Query 002266
Match_columns 945
No_of_seqs 941 out of 3391
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:21:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002266.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002266hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 3.4E-40 1.2E-44 379.9 41.8 283 15-307 106-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 1.1E-39 3.8E-44 363.0 41.7 285 15-308 30-320 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 8.7E-39 3E-43 358.2 44.0 286 10-306 49-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 1.7E-38 5.9E-43 350.0 41.0 294 1-308 1-301 (304)
5 4gqb_B Methylosome protein 50; 100.0 1.2E-38 4.1E-43 358.6 38.8 287 15-310 28-332 (344)
6 4g56_B MGC81050 protein; prote 100.0 1.3E-38 4.4E-43 359.9 38.3 289 15-311 40-345 (357)
7 2pbi_B Guanine nucleotide-bind 100.0 1.4E-37 4.7E-42 350.9 42.3 283 15-306 62-354 (354)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-37 3.7E-42 350.2 40.8 290 15-312 13-338 (345)
9 3frx_A Guanine nucleotide-bind 100.0 3.7E-37 1.3E-41 342.0 41.2 291 6-309 7-317 (319)
10 4ery_A WD repeat-containing pr 100.0 5.1E-37 1.7E-41 338.2 41.6 284 15-307 21-310 (312)
11 3iz6_a 40S ribosomal protein R 100.0 1.4E-37 4.9E-42 354.0 33.0 287 15-310 64-376 (380)
12 1erj_A Transcriptional repress 100.0 1.6E-36 5.4E-41 347.0 41.1 289 15-308 62-388 (393)
13 2hes_X YDR267CP; beta-propelle 100.0 4.5E-36 1.5E-40 334.9 41.0 287 10-308 8-327 (330)
14 2xzm_R RACK1; ribosome, transl 100.0 7E-36 2.4E-40 334.8 40.8 285 11-309 16-340 (343)
15 1gxr_A ESG1, transducin-like e 100.0 2.1E-35 7.1E-40 326.0 42.7 282 15-308 49-336 (337)
16 1nr0_A Actin interacting prote 100.0 6.3E-36 2.2E-40 362.3 41.0 293 15-311 145-569 (611)
17 2ymu_A WD-40 repeat protein; u 100.0 9E-34 3.1E-38 338.9 58.5 289 6-308 4-333 (577)
18 4aow_A Guanine nucleotide-bind 100.0 8.3E-35 2.8E-39 322.4 42.2 296 4-311 26-339 (340)
19 1nr0_A Actin interacting prote 100.0 1.6E-35 5.5E-40 358.7 38.9 296 4-311 5-357 (611)
20 3zwl_B Eukaryotic translation 100.0 2E-34 6.7E-39 322.0 42.2 283 15-309 30-346 (369)
21 1sq9_A Antiviral protein SKI8; 100.0 3.8E-35 1.3E-39 333.2 36.3 301 1-310 1-396 (397)
22 2ymu_A WD-40 repeat protein; u 100.0 9.8E-35 3.3E-39 347.3 41.4 277 15-306 301-577 (577)
23 2ynn_A Coatomer subunit beta'; 100.0 2.1E-34 7.2E-39 317.3 38.7 253 53-312 5-262 (304)
24 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-34 5.8E-39 324.1 37.0 286 15-310 6-362 (372)
25 3i2n_A WD repeat-containing pr 100.0 3.3E-35 1.1E-39 327.5 30.8 289 15-311 16-355 (357)
26 3dm0_A Maltose-binding peripla 100.0 3.2E-34 1.1E-38 352.4 41.3 283 15-308 380-692 (694)
27 3sfz_A APAF-1, apoptotic pepti 100.0 1.3E-32 4.6E-37 359.3 58.4 295 15-312 613-995 (1249)
28 3k26_A Polycomb protein EED; W 100.0 1.3E-34 4.3E-39 323.6 32.4 289 15-308 16-365 (366)
29 3ei3_B DNA damage-binding prot 100.0 6.7E-34 2.3E-38 322.4 36.2 280 15-309 71-382 (383)
30 1vyh_C Platelet-activating fac 100.0 8.6E-34 2.9E-38 326.4 36.5 251 54-312 101-372 (410)
31 3vl1_A 26S proteasome regulato 100.0 3.8E-34 1.3E-38 327.8 33.4 289 18-310 57-366 (420)
32 1r5m_A SIR4-interacting protei 100.0 7.4E-34 2.5E-38 323.8 34.6 280 16-308 107-424 (425)
33 3ow8_A WD repeat-containing pr 100.0 1.4E-33 4.7E-38 313.9 35.7 243 15-267 78-320 (321)
34 3odt_A Protein DOA1; ubiquitin 100.0 6.6E-33 2.3E-37 302.9 39.8 278 15-311 16-298 (313)
35 3dwl_C Actin-related protein 2 100.0 3.6E-35 1.2E-39 331.5 22.4 293 10-307 5-377 (377)
36 1gxr_A ESG1, transducin-like e 100.0 1.4E-33 4.9E-38 311.2 34.3 285 16-312 8-299 (337)
37 1r5m_A SIR4-interacting protei 100.0 1.8E-33 6.2E-38 320.5 35.9 282 16-309 44-361 (425)
38 2pm9_A Protein WEB1, protein t 100.0 2.3E-34 8E-39 328.4 28.0 288 15-310 65-415 (416)
39 1got_B GT-beta; complex (GTP-b 100.0 6E-33 2E-37 310.7 38.7 251 53-312 47-304 (340)
40 3vl1_A 26S proteasome regulato 100.0 3.9E-33 1.3E-37 319.4 36.1 283 18-309 98-419 (420)
41 4e54_B DNA damage-binding prot 100.0 7.7E-34 2.6E-38 329.1 29.3 293 10-311 113-432 (435)
42 2pm9_A Protein WEB1, protein t 100.0 9.8E-34 3.3E-38 323.3 29.7 294 18-312 13-340 (416)
43 3gre_A Serine/threonine-protei 100.0 1.2E-33 4.1E-38 326.2 30.7 284 15-306 61-437 (437)
44 1pgu_A Actin interacting prote 100.0 1.3E-30 4.3E-35 313.0 57.1 283 15-310 16-329 (615)
45 4aez_A CDC20, WD repeat-contai 100.0 1.2E-32 4.3E-37 315.1 36.7 281 20-314 96-385 (401)
46 3dw8_B Serine/threonine-protei 100.0 3.8E-33 1.3E-37 321.9 32.3 288 15-307 26-444 (447)
47 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-32 4.7E-37 342.6 39.4 296 1-309 1-302 (814)
48 4gqb_B Methylosome protein 50; 100.0 2E-32 6.9E-37 307.8 35.2 245 16-271 81-334 (344)
49 4h5i_A Guanine nucleotide-exch 100.0 7.4E-33 2.5E-37 313.7 30.5 281 18-308 15-342 (365)
50 4a11_B DNA excision repair pro 100.0 1.7E-31 5.8E-36 302.9 41.1 301 10-313 37-369 (408)
51 3v7d_B Cell division control p 100.0 2.2E-31 7.6E-36 309.7 41.9 282 15-314 119-426 (464)
52 2pm7_B Protein transport prote 100.0 5E-32 1.7E-36 297.3 33.7 249 55-309 3-285 (297)
53 2pbi_B Guanine nucleotide-bind 100.0 9.8E-32 3.4E-36 303.0 36.9 252 53-312 56-318 (354)
54 4ery_A WD repeat-containing pr 100.0 4.2E-31 1.4E-35 290.9 39.3 253 53-312 15-271 (312)
55 1yfq_A Cell cycle arrest prote 100.0 5E-32 1.7E-36 300.6 31.6 278 15-306 9-321 (342)
56 4gga_A P55CDC, cell division c 100.0 4.2E-31 1.4E-35 304.5 40.0 281 20-311 108-397 (420)
57 2pm7_B Protein transport prote 100.0 1.8E-31 6.3E-36 292.8 35.1 250 15-268 7-285 (297)
58 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-31 5.7E-36 299.8 34.8 254 53-311 7-285 (345)
59 3frx_A Guanine nucleotide-bind 100.0 3.9E-31 1.3E-35 293.4 37.3 246 54-309 10-267 (319)
60 2xzm_R RACK1; ribosome, transl 100.0 6.1E-31 2.1E-35 294.6 39.2 252 53-312 13-288 (343)
61 2hes_X YDR267CP; beta-propelle 100.0 3.5E-31 1.2E-35 295.3 34.7 245 16-268 57-328 (330)
62 4ggc_A P55CDC, cell division c 100.0 1.1E-30 3.7E-35 286.4 37.7 279 20-309 28-315 (318)
63 3iz6_a 40S ribosomal protein R 100.0 6.3E-32 2.2E-36 307.4 28.8 255 15-270 106-377 (380)
64 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-32 5.5E-37 325.3 24.8 287 16-309 132-517 (524)
65 1pgu_A Actin interacting prote 100.0 1.8E-30 6.2E-35 311.6 42.6 290 15-309 158-614 (615)
66 4g56_B MGC81050 protein; prote 100.0 1.6E-31 5.4E-36 301.8 30.1 244 15-269 92-344 (357)
67 1p22_A F-BOX/WD-repeat protein 100.0 5.1E-31 1.7E-35 305.1 34.6 279 9-312 126-417 (435)
68 1erj_A Transcriptional repress 100.0 9.5E-31 3.2E-35 299.1 36.2 247 18-268 124-389 (393)
69 3bg1_A Protein SEC13 homolog; 100.0 1.5E-31 5.2E-36 296.3 28.6 251 54-309 6-293 (316)
70 3mmy_A MRNA export factor; mRN 100.0 5.9E-31 2E-35 293.7 33.7 283 15-308 37-345 (368)
71 2aq5_A Coronin-1A; WD40 repeat 100.0 2.9E-31 1E-35 303.4 31.2 283 20-310 37-343 (402)
72 3sfz_A APAF-1, apoptotic pepti 100.0 2.3E-29 7.8E-34 328.8 52.2 287 15-312 655-1077(1249)
73 3jrp_A Fusion protein of prote 100.0 1.3E-30 4.3E-35 292.6 33.0 252 53-310 3-288 (379)
74 3f3f_A Nucleoporin SEH1; struc 100.0 5.1E-30 1.7E-34 282.5 36.6 258 54-312 4-340 (351)
75 3f3f_A Nucleoporin SEH1; struc 100.0 1.9E-30 6.4E-35 286.0 32.3 252 15-273 9-342 (351)
76 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.3E-29 8E-34 291.6 42.1 274 15-312 116-394 (445)
77 3bg1_A Protein SEC13 homolog; 100.0 2.4E-31 8.1E-36 294.7 23.9 244 15-267 11-292 (316)
78 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-29 7.1E-34 292.0 40.6 274 15-309 157-442 (445)
79 3v7d_B Cell division control p 100.0 2.4E-29 8.2E-34 292.6 41.2 274 15-306 160-460 (464)
80 3jrp_A Fusion protein of prote 100.0 3E-30 1E-34 289.6 32.0 251 15-269 9-288 (379)
81 2oaj_A Protein SNI1; WD40 repe 100.0 6.4E-30 2.2E-34 322.6 36.5 208 15-228 15-245 (902)
82 3zwl_B Eukaryotic translation 100.0 1.8E-29 6.1E-34 281.8 35.9 257 54-312 25-307 (369)
83 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-29 5.1E-34 319.3 38.4 290 15-310 56-606 (902)
84 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-29 8.6E-34 281.9 34.0 249 56-309 3-274 (372)
85 3dm0_A Maltose-binding peripla 100.0 3.3E-29 1.1E-33 307.8 37.3 251 55-311 376-634 (694)
86 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.9E-29 1.3E-33 290.7 34.9 281 18-308 5-390 (450)
87 3mkq_A Coatomer beta'-subunit; 100.0 5.9E-29 2E-33 309.8 37.3 282 15-308 53-385 (814)
88 3k26_A Polycomb protein EED; W 100.0 1.1E-29 3.6E-34 283.6 27.2 241 16-268 68-366 (366)
89 4aez_A CDC20, WD repeat-contai 100.0 5E-29 1.7E-33 285.1 33.1 247 15-274 132-386 (401)
90 4aow_A Guanine nucleotide-bind 100.0 3.1E-28 1.1E-32 269.4 38.2 250 53-310 30-287 (340)
91 1sq9_A Antiviral protein SKI8; 100.0 2.3E-29 7.7E-34 285.5 29.4 253 15-270 60-397 (397)
92 3dwl_C Actin-related protein 2 100.0 2.4E-30 8.2E-35 292.0 21.1 244 56-308 6-280 (377)
93 3dw8_B Serine/threonine-protei 100.0 4.1E-29 1.4E-33 288.1 30.3 250 59-311 26-375 (447)
94 3i2n_A WD repeat-containing pr 100.0 3.9E-29 1.3E-33 278.4 28.6 252 15-271 63-356 (357)
95 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-29 8.5E-34 292.8 26.2 264 17-308 15-296 (588)
96 2xyi_A Probable histone-bindin 100.0 1.3E-28 4.5E-33 284.7 31.8 245 56-308 123-409 (430)
97 3gre_A Serine/threonine-protei 100.0 1.5E-29 5.1E-34 291.9 23.4 272 25-311 35-361 (437)
98 3ei3_B DNA damage-binding prot 100.0 1.3E-28 4.4E-33 278.9 30.5 246 15-268 116-382 (383)
99 3odt_A Protein DOA1; ubiquitin 100.0 7.5E-28 2.6E-32 262.8 35.3 251 46-312 3-258 (313)
100 4gga_A P55CDC, cell division c 100.0 5.9E-28 2E-32 278.1 34.3 247 15-274 145-401 (420)
101 3bws_A Protein LP49; two-domai 100.0 1E-27 3.4E-32 275.8 35.9 279 18-308 123-431 (433)
102 4a11_B DNA excision repair pro 100.0 1.2E-27 4E-32 271.2 33.6 286 15-308 97-404 (408)
