: 512 S-------VTFSLDSSVIASASMDNSVRIWD 535
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF---TLPIRVLAF 111
K+L H V + P+S+ L S S D S++ + E TN + P+ L
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDL---ESFTNTVLYQGHAYPVWDLDI 389
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
+ A+A D +L + R+ GH V + F PNS YLA+ + TV
Sbjct: 390 SPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRL 449
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W Q G ++++ G P + L++SP+G+ L G + ++D +
Sbjct: 450 WSAQQG---NSVRLFTGHCG--P--VRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKD 502
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269
L G H I +++S + +A++S+D + IWD+ K
Sbjct: 503 LHG-HTDDITSVTFSLDSSVIASASMDNSVRIWDIKSK 539
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 179 (68.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 71/261 (27%), Positives = 117/261 (44%)
Query: 71 PNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGI 127
P+ +CL A+G D +K+++ G N++ +R L+F SGS+ L +A D+ +
Sbjct: 121 PDISCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTL 180
Query: 128 KL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 181 RIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE- 238
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR----------GD 235
G SS+ +SPD L +V+M+D T E+L L D
Sbjct: 239 -----GHQ-SSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDDSD 292
Query: 236 -HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALA 294
H+ + + +SP G Y+AT + DR + IW + K I + +CC + P G +A
Sbjct: 293 VHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTPIAFAPMTNGLCCTFF-PHGGVIA 351
Query: 295 VIDVMGKYGVWESV-VPSSMK 314
G W + V SS+K
Sbjct: 352 TGTRDGHVQFWTAPRVLSSLK 372
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +P+ S L S S D +++++ Q + L + + +
Sbjct: 151 LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 210
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + VI W+
Sbjct: 211 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDP 270
Query: 175 QSG---RELHNLKRVAPDIGSDP--SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G R LH+ + P SD SS+ + +SP+G LA + +D ++ K
Sbjct: 271 YTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEGLYLAT--VADDRLLRIWALELKT 328
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 329 PIAFAPMTNGLC-CTFFPHGGVIATGTRDGHVQFWTAPRVL 368
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 181 (68.8 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 71/282 (25%), Positives = 115/282 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + + ++ D +P N +LR H V A +P S LASGS D +
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTA 193
Query: 86 KLYKFP----GGEFQTNITRFT------LP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ G Q + +P + L +N G++LA G +G I
Sbjct: 194 RIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLAT-GSYDGFARIW 252
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ ++ S T I W+ +G AP +
Sbjct: 253 TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 312
Query: 191 GSDPSSMNVL-SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D S N S S D + + V +D K F +G H + + W P G
Sbjct: 313 DVDWQSNNTFASCSTD---MCI-----HVCKLGQDRPIKTF--QG-HTNEVNAIKWDPTG 361
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIG 290
+A+ S D + IW + + + D Q + I + W P G
Sbjct: 362 NLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTG 403
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/256 (21%), Positives = 105/256 (41%)
Query: 22 SILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W+ + L T S I D NL L H+ + AL + + S
Sbjct: 230 SLDWNSEGTLLATGSYDGFARIWTKD----GNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
+D + ++ GE + + P + + +S + A+ D I + +
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNNTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
+GH V + +DP LAS T+ W ++ +H+L+ +I + +
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYT-------I 397
Query: 201 SWSPDGETLAVPGLKNDVVMYDR---DTAEKLFSL-RG-------DHVQPICFLSWSPNG 249
WSP G P + D D+ +L+ + RG H +P+ +++SP+G
Sbjct: 398 KWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG 457
Query: 250 KYMATSSLDRQILIWD 265
+Y+A+ S D+ + IW+
Sbjct: 458 RYLASGSFDKCVHIWN 473
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/240 (22%), Positives = 106/240 (44%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + +L R +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTF 345
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DP+ N+L+ D TL + +K D ++D K +++++ P
Sbjct: 346 QGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGP 404
Query: 240 ICFLSWSPNGKYMATS----SLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M S S D + +WDV + + I K + + +A+ P G LA
Sbjct: 405 G---TNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 461
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 59/262 (22%), Positives = 109/262 (41%)
Query: 22 SILWDQQAHHLVTASSSETTI--SIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG 79
++ W+++ + +++A +TTI H P H + N+T AS
Sbjct: 271 ALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFP----FHSAPALDVDWQSNNT-FASC 325
Query: 80 SIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIAR 139
S D + + K T + + ++ +G++LA+ DD +K+ + S
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVH 385
Query: 140 VLKGHKGPV-------TGLAFD-PNSEY-LASIDSIG---TVIYWELQSGRELHNLKRVA 187
L+ H + TG + PN+ LAS+DS TV W++ G +H L +
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQ 445
Query: 188 PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH-VQPICFLSWS 246
+ S +++SPDG LA V +++ T + S RG + +C W+
Sbjct: 446 EPVYS-------VAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVC---WN 495
Query: 247 PNGKYMATSSLDRQILIWDVGK 268
G + S+ D + + D+ K
Sbjct: 496 AAGDKVGASASDGSVCVLDLRK 517
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 57/241 (23%), Positives = 103/241 (42%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSG 115
IL+ H V ++ S N + +G ++K ++ + N T +R L+F ++
Sbjct: 2 ILQAHDQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTD 61
Query: 116 SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
+ DD +K+ + R L GH V + + P L S V W+ +
Sbjct: 62 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAK 121
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD 235
SGREL + + + + W+ +G + + +YD + ++L S RG
Sbjct: 122 SGRELRSFH-------GHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRG- 173
Query: 236 HVQPICFLSWSP-NGKYMATSSLDRQILIWDVGKKL-DID-RQKFDDRICCMAWKPIGNA 292
H + + L+W P + +Y + S D I W VG + I+ D+ + +AW P+G
Sbjct: 174 HNKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHETPQIEINNAHDNSVWDLAWHPVGYL 233
Query: 293 L 293
L
Sbjct: 234 L 234
Score = 143 (55.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 51/260 (19%), Positives = 107/260 (41%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S++W + +VT I + +N+ HR+ V L+ S S
Sbjct: 12 SMIWSNNENWMVTGDDGGA-IKYWQSNM-NNVKVNKTAHRESVRDLSFCRTDLKFCSCSD 69
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D +VK++ F + + ++T ++ + ++ + S+L + G D +KL + G R
Sbjct: 70 DTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSF 129
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
GHK V + ++ N ++ + + ++++S +EL + + D+ L+
Sbjct: 130 HGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDV-------TALA 182
Query: 202 WSPDGETLAVPGLKNDVVMY---DRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258
W P E V G + + + +T + + H + L+W P G + + D
Sbjct: 183 WHPFHEEYFVSGSYDGAIFHWLVGHETPQ--IEINNAHDNSVWDLAWHPVGYLLCSGGND 240
Query: 259 RQILIWDVGKKLDIDRQKFD 278
W + D+ R K++
Sbjct: 241 HATRFWCRNRPGDLTRDKYN 260
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 175 (66.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 60/215 (27%), Positives = 112/215 (52%)
Query: 60 HRDGVTALALSPN----STCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNK 113
H D + ++A N S + +GS+D VK++K+ + Q ++ L + + +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISH 74
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG--LAFDPNSEYLASIDSIGTVIY 171
+ + A++ D I+L + +G + + GPV LAF P+S+YLA+ +G V
Sbjct: 75 TLPIAASSSLDAHIRLWDLDNGKQIKSIDA--GPVDAWTLAFSPDSQYLATGTHVGKVNI 132
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ ++SG++ ++L I S +++SPDG+ LA + + ++D T + L +
Sbjct: 133 FGVESGKKEYSLDTRGKFILS-------IAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
L G H PI L++SP+ + + T+S D I I+DV
Sbjct: 186 LEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 174 (66.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 58/242 (23%), Positives = 105/242 (43%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H+ GV ++ +S AS S+D ++L+ G+ +I + LAF+
Sbjct: 60 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQ 119
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
LA + + G L + +A+ P+ +YLAS G + +++ +
Sbjct: 120 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ LH L+ A I S L++SPD + L + +YD A +L G H
Sbjct: 180 GKLLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-H 231
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVI 296
+ +++ P+ + +SS D+ + +WDVG + + FD + K GN ++
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV-HTFFDHQDQVWGVKYNGNGSKIV 290
Query: 297 DV 298
V
Sbjct: 291 SV 292
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 58/241 (24%), Positives = 109/241 (45%)
Query: 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDG-VTA--LALSPNSTCLASGSIDHSV 85
+H L A+SS ++ H L + K ++ G V A LA SP+S LA+G+ V
Sbjct: 73 SHTLPIAASS--SLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKV 130
Query: 86 KLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
++ G+ + ++ TR I +A++ G LA+ D I + + G + L+GH
Sbjct: 131 NIFGVESGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204
P+ L F P+S+ L + G + +++Q NL A + S + +++ P
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NL---AGTLSGHASWVLNVAFCP 242
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
D V ++D T + + DH + + ++ NG + + D++I ++
Sbjct: 243 DDTHFVSSSSDKSVKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Query: 265 D 265
D
Sbjct: 302 D 302
>ASPGD|ASPL0000054968 [details] [associations]
symbol:AN1387 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319
EMBL:AACD01000019 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN RefSeq:XP_658991.1 ProteinModelPortal:Q5BDJ3
EnsemblFungi:CADANIAT00001220 GeneID:2877164 KEGG:ani:AN1387.2
Uniprot:Q5BDJ3
Length = 306
Score = 175 (66.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 62/266 (23%), Positives = 113/266 (42%)
Query: 33 VTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
+ ++S + +H P L + L H+ G + + S V +++
Sbjct: 30 ILSASGSNALQVHSTTNPDFPLVQTLEAHKAGCHHVVTDAKGSRAVSVGFGGEVVIWESH 89
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKL--INTIDGSIA-RVLKGHKGPV 148
G + I +A + G LA D +K+ +N + I KG G
Sbjct: 90 EGTWSKTKDVVLADIWAVALSADGQYLAGTTQDGHVKVWDMNANEEEIRDHETKGSFG-- 147
Query: 149 TGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGET 208
T + P+ ++AS G+V + ++GR +L + + S +++SP G+
Sbjct: 148 TCIDLSPDGRFIASGHENGSVYIFSTETGRMPFSLSGLVKPVRS-------VAFSPGGKF 200
Query: 209 LAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
LA G +V+YD + E++ SL G H I LSWS G+Y+ + S D ++ +W +
Sbjct: 201 LAAAGDSRVIVLYDTTSGEQVASLTG-HAAWILSLSWSNTGEYLLSGSFDGKVKVWSIDT 259
Query: 269 KLDIDRQKFDDR-ICCMAWKP-IGNA 292
+ + +R I + W P IG +
Sbjct: 260 RNCVATHSETERAIWSVIWLPKIGKS 285
Score = 118 (46.6 bits), Expect = 0.00077, P = 0.00077
Identities = 62/264 (23%), Positives = 108/264 (40%)
Query: 6 VKLREAHKCGNAASFCS-ILWDQQAHHLVTAS-SSETTI-SIHDPLLPSNLPKILRHHRD 62
V+ EAHK G C ++ D + V+ E I H+ +L
Sbjct: 52 VQTLEAHKAG-----CHHVVTDAKGSRAVSVGFGGEVVIWESHEGTWSKTKDVVLAD--- 103
Query: 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGE--FQTNITRFTLPIRVLAFNKSGSMLAA 120
+ A+ALS + LA + D VK++ E + + T+ + + + G +A+
Sbjct: 104 -IWAVALSADGQYLAGTTQDGHVKVWDMNANEEEIRDHETKGSFGT-CIDLSPDGRFIAS 161
Query: 121 AGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGREL 180
++ + + +T G + L G PV +AF P ++LA+ ++ ++ SG ++
Sbjct: 162 GHENGSVYIFSTETGRMPFSLSGLVKPVRSVAFSPGGKFLAAAGDSRVIVLYDTTSGEQV 221
Query: 181 HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240
+L A I S LSWS GE L V ++ DT + + + I
Sbjct: 222 ASLTGHAAWILS-------LSWSNTGEYLLSGSFDGKVKVWSIDT-RNCVATHSETERAI 273
Query: 241 CFLSWSPN-GKY--MATSSLDRQI 261
+ W P GK AT+ +R I
Sbjct: 274 WSVIWLPKIGKSEGFATAGANRSI 297
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 134 (52.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPI 106
+P+ I H V A+ SP S LA+G +D VKL++ G EF+ +++ I
Sbjct: 310 VPTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGI 369
Query: 107 RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI 166
+ F+ +GS L AA +D ++ D + L GH G V F ++ + S
Sbjct: 370 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 429
Query: 167 GTVIYWELQS 176
T+ W+L+S
Sbjct: 430 RTLKLWDLRS 439
Score = 98 (39.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 36/141 (25%), Positives = 66/141 (46%)
Query: 171 YWELQSG---RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT-A 226
+W+++S RE+ L ++ + +P +LS S D + L + L+ + V R T +
Sbjct: 473 FWDIRSESIVREMELLGKITA-LDLNPERTELLSCSRD-DLLKIIDLRINAV---RQTFS 527
Query: 227 EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCM 284
F D + + +SP+G Y+A S + + IW V GK + ++ I +
Sbjct: 528 APGFKCGSDWTRVV----FSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAV 583
Query: 285 AWKPIGNALAVIDVMGKYGVW 305
AW P G+ + +D K +W
Sbjct: 584 AWSPSGSHVVSVDKGSKAVLW 604
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 178 (67.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 70/261 (26%), Positives = 117/261 (44%)
Query: 71 PNSTCL--ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGI 127
P+ +CL A+G D +K+++ G N++ +R L+F +GS+ L +A D+ +
Sbjct: 119 PDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTL 178
Query: 128 KL--INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
++ +N G +VL GH V + P+ L S +V W ++S + L+
Sbjct: 179 RIWDLNK-HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE- 236
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR----------GD 235
G SS+ +SPD L V+M+D T E+L SL D
Sbjct: 237 -----GHQ-SSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSD 290
Query: 236 -HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALA 294
H+ + + +SP G Y+AT + DR + IW + K + + +CC + P G +A
Sbjct: 291 VHMSSLRSVCFSPEGLYLATVADDRLLRIWALELKAPVAFAPMTNGLCCTFF-PHGGVIA 349
Query: 295 VIDVMGKYGVWESV-VPSSMK 314
G W + V SS+K
Sbjct: 350 TGTRDGHVQFWTAPRVLSSLK 370
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/221 (25%), Positives = 100/221 (45%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKS 114
L H+D V L+ +PN S L S S D +++++ Q + L + + +
Sbjct: 149 LSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPD 208
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
SML +A ++ + L + ++ R L+GH+ V F P+S L + +VI W+
Sbjct: 209 CSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDP 268
Query: 175 QSG---RELHNLKRVAPDIGSDP--SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229
+G R LH+ + AP SD SS+ + +SP+G LA + +D ++ K
Sbjct: 269 YTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSPEGLYLAT--VADDRLLRIWALELKA 326
Query: 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+C ++ P+G +AT + D + W + L
Sbjct: 327 PVAFAPMTNGLC-CTFFPHGGVIATGTRDGHVQFWTAPRVL 366
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+I H V + PNS LA+GS D +V+L+ G T P+ LAF+ +
Sbjct: 420 RIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 479
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
G LA+AG+D+ +KL + G++ + L+GH +T L F P+S +AS +V W++
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Query: 175 QS 176
++
Sbjct: 540 RN 541
Score = 179 (68.1 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 53/168 (31%), Positives = 82/168 (48%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKSGSML 118
H V L +SP S ASGS D + +L+ F + I L + + F+ + + L
Sbjct: 383 HAYPVWDLDISPYSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A D+ ++L + G+ R+ GH+GPV LAF PN +YLAS + W+L SG
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 501
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD-RDT 225
L+ +I S L++SPD +A + N V ++D R+T
Sbjct: 502 LYKELRGHTDNITS-------LTFSPDSGLIASASMDNSVRVWDIRNT 542
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 61/215 (28%), Positives = 98/215 (45%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF---TLPIRVLAF 111
KILR H V + +S+ L S S D S++ + G F TN + P+ L
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSF-TNTVLYQGHAYPVWDLDI 392
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
+ A+ D +L + R+ GH V + F PNS YLA+ + TV
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W Q G N R+ G ++ L++SP+G+ LA G + ++D +
Sbjct: 453 WSAQQG----NSVRLFT--GHRGPVLS-LAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 505
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
LRG H I L++SP+ +A++S+D + +WD+
Sbjct: 506 LRG-HTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 133 (51.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 47/205 (22%), Positives = 84/205 (40%)
Query: 105 PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL--KGHKGPVTGLAFDPNSEYLAS 162
P+ F S L + +D I+ + GS + +GH PV L P S Y AS
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPVWDLDISPYSLYFAS 401
Query: 163 IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
T W + L+ A + + ++ + + P+ LA V ++
Sbjct: 402 GSHDRTARLWSFD---RTYPLRIYAGHL----ADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 223 RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRI 281
+ G H P+ L++SPNGKY+A++ D+++ +WD+ L + + D I
Sbjct: 455 AQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 513
Query: 282 CCMAWKPIGNALAVIDVMGKYGVWE 306
+ + P +A + VW+
Sbjct: 514 TSLTFSPDSGLIASASMDNSVRVWD 538
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 180 (68.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/282 (25%), Positives = 115/282 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + + ++ D +P N +LR H V A +P S LASGS D +
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTA 193
Query: 86 KLYKFP----GGEFQTNITRFT------LP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ G Q + +P + L +N G++LA G +G I
Sbjct: 194 RIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLAT-GSYDGFARIW 252
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ ++ S T I W+ +G AP +
Sbjct: 253 TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 312
Query: 191 GSDPSSMNVL-SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D S N S S D + + V +D K F +G H + + W P G
Sbjct: 313 DVDWQSNNTFASCSTD---MCI-----HVCKLGQDRPIKTF--QG-HTNEVNAIKWDPTG 361
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIG 290
+A+ S D + IW + + + D Q + I + W P G
Sbjct: 362 NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 55/237 (23%), Positives = 108/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + +L R +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTF 345
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DP+ N+L+ D TL + +K D ++D K +++++ P
Sbjct: 346 QGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WDV + + I K + + +A+ P G LA
Sbjct: 405 G---TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 55/253 (21%), Positives = 104/253 (41%)
Query: 22 SILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W+ + L T S I D NL L H+ + AL + + S
Sbjct: 230 SLDWNSEGTLLATGSYDGFARIWTKD----GNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
+D + ++ GE + + P + + +S + A+ D I + +
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNNTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
+GH V + +DP LAS T+ W ++ +H+L+ +I + +
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT-------I 397
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHVQPICFLSWSPNGKYM 252
WSP G P + D+ +L+ + RG H +P+ +++SP+G+Y+
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL 457
Query: 253 ATSSLDRQILIWD 265
A+ S D+ + IW+
Sbjct: 458 ASGSFDKCVHIWN 470
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHS 84
D Q+++ T +S T + IH L + P K + H + V A+ P LAS S D +
Sbjct: 315 DWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMT 372
Query: 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDG 135
+K++ ++ I + ++ +G MLA+A D ++L + G
Sbjct: 373 LKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG 432
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
L H+ PV +AF P+ YLAS V W Q+G +H+ +
Sbjct: 433 ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 481
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 180 (68.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 71/282 (25%), Positives = 115/282 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + + ++ D +P N +LR H V A +P S LASGS D +
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTA 193
Query: 86 KLYKFP----GGEFQTNITRFT------LP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ G Q + +P + L +N G++LA G +G I
Sbjct: 194 RIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLAT-GSYDGFARIW 252
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ ++ S T I W+ +G AP +
Sbjct: 253 TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 312
Query: 191 GSDPSSMNVL-SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D S N S S D + + V +D K F +G H + + W P G
Sbjct: 313 DVDWQSNNTFASCSTD---MCI-----HVCKLGQDRPIKTF--QG-HTNEVNAIKWDPTG 361
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIG 290
+A+ S D + IW + + + D Q + I + W P G
Sbjct: 362 NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 55/237 (23%), Positives = 108/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + +L R +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTF 345
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DP+ N+L+ D TL + +K D ++D K +++++ P
Sbjct: 346 QGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WDV + + I K + + +A+ P G LA
Sbjct: 405 G---TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 55/253 (21%), Positives = 104/253 (41%)
Query: 22 SILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W+ + L T S I D NL L H+ + AL + + S
Sbjct: 230 SLDWNSEGTLLATGSYDGFARIWTKD----GNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
+D + ++ GE + + P + + +S + A+ D I + +
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNNTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
+GH V + +DP LAS T+ W ++ +H+L+ +I + +
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT-------I 397
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHVQPICFLSWSPNGKYM 252
WSP G P + D+ +L+ + RG H +P+ +++SP+G+Y+
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL 457
Query: 253 ATSSLDRQILIWD 265
A+ S D+ + IW+
Sbjct: 458 ASGSFDKCVHIWN 470
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHS 84
D Q+++ T +S T + IH L + P K + H + V A+ P LAS S D +
Sbjct: 315 DWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMT 372
Query: 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDG 135
+K++ ++ I + ++ +G MLA+A D ++L + G
Sbjct: 373 LKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG 432
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
L H+ PV +AF P+ YLAS V W Q+G +H+ +
Sbjct: 433 ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 481
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 174 (66.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 62/271 (22%), Positives = 120/271 (44%)
Query: 5 SVKLREAHKCGNAASFCSILWDQQAH---HLVTASSSETTISI---HDPLLPSNLPKILR 58
S+ ++ H +A S+ W + ++ LV + S + + + D L L L
Sbjct: 6 SILFKQEHAHEDA--IWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERL--ELQSTLE 61
Query: 59 HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H+ GV ++ +SP+ +AS S+D ++L+ G+ I + +AF+ L
Sbjct: 62 GHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHL 121
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A + + G L + +A+ P+ +YLAS G + +++ +G+
Sbjct: 122 ATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
LH L+ A I S L++SPD + L + +Y+ A +L G H
Sbjct: 182 LLHTLEGHAMPIRS-------LTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSG-HGS 233
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKK 269
+ +++SP+ + +SS D+ + +WDV +
Sbjct: 234 WVLNVAFSPDDTHFVSSSSDKSVKVWDVSAR 264
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
+ ++A SP+ LASG+ID + ++ G+ + +PIR L F+ +L A D
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D IK+ S+A L GH V +AF P+ + S S +V W++ + +H
Sbjct: 211 DGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVH 268
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/201 (23%), Positives = 91/201 (45%)
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDD 124
++A SP+S LA+GS V ++ G+ + ++ TR I +A++ G LA+ D
Sbjct: 111 SVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKF-ILSIAYSPDGKYLASGAID 169
Query: 125 EGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
I + + G + L+GH P+ L F P+S+ L + G + +E+Q L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLS 229
Query: 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244
G +NV ++SPD V ++D + + DH + +
Sbjct: 230 ------GHGSWVLNV-AFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFL-DHQDQVWGVK 281
Query: 245 WSPNGKYMATSSLDRQILIWD 265
++ NG + + + D++I ++D
Sbjct: 282 YNKNGSKIVSVADDQEIHVYD 302
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 181 (68.8 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PN LAS S T+ +W+L+ + V I +P + + ++PDG L
Sbjct: 196 EFHPNEYLLASGSSDRTIRFWDLEKFQ-------VVSCIEGEPGPVRSILFNPDGCCL-Y 247
Query: 212 PGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 248 SGCQDSLRVYGWEP-ERCFDV 267
Score = 180 (68.4 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + G ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 139 CVFRYR------GHS-QAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 190
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ + + PN +A+ S DR I WD+ K
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 180 (68.4 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + G ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 139 CVFRYR------GHS-QAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 190
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ + + PN +A+ S DR I WD+ K
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 172 (65.6 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 152 AFDPNSEYLASIDSIGTVIYWELQ 175
F PN LAS S T+ +W+L+
Sbjct: 196 EFHPNEYLLASGSSDRTIRFWDLE 219
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/134 (26%), Positives = 61/134 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ A+ CS+ + V + S +T I + D + R H V L SP+
Sbjct: 103 GHKANICSLDFHPYGE-FVASGSQDTNIKLWD-IRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID 134
LAS + DH+VKL+ G+ + T P+ V+ F+ + +LA+ D I+ +
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 135 GSIARVLKGHKGPV 148
+ ++G GPV
Sbjct: 221 FQVVSCIEGEPGPV 234
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 179 (68.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 71/282 (25%), Positives = 115/282 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + + ++ D +P N +LR H V A +P S LASGS D +
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTA 193
Query: 86 KLYKFP----GGEFQTNITRFT------LP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ G Q + +P + L +N G++LA G +G I
Sbjct: 194 RIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLAT-GSYDGFARIW 252
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ ++ S T I W+ +G AP +
Sbjct: 253 TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 312
Query: 191 GSDPSSMNVL-SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D S N S S D + + V +D K F +G H + + W P G
Sbjct: 313 DVDWQSNNTFASCSTD---MCI-----HVCKLGQDRPIKTF--QG-HTNEVNAIKWDPTG 361
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIG 290