103 3jro_A Fusion protein of prote 100.0 1.6E-28 5.4E-33 304.7 28.8 251 55-311 3-287 (753)
104 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-27 4.4E-32 269.4 31.7 283 15-311 17-338 (355)
105 1yfq_A Cell cycle arrest prote 100.0 9.1E-28 3.1E-32 266.2 29.5 245 56-312 6-285 (342)
106 4h5i_A Guanine nucleotide-exch 100.0 1E-27 3.6E-32 271.4 30.1 248 15-269 71-344 (365)
107 2aq5_A Coronin-1A; WD40 repeat 100.0 1.3E-27 4.4E-32 273.2 30.1 247 15-270 79-344 (402)
108 4e54_B DNA damage-binding prot 100.0 2.6E-28 9E-33 282.6 24.3 252 15-271 162-433 (435)
109 2xyi_A Probable histone-bindin 100.0 1.2E-27 3.9E-32 276.8 29.5 246 15-269 126-411 (430)
110 1l0q_A Surface layer protein; 100.0 2.6E-26 8.9E-31 260.2 39.4 269 30-312 2-278 (391)
111 3jro_A Fusion protein of prote 100.0 4.7E-28 1.6E-32 300.5 26.7 250 15-269 7-286 (753)
112 3lrv_A PRE-mRNA-splicing facto 100.0 8.1E-28 2.8E-32 269.0 25.2 265 25-306 44-330 (343)
113 4gq1_A NUP37; propeller, trans 100.0 1.7E-27 5.8E-32 272.3 26.9 287 18-307 16-387 (393)
114 2j04_B YDR362CP, TAU91; beta p 100.0 6.3E-28 2.2E-32 286.0 23.7 245 15-269 205-518 (524)
115 4ggc_A P55CDC, cell division c 100.0 5E-26 1.7E-30 249.2 34.1 242 15-269 65-316 (318)
116 1p22_A F-BOX/WD-repeat protein 99.9 1.7E-26 6E-31 266.9 28.8 251 15-287 171-433 (435)
117 2j04_A TAU60, YPL007P, hypothe 99.9 9.3E-27 3.2E-31 271.2 26.1 257 15-298 50-350 (588)
118 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.9E-26 1.7E-30 264.6 31.2 241 61-307 4-337 (450)
119 3mmy_A MRNA export factor; mRN 99.9 1.1E-25 3.7E-30 250.9 32.2 250 52-312 30-307 (368)
120 1l0q_A Surface layer protein; 99.9 1.2E-24 3.9E-29 246.7 39.7 244 18-275 32-282 (391)
121 3lrv_A PRE-mRNA-splicing facto 99.9 2.3E-26 7.8E-31 257.3 24.1 231 68-310 43-293 (343)
122 3vu4_A KMHSV2; beta-propeller 99.9 1.9E-25 6.4E-30 251.7 29.6 246 44-310 3-272 (355)
123 3bws_A Protein LP49; two-domai 99.9 8.5E-25 2.9E-29 251.3 33.7 284 17-311 60-392 (433)
124 2w18_A PALB2, fancn, partner a 99.9 1.1E-24 3.8E-29 239.4 31.1 277 19-307 41-355 (356)
125 4gq1_A NUP37; propeller, trans 99.9 5.5E-26 1.9E-30 259.7 20.8 243 22-267 94-388 (393)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.1E-24 2.1E-28 244.8 26.2 278 18-308 63-386 (415)
127 3vgz_A Uncharacterized protein 99.9 5.9E-22 2E-26 220.3 37.0 276 17-300 40-335 (353)
128 2w18_A PALB2, fancn, partner a 99.9 3.5E-23 1.2E-27 227.5 26.0 244 15-266 84-355 (356)
129 3u4y_A Uncharacterized protein 99.9 5.6E-22 1.9E-26 219.1 33.2 281 23-311 3-306 (331)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 7E-22 2.4E-26 227.6 33.9 248 29-291 143-410 (415)
131 1nir_A Nitrite reductase; hemo 99.9 5.3E-22 1.8E-26 236.5 33.3 285 20-313 181-518 (543)
132 1ri6_A Putative isomerase YBHE 99.9 9.1E-22 3.1E-26 217.4 31.1 275 28-308 3-307 (343)
133 2ecf_A Dipeptidyl peptidase IV 99.9 1.9E-22 6.5E-27 248.9 28.4 284 17-309 36-413 (741)
134 1nir_A Nitrite reductase; hemo 99.9 2.1E-21 7E-26 231.4 31.7 275 25-312 145-461 (543)
135 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-22 4.7E-27 249.3 21.5 287 18-310 17-394 (723)
136 2z3z_A Dipeptidyl aminopeptida 99.9 2.5E-21 8.7E-26 237.6 31.9 282 18-309 82-435 (706)
137 2ojh_A Uncharacterized protein 99.9 1.1E-21 3.7E-26 210.9 24.6 251 37-300 19-293 (297)
138 1pby_B Quinohemoprotein amine 99.9 3E-21 1E-25 212.6 28.6 268 30-312 2-313 (337)
139 1ri6_A Putative isomerase YBHE 99.9 1.7E-20 5.8E-25 207.1 31.8 272 15-291 35-335 (343)
140 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-20 4.6E-25 232.4 29.4 280 19-307 110-457 (741)
141 1k32_A Tricorn protease; prote 99.9 1.7E-20 5.9E-25 240.9 27.8 277 15-308 201-501 (1045)
142 3u4y_A Uncharacterized protein 99.9 1.6E-19 5.6E-24 199.3 30.3 263 18-290 41-326 (331)
143 3o4h_A Acylamino-acid-releasin 99.9 3.6E-20 1.2E-24 222.4 26.5 268 17-307 21-313 (582)
144 1k32_A Tricorn protease; prote 99.8 9E-20 3.1E-24 234.2 29.3 276 17-311 295-639 (1045)
145 1xfd_A DIP, dipeptidyl aminope 99.8 4.4E-20 1.5E-24 226.9 25.1 275 19-297 62-428 (723)
146 2ojh_A Uncharacterized protein 99.8 6.7E-20 2.3E-24 196.9 23.2 232 15-259 39-293 (297)
147 1jmx_B Amine dehydrogenase; ox 99.8 9.1E-20 3.1E-24 202.0 24.7 282 22-312 4-328 (349)
148 3hfq_A Uncharacterized protein 99.8 9.8E-19 3.3E-23 194.9 32.5 266 38-308 14-316 (347)
149 3vgz_A Uncharacterized protein 99.8 1.5E-18 5.1E-23 192.7 33.3 244 60-312 39-306 (353)
150 2z3z_A Dipeptidyl aminopeptida 99.8 2.9E-19 9.8E-24 219.3 27.0 276 20-309 28-391 (706)
151 1pby_B Quinohemoprotein amine 99.8 3.5E-19 1.2E-23 196.0 24.7 243 19-276 35-318 (337)
152 2oit_A Nucleoporin 214KDA; NH2 99.8 2.8E-18 9.6E-23 198.7 32.3 291 16-309 35-405 (434)
153 3pe7_A Oligogalacturonate lyas 99.8 4.2E-19 1.4E-23 200.6 24.4 279 23-310 41-383 (388)
154 3hfq_A Uncharacterized protein 99.8 3.7E-18 1.3E-22 190.2 29.9 254 17-273 39-324 (347)
155 3scy_A Hypothetical bacterial 99.8 8.1E-18 2.8E-22 188.7 32.2 276 27-308 11-336 (361)
156 1z68_A Fibroblast activation p 99.8 1.6E-19 5.4E-24 222.2 18.7 281 22-309 20-391 (719)
157 3scy_A Hypothetical bacterial 99.8 2.7E-17 9.1E-22 184.5 34.8 263 17-287 49-360 (361)
158 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.8E-17 6E-22 187.0 28.0 275 32-310 5-342 (365)
159 3o4h_A Acylamino-acid-releasin 99.8 3.9E-18 1.3E-22 204.6 22.3 232 60-307 20-274 (582)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.5E-17 1.2E-21 184.6 26.6 248 18-269 40-342 (365)
161 3c5m_A Oligogalacturonate lyas 99.8 4.8E-18 1.6E-22 191.8 18.7 278 19-308 37-381 (396)
162 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-17 4.4E-22 193.1 22.4 250 40-306 23-330 (434)
163 1z68_A Fibroblast activation p 99.7 2.3E-17 8E-22 202.8 21.9 281 19-309 61-443 (719)
164 4a5s_A Dipeptidyl peptidase 4 99.7 7.5E-17 2.6E-21 199.4 25.3 283 18-308 17-397 (740)
165 1jmx_B Amine dehydrogenase; ox 99.7 2.2E-16 7.7E-21 174.6 24.4 246 19-278 44-335 (349)
166 2gop_A Trilobed protease; beta 99.7 1.7E-15 5.9E-20 168.2 28.6 259 18-308 15-330 (347)
167 3azo_A Aminopeptidase; POP fam 99.7 5.5E-16 1.9E-20 188.5 25.5 281 15-307 21-365 (662)
168 3pe7_A Oligogalacturonate lyas 99.7 4.5E-16 1.5E-20 175.6 23.0 256 45-310 15-330 (388)
169 3fvz_A Peptidyl-glycine alpha- 99.7 7.6E-15 2.6E-19 163.0 29.0 244 17-268 23-322 (329)
170 2oiz_A Aromatic amine dehydrog 99.7 4.1E-15 1.4E-19 167.7 27.2 262 22-291 54-360 (361)
171 4a5s_A Dipeptidyl peptidase 4 99.7 7.6E-16 2.6E-20 190.4 22.2 243 63-309 18-353 (740)
172 2oiz_A Aromatic amine dehydrog 99.7 1E-14 3.6E-19 164.4 28.9 275 27-310 13-335 (361)
173 2dg1_A DRP35, lactonase; beta 99.7 6.4E-15 2.2E-19 162.9 26.7 269 18-300 6-301 (333)
174 1q7f_A NHL, brain tumor CG1071 99.7 5.1E-14 1.7E-18 152.2 33.0 243 15-270 27-282 (286)
175 1q7f_A NHL, brain tumor CG1071 99.7 6.1E-14 2.1E-18 151.6 32.8 240 59-309 27-280 (286)
176 3fvz_A Peptidyl-glycine alpha- 99.7 1.5E-14 5.2E-19 160.6 27.9 246 61-308 23-321 (329)
177 3azo_A Aminopeptidase; POP fam 99.7 8.7E-15 3E-19 178.0 26.7 246 22-274 81-375 (662)
178 2z2n_A Virginiamycin B lyase; 99.6 8.5E-13 2.9E-17 142.5 39.1 278 16-308 13-294 (299)
179 3c5m_A Oligogalacturonate lyas 99.6 3E-15 1E-19 168.7 18.9 236 64-310 38-330 (396)
180 3e5z_A Putative gluconolactona 99.6 1.8E-13 6.2E-18 148.8 28.7 238 55-308 21-285 (296)
181 2xdw_A Prolyl endopeptidase; a 99.6 1.8E-13 6E-18 168.4 31.9 276 27-311 81-416 (710)
182 3e5z_A Putative gluconolactona 99.6 1.9E-13 6.5E-18 148.7 28.1 240 16-273 26-291 (296)
183 2xdw_A Prolyl endopeptidase; a 99.6 1.8E-13 6.3E-18 168.2 30.0 247 15-270 122-416 (710)
184 3dsm_A Uncharacterized protein 99.6 9E-13 3.1E-17 146.3 31.6 258 38-311 15-303 (328)
185 2gop_A Trilobed protease; beta 99.6 2.6E-13 8.7E-18 150.6 25.6 228 19-273 60-335 (347)
186 1rwi_B Serine/threonine-protei 99.6 3.8E-13 1.3E-17 143.6 25.8 243 19-271 25-267 (270)
187 2mad_H Methylamine dehydrogena 99.6 3.9E-12 1.3E-16 144.0 35.3 281 23-314 26-355 (373)
188 2bkl_A Prolyl endopeptidase; m 99.6 5.6E-14 1.9E-18 172.4 21.5 272 26-310 76-398 (695)
189 1rwi_B Serine/threonine-protei 99.6 4.8E-13 1.6E-17 142.8 25.8 240 63-311 25-266 (270)
190 1qks_A Cytochrome CD1 nitrite 99.6 8.7E-12 3E-16 148.5 39.3 288 18-312 197-541 (567)
191 2dg1_A DRP35, lactonase; beta 99.6 1.8E-12 6.3E-17 143.0 30.6 248 15-267 42-315 (333)
192 2qc5_A Streptogramin B lactona 99.6 1.4E-11 4.9E-16 132.8 36.9 276 16-307 18-298 (300)
193 2bkl_A Prolyl endopeptidase; m 99.5 1.8E-13 6.1E-18 167.9 22.8 249 15-273 118-402 (695)
194 3dsm_A Uncharacterized protein 99.5 1.8E-12 6.1E-17 143.9 28.3 255 18-288 44-321 (328)
195 1qks_A Cytochrome CD1 nitrite 99.5 1.3E-11 4.3E-16 147.1 35.4 272 29-310 166-478 (567)
196 3sjl_D Methylamine dehydrogena 99.5 4.5E-12 1.5E-16 142.6 27.6 281 23-313 38-367 (386)
197 3no2_A Uncharacterized protein 99.5 4.1E-12 1.4E-16 137.6 26.5 218 72-297 4-231 (276)
198 1yr2_A Prolyl oligopeptidase; 99.5 1.6E-12 5.4E-17 160.7 25.7 274 26-310 115-442 (741)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.8E-11 6.3E-16 133.4 29.2 258 1-268 1-299 (314)
200 3c75_H MADH, methylamine dehyd 99.5 1E-11 3.5E-16 142.0 27.0 279 27-314 82-407 (426)
201 2z2n_A Virginiamycin B lyase; 99.5 9.2E-11 3.2E-15 126.3 33.3 236 60-307 13-253 (299)
202 3no2_A Uncharacterized protein 99.4 8.7E-12 3E-16 135.0 24.5 213 29-256 5-231 (276)
203 1yr2_A Prolyl oligopeptidase; 99.4 4.4E-12 1.5E-16 156.7 24.6 244 18-272 163-445 (741)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3E-11 1E-15 131.6 28.5 238 61-310 17-300 (314)
205 2mad_H Methylamine dehydrogena 99.4 2E-10 6.9E-15 129.8 33.9 254 22-284 70-367 (373)
206 3sjl_D Methylamine dehydrogena 99.4 2.2E-11 7.7E-16 136.9 24.1 261 22-289 82-384 (386)
207 3hrp_A Uncharacterized protein 99.4 1.2E-10 4.1E-15 133.4 29.2 240 62-307 131-408 (409)