+A+ S D + IW + + + D Q + I + W P G
Sbjct: 362 NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 55/237 (23%), Positives = 108/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + +L R +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTF 345
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DP+ N+L+ D TL + +K D ++D K +++++ P
Sbjct: 346 QGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WDV + + I K + + +A+ P G LA
Sbjct: 405 G---TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 55/253 (21%), Positives = 104/253 (41%)
Query: 22 SILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W+ + L T S I D NL L H+ + AL + + S
Sbjct: 230 SLDWNSEGTLLATGSYDGFARIWTKD----GNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
+D + ++ GE + + P + + +S + A+ D I + +
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNNTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
+GH V + +DP LAS T+ W ++ +H+L+ +I + +
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT-------I 397
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHVQPICFLSWSPNGKYM 252
WSP G P + D+ +L+ + RG H +P+ +++SP+G+Y+
Sbjct: 398 KWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL 457
Query: 253 ATSSLDRQILIWD 265
A+ S D+ + IW+
Sbjct: 458 ASGSFDKCVHIWN 470
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHS 84
D Q+++ T +S T + IH L + P K + H + V A+ P LAS S D +
Sbjct: 315 DWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMT 372
Query: 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDG 135
+K++ ++ I + ++ +G MLA+A D ++L + G
Sbjct: 373 LKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRG 432
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
L H+ PV +AF P+ YLAS V W Q+G +H+ +
Sbjct: 433 ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 481
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 174 (66.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 62/225 (27%), Positives = 101/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L + L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVNVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 54/243 (22%), Positives = 107/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ + + N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 46/199 (23%), Positives = 83/199 (41%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D V ++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 179 (68.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 72/282 (25%), Positives = 113/282 (40%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + S I D +P N +LR H V A +P S LASGS D +
Sbjct: 144 EENGAHAINNHSKPMEID-GDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTA 202
Query: 86 KLYKFP----GGEFQTNITR------FTLP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ G Q + +P + L +N G++LA G +G I
Sbjct: 203 RIWNLNENSNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT-GSYDGFARIW 261
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDI 190
T DG++A L HKGP+ L ++ Y+ S T I W+ +G AP +
Sbjct: 262 TEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 321
Query: 191 GSD-PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249
D ++ S S D + + V D K F +G H + + W P+G
Sbjct: 322 DVDWQNNTTFASCSTD---MCI-----HVCRLGCDRPVKTF--QG-HTNEVNAIKWDPSG 370
Query: 250 KYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIG 290
+A+ S D + IW + + + D Q I + W P G
Sbjct: 371 MLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 412
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 57/237 (24%), Positives = 108/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 237 VTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGV 295
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + L R +
Sbjct: 296 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDRPVKTF 354
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DPS M + S S D TL + +K D ++D K +++++ P
Sbjct: 355 QGHTNEVNAIKWDPSGMLLASCSDD-MTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGP 413
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WDV + + I K + + +A+ P G LA
Sbjct: 414 G---TSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLA 467
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 58/268 (21%), Positives = 111/268 (41%)
Query: 8 LREA-HKCGNAASFCSILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVT 65
+RE H + S+ W+ L T S I D NL L H+ +
Sbjct: 224 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTED----GNLASTLGQHKGPIF 279
Query: 66 ALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125
AL + + S +D + ++ GE + + P + + ++ + A+ D
Sbjct: 280 ALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDM 338
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185
I + + +GH V + +DP+ LAS T+ W ++ +H+L+
Sbjct: 339 CIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQA 398
Query: 186 VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHV 237
+ +I + + WSP G + P + D+ +L+ + RG H
Sbjct: 399 HSKEIYT-------IKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQ 451
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWD 265
+P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 452 EPVYSVAFSPDGKYLASGSFDKCVHIWN 479
Score = 131 (51.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 34 TASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
T +S T + IH L + P K + H + V A+ P+ LAS S D ++K++
Sbjct: 330 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 389
Query: 93 GEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDGSIARVLKG 143
++ + I + ++ +G MLA+A D ++L + G L
Sbjct: 390 DTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTK 449
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
H+ PV +AF P+ +YLAS V W QSG +H+ +
Sbjct: 450 HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYR 490
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 177 (67.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPG--GEFQTNITRFTLPIRVLAFNKSGSM 117
H+D VT++ SP+ LAS S D +V+L+ P G+F + T P+R + F+ G
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKF-SEFKAHTAPVRSVDFSADGQF 74
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
LA A +D+ IK+ + L H V F P+ + S T+ W+ +
Sbjct: 75 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
+ ++N + +G N + ++P G +A G V ++D KL H
Sbjct: 135 QCVNNF---SDSVGF----ANFVDFNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHS 186
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ +S+ P+G Y+ T+S D + I D+
Sbjct: 187 GGVNCISFHPSGNYLITASSDGTLKILDL 215
Score = 175 (66.7 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 52/234 (22%), Positives = 107/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
+L+ ++S + T+ + P + + H V ++ S + LA+ S D S+K++
Sbjct: 31 NLLASASRDRTVRLWIPDKRGKFSEF-KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 89
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
F ++ R T +R F+ G ++ + +D+ IK+ +T + G
Sbjct: 90 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 149
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F+P+ +AS S TV W+++ + L + + + S +N +S+ P G L
Sbjct: 150 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ-----VHS--GGVNCISFHPSGNYLI 202
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + D +++L+G H P+ +S+S G+ A+ D Q+L+W
Sbjct: 203 TASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 48/182 (26%), Positives = 87/182 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGV---TALALSPNSTCLASGSIDHSVKLY 88
L+ + S + TI I D +N + + + D V + +P+ TC+AS D +VK++
Sbjct: 116 LIVSCSEDKTIKIWDT---TN-KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Query: 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
+ + + + ++F+ SG+ L A D +K+++ ++G + L+GH GPV
Sbjct: 172 DVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 231
Query: 149 TGLAFDPNSEYLASIDSIGTVIYW-----ELQ-SGRELHNLKRVAPDIGSDPSSMNVLSW 202
++F E AS + V+ W EL G NLKR+ D S P +++
Sbjct: 232 FTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFD--SPPHLLDIYPR 289
Query: 203 SP 204
+P
Sbjct: 290 TP 291
Score = 139 (54.0 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 49/200 (24%), Positives = 87/200 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+ + L TAS ++ I + L + RH V SP+ + S S
Sbjct: 65 SVDFSADGQFLATASEDKS-IKVWSMYRQRFLYSLYRHTH-WVRCAKFSPDGRLIVSCSE 122
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D ++K++ + N + + FN SG+ +A+AG D+ +K+ + + +
Sbjct: 123 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 182
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
+ H G V ++F P+ YL + S GT+ +L GR ++ L+ G V S
Sbjct: 183 QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ------GHTGPVFTV-S 235
Query: 202 WSPDGETLAVPGLKNDVVMY 221
+S GE A G V+++
Sbjct: 236 FSKGGELFASGGADTQVLLW 255
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PN LAS S T+ +W+L+ + V I +P + + ++PDG L
Sbjct: 196 EFHPNEYLLASGSSDRTIRFWDLEKFQ-------VVSCIEGEPGPVRSVLFNPDGCCL-Y 247
Query: 212 PGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 248 SGCQDSLRVYGWEP-ERCFDV 267
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + G ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 139 CVFRYR------GHS-QAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 190
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ + + PN +A+ S DR I WD+ K
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PN LAS S T+ +W+L+ + V I +P + + ++PDG L
Sbjct: 196 EFHPNEYLLASGSSDRTIRFWDLEKFQ-------VVSCIEGEPGPVRSVLFNPDGCCL-Y 247
Query: 212 PGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 248 SGCQDSLRVYGWEP-ERCFDV 267
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + G ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 139 CVFRYR------GHS-QAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 190
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ + + PN +A+ S DR I WD+ K
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PN LAS S T+ +W+L+ + V I +P + + ++PDG L
Sbjct: 196 EFHPNEYLLASGSSDRTIRFWDLEKFQ-------VVSCIEGEPGPVRSVLFNPDGCCL-Y 247
Query: 212 PGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 248 SGCQDSLRVYGWEP-ERCFDV 267
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + G ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 139 CVFRYR------GHS-QAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 190
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ + + PN +A+ S DR I WD+ K
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
F PN LAS S T+ +W+L+ + V I +P + + ++PDG L
Sbjct: 196 EFHPNEYLLASGSSDRTIRFWDLEKFQ-------VVSCIEGEPGPVRSVLFNPDGCCL-Y 247
Query: 212 PGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 248 SGCQDSLRVYGWEP-ERCFDV 267
Score = 180 (68.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + G ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 139 CVFRYR------GHS-QAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 190
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGK 268
P+ + + PN +A+ S DR I WD+ K
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 133 (51.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 46 DPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG--EFQTNITRFT 103
D +P+ + H V A+ SP S LA+G +D VKL++ G EF+ +++
Sbjct: 288 DVRVPTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSN 347
Query: 104 LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI 163
I + F+ +G+ L AA +D ++ D + L GH G V F ++ + S
Sbjct: 348 AGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSG 407
Query: 164 DSIGTVIYWELQS 176
T+ W+L+S
Sbjct: 408 SHDRTLKLWDLRS 420
Score = 97 (39.2 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 32/140 (22%), Positives = 64/140 (45%)
Query: 171 YWELQSG---RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
+W+++S RE+ L ++ + +P +LS S D + L + L+ + + + +
Sbjct: 471 FWDIRSESVVREMELLGKITA-LDLNPERTELLSCSRD-DLLKIIDLRTNAIK--QSFSA 526
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCMA 285
F D + + +SP+G Y+A S D + +W V GK + ++ I +A
Sbjct: 527 PGFKCGSDWTRVV----FSPDGSYVAAGSADGSLYVWSVLTGKVEKVLSKQHSSSINAVA 582
Query: 286 WKPIGNALAVIDVMGKYGVW 305
W P G + +D + +W
Sbjct: 583 WAPSGLHVVSVDKGSRAVLW 602
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 131 (51.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPI 106
+P+ + H V A+ SP S LA+G +D VKL++ G EF+ +++ I
Sbjct: 310 VPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGI 369
Query: 107 RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI 166
+ F+ +GS L AA +D ++ D + L GH G V F ++ + S
Sbjct: 370 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 429
Query: 167 GTVIYWELQS 176
T+ W+L+S
Sbjct: 430 RTLKLWDLRS 439
Score = 99 (39.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 171 YWELQSG---RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
+W+++S RE+ L ++ + +P +LS S D + L V L+ + + + +
Sbjct: 473 FWDIRSESIVREMELLGKITA-LDLNPERTELLSCSRD-DLLKVIDLRTNAIK--QTFSA 528
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCMA 285
F D + + +SP+G Y+A S + + IW V GK + ++ I +A
Sbjct: 529 PGFKCGSDWTRVV----FSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVA 584
Query: 286 WKPIGNALAVIDVMGKYGVW 305
W P G+ + +D K +W
Sbjct: 585 WSPSGSHVVSVDKGCKAVLW 604
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 178 (67.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 72/283 (25%), Positives = 118/283 (41%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSV 85
++ H + + ++ D +P N +LR H V A +P S LASGS D +
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTA 193
Query: 86 KLYKFP----GGEFQTNITRFT------LP----IRVLAFNKSGSMLAAAGDDEGIKLIN 131
+++ G Q + +P + L +N G++LA G +G I
Sbjct: 194 RIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLAT-GSYDGFARIW 252
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG--RELHNLKRVAPD 189
T DG++A L HKGP+ L ++ ++ S T I W+ +G ++L AP
Sbjct: 253 TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHS-APA 311
Query: 190 IGSDPSSMNVL-SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+ D S N S S D + + V +D K F +G H + + W P
Sbjct: 312 LDVDWQSNNTFASCSTD---MCI-----HVCKLGQDRPIKTF--QG-HTNEVNAIKWDPT 360
Query: 249 GKYMATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIG 290
G +A+ S D + IW + + + D Q + I + W P G
Sbjct: 361 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Score = 158 (60.7 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 55/237 (23%), Positives = 109/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G ++ H P + + N+ + AS + + +L R +
Sbjct: 287 DKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTF 345
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DP+ N+L+ D TL + +K D ++D K +++++ P
Sbjct: 346 QGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WDV + + I K + + +A+ P G LA
Sbjct: 405 G---TSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 458
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 55/253 (21%), Positives = 105/253 (41%)
Query: 22 SILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W+ + L T S I D NL L H+ + AL + + S
Sbjct: 230 SLDWNSEGTLLATGSYDGFARIWTKD----GNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
+D + ++ GE + + P + + +S + A+ D I + +
Sbjct: 286 VDKTTIIWDAHTGEAKQLFPFHSAPALDVDW-QSNNTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
+GH V + +DP LAS T+ W ++ +H+L+ +I + +
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT-------I 397
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL-RG-------DHVQPICFLSWSPNGKYM 252
WSP G + P + D+ +L+ + RG H +P+ +++SP+G+Y+
Sbjct: 398 KWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL 457
Query: 253 ATSSLDRQILIWD 265
A+ S D+ + IW+
Sbjct: 458 ASGSFDKCVHIWN 470
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 26 DQQAHHLVTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHS 84
D Q+++ T +S T + IH L + P K + H + V A+ P LAS S D +
Sbjct: 315 DWQSNN--TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMT 372
Query: 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDG 135
+K++ ++ I + ++ +G MLA+A D ++L + G
Sbjct: 373 LKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRG 432
Query: 136 SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184
L H+ PV +AF P+ YLAS V W Q+G +H+ +
Sbjct: 433 ICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 481
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 171
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 172 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 231 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 271
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 161
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 222 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 279
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 280 KAEPPQCTSLAWSADGQTL 298
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 176 (67.0 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 52/213 (24%), Positives = 95/213 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ L+ H +T +A + + +C +GS D + K++ GE + + +AFN
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 115 -GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
G +A D+ KL + G +GH + LAF+P S +A+ T W+
Sbjct: 146 YGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++SG E+ L +I S L ++ G+ L + +++D + K+ L
Sbjct: 206 VESGEEVSTLAGHFAEIIS-------LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258
Query: 234 GDHVQPICF-LSWSPNGKYMATSSLDRQILIWD 265
G + C +W + +AT+SLD+ +WD
Sbjct: 259 GHRGEISCVQFNWDCS--LIATASLDKSCKVWD 289
Score = 175 (66.7 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 56/230 (24%), Positives = 100/230 (43%)
Query: 58 RHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM 117
R H + LA +P ST +A+GS+D + KL+ GE + + I L FN +G
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR 233
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
L D L + G VL GH+G ++ + F+ + +A+ + W+ + G
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG 293
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD-- 235
+ L L +G + ++V ++ G+ +A ++ DT + L L G
Sbjct: 294 QCLATL------LGHNDEVLDVC-FNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKG 346
Query: 236 HVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICC 283
+ +CF + G + T+S+D+ +W V G L + D+ C
Sbjct: 347 EISKVCF---NAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSC 393
Score = 175 (66.7 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 64/240 (26%), Positives = 104/240 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALS-PNSTCLASGS 80
++ +++ +T S + T I D L L HR+ V A+A + P +A+GS
Sbjct: 97 NVAFNKSGSCFITGSY-DRTCKIWDTASGEEL-HTLEGHRNVVYAIAFNNPYGDKVATGS 154
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D + KL+ G+ T I LAFN +++A D KL + G
Sbjct: 155 FDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVST 214
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
L GH + L F+ + L + T I W++ SGR++H L +I S
Sbjct: 215 LAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEI-----SCVQF 269
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG--DHVQPICFLSWSPNGKYMATSSLD 258
+W D +A L ++D + + L +L G D V +CF + G+ +AT+S D
Sbjct: 270 NW--DCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCF---NYTGQLIATASAD 324
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/235 (22%), Positives = 104/235 (44%)
Query: 104 LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD-PNSEYLAS 162
LP+ +AFNKSGS D K+ +T G L+GH+ V +AF+ P + +A+
Sbjct: 93 LPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVAT 152
Query: 163 IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
T W ++G+ + + +I L+++P +A + ++D
Sbjct: 153 GSFDKTCKLWSAETGKCFYTFRGHTAEIVC-------LAFNPQSTLVATGSMDTTAKLWD 205
Query: 223 RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDR 280
++ E++ +L G H I L ++ G + T S D ++WDV G+K+ +
Sbjct: 206 VESGEEVSTLAG-HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHV-LSGHRGE 263
Query: 281 ICCMAWKPIGNALAVIDVMGKYGVWESV---VPSSMKSPTEDIPSSRSNYNGLLL 332
I C+ + + +A + VW++ +++ +++ NY G L+
Sbjct: 264 ISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLI 318
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 47/181 (25%), Positives = 87/181 (48%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNS 73
G+ A S+ ++ LVT S T I + D +PS +L HR ++ + + +
Sbjct: 217 GHFAEIISLCFNTTGDRLVTGSFDHTAI-LWD--VPSGRKVHVLSGHRGEISCVQFNWDC 273
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133
+ +A+ S+D S K++ GG+ + + + FN +G ++A A D ++ +T
Sbjct: 274 SLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTD 333
Query: 134 DGSIARVLKGHKGPVTGLAFDPN-SEYL-ASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
L+GHKG ++ + F+ S L AS+D V W +++G L L+ + +I
Sbjct: 334 TFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRV--WCVKTGACLQVLEGHSDEIF 391
Query: 192 S 192
S
Sbjct: 392 S 392
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 42/178 (23%), Positives = 77/178 (43%)
Query: 139 RVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMN 198
R L+ H P+T +AF+ + + T W+ SG ELH L+ G
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLE------GHRNVVYA 139
Query: 199 VLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258
+ +P G+ +A ++ +T + ++ RG + +C L+++P +AT S+D
Sbjct: 140 IAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVC-LAFNPQSTLVATGSMD 198
Query: 259 RQILIWDV--GKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMK 314
+WDV G+++ F + I + + G+ L +W+ VPS K
Sbjct: 199 TTAKLWDVESGEEVSTLAGHFAE-IISLCFNTTGDRLVTGSFDHTAILWD--VPSGRK 253
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 173 (66.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 62/225 (27%), Positives = 100/225 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 60 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 119
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ + D+ IKL NT+ V + H V+ + F PNS I S G W+
Sbjct: 120 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG----WD 174
Query: 174 -LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
L L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 175 KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 233
Query: 233 RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
G D + +CF SPN +Y ++ I IWD+ K+ +D K
Sbjct: 234 DGGDIINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELK 274
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 83 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 141
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ + + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 142 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV 201
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D +N L +SP+ L
Sbjct: 202 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--IINALCFSPNRYWLCA 253
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + +++ S P C L+WS +G+ + D + +
Sbjct: 254 ATGPSIKIWDLEGKIIVD-ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 312
Query: 264 WDV 266
W V
Sbjct: 313 WQV 315
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ S+ + +V+ S +T I + + L H + V+ + SPNS+
Sbjct: 106 GHTKDVLSVAFSSDNRQIVSGSRDKT-IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 164
Query: 75 --CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + +TN T + + + GS+ A+ G D L +
Sbjct: 165 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 224
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR--VAPDI 190
+G L G + L F PN +L + I W+L+ + LK+ ++
Sbjct: 225 NEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKI-WDLEGKIIVDELKQEVISTSS 282
Query: 191 GSDPSSMNVLSWSPDGETL 209
++P L+WS DG+TL
Sbjct: 283 KAEPPQCTSLAWSADGQTL 301
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 177 (67.4 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 50/205 (24%), Positives = 94/205 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H V ++ S + L + S D S+K++ F ++ R T +R F+ G ++
Sbjct: 101 HTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
+ +D+ IK+ +T + G + F+PN +AS S V W+++ +
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKL 220
Query: 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP 239
L + + + S +N LS+ P G +L V M D +++L+G H P
Sbjct: 221 LQHYQ-----VHS--CGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQG-HTGP 272
Query: 240 ICFLSWSPNGKYMATSSLDRQILIW 264
+ +S+S +G+ + + D Q+LIW
Sbjct: 273 VFTVSFSKDGELLTSGGADAQVLIW 297
Score = 167 (63.8 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 58/253 (22%), Positives = 112/253 (44%)
Query: 44 IHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF-PGGEFQTNITRF 102
+ DP+L + + H+ +T+ SPN +A+ S D + L+ P +
Sbjct: 5 LEDPILERSF----KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHK 60
Query: 103 TLPIRVLAFNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLA 161
+ + L F+ G++LA+A D ++L + G + K H PV + F + + L
Sbjct: 61 DV-VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQLLV 118
Query: 162 SIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221
+ ++ W + R L++L R + +SPDG + + ++
Sbjct: 119 TASEDKSIKVWSMFRQRFLYSLYR-------HTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 222 DRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQKFDDR 280
D T ++ + D V F+ ++PNG +A++ D + IWD+ KL Q
Sbjct: 172 DT-TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG 230
Query: 281 ICCMAWKPIGNAL 293
+ C+++ P+GN+L
Sbjct: 231 VNCLSFHPLGNSL 243
Score = 166 (63.5 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGV---TALALSPNSTCLASGSIDHSVKLY 88
L+ + S + TI I D +N + + + D V + +PN TC+AS DH+VK++
Sbjct: 158 LIVSCSEDKTIKIWDT---TN-KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIW 213
Query: 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
+ + + + L+F+ G+ L A D +K+++ I+G + L+GH GPV
Sbjct: 214 DIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPV 273
Query: 149 TGLAFDPNSEYLASIDSIGTVIYWE-----LQSGRELHNLKRVAPDIGSDPSSMNVLSWS 203
++F + E L S + V+ W L NLKR+ + P +++ S
Sbjct: 274 FTVSFSKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRL--HFEASPHLLDIYPRS 331
Query: 204 P 204
P
Sbjct: 332 P 332
Score = 163 (62.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H+D VT+L SP LAS S D +V+L+ + T P+R + F+ G +L
Sbjct: 59 HKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLV 118
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
A +D+ IK+ + L H V F P+ + S T+ W+ + +
Sbjct: 119 TASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP 239
++N + +G N + ++P+G +A G + V ++D KL H
Sbjct: 179 VNNF---SDSVGF----ANFVDFNPNGTCIASAGSDHAVKIWDI-RMNKLLQHYQVHSCG 230
Query: 240 ICFLSWSPNGKYMATSSLDRQILIWDV 266
+ LS+ P G + T+S D + + D+
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLDL 257
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 49/190 (25%), Positives = 82/190 (43%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
LVTAS ++ I + L + RH V SP+ + S S D ++K++
Sbjct: 117 LVTASEDKS-IKVWSMFRQRFLYSLYRHTH-WVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ N + + FN +G+ +A+AG D +K+ + + + + H V L
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCL 234
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
+F P L + S GTV +L GR ++ L+ G V S+S DGE L
Sbjct: 235 SFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQ------GHTGPVFTV-SFSKDGELLTS 287
Query: 212 PGLKNDVVMY 221
G V+++
Sbjct: 288 GGADAQVLIW 297
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 177 (67.4 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 65/255 (25%), Positives = 116/255 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH--HRDGVTALALSPN 72
G+ A+ S+ + L TAS +T + + + P + R+ H+D VT++ SP
Sbjct: 16 GHKAAITSVDFSPSGKQLATASW-DTFLMLWN-CKPQ--ARAFRYVGHKDVVTSVQFSPL 71
Query: 73 STCLASGSIDHSVKLYKFPGGEFQTN-ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
LAS S D +V+L+ P +++ T P+R + F+ G LA A +D+ IK+ N
Sbjct: 72 GNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
L H V F P+ + S T+ W+ + + ++N + +G
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF---SDSVG 187