208 3g4e_A Regucalcin; six bladed 99.4 2.9E-10 1E-14 123.9 29.2 229 18-257 13-261 (297)
209 3g4e_A Regucalcin; six bladed 99.3 6.5E-10 2.2E-14 121.2 29.5 224 63-298 14-261 (297)
210 2qc5_A Streptogramin B lactona 99.3 1.9E-09 6.5E-14 116.0 32.8 236 61-307 19-258 (300)
211 3dr2_A Exported gluconolactona 99.3 3.8E-10 1.3E-14 123.4 25.6 234 16-265 43-303 (305)
212 3hrp_A Uncharacterized protein 99.3 9.8E-10 3.4E-14 125.8 28.3 242 18-266 131-408 (409)
213 3dr2_A Exported gluconolactona 99.3 7.2E-10 2.5E-14 121.2 26.0 235 54-303 37-301 (305)
214 3iuj_A Prolyl endopeptidase; h 99.3 5.3E-10 1.8E-14 137.0 27.2 243 15-271 126-408 (693)
215 2ghs_A AGR_C_1268P; regucalcin 99.3 4.8E-09 1.6E-13 116.0 32.4 220 64-299 51-292 (326)
216 3c75_H MADH, methylamine dehyd 99.3 2.6E-10 8.9E-15 130.3 22.6 260 22-289 122-423 (426)
217 1xip_A Nucleoporin NUP159; bet 99.3 6.1E-11 2.1E-15 133.8 16.9 179 18-211 38-230 (388)
218 2ghs_A AGR_C_1268P; regucalcin 99.3 3.6E-09 1.2E-13 117.0 30.9 225 19-257 50-291 (326)
219 1xip_A Nucleoporin NUP159; bet 99.2 1.3E-10 4.3E-15 131.2 19.0 174 63-256 39-232 (388)
220 2qe8_A Uncharacterized protein 99.2 2.2E-10 7.7E-15 127.7 18.9 260 18-301 17-313 (343)
221 3iuj_A Prolyl endopeptidase; h 99.2 4.5E-10 1.5E-14 137.6 22.1 237 60-309 127-405 (693)
222 1mda_H Methylamine dehydrogena 99.2 4E-10 1.4E-14 126.6 18.8 268 28-313 30-350 (368)
223 1yiq_A Quinohemoprotein alcoho 99.1 3.1E-09 1.1E-13 129.8 24.3 280 29-313 70-509 (689)
224 1kb0_A Quinohemoprotein alcoho 99.1 4.9E-09 1.7E-13 127.8 24.3 280 29-313 77-511 (677)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.1 2.8E-08 9.5E-13 111.7 28.3 271 29-312 53-340 (376)
226 1mda_H Methylamine dehydrogena 99.1 1.4E-09 4.9E-14 122.1 16.5 252 22-288 69-366 (368)
227 2ece_A 462AA long hypothetical 99.0 2.7E-08 9.3E-13 112.7 25.9 231 25-256 89-399 (462)
228 2hz6_A Endoplasmic reticulum t 99.0 2.4E-12 8.3E-17 145.5 -9.1 256 28-309 8-279 (369)
229 1yiq_A Quinohemoprotein alcoho 99.0 1.8E-08 6E-13 123.2 24.3 266 29-298 121-538 (689)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.0 6.7E-08 2.3E-12 108.5 26.4 258 28-306 102-375 (376)
231 1kb0_A Quinohemoprotein alcoho 99.0 3.2E-08 1.1E-12 120.6 25.2 263 28-295 127-536 (677)
232 2ece_A 462AA long hypothetical 99.0 2E-07 6.7E-12 105.7 29.2 221 71-297 93-399 (462)
233 1npe_A Nidogen, entactin; glyc 98.9 8.2E-07 2.8E-11 94.7 31.0 251 29-291 1-263 (267)
234 2qe8_A Uncharacterized protein 98.9 3.7E-08 1.3E-12 109.6 20.3 224 62-307 17-276 (343)
235 2hz6_A Endoplasmic reticulum t 98.9 1.6E-10 5.6E-15 130.4 0.7 195 72-283 8-207 (369)
236 3hxj_A Pyrrolo-quinoline quino 98.9 5.5E-08 1.9E-12 106.4 20.5 264 18-309 60-324 (330)
237 1fwx_A Nitrous oxide reductase 98.8 4.2E-07 1.4E-11 106.4 25.8 216 72-298 100-407 (595)
238 3hxj_A Pyrrolo-quinoline quino 98.8 5.4E-08 1.8E-12 106.5 16.1 258 22-307 24-282 (330)
239 1npe_A Nidogen, entactin; glyc 98.8 3.9E-06 1.3E-10 89.3 30.2 220 19-250 37-263 (267)
240 1fwx_A Nitrous oxide reductase 98.8 8.2E-08 2.8E-12 112.3 17.7 219 27-257 99-407 (595)
241 1kv9_A Type II quinohemoprotei 98.8 5.9E-07 2E-11 109.3 25.4 279 29-313 66-492 (668)
242 4a2l_A BT_4663, two-component 98.7 2.7E-05 9.3E-10 96.6 38.7 280 20-309 175-480 (795)
243 2iwa_A Glutamine cyclotransfer 98.7 3.6E-06 1.2E-10 89.7 25.5 192 106-309 23-237 (266)
244 2fp8_A Strictosidine synthase; 98.7 5.7E-06 1.9E-10 90.8 27.3 233 63-308 20-312 (322)
245 1w6s_A Methanol dehydrogenase 98.6 2.3E-06 7.8E-11 102.3 24.0 281 29-313 62-507 (599)
246 4a2l_A BT_4663, two-component 98.6 0.00011 3.7E-09 91.2 39.0 276 17-307 356-657 (795)
247 2fp8_A Strictosidine synthase; 98.6 1E-05 3.4E-10 88.8 26.5 238 19-269 20-314 (322)
248 2ad6_A Methanol dehydrogenase 98.6 4.7E-06 1.6E-10 99.4 25.4 279 29-313 62-498 (571)
249 2iwa_A Glutamine cyclotransfer 98.6 7.6E-06 2.6E-10 87.2 24.3 203 18-226 21-238 (266)
250 2p4o_A Hypothetical protein; p 98.6 2E-05 6.9E-10 85.8 28.5 232 62-300 32-279 (306)
251 1kv9_A Type II quinohemoprotei 98.6 4.1E-06 1.4E-10 101.8 24.6 264 29-297 117-520 (668)
252 1flg_A Protein (quinoprotein e 98.5 1.5E-05 5.1E-10 95.1 28.2 280 29-313 68-520 (582)
253 3nol_A Glutamine cyclotransfer 98.5 5.3E-06 1.8E-10 87.5 21.1 179 106-298 45-244 (262)
254 2ad6_A Methanol dehydrogenase 98.5 5.3E-06 1.8E-10 98.9 23.1 259 29-293 115-521 (571)
255 3nol_A Glutamine cyclotransfer 98.5 7.2E-06 2.5E-10 86.5 20.6 186 64-257 45-244 (262)
256 3nok_A Glutaminyl cyclase; bet 98.4 8.3E-06 2.8E-10 86.1 19.2 183 64-256 57-253 (268)
257 2xe4_A Oligopeptidase B; hydro 98.4 1.3E-05 4.4E-10 98.9 24.1 155 19-176 175-354 (751)
258 2p4o_A Hypothetical protein; p 98.4 7.4E-05 2.5E-09 81.2 26.9 226 18-259 32-279 (306)
259 1w6s_A Methanol dehydrogenase 98.4 4.4E-05 1.5E-09 91.1 26.9 260 32-297 124-535 (599)
260 3nok_A Glutaminyl cyclase; bet 98.4 1.5E-05 5.1E-10 84.1 19.8 178 106-297 57-253 (268)
261 1flg_A Protein (quinoprotein e 98.4 2.1E-05 7.2E-10 93.9 23.4 265 29-297 117-548 (582)
262 1k3i_A Galactose oxidase precu 98.4 1.6E-05 5.6E-10 96.4 22.5 277 22-298 190-530 (656)
263 3mbr_X Glutamine cyclotransfer 98.4 5.5E-05 1.9E-09 79.1 23.2 185 63-256 22-222 (243)
264 3mbr_X Glutamine cyclotransfer 98.3 5.1E-05 1.7E-09 79.4 22.6 180 105-298 22-223 (243)
265 3v9f_A Two-component system se 98.3 0.00046 1.6E-08 85.3 34.7 279 17-309 257-568 (781)
266 3v9f_A Two-component system se 98.3 0.00079 2.7E-08 83.1 36.6 276 18-307 211-522 (781)
267 2xbg_A YCF48-like protein; pho 98.3 0.0021 7.2E-08 70.6 35.5 271 17-307 35-320 (327)
268 3qqz_A Putative uncharacterize 98.3 0.00037 1.3E-08 73.7 27.5 206 98-306 21-250 (255)
269 3tc9_A Hypothetical hydrolase; 98.3 0.00013 4.5E-09 83.6 25.7 235 63-307 138-428 (430)
270 3qqz_A Putative uncharacterize 98.3 0.00018 6.2E-09 76.0 24.7 204 17-224 26-252 (255)
271 2xe4_A Oligopeptidase B; hydro 98.2 6.3E-05 2.1E-09 92.7 23.9 194 63-266 175-398 (751)
272 1ijq_A LDL receptor, low-densi 98.2 0.0031 1.1E-07 68.8 33.4 232 31-274 3-244 (316)
273 3v64_C Agrin; beta propeller, 98.2 0.0015 5.1E-08 72.5 31.1 241 20-274 36-281 (349)
274 4hw6_A Hypothetical protein, I 98.1 0.0004 1.4E-08 79.6 26.5 236 63-307 140-431 (433)
275 3v65_B Low-density lipoprotein 98.1 0.00089 3E-08 75.5 28.9 239 22-274 81-324 (386)
276 3tc9_A Hypothetical hydrolase; 98.1 0.00051 1.8E-08 78.6 25.3 244 18-267 137-429 (430)
277 3p5b_L Low density lipoprotein 98.0 0.0057 1.9E-07 69.2 33.3 233 30-274 84-326 (400)
278 1ijq_A LDL receptor, low-densi 98.0 0.0031 1.1E-07 68.8 29.5 209 18-233 30-246 (316)
279 3sov_A LRP-6, low-density lipo 98.0 0.0022 7.7E-08 70.1 27.9 233 31-274 6-244 (318)
280 4hw6_A Hypothetical protein, I 98.0 0.00092 3.2E-08 76.6 25.8 243 18-267 139-432 (433)
281 3v64_C Agrin; beta propeller, 98.0 0.0021 7.1E-08 71.4 26.9 207 18-233 73-283 (349)
282 3kya_A Putative phosphatase; s 97.9 0.0017 5.8E-08 75.1 26.4 252 18-273 139-480 (496)
283 3p5b_L Low density lipoprotein 97.9 0.0054 1.8E-07 69.4 30.4 212 17-234 111-329 (400)
284 1k3i_A Galactose oxidase precu 97.9 0.00022 7.7E-09 86.3 19.2 241 66-311 190-499 (656)
285 3v65_B Low-density lipoprotein 97.9 0.002 6.9E-08 72.5 25.6 207 18-233 116-326 (386)
286 3sov_A LRP-6, low-density lipo 97.9 0.0044 1.5E-07 67.8 27.0 207 19-233 36-246 (318)
287 3kya_A Putative phosphatase; s 97.8 0.011 3.8E-07 68.2 29.0 239 63-308 140-474 (496)
288 3s94_A LRP-6, low-density lipo 97.7 0.04 1.4E-06 65.9 34.9 204 17-228 39-246 (619)
289 3amr_A 3-phytase; beta-propell 97.7 0.0063 2.1E-07 66.8 24.7 191 72-274 39-270 (355)
290 2xzh_A Clathrin heavy chain 1; 97.7 0.094 3.2E-06 56.6 32.5 253 39-309 48-332 (365)
291 3amr_A 3-phytase; beta-propell 97.7 0.0066 2.3E-07 66.6 24.3 190 114-308 39-262 (355)
292 2xbg_A YCF48-like protein; pho 97.6 0.02 7E-07 62.5 27.6 232 18-266 80-320 (327)
293 2ism_A Putative oxidoreductase 97.6 0.013 4.6E-07 64.9 25.9 228 62-296 31-332 (352)
294 2p9w_A MAL S 1 allergenic prot 97.6 0.0071 2.4E-07 65.8 22.5 204 22-228 17-268 (334)
295 2p9w_A MAL S 1 allergenic prot 97.6 0.012 4.1E-07 64.0 24.1 203 64-268 15-265 (334)
296 3s94_A LRP-6, low-density lipo 97.5 0.068 2.3E-06 63.9 32.5 159 18-178 84-245 (619)
297 3m0c_C LDL receptor, low-densi 97.5 0.027 9.1E-07 69.2 29.2 210 17-233 423-640 (791)
298 3m0c_C LDL receptor, low-densi 97.5 0.054 1.8E-06 66.5 31.7 232 31-274 397-638 (791)
299 1bpo_A Protein (clathrin); cla 97.5 0.17 5.7E-06 56.8 32.0 254 38-309 46-331 (494)
300 4a0p_A LRP6, LRP-6, low-densit 97.4 0.13 4.3E-06 61.6 33.3 230 30-272 7-241 (628)
301 3ott_A Two-component system se 97.4 0.27 9.3E-06 60.1 36.9 271 17-305 21-303 (758)
302 3ei3_A DNA damage-binding prot 97.4 0.19 6.4E-06 64.4 36.3 281 17-309 553-913 (1158)
303 3a9g_A Putative uncharacterize 97.4 0.038 1.3E-06 61.2 26.0 235 18-256 29-330 (354)
304 2xzh_A Clathrin heavy chain 1; 97.4 0.12 4E-06 55.9 27.8 242 23-273 72-337 (365)
305 3a9g_A Putative uncharacterize 97.3 0.094 3.2E-06 58.0 28.4 232 62-297 29-330 (354)
306 2ism_A Putative oxidoreductase 97.3 0.021 7.3E-07 63.2 22.8 232 18-256 31-333 (352)
307 1n7d_A LDL receptor, low-densi 97.3 0.00058 2E-08 83.2 10.1 211 18-234 406-623 (699)
308 1n7d_A LDL receptor, low-densi 97.2 0.0014 4.7E-08 79.9 13.1 229 38-276 384-622 (699)
309 1bpo_A Protein (clathrin); cla 97.2 0.22 7.5E-06 55.8 29.2 241 23-272 71-335 (494)
310 2g8s_A Glucose/sorbosone dehyd 97.2 0.047 1.6E-06 60.4 23.9 241 18-261 18-347 (353)
311 3s25_A Hypothetical 7-bladed b 97.2 0.098 3.3E-06 56.5 25.6 237 25-298 21-281 (302)
312 2g8s_A Glucose/sorbosone dehyd 97.1 0.13 4.6E-06 56.7 26.3 236 62-302 18-347 (353)
313 4a0p_A LRP6, LRP-6, low-densit 97.0 0.17 5.7E-06 60.6 28.1 205 18-233 37-245 (628)
314 2vpj_A Kelch-like protein 12; 97.0 0.034 1.2E-06 59.5 20.1 229 28-272 14-282 (301)
315 3das_A Putative oxidoreductase 96.9 0.32 1.1E-05 53.4 27.1 235 17-256 31-326 (347)
316 2vpj_A Kelch-like protein 12; 96.9 0.074 2.5E-06 56.8 21.5 224 72-309 14-278 (301)
317 3sre_A PON1, serum paraoxonase 96.9 0.049 1.7E-06 60.3 19.9 197 20-224 52-297 (355)
318 3ii7_A Kelch-like protein 7; p 96.8 0.14 4.6E-06 54.9 22.8 218 39-272 23-276 (306)
319 2xn4_A Kelch-like protein 2; s 96.8 0.071 2.4E-06 57.0 20.4 187 72-272 61-280 (302)
320 2xn4_A Kelch-like protein 2; s 96.7 0.19 6.3E-06 53.7 22.4 223 74-311 17-278 (302)
321 4asc_A Kelch repeat and BTB do 96.6 0.14 4.9E-06 55.1 21.6 226 31-272 6-281 (315)
322 3ii7_A Kelch-like protein 7; p 96.6 0.24 8.1E-06 52.9 23.1 223 74-311 13-274 (306)
323 3sre_A PON1, serum paraoxonase 96.6 0.28 9.4E-06 54.2 23.6 188 105-299 51-287 (355)
324 3pbp_A Nucleoporin NUP82; beta 96.5 0.13 4.6E-06 57.5 19.9 141 110-254 27-196 (452)
325 2uvk_A YJHT; unknown function, 96.4 0.12 4.1E-06 56.7 19.7 236 28-274 19-348 (357)
326 3ei3_A DNA damage-binding prot 96.4 4 0.00014 52.2 37.0 272 25-309 282-591 (1158)
327 1cru_A Protein (soluble quinop 96.3 1.3 4.3E-05 50.7 27.8 105 18-123 27-163 (454)
328 1zgk_A Kelch-like ECH-associat 96.3 0.15 5.2E-06 54.7 19.2 230 27-272 23-291 (308)
329 3ott_A Two-component system se 96.3 3.1 0.00011 50.6 36.6 276 18-308 146-447 (758)
330 3s25_A Hypothetical 7-bladed b 96.3 0.39 1.3E-05 51.8 22.0 198 70-298 22-242 (302)
331 3pbp_A Nucleoporin NUP82; beta 96.2 0.15 5.3E-06 57.0 18.3 152 69-222 28-209 (452)
332 1zgk_A Kelch-like ECH-associat 96.1 0.4 1.4E-05 51.3 21.2 223 72-309 24-287 (308)
333 2woz_A Kelch repeat and BTB do 96.0 0.5 1.7E-05 50.8 21.6 218 41-272 25-291 (318)
334 4asc_A Kelch repeat and BTB do 96.0 1.2 3.9E-05 47.8 24.2 209 75-299 7-253 (315)
335 2be1_A Serine/threonine-protei 96.0 0.3 1E-05 53.5 19.4 205 74-281 11-245 (339)
336 1xi4_A Clathrin heavy chain; a 95.9 0.45 1.5E-05 60.7 22.4 257 38-309 46-331 (1630)
337 3das_A Putative oxidoreductase 95.8 0.42 1.4E-05 52.6 19.3 116 140-256 26-158 (347)
338 1cru_A Protein (soluble quinop 95.7 0.65 2.2E-05 53.1 21.5 111 145-256 26-162 (454)
339 3sbq_A Nitrous-oxide reductase 95.5 4.9 0.00017 46.4 27.1 223 72-297 141-453 (638)
340 3sbq_A Nitrous-oxide reductase 95.5 1.5 5.2E-05 50.5 22.7 223 76-308 73-407 (638)
341 1xi4_A Clathrin heavy chain; a 95.4 0.36 1.2E-05 61.7 19.0 241 25-273 73-336 (1630)
342 1tl2_A L10, protein (tachylect 95.3 0.1 3.5E-06 53.3 11.2 178 74-262 5-204 (236)
343 1tl2_A L10, protein (tachylect 95.3 0.2 6.8E-06 51.1 13.2 102 62-170 41-157 (236)
344 2woz_A Kelch repeat and BTB do 94.9 1.9 6.7E-05 46.0 21.1 179 84-274 25-237 (318)
345 2uvk_A YJHT; unknown function, 94.6 0.6 2E-05 51.0 16.5 218 72-300 19-327 (357)
346 2be1_A Serine/threonine-protei 94.4 1.1 3.7E-05 49.0 17.5 193 31-230 12-236 (339)
347 2zwa_A Leucine carboxyl methyl 94.3 1 3.4E-05 54.5 18.8 198 71-272 396-639 (695)
348 2zwa_A Leucine carboxyl methyl 92.9 2.4 8.3E-05 51.1 18.7 196 27-228 396-638 (695)
349 2wg3_C Hedgehog-interacting pr 92.7 17 0.00057 41.4 29.1 106 18-124 14-159 (463)
350 3qhy_B Beta-lactamase inhibito 92.2 6.1 0.00021 41.7 18.7 222 62-309 24-246 (282)
351 2wg3_C Hedgehog-interacting pr 91.6 22 0.00075 40.4 28.7 106 62-167 14-160 (463)
352 4hvt_A Ritya.17583.B, post-pro 90.2 13 0.00046 44.7 21.0 238 21-267 132-429 (711)
353 3no0_A DNA gyrase subunit A; D 87.4 31 0.001 36.2 21.0 163 7-176 14-196 (276)
354 3b7f_A Glycosyl hydrolase, BNR 87.1 39 0.0013 37.0 26.0 195 63-263 116-367 (394)
355 3qhy_B Beta-lactamase inhibito 84.3 43 0.0015 35.0 19.3 240 18-288 24-263 (282)
356 1sqj_A OXG-RCBH, oligoxylogluc 83.6 88 0.003 38.0 27.2 151 61-215 14-190 (789)
357 3l6v_A GYRA, DNA gyrase subuni 83.2 58 0.002 35.6 28.6 236 70-308 4-315 (370)
358 1suu_A DNA gyrase subunit A; t 73.7 97 0.0033 32.9 30.3 235 71-307 6-281 (312)
359 1wp5_A Topoisomerase IV; broke 72.9 1E+02 0.0036 32.9 26.7 235 71-308 3-276 (323)
360 3uc1_A DNA gyrase subunit A; D 70.5 1.2E+02 0.004 32.5 27.3 235 30-268 4-279 (327)
361 3kci_A Probable E3 ubiquitin-p 68.2 1.4E+02 0.0048 32.5 29.9 236 63-308 54-344 (389)
362 3q6k_A 43.2 kDa salivary prote 67.1 1.5E+02 0.0052 32.4 25.1 143 126-268 124-306 (381)
363 1zi0_A DNA gyrase subunit A; b 66.2 1.4E+02 0.0047 31.6 29.7 234 72-308 2-276 (307)
364 3b7f_A Glycosyl hydrolase, BNR 66.2 1.5E+02 0.0051 32.0 24.1 188 74-265 23-259 (394)
365 4hvt_A Ritya.17583.B, post-pro 64.4 2.4E+02 0.0081 33.7 22.5 218 64-293 131-410 (711)
366 4gq2_M Nucleoporin NUP120; bet 63.5 2.8E+02 0.0097 34.3 21.0 38 147-184 237-274 (950)
367 1suu_A DNA gyrase subunit A; t 62.1 1.6E+02 0.0056 31.1 30.4 195 27-225 6-231 (312)
368 3uc1_A DNA gyrase subunit A; D 61.5 1.7E+02 0.0059 31.2 28.4 232 74-308 4-278 (327)
369 1sqj_A OXG-RCBH, oligoxylogluc 57.2 3.2E+02 0.011 32.9 26.0 145 17-166 14-190 (789)
370 2cn3_A Xyloglucanase, beta-1,4 57.1 3.1E+02 0.011 32.7 22.4 103 19-124 24-153 (737)
371 4gq2_M Nucleoporin NUP120; bet 56.7 1E+02 0.0035 38.3 15.0 37 239-275 237-273 (950)
372 1wp5_A Topoisomerase IV; broke 55.2 2.2E+02 0.0074 30.3 27.8 238 27-268 3-277 (323)
373 3no0_A DNA gyrase subunit A; D 55.0 2E+02 0.0068 29.8 26.9 200 104-308 24-245 (276)
374 2cn3_A Xyloglucanase, beta-1,4 54.8 3.3E+02 0.011 32.4 26.7 102 63-165 24-152 (737)
375 4a9v_A PHOX; hydrolase, beta-p 51.2 2.6E+02 0.0088 32.5 15.8 62 195-256 476-549 (592)
376 1zi0_A DNA gyrase subunit A; b 50.0 2.5E+02 0.0085 29.5 30.0 237 27-268 1-277 (307)
377 3mez_B Mannose-specific lectin 46.8 1.2E+02 0.0042 26.7 10.0 26 241-268 59-84 (113)
378 3kci_A Probable E3 ubiquitin-p 45.1 3.3E+02 0.011 29.4 25.8 230 30-268 63-345 (389)
379 3q6k_A 43.2 kDa salivary prote 45.0 3.4E+02 0.012 29.6 25.5 215 13-255 82-341 (381)
380 4d9s_A UVB-resistance protein 44.6 3.4E+02 0.012 29.5 29.8 273 18-307 16-355 (406)
381 3zwu_A Alkaline phosphatase PH 42.5 54 0.0018 38.4 8.6 59 197-255 478-548 (592)
382 4fhn_B Nucleoporin NUP120; pro 35.4 4E+02 0.014 33.6 15.9 38 147-184 239-276 (1139)
383 4fhn_B Nucleoporin NUP120; pro 34.4 3.5E+02 0.012 34.2 15.1 37 239-275 239-275 (1139)
384 3mkq_B Coatomer subunit alpha; 32.2 44 0.0015 32.5 4.7 46 743-788 11-56 (177)
385 3mvd_K Regulator of chromosome 31.5 5.3E+02 0.018 27.9 28.2 234 63-308 76-373 (423)
386 3f7f_A Nucleoporin NUP120; nuc 29.8 1.3E+02 0.0045 35.8 9.1 37 239-277 223-259 (729)
387 4d9s_A UVB-resistance protein 29.2 5.7E+02 0.02 27.6 26.8 233 62-308 16-304 (406)
388 3zwu_A Alkaline phosphatase PH 28.7 1E+02 0.0034 36.1 7.8 58 239-296 477-548 (592)
389 3l6v_A GYRA, DNA gyrase subuni 28.5 5.9E+02 0.02 27.5 33.1 149 25-176 3-180 (370)
390 3a0f_A Xyloglucanase; beta-pro 27.6 8.4E+02 0.029 29.0 27.1 154 60-216 19-203 (763)
391 1ov9_A VICH protein; dimer, he 26.6 11 0.00038 28.6 -0.5 44 760-803 4-47 (50)
392 4a9v_A PHOX; hydrolase, beta-p 24.4 1.7E+02 0.0059 33.9 8.5 59 238-296 476-548 (592)
393 1a12_A RCC1, regulator of chro 21.3 7.8E+02 0.027 26.4 29.1 233 62-308 59-364 (413)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-40 Score=379.89 Aligned_cols=283 Identities=20% Similarity=0.348 Sum_probs=264.6
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|++++|+|++.+|++++ .|++|+|||+.++ .....+.+|...|++++|+|++.+|++|+.|++|++||+.+++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s-~Dg~i~vwd~~~~-~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSAS-EDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEE-SSSCEEEEETTTC-CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred ccCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCC-cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 7889999999999999999987 9999999999876 4567889999999999999999999999999999999999999
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl 174 (945)
.+..+.+|...|.+++|+|++.+|++|+.|+.|++||+.++..+..+.+|...|.++.|+|++.+|++++.||.|++||+
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCC--------------------CCEEEEEeCCCeEEEEECCCCcEEEeecC
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPD--------------------GETLAVPGLKNDVVMYDRDTAEKLFSLRG 234 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd--------------------g~~La~gs~dg~I~vwD~~t~~~~~~~~~ 234 (945)
.++.....+. .|...+.+++|+|+ |.+|++|+.|+.|++||+.++.++..+.+
T Consensus 264 ~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 264 ATKECKAELR-------EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp TTCCEEEEEC-------CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCceeeEec-------CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 9988777664 35577999999996 67999999999999999999999998887
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 235 ~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
|...|.+++|+|+|++|++|+.||.|+|||+.+++.+.. ..|...|++++|+|++.+|++|+.||.|++|+.
T Consensus 337 -h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 337 -HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp -CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred -CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999999999999999999999999999998887766 468889999999999999999999999999985
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=363.00 Aligned_cols=285 Identities=20% Similarity=0.348 Sum_probs=260.6
Q ss_pred CCCCCEEEEEECCC----CCEEEEEEcCCCeEEEEcCCCCc-cccccccccccceEEEEEecCCCEEEEEEcCCcEEEEE
Q 002266 15 GNAASFCSILWDQQ----AHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 15 gh~~~V~svafspd----g~~L~t~g~~dg~V~IWd~~~~~-~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd 89 (945)
+|.+.|++++|+|+ +.+|++++ .|++|+||++.... .....+.+|...|.+++|++++.++++++.|++|++||