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
N + ++P+G +A G + V ++D KL H + +S+ P+G Y
Sbjct: 188 F----ANFVDFNPNGTCIASAGSDHTVKIWDI-RVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 252 MATSSLDRQILIWDV 266
+ T+S D + I D+
Sbjct: 243 IITASSDGTLKILDL 257
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/234 (21%), Positives = 107/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
+L+ ++S + T+ + P + + H V ++ S + LA+ S D S+K++
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKSSEF-KAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
F ++ R T +R F+ G ++ + +D+ IK+ +T + G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F+PN +AS S TV W+++ + L + + + S +N +S+ P G +
Sbjct: 192 VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQ-----VHS--GGVNCVSFHPSGNYII 244
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + D +++L+G H P+ +S+S G+ ++ D Q+L+W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 160 (61.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 55/241 (22%), Positives = 105/241 (43%)
Query: 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN 112
L + + H+ +T++ SP+ LA+ S D + L+ + + F+
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 113 KSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
G++LA+A D ++L I G + K H PV + F + ++LA+ ++
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W + R L++L R + +SPDG + + ++D T ++ +
Sbjct: 129 WNMYRQRFLYSLYR-------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQCVN 180
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQKFDDRICCMAWKPIG 290
D V F+ ++PNG +A++ D + IWD+ KL Q + C+++ P G
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 291 N 291
N
Sbjct: 241 N 241
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/182 (24%), Positives = 89/182 (48%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGV---TALALSPNSTCLASGSIDHSVKLY 88
L+ + S + TI I D +N + + + D V + +PN TC+AS DH+VK++
Sbjct: 158 LIVSCSEDKTIKIWDT---TN-KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
Query: 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
+ + + + ++F+ SG+ + A D +K+++ ++G + L+GH GPV
Sbjct: 214 DIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 149 TGLAFDPNSEYLASIDSIGTVIYWELQ----SGREL--HNLKRVAPDIGSDPSSMNVLSW 202
++F E +S + V+ W + +++ NLKR+ D S P +++
Sbjct: 274 FTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLKRLHFD--SSPHLVDIYPR 331
Query: 203 SP 204
+P
Sbjct: 332 TP 333
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 46/200 (23%), Positives = 87/200 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+ + L TAS ++ I + + L + RH V SP+ + S S
Sbjct: 107 SVDFSADGQFLATASEDKS-IKVWNMYRQRFLYSLYRHTH-WVRCAKFSPDGRLIVSCSE 164
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D ++K++ + N + + FN +G+ +A+AG D +K+ + + +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
+ H G V ++F P+ Y+ + S GT+ +L GR ++ L+ G V S
Sbjct: 225 QVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQ------GHTGPVFTV-S 277
Query: 202 WSPDGETLAVPGLKNDVVMY 221
+S GE + G V+++
Sbjct: 278 FSKGGELFSSGGADTQVLLW 297
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 173 (66.0 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
HR V SP+S + + S D K++ G E + + T R LA++ G ++A
Sbjct: 130 HRAAVADAIFSPDSQIIVTCSDDGQTKIFTRQGQEIASVLKSGTA--RNLAYHPQGLLIA 187
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
+ D + LIN +G I R + +G + + F PN E L + G+ W L +G
Sbjct: 188 SVSDSGSLHLINP-NGKIEREISTGQGRINNVNFSPNGEQLLTSGINGSAKLWNL-AGEL 245
Query: 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP 239
+H K V P +N + P GE LA + + +D + ++ L + +
Sbjct: 246 IHEYK-VVPT-----GWVNSAQFYPKGEWLATASDDGTIRFWQKD-GQLIYELPLVNAR- 297
Query: 240 ICFLSWSPNGKYMATSSLDRQILIWDV 266
+ LS+SP+GK +A +S Q+ ++++
Sbjct: 298 LTSLSFSPDGKQLAATSSQGQVWVFNL 324
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 52/237 (21%), Positives = 100/237 (42%)
Query: 69 LSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128
LSP+ L + D +++L+ G E + F+ ++ DD K
Sbjct: 98 LSPDRQILITTGYDGTIRLWNLQG-ELLEEQQPHRAAVADAIFSPDSQIIVTCSDDGQTK 156
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
+ IA VLK G LA+ P +AS+ G+ ++ +G+ ++R
Sbjct: 157 IFTRQGQEIASVLKS--GTARNLAYHPQGLLIASVSDSGS-LHLINPNGK----IER--- 206
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+I + +N +++SP+GE L G+ +++ E + + + + P
Sbjct: 207 EISTGQGRINNVNFSPNGEQLLTSGINGSAKLWNL-AGELIHEYKVVPTGWVNSAQFYPK 265
Query: 249 GKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVW 305
G+++AT+S D I W +L + + R+ +++ P G LA G+ VW
Sbjct: 266 GEWLATASDDGTIRFWQKDGQLIYELPLVNARLTSLSFSPDGKQLAATSSQGQ--VW 320
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 173 (66.0 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 62/267 (23%), Positives = 129/267 (48%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKI---LRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88
LVT + + + D L N K+ L+ H GV ++A+S + +AS S+D ++ L+
Sbjct: 55 LVTGGLDDL-VKVWD-LQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
G+ + ++ + + + F+ + + +D I + + G + L G
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKY 172
Query: 149 T-GLAFDPNSEYLAS--IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205
T +A+ P+ +Y+AS ID I T+ +++ +G+ + L+ A + S L +SP+
Sbjct: 173 TLSIAYSPDGKYIASGAIDGIITI--FDVAAGKVVQTLEGHAMPVRS-------LCFSPN 223
Query: 206 GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+ L + +YD ++ + +L G H + +++S +GK+ A+SS D + IWD
Sbjct: 224 SQLLLTASDDGHMKLYDVTHSDVVGTLSG-HASWVLCVAFSEDGKHFASSSSDNSVKIWD 282
Query: 266 VGKKLDIDR-QKFDDRICCMAWKPIGN 291
++ + + D++ + + P GN
Sbjct: 283 TSERKCLHTFAEHTDQVWGVRYSP-GN 308
Score = 156 (60.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 58/264 (21%), Positives = 117/264 (44%)
Query: 5 SVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGV 64
++KLR K G+A S+ + +SS ++T+ + D + +L +
Sbjct: 74 TLKLRHKLK-GHALGVVSVAVSSDGQ-TIASSSLDSTMCLWDAR-SGDKKHLLSFGPVDL 130
Query: 65 TALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNIT----RFTLPIRVLAFNKSGSMLAA 120
+ SP + + SG D + +Y G+ + + ++TL I A++ G +A+
Sbjct: 131 WTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSI---AYSPDGKYIAS 187
Query: 121 AGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGREL 180
D I + + G + + L+GH PV L F PNS+ L + G + +++
Sbjct: 188 GAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVT----- 242
Query: 181 HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240
H+ V + S + +++S DG+ A N V ++D + L + +H +
Sbjct: 243 HS--DVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTF-AEHTDQV 299
Query: 241 CFLSWSPNGKYMATSSLDRQILIW 264
+ +SP +A++S D+ + I+
Sbjct: 300 WGVRYSPGNDKVASASEDKSLNIY 323
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 178 (67.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 49/178 (27%), Positives = 89/178 (50%)
Query: 104 LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI 163
L IR + F+ G LA +D+ I++ + +I + GH+ + L F N Y+AS
Sbjct: 317 LYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASG 376
Query: 164 DSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDR 223
TV W++ G+ ++ L S + ++ SPDG +A L V ++D
Sbjct: 377 SGDKTVRLWDIAEGKLVYTL--------SIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDT 428
Query: 224 DTA---EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278
T E+L + G H + ++++PNGK + + SLD+ I +W+ L++ RQ+++
Sbjct: 429 TTGYLVERLENPDG-HKDSVYSVAFAPNGKELVSGSLDKTIKLWE----LNLPRQQYN 481
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 62/250 (24%), Positives = 104/250 (41%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+ + +L T + + I + D + + I H + +L + N +ASGS
Sbjct: 321 SVCFSPDGKYLATGAEDKQ-IRVWD-IATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D +V+L+ G+ ++ + +A + G +AA D+ +++ +T G + L
Sbjct: 379 DKTVRLWDIAEGKLVYTLS-IEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 142 K---GHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMN 198
+ GHK V +AF PN + L S T+ WEL R+ +N
Sbjct: 438 ENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHK 497
Query: 199 --VLS--WSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
VLS +PDG + V +D T L+G H + ++ SP G AT
Sbjct: 498 DFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQG-HKNSVISVAPSPTGNLFAT 556
Query: 255 SSLDRQILIW 264
S D + IW
Sbjct: 557 GSGDMRARIW 566
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 54/235 (22%), Positives = 103/235 (43%)
Query: 90 FPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDD--------EGIKLINTIDGSIARVL 141
+P + R T P + + ++ G+MLA + EG+ + + RVL
Sbjct: 199 YPESRVSPQLARPTPPNQPVVRDRPGNMLANWNPEDLPPSQKKEGVDWYAVFNPEVQRVL 258
Query: 142 KG-------HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
H V + F + +YLA+ + I+ ++ G+ + L+ + D D
Sbjct: 259 DVELVHHLVHDSVVCCVRFSRDGKYLATGCNRSAQIF-DVTLGQNVAVLQDESVDKSGDL 317
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYD--RDTAEKLFSLRGDHVQPICFLSWSPNGKYM 252
+V +SPDG+ LA + ++D T + +FS H Q I L ++ NG+Y+
Sbjct: 318 YIRSVC-FSPDGKYLATGAEDKQIRVWDIATRTIKHIFS---GHEQDIYSLDFAGNGRYI 373
Query: 253 ATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
A+ S D+ + +WD+ + + +D + +A P G +A + VW++
Sbjct: 374 ASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDT 428
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 176 (67.0 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 59/244 (24%), Positives = 111/244 (45%)
Query: 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF-PGGEFQTNITRFTLPIRVLAF 111
L + + H+ +T+L LSPN LA+ S D + L+ F P + + + + F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDV-VTSVQF 68
Query: 112 NKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
+ G++LA+A D ++L I G + K H PV + F + ++LA+ ++
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W + R L++L R + +SPDG + + ++D T ++
Sbjct: 128 VWSMYRQRFLYSLYR-------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TNKQCV 179
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQKFDDRICCMAWKPI 289
+ D V F+ ++P+G +A++ D+ + +WDV KL Q + C+++ P
Sbjct: 180 NNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 290 GNAL 293
N L
Sbjct: 240 DNYL 243
Score = 171 (65.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 55/209 (26%), Positives = 95/209 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPG--GEFQTNITRFTLPIRVLAFNKSGSM 117
H+D VT++ SP+ LAS S D +V+L+ P G+F + T P+R + F+ G
Sbjct: 59 HKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKF-SEFKAHTAPVRSVDFSADGQF 116
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
LA A +D+ IK+ + L H V F P+ + S T+ W+ +
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
+ ++N + +G N + ++P G +A G V ++D KL H
Sbjct: 177 QCVNNF---SDSVGF----ANFVDFNPSGTCIASAGSDQTVKVWDV-RVNKLLQHYQVHS 228
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ +S+ P+ Y+ T+S D + I D+
Sbjct: 229 GGVNCISFHPSDNYLVTASSDGTLKILDL 257
Score = 169 (64.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 51/234 (21%), Positives = 106/234 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
+L+ ++S + T+ + P + + H V ++ S + LA+ S D S+K++
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKFSEF-KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
F ++ R T +R F+ G ++ + +D+ IK+ +T + G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ F+P+ +AS S TV W+++ + L + + + S +N +S+ P L
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ-----VHS--GGVNCISFHPSDNYLV 244
Query: 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ + D +++L+G H P+ +S+S G+ A+ D Q+L+W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 49/200 (24%), Positives = 87/200 (43%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+ + L TAS ++ I + L + RH V SP+ + S S
Sbjct: 107 SVDFSADGQFLATASEDKS-IKVWSMYRQRFLYSLYRHTH-WVRCAKFSPDGRLIVSCSE 164
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D ++K++ + N + + FN SG+ +A+AG D+ +K+ + + +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS 201
+ H G V ++F P+ YL + S GT+ +L GR ++ L+ G V S
Sbjct: 225 QVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ------GHTGPVFTV-S 277
Query: 202 WSPDGETLAVPGLKNDVVMY 221
+S GE A G V+++
Sbjct: 278 FSKGGELFASGGADTQVLLW 297
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 40/177 (22%), Positives = 74/177 (41%)
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
T D + R KGHK +T L PN + LA+ ++ W + H R +G
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP----H--ARAYRYVG 58
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
+V +SP G LA V ++ D K + H P+ + +S +G++
Sbjct: 59 HKDVVTSV-QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKA-HTAPVRSVDFSADGQF 116
Query: 252 MATSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
+AT+S D+ I +W + ++ + + + C + P G + +W++
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 51/204 (25%), Positives = 80/204 (39%)
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165
I L + +G LA A D + L N + A GHK VT + F P+ LAS
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASR 80
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225
TV W + K + S + +S DG+ LA + ++
Sbjct: 81 DRTVRLWIPDKRGKFSEFKAHTAPVRS-------VDFSADGQFLATASEDKSIKVWSMYR 133
Query: 226 AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICC-- 283
L+SL H + +SP+G+ + + S D+ I IWD K ++ F D +
Sbjct: 134 QRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN--FSDSVGFAN 190
Query: 284 -MAWKPIGNALAVIDVMGKYGVWE 306
+ + P G +A VW+
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVWD 214
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 177 (67.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 67/259 (25%), Positives = 108/259 (41%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP----GGEFQTNITRFT- 103
+P++ +LR H V A +P S LASGS D + +++ GG Q +
Sbjct: 153 IPASKAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIR 212
Query: 104 -----LP----IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154
+P + L +N G++LA G +G I T DG++A L HKGP+ L ++
Sbjct: 213 EGGQDVPSNKDVTSLDWNSEGTLLAT-GSYDGFARIWTKDGNLASTLGQHKGPIFALKWN 271
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDIGSDPSSMNVL-SWSPDGETLAVP 212
++ S T I W+ +G AP + D S N S S D + +
Sbjct: 272 KKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD---MCI- 327
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI 272
V ++ K F +G H + + W P G +A+ S D + +W + + +
Sbjct: 328 ----HVCKLGQERPIKTF--QG-HTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCV 380
Query: 273 -DRQKFDDRICCMAWKPIG 290
D Q I + W P G
Sbjct: 381 HDLQAHSKEIYTIKWSPTG 399
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 54/274 (19%), Positives = 113/274 (41%)
Query: 22 SILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W+ + L T S I D NL L H+ + AL + + S
Sbjct: 226 SLDWNSEGTLLATGSYDGFARIWTKD----GNLASTLGQHKGPIFALKWNKKGNFILSAG 281
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
+D + ++ GE + + P + + +S + A+ D I + +
Sbjct: 282 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNNTFASCSTDMCIHVCKLGQERPIKT 340
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP-SSMNV 199
+GH V + +DP LAS T+ W ++ +H+L+ + +I + S
Sbjct: 341 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGP 400
Query: 200 LSWSPDGETLAVPGLKND--VVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSL 257
+ +P+ + D V ++D + + +L H +P+ +++SP+G+++A+ S
Sbjct: 401 GTNNPNANLMLARSASFDSTVRLWDAERGACIHTLT-KHQEPVYSVAFSPDGRHLASGSF 459
Query: 258 DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN 291
D+ + IW+ ++ + I + W G+
Sbjct: 460 DKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGD 493
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 176 (67.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 58/244 (23%), Positives = 108/244 (44%)
Query: 22 SILWDQQAHHLVTASSSETT-ISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ + Q + L +AS +T + + D S+ K H V ++ S + L + S
Sbjct: 65 SLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKA---HTAPVRSVDFSADGQFLVTAS 121
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D S+K++ F ++ R T +R F+ G ++ + +D+ IK+ +T
Sbjct: 122 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNN 181
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
G + F PN +AS S V W+++ R L + + + S +N L
Sbjct: 182 FSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQ-----VHS--CGVNCL 234
Query: 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQ 260
S+ P G +L V + D +++L+G H P+ +S+S +G+ + D Q
Sbjct: 235 SFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG-HTGPVFTVSFSKDGELFTSGGADAQ 293
Query: 261 ILIW 264
+L+W
Sbjct: 294 VLVW 297
Score = 174 (66.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/261 (22%), Positives = 116/261 (44%)
Query: 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF-PGGEFQTNITRFTLPIRVLAF 111
L + + H+ +T+ SPN +A+ S D + L+ P + + + L F
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDV-VTSLQF 68
Query: 112 NKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
+ G++LA+A D+ ++L + G + K H PV + F + ++L + ++
Sbjct: 69 SPQGNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W + R L++L R + +SPDG + + ++D T+++
Sbjct: 128 VWSMYRQRFLYSLYR-------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT-TSKQCV 179
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRIC---CMAWK 287
+ D V F+ +SPNG +A++ D + IWD+ +++ Q + C C+++
Sbjct: 180 NNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDI--RMNRLLQHYQVHSCGVNCLSFH 237
Query: 288 PIGNALAVIDVMGKYGVWESV 308
P GN+L G + + V
Sbjct: 238 PSGNSLVTASSDGTVKILDLV 258
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/185 (25%), Positives = 88/185 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGV---TALALSPNSTCLASGSIDHSVKLY 88
L+ + S + TI I D + + + + D V + SPN TC+AS DH+V+++
Sbjct: 158 LIVSCSEDKTIKIWD----TTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIW 213
Query: 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
+ + + L+F+ SG+ L A D +K+++ ++G + L+GH GPV
Sbjct: 214 DIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPV 273
Query: 149 TGLAFDPNSEYLASIDSIGTVIYWELQSGRELH-------NLKRVAPDIGSDPSSMNVLS 201
++F + E S + V+ W S ++H NLKR+ + + P +++
Sbjct: 274 FTVSFSKDGELFTSGGADAQVLVWRT-SFNQVHYRDPSKRNLKRL--HLEASPHLLDIYP 330
Query: 202 WSPDG 206
+P G
Sbjct: 331 RTPHG 335
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 38/175 (21%), Positives = 73/175 (41%)
Query: 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
D + R KGHK +T F PN + +A+ ++ W L+ H R +G
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKP----H--ARAYRYVGHK 60
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253
+ L +SP G LA V ++ D K + H P+ + +S +G+++
Sbjct: 61 -DVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKA-HTAPVRSVDFSADGQFLV 118
Query: 254 TSSLDRQILIWDVGKKLDI-DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307
T+S D+ I +W + ++ + + + C + P G + +W++
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 175 (66.7 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 64/254 (25%), Positives = 111/254 (43%)
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS-MLAAAGDDEGIKLINTID 134
LA+G + +K++ G N+ T +R L F GS ML +A D+ +++ + D
Sbjct: 148 LATGLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKD 207
Query: 135 -GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G++ +VL GH V AF P+S L S+ + V+ W + + L+ D+ S
Sbjct: 208 DGNMVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGHHNDVVS- 266
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR------------GDHVQPIC 241
+SPDG LA V+++D L L G + + +
Sbjct: 267 ------CEFSPDGALLATASYDTRVIVWDHQRGSILLELGHLFPPPSPIFAGGANDRWVR 320
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGK 301
+S+ +G+++A+ S DR + W + ++ + +CC A+ G+ LA G
Sbjct: 321 SVSFCADGRHIASVSDDRLVRFWSIEERAPQAVASLPNGLCC-AFSTTGSVLAAGTCDGS 379
Query: 302 YGVWESVVPSSMKS 315
WE P S+ S
Sbjct: 380 VHFWEC--PRSIAS 391
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 117 MLAAAGDDEG-IKLINTIDGSIARVLKGHKGPVTGLAFDPN-SEYLASIDSIGTVIYWEL 174
+L A G + G IK+ + G++ L H V L F P+ S L S + + W+L
Sbjct: 146 LLLATGLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDL 205
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234
+ N+ +V + P+ + ++SPD L G V++++ D + L G
Sbjct: 206 KDDG---NMVKV---LWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEG 259
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
H + +SP+G +AT+S D ++++WD
Sbjct: 260 HH-NDVVSCEFSPDGALLATASYDTRVIVWD 289
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 51/223 (22%), Positives = 91/223 (40%)
Query: 57 LRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVL--AFNK 113
L H D V L +P+ S L S S D ++++ + + P RV AF+
Sbjct: 171 LMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVL-WGHPNRVYSSAFSP 229
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
S+L + G + + L N ++ R L+GH V F P+ LA+ VI W+
Sbjct: 230 DSSVLCSVGASKAVLLWNMDKYTLIRKLEGHHNDVVSCEFSPDGALLATASYDTRVIVWD 289
Query: 174 LQSGRELHNLKRVAPDI------GSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
Q G L L + P G++ + +S+ DG +A + +D ++ E
Sbjct: 290 HQRGSILLELGHLFPPPSPIFAGGANDRWVRSVSFCADGRHIA--SVSDDRLVRFWSIEE 347
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270
+ +C ++S G +A + D + W+ + +
Sbjct: 348 RAPQAVASLPNGLC-CAFSTTGSVLAAGTCDGSVHFWECPRSI 389
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 182 (69.1 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 60/231 (25%), Positives = 107/231 (46%)
Query: 36 SSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95
S T I + D +L KIL+ H + +A S +S L +GS+D +V+L+ G+
Sbjct: 750 SRDSTCIMLFDTAT-GDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDL 808
Query: 96 QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFD 154
+ T + +A + G + + G E +KL + G + + L G G V AF
Sbjct: 809 EKTFVGHTGTVLSVAISSDGRQIVS-GSIEAVKLWDAATGDLLKTLASGFAGSV---AFS 864
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL 214
P+S +A+ G + W+ +G L+R P ++ +++SPD + L
Sbjct: 865 PDSRQIAAGFKDGKIFIWDA-AGTLQKTLER-------HPGAIMSIAFSPDVKQLVTCST 916
Query: 215 KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+ + +D T + G H + + + SP+GK +A+ S D+ I +WD
Sbjct: 917 DSTIKRWDI-TIGGVQEAVG-HSKHVTTMVLSPDGKVIASGSADKTIKLWD 965
Score = 177 (67.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 74/324 (22%), Positives = 146/324 (45%)
Query: 21 CSIL-WDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG 79
CS + + + LVT S + T+ + + +L K H V ++A+S + + SG
Sbjct: 777 CSTMAFSSDSRQLVTGSV-DCTVRLWNTTT-GDLEKTFVGHTGTVLSVAISSDGRQIVSG 834
Query: 80 SIDHSVKLYKFPGGEF-QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA 138
SI+ +VKL+ G+ +T + F + AF+ +AA G +G I G++
Sbjct: 835 SIE-AVKLWDAATGDLLKTLASGFAGSV---AFSPDSRQIAA-GFKDGKIFIWDAAGTLQ 889
Query: 139 RVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMN 198
+ L+ H G + +AF P+ + L + + T+ W++ G V +G +
Sbjct: 890 KTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-------VQEAVGHS-KHVT 941
Query: 199 VLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258
+ SPDG+ +A + ++D T + +L G H+ + + +S + + + + S +
Sbjct: 942 TMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTG-HLDTVEKVVFSLDNRQIVSCSSE 1000
Query: 259 RQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTE 318
+ IWD + + DD +A P G +A G+ +W+ S +K+
Sbjct: 1001 A-VKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKT--- 1056
Query: 319 DIPSSRSNYNGLL---LFDEEEKE 339
+ RS ++ L+ +FD + +E
Sbjct: 1057 -MAGYRSKFDSLVTTEVFDIQLQE 1079
Score = 155 (59.6 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 71/270 (26%), Positives = 116/270 (42%)
Query: 40 TTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQ--- 96
TT S+ L S+ + + ++ V A+A P+S + SG D SV L+ G+ Q
Sbjct: 650 TTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIA 709
Query: 97 -------TNITRFTLP------IRVLAFNKSGSMLAAAG---DDEGIKLINTIDGSIARV 140
N T P + AF+ +AA G D I L +T G + ++
Sbjct: 710 DHFGISKVNYTYLQPPEQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKI 769
Query: 141 LKGHKGPVTGLAFDPNSEYLA--SIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMN 198
LKGH + +AF +S L S+D TV W +G +L++ +G + ++
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDC--TVRLWNTTTG----DLEKTF--VGHTGTVLS 821
Query: 199 VLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258
V + S DG + V G V ++D T + L +L + F SP+ + +A D
Sbjct: 822 V-AISSDGRQI-VSGSIEAVKLWDAATGDLLKTLASGFAGSVAF---SPDSRQIAAGFKD 876
Query: 259 RQILIWDVGKKLDIDRQKFDDRICCMAWKP 288
+I IWD L ++ I +A+ P
Sbjct: 877 GKIFIWDAAGTLQKTLERHPGAIMSIAFSP 906
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 179 (68.1 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 70/283 (24%), Positives = 126/283 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
K L H V + + SP++ L SGS D +V+L+ + P+ ++F+
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
G A A D+ +L + R+ GH V ++F PN Y+ + S T W++
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 175 QSGRELHN-LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVV-MYDRDTAEKLFSL 232
+G + L AP I ++ PDG L+ G ++ ++ ++D T ++L +
Sbjct: 639 STGDSVRLFLGHTAPVIS--------IAVCPDGRWLST-GSEDGIINVWDIGTGKRLKQM 689
Query: 233 RGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNA 292
RG I LS+S G + + D + +WD+ K + D+ + + +G+
Sbjct: 690 RGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPF--IGY--LGDV 745
Query: 293 LAVIDV-MGKYGVWESVVPSS--------MKSPTEDIPSSRSN 326
A I+ + +YG +V+P+S K+P + SRSN
Sbjct: 746 TASINQDIKEYGRRRTVIPTSDLVASFYTKKTPVFKVKFSRSN 788
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 55/239 (23%), Positives = 105/239 (43%)
Query: 32 LVTASSSETTISIHDPLLPS-NLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89
LV A+ S+ ++ P S P +L H V PN LAS D + ++
Sbjct: 25 LVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWN 84
Query: 90 FPGG-EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV 148
G E + + + L +N GS+L +A D+ + + ++ G + LKGH V
Sbjct: 85 VYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFV 144
Query: 149 TGLAFDPNSEYLASIDSI-GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE 207
LA S GTV W+++ +H + + ++++ +
Sbjct: 145 NSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLS--------VTFNDTSD 196
Query: 208 TLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ G+ ND+ ++D + ++S++G H + LS S +G Y+ ++S+D + +WD+
Sbjct: 197 QIISGGIDNDIKVWDLRQNKLIYSMQG-HGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 50/237 (21%), Positives = 106/237 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLA-SGSIDHSVKLYKF 90
L+ ++S++ T+ + D + K L+ H V + + LA +GS D +VKL+
Sbjct: 113 LLFSASTDKTVCVWDSETGERV-KRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI 171
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+ + + T + + FN + + + G D IK+ + + ++GH VTG
Sbjct: 172 RK-KASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG 230
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP-DIGSDPSSMNVLSWSPDGETL 209
L+ + YL S +V W+++ ++ ++ + ++ SWS DG +
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKI 290
Query: 210 AVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
A V ++D T ++ L G H + +++ P + + S D+++ I ++
Sbjct: 291 AAGSADRFVYIWDTTTRRIVYKLPG-HAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 46/177 (25%), Positives = 79/177 (44%)
Query: 7 KLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTA 66
K H N S+ ++ + +++ + I + D L + L ++ H D VT
Sbjct: 173 KKASVHTFQNTYQVLSVTFNDTSDQIISGGI-DNDIKVWD-LRQNKLIYSMQGHGDSVTG 230
Query: 67 LALSPNSTCLASGSIDHSVKLYK---FPGGE-----FQTNITRFTLPIRVLAFNKSGSML 118
L+LS + + L S S+D+SV+++ F E FQ N+ F + +++ GS +
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKI 290
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
AA D + + +T I L GH G V +AF P + S S + E+Q
Sbjct: 291 AAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 50/217 (23%), Positives = 92/217 (42%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L+ H V L + + + L S S D +V ++ GE + T + + G