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs-~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGS-LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEc-CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 67799999999985 56788876 99999999986543 23346789999999999999999999999999999999
Q ss_pred cCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 002266 90 FPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169 (945)
Q Consensus 90 l~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I 169 (945)
+.+++.+..+..+...+.+++|+|++++|++|+.++.|++|++.++.....+..|...|.+++|+|++++|++++.||.|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i 188 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 188 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeE
Confidence 99999998888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCC
Q 002266 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg 249 (945)
++||+++++.+..+. .+...|.+++|+|++++|++++.|+.|++||+++++.+..+.+ |...|.+++|+|+|
T Consensus 189 ~iwd~~~~~~~~~~~-------~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 189 NIFDIATGKLLHTLE-------GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDD 260 (321)
T ss_dssp EEEETTTTEEEEEEC-------CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTS
T ss_pred EEEECCCCcEEEEEc-------ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEEEEECCCC
Confidence 999999998887765 3456789999999999999999999999999999998888887 99999999999999
Q ss_pred CEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 250 KYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 250 ~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.+|++++.|+.|+|||+.++..+.. ..|...|++++|+|+++.|++++.||.|++||..
T Consensus 261 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999988877 5688899999999999999999999999999964
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8.7e-39 Score=358.22 Aligned_cols=286 Identities=18% Similarity=0.330 Sum_probs=257.2
Q ss_pred cccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEE
Q 002266 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 10 ~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd 89 (945)
.... +|.+.|++++|+|++++|++++ .||.|+|||..+. .....+..|...|.+++|+|++++|++|+.|+.|++|+
T Consensus 49 ~~l~-gH~~~v~~~~~s~d~~~l~s~s-~Dg~v~iWd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 49 RTLR-GHLAKIYAMHWGTDSRLLLSAS-QDGKLIIWDSYTT-NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp EEEC-CCSSCEEEEEECTTSSEEEEEE-TTTEEEEEETTTC-CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred eeec-CCCCceEEEEECCCCCEEEEEe-CCCcEEEEECCCC-CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3344 7889999999999999999987 9999999998876 44566788999999999999999999999999999999
Q ss_pred cCCC----eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC
Q 002266 90 FPGG----EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165 (945)
Q Consensus 90 l~~g----~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~ 165 (945)
+.++ .....+.+|...|.++.|++++. +++++.|+.|++||+.++..+..+.+|...|.+++|+|++.+|++++.
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 9765 34556778999999999998864 899999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC-CCCCCeEEEE
Q 002266 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG-DHVQPICFLS 244 (945)
Q Consensus 166 Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~-~h~~~I~~l~ 244 (945)
||.|++||++++..+..+. .|...|++++|+|++++|++++.|+.|++||+++++.+..+.. .+...|++++
T Consensus 205 d~~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 277 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFT-------GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277 (340)
T ss_dssp TSCEEEEETTTCSEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred CCcEEEEECCCCeeEEEEc-------CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEE
Confidence 9999999999998777665 3557899999999999999999999999999999888776653 2345799999
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEe
Q 002266 245 WSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWE 306 (945)
Q Consensus 245 fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd 306 (945)
|+|+|++|++|+.||.|+|||+.++..+.. ..|...|++++|+|++.+|++|+.||.|++|+
T Consensus 278 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999988877665 56889999999999999999999999999996
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.7e-38 Score=350.02 Aligned_cols=294 Identities=19% Similarity=0.235 Sum_probs=258.3
Q ss_pred CCccccccccccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE
Q 002266 1 MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80 (945)
Q Consensus 1 Mk~~~i~~~~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs 80 (945)
|+.+..+....|. +.|++++|+|+|++|++++ .||.|+|||+.++ .....+..|..+|.+++|+|++++|++|+
T Consensus 1 ~~l~~~~~~~~h~----~~V~~~~fsp~~~~l~s~~-~dg~v~lWd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 1 MKLDIKKTFSNRS----DRVKGIDFHPTEPWVLTTL-YSGRVELWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp -CCCCEEEEEEEC----SCEEEEEECSSSSEEEEEE-TTSEEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred CcceeEEeecCCC----CceEEEEECCCCCEEEEEc-CCCcEEEEECCCC-ceeEEeeccCCcEEEEEEeCCCCEEEEEC
Confidence 5666666665555 8999999999999999987 9999999999876 45667888999999999999999999999
Q ss_pred cCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC-eEEEEEecCCCCEEEEEEcc-CCC
Q 002266 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG-SIARVLKGHKGPVTGLAFDP-NSE 158 (945)
Q Consensus 81 ~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~-~~~~~l~~h~~~V~~lafsp-dg~ 158 (945)
.|+.|++||+.+++.+..+..|...|.+++|+|++.+|++|+.|+.|++||++++ .....+.+|...|.+++|+| ++.
T Consensus 75 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 9999999999999999999999999999999999999999999999999999887 55677889999999999999 678
Q ss_pred EEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEeecCCC
Q 002266 159 YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP--DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp--dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h 236 (945)
+|++++.||.|++||++++.....+.. .+...+..++|+| ++.+|++++.|+.|++||+++++++..+.+ |
T Consensus 155 ~l~sgs~D~~v~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-h 227 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTT------GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-H 227 (304)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEEC------CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC-C
T ss_pred EEEEEeCCCeEEEEECCCCCccceecc------CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC-C
Confidence 999999999999999988765554432 3345688899987 788999999999999999999999999987 9
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cCCCCeeEEEEecCCC--EEEEEEcCCeEEEEecC
Q 002266 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KFDDRICCMAWKPIGN--ALAVIDVMGKYGVWESV 308 (945)
Q Consensus 237 ~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~V~~la~spdg~--~Las~s~DG~I~iWd~~ 308 (945)
...|.+++|+|++.+|++|+.||.|+|||+.+++.+... .+...+.+++|+|++. +|++|+.+| +.+|++.
T Consensus 228 ~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 999999999999999999999999999999999888774 4567899999999885 467666555 7777664
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=358.55 Aligned_cols=287 Identities=15% Similarity=0.176 Sum_probs=242.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCC-------Cc---cccccccccccceEEEEEecCCCEEEEEEcCCc
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLL-------PS---NLPKILRHHRDGVTALALSPNSTCLASGSIDHS 84 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~-------~~---~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~ 84 (945)
.|...|.+++|+|||++|++++ |+++++||... .. ........|...|.+++|+|++ .|++|+.||+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s--d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS--SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE--CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred cccCCEEEEEECCCCCEEEEEe--CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 4557799999999999888765 66777776311 00 1111223456789999999985 7889999999
Q ss_pred EEEEEcCCCeeeee----cccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCC-E
Q 002266 85 VKLYKFPGGEFQTN----ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE-Y 159 (945)
Q Consensus 85 V~iwdl~~g~~~~~----l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~-~ 159 (945)
|+|||+.+++.... +.+|...|++++|+|+|++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++. +
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 99999998865433 347899999999999999999999999999999999999999999999999999999885 7
Q ss_pred EEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCC
Q 002266 160 LASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238 (945)
Q Consensus 160 Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~ 238 (945)
|++++.||+|++||+++++....+... .+...+.+++|+| ++++|++|+.|+.|++||+++++.+..+.+ |..
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~-h~~ 258 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCS-----APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV-HSQ 258 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC-CSS
T ss_pred eeeeccccccccccccccceeeeeecc-----eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC-CCC
Confidence 899999999999999999877766432 2345688999999 567899999999999999999999999887 999
Q ss_pred CeEEEEEcCCC-CEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCC-EEEEEEcCCeEEEEecCCC
Q 002266 239 PICFLSWSPNG-KYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN-ALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 239 ~I~~l~fSpdg-~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~-~Las~s~DG~I~iWd~~~~ 310 (945)
.|++++|+|+| ++||+|+.|+.|+|||+.+++++....|...|++++|+|+++ +|++++.||+|++|++...