Sbjct: 95 LKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGP 154
Query: 117 MLAAAGDDEG-IKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
LA G D+G +KL + + + + V + F+ S+ + S + W+L+
Sbjct: 155 QLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLR 213
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD------RDTAEKL 229
+ +++++ G S+ LS S DG L + N V ++D ++ K+
Sbjct: 214 QNKLIYSMQ------GHG-DSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKI 266
Query: 230 FSLRGDHVQP-ICFLSWSPNGKYMATSSLDRQILIWD 265
F + + + SWS +G +A S DR + IWD
Sbjct: 267 FQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWD 303
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 184 (69.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 64/268 (23%), Positives = 118/268 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++ ++ I I S L ++ H + ++ + S + LAS S D++V ++
Sbjct: 1536 MIASAGKDSIIHIFKASNGSELLTLVGHS-NWISCFSFSDDGKTLASSSWDNTVIVWDLI 1594
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGS-MLAAAGDDEGIKLINTIDGSIARVLKG-HKGPVT 149
G + + F+ + + +L + D I + NT D +I R + H PV
Sbjct: 1595 VGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVN 1654
Query: 150 GLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL 209
+ P+ +AS GT+ W LK V D S+ +S + + +
Sbjct: 1655 SCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVI-DASLSYGSIKSCKFSANSKQI 1713
Query: 210 AVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD--VG 267
+KNDV+++D ++ +KL S+ G+H + + S S +G Y+ T S D +W +G
Sbjct: 1714 LATTMKNDVLLFDVNS-QKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLG 1772
Query: 268 KKLDIDRQKFDDRICCMAWKPIGNALAV 295
+L D C+A+ P LAV
Sbjct: 1773 TQLTNFLIPGDCWANCLAFSPTQPLLAV 1800
Score = 183 (69.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/170 (30%), Positives = 87/170 (51%)
Query: 111 FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
+++ GSM+A+AG D I + +GS L GH ++ +F + + LAS TVI
Sbjct: 1530 YSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVI 1589
Query: 171 YWELQSGRELHNLKRVAPDIGSDPS-SMNVLSWSPDGETLAVP-GLKNDVVMYDRDTAEK 228
W+L G ++H K D S ++N +SP L + + +++++ T++K
Sbjct: 1590 VWDLIVGNQIHQFK--------DHSRAVNYCEFSPTANNLLMSCAWDSSIIIFN--TSDK 1639
Query: 229 -LF-SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
+F + R H +P+ WSP+G +A+SS D I IW+ + DR K
Sbjct: 1640 NIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLK 1689
Score = 174 (66.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/256 (22%), Positives = 113/256 (44%)
Query: 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCL 76
+ + CS+ D +++VT S + T + L + L L LA SP L
Sbjct: 1742 SVNHCSLSND--GNYIVTGSD-DATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLL 1798
Query: 77 ASGSIDHSVKLYKFPGGEFQTNITRF---TLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133
A G+ D +V+L+ + + T I + F+ SG+++A+ +D IK+ N
Sbjct: 1799 AVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQ 1858
Query: 134 DGSIARVL-KGHKGPVTGLAFDPNSE--YLASIDSIGTVIYWELQSGRELHNLKRVAPDI 190
+ K H P+ ++F+P +E ++ D T ++ + L
Sbjct: 1859 THKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTE------- 1911
Query: 191 GSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGK 250
GS + + + +SPDG+ +A + +Y + + LF L+G H + F ++SP+ K
Sbjct: 1912 GSTNTIKHCV-YSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKG-HTDWVNFCTFSPDSK 1969
Query: 251 YMATSSLDRQILIWDV 266
+ + D + +W++
Sbjct: 1970 KLVSGGWDFNLRVWNI 1985
Score = 172 (65.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 62/254 (24%), Positives = 115/254 (45%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ A++ + + + D + L ++ +H V +LS + + +GS D + K++
Sbjct: 1713 ILATTMKNDVLLFD-VNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTL 1771
Query: 93 GEFQTNITRFTLP----IRVLAFNKSGSMLAAAGDDEGIKLI----NTIDGSIARVLKGH 144
G T +T F +P LAF+ + +LA D ++L NTI +A+ L GH
Sbjct: 1772 G---TQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAK-LHGH 1827
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204
+T + F P+ +AS + W +Q+ + + +++ +DP +N +S++P
Sbjct: 1828 TRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAH----NDP--INCISFNP 1881
Query: 205 DGETLAVPGLKND--VVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL 262
E + +D ++ R T S G I +SP+GKY+AT S D I
Sbjct: 1882 TNECELI-SCSDDYSTKVWSRFTTSTTLSTEGS-TNTIKHCVYSPDGKYIATVSRDCSIA 1939
Query: 263 IWDVGKKLDIDRQK 276
++ K + R K
Sbjct: 1940 VYLCSSKKLLFRLK 1953
Score = 153 (58.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/254 (20%), Positives = 113/254 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILR-H-HRDGVTALALSPNSTCLASGSIDHSVKLYK 89
L+ +++ T+ + D + ++ + H H +T++ SP+ +AS S D +K++
Sbjct: 1797 LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWN 1856
Query: 90 FPGGEFQTNITR-FTLPIRVLAFNKSGSM-LAAAGDDEGIKLINTIDGSIARVLKGHKGP 147
+ + I + PI ++FN + L + DD K+ + S +G
Sbjct: 1857 VQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNT 1916
Query: 148 VTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE 207
+ + P+ +Y+A++ ++ + S + L LK +N ++SPD +
Sbjct: 1917 IKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLK-------GHTDWVNFCTFSPDSK 1969
Query: 208 TLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG 267
L G ++ +++ T ++L L+G H I ++ + KY+ ++S D + +WD
Sbjct: 1970 KLVSGGWDFNLRVWNIKTQKELLCLKG-HSSSIEKAFFTKDQKYIISASFDGSVKVWDAQ 2028
Query: 268 KKLDIDRQKFDDRI 281
+I + RI
Sbjct: 2029 FGSEITSLRHQTRI 2042
Score = 145 (56.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 71/317 (22%), Positives = 135/317 (42%)
Query: 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH-HRDGVTALALSPNSTC 75
A ++C + A++L+ + + +++I I + N+ + R H V + SP+ T
Sbjct: 1608 AVNYCE--FSPTANNLLMSCAWDSSIIIFNTS-DKNIFRNFRSAHSKPVNSCCWSPDGTL 1664
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLP-------IRVLAFNKSGSMLAAAGDDEGIK 128
+AS S D ++K++ P + + + I+ F+ + + A +
Sbjct: 1665 IASSSWDGTIKIWN-PFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVL 1723
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP 188
L + + V+ H V + + Y+ + T W G +L N +
Sbjct: 1724 LFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFL-IPG 1782
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD--RDTA-EKLFSLRGDHVQPICFLSW 245
D + N L++SP LAV V ++D +T ++ L G H + I +++
Sbjct: 1783 DCWA-----NCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHG-HTRAITSITF 1836
Query: 246 SPNGKYMATSSLDRQILIWDVGK-KLDIDRQK-FDDRICCMAWKPIGNALAVIDVMGKYG 303
SP+G +A++S D I +W+V K + +K +D I C+++ P N +I Y
Sbjct: 1837 SPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPT-NECELISCSDDYS 1895
Query: 304 --VWESVVPSSMKSPTE 318
VW S+ S TE
Sbjct: 1896 TKVWSRFTTSTTLS-TE 1911
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 133 (51.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 46 DPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG--EFQTNITRFT 103
D +P+ + H V A+ SP S LA+G +D VKL++ G EF+ +++
Sbjct: 307 DVRVPTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSN 366
Query: 104 LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI 163
I + F+ +G+ L AA +D ++ D + L GH G V F ++ + S
Sbjct: 367 AGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSG 426
Query: 164 DSIGTVIYWELQS 176
T+ W+L+S
Sbjct: 427 SHDRTLKLWDLRS 439
Score = 94 (38.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 33/140 (23%), Positives = 64/140 (45%)
Query: 171 YWELQSG---RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
+W+++S RE+ L ++ + +P +LS S D + L V L+ + V + +
Sbjct: 473 FWDIRSESVVREMELLGKITA-LDLNPERTELLSCSRD-DLLKVIDLRTNAVK--QTFSA 528
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCMA 285
F D + + +SP+G Y+A S + + +W V GK + ++ I +A
Sbjct: 529 PGFKCGSDWTRVV----FSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVA 584
Query: 286 WKPIGNALAVIDVMGKYGVW 305
W P G + +D + +W
Sbjct: 585 WAPSGLHVVSVDKGSRAVLW 604
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 170 (64.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 56/241 (23%), Positives = 103/241 (42%)
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165
+ + ++ +LA DD +K+ N + G+ H VT L F ++ L S
Sbjct: 392 VNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASL 451
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-DVVMYDRD 224
GTV W+ + N K P L+ P G+ + L + ++ ++ +
Sbjct: 452 DGTVRAWDF---KRYKNYKTYTTPT---PRQFVSLTADPSGDVVCAGTLDSFEIFVWSKK 505
Query: 225 TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV-GKKLDIDRQKFDDRICC 283
T + L G H P+ L +SP + +A+SS D + +WDV K ++ + + +
Sbjct: 506 TGQIKDILSG-HEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLT 564
Query: 284 MAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTEDIPSSRSNYNGLLLFDEEEKEPSTS 343
+A++P G LA + G+ W+++ M + I R G ++ D S+S
Sbjct: 565 VAFRPDGKQLASSTLDGQINFWDTIEGVLMYT----IEGRRDIAGGRVMTDRRSAANSSS 620
Query: 344 G 344
G
Sbjct: 621 G 621
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 62/235 (26%), Positives = 106/235 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE-FQTNITRFTLPIRVLAFNKSGSML 118
H + VTAL ++ L S S+D +V+ + F + ++T T L + SG ++
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVV 489
Query: 119 AAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL--- 174
A D I + + G I +L GH+ PV GL F P ++ LAS TV W++
Sbjct: 490 CAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFAS 549
Query: 175 ----QSGRELHNLKRVA--PD---IGSDPSSMNVLSWSP-DGETL-AVPGLKNDV----V 219
++ R H++ VA PD + S + W +G + + G + D+ V
Sbjct: 550 KGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG-RRDIAGGRV 608
Query: 220 MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR 274
M DR +A S G +C+ S +G Y+ + R I ++D+ ++ + R
Sbjct: 609 MTDRRSAAN--SSSGKCFTTLCY---SADGGYILAAGTSRYICMYDIADQVLLRR 658
Score = 60 (26.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 52 NLPKILRHHR----DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPI- 106
NLP+ + HR D V AL SPN +A G I V++++ PG F+ R LP
Sbjct: 80 NLPRRVVLHRITFKDKVGALKFSPNGKFIAVG-IGKLVEIWRSPG--FR----RAVLPFE 132
Query: 107 RVLAFNKS 114
RV F S
Sbjct: 133 RVRTFANS 140
Score = 38 (18.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 48 LLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88
+LP + + D V +L S +S L GS D + +L+
Sbjct: 128 VLPFERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARLF 168
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/261 (22%), Positives = 127/261 (48%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH--HRDGVTALALSPN 72
G+ + + W + + + +AS+ + T++ D + S +I R+ H + + ++ +S
Sbjct: 107 GHKGAILDLQWSRDSKTIFSASA-DMTLASWD--IESG-QRIRRYIGHEEVINSVEISKR 162
Query: 73 ST-CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLIN 131
L S S D ++ ++ P + + LPI +A +++G+ + + G D I + +
Sbjct: 163 GQEMLVSASDDGTMGIWD-PRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWD 221
Query: 132 TIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRV---AP 188
+I + GH +T L P+S+ L S TV W+++ + R AP
Sbjct: 222 IRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAP 281
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
+G + + + SW+P G+ +A VV++D T + L+ L G H + + ++PN
Sbjct: 282 -VGLEKNLIRA-SWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPG-HKGTVNDVRFTPN 338
Query: 249 GK-YMATSSLDRQILIWDVGK 268
+ + ++S DR +++ ++GK
Sbjct: 339 NEPIIVSASSDRNLMLGELGK 359
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 42/199 (21%), Positives = 88/199 (44%)
Query: 112 NKSGSMLAAAGDDEG-IKLINTIDGSIARVLK--GHKGPVTGLAFDPNSEYLASIDSIGT 168
+ S +++ ++G D ++ + G A +++ GH G V + FDP ++++AS +
Sbjct: 30 DNSAAVVKSSGQDGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRS 89
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228
++ W E + + + ++ L WS D +T+ + +D ++ ++
Sbjct: 90 ILLWNTYGQCENYGI------LSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQR 143
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-IWDVGKKLDIDRQKFDDRICCMAWK 287
+ G H + I + S G+ M S+ D + IWD +K ID + + I +A
Sbjct: 144 IRRYIG-HEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELPITAVAQS 202
Query: 288 PIGNALAVIDVMGKYGVWE 306
GN + + VW+
Sbjct: 203 EAGNEVFSGGIDNAIHVWD 221
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 176 (67.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 62/253 (24%), Positives = 115/253 (45%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
+I + +LVT + + I + D L + + H + +L S N + SGS
Sbjct: 365 TIAFSPDGKYLVTGTE-DRQIKLWD-LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D + +L+ G+ + + +A + + +A D+ I+ + ++ G++ L
Sbjct: 423 DRTARLWDVETGQCILKL-EIENGVTAIAISPNDQFIAVGSLDQIIR-VWSVSGTLVERL 480
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMN--- 198
+GHK V +AF P+S L S T+ WELQ+ R + L + P+ G ++
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSV-GLSAIKPE-GICKATYTGHT 538
Query: 199 --VLSW--SPDGETLAVPGLKN-DVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253
VLS SPD + G K+ + +D T + + +G H + + +SP+G+ A
Sbjct: 539 DFVLSVAVSPDSRW-GLSGSKDRSMQFWDLQTGQSYLTCQG-HKNSVISVCFSPDGRQFA 596
Query: 254 TSSLDRQILIWDV 266
+ S D + IW +
Sbjct: 597 SGSGDLRARIWSI 609
Score = 146 (56.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/162 (25%), Positives = 78/162 (48%)
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWS 203
H V + F N +YLA+ + ++ ++Q+G++L L +PD D + +++S
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQAANVF-DVQTGKKLFTLHEESPDPSRD-LYVRTIAFS 369
Query: 204 PDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILI 263
PDG+ L + ++D T + + G H Q I L +S NG+++ + S DR +
Sbjct: 370 PDGKYLVTGTEDRQIKLWDLSTQKVRYVFSG-HEQDIYSLDFSHNGRFIVSGSGDRTARL 428
Query: 264 WDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVW 305
WDV I + + ++ + +A P +AV + VW
Sbjct: 429 WDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVW 470
Score = 133 (51.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 37/163 (22%), Positives = 78/163 (47%)
Query: 104 LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI 163
L +R +AF+ G L +D IKL + + V GH+ + L F N ++ S
Sbjct: 361 LYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSG 420
Query: 164 DSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDR 223
T W++++G+ + L +I + + ++ SP+ + +AV L + ++
Sbjct: 421 SGDRTARLWDVETGQCILKL-----EI---ENGVTAIAISPNDQFIAVGSL-DQIIRVWS 471
Query: 224 DTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ + L G H + + +++SP+ + + SLD+ I +W++
Sbjct: 472 VSGTLVERLEG-HKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 60/257 (23%), Positives = 109/257 (42%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
V +A SP+ L +G+ D +KL+ + + + I L F+ +G + +
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI-YWELQSGRELHN 182
D +L + G L+ G VT +A PN +++A + S+ +I W + SG +
Sbjct: 423 DRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIA-VGSLDQIIRVWSV-SGTLVER 479
Query: 183 L---KRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-NDVVMYDRDTAEKLFSLR-GDHV 237
L K I P S +LS S D +T+ V L+ V E + H
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLD-KTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCMAWKPIGNALAV 295
+ ++ SP+ ++ + S DR + WD+ G+ + Q + + + + P G A
Sbjct: 539 DFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSY-LTCQGHKNSVISVCFSPDGRQFAS 597
Query: 296 IDVMGKYGVWESVVPSS 312
+ +W S+ P+S
Sbjct: 598 GSGDLRARIW-SIDPAS 613
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/228 (26%), Positives = 102/228 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
+ LR H V+ + +S + SGS D +++L+ G T + +AF+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSAD 116
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLK--GHKGPVTGLAFDPNSEYLASIDSIGTVIYW 172
+ + D+ IKL NT+ G ++ H V+ + F PNS I S G W
Sbjct: 117 NRQIVSGSRDKTIKLWNTL-GVCKYTIQDDSHTEWVSCVRFSPNSSN-PIIVSCG----W 170
Query: 173 E-LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
+ + L N K IG +N ++ SPDG A G +++D + + L++
Sbjct: 171 DKMVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 229
Query: 232 LRG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278
L G D + +CF SPN +Y ++ I IWD+ K+ +D + D
Sbjct: 230 LDGGDTINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVDELRQD 273
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/243 (23%), Positives = 108/243 (44%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93
+ S + T+ + D + + + H +D V ++A S ++ + SGS D ++KL+ G
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSADNRQIVSGSRDKTIKLWNTLGVC 138
Query: 94 EFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
++ T + + F N S ++ + G D+ +K+ N + + GH G + +
Sbjct: 139 KYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTV 198
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P+ AS G + W+L G+ L+ L G D ++N L +SP+ L
Sbjct: 199 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------GGD--TINALCFSPNRYWLCA 250
Query: 212 ---PGLKN-DV---VMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILI 263
P +K D+ ++ D + + + + P C L+WS +G+ + D I +
Sbjct: 251 ATGPSIKIWDLEGKIIVD-ELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRV 309
Query: 264 WDV 266
W V
Sbjct: 310 WQV 312
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 176 (67.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 56/260 (21%), Positives = 109/260 (41%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR-HHRDGVTALALSPNSTCLASGS 80
SI+W +V+ S I P + N KI + H + + L+ SP LAS +
Sbjct: 172 SIIWSHNEDWMVSGDDSGN-IKYWQPNM--NNVKIFKAHEQSKIRGLSFSPTDLKLASCA 228
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D +K++ F + ++ ++++ S++ + G D IK+ +
Sbjct: 229 DDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITT 288
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
L GHK V+ + ++ N ++ S S + +++++ +E+ K ++ L
Sbjct: 289 LHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEV-------TAL 341
Query: 201 SWSPDGETLAVPGLKNDVVMY-DRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDR 259
+ P E L V G K+ ++Y E + H + LSW P G +A+ S D
Sbjct: 342 ALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDH 401
Query: 260 QILIWDVGKKLDIDRQKFDD 279
W + D + K+++
Sbjct: 402 TTKFWSRNRPADTMKDKYNN 421
Score = 144 (55.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 51/246 (20%), Positives = 105/246 (42%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
+ ++ +P L +GS L+ F+T + +R + ++ + + + GD
Sbjct: 128 INCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVS-GD 186
Query: 124 DEG-IKLINTIDGSIARVLKGHK-GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181
D G IK ++ ++ K H+ + GL+F P LAS + W+ E +
Sbjct: 187 DSGNIKYWQPNMNNV-KIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDN 245
Query: 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241
L D+ +SW P + G N++ ++D +++ + +L G H +
Sbjct: 246 QLVGHGWDV-------KCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHG-HKSTVS 297
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDR-ICCMAWKPIGNALAVI-DVM 299
+ W+ NG ++ ++S D+ + ++D+ ++ K + + +A P L V D
Sbjct: 298 KVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKD 357
Query: 300 GKYGVW 305
GK W
Sbjct: 358 GKILYW 363
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 636 SKDKKSDENYWIVG 649
S DK YWIVG
Sbjct: 353 SGDKDGKILYWIVG 366
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 175 (66.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 64/285 (22%), Positives = 119/285 (41%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ SI W + HL+ + S + + + + + HR + +A + T
Sbjct: 283 GHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRGT 342
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLP--IRVLAFNKSGSMLAAAGDDEGIKLINT 132
S S D +KL+ G+ + T +P ++ N + A D+ I +T
Sbjct: 343 NFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWDT 402
Query: 133 IDGSIARVLKGHKGPVTGLAF-DPNSEYLASIDSIGTVIY-WELQSGRELHNLKRVAPDI 190
G I + H G V+ + F D N ++ + D I+ W++ ++K +A
Sbjct: 403 RSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPV-----DMKYIA--- 454
Query: 191 GSDPS--SMNVLSWSPDGETLAVPGLKNDVVMY---DRDTAEKLFSLRGDHVQPI-CFLS 244
DP+ SM ++ +P+G+ +A L N +V++ +R + + G V C L
Sbjct: 455 --DPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLD 512
Query: 245 WSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMA-WKP 288
+SP+ Y+ + D + IWD + + D +C A W P
Sbjct: 513 FSPDMSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHP 557
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 173 (66.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 65/271 (23%), Positives = 126/271 (46%)
Query: 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAG 122
G+TAL + N + +G ID +V LY + + I + + +A
Sbjct: 213 GITALDIKGNLSL--TGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISAS 270
Query: 123 DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYL--ASIDSIGTVIYWELQSGREL 180
D I++ + D S ++ H+ PVT ++ + + +Y+ AS DS YW R
Sbjct: 271 ADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDS-----YWAFSDIRSG 325
Query: 181 HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240
+L +V+ + GS +++ + + PDG V ++D + G H +
Sbjct: 326 KSLCKVSVEPGSQ-IAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPG-HTAAV 383
Query: 241 CFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMG 300
+++S NG Y+AT S D ++ +WD+ K ++ +++ +PI N+L+ D+ G
Sbjct: 384 RSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANEEK------QPI-NSLS-FDMTG 435
Query: 301 KY-GVW-ESVVPSSMKSPTEDIPSSRSNYNG 329
+ G+ + V +KS +E + S S+++G
Sbjct: 436 TFLGIGGQKVQVLHVKSWSEVV--SLSDHSG 464
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/217 (24%), Positives = 98/217 (45%)
Query: 51 SNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNIT---RFTLPIR 107
S+ I+ H+ VT ++L+ + + S S D G+ ++ + +
Sbjct: 283 SSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVH 342
Query: 108 VLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIG 167
+ F+ G + D +K+ + + ++A GH V +AF N YLA+ G
Sbjct: 343 SIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDG 402
Query: 168 TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227
V W+L R+L NLK A + + +N LS+ G L + G K V ++ + +E
Sbjct: 403 EVKLWDL---RKLKNLKTFANE---EKQPINSLSFDMTGTFLGIGGQKVQV-LHVKSWSE 455
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
+ SL DH P+ + + N + + T SLD+ + ++
Sbjct: 456 -VVSL-SDHSGPVTGVRFGENARSLVTCSLDKSLRVF 490
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 153 (58.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/200 (25%), Positives = 85/200 (42%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 139 CVFRYR-------GHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 190
Query: 239 PICFLSWSPNGKYMATSSLD 258
P+ + + PN +A+ S D
Sbjct: 191 PVNVVEFHPNEYLLASGSSD 210
Score = 151 (58.2 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 43/159 (27%), Positives = 77/159 (48%)
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
SG +LA GDD + L + + L GH PV + + E + + G++ W+
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
L++ + L L +I S L + P GE +A ++ ++D +F R
Sbjct: 92 LEAAKILRTLMGHKANICS-------LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKL 270
G H Q + L +SP+GK++A+++ D + +WD+ GK +
Sbjct: 145 G-HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Score = 150 (57.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 152 AFDPNSEYLAS 162
F PN LAS
Sbjct: 196 EFHPNEYLLAS 206
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST 74
G+ A+ CS+ + V + S +T I + D + R H V L SP+
Sbjct: 103 GHKANICSLDFHPYGE-FVASGSQDTNIKLWD-IRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 75 CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDD 124
LAS + DH+VKL+ G+ + T P+ V+ F+ + +LA+ D
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 115 (45.5 bits), Expect = 0.00059, P = 0.00059
Identities = 40/173 (23%), Positives = 76/173 (43%)
Query: 7 KLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTA 66
KL+E +A++ S++ + + L+ + +++ P N L H V +
Sbjct: 12 KLQEI--VAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVES 68
Query: 67 LALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEG 126
+ L+ + +GS S++++ + + I L F+ G +A+ D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 127 IKLINTI-DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
IKL + G + R +GH V L F P+ ++LAS TV W+L +G+
Sbjct: 129 IKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 168 (64.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 66/229 (28%), Positives = 104/229 (45%)
Query: 54 PK-ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN 112
PK L H V+ +S + S S D S++L++ G+ T + ++F+
Sbjct: 55 PKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFS 114
Query: 113 KSGSMLAAAGDDEGIKLINTI-DGSIARVLKGHKGPVTGLAFDPNSE--YLASIDSIGTV 169
+ + D IKL NT+ D KGH V+ + F PN + + S V
Sbjct: 115 ADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLV 174
Query: 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVM-YDRDTAEK 228
WEL S R L+ IG +N ++ SPDG +L G K+ V M +D + ++
Sbjct: 175 KVWELASCR----LQ--TDHIGHT-GYINTVTISPDG-SLCASGGKDGVTMLWDLNESKH 226
Query: 229 LFSLR-GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
L+SL GD + + F SPN +Y ++ I I+D+ KK +D K
Sbjct: 227 LYSLHAGDEIHALVF---SPN-RYWLCAATSSSITIFDLEKKSKVDELK 271
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 47/218 (21%), Positives = 96/218 (44%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAF--NKSGS 116
H + V +++ S ++ + SGS D ++KL+ G ++ T + + F N
Sbjct: 104 HTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNP 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
++ +AG D+ +K+ + GH G + + P+ AS G + W+L
Sbjct: 164 VIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNE 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
+ L++L A D ++ L +SP+ L + + ++D + K+ L+ ++
Sbjct: 224 SKHLYSLH--AGD------EIHALVFSPNRYWLCA-ATSSSITIFDLEKKSKVDELKPEY 274
Query: 237 VQ-------PICF-LSWSPNGKYMATSSLDRQILIWDV 266
++ P C L+WS +G+ + D +I W V
Sbjct: 275 IEKGKKSREPECVSLAWSADGQTLFAGYTDNKIRAWGV 312
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 45/183 (24%), Positives = 84/183 (45%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPN--STCLASGSIDHSVKLYKF 90
+ + S + TI + + L + H + V+ + SPN + + S D VK+++
Sbjct: 120 IVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWEL 179
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGP-VT 149
QT+ T I + + GS+ A+ G D G+ ++ ++ S + H G +
Sbjct: 180 ASCRLQTDHIGHTGYINTVTISPDGSLCASGGKD-GVTMLWDLNES-KHLYSLHAGDEIH 237
Query: 150 GLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS---DPSSMNVLSWSPDG 206
L F PN +L + S I+ +L+ ++ LK + G +P ++ L+WS DG
Sbjct: 238 ALVFSPNRYWLCAATSSSITIF-DLEKKSKVDELKPEYIEKGKKSREPECVS-LAWSADG 295
Query: 207 ETL 209
+TL
Sbjct: 296 QTL 298
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 172 (65.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/241 (22%), Positives = 109/241 (45%)
Query: 40 TTISIHDPLLPSNLPKILRHHRDGVTALAL-SPNSTCLASGSIDHSVKLYKFPGGEFQTN 98
TT + + L ++ P + G+ AL + S + + + +G D + ++ +
Sbjct: 201 TTDQVKNFLTVASHPGLHSASVPGILALDINSADHSKILTGGNDKNATVFNKDTEQMVAI 260
Query: 99 ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE 158
+ T I + ++ + + D I++ + +L+ H+GPVTGL+ P +
Sbjct: 261 LKGHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPTGD 320
Query: 159 YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDV 218
YL S S + ++++GR L + A ++G + + PDG + + V
Sbjct: 321 YLLSTSSDKHWAFSDIRTGRLLTKVIDTA-EVG-----LTTAQFHPDGLIFGTGTVDSQV 374
Query: 219 VMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278
++D + + G H PI +S+S NG Y+AT++ D + +WD+ K + + D
Sbjct: 375 KIWDLKEQSNVANFPG-HTGPISAISFSENGYYLATAADDACVKLWDLRKLKNFKTIQLD 433
Query: 279 D 279
D
Sbjct: 434 D 434
Score = 172 (65.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 62/254 (24%), Positives = 108/254 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISI-HDPLLPSNLPKILRHHRDGVTALALSPNS 73
G+ +++ ++T S + I I H P + L +LR H VT L+L P
Sbjct: 263 GHTKKITKVIYHPNEDTVITGSP-DMNIRIWHVPTSQTQL--LLRCHEGPVTGLSLHPTG 319
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTN-ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
L S S D G T I + + F+ G + D +K+ +
Sbjct: 320 DYLLSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGLIFGTGTVDSQVKIWDL 379
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS 192
+ S GH GP++ ++F N YLA+ V W+L R+L N K + D G
Sbjct: 380 KEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDL---RKLKNFKTIQLDDGY 436
Query: 193 DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYM 252
+ L + G LA+ G +DV +Y ++L + DH + + + +Y+
Sbjct: 437 EVKD---LCFDQSGTYLAIAG--SDVRVYLCKQWQEL-KVFNDHTALATGVRFGKHAQYL 490
Query: 253 ATSSLDRQILIWDV 266
A++S+DR + ++ +
Sbjct: 491 ASTSMDRTLKLYAI 504
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 177 (67.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 62/258 (24%), Positives = 106/258 (41%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN-KSGS-M 117
H D + S + +A+ S D VK++ G+ T + FN + G +
Sbjct: 655 HDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYL 714
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
LA DD IKL + D + GH V+ F PN +Y+AS + GTV W + S
Sbjct: 715 LATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSA 774
Query: 178 RELHNLK-----RVAPDIGSDPSSM-NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
EL ++ R A + D + SWS +T+ V KN ++++D T+ L
Sbjct: 775 NELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVA-KNKLLLFDVTTSNLLTQ 833
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLD--IDRQKFDDRICCMAWKPI 289
+ H I + + + +A + I +W++ K L D + + C+ +
Sbjct: 834 VIISHHSTIQYCDFCAGDELVAVALSHCSIELWNI-KSLSKVADCRGHTSWVHCVTFSSD 892
Query: 290 GNALAVIDVMGKYGVWES 307
G+ +WE+
Sbjct: 893 GSLFLTSSEDQTIRIWET 910
Score = 165 (63.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 67/260 (25%), Positives = 116/260 (44%)
Query: 4 RSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDG 63
R + REA++ + C D Q + +S+ + I + + L N L+ H++
Sbjct: 996 RVLTSREAYR--TSVQHCRFTTDCQT---LISSAHDAVIQVWNWQL--NECVFLKGHKEA 1048
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
+ A NS L S S D +VK++ G+ + + + A + GS ++
Sbjct: 1049 IKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSA 1107
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ K+ + S+ LKGH+ V AF P+++ LA+ D G + W++ +G LH
Sbjct: 1108 DKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFC 1167
Query: 184 KRVAPDIGSDPSS---MNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL--FSLRGDHVQ 238
V D +P+ + LS+SPD + L G + +D T E L F G +++
Sbjct: 1168 SSVTVD-EEEPTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTGESLQTFYTNGTNLK 1224
Query: 239 PICFLSWSPN-GKYMATSSL 257
I SPN Y+ +L
Sbjct: 1225 SIHV---SPNFDVYVTVDNL 1241
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 177 (67.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 62/258 (24%), Positives = 106/258 (41%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN-KSGS-M 117
H D + S + +A+ S D VK++ G+ T + FN + G +
Sbjct: 656 HDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYL 715
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
LA DD IKL + D + GH V+ F PN +Y+AS + GTV W + S
Sbjct: 716 LATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSA 775
Query: 178 RELHNLK-----RVAPDIGSDPSSM-NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
EL ++ R A + D + SWS +T+ V KN ++++D T+ L
Sbjct: 776 NELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVA-KNKLLLFDVTTSNLLTQ 834
Query: 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLD--IDRQKFDDRICCMAWKPI 289
+ H I + + + +A + I +W++ K L D + + C+ +
Sbjct: 835 VIISHHSTIQYCDFCAGDELVAVALSHCSIELWNI-KSLSKVADCRGHTSWVHCVTFSSD 893
Query: 290 GNALAVIDVMGKYGVWES 307
G+ +WE+
Sbjct: 894 GSLFLTSSEDQTIRIWET 911
Score = 165 (63.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 67/260 (25%), Positives = 116/260 (44%)
Query: 4 RSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDG 63
R + REA++ + C D Q + +S+ + I + + L N L+ H++
Sbjct: 997 RVLTSREAYR--TSVQHCRFTTDCQT---LISSAHDAVIQVWNWQL--NECVFLKGHKEA 1049
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
+ A NS L S S D +VK++ G+ + + + A + GS ++
Sbjct: 1050 IKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSA 1108
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ K+ + S+ LKGH+ V AF P+++ LA+ D G + W++ +G LH
Sbjct: 1109 DKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFC 1168
Query: 184 KRVAPDIGSDPSS---MNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL--FSLRGDHVQ 238
V D +P+ + LS+SPD + L G + +D T E L F G +++
Sbjct: 1169 SSVTVD-EEEPTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTGESLQTFYTNGTNLK 1225
Query: 239 PICFLSWSPN-GKYMATSSL 257
I SPN Y+ +L
Sbjct: 1226 SIHV---SPNFDVYVTVDNL 1242
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 177 (67.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 81/325 (24%), Positives = 136/325 (41%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG----EFQTNITRFTLPIRVLAFN 112
L+ H + V A SP+ +A+ + D VKL+ G EF+ I F
Sbjct: 656 LQAHEEDVLCCAFSPDDRHIATCASDKKVKLWNVERGVLIREFEVEHEE---QINHCQFT 712
Query: 113 KSGS--MLAAAGDDE--GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168
+G +LA +D+ KL N + + GH PV F PN YLA+ S G+
Sbjct: 713 NTGRRVLLATCSNDKFTNTKLWNPNKKTSQNTMFGHMEPVNHCCFSPNDLYLATSSSDGS 772
Query: 169 VIYWELQSGRELHNLK--RVAPDIGSDPSSMNVLS-WSPDGETLAVPGLKNDVVMYDRDT 225
+ +E+ S E ++ P+ + +M S WS DG + + +N V ++D +T
Sbjct: 773 LKLFEVSSANEWKSIDVDSFFPESDEEIKAMVKCSTWSADGSQI-ICAARNTVFVFDVET 831
Query: 226 AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV-GKKLDIDRQKFDDRICCM 284
++ L L+ + I F PN +A + + +W+ K + + C+
Sbjct: 832 SDLLLELKTSRLSTIQFCHACPNSSLLAVALSHYTVELWNFESSKKKAECSGHLSWVHCV 891
Query: 285 AWKPIGNALAVIDVMGKYGVWES--VVPSS---MKSPTEDIPSSRSNYNGLLLFDEEEKE 339
+ P G+ L +WE+ V SS +K T D+ S S+ ++ D +
Sbjct: 892 QFSPDGSLLLSSSDDQTIRLWETDRVHTSSAVALKRDT-DVLFSHSDAT-IIAPDSSNRL 949
Query: 340 PSTSGSLSDLGEDSHGESEMPSRKR 364
SGS + +S E+ SR R
Sbjct: 950 QVLSGSTGAVVLESE---ELSSRIR 971
Score = 128 (50.1 bits), Expect = 0.00049, P = 0.00049
Identities = 44/198 (22%), Positives = 89/198 (44%)
Query: 111 FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
F+K GS +A+ G + +++ + G L+ H+ V AF P+ ++A+ S V
Sbjct: 626 FSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPDDRHIATCASDKKVK 685
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKND----VVMYDRDTA 226
W ++ G + + V + +N ++ G + + ND +++ +
Sbjct: 686 LWNVERGVLIREFE-VEHE-----EQINHCQFTNTGRRVLLATCSNDKFTNTKLWNPNKK 739
Query: 227 EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-----KKLDIDR--QKFDD 279
++ G H++P+ +SPN Y+ATSS D + +++V K +D+D + D+
Sbjct: 740 TSQNTMFG-HMEPVNHCCFSPNDLYLATSSSDGSLKLFEVSSANEWKSIDVDSFFPESDE 798
Query: 280 RIC----CMAWKPIGNAL 293
I C W G+ +
Sbjct: 799 EIKAMVKCSTWSADGSQI 816
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 61/228 (26%), Positives = 100/228 (43%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H V + LS + SGS D ++L+ G T + +AF+
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 117 MLAAAGDDEGIKLINTIDG---SIARVLKGHKGPVTGLAFDPNS--EYLASIDSIGTVIY 171
+ +A D IKL NT+ +I+ +GH+ V+ + F PN+ + S TV
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 178
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231
W L N K + + ++ ++ SPDG A G V+++D +KL+S
Sbjct: 179 WNLS------NCK-LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 231
Query: 232 LRGDHV-QPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278
L + V +CF SPN +Y ++ + I IWD+ K ++ K D
Sbjct: 232 LEANSVIHALCF---SPN-RYWLCAATEHGIKIWDLESKSIVEDLKVD 275
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 53/231 (22%), Positives = 105/231 (45%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIR----VLA 110
+ + H +D V ++A S ++ + S S D ++KL+ G E + I+ R +
Sbjct: 100 RFVGHTKD-VLSVAFSLDNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVR 157
Query: 111 F--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168
F N + +A D+ +K+ N + + L GH G V+ +A P+ AS G
Sbjct: 158 FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 217
Query: 169 VIYWELQSGRELHNLKR--VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA 226
V+ W+L G++L++L+ V + P+ + + + G + + L++ ++ D
Sbjct: 218 VLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHG--IKIWDLESKSIVEDLKVD 275
Query: 227 EKLFSLRGDHVQPI--------CF-LSWSPNGKYMATSSLDRQILIWDVGK 268
K + + D+ P C L+WS +G + + D I +W +G+
Sbjct: 276 LKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 326
Score = 118 (46.6 bits), Expect = 0.00088, P = 0.00088
Identities = 53/225 (23%), Positives = 91/225 (40%)
Query: 57 LRHHRDGVTALALS-PNSTCLASGSIDHSVKLYKFPG-----GEFQTNITRFTLPIRVLA 110
+R H D VTA+A N+ + S S D S+ L+K G Q +T + + +
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 111 FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
+ G + D ++L + G R GH V +AF ++ + S T+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSS-MNVLSWSPDG--ETLAVPGLKNDVVMYDRDTAE 227
W L K + G ++ + +SP+ T+ V +++
Sbjct: 131 LWNT-----LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC- 184
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKL 270
KL S H + ++ SP+G A+ D +L+WD+ GKKL
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 229
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 172 (65.6 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H V + PNS +A+GS D +V+L+ G T P+ LAF+ +G LA
Sbjct: 437 HLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLA 496
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+AG+D+ +KL + G + + L+GH ++ L+F +S +AS TV W++++
Sbjct: 497 SAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
Score = 163 (62.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 37 SSETTISIHDPLLPSNLPKIL-RHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95
S ++T+ D L S +L R H V + +SP S ++ S D + +L+ F +
Sbjct: 373 SEDSTVRYWD--LKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSF-ARTY 429
Query: 96 QTNITRFTLP-IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154
+ L + + F+ + + +A D+ ++L +T G+ R+ GH+GPV LAF
Sbjct: 430 PLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFS 489
Query: 155 PNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL 214
PN +YLAS + W+L SG +L+ I S LS+S D +A +
Sbjct: 490 PNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISS-------LSFSQDSSLVASASM 542
Query: 215 KNDVVMYD 222
N V ++D
Sbjct: 543 DNTVRVWD 550
Score = 141 (54.7 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 51/212 (24%), Positives = 89/212 (41%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
K LR H V A +++ L S S D +V+ + P+ + +
Sbjct: 348 KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPC 407
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+ A D +L + R+ GH V + F PNS Y+A+ + TV W
Sbjct: 408 SLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWST 467
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234
+ G + R+ + L++SP+G+ LA G + ++D + LRG
Sbjct: 468 RQGASV----RL---FTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRG 520
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
H I LS+S + +A++S+D + +WD+
Sbjct: 521 -HTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 54/242 (22%), Positives = 105/242 (43%)
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E +T + + P+ AF S L + +D ++ + + + +GH PV +
Sbjct: 344 GSEIKT-LRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDV 402
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
P S Y ++ T W S + L+ A + S ++ + + P+ +A
Sbjct: 403 DVSPCSLYFSTASHDRTARLW---SFARTYPLRLYAGHL----SDVDCVKFHPNSNYIAT 455
Query: 212 PGLKNDVVMYD-RDTAE-KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269
V ++ R A +LF+ H P+ L++SPNGKY+A++ D+++ +WD+
Sbjct: 456 GSTDKTVRLWSTRQGASVRLFT---GHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASG 512
Query: 270 -LDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKSPTEDIPSSR-SNY 327
L D + D I +++ + +A + VW+ + + +PT+ S Y
Sbjct: 513 GLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWD-IRNAHGSAPTDGCSSELIGQY 571
Query: 328 NG 329
G
Sbjct: 572 TG 573
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 176 (67.0 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 58/246 (23%), Positives = 105/246 (42%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ + ++ T+ + L +I + H D V A S + +A+ S+D VK++
Sbjct: 630 IASCGADKTLQVFKAETGEKLLEI-KAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMT 688
Query: 93 GEFQTNITRFTLPIRVLAF-NKSGSMLAAAGDDEG-IKLINTIDGSIARVLKGHKGPVTG 150
GE + + F N S +L A G + +KL + + GH V
Sbjct: 689 GELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNH 748
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELH--NLKRVAPDIGSDPSSMNVL----SWSP 204
F P+ + LAS + GT+ W+ S E N+K+ ++ M V+ SWS
Sbjct: 749 CRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSA 808
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-I 263
DG + V KN + ++D T+ L + H I + +SP ++A +L + + +
Sbjct: 809 DGARIMVAA-KNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQN-HLAVVALSQYCVEL 866
Query: 264 WDVGKK 269
W+ +
Sbjct: 867 WNTDSR 872
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 166 (63.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 60/227 (26%), Positives = 101/227 (44%)
Query: 54 PK-ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN 112
PK L+ H V+ +S + S S D +++L++ G T + ++F+
Sbjct: 55 PKRSLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFS 114
Query: 113 KSGSMLAAAGDDEGIKLINTI-DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
+ + D IKL NT+ D KGH V+ + F PN + + S G
Sbjct: 115 ADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSS-G---- 169
Query: 172 WE-LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W+ L EL + K IG +N ++ SPDG A G +++D + ++ L+
Sbjct: 170 WDKLVKVWELSSCKLQTDHIGHT-GYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLY 228
Query: 231 SLRG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276
SL D + + F SPN +Y ++ I+I+D+ KK +D K
Sbjct: 229 SLNANDEIHALVF---SPN-RYWLCAATASSIIIFDLEKKSKVDELK 271
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 49/219 (22%), Positives = 97/219 (44%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR--FTLPIRVLAF--NKSG 115
H + V +++ S ++ + SGS D S+KL+ G + + IT + + + F N
Sbjct: 104 HTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLG-DCKYTITEKGHSEWVSCVRFSPNPQN 162
Query: 116 SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
++ ++G D+ +K+ + GH G + + P+ AS GT + W+L
Sbjct: 163 PVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLN 222
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD 235
+ L++L A D ++ L +SP+ L + ++++D + K+ L+ +
Sbjct: 223 ESKHLYSLN--AND------EIHALVFSPNRYWLCA-ATASSIIIFDLEKKSKVDELKPE 273
Query: 236 HV-------QPICF-LSWSPNGKYMATSSLDRQILIWDV 266
+P C L+WS +G+ + D I W V
Sbjct: 274 FAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRAWGV 312
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 158
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 159 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 210
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 211 EHVVECISWAPESSYSSIS 229
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 57 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 115
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 116 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 175
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 176 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 235
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 236 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 292
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 293 DDKTLRVWDYKNK 305
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 172 (65.6 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 56/202 (27%), Positives = 95/202 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P + +ASGS+D +KL+
Sbjct: 77 LIVAGSQSGSIRVWD-LEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
T +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVV 195
Query: 152 AFDPNSEY-LASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
F P SEY LA T+ +W+L+ + H V I + + + + ++PDG L
Sbjct: 196 EFHP-SEYPLAGSPVHRTIRFWDLE---KFH----VVSCIEEEATPVRCILFNPDGCCL- 246
Query: 211 VPGLKNDVVMYDRDTAEKLFSL 232
G ++ + +Y + E+ F +
Sbjct: 247 YGGFQDSLRVYGWEP-ERCFDV 267
Score = 171 (65.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 63/252 (25%), Positives = 109/252 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L ++ LA+G D V ++ ++T T PI L + ++
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI-YWELQSG 177
A I++ + I R L GHK + L F P ++AS S+ T I W+++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVAS-GSLDTDIKLWDVRRK 137
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
+ K S ++ L +SPDG+ LA + V ++D + +F G H
Sbjct: 138 GCIFKYK-------SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG-HY 189
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNAL--A 294
P+ + + P+ +A S + R I WD+ K + ++ + C+ + P G L
Sbjct: 190 GPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG 249
Query: 295 VIDVMGKYGVWE 306
D + YG WE
Sbjct: 250 FQDSLRVYG-WE 260
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 167 (63.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 59/258 (22%), Positives = 115/258 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 165
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + I F +VLA FN + + + G D IK+
Sbjct: 166 QLVC--TGSDDGTVKLWDI---RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ R+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQG 280
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
++ + ++ SWSPDG +A V ++D + L+ L G H I +++ P+
Sbjct: 281 NVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPD 339
Query: 249 GKYMATSSLDRQILIWDV 266
+ ++S D+++ + ++
Sbjct: 340 EPIILSASSDKRLYMGEI 357
Score = 166 (63.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 57/263 (21%), Positives = 109/263 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V PN + LAS D + L+ G + + + + L +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 182 IR--------KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + +WDV +R F+ +
Sbjct: 234 G-HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC 292
Query: 285 AWKPIGNALAVIDVMGKYGVWES 307
+W P G+ +A VW++
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDT 315
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK--- 89
+ + + I + D L + L +R H D VT L+LS + L S ++D++V+++
Sbjct: 209 IISGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 90 FPGGE-----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
F E FQ N+ F + +++ GS +AA D + + +T I L GH
Sbjct: 268 FAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 327
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
G + +AF P+ + S S + E+Q
Sbjct: 328 AGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 167 (63.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 57/263 (21%), Positives = 109/263 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V PN + LAS D + L+ G + + + + L +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 182 IR--------KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + +WDV +R F+ +
Sbjct: 234 G-HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 285 AWKPIGNALAVIDVMGKYGVWES 307
+W P G+ +A VW++
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDT 315
Score = 164 (62.8 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 57/258 (22%), Positives = 115/258 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 165
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + + F +VLA FN + + + G D IK+
Sbjct: 166 QLVC--TGSDDGTVKLWDI---RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ ++
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQG 280
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
++ + ++ SWSPDG +A V ++D + L+ L G H I +++ P+
Sbjct: 281 NVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPG-HAGSINEVAFHPD 339
Query: 249 GKYMATSSLDRQILIWDV 266
+ ++S D+++ + ++
Sbjct: 340 EPIILSASSDKRLYMGEI 357
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 39/151 (25%), Positives = 70/151 (46%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK--- 89
+ + + I + D L + L +R H D VT L+LS + L S ++D++V+++
Sbjct: 209 IISGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 90 FPGGE-----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
F E FQ N+ F + +++ GS +AA D + + +T + L GH
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGH 327
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
G + +AF P+ + S S + E+Q
Sbjct: 328 AGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 181 (68.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 56/222 (25%), Positives = 97/222 (43%)
Query: 109 LAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168
LA++ GS + A +D IK+ + G + H VT + F + + S GT
Sbjct: 351 LAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGT 410
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-DVVMYDRDTAE 227
V W+L R G++ N L+ P GE + L N D+ ++ T +
Sbjct: 411 VRAWDLIRYRNFRTFT------GTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQ 464
Query: 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV-GKKLDIDRQKFDDRICCMAW 286
L +L G H P+ LS+S +A++S D+ I IW + G+ ++ + + ++
Sbjct: 465 LLDALSG-HEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSM 523
Query: 287 KPIGNALAVIDVMGKYGVW--ESVVPSSMKSPTEDIPSSRSN 326
+P G +AV + G+ ++ E +DI S R N
Sbjct: 524 RPDGKEVAVSTLKGQISIFNIEDAKQVGNIDCRKDIISGRFN 565
Score = 43 (20.2 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 18/84 (21%), Positives = 32/84 (38%)
Query: 8 LREAHKCGNAASFCSILWDQQAHHLVTASSS-ETTISIHDPLLPSNLPKILRHHRDGVTA 66
+R G+ S+ W Q + ++T S I D + HRD V
Sbjct: 137 VRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMG 196
Query: 67 LALSPNSTCLASGSIDHSVKLYKF 90
S + + + S D +V +++F
Sbjct: 197 AFFSHDQEKIYTVSKDGAVFVWEF 220
>UNIPROTKB|Q9AV81 [details] [associations]
symbol:PUB72 "U-box domain-containing protein 72"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618 GO:GO:0009507
GO:GO:0046686 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0042742 eggNOG:COG2319 EMBL:DP000086
EMBL:AP008216 EMBL:CM000147 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:AC022457 EMBL:AK064778
RefSeq:NP_001064804.1 UniGene:Os.37656 ProteinModelPortal:Q9AV81
STRING:Q9AV81 PRIDE:Q9AV81 GeneID:4348844 KEGG:dosa:Os10t0466300-01
KEGG:osa:4348844 Gramene:Q9AV81 Uniprot:Q9AV81
Length = 527
Score = 177 (67.4 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 59/239 (24%), Positives = 104/239 (43%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ A T IS H PL +N P G+ ++ + P+ +A+G ID + L+ P
Sbjct: 202 IDAIERYTQISSH-PLHKTNKP--------GILSMDIHPSKDIIATGGIDTNAVLFDRPS 252
Query: 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLIN-TIDGSI--ARVLKGHKGPVT 149
G+ +T + I L F + D+ +K+ + +G+ LK H V
Sbjct: 253 GQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVE 312
Query: 150 GLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL 209
+ +Y + T ++++ SG L +V G + S+ PDG L
Sbjct: 313 AVTVHATQKYFVTASKDNTWCFYDIPSGS---CLTQVGESSGQE--GYTSASFHPDGLIL 367
Query: 210 AVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
+ V ++D T + G HV P+ +S+S NG ++AT++LD + +WD+ K
Sbjct: 368 GTGTTEAVVKIWDVKTQSNVAKFEG-HVGPVTAMSFSENGYFLATAALDG-VKLWDLRK 424
Score = 141 (54.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 57/242 (23%), Positives = 101/242 (41%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKI--LRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89
L S++ T+ I N I L+ H V A+ + + S D++ Y
Sbjct: 277 LFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYD 336
Query: 90 FPGGEFQTNITRFTLP--IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGP 147
P G T + + +F+ G +L + +K+ + S +GH GP
Sbjct: 337 IPSGSCLTQVGESSGQEGYTSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGP 396
Query: 148 VTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE 207
VT ++F N +LA+ ++ V W+L R+L N + ++P P+ N + + G
Sbjct: 397 VTAMSFSENGYFLATA-ALDGVKLWDL---RKLRNFRTISPYDSDTPT--NSVEFDFSGS 450
Query: 208 TLAVPGLKNDV-----VMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL 262
LAV G V V + + + L L G + + + + KY+A S+DR +
Sbjct: 451 YLAVGGSDTRVYQVANVKLEWNLVKTLPDLSG--TGKVTNVKFGTDAKYIAVGSMDRNLR 508
Query: 263 IW 264
I+
Sbjct: 509 IF 510
Score = 40 (19.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 461 DFHDTGRGPRVPSMTDYFGFTMASLNENGSVFANP 495
D TG+ V TD + S++ N +F +P
Sbjct: 479 DLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGHP 513
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 151 (58.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 43/159 (27%), Positives = 77/159 (48%)
Query: 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
SG +LA GDD + L + + L GH PV + + E + + G++ W+
Sbjct: 36 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 95
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
L++ + L L +I S L + P GE +A ++ ++D +F R
Sbjct: 96 LEAAKILRTLMGHKANICS-------LDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 148
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDV--GKKL 270
G H Q + L +SP+GK++A+++ D + +WD+ GK +
Sbjct: 149 G-HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 186
Score = 148 (57.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L+ A S +I + D L + + + L H+ + +L P +ASGS D ++KL+
Sbjct: 81 LIVAGSQSGSIRVWD-LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 139
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
+ +R L F+ G LA+A DD +KL + G + GH GPV +
Sbjct: 140 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 199
Query: 152 AFDPNSEYL 160
F PN EYL
Sbjct: 200 EFHPN-EYL 207
Score = 144 (55.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/194 (24%), Positives = 83/194 (42%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L S LA+G D V L+ ++T T P+ + N ++
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 82
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A I++ + I R L GHK + L F P E++AS + W+++
Sbjct: 83 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 142
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ + ++ L +SPDG+ LA + V ++D TA K+ S H
Sbjct: 143 CVFRYR-------GHSQAVRCLRFSPDGKWLASAADDHTVKLWDL-TAGKMMSEFPGHTG 194
Query: 239 PICFLSWSPNGKYM 252
P+ + + PN +Y+
Sbjct: 195 PVNVVEFHPN-EYL 207
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 37/164 (22%), Positives = 72/164 (43%)
Query: 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTC 75
+A++ S++ + + L+ + +++ P N L H V ++ L+
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVESVRLNTPEEL 81
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI-D 134
+ +GS S++++ + + I L F+ G +A+ D IKL +
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 141
Query: 135 GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
G + R +GH V L F P+ ++LAS TV W+L +G+
Sbjct: 142 GCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 184
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 166 (63.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 57/263 (21%), Positives = 109/263 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V PN + LAS D + L+ G + + + + L +N
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 181 IR--------KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + +WDV +R F+ +
Sbjct: 233 G-HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 291
Query: 285 AWKPIGNALAVIDVMGKYGVWES 307
+W P G+ +A VW++
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDT 314
Score = 164 (62.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 58/258 (22%), Positives = 115/258 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 164
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + I F +VLA FN + + + G D IK+
Sbjct: 165 QLVC--TGSDDGTVKLWDI---RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ ++
Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQG 279
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
++ + ++ SWSPDG +A V ++D + L+ L G H I +++ P+
Sbjct: 280 NVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPD 338
Query: 249 GKYMATSSLDRQILIWDV 266
+ ++S D+++ + ++
Sbjct: 339 EPIIISASSDKRLYMGEI 356
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK--- 89
+ + + I + D L + L +R H D VT L+LS + L S ++D++V+++
Sbjct: 208 IISGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Query: 90 FPGGE-----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
F E FQ N+ F + +++ GS +AA D + + +T I L GH
Sbjct: 267 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 326
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
G + +AF P+ + S S + E+Q
Sbjct: 327 AGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 166 (63.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 57/263 (21%), Positives = 109/263 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V PN + LAS D + L+ G + + + + L +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 182 IR--------KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + +WDV +R F+ +
Sbjct: 234 G-HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 285 AWKPIGNALAVIDVMGKYGVWES 307
+W P G+ +A VW++
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDT 315
Score = 164 (62.8 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 58/258 (22%), Positives = 115/258 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 165
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + I F +VLA FN + + + G D IK+
Sbjct: 166 QLVC--TGSDDGTVKLWDI---RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ ++
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQG 280
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
++ + ++ SWSPDG +A V ++D + L+ L G H I +++ P+
Sbjct: 281 NVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPD 339
Query: 249 GKYMATSSLDRQILIWDV 266
+ ++S D+++ + ++
Sbjct: 340 EPIILSASSDKRLYMGEI 357
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK--- 89
+ + + I + D L + L +R H D VT L+LS + L S ++D++V+++
Sbjct: 209 IISGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 90 FPGGE-----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
F E FQ N+ F + +++ GS +AA D + + +T I L GH
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 327
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
G + +AF P+ + S S + E+Q
Sbjct: 328 AGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 166 (63.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 57/263 (21%), Positives = 109/263 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V PN + LAS D + L+ G + + + + L +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 182 IR--------KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + +WDV +R F+ +
Sbjct: 234 G-HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 285 AWKPIGNALAVIDVMGKYGVWES 307
+W P G+ +A VW++
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDT 315
Score = 164 (62.8 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 58/258 (22%), Positives = 115/258 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 165
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + I F +VLA FN + + + G D IK+
Sbjct: 166 QLVC--TGSDDGTVKLWDI---RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ ++
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQG 280
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
++ + ++ SWSPDG +A V ++D + L+ L G H I +++ P+
Sbjct: 281 NVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPD 339
Query: 249 GKYMATSSLDRQILIWDV 266
+ ++S D+++ + ++
Sbjct: 340 EPIILSASSDKRLYMGEI 357
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK--- 89
+ + + I + D L + L +R H D VT L+LS + L S ++D++V+++
Sbjct: 209 IISGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 90 FPGGE-----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
F E FQ N+ F + +++ GS +AA D + + +T I L GH
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 327
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
G + +AF P+ + S S + E+Q
Sbjct: 328 AGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 165 (63.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 58/242 (23%), Positives = 108/242 (44%)
Query: 33 VTASSSETTISIH-----DPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKL 87
+ +SS + T+ + D P + L+ H V + +S + SGS D++++L
Sbjct: 37 IISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRL 96
Query: 88 YKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKG---H 144
+ G T + +AF+ + + D IK+ NT+ G L+G H
Sbjct: 97 WDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTL-GECKFTLEGPEAH 155
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204
+ V+ + F PN+ + S V W+++S + H L +N ++ SP
Sbjct: 156 QDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLT-------DHTGYVNTVTISP 208
Query: 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264
DG A G +++ + + L+ L + I L++SPN KY +++ D +I+IW
Sbjct: 209 DGSLCASGGKDTFACLWELSSGKPLYKLEARNT--INALAFSPN-KYWLSAATDDKIIIW 265
Query: 265 DV 266
D+
Sbjct: 266 DL 267
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/206 (24%), Positives = 87/206 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNS 73
G+ S+ + +++ S + TI + + L + H+D V+ + SPN+
Sbjct: 110 GHTQDVMSVAFSSDNRQIISGSR-DATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNT 168
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133
+ SGS D+ VK++ + +T T + + + GS+ A+ G D L
Sbjct: 169 PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELS 228
Query: 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL----KRVAPD 189
G L+ + + LAF PN +L++ +I W+L + + L + K A D
Sbjct: 229 SGKPLYKLEA-RNTINALAFSPNKYWLSAATD-DKIIIWDLLTKQVLAEIVPEVKEQAFD 286
Query: 190 IG----SDPSSMNVLS--WSPDGETL 209
S P + LS WS DG L
Sbjct: 287 SKKKKESKPKAPACLSLAWSADGSVL 312
Score = 118 (46.6 bits), Expect = 0.00089, P = 0.00089
Identities = 49/236 (20%), Positives = 102/236 (43%)
Query: 60 HRDGVTALALSP-NSTCLASGSIDHSVKLYKF-PG-----GEFQTNITRFTLPIRVLAFN 112
H VT++A+SP N + S S D +V +++ P G+ ++ + ++ + +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVIS 79
Query: 113 KSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYW 172
G + D ++L + G R+ KGH V +AF ++ + S T+ W
Sbjct: 80 HDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVW 139
Query: 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
G L+ P+ D ++ + +SP+ T+ N V ++D + + +L
Sbjct: 140 NTL-GECKFTLE--GPEAHQD--WVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Query: 233 RGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKP 288
DH + ++ SP+G A+ D +W++ + + + + I +A+ P
Sbjct: 195 T-DHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSP 249
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 146 (56.5 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141
D +V+L+ G T P+ L+F+ +G LA+AG+D+ +KL + G++ + L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+GH +T LAF P+S +AS +V W+++S
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 95
Score = 132 (51.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 33/103 (32%), Positives = 52/103 (50%)
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ ++L + G+ R+ GH+GPV L+F PN +YLAS + W+L SG L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 184 KRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD-RDT 225
+ S+ L++SPD +A + N V ++D R T
Sbjct: 61 R-------GHTDSITSLAFSPDSGLIASASMDNSVRVWDIRST 96
Score = 104 (41.7 bits), Expect = 0.00033, P = 0.00033
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 236 HVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDRICCMAWKPIGNALA 294
H P+ LS+SPNGKY+A++ D+++ +WD+ L + + D I +A+ P +A
Sbjct: 21 HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA 80
Query: 295 VIDVMGKYGVWE 306
+ VW+
Sbjct: 81 SASMDNSVRVWD 92
Score = 103 (41.3 bits), Expect = 0.00063, P = 0.00063
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 200 LSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDR 259
LS+SP+G+ LA G + ++D + LRG H I L++SP+ +A++S+D
Sbjct: 28 LSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG-HTDSITSLAFSPDSGLIASASMDN 86
Query: 260 QILIWDV 266
+ +WD+
Sbjct: 87 SVRVWDI 93
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 171 (65.3 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 62/256 (24%), Positives = 107/256 (41%)
Query: 49 LPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTN--ITRFTL-- 104
+P + ++LR H V A +P+ LASGS D + +++ +N + R +
Sbjct: 343 IPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQK 402
Query: 105 -----P----IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP 155
P + L +N GS+LA G +G I DG +A L HKGP+ L ++
Sbjct: 403 GGAEVPSNKDVTSLDWNCDGSLLAT-GSYDGYARIWKTDGRLASTLGQHKGPIFALKWNK 461
Query: 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215
Y+ S T I W+ +G+ S P+ ++V W + + A
Sbjct: 462 CGNYILSAGVDKTTIIWDASTGQCTQQFA-----FHSAPA-LDV-DWQTN-QAFASCSTD 513
Query: 216 NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDR 274
+ + E + + +G H + + W P G+ +A+ S D + IW + + + D
Sbjct: 514 QRIHVCRLGVNEPIKTFKG-HTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDL 572
Query: 275 QKFDDRICCMAWKPIG 290
Q I + W P G
Sbjct: 573 QAHSKEIYTIKWSPTG 588
Score = 160 (61.4 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 71/268 (26%), Positives = 115/268 (42%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDP---LLPSNLPKILRHHRDGVTALALSP 71
GNA + + D A T +S T+ S+ P L P+ + + D A A
Sbjct: 222 GNAGNANATSTDDAASSTSTNGNSSTSSSVEQPTSGLTPAG-GTVSTSNPD---AAASGG 277
Query: 72 NSTCLASGSIDHSVKL-YKFPGGEFQTNIT--RFTLPIRVLAFNKSG-----SMLAAAGD 123
ST S + +V + G Q+ + + + P ++ + SG + L
Sbjct: 278 ASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSGGAGTPAALVPMDI 337
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN- 182
DE I+ I S ARVL+GH+ V A++P+ + LAS T W++ N
Sbjct: 338 DENIE----IPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQ 393
Query: 183 --LKRVAPDIGSD-PSSMNV--LSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
L+ G++ PS+ +V L W+ DG LA ++ D +L S G H
Sbjct: 394 LVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDG--RLASTLGQHK 451
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWD 265
PI L W+ G Y+ ++ +D+ +IWD
Sbjct: 452 GPIFALKWNKCGNYILSAGVDKTTIIWD 479
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/220 (20%), Positives = 91/220 (41%)
Query: 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN 112
L L H+ + AL + + S +D + ++ G+ + P + +
Sbjct: 443 LASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDW- 501
Query: 113 KSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYW 172
++ A+ D+ I + + KGH V + + P + LAS T+ W
Sbjct: 502 QTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIW 561
Query: 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL 232
+ R H+L+ + +I + + WSP G P + D+ +L+ +
Sbjct: 562 SMNRDRCCHDLQAHSKEIYT-------IKWSPTGPGTNNPNTNLILASASFDSTVRLWDV 614
Query: 233 -RGD-------HVQPICFLSWSPNGKYMATSSLDRQILIW 264
RG H +P+ +++SP+GK++A+ S D+ + IW
Sbjct: 615 ERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIW 654
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 53/241 (21%), Positives = 99/241 (41%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + + + LA+GS D +++K G + + + PI L +NK G+ + +AG
Sbjct: 413 VTSLDWNCDGSLLATGSYDGYARIWK-TDGRLASTLGQHKGPIFALKWNKCGNYILSAGV 471
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N + AS + + L +
Sbjct: 472 DKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAF-ASCSTDQRIHVCRLGVNEPIKTF 530
Query: 184 KRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFL 243
K + +N + W P G+ LA + ++ + L+ H + I +
Sbjct: 531 K-------GHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQA-HSKEIYTI 582
Query: 244 SWSPNGK---------YMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNAL 293
WSP G +A++S D + +WDV + I K + + +A+ P G L
Sbjct: 583 KWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHL 642
Query: 294 A 294
A
Sbjct: 643 A 643
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 169 (64.5 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 71/277 (25%), Positives = 111/277 (40%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
H + S I D +P N +LR H V A +P S LASGS D + +++
Sbjct: 146 HAINNHSKPMEID-GDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNL 204
Query: 91 P--GGEFQTNIT-RFTL-------P----IRVLAFNKSGSMLAAAGDDEGIKLINTIDGS 136
G T + R + P + L +N G++LA G +G I T +G+
Sbjct: 205 NENGSRASTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAT-GSYDGFARIWTENGN 263
Query: 137 IARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK-RVAPDIGSD-P 194
+A L HKGP+ L ++ Y+ S T I W+ +G AP + D
Sbjct: 264 LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ 323
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
++ S S D + + V D K F +G H + + W P+G +A+
Sbjct: 324 NNTTFASCSTD---MCI-----HVCRLGCDRPVKTF--QG-HTNEVNAIKWDPSGMLLAS 372
Query: 255 SSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIG 290
S D + IW + + + Q I + W P G
Sbjct: 373 CSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTG 409
Score = 161 (61.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 51/223 (22%), Positives = 97/223 (43%)
Query: 52 NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF 111
NL L H+ + AL + + S +D + ++ GE + + P + +
Sbjct: 263 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 322
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
++ + A+ D I + + +GH V + +DP+ LAS T+
Sbjct: 323 -QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKI 381
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGET---------LAVPGLKNDVVMYD 222
W ++ +HNL+ +I + + WSP G T LA + V ++D
Sbjct: 382 WSMKQDACVHNLQAHRKEIYT-------IKWSPTGPTTSNPNSSIMLASASFDSTVRLWD 434
Query: 223 RDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
+ +LR H +P+ +++SP+GKY+A+ S D+ + IW+
Sbjct: 435 MEQGVCTHTLR-KHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 476
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/237 (22%), Positives = 108/237 (45%)
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
VT+L + + T LA+GS D +++ G + + + PI L +NK G+ + +AG
Sbjct: 234 VTSLDWNSDGTLLATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGV 292
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ + + G + H P + + N+ + AS + + L R +
Sbjct: 293 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDRPVKTF 351
Query: 184 KRVAPDIGS---DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLRGDHVQP 239
+ ++ + DPS M + S S D TL + +K D +++ K +++++ P
Sbjct: 352 QGHTNEVNAIKWDPSGMLLASCSDD-MTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGP 410
Query: 240 ICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALA 294
+ +PN M A++S D + +WD+ + + +K + + +A+ P G LA
Sbjct: 411 T---TSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLA 464
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/159 (28%), Positives = 72/159 (45%)
Query: 34 TASSSETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
T +S T + IH L + P K + H + V A+ P+ LAS S D ++K++
Sbjct: 327 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 386
Query: 93 GEFQTNITRFTLPIRVLAFNKSGS---------MLAAAGDDEGIKLINTIDGSIARVLKG 143
N+ I + ++ +G MLA+A D ++L + G L+
Sbjct: 387 DACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRK 446
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN 182
H+ PV +AF P+ +YLAS V W QSG +H+
Sbjct: 447 HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHS 485
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 174 (66.3 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 60/261 (22%), Positives = 110/261 (42%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
++ H D V A S + +A+ S+D VK++ G + + F +
Sbjct: 654 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSH 713
Query: 117 --MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+LA A D +KL + + GH V F P+ + LAS + GT+ W++
Sbjct: 714 YLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDV 773
Query: 175 QSGRELH--NLKRVAPDIGSDPSSMNVL----SWSPDGETLAVPGLKNDVVMYDRDTAEK 228
+S E N+K+ + M V+ SWS DG + V KN + ++D T
Sbjct: 774 KSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAA-KNKIFLFDIHTGGL 832
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-IWDVGKKLDI-DRQKFDDRICCMAW 286
L + H I + +SP ++A +L + + +W++ L + D + + C+ +
Sbjct: 833 LAEIHTGHHSTIQYCDFSPQN-HLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMF 891
Query: 287 KPIGNALAVIDVMGKYGVWES 307
P G++ +WE+
Sbjct: 892 SPDGSSFLTSSDDQTIRLWET 912
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 55/230 (23%), Positives = 98/230 (42%)
Query: 52 NLPK-ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
NL + ++R H D V S + +AS +D +++++K GE I + A
Sbjct: 606 NLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCA 665
Query: 111 FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYL--ASIDSIGT 168
F+ +A D+ +K+ N++ G + V H V F NS YL A+ S
Sbjct: 666 FSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCF 725
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE- 227
+ W+L +E N G +S+N +SPD + LA + ++D +A
Sbjct: 726 LKLWDLNQ-KECRNTM-----FGHT-NSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE 778
Query: 228 ------KLFSLRGDHVQP-----ICFLSWSPNGKYMATSSLDRQILIWDV 266
K F L + Q + SWS +G + ++ ++ I ++D+
Sbjct: 779 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK-IFLFDI 827
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 174 (66.3 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 60/261 (22%), Positives = 110/261 (42%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
++ H D V A S + +A+ S+D VK++ G + + F +
Sbjct: 661 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSH 720
Query: 117 --MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174
+LA A D +KL + + GH V F P+ + LAS + GT+ W++
Sbjct: 721 YLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDV 780
Query: 175 QSGRELH--NLKRVAPDIGSDPSSMNVL----SWSPDGETLAVPGLKNDVVMYDRDTAEK 228
+S E N+K+ + M V+ SWS DG + V KN + ++D T
Sbjct: 781 KSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAA-KNKIFLFDIHTGGL 839
Query: 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL-IWDVGKKLDI-DRQKFDDRICCMAW 286
L + H I + +SP ++A +L + + +W++ L + D + + C+ +
Sbjct: 840 LAEIHTGHHSTIQYCDFSPQN-HLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMF 898
Query: 287 KPIGNALAVIDVMGKYGVWES 307
P G++ +WE+
Sbjct: 899 SPDGSSFLTSSDDQTIRLWET 919
Score = 129 (50.5 bits), Expect = 0.00038, P = 0.00038
Identities = 55/230 (23%), Positives = 98/230 (42%)
Query: 52 NLPK-ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
NL + ++R H D V S + +AS +D +++++K GE I + A
Sbjct: 613 NLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCA 672
Query: 111 FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYL--ASIDSIGT 168
F+ +A D+ +K+ N++ G + V H V F NS YL A+ S
Sbjct: 673 FSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCF 732
Query: 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE- 227
+ W+L +E N G +S+N +SPD + LA + ++D +A
Sbjct: 733 LKLWDLNQ-KECRNTM-----FGHT-NSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE 785
Query: 228 ------KLFSLRGDHVQP-----ICFLSWSPNGKYMATSSLDRQILIWDV 266
K F L + Q + SWS +G + ++ ++ I ++D+
Sbjct: 786 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK-IFLFDI 834
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 167 (63.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 164 (62.8 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 59/221 (26%), Positives = 100/221 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L+ H V+ + +S + SG+ D +++L+ G T + +AF+
Sbjct: 59 LKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNR 118
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLK--GHKGPVTGLAFDPNSEYLASIDSIGTVIYWE- 173
+ + D+ IKL NT+ G ++ GH V+ + F PNS I S G W+
Sbjct: 119 QIVSGSRDKTIKLWNTL-GVCKYTIQDEGHTEWVSCVRFSPNSSN-PIIVSCG----WDK 172
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL- 232
+ L N K IG +N ++ SPDG A G +++D + + L++L
Sbjct: 173 MVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 233 RGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDID 273
GD + +CF SPN +Y ++ I IWD+ K+ +D
Sbjct: 232 SGDVINALCF---SPN-RYWLCAATGPSIKIWDLEGKIIVD 268
Score = 137 (53.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 54/223 (24%), Positives = 100/223 (44%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAF-- 111
+ + H +D V ++A S ++ + SGS D ++KL+ G ++ T + + F
Sbjct: 100 RFVGHTKD-VLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSP 158
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171
N S ++ + G D+ +K+ N + + GH G + + P+ AS G +
Sbjct: 159 NSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAML 218
Query: 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV---PGLKN-DV---VMYDRD 224
W+L G+ L+ L D G +N L +SP+ L P +K D+ ++ D +
Sbjct: 219 WDLNEGKHLYTL-----DSGD---VINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD-E 269
Query: 225 TAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILIWDV 266
+++ S P C L+WS +G+ + D I +W V
Sbjct: 270 LRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQV 312
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 164 (62.8 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 57/220 (25%), Positives = 94/220 (42%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNIT--RFTLPIRVLAFN 112
+ ++H V L +SP+ LA+ H+VKLY +T T + +AF+
Sbjct: 26 RTIQHPDSQVNRLCISPDKRFLAAAG-HHTVKLYDIKSTNPNALLTFEGHTGNVTGVAFH 84
Query: 113 KSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYW 172
G + + +D +K+ T G+I R H+ PV + PN + S D GT+ W
Sbjct: 85 CEGKWMVTSSEDGTVKIWETRTGTIQRSYN-HQSPVNDVVIHPNQGEIISCDRAGTIRLW 143
Query: 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY------DRDTA 226
+L + + P+ SS+ V + DG L + +V ++ +R A
Sbjct: 144 DLADNK---CTSEMVPEEDVSVSSLTVAT---DGSLLCAANNRGNVFVWTLSQGLERTIA 197
Query: 227 EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
+ H Q I + SP+ K +AT S D IW+V
Sbjct: 198 TAMTQFSA-HDQYITRVLLSPDVKKLATCSADHTAKIWEV 236
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 172 (65.6 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 51/209 (24%), Positives = 98/209 (46%)
Query: 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP----NSEYLA 161
+ +A++ G +A G+D +K+ NT G H+GPVT + + P N + A
Sbjct: 361 MNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQNVVFSA 420
Query: 162 SIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-DVVM 220
+D GT+ ++L R V+P+ + + L+ P GE +A L + ++ +
Sbjct: 421 GVD--GTIRAFDLVRYRNFRTF--VSPN----KTQFSCLAVDPSGEIIAAGSLDSFEIYV 472
Query: 221 YDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR--QKFD 278
+ T +L + H P+C L++ P ++A++S D+ IW++ + +I Q
Sbjct: 473 WSVRTG-RLTDILSGHQSPVCELAFDPINPFLASASWDKSCKIWNIFEDREIRESIQHTS 531
Query: 279 DRICCMAWKPIGNALAVIDVMGKYGVWES 307
D + C A+ G V + G ++E+
Sbjct: 532 DVLTC-AYSQDGKKFIVSCLDGTIQIYET 559
Score = 132 (51.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 60 HRDGVTALALSPNST--CLASGSIDHSVKLYKFPG-GEFQTNITRFTLPIRVLAFNKSGS 116
H VTA+ SP S+ + S +D +++ + F+T ++ LA + SG
Sbjct: 399 HEGPVTAVKYSPVSSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSGE 458
Query: 117 MLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
++AA D I + + G + +L GH+ PV LAFDP + +LAS + W +
Sbjct: 459 IIAAGSLDSFEIYVWSVRTGRLTDILSGHQSPVCELAFDPINPFLASASWDKSCKIWNIF 518
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225
RE+ + D+ + ++S DG+ V L + +Y+ T
Sbjct: 519 EDREIRESIQHTSDVLT-------CAYSQDGKKFIVSCLDGTIQIYETST 561
Score = 55 (24.4 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILI--WDVGKKL 270
G K D ++ ++A + F+ C ++ N KY+ +D+Q+LI + L
Sbjct: 579 GYK-DEILAKNNSAGRAFTKIAFTPNGECIIAGG-NSKYICIYHIDQQVLIKKYSTSSNL 636
Query: 271 DIDRQKFDDRICCMAWKPIGNALAVIDVMGK 301
+D D + WK +G +D M K
Sbjct: 637 SLDGITLD-----INWKRVGE-FGHLDAMEK 661
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 166 (63.5 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 57/261 (21%), Positives = 115/261 (44%)
Query: 8 LREAHKCGNAASFCS----ILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDG 63
L +A +C AS + + W + + LV ++ + T+ I +P L + + H +
Sbjct: 47 LNQAARCIRFASHSAPVNGVAWSPKGN-LVASAGHDRTVKIWEPKLRGVSGEFVAHSK-A 104
Query: 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGD 123
V ++ + + S D S K+++ +F ++ + +R F+ +G ++A A D
Sbjct: 105 VRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASD 164
Query: 124 DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
D+ +++ + G R + LA+ P LA + +++ SG +L L
Sbjct: 165 DKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDV-SGSQLLQL 223
Query: 184 KRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFL 243
V S P +N +++ P G L + + D +++L G H + +
Sbjct: 224 YVVH----SAP--VNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTG-HTDAVNAV 276
Query: 244 SWSPNGKYMATSSLDRQILIW 264
++S +G AT DRQ+L+W
Sbjct: 277 AFSRDGDKFATGGSDRQLLVW 297
Score = 165 (63.1 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 78/349 (22%), Positives = 142/349 (40%)
Query: 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALAL 69
E H G++ + + + T SS+++T+ + + + + H V +A
Sbjct: 11 ERHFTGHSGGITQLRFGPDGAQIAT-SSTDSTVILWNLNQAARCIRFASHSAP-VNGVAW 68
Query: 70 SPNSTCLASGSIDHSVKLY--KFPG--GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125
SP +AS D +VK++ K G GEF + + +R + F+ +G ++ A DD+
Sbjct: 69 SPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAH----SKAVRSVDFDSTGHLMLTASDDK 124
Query: 126 GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL-- 183
K+ V F PN + +A+ +V +++ SG +
Sbjct: 125 SAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTE 184
Query: 184 KRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFL 243
+R AP L+W P G LAV N + ++D + +L L H P+ +
Sbjct: 185 ERAAP---------RQLAWHPWGNMLAVALGCNRIKIFDV-SGSQLLQLYVVHSAPVNDV 234
Query: 244 SWSPNGKYMATSSLDRQILIWDV--GKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGK 301
++ P+G ++ + S DR I I D+ G+ + D + +A+ G+ A +
Sbjct: 235 AFHPSGHFLLSGSDDRTIRILDLLEGRPI-YTLTGHTDAVNAVAFSRDGDKFATGGSDRQ 293
Query: 302 YGVWES---VVPSSMKSPTEDIPSSRSNYNGLLLFDEEEKEPSTSGSLS 347
VW+S +S + SS +G+ E S S LS
Sbjct: 294 LLVWQSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSKSNDLS 342
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 53/223 (23%), Positives = 96/223 (43%)
Query: 1 MKVRSVKLR--EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR 58
+K+ KLR ++ + S+ +D H ++TAS ++ I +
Sbjct: 84 VKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSA-KIWR-VARRQFVSSFA 141
Query: 59 HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
+ V + SPN +A+ S D SV++Y GE T R LA++ G+ML
Sbjct: 142 QQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNML 201
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A A IK+ + + ++ H PV +AF P+ +L S T+ +L GR
Sbjct: 202 AVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGR 261
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221
++ L ++N +++S DG+ A G ++++
Sbjct: 262 PIYTLT-------GHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 47/221 (21%), Positives = 91/221 (41%)
Query: 54 PKILRH---HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA 110
P + RH H G+T L P+ +A+ S D +V L+ + P+ +A
Sbjct: 8 PALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVA 67
Query: 111 FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170
++ G+++A+AG D +K+ ++ H V + FD + + +
Sbjct: 68 WSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAK 127
Query: 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230
W + ++ + + +SP+G+ +A V +YD D+ E +
Sbjct: 128 IWRVAR-------RQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVR 180
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV-GKKL 270
+ + P L+W P G +A + +I I+DV G +L
Sbjct: 181 TFTEERAAPRQ-LAWHPWGNMLAVALGCNRIKIFDVSGSQL 220
Score = 129 (50.5 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL-QSGRELHNLKRVAPDIGS 192