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 99999999998 589999999999999999999988889999999999999986 6778999999999998653
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-38 Score=359.89 Aligned_cols=289 Identities=15% Similarity=0.184 Sum_probs=243.4
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcC------CCeEEEEcCCCCccc---cccccccccceEEEEEecCCCEEEEEEcCCcE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSS------ETTISIHDPLLPSNL---PKILRHHRDGVTALALSPNSTCLASGSIDHSV 85 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~------dg~V~IWd~~~~~~~---~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V 85 (945)
.|...|++|+|||||++|++++ . |+.|++|+..++... ......|...|++++|+|++. +++++.||+|
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s-~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAAS-SLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEE-CSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred cccCCEEEEEECCCCCEEEEEc-CCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 5778999999999999999987 4 788999997665322 223456888999999999975 5567889999
Q ss_pred EEEEcCCCeeeee----cccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCC-EE
Q 002266 86 KLYKFPGGEFQTN----ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE-YL 160 (945)
Q Consensus 86 ~iwdl~~g~~~~~----l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~-~L 160 (945)
+|||+.+++.... ...|...|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++. ++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 9999988765432 346889999999999999999999999999999999999999999999999999999875 78
Q ss_pred EEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCC
Q 002266 161 ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD-GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP 239 (945)
Q Consensus 161 as~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd-g~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~ 239 (945)
++++.||.|++||+++++....+.. ..+...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+.+ |...
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~~~~-----~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~~ 271 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATRIDF-----CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV-HSQN 271 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCBCCC-----TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC-CSSC
T ss_pred eeeccCCceEEEECCCCceeeeeee-----ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec-ccee
Confidence 9999999999999998876654432 234567899999996 57899999999999999999999888887 8899
Q ss_pred eEEEEEcCCC-CEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEec-CCCEEEEEEcCCeEEEEecCCCC
Q 002266 240 ICFLSWSPNG-KYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKP-IGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 240 I~~l~fSpdg-~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~sp-dg~~Las~s~DG~I~iWd~~~~~ 311 (945)
|++++|+|++ ++||+|+.|+.|+|||+.+++++....|...|++++|+| ++.+|++++.||.|++|++....
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 9999999987 689999999999999999999998899999999999999 78999999999999999986443
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.4e-37 Score=350.89 Aligned_cols=283 Identities=18% Similarity=0.309 Sum_probs=253.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g- 93 (945)
+|...|++++|+|++++|++++ .|++|+|||..+. .....+..|...|.+++|+|+|.+|++|+.|+.+++|++...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s-~Dg~v~vWd~~~~-~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSS-QDGKVIVWDSFTT-NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTC-CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred CCCCeEEEEEECCCCCEEEEEe-CCCeEEEEECCCC-CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 7889999999999999999987 9999999998776 345567778899999999999999999999999999998643
Q ss_pred -----eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEcc--CCCEEEEEeCC
Q 002266 94 -----EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP--NSEYLASIDSI 166 (945)
Q Consensus 94 -----~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafsp--dg~~Las~s~D 166 (945)
.....+..|...|.+++|+|++..|++++.|++|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.|
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 23345667899999999999999999999999999999999999999999999999999988 56899999999
Q ss_pred CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC-CCCCCeEEEEE
Q 002266 167 GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG-DHVQPICFLSW 245 (945)
Q Consensus 167 g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~-~h~~~I~~l~f 245 (945)
|.|++||+++++.+..+. .|...|++++|+|++.+|++++.|+.|++||++....+..+.. .+...+.+++|
T Consensus 220 g~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFE-------THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp SCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred CeEEEEECCCCcEEEEec-------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 999999999998877764 4567899999999999999999999999999998887766643 23457899999
Q ss_pred cCCCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEe
Q 002266 246 SPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWE 306 (945)
Q Consensus 246 Spdg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd 306 (945)
+|+|++|++|+.|+.|+|||+.++..+.. ..|...|++++|+|+|++|++++.||.|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999988877665 57889999999999999999999999999995
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=350.17 Aligned_cols=290 Identities=22% Similarity=0.320 Sum_probs=246.3
Q ss_pred CCCC-CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccc--cccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC
Q 002266 15 GNAA-SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNL--PKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 15 gh~~-~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~--~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~ 91 (945)
+|.. .|.+++|+|+|++|++++ .|++|+|||+...... .....+|...|++++|+|++++|++|+.|+.|++|++.
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~-~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCG-GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEE-TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred CCCCCcEEEEEECCCCCEEEEEc-CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 5556 899999999999999987 9999999998765322 22346899999999999999999999999999999988
Q ss_pred CC--eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC---eEEEEEecCCCCEEEEEEccCCCEEEEEeCC
Q 002266 92 GG--EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG---SIARVLKGHKGPVTGLAFDPNSEYLASIDSI 166 (945)
Q Consensus 92 ~g--~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~---~~~~~l~~h~~~V~~lafspdg~~Las~s~D 166 (945)
.+ +....+.+|...|.+++|+|++++|++|+.|+.|++||+.++ ..+..+.+|...|.+++|+|++.+|++++.|
T Consensus 92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 76 356678889999999999999999999999999999999876 3456788999999999999999999999999
Q ss_pred CcEEEEEccCCeee--eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCC---------------CcEE
Q 002266 167 GTVIYWELQSGREL--HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT---------------AEKL 229 (945)
Q Consensus 167 g~I~iwDl~t~~~i--~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t---------------~~~~ 229 (945)
+.|++||+.++... ..+. .|...|.+++|+|+|++|++++.|+.|++|+... +.++
T Consensus 172 ~~i~~w~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 172 DTVKLYREEEDDWVCCATLE-------GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp SCEEEEEEETTEEEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred CcEEEEEecCCCEEEEEEec-------CCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 99999999887543 2332 4667899999999999999999999999999632 2344
Q ss_pred EeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCee--------e-ee-ccCCCCeeEEEEecCC-CEEEEEEc
Q 002266 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLD--------I-DR-QKFDDRICCMAWKPIG-NALAVIDV 298 (945)
Q Consensus 230 ~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~--------i-~~-~~~~~~V~~la~spdg-~~Las~s~ 298 (945)
..+.+.|...|.+++|+|++.+|++++.|+.|+||+...... . .. ..|...|++++|+|++ .+|++++.
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence 556666888999999999999999999999999999875421 1 11 3678899999999998 49999999
Q ss_pred CCeEEEEecCCCCC
Q 002266 299 MGKYGVWESVVPSS 312 (945)
Q Consensus 299 DG~I~iWd~~~~~~ 312 (945)
||.|++|++..+..
T Consensus 325 Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 325 DGEVAFWKYQRPEG 338 (345)
T ss_dssp TSCEEEEEECC---
T ss_pred CCcEEEEEecCCCC
Confidence 99999999976654
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.7e-37 Score=342.00 Aligned_cols=291 Identities=20% Similarity=0.300 Sum_probs=254.1
Q ss_pred cccccccccCCCCCEEEEEECCCC-CEEEEEEcCCCeEEEEcCCCCc----cccccccccccceEEEEEecCCCEEEEEE
Q 002266 6 VKLREAHKCGNAASFCSILWDQQA-HHLVTASSSETTISIHDPLLPS----NLPKILRHHRDGVTALALSPNSTCLASGS 80 (945)
Q Consensus 6 i~~~~aH~~gh~~~V~svafspdg-~~L~t~g~~dg~V~IWd~~~~~----~~~~~l~~h~~~V~~la~spdg~~Lasgs 80 (945)
+.++.... +|.+.|++++|+|++ ++|++++ .|++|++|++.... .....+.+|...|.+++|+|++.+|++|+
T Consensus 7 ~~l~~~l~-gH~~~V~~l~~~~~~~~~l~s~s-~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 7 LVLRGTLE-GHNGWVTSLATSAGQPNLLLSAS-RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEEC-CCSSCEEEEEECSSCTTEEEEEE-TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEEc-cccceEEEEEccCCCccEEEEec-CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 34444555 888999999999976 6777776 99999999975432 23456789999999999999999999999
Q ss_pred cCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccC----
Q 002266 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPN---- 156 (945)
Q Consensus 81 ~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspd---- 156 (945)
.|++|++||+.+++....+.+|...|.+++|+|++.+|++|+.|+.|++||++ +..+..+.+|...|.++.|+|.
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC----
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCC
Confidence 99999999999999999999999999999999999999999999999999995 5567788899999999999985
Q ss_pred --CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC
Q 002266 157 --SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234 (945)
Q Consensus 157 --g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~ 234 (945)
+.+|++++.|+.|++||+++.+....+. .|...|.+++|+|+|++|++++.|+.|++||+.+++.+..+..
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFI-------GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEEC-------CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeec-------CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 4489999999999999999988766654 4567899999999999999999999999999999998888864
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec---------cCCCCeeEEEEecCCCEEEEEEcCCeEEEE
Q 002266 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ---------KFDDRICCMAWKPIGNALAVIDVMGKYGVW 305 (945)
Q Consensus 235 ~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~---------~~~~~V~~la~spdg~~Las~s~DG~I~iW 305 (945)
...|.+++|+|++.+|++++. +.+++|++.....+... .+...+.+++|+|+|++|++|+.||.|++|
T Consensus 237 --~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 237 --QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp --CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred --CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEE
Confidence 468999999999999999885 45999999887665442 235678999999999999999999999999
Q ss_pred ecCC
Q 002266 306 ESVV 309 (945)
Q Consensus 306 d~~~ 309 (945)
++.+
T Consensus 314 d~~t 317 (319)
T 3frx_A 314 QVMT 317 (319)
T ss_dssp EEEE
T ss_pred EEee
Confidence 9864
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.1e-37 Score=338.20 Aligned_cols=284 Identities=22% Similarity=0.406 Sum_probs=255.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|++++|+|+|++|++++ .|+.|+||+..++ .....+.+|...|.+++|+|++++|++|+.|+.|++||+.+++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~-~dg~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDG-KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ccCCcEEEEEECCCCCEEEEee-CCCeEEEEeCCCc-ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 7889999999999999999987 9999999998776 4566788999999999999999999999999999999999999
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl 174 (945)
....+..|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|...|.+++|+|++.+|++++.||.|++||+
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeE--EEEEc-CCCCE
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC--FLSWS-PNGKY 251 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~--~l~fS-pdg~~ 251 (945)
++++.+..+.. .+...+..++|+|++++|++++.|+.|++||+.+++.+..+.+ |...+. ...|+ +++.+
T Consensus 179 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 179 ASGQCLKTLID------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG-HKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp TTCCEEEEECC------SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECS-SCCSSSCCCEEEECSSSCE
T ss_pred CCCceeeEEec------cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEe-cCCceEEEEEEEEeCCCcE
Confidence 99887766532 2345688999999999999999999999999999998888876 544322 23344 68899
Q ss_pred EEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEE--cCCeEEEEec
Q 002266 252 MATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVID--VMGKYGVWES 307 (945)
Q Consensus 252 Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s--~DG~I~iWd~ 307 (945)
|++|+.||.|++||+.+++.+.. ..|...|.+++|+|+++.|++++ .||.|++|+.
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 99999999999999999888776 46888999999999999999987 6999999985
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-37 Score=353.97 Aligned_cols=287 Identities=17% Similarity=0.315 Sum_probs=251.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
||.+.|++++|+|++++|++++ .|++|+|||..++ .....+..|...|.+++|+|+|++|++|+.|+.|++|++.+..
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s-~D~~v~iWd~~~~-~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSAS-QDGRLIVWNALTS-QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEE-TTSEEEEEETTTT-EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred ccccEEEEEEEcCCCCEEEEEe-CCCeEEEEECCCC-ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 7889999999999999999987 9999999998876 4566788899999999999999999999999999999986532
Q ss_pred -------eeeecccCCCCEEEEEEecC-CCEEEEEECCCcEEEEEcCCCeEEEEE-----ecCCCCEEEEEEcc-CCCEE
Q 002266 95 -------FQTNITRFTLPIRVLAFNKS-GSMLAAAGDDEGIKLINTIDGSIARVL-----KGHKGPVTGLAFDP-NSEYL 160 (945)
Q Consensus 95 -------~~~~l~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~iwd~~~~~~~~~l-----~~h~~~V~~lafsp-dg~~L 160 (945)
....+.+|...|.++.|+|+ +..|++|+.|+.|++||+.++..+..+ .+|...|.+++|++ ++.+|
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMF 221 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEE
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEE
Confidence 23456789999999999996 457999999999999999999988877 67899999999987 88999
Q ss_pred EEEeCCCcEEEEEccC-CeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC----
Q 002266 161 ASIDSIGTVIYWELQS-GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD---- 235 (945)
Q Consensus 161 as~s~Dg~I~iwDl~t-~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~---- 235 (945)
++++.||.|++||++. +..+..+. .|...|++++|+|+|++|++++.|+.|++||++++..+..+...