D ++ R GH G +T L F P+ +A+ + TVI W L Q+ R + AP
Sbjct: 7 DPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAP---- 62
Query: 193 DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD---HVQPICFLSWSPNG 249
+N ++WSP G +A G V +++ KL + G+ H + + + + G
Sbjct: 63 ----VNGVAWSPKGNLVASAGHDRTVKIWE----PKLRGVSGEFVAHSKAVRSVDFDSTG 114
Query: 250 KYMATSSLDRQILIWDVGKK 269
M T+S D+ IW V ++
Sbjct: 115 HLMLTASDDKSAKIWRVARR 134
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 58/269 (21%), Positives = 110/269 (40%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V PN + LAS D + L+ G + + + + L +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 182 IR--------KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + +WDV +R F+ +
Sbjct: 234 G-HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 285 AWKPIGNALAVIDVMGKYGVWESVVPSSM 313
+W P G+ +A W S+ S+
Sbjct: 293 SWSPDGSKIAAGSADSFLYPWHSLSVRSL 321
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 48/202 (23%), Positives = 88/202 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 165
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + I F +VLA FN + + + G D IK+
Sbjct: 166 QLVC--TGSDDGTVKLWDI---RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ ++
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQG 280
Query: 189 DIGSDPSSMNVLSWSPDGETLA 210
++ + ++ SWSPDG +A
Sbjct: 281 NVHNFEKNLLRCSWSPDGSKIA 302
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 166 (63.5 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 57/263 (21%), Positives = 109/263 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V PN + LAS D + L+ G + + + + L +N
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 181 IR--------KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + +WDV +R F+ +
Sbjct: 233 G-HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 291
Query: 285 AWKPIGNALAVIDVMGKYGVWES 307
+W P G+ +A VW++
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDT 314
Score = 151 (58.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 57/246 (23%), Positives = 106/246 (43%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 164
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + I F +VLA FN + + + G D IK+
Sbjct: 165 QLVC--TGSDDGTVKLWDI---RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ ++
Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQG 279
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
++ + ++ SWSPDG +A V ++D + L+ L G H I +++ P+
Sbjct: 280 NVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPD 338
Query: 249 GKYMAT 254
+ T
Sbjct: 339 EPIIET 344
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 166 (63.5 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T + ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 184 (69.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 69/256 (26%), Positives = 110/256 (42%)
Query: 60 HRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V L++ S L +G D+ V L+ ++ T P+ +AFN S +L
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN-SEEVL 72
Query: 119 AAAGDDEG-IKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
AG G IKL + + + R GH+ + + F P E+LAS S + W+ +
Sbjct: 73 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKK 132
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV 237
+ K ++ + +SPDG + GL N V ++D TA KL H
Sbjct: 133 GCIQTYK-------GHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL-TAGKLLHEFKCHE 184
Query: 238 QPICFLSWSPNGKYMATSSLDRQILIWDVG--KKLDIDRQKFDDRICCMAWKPIGNAL-- 293
PI L + P +AT S DR + WD+ + + R + + +A+ P G L
Sbjct: 185 GPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATG-VRAIAFHPDGQTLFC 243
Query: 294 AVIDVMGKYGVWESVV 309
+ D + Y WE V+
Sbjct: 244 GLDDGLKVYS-WEPVI 258
Score = 174 (66.3 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 68/258 (26%), Positives = 116/258 (44%)
Query: 14 CGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNS 73
CG+ + S+ ++ + LV A +S I + D L S + + HR +A+ P
Sbjct: 55 CGHTSPVDSVAFNSE-EVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHPFG 112
Query: 74 TCLASGSIDHSVKLYKF-PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
LASGS D +++++ G QT T I + F+ G + + G D +K+ +
Sbjct: 113 EFLASGSSDTNLRVWDTRKKGCIQT-YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS 192
G + K H+GP+ L F P LA+ + TV +W+L++ EL R P+
Sbjct: 172 TAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETF-ELIGTTR--PEA-- 226
Query: 193 DPSSMNVLSWSPDGETLAVPGLKNDVVMYD------RDTAEKLFSLRGDHVQPICFLSWS 246
+ + +++ PDG+TL GL + + +Y RD + +S GD C
Sbjct: 227 --TGVRAIAFHPDGQTLFC-GLDDGLKVYSWEPVICRDGVDMGWSTLGD----FCI---- 275
Query: 247 PNGKYMATSSLDRQILIW 264
GK++ S + IW
Sbjct: 276 NEGKFIGCSYYRNSVGIW 293
Score = 39 (18.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 578 NIAKGTEPLKGRLPLTPGSQLT 599
N+A+ LK LPL G T
Sbjct: 358 NVAQNPGSLKATLPLESGKVAT 379
Score = 39 (18.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 333 FDEEEKEPSTSGSLSDLGEDSHGESEMPSRKRLRK 367
F+ EK T G+ + + ++++ E P RK R+
Sbjct: 607 FERGEKTTHTEGASTTIEQNNNAVQEDP-RKTSRQ 640
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 166 (63.5 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGIKLINTID 134
LA+G + +K++ G+ N+ T +R L F GS+ L +A D+ +++ + D
Sbjct: 143 LATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKD 202
Query: 135 -GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G++ +VL+GH+ V AF P+S L S+ + V W++ + L+ D+ +
Sbjct: 203 DGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHHHDVVA- 261
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR------------GDHVQPIC 241
+SPDG LA V ++D T + L G + + +
Sbjct: 262 ------CDFSPDGALLATASYDTRVYIWDPHTGDILMEFGHLFPPPTPIFAGGANDRWVR 315
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGK 301
+S+S +G ++A+ + D+ + W + + + + +CC A+ G+ LA G
Sbjct: 316 SVSFSHDGLHVASLADDKMVRFWRIDEDYPVQVAPLSNGLCC-AFSTDGSVLAAGTHDGS 374
Query: 302 YGVWESV--VPS 311
W + VPS
Sbjct: 375 VYFWATPRQVPS 386
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 42/151 (27%), Positives = 68/151 (45%)
Query: 117 MLAAAGDDEG-IKLINTIDGSIARVLKGHKGPVTGLAFDPN-SEYLASIDSIGTVIYWEL 174
+L A G + G IK+ + G + L H V L F P+ S L S T+ W+L
Sbjct: 141 LLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDL 200
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234
+ N+ +V + + + ++SPD L G V ++D D + L G
Sbjct: 201 KDDG---NMMKV---LRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEG 254
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
H + +SP+G +AT+S D ++ IWD
Sbjct: 255 HH-HDVVACDFSPDGALLATASYDTRVYIWD 284
>POMBASE|SPAC144.13c [details] [associations]
symbol:srw1 "CDK inhibitor Srw1" species:4896
"Schizosaccharomyces pombe" [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007092 "activation of
mitotic anaphase-promoting complex activity" evidence=TAS]
[GO:0008054 "cyclin catabolic process" evidence=IMP] [GO:0030996
"cell cycle arrest in response to nitrogen starvation"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC144.13c GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000750 GO:GO:0008054
GO:GO:0007092 GO:GO:0045736 GO:GO:0031137 HOGENOM:HOG000195514
KO:K03364 OrthoDB:EOG43FM5B GO:GO:0030996 EMBL:AB005589
EMBL:AB001285 PIR:T37680 RefSeq:NP_594674.1
ProteinModelPortal:O13286 STRING:O13286 EnsemblFungi:SPAC144.13c.1
GeneID:2542824 KEGG:spo:SPAC144.13c OMA:PMATANL NextBio:20803866
Uniprot:O13286
Length = 556
Score = 168 (64.2 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 61/250 (24%), Positives = 114/250 (45%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI 81
S+ W Q+ HL + + + + I D + + H + V AL S N L+SG
Sbjct: 296 SLRWVQRGTHLAVGTHNGS-VEIWDAATCKKT-RTMSGHTERVGAL--SWNDHVLSSGGR 351
Query: 82 DHSV--KLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIAR 139
D+ + + + P F+ +T + L +N + ++LA+ G+D + + + +
Sbjct: 352 DNHILHRDVRAPEHYFRV-LTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLY 410
Query: 140 VLKGHKGPVTGLAFDPNSE-YLASIDSIG--TVIYWELQSGRELHNLKRVAPDIGSDPSS 196
H V + + P+ LAS T+ W Q G LHN+ D GS
Sbjct: 411 SFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLWNTQRGSMLHNI-----DTGSQVC- 464
Query: 197 MNVLSWSPD-GETLAVPG-LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
N+L WS E ++ G ++N+V +++ + ++ +L+G H + +L+ SPNG+ + T
Sbjct: 465 -NLL-WSKQTNEFISTHGFMENEVALWNYPSVSRVGTLKG-HTDRVLYLAMSPNGENIVT 521
Query: 255 SSLDRQILIW 264
+ D + W
Sbjct: 522 GAADETLRFW 531
>UNIPROTKB|Q5ZKU8 [details] [associations]
symbol:PAK1IP1 "p21-activated protein kinase-interacting
protein 1-like" species:9031 "Gallus gallus" [GO:0009968 "negative
regulation of signal transduction" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009968 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
EMBL:AJ719986 IPI:IPI00597011 RefSeq:NP_001026170.1
UniGene:Gga.22356 ProteinModelPortal:Q5ZKU8 STRING:Q5ZKU8
GeneID:420850 KEGG:gga:420850 InParanoid:Q5ZKU8 NextBio:20823706
Uniprot:Q5ZKU8
Length = 369
Score = 157 (60.3 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 50/170 (29%), Positives = 80/170 (47%)
Query: 59 HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
HH + A++ NS + +GS D S+++Y + + I L F + +L
Sbjct: 31 HHAHTASLSAVAVNSKYVVTGSRDESIQIYDMRKKVEHGALLQHNGTITCLEFYGTAHLL 90
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
+ A +D I + NT + +K HKG VT L+ P+ + S+ + T+ W L GR
Sbjct: 91 SGA-EDGLICIWNTKRWECLKSIKAHKGHVTSLSIHPSGKLALSVGTDKTLRTWNLVEGR 149
Query: 179 E--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA 226
+ NLK+ A +++ WSPDGE V + N V +Y DTA
Sbjct: 150 SAFIKNLKQNA----------HIIKWSPDGEKY-VTVITNKVDIYKLDTA 188
Score = 53 (23.7 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 41/162 (25%), Positives = 63/162 (38%)
Query: 732 LEAAQDRCILRLIASC----CNGDKLVRATELVKLLSLDKSMQGAIKLVTK---LKLPNL 784
L A D I+R SC C + R + + S ++ Q I + +K+ NL
Sbjct: 211 LAIAGDDEIIRFY-SCDSQKCLCEFKARENRIKDIYSFEREGQHVIVTASSDGYIKVWNL 269
Query: 785 -AERFNSILEERLLSETKETPNTTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPSV 843
+ N++ LL E T L + + + KA+TSTE +E +P
Sbjct: 270 DLNKINNV--PSLLCEVSTKARLTCLAVWLDQASEMKENCGKAATSTEANESEKPSAVKK 327
Query: 844 KFSLPIFK--KKVKSPEEI---KLGNEPTIQNQKAKVDNNRE 880
K + K K K I K E +Q +K K N+ E
Sbjct: 328 KKVCGMNKSGKLTKQRRRIVPAKRKLEAPLQKKKKKKQNSSE 369
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 165 (63.1 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y + S
Sbjct: 276 EHVVECISWAPESSYSSIS 294
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 60/253 (23%), Positives = 112/253 (44%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ + LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDYKNK 370
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 170 (64.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/229 (25%), Positives = 105/229 (45%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNS 73
G+ S ++ + ++VT + + + + L S + L H GVT + +
Sbjct: 371 GHFNSMVALAYSPDGQYIVTGGD-DGKVKVWNTL--SGFCFVTLTEHSSGVTGVTFTTTG 427
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFTLP----IRVLAFNKSGSMLAAAGDDE-GIK 128
+ + S+D +V+ + ++ N FT P +A + SG +++A D I
Sbjct: 428 HVIVTSSLDGTVRAFDLH--RYR-NFRTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEIF 484
Query: 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL-QSGRELHNLKRVA 187
+ + G + VL GH+GPV+GL F+P LAS TV W++ S R L
Sbjct: 485 VWSMQTGRLLDVLSGHEGPVSGLCFNPMKSILASASWDKTVRLWDMFDSWRTKETLT--- 541
Query: 188 PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
+ SD ++ ++ PDG LAV L + + +D + A ++ S+ G H
Sbjct: 542 --LTSDALAV---TFRPDGAELAVATLNSQITFWDPENAVQVGSIEGRH 585
Score = 156 (60.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 69/314 (21%), Positives = 133/314 (42%)
Query: 2 KVRSVKLRE--AHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILR 58
KV+ +L + +K G+ + S + ++ H LVT +S +H+ LP NL L
Sbjct: 271 KVKYSRLAKYFLNKEGDFNNLTSAAYHKKTHLLVTGFASGI-FHLHE--LPEFNLIHSLS 327
Query: 59 HHRDGVTALALSPNSTCLASG-SIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM 117
V ++A++ + +A G S + ++++ + + LA++ G
Sbjct: 328 ISDQRVASVAINSSGDWIAFGCSGMGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQY 387
Query: 118 LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177
+ GDD +K+ NT+ G L H VTG+ F + + GTV ++L
Sbjct: 388 IVTGGDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRY 447
Query: 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-DVVMYDRDTAEKLFSLRGDH 236
R +P P+ + ++ GE ++ + ++ ++ T L L G H
Sbjct: 448 RNFRTF--TSPR----PTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSG-H 500
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK----FDDRICCMAWKPIGNA 292
P+ L ++P +A++S D+ + +WD+ D R K + ++P G
Sbjct: 501 EGPVSGLCFNPMKSILASASWDKTVRLWDM---FDSWRTKETLTLTSDALAVTFRPDGAE 557
Query: 293 LAVIDVMGKYGVWE 306
LAV + + W+
Sbjct: 558 LAVATLNSQITFWD 571
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 46/153 (30%), Positives = 75/153 (49%)
Query: 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200
L+GH V +AF P +YLAS TV +W+L + + G +++
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQ------GHRHWVLSI- 113
Query: 201 SWSPDGETLAVPGLKN-DVVMYDRDTAEKLFSLRGDHVQPICFLSW-----SPNGKYMAT 254
SWSPDG+TLA G KN ++++D T +++ + H + I LSW +P +YMA+
Sbjct: 114 SWSPDGKTLA-SGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMAS 172
Query: 255 SSLDRQILIWDV-GKKLDIDRQKFDDRICCMAW 286
SS D + +WD + + + C+ W
Sbjct: 173 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 61/264 (23%), Positives = 109/264 (41%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
+ +SS + ++ + D +IL H VT L + L S S D ++K+++
Sbjct: 170 MASSSKDGSVRVWDTTA-GRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHD 227
Query: 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKL-INTIDGSIARVLKGHKGPVTGL 151
G + + +A + ++ A + + + GS+ LK L
Sbjct: 228 GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQE-LKDRALRRYNL 286
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211
E L S T+ W S E + K +A G + +N + +SPD +A
Sbjct: 287 VRGQGPERLVSGSDDFTLFMW---SPAE--DKKPLARMTGHQ-ALINQVLFSPDSRIIAS 340
Query: 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDV-GKKL 270
+ ++D T + L SLRG HV + ++WS + + + + S D + +WDV +KL
Sbjct: 341 ASFDKSIKLWDGRTGKYLASLRG-HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 399
Query: 271 DIDRQKFDDRICCMAWKPIGNALA 294
D D + + W P G +A
Sbjct: 400 AADLPGHADEVYAVDWSPDGQRVA 423
Score = 139 (54.0 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 62/258 (24%), Positives = 110/258 (42%)
Query: 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSP---NSTC--L 76
SI W L + + I + DP + ++L H +T L+ P N C +
Sbjct: 112 SISWSPDGKTLASGCKNGQ-ILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYM 170
Query: 77 ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS 136
AS S D SV+++ G + +T T + L + G +L +A D IK+ DG
Sbjct: 171 ASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGV 229
Query: 137 IARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSS 196
+ R L+GH V +A +++Y ++ T + ++ +L+ ++ D +
Sbjct: 230 LCRTLQGHGHWVNTMAL--STDY-----ALRTGAFEPAEASINAQDLQGSLQEL-KDRAL 281
Query: 197 MNVLSWSPDGETLAVPGLKNDVVMYDRDTAE--KLFSLRGDHVQPICFLSWSPNGKYMAT 254
G V G +D ++ AE K + H I + +SP+ + +A+
Sbjct: 282 RRYNLVRGQGPERLVSG-SDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIAS 340
Query: 255 SSLDRQILIWD--VGKKL 270
+S D+ I +WD GK L
Sbjct: 341 ASFDKSIKLWDGRTGKYL 358
Score = 132 (51.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 47/161 (29%), Positives = 75/161 (46%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-----IRVLAF 111
L H + V ++A SP LASGS D +V+ + + T FT + +++
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFW-----DLSTETPHFTCQGHRHWVLSISW 115
Query: 112 NKSGSMLAAAGDDEGIKLINTIDGS-IARVLKGHKGPVTGLAFDP---NSE--YLASIDS 165
+ G LA+ + I L + G + RVL GH +TGL+++P N E Y+AS
Sbjct: 116 SPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
Query: 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG 206
G+V W+ +GR +R+ + S+ L W DG
Sbjct: 176 DGSVRVWDTTAGR----CERI---LTGHTQSVTCLRWGGDG 209
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 57/261 (21%), Positives = 117/261 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISI---HDPLLPSNLPKILRHHRDGVTALALSP 71
G+ S + W L+ ++S + TI + HD +L + L+ H V +ALS
Sbjct: 195 GHTQSVTCLRWGGDG--LLYSASQDRTIKVWRAHDGVLC----RTLQGHGHWVNTMALST 248
Query: 72 NSTCLASGSIDH---SVKLYKFPGG--EFQTN-ITRFTLPIRVLAFNKSGSMLAAAGDDE 125
+ L +G+ + S+ G E + + R+ L +R + L + DD
Sbjct: 249 DYA-LRTGAFEPAEASINAQDLQGSLQELKDRALRRYNL-VR----GQGPERLVSGSDDF 302
Query: 126 GIKLINTIDGS--IARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNL 183
+ + + + +AR + GH+ + + F P+S +AS ++ W+ ++G+ L +L
Sbjct: 303 TLFMWSPAEDKKPLAR-MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASL 361
Query: 184 KRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFL 243
+ +++ ++WS D L + + ++D A+KL + H + +
Sbjct: 362 R-------GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK-AQKLAADLPGHADEVYAV 413
Query: 244 SWSPNGKYMATSSLDRQILIW 264
WSP+G+ +A+ D+ + IW
Sbjct: 414 DWSPDGQRVASGGKDKCLRIW 434
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 169 (64.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 85/331 (25%), Positives = 135/331 (40%)
Query: 22 SILWDQQAHHLVTA-SSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80
S+ W + L+T + E T+ N IL+ H + AL + N L S
Sbjct: 138 SVCWSPEGKRLITGCQTGEFTLWNGTAF---NFETILQAHDSAIRALKWASNEQWLLSAD 194
Query: 81 IDHSVKLYKFPGGEFQTNITRFTL----PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS 136
VK ++ P N F+ IR LAF + A A DD ++ + +
Sbjct: 195 QGGYVKYWQ-PN---MNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYT 250
Query: 137 IARVLKGHKGPVTGLAFDPNSEYLA--SIDSIGTVIYWELQSGRELHNLKRVAPDIGSDP 194
RVL+GH V + + P +A S D+ V W+ +SG L L+
Sbjct: 251 EERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQE-------HK 303
Query: 195 SSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP--NGKYM 252
SS+ + ++ +G L G + V MYD +++ + R H + + L+W P G ++
Sbjct: 304 SSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRA-HKKEVISLAWHPIHEGLFV 362
Query: 253 ATSSLDRQILIW--DVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310
+ D I+ W D K++ + D I M W P+G+ LA W P
Sbjct: 363 SGGG-DGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRP 421
Query: 311 SSMKSPTEDIPS-SRSNYNGLLLFDEEEKEP 340
EDI S +N G L ++E+EP
Sbjct: 422 GDT---VEDIFGLSNTNMIGHL---DKEREP 446
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 180 (68.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 62/251 (24%), Positives = 109/251 (43%)
Query: 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
H V++L L +S LA+G D V ++ ++T T + + FN S +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
A ++L + I R L GHK ++ L F P EYLAS + W+++
Sbjct: 79 VAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
Query: 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238
+ K ++ L++SPDG+ LA + V ++D A K+ + H
Sbjct: 139 CVFRYK-------GHTQAVRCLAFSPDGKWLASASDDSTVKLWDL-IAGKMITEFTSHTS 190
Query: 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRIC-CMAWKPIGNAL--AV 295
+ + + PN +A+ S DR + +WD+ K I + + + + + P G+ L
Sbjct: 191 AVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS 250
Query: 296 IDVMGKYGVWE 306
+ + YG WE
Sbjct: 251 ENTLRVYG-WE 260
Score = 171 (65.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 56/189 (29%), Positives = 87/189 (46%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92
V A S ++ + D L + + + L H+ +++L P LASGS+D ++KL+
Sbjct: 78 VVAGSLSGSLRLWD-LEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136
Query: 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152
T +R LAF+ G LA+A DD +KL + I G + H V +
Sbjct: 137 KGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQ 196
Query: 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212
F PN LAS + TV W+L E N+ + G +VL ++PDG L
Sbjct: 197 FHPNEYLLASGSADRTVKLWDL----EKFNM--IGSSEGETGVVRSVL-FNPDGSCL-YS 248
Query: 213 GLKNDVVMY 221
G +N + +Y
Sbjct: 249 GSENTLRVY 257
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 796 LLSETKETPNTTLLISNNN 814
+++ TK P+T +++S N
Sbjct: 480 VVNTTKPKPSTGIILSTRN 498
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 62/223 (27%), Positives = 104/223 (46%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
K L H + +++S + SGS DHSV+L+ GE + T + ++F+
Sbjct: 66 KSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD 125
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ +A D+ IKL NT+ + + H +T + F P+ A I S G W+
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQ-AIIVSCG----WD 180
Query: 174 LQSGRELHNLKR--VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVV-MYDRDTAEKLF 230
++ NLK + ++ +N ++ SPDG +L G K+ V ++D + L+
Sbjct: 181 KLV--KVWNLKNCDLNKNLEGHTGVLNTVTISPDG-SLCASGGKDGVAKLWDVKEGKHLY 237
Query: 231 SLR-GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI 272
SL G + +CF SP Y ++ DR I IW++ KL I
Sbjct: 238 SLETGSTINSLCF---SPCD-YWLCAATDRFIRIWNLESKLII 276
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 54/243 (22%), Positives = 117/243 (48%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94
+ S + ++ + D L + + H D V +++ SP++ + S S D ++KL+ +
Sbjct: 89 SGSWDHSVRLWDLSLGETIRSFIGHTSD-VFSVSFSPDNRQIVSASRDKTIKLWNTLA-Q 146
Query: 95 FQTNIT--RFTLPIRVLAFNKSGS--MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+ IT + T I + F+ S + ++ + G D+ +K+ N + + + L+GH G +
Sbjct: 147 CKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNT 206
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ P+ AS G W+++ G+ L++L + GS ++N L +SP L
Sbjct: 207 VTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL-----ETGS---TINSLCFSPCDYWLC 258
Query: 211 VPGLKNDVVMYDRDTA---EKLFSLRGDHVQ-PICF-LSWSPNGKYMATSSLDRQILIWD 265
+ +++ ++ +++ ++ + P C L+WS NG+ + S D I +++
Sbjct: 259 A-ATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYE 317
Query: 266 VGK 268
V K
Sbjct: 318 VKK 320
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 49/203 (24%), Positives = 93/203 (45%)
Query: 136 SIARVLKG-HKGPVTGLAF--DPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS 192
S+ VL+G H VT ++ DP + + S +I W + + + + +
Sbjct: 11 SLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTG 70
Query: 193 DPSSMNVLSWSPDGETLAVPGL-KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
++N +S S DG A+ G + V ++D E + S G H + +S+SP+ +
Sbjct: 71 HSQAINDVSISSDG-LFALSGSWDHSVRLWDLSLGETIRSFIG-HTSDVFSVSFSPDNRQ 128
Query: 252 MATSSLDRQILIWDVGK--KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309
+ ++S D+ I +W+ K I Q+ D I C+ + P N A+I G W+ +V
Sbjct: 129 IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQ-AIIVSCG----WDKLV 183
Query: 310 PS-SMKSPTEDIPSSRSNYNGLL 331
++K+ D+ + + G+L
Sbjct: 184 KVWNLKNC--DLNKNLEGHTGVL 204
Score = 118 (46.6 bits), Expect = 0.00086, P = 0.00086
Identities = 46/211 (21%), Positives = 86/211 (40%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSP--N 72
G+ + S+ + +V+AS +T I + + L + H D +T + SP N
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKT-IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPN 170
Query: 73 STCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + N+ T + + + GS+ A+ G D KL +
Sbjct: 171 QAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDV 230
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYL-ASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+G L+ + L F P +L A+ D + W L+S + + V
Sbjct: 231 KEGKHLYSLETGS-TINSLCFSPCDYWLCAATDRF--IRIWNLESKLIISEIYPVKQSKI 287
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
P + L+WS +G+ L ++ +Y+
Sbjct: 288 GVPWCTS-LTWSANGQLLYCGSTDGNIYVYE 317
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 62/223 (27%), Positives = 104/223 (46%)
Query: 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS 114
K L H + +++S + SGS DHSV+L+ GE + T + ++F+
Sbjct: 66 KSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD 125
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173
+ +A D+ IKL NT+ + + H +T + F P+ A I S G W+
Sbjct: 126 NRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQ-AIIVSCG----WD 180
Query: 174 LQSGRELHNLKR--VAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVV-MYDRDTAEKLF 230
++ NLK + ++ +N ++ SPDG +L G K+ V ++D + L+
Sbjct: 181 KLV--KVWNLKNCDLNKNLEGHTGVLNTVTISPDG-SLCASGGKDGVAKLWDVKEGKHLY 237
Query: 231 SLR-GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI 272
SL G + +CF SP Y ++ DR I IW++ KL I
Sbjct: 238 SLETGSTINSLCF---SPCD-YWLCAATDRFIRIWNLESKLII 276
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 54/243 (22%), Positives = 117/243 (48%)
Query: 35 ASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94
+ S + ++ + D L + + H D V +++ SP++ + S S D ++KL+ +
Sbjct: 89 SGSWDHSVRLWDLSLGETIRSFIGHTSD-VFSVSFSPDNRQIVSASRDKTIKLWNTLA-Q 146
Query: 95 FQTNIT--RFTLPIRVLAFNKSGS--MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+ IT + T I + F+ S + ++ + G D+ +K+ N + + + L+GH G +
Sbjct: 147 CKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNT 206
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
+ P+ AS G W+++ G+ L++L + GS ++N L +SP L
Sbjct: 207 VTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL-----ETGS---TINSLCFSPCDYWLC 258
Query: 211 VPGLKNDVVMYDRDTA---EKLFSLRGDHVQ-PICF-LSWSPNGKYMATSSLDRQILIWD 265
+ +++ ++ +++ ++ + P C L+WS NG+ + S D I +++
Sbjct: 259 A-ATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYE 317
Query: 266 VGK 268
V K
Sbjct: 318 VKK 320
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 49/203 (24%), Positives = 93/203 (45%)
Query: 136 SIARVLKG-HKGPVTGLAF--DPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGS 192
S+ VL+G H VT ++ DP + + S +I W + + + + +
Sbjct: 11 SLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTG 70
Query: 193 DPSSMNVLSWSPDGETLAVPGL-KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251
++N +S S DG A+ G + V ++D E + S G H + +S+SP+ +
Sbjct: 71 HSQAINDVSISSDG-LFALSGSWDHSVRLWDLSLGETIRSFIG-HTSDVFSVSFSPDNRQ 128
Query: 252 MATSSLDRQILIWDVGK--KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309
+ ++S D+ I +W+ K I Q+ D I C+ + P N A+I G W+ +V
Sbjct: 129 IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQ-AIIVSCG----WDKLV 183
Query: 310 PS-SMKSPTEDIPSSRSNYNGLL 331
++K+ D+ + + G+L
Sbjct: 184 KVWNLKNC--DLNKNLEGHTGVL 204
Score = 118 (46.6 bits), Expect = 0.00086, P = 0.00086
Identities = 46/211 (21%), Positives = 86/211 (40%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSP--N 72
G+ + S+ + +V+AS +T I + + L + H D +T + SP N
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKT-IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPN 170
Query: 73 STCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132
+ S D VK++ + N+ T + + + GS+ A+ G D KL +
Sbjct: 171 QAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDV 230
Query: 133 IDGSIARVLKGHKGPVTGLAFDPNSEYL-ASIDSIGTVIYWELQSGRELHNLKRVAPDIG 191
+G L+ + L F P +L A+ D + W L+S + + V
Sbjct: 231 KEGKHLYSLETGS-TINSLCFSPCDYWLCAATDRF--IRIWNLESKLIISEIYPVKQSKI 287
Query: 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222
P + L+WS +G+ L ++ +Y+
Sbjct: 288 GVPWCTS-LTWSANGQLLYCGSTDGNIYVYE 317
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/215 (25%), Positives = 90/215 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSG 115
++ H+D VT+LAL P S S D L+ + + LA + G
Sbjct: 330 VITKHKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHPDG 389
Query: 116 SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
M A D I + + L GH + L+F N YLAS TV W+L+
Sbjct: 390 MMFGIAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWDLR 449
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE-----KLF 230
+ + + P N +S+ G+ L++ ++ND+ +Y+ +T K
Sbjct: 450 KAQSFQTIT-----LNETP---NFISFDYSGKYLSI-AVENDIQIYNFETKNQANLIKTL 500
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
S D V CF S + Y+ +SS+D+ I +W+
Sbjct: 501 SSHTDIVTQTCFGSTT---SYILSSSMDKTIKLWN 532
Score = 150 (57.9 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 138 ARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSM 197
A V+ HK VT LA P Y S I +L++ + + K +PSS
Sbjct: 328 AHVITKHKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSK-------DNPSSF 380
Query: 198 NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSL 257
L+ PDG + +++ +YD + E +L G H + + LS+S NG Y+A+SS
Sbjct: 381 KHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNG-HTKSLNCLSFSENGYYLASSSK 439
Query: 258 DRQILIWDVGK 268
D + +WD+ K
Sbjct: 440 DNTVKLWDLRK 450
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/215 (25%), Positives = 90/215 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSG 115
++ H+D VT+LAL P S S D L+ + + LA + G
Sbjct: 330 VITKHKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHPDG 389
Query: 116 SMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
M A D I + + L GH + L+F N YLAS TV W+L+
Sbjct: 390 MMFGIAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWDLR 449
Query: 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE-----KLF 230
+ + + P N +S+ G+ L++ ++ND+ +Y+ +T K
Sbjct: 450 KAQSFQTIT-----LNETP---NFISFDYSGKYLSI-AVENDIQIYNFETKNQANLIKTL 500
Query: 231 SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
S D V CF S + Y+ +SS+D+ I +W+
Sbjct: 501 SSHTDIVTQTCFGSTT---SYILSSSMDKTIKLWN 532
Score = 150 (57.9 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 138 ARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSM 197
A V+ HK VT LA P Y S I +L++ + + K +PSS
Sbjct: 328 AHVITKHKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSK-------DNPSSF 380
Query: 198 NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSL 257
L+ PDG + +++ +YD + E +L G H + + LS+S NG Y+A+SS
Sbjct: 381 KHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNG-HTKSLNCLSFSENGYYLASSSK 439
Query: 258 DRQILIWDVGK 268
D + +WD+ K
Sbjct: 440 DNTVKLWDLRK 450
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/199 (24%), Positives = 91/199 (45%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L HR VT + P + + S S D ++K++ + G+F+ + T ++ ++F+ +G
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+LA+ D IKL + R + GH V+ +A PN +++ S T+ WE+Q+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G + +K + ++ + DG +A V ++ T E LR +H
Sbjct: 224 G---YCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 275
Query: 237 VQPICFLSWSPNGKYMATS 255
+ +SW+P Y S
Sbjct: 276 EHVVECISWAPESSYSTIS 294
Score = 142 (55.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 60/253 (23%), Positives = 111/253 (43%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
++ ++S + TI + D + + L+ H D V ++ LAS S D ++KL+ F
Sbjct: 122 VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ 180
Query: 92 GGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGL 151
G E + + +A +G + +A D+ IK+ G + GH+ V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 152 AFDPNSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDP-SSMNVLSWSPDGE 207
+ + +AS + TV W + + EL + V I P SS + +S + E
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSE 300
Query: 208 T--------LAVPGLKNDVV-MYDRDTAEKLFSLRG-DH-VQPICFLSWSPNGKYMATSS 256
T + G ++ + M+D T L +L G D+ V+ + F S GK++ + +
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHS---GGKFILSCA 357
Query: 257 LDRQILIWDVGKK 269
D+ + +WD K
Sbjct: 358 DDKTLRVWDFKNK 370
>UNIPROTKB|F1NWB8 [details] [associations]
symbol:PAK1IP1 "p21-activated protein kinase-interacting
protein 1-like" species:9031 "Gallus gallus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00390000001263 IPI:IPI00597011
OMA:NDGFIKM EMBL:AADN02027551 Ensembl:ENSGALT00000020771
Uniprot:F1NWB8
Length = 367
Score = 157 (60.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 50/170 (29%), Positives = 80/170 (47%)
Query: 59 HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118
HH + A++ NS + +GS D S+++Y + + I L F + +L
Sbjct: 29 HHAHTASLSAVAVNSKYVVTGSRDESIQIYDMRKKVEHGALLQHNGTITCLEFYGTAHLL 88
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
+ A +D I + NT + +K HKG VT L+ P+ + S+ + T+ W L GR
Sbjct: 89 SGA-EDGLICIWNTKRWECLKSIKAHKGHVTSLSIHPSGKLALSVGTDKTLRTWNLVEGR 147
Query: 179 E--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA 226
+ NLK+ A +++ WSPDGE V + N V +Y DTA
Sbjct: 148 SAFIKNLKQNA----------HIIKWSPDGEKY-VTVITNKVDIYKLDTA 186
Score = 50 (22.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 41/163 (25%), Positives = 66/163 (40%)
Query: 732 LEAAQDRCILRLIASCCNGDKLV---RATE--LVKLLSLDKSMQGAIKLVTK---LKLPN 783
L A D I+R + C+ K + +A E + + S ++ Q I + +K+ N
Sbjct: 209 LAIAGDDEIIRFYS--CDSQKCLCEFKAHENRIKDIYSFEREGQHVIVTASSDGYIKVWN 266
Query: 784 L-AERFNSILEERLLSETKETPNTTLLISNNNVTARGDVDVSKASTSTERSEMVEPIVPS 842
L + N++ LL E T L + + + KA+TSTE +E +P
Sbjct: 267 LDLNKINNV--PSLLCEVSTKARLTCLAVWLDQASEMKENCGKAATSTEANESEKPSAVK 324
Query: 843 VKFSLPIFK--KKVKSPEEI---KLGNEPTIQNQKAKVDNNRE 880
K + K K K I K E +Q +K K N+ E
Sbjct: 325 KKKVCGMNKSGKLTKQRRRIVPAKRKLEAPLQKKKKKKQNSSE 367
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 169 (64.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 58/206 (28%), Positives = 95/206 (46%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLA 119
H VT +++SPN +A+ S D ++K++ + + I + + LA
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLA 112
Query: 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179
+A DD+ I++ + R LKGH V+ + F+P L S TV W LQ G
Sbjct: 113 SASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTC 172
Query: 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP 239
L R+ P S+P ++V S S DG A ++D + + L +L P
Sbjct: 173 L----RMLP-AHSEPI-ISV-SISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVP 225
Query: 240 ICFLSWSPNGKYMATSSLDRQILIWD 265
+ L ++ N KY+ S+L+ QI +WD
Sbjct: 226 LSNLQFTENRKYLLVSNLNSQIRLWD 251
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 301 KYGV-WESVVPSSMKSPTEDIPSSRSNY 327
+Y + W+ ++ TE +P++ S+Y
Sbjct: 268 RYSMSWDCYSSKNIPKNTEALPNNDSSY 295
>UNIPROTKB|G4N7I7 [details] [associations]
symbol:MGG_06406 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CM001234
KO:K14962 RefSeq:XP_003717163.1 ProteinModelPortal:G4N7I7
EnsemblFungi:MGG_06406T0 GeneID:2684561 KEGG:mgr:MGG_06406
Uniprot:G4N7I7
Length = 373
Score = 159 (61.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 46/174 (26%), Positives = 76/174 (43%)
Query: 55 KILRHHRDGVTALALS---PNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAF 111
K LR + L+L P C+ S S D +++LY G N+ +++ F
Sbjct: 45 KDLRPDKPSPHVLSLDFNDPGDLCMTSES-DETIQLYNVREGRHDKNLASKKYGVKLAKF 103
Query: 112 NKSGSML--AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169
SG+ + A+ ++ I+ + T D S R +GHK VT L P + S TV
Sbjct: 104 THSGTSIIYASTKQNDAIRYLETFDNSFIRYFEGHKDAVTNLEMHPGGDNFLSASRDNTV 163
Query: 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-DVVMYD 222
W+++S + L P + L+W P GE AV ++ +++YD
Sbjct: 164 RLWDIRSKNAVGQLFLNTPYL---------LAWDPSGEVFAVGSPRSGSILLYD 208
Score = 47 (21.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 241 CFLSWSPNGKYMATSSLDRQILIWDVG------KKLDIDRQKFDDR-ICCMAWKPIGNAL 293
CF +P+G+++ ++ + + +WDV K++D D R +A+ P N
Sbjct: 301 CF---TPDGRFVMGANRGQNVSVWDVNGAVGENKRMDPAFTLEDKREAAVLAFNPRFNFF 357
Query: 294 AVID 297
A D
Sbjct: 358 ATAD 361
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 167 (63.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 58/229 (25%), Positives = 103/229 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKI-LRHHRDGVTALALSPNS 73
G+ S S+ + ++VT + + + + L S + H GVT + +
Sbjct: 369 GHFNSMVSLAYSPDGQYIVTGGD-DGKVKVWNSL--SGFCFVTFTEHSSGVTGVTFTTTG 425
Query: 74 TCLASGSIDHSVKLYKFPGGEFQTNITRFTLP----IRVLAFNKSGSMLAAAGDDEGIKL 129
+ + S+D +V+ + ++ N FT P +A + SG +++A D
Sbjct: 426 YVIVTSSMDGTVRAFDLH--RYR-NFRTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEVF 482
Query: 130 INTID-GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL-QSGRELHNLKRVA 187
I ++ G + VL GH+GP++GL F+P LAS TV W++ S R L
Sbjct: 483 IWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDRTVHLWDMADSWRTTETLA--- 539
Query: 188 PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
+ SD ++ ++ PDG LAV L + + +D + A + S+ G H
Sbjct: 540 --LTSDALAV---TFRPDGAELAVATLNSQITFWDPENAVQTGSIEGRH 583
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/254 (24%), Positives = 115/254 (45%)
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGIKLINTID 134
LA+G + +K++ G+ N+ T +R L F GS+ L +A D+ +++ + D
Sbjct: 144 LATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKD 203
Query: 135 -GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G++ +VL+GH+ V AF P+S L S+ + V W++ + L+ D+
Sbjct: 204 DGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHNDVVC- 262
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR------------GDHVQPIC 241
+SPDG LA V+++D TA L L G + + +
Sbjct: 263 ------CEFSPDGALLATASYDTRVIVWDPHTATVLLELGHLFPPPSPIFAGGANDRWVR 316
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGK 301
+++ +G+++A+ + DR + W + +K + +CC A+ G+ L+ G
Sbjct: 317 SVAFCHDGRHIASVTDDRLVRFWSIDEKSPQAIGPLTNGLCC-AFSTDGSVLSAGSRDGS 375
Query: 302 YGVWESVVPSSMKS 315
W S P S+ S
Sbjct: 376 VHFWAS--PRSIAS 387
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/151 (27%), Positives = 70/151 (46%)
Query: 117 MLAAAGDDEG-IKLINTIDGSIARVLKGHKGPVTGLAFDPN-SEYLASIDSIGTVIYWEL 174
+L A G + G IK+ + G + L H V L F P+ S L S T+ W+L
Sbjct: 142 LLLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDL 201
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234
+ N+ +V + + + ++SPD L G V ++D D + L G
Sbjct: 202 KDDG---NMVKV---LRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEG 255
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
H +C +SP+G +AT+S D ++++WD
Sbjct: 256 HHNDVVC-CEFSPDGALLATASYDTRVIVWD 285
>TAIR|locus:2092742 [details] [associations]
symbol:AT3G18060 "AT3G18060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=RCA] [GO:0006833
"water transport" evidence=RCA] [GO:0007030 "Golgi organization"
evidence=RCA] [GO:0007033 "vacuole organization" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009750
"response to fructose stimulus" evidence=RCA] [GO:0009832
"plant-type cell wall biogenesis" evidence=RCA] [GO:0016049 "cell
growth" evidence=RCA] [GO:0030243 "cellulose metabolic process"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:2.120.10.30 InterPro:IPR011042
eggNOG:COG2319 HOGENOM:HOG000162559 EMBL:AB020749 GO:GO:0080008
HSSP:P46680 OMA:LKDQKKC EMBL:AY062436 EMBL:AY114624 IPI:IPI00547687
RefSeq:NP_188434.2 UniGene:At.27343 ProteinModelPortal:Q9LV35
SMR:Q9LV35 IntAct:Q9LV35 PaxDb:Q9LV35 PRIDE:Q9LV35
EnsemblPlants:AT3G18060.1 GeneID:821331 KEGG:ath:AT3G18060
TAIR:At3g18060 InParanoid:Q9LV35 PhylomeDB:Q9LV35
ProtClustDB:CLSN2690551 ArrayExpress:Q9LV35 Genevestigator:Q9LV35
Uniprot:Q9LV35
Length = 609
Score = 167 (63.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 62/245 (25%), Positives = 100/245 (40%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91
L T S T+ +++PL S I H T SPN +ASG + +V+++
Sbjct: 31 LYTNGRSVVTLDLNNPLKVS----IYGEHAYPATVARYSPNGEWIASGDVSGTVRIW--- 83
Query: 92 GGEFQTNITRFTLPI---RV--LAFNKSGSMLAAAGDDEGIKLINTI---DGSIARVLKG 143
G + ++ + + R+ L ++ G + A+GD +G L+ GS G
Sbjct: 84 -GAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDG 142
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWS 203
H V A P + I + G G K + + + +N + ++
Sbjct: 143 HSRRVLSCAIKPTRPF--RIVTCGEDFLVNFYEGPPF-KFKLSSRE---HSNFVNCVRFA 196
Query: 204 PDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD--HVQPICFLSWSPNGKYMATSSLDRQI 261
PDG ++YD T E L L D H I +SWSP+GK + T S D+
Sbjct: 197 PDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSA 256
Query: 262 LIWDV 266
IWD+
Sbjct: 257 KIWDI 261
Score = 46 (21.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 588 GRLPLTPGSQLTWFGFSEEGQLSS-YDSKGILRV 620
G+L T SQ+ F EE ++S YD+K I R+
Sbjct: 360 GKLQRTQNSQIKCFAAHEEEIVTSGYDNK-ISRI 392
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 127 (49.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 66/251 (26%), Positives = 106/251 (42%)
Query: 144 HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWS 203
H G V G+A D + + S G + W+ + REL + D+G S + ++
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKK-RELKSQW----DVGC--SLVKIVYHR 525
Query: 204 PDGETLAVPGLKNDVV--MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQI 261
+G LA + +D V +YD T + + RG H I L +S +GK++ +SS+D +
Sbjct: 526 VNG-LLAT--VADDFVIRLYDVVTLKMVREFRG-HTDRITDLCFSEDGKWVISSSMDGSL 581
Query: 262 LIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVI--DVMGKYGVWESVVPSSMKSPTED 319
IWDV ID D I ++ P + LA D G Y +W V SM S
Sbjct: 582 RIWDVILAKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVY-LW---VNQSMFS---G 634
Query: 320 IPSSRSNYNGLLLFDEEEKEPSTSGSLSDLGEDSHGESEMPSRKRLRKQTXXXXXXXXXX 379
+PS S +G + + K PS S S +D + + + L+ +
Sbjct: 635 LPSVESYASGKDVVNV--KLPSVSALTSSEADDDMDRQVLENSEALQASSFSISQKQIPE 692
Query: 380 XXXXXXXPKTE 390
PK++
Sbjct: 693 LVTLSLLPKSQ 703
Score = 92 (37.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 34/147 (23%), Positives = 63/147 (42%)
Query: 3 VRSVKLRE---AHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH 59
V ++KL E + + + ++ + L+ + S ISI + L L ++R
Sbjct: 207 VHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWN-LNKKRLQSVIRD 265
Query: 60 -HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF----TLPIRVLAFNKS 114
H + +L N L S S D+S+K++ F + + RF + P + F +
Sbjct: 266 AHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSN 325
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVL 141
G + +AG D +L + I +R L
Sbjct: 326 GRHILSAGQDRAFRLFSVIQEQQSREL 352
Score = 75 (31.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/137 (24%), Positives = 55/137 (40%)
Query: 32 LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNST-CLASGSIDHSVKLYKF 90
+V ++ I +H+ L + R VTAL+ S + LASG + ++
Sbjct: 195 VVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNL 254
Query: 91 PGGEFQTNIT-RFTLPIRVLAFNKSGSMLAAAGDDEGIKL--INTIDGS--IARVLKGHK 145
Q+ I I L F + +L +A D +K+ +T DG + R GH
Sbjct: 255 NKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHS 314
Query: 146 GPVTGLAFDPNSEYLAS 162
P + F N ++ S
Sbjct: 315 APPLCIRFYSNGRHILS 331
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/258 (22%), Positives = 114/258 (44%)
Query: 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTAL---ALSP 71
G++ + + ++ L +AS+ +T +++ D + K L+ H V + P
Sbjct: 134 GHSGAVMELHYNTDGSMLFSASTDKT-VAVWDSETGERV-KRLKGHTSFVNSCYPARRGP 191
Query: 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLA--FNKSGSMLAAAGDDEGIKL 129
C +GS D +VKL+ + + F +VLA FN + + + G D IK+
Sbjct: 192 QLVC--TGSDDGTVKLWDI---RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 246
Query: 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAP- 188
+ + ++GH VTGL+ YL S TV W+++ ++
Sbjct: 247 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQG 306
Query: 189 DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248
++ + ++ SWSPDG +A V ++D + L+ L G H + L++ P
Sbjct: 307 NVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPG-HAGSVNELAFHPE 365
Query: 249 GKYMATSSLDRQILIWDV 266
+ ++S D+++ + ++
Sbjct: 366 EPIILSASSDKRLYMGEI 383
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 55/250 (22%), Positives = 103/250 (41%)
Query: 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-EFQTNITRFTLPIRVLAFNKS 114
+L H V P LAS D + L+ G + + + + L +N
Sbjct: 88 LLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 147
Query: 115 GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-GTVIYWE 173
GSML +A D+ + + ++ G + LKGH V L S GTV W+
Sbjct: 148 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233
++ K+ A + + ++++ + + G+ ND+ ++D + +++R
Sbjct: 208 IR--------KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 259
Query: 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR---------QKFDDRICCM 284
G H + LS S G Y+ ++++D + IWDV +R F+ +
Sbjct: 260 G-HADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 318
Query: 285 AWKPIGNALA 294
+W P G+ +A
Sbjct: 319 SWSPDGSKIA 328
Score = 129 (50.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 41/151 (27%), Positives = 68/151 (45%)
Query: 33 VTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK--- 89
+ + + I + D L + L +R H D VT L+LS + L S ++D++V+++
Sbjct: 235 IISGGIDNDIKVWD-LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRP 293
Query: 90 FPGGE-----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH 144
F E FQ N+ F + +++ GS +A D + + +T I L GH
Sbjct: 294 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGH 353
Query: 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175
G V LAF P + S S + E+Q
Sbjct: 354 AGSVNELAFHPEEPIILSASSDKRLYMGEIQ 384
>WB|WBGene00010685 [details] [associations]
symbol:aipl-1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IGI] [GO:0032880 "regulation of
protein localization" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0007015 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0032880
GeneTree:ENSGT00390000009416 HOGENOM:HOG000162559 OMA:LKDQKKC
HSSP:Q11176 EMBL:Z81099 PIR:T23497 RefSeq:NP_506733.1
ProteinModelPortal:O17939 SMR:O17939 STRING:O17939 PaxDb:O17939
EnsemblMetazoa:K08F9.2.1 EnsemblMetazoa:K08F9.2.2 GeneID:180022
KEGG:cel:CELE_K08F9.2 UCSC:K08F9.2.1 CTD:180022 WormBase:K08F9.2
InParanoid:O17939 NextBio:907784 Uniprot:O17939
Length = 600
Score = 164 (62.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 59/252 (23%), Positives = 112/252 (44%)
Query: 23 ILWDQQAHHLVTASSSETTISIHDPLLPSNLPK-ILRHHRDGVTALALSPNSTC-LASGS 80
I WD ++ + + H LL + L + ++ P + SGS
Sbjct: 109 IAWDSESKRIAAVGEGKERFG-HVFLLDTTTSNGSLTGQSRTMNSVDFKPTRPFRIISGS 167
Query: 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140
D++V +++ P +F+ ++ +N GS+ A+ G D + L N +DG V
Sbjct: 168 DDNTVAIFEGPPFKFKHTFDHHKKFVQSTRYNNDGSLFASTGSDGTVVLYNGVDGEKVGV 227
Query: 141 L---KG--HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPS 195
L KG H G + LA+ P+ +A+ + +V W++ S R+L + I +
Sbjct: 228 LEDAKGVAHTGSIFALAWSPDQSRIATASADKSVKIWDV-SARKLERTIVMGSKI--EDQ 284
Query: 196 SMNVLSWSPDGE-TLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254
+ ++ W+ T++V G N + D + EK+ R H + I LS S +GK++ +
Sbjct: 285 QLGIV-WTKSALITVSVSGFLN-FLNPDDGSVEKI---RQGHNKAITALSKSSDGKFLFS 339
Query: 255 SSLDRQILIWDV 266
+ + I W++
Sbjct: 340 ADAEGHITTWEI 351
Score = 146 (56.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 63/267 (23%), Positives = 110/267 (41%)
Query: 47 PLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE--FQTNITRFTL 104
P+ N I H T +SP ASG +++++ + I F+
Sbjct: 45 PIDSLNSADIYTEHAHQTTVAKISPTGFYCASGDTQGNIRIWDTTQSTHILKHTIPVFSG 104
Query: 105 PIRVLAFNKSGSMLAAAGDD-EGIKLINTIDGSIAR-VLKGHKGPVTGLAFDPNSEY-LA 161
P++ +A++ +AA G+ E + +D + + L G + + F P + +
Sbjct: 105 PVKDIAWDSESKRIAAVGEGKERFGHVFLLDTTTSNGSLTGQSRTMNSVDFKPTRPFRII 164
Query: 162 SIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221
S TV +E + H + S ++ DG A G VV+Y
Sbjct: 165 SGSDDNTVAIFEGPPFKFKHTFDHHKKFVQST-------RYNNDGSLFASTGSDGTVVLY 217
Query: 222 DRDTAEKLFSL---RG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLD---ID 273
+ EK+ L +G H I L+WSP+ +AT+S D+ + IWDV +KL+ +
Sbjct: 218 NGVDGEKVGVLEDAKGVAHTGSIFALAWSPDQSRIATASADKSVKIWDVSARKLERTIVM 277
Query: 274 RQKFDDRICCMAWKPIGNALAVIDVMG 300
K +D+ + W +AL + V G
Sbjct: 278 GSKIEDQQLGIVWTK--SALITVSVSG 302
Score = 136 (52.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFT-LPIRVLAFNKSGSML 118
H + ALA SP+ + +A+ S D SVK++ + + I + + + L + S L
Sbjct: 236 HTGSIFALAWSPDQSRIATASADKSVKIWDVSARKLERTIVMGSKIEDQQLGIVWTKSAL 295
Query: 119 AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178
+ +N DGS+ ++ +GH +T L+ + ++L S D+ G + WE+ SG
Sbjct: 296 ITVSVSGFLNFLNPDDGSVEKIRQGHNKAITALSKSSDGKFLFSADAEGHITTWEISSGT 355
Query: 179 ELHNLKRVAPDIGSDPSS 196
G+ SS
Sbjct: 356 SSRKSPHTTMITGAQTSS 373
Score = 121 (47.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 149 TGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGET 208
T +AF +A V ++L L LK++ + + +S+S DGE
Sbjct: 440 TCVAFCAEKSLVAVGGKDAKVHVYKLNGDGRLEELKKI-----EHSAEITAVSFSDDGEY 494
Query: 209 LAVPGLKNDVVMYDRDTAEKLFSLRG--DHVQPICFLSWSPNGKYMATSSLDRQILIWDV 266
LAV L V+ Y T + S H + ++WSP+ + +AT S+D ++IWD+
Sbjct: 495 LAVTDLARKVIPYSVSTDFSVTSPNSWTFHTSKVLTVAWSPDNQRLATGSIDTSVIIWDM 554
Query: 267 GK 268
K
Sbjct: 555 KK 556
Score = 78 (32.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 209 LAVPGLKNDVVMYDRDTAEKLFSLRG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVG 267
+AV G V +Y + +L L+ +H I +S+S +G+Y+A + L R+++ + V
Sbjct: 451 VAVGGKDAKVHVYKLNGDGRLEELKKIEHSAEITAVSFSDDGEYLAVTDLARKVIPYSVS 510
Query: 268 KKLDIDRQK---FD-DRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310
+ F ++ +AW P LA + +W+ P
Sbjct: 511 TDFSVTSPNSWTFHTSKVLTVAWSPDNQRLATGSIDTSVIIWDMKKP 557
Score = 61 (26.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 34/140 (24%), Positives = 60/140 (42%)
Query: 4 RSVKLRE--AHKCGNAASFCSILWDQQAHHLVTASSSETTISIH---DPLLPSN--LPKI 56
+SVK+ + A K S + DQQ +V S+ T+S+ + L P + + KI
Sbjct: 259 KSVKIWDVSARKLERTIVMGSKIEDQQLG-IVWTKSALITVSVSGFLNFLNPDDGSVEKI 317
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
+ H +TAL+ S + L S + + ++ G T+ I + +G
Sbjct: 318 RQGHNKAITALSKSSDGKFLFSADAEGHITTWEISSGTSSRKSPHTTM-ITGAQTSSNGD 376
Query: 117 MLAAAGDDEGIKLINTIDGS 136
+ DD+ +K+ DGS
Sbjct: 377 LFTVGWDDQ-LKIT---DGS 392
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 165 (63.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 48/192 (25%), Positives = 88/192 (45%)
Query: 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90
+L+ + S ++TI + LL + R H V + +P+ S S D + +L+
Sbjct: 463 NLLLSCSEDSTIRLWS-LLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT 521
Query: 91 PGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTG 150
+ + + F+ + + +A D ++L + + G R++ GHKG V+
Sbjct: 522 DSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSS 581
Query: 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210
LAF YLAS +I W+L +G + L R S++ +++S DG LA
Sbjct: 582 LAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR-------HTSTVTTITFSRDGTVLA 634
Query: 211 VPGLKNDVVMYD 222
GL N++ ++D
Sbjct: 635 AAGLDNNLTLWD 646
Score = 163 (62.4 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 53/228 (23%), Positives = 98/228 (42%)
Query: 80 SIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIAR 139
S D +V++ GE ++ T P+ AF ++L + +D I+L + + S
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 140 VLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNV 199
+GH PV + F P+ Y S T W S + L RV +G S ++
Sbjct: 487 TYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQAL----RVF--VGH-LSDVDC 539
Query: 200 LSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDR 259
+ + P+ +A V ++D T + + + G H + L++S G+Y+A+ S+D
Sbjct: 540 VQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTG-HKGSVSSLAFSACGRYLASGSVDH 598
Query: 260 QILIWDVGK-KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE 306
I+IWD+ L + + + + G LA + +W+
Sbjct: 599 NIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 158 (60.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 49/212 (23%), Positives = 89/212 (41%)
Query: 57 LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116
L H V A +P L S S D +++L+ P+ + F G
Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGY 505
Query: 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176
+ D+ +L T RV GH V + F PNS Y+A+ S TV W+ +
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMT 565
Query: 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236
G+ + + S++ L++S G LA + ++++++D + +L H
Sbjct: 566 GQSVRLMT-------GHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR-H 617
Query: 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
+ +++S +G +A + LD + +WD K
Sbjct: 618 TSTVTTITFSRDGTVLAAAGLDNNLTLWDFHK 649
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 163 (62.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 55/232 (23%), Positives = 106/232 (45%)
Query: 40 TTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI 99
T +S H PL +N P G+ ++ + + +A+G +D + L+ P G+ + +
Sbjct: 210 TQLSSH-PLHKTNKP--------GICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTL 260
Query: 100 TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLI-NTIDGSIA--RVLKGHKGPVTGLAFDPN 156
T + + + F ++ A D+ +++ N DG+ A L H V + P
Sbjct: 261 TGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPT 320
Query: 157 SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN 216
++Y S GT +++L SG L +V+ D S ++ PDG L ++
Sbjct: 321 NKYFVSASLDGTWCFYDLSSGS---CLAQVSDD--SKNVDYTAAAFHPDGLILGTGTSQS 375
Query: 217 DVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268
V ++D + + G H + +S+S NG ++AT++ D + +WD+ K
Sbjct: 376 VVKIWDVKSQANVAKFDG-HTGEVTAISFSENGYFLATAAEDG-VRLWDLRK 425
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 61/261 (23%), Positives = 109/261 (41%)
Query: 32 LVTASSSETTISIHDPLLPSNLP--KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89
LV +S++ T+ I N L H V A+ + P + S S+D + Y
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYD 337
Query: 90 FPGGEFQTNITRFTLPI--RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGP 147
G ++ + + AF+ G +L +K+ + + GH G
Sbjct: 338 LSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGE 397
Query: 148 VTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE 207
VT ++F N +LA+ G V W+L R+L N K + +D +S+ + P G
Sbjct: 398 VTAISFSENGYFLATAAEDG-VRLWDL---RKLRNFKSF---LSADANSVE---FDPSGS 447
Query: 208 TLAVPGLKNDVVMYDRDT--AE-----KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQ 260
L + +D+ +Y + AE L L G + C + + + +Y+A S+DR
Sbjct: 448 YLGIAA--SDIKVYQTASVKAEWNLIKTLPDLSGTG-KATC-VKFGSDAQYVAVGSMDRN 503
Query: 261 ILIWDV-G-KKLDIDRQKFDD 279
+ I+ + G +K ++D D
Sbjct: 504 LRIFGLPGDEKANVDDDSAQD 524
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 161 (61.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 60/252 (23%), Positives = 111/252 (44%)
Query: 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGIKLINTID 134
LA+G + +K++ G+ N+ T +R L F GS+ L +A D+ +++ + D
Sbjct: 143 LATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKD 202
Query: 135 -GSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD 193
G++ +VL+GH+ V AF P+S L S+ + V W + + L+ D+ +
Sbjct: 203 DGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVA- 261
Query: 194 PSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR------------GDHVQPIC 241
+SPDG LA V ++D T L G + + +
Sbjct: 262 ------CDFSPDGALLATASYDTRVYIWDPHTGAILMEFGHLFPPPTPIFAGGANDRWVR 315
Query: 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGK 301
+S+S +G ++A+ + D+ + W + + + + +CC A+ G+ LA G
Sbjct: 316 SVSFSHDGLHVASLADDKMVRFWRIDEDYPVQVAPLSNGLCC-AFSTDGSVLAAGTHDGS 374
Query: 302 YGVWESV--VPS 311
W + VPS
Sbjct: 375 VYFWATPRQVPS 386
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 41/151 (27%), Positives = 68/151 (45%)
Query: 117 MLAAAGDDEG-IKLINTIDGSIARVLKGHKGPVTGLAFDPN-SEYLASIDSIGTVIYWEL 174
+L A G + G IK+ + G + L H V L F P+ S L S T+ W+L
Sbjct: 141 LLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDL 200
Query: 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234
+ N+ +V + + + ++SPD L G V +++ D + L G
Sbjct: 201 KDDG---NMMKV---LRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWD 265
H + +SP+G +AT+S D ++ IWD
Sbjct: 255 HH-HDVVACDFSPDGALLATASYDTRVYIWD 284
WARNING: HSPs involving 547 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 945 918 0.00090 122 3 11 23 0.44 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 797
No. of states in DFA: 631 (67 KB)
Total size of DFA: 454 KB (2215 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 88.06u 0.12s 88.18t Elapsed: 00:00:04
Total cpu time: 88.15u 0.13s 88.28t Elapsed: 00:00:04
Start: Sat May 11 08:19:31 2013 End: Sat May 11 08:19:35 2013
WARNINGS ISSUED: 2