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTYH-------GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEEC-------CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred EEEECCCeEEEEECCCCCcceEEEC-------CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 9999999999999984 34444443 45678999999999999999999999999999999888776542
Q ss_pred --CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee-----ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 236 --HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-----QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 236 --h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~-----~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
+...|++++|+|+|++|++|+.||.|+|||+.+++.+.. ..|...|++++|+|+|++|++|+.||.|++|++.
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 123489999999999999999999999999988877654 3578899999999999999999999999999986
Q ss_pred CC
Q 002266 309 VP 310 (945)
Q Consensus 309 ~~ 310 (945)
..
T Consensus 375 ~~ 376 (380)
T 3iz6_a 375 GH 376 (380)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-36 Score=346.98 Aligned_cols=289 Identities=18% Similarity=0.263 Sum_probs=247.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccc------------------cceEEEEEecCCCEE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHR------------------DGVTALALSPNSTCL 76 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~------------------~~V~~la~spdg~~L 76 (945)
+|...|++++|+|+|++|++++ ++.++||++.++.. ...+..|. ..|++++|+|+|++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~--~~~v~i~~~~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC--NKTTQVYRVSDGSL-VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC--BSCEEEEETTTCCE-EEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc--CCcEEEEEecCCCE-EEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 5779999999999999999864 68999999877643 33333332 249999999999999
Q ss_pred EEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEcc-
Q 002266 77 ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP- 155 (945)
Q Consensus 77 asgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafsp- 155 (945)
++|+.|+.|++||+.+++....+.+|...|.+++|+|++.+|++++.|+.|++||++++.....+. +...+.+++|+|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999998877776 667899999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCC---------
Q 002266 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA--------- 226 (945)
Q Consensus 156 dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~--------- 226 (945)
++.+|++++.||.|++||++++..+..+.........|...|.+++|+|+|++|++++.|+.|++||+.+.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 89999999999999999999998777664433333467788999999999999999999999999999763
Q ss_pred ---cEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEec------CCCEEEEE
Q 002266 227 ---EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKP------IGNALAVI 296 (945)
Q Consensus 227 ---~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~sp------dg~~Las~ 296 (945)
.....+.+ |...|.+++|+|++.+|++|+.||.|+|||+.++..+.. ..|...|.+++|++ ++++|++|
T Consensus 298 ~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sg 376 (393)
T 1erj_A 298 NSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATG 376 (393)
T ss_dssp ---CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEE
T ss_pred CCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEE
Confidence 23445555 889999999999999999999999999999999887766 56888999999986 67899999
Q ss_pred EcCCeEEEEecC
Q 002266 297 DVMGKYGVWESV 308 (945)
Q Consensus 297 s~DG~I~iWd~~ 308 (945)
+.||.|++|+..
T Consensus 377 s~Dg~i~iW~~~ 388 (393)
T 1erj_A 377 SGDCKARIWKYK 388 (393)
T ss_dssp ETTSEEEEEEEE
T ss_pred CCCCcEEECccc
Confidence 999999999975
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-36 Score=334.87 Aligned_cols=287 Identities=18% Similarity=0.216 Sum_probs=233.2
Q ss_pred cccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-cccccc-cc-cccceEEEEEecCCCEEEEEEcCCcEE
Q 002266 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKIL-RH-HRDGVTALALSPNSTCLASGSIDHSVK 86 (945)
Q Consensus 10 ~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-~~~~~l-~~-h~~~V~~la~spdg~~Lasgs~Dg~V~ 86 (945)
.... +|...|.+++|+|+ +|++++ .|+.|+||++..+. .....+ .. |...|++++|+|++.+|++|+.|++|+
T Consensus 8 ~~~~-~h~~~v~~~~~s~~--~las~~-~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 8 KSLK-LYKEKIWSFDFSQG--ILATGS-TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEE-CCSSCEEEEEEETT--EEEEEE-SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeec-cCCCceeeeccCCC--EEEEEc-CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 3344 67799999999988 777776 99999999987642 223333 34 999999999999999999999999999
Q ss_pred EEEcCC-------CeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCC----CeEEEEEecCCCCEEEEEEcc
Q 002266 87 LYKFPG-------GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID----GSIARVLKGHKGPVTGLAFDP 155 (945)
Q Consensus 87 iwdl~~-------g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~----~~~~~~l~~h~~~V~~lafsp 155 (945)
+|++.. .+....+.+|...|.+++|+|++++|++|+.|+.|++||+.. .+.+..+.+|...|.+++|+|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 999843 345667888999999999999999999999999999999953 256778889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCC--eeeeeecccCCCCCCCCCCceEEEEcCC--CCEEEEEeCCCeEEEEECCCC-----
Q 002266 156 NSEYLASIDSIGTVIYWELQSG--RELHNLKRVAPDIGSDPSSMNVLSWSPD--GETLAVPGLKNDVVMYDRDTA----- 226 (945)
Q Consensus 156 dg~~Las~s~Dg~I~iwDl~t~--~~i~~~~~~~~~~~~~~~~i~~l~~spd--g~~La~gs~dg~I~vwD~~t~----- 226 (945)
++.+|++++.|++|++||+.++ ..+..+. .|...|.+++|+|+ +.+|++++.|+.|++||+..+
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLN-------GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEEC-------CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-------CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 9999999999999999999876 3444443 45678999999998 779999999999999998754
Q ss_pred ---cEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe--eeee--ccCCC-CeeEEEEec--CCCEEEEE
Q 002266 227 ---EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL--DIDR--QKFDD-RICCMAWKP--IGNALAVI 296 (945)
Q Consensus 227 ---~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~--~i~~--~~~~~-~V~~la~sp--dg~~Las~ 296 (945)
.....+...|...|.+++|++++ +|++++.||.|+|||..++. .+.. ..|.. .|.+++|+| ++++|+++
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~ 315 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATG 315 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEE
T ss_pred ceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEe
Confidence 34455555588999999999765 89999999999999998764 2322 35665 899999999 68899999
Q ss_pred EcCCeEEEEecC
Q 002266 297 DVMGKYGVWESV 308 (945)
Q Consensus 297 s~DG~I~iWd~~ 308 (945)
+.||.|++|++.
T Consensus 316 s~Dg~v~~W~~~ 327 (330)
T 2hes_X 316 GDDGIVNFWSLE 327 (330)
T ss_dssp ETTSEEEEEEC-
T ss_pred cCCCcEEEEEec
Confidence 999999999975
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7e-36 Score=334.81 Aligned_cols=285 Identities=20% Similarity=0.271 Sum_probs=240.0
Q ss_pred ccccCCCCCEEEEEE-----CC-CCCEEEEEEcCCCeEEEEcCCCCc------cccccccccccceEEEEEecCCCEEEE
Q 002266 11 AHKCGNAASFCSILW-----DQ-QAHHLVTASSSETTISIHDPLLPS------NLPKILRHHRDGVTALALSPNSTCLAS 78 (945)
Q Consensus 11 aH~~gh~~~V~svaf-----sp-dg~~L~t~g~~dg~V~IWd~~~~~------~~~~~l~~h~~~V~~la~spdg~~Las 78 (945)
... ||...|++++| ++ ++++|++++ .|++|+|||+.... .....+.+|...|.+++|+|++.+|++
T Consensus 16 ~l~-gH~~~V~~~~~~~s~~~~~d~~~l~sgs-~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 16 ILE-GHSDWVTSIVAGFSQKENEDSPVLISGS-RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEE-CCSSCEEEEEECCCSSTTCCCCEEEEEE-TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eec-cchhhhhheeeEEEeecCCCCCEEEEEc-CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 344 77799999999 77 899999987 99999999986532 234567889999999999999999999
Q ss_pred EEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEe---cCCCCEEEEEEcc
Q 002266 79 GSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLK---GHKGPVTGLAFDP 155 (945)
Q Consensus 79 gs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~---~h~~~V~~lafsp 155 (945)
|+.|++|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++||+.... ..... .|...|.+++|+|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeecc
Confidence 9999999999999999999999999999999999999999999999999999997433 33333 6889999999999
Q ss_pred CC----------CEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 002266 156 NS----------EYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225 (945)
Q Consensus 156 dg----------~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t 225 (945)
++ .+|++++.||.|++||. .......+. .|...|.+++|+|+|++|++++.|+.|++||+..
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-------~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-------AHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-------CCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-------CccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 87 79999999999999994 444444443 4567899999999999999999999999999954
Q ss_pred -CcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeee--ec------------cCCCCeeEEEEecCC
Q 002266 226 -AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDID--RQ------------KFDDRICCMAWKPIG 290 (945)
Q Consensus 226 -~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~--~~------------~~~~~V~~la~spdg 290 (945)
......+. +...|.+++|+|++.++++++ |+.|+|||+.++.... .. .|...|.+++|+|+|
T Consensus 245 ~~~~~~~~~--~~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 321 (343)
T 2xzm_R 245 LTYPQREFD--AGSTINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALG 321 (343)
T ss_dssp CSSCSEEEE--CSSCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSS
T ss_pred Ccccceeec--CCCcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCC
Confidence 33444443 345799999999999887665 7889999998765433 11 466789999999999
Q ss_pred CEEEEEEcCCeEEEEecCC
Q 002266 291 NALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 291 ~~Las~s~DG~I~iWd~~~ 309 (945)
++|++|+.||.|++|++..
T Consensus 322 ~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 322 KKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CCEEEEETTSEEEEEEEEE
T ss_pred CeEEEecCCceEEEEEEEc
Confidence 9999999999999999754
No 15
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.1e-35 Score=326.04 Aligned_cols=282 Identities=17% Similarity=0.257 Sum_probs=254.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccc--cc--ccccceEEEEEecCCCEEEEEEcCCcEEEEEc
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKI--LR--HHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~--l~--~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl 90 (945)
+|...|++++|+|++++|++++ ||.|++|++.+....... +. .|...|.+++|+|++++|++++.||.|++|++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred cCCCceEEEEEecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 6779999999999999999875 899999998776432222 22 68899999999999999999999999999999
Q ss_pred CCCe--eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCc
Q 002266 91 PGGE--FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168 (945)
Q Consensus 91 ~~g~--~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~ 168 (945)
.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+.+++....+..|...|.+++|+|++++|++++.||.
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 206 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCc
Confidence 8876 55667788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCC
Q 002266 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248 (945)
Q Consensus 169 I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpd 248 (945)
|++||+++++.+..+. +...+.+++|+|++++|++++.++.|++||+.+++.. .+.. |...|.+++|+|+
T Consensus 207 i~~~d~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 207 VRSWDLREGRQLQQHD--------FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHL-HESCVLSLKFAYC 276 (337)
T ss_dssp EEEEETTTTEEEEEEE--------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECC-CSSCEEEEEECTT
T ss_pred EEEEECCCCceEeeec--------CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcC-CccceeEEEECCC
Confidence 9999999998777653 2456899999999999999999999999999988754 4444 8899999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 249 GKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 249 g~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
+++|++++.||.|++||+.+++.+....+...|.+++|+|++++|++++.||.|++|++.
T Consensus 277 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 277 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 999999999999999999999988888888999999999999999999999999999974
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.3e-36 Score=362.32 Aligned_cols=293 Identities=20% Similarity=0.304 Sum_probs=247.5
Q ss_pred CCCCCEEEEEECCCCCE-EEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC
Q 002266 15 GNAASFCSILWDQQAHH-LVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~-L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g 93 (945)
+|...|++++|+|++.+ |++++ .|++|++||.... .....+.+|...|++++|+|+|++|++|+.|++|++|++.++
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s-~D~~v~lwd~~~~-~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGS-DDNTVAIFEGPPF-KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEE-TTSCEEEEETTTB-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCCceEEEECCCCCeEEEEEe-CCCeEEEEECCCC-eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 67799999999999985 66665 9999999997665 456678899999999999999999999999999999999999
Q ss_pred eeeeecc-------cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEE---------------------------
Q 002266 94 EFQTNIT-------RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIAR--------------------------- 139 (945)
Q Consensus 94 ~~~~~l~-------~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~--------------------------- 139 (945)
+....+. .|...|.+++|+|++++|++++.|++|++||+.+++.+.
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~ 302 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 302 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEET
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeC
Confidence 8877773 689999999999999999999999999999998776543
Q ss_pred ----------------EEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecc-cC---------------
Q 002266 140 ----------------VLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR-VA--------------- 187 (945)
Q Consensus 140 ----------------~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~-~~--------------- 187 (945)
.+.+|...|.+++|+|++++|++++.||+|++||+.++.....+.. +.
T Consensus 303 d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~ 382 (611)
T 1nr0_A 303 NGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 382 (611)
T ss_dssp TCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEE
T ss_pred CCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEE
Confidence 3457899999999999999999999999999999987654332200 00
Q ss_pred --------------------------------------CCC---------------------CCCCCCceEEEEcCCCCE
Q 002266 188 --------------------------------------PDI---------------------GSDPSSMNVLSWSPDGET 208 (945)
Q Consensus 188 --------------------------------------~~~---------------------~~~~~~i~~l~~spdg~~ 208 (945)
+.. ..+...+.+++|+|+|++
T Consensus 383 s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~ 462 (611)
T 1nr0_A 383 TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQF 462 (611)
T ss_dssp EEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCE
T ss_pred EEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCE
Confidence 000 001234678999999999
Q ss_pred EEEEeCCCeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC-Ceeeee--cc-CCCCee
Q 002266 209 LAVPGLKNDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDR--QK-FDDRIC 282 (945)
Q Consensus 209 La~gs~dg~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~-~~~i~~--~~-~~~~V~ 282 (945)
|++|+.|+.|++||+.++.. +.. . .|...|++++|+|+|++|++++.|+.|++|++.+ ++.+.. .. |...|.
T Consensus 463 lasgs~D~~v~lwd~~~~~~~~~~~-~-~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~ 540 (611)
T 1nr0_A 463 VAVGGQDSKVHVYKLSGASVSEVKT-I-VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 540 (611)
T ss_dssp EEEEETTSEEEEEEEETTEEEEEEE-E-ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred EEEeCCCCeEEEEEccCCceeeeec-c-CCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccccee
Confidence 99999999999999987653 233 3 3889999999999999999999999999999987 655543 33 888999
Q ss_pred EEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 283 CMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 283 ~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
+++|+|+|++|++++.|++|++|++..+.
T Consensus 541 ~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 541 CVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred EEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 99999999999999999999999987654
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9e-34 Score=338.90 Aligned_cols=289 Identities=26% Similarity=0.452 Sum_probs=249.4
Q ss_pred ccccccccc-CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCc
Q 002266 6 VKLREAHKC-GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHS 84 (945)
Q Consensus 6 i~~~~aH~~-gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~ 84 (945)
+.+++.|+. ||.+.|++|+|+|||++||+++ .|+.|+|||. ++ .....+.+|...|++++|+|++++|++++.|++
T Consensus 4 ~~~~e~~~L~GH~~~V~~~a~spdg~~las~~-~d~~v~iWd~-~~-~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~ 80 (577)
T 2ymu_A 4 MGVKERNRLEAHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNR-NG-QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 80 (577)
T ss_dssp ECCCEEEEECCCSSCEEEEEECTTSSCEEEEE-TTSEEEEECT-TS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCcEEeeEECCCCCcEEEEEECCCCCEEEEEe-CCCEEEEEEC-CC-CEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 344444432 7889999999999999999987 8999999995 33 567788999999999999999999999999999
Q ss_pred EEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCe----------------------------
Q 002266 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS---------------------------- 136 (945)
Q Consensus 85 V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~---------------------------- 136 (945)
|+|||+ +++.+..+..|...|.+++|+|++++|++++.|+.+++|+.....
T Consensus 81 i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 159 (577)
T 2ymu_A 81 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASD 159 (577)
T ss_dssp EEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccc
Confidence 999996 577788899999999999999999999999999999999964321
Q ss_pred ------------EEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC
Q 002266 137 ------------IARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204 (945)
Q Consensus 137 ------------~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp 204 (945)
.......|...|.++.|+|++.+|++++.||.|++||. +++.+..+. .+...+.+++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~-------~~~~~v~~~~~s~ 231 (577)
T 2ymu_A 160 DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-------GHSSSVRGVAFSP 231 (577)
T ss_dssp TSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE-------CCSSCEEEEEECT
T ss_pred ccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe-------cCCCCEEEEEECC
Confidence 11223457788999999999999999999999999996 455555544 3457789999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEE
Q 002266 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCM 284 (945)
Q Consensus 205 dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~l 284 (945)
+|++|++++.|+.|++||.. ++.+..+.+ |...|.+++|+|++++|++++.|+.|++||...........|...|+++
T Consensus 232 dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~-~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~ 309 (577)
T 2ymu_A 232 DGQTIASASDDKTVKLWNRN-GQLLQTLTG-HSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV 309 (577)
T ss_dssp TSSCEEEEETTSCEEEECTT-SCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEE
T ss_pred CCCEEEEEeCCCEEEEEeCC-CCEEEEEec-CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEE
Confidence 99999999999999999964 667777776 8999999999999999999999999999998765555556788999999
Q ss_pred EEecCCCEEEEEEcCCeEEEEecC
Q 002266 285 AWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 285 a~spdg~~Las~s~DG~I~iWd~~ 308 (945)
+|+|+++.|++++.||.|++|+..
T Consensus 310 ~~~~~~~~l~t~~~d~~i~~w~~~ 333 (577)
T 2ymu_A 310 AFSPDGQTIASASDDKTVKLWNRN 333 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT
T ss_pred EECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999964
No 18
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.3e-35 Score=322.37 Aligned_cols=296 Identities=23% Similarity=0.332 Sum_probs=253.8
Q ss_pred cccccccccccCCCCCEEEEEECCC-CCEEEEEEcCCCeEEEEcCCCCcc----ccccccccccceEEEEEecCCCEEEE
Q 002266 4 RSVKLREAHKCGNAASFCSILWDQQ-AHHLVTASSSETTISIHDPLLPSN----LPKILRHHRDGVTALALSPNSTCLAS 78 (945)
Q Consensus 4 ~~i~~~~aH~~gh~~~V~svafspd-g~~L~t~g~~dg~V~IWd~~~~~~----~~~~l~~h~~~V~~la~spdg~~Las 78 (945)
+++.++.... ||.+.|++|+|+|+ +++|++++ .|++|+|||+..... ....+.+|...|.+++|+|++++|++
T Consensus 26 ~~~~l~~tL~-GH~~~V~~v~~sp~~~~~l~S~s-~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 26 EQMTLRGTLK-GHNGWVTQIATTPQFPDMILSAS-RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp CEEEEEEEEC-CCSSCEEEEEECTTCTTEEEEEE-TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CceEEEEEEC-CccCCEEEEEEeCCCCCEEEEEc-CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 3445555556 88899999999998 57888876 999999999865432 34567889999999999999999999
Q ss_pred EEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEE-EEEecCCCCEEEEEEccCC
Q 002266 79 GSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA-RVLKGHKGPVTGLAFDPNS 157 (945)
Q Consensus 79 gs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~-~~l~~h~~~V~~lafspdg 157 (945)
++.|+.|++|+............+...+..+.+++++.+|++++.|+.+++||+...... ....+|...+..++|++++
T Consensus 104 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 183 (340)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS
T ss_pred EcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC
Confidence 999999999999999888888888889999999999999999999999999999776543 3456789999999999865
Q ss_pred --CEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC
Q 002266 158 --EYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD 235 (945)
Q Consensus 158 --~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~ 235 (945)
.++++++.|+.|++||+++++.+..+. .+...|++++|+|++++|++++.|+.|++||+.+.+.+..+..
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~- 255 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHI-------GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG- 255 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEec-------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-
Confidence 478899999999999999998877765 3557899999999999999999999999999999999888874
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec----------cCCCCeeEEEEecCCCEEEEEEcCCeEEEE
Q 002266 236 HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ----------KFDDRICCMAWKPIGNALAVIDVMGKYGVW 305 (945)
Q Consensus 236 h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~----------~~~~~V~~la~spdg~~Las~s~DG~I~iW 305 (945)
...|.+++|+|++.+++ ++.|+.|+|||+.++..+... .|...|++++|+|++++|++|+.||.|+||
T Consensus 256 -~~~v~~~~~~~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW 333 (340)
T 4aow_A 256 -GDIINALCFSPNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 333 (340)
T ss_dssp -SSCEEEEEECSSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -CceEEeeecCCCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 46899999999986555 556999999999987765442 467789999999999999999999999999
Q ss_pred ecCCCC
Q 002266 306 ESVVPS 311 (945)
Q Consensus 306 d~~~~~ 311 (945)
++.+++
T Consensus 334 ~~~tGt 339 (340)
T 4aow_A 334 QVTIGT 339 (340)
T ss_dssp EEEC--
T ss_pred eCCCcC
Confidence 998764
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-35 Score=358.74 Aligned_cols=296 Identities=19% Similarity=0.276 Sum_probs=253.4
Q ss_pred cccccccccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCC
Q 002266 4 RSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDH 83 (945)
Q Consensus 4 ~~i~~~~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg 83 (945)
...+....+...+.+.+.+++|+|+|++|++++ ++.|+||++.++ .....+.+|...|++++|+|+|++||+|+.||
T Consensus 5 ~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~--~~~v~l~~~~~~-~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~ 81 (611)
T 1nr0_A 5 SQTALFPSLPRTARGTAVVLGNTPAGDKIQYCN--GTSVYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 81 (611)
T ss_dssp EEEEEECCCCCCCTTCCCCCEECTTSSEEEEEE--TTEEEEEETTCS-SCCEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccEECCCCCcccCceeEEeeCCCCCEEEeCC--CCEEEEecCCCc-ccCeEecCCCCceEEEEECCCCcEEEEEeCCC
Confidence 334444434334567889999999999999886 569999998765 45677889999999999999999999999999
Q ss_pred cEEEEEcCCCe--eeeecccCCCCEEEEEEecCCCEEEEEECC----CcEEEEEcCCCeEEEEEecCCCCEEEEEEccCC
Q 002266 84 SVKLYKFPGGE--FQTNITRFTLPIRVLAFNKSGSMLAAAGDD----EGIKLINTIDGSIARVLKGHKGPVTGLAFDPNS 157 (945)
Q Consensus 84 ~V~iwdl~~g~--~~~~l~~~~~~V~~l~fspdg~~Lasgs~D----g~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg 157 (945)
+|+|||+.+++ ....+..|..+|.+++|+|++++|++++.+ +.|++|| .+.....+.+|...|.+++|+|++
T Consensus 82 ~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~ 159 (611)
T 1nr0_A 82 NVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSR 159 (611)
T ss_dssp EEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSS
T ss_pred CEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCC
Confidence 99999986543 345677899999999999999999999875 3677776 566667788999999999999998
Q ss_pred C-EEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC--
Q 002266 158 E-YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG-- 234 (945)
Q Consensus 158 ~-~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~-- 234 (945)
. .|++++.|++|++||..+++....+. .|...|.+++|+|+|++|++++.|+.|++||..+++.+..+..
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~~~~~~~l~-------~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~ 232 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPPFKFKSTFG-------EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS 232 (611)
T ss_dssp SCEEEEEETTSCEEEEETTTBEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT
T ss_pred CeEEEEEeCCCeEEEEECCCCeEeeeec-------cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccc
Confidence 7 69999999999999998887766654 4667899999999999999999999999999999998887742
Q ss_pred ----CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee------------------------------------
Q 002266 235 ----DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR------------------------------------ 274 (945)
Q Consensus 235 ----~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~------------------------------------ 274 (945)
.|...|.+++|+|+|++|++++.|++|+|||+.+++.+..
T Consensus 233 ~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~ 312 (611)
T 1nr0_A 233 LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 312 (611)
T ss_dssp SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCC
Confidence 4999999999999999999999999999999988765432
Q ss_pred --------ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 275 --------QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 275 --------~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
..|...|++++|+|+|++|++++.||.|++||+..+.
T Consensus 313 ~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 313 LGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 2577889999999999999999999999999987654
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=322.03 Aligned_cols=283 Identities=15% Similarity=0.212 Sum_probs=254.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|++++|+|+|++|++++ .||.|+|||+.++ .....+.+|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCS-KDSSASVWYSLNG-ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEE-SSSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred EeeceEEEEEEcCCCCEEEEEe-CCCEEEEEeCCCc-hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 6779999999999999999987 8999999998876 4567788899999999999999999999999999999999999
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEEECC-----CcEEEEEcCCCe-----------EEEEEecCCC--CEEEEEEccC
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDD-----EGIKLINTIDGS-----------IARVLKGHKG--PVTGLAFDPN 156 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasgs~D-----g~I~iwd~~~~~-----------~~~~l~~h~~--~V~~lafspd 156 (945)
....+. +...+.+++|+|++.+|++++.+ +.|.+||+.... ....+..|.. .+.+++|+|+
T Consensus 108 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 108 CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 888777 88899999999999999999999 999999997653 3345556666 9999999999
Q ss_pred CCEEEEEeCCCcEEEEEccC-CeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC
Q 002266 157 SEYLASIDSIGTVIYWELQS-GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD 235 (945)
Q Consensus 157 g~~Las~s~Dg~I~iwDl~t-~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~ 235 (945)
+++|++++.||.|++||+++ ...+..+. .+...+.+++|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-- 257 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNNYEYVDSID-------LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-- 257 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTTTEEEEEEE-------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEEEe-------cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--
Confidence 99999999999999999998 56666654 345779999999999999999999999999999999888876
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCC--------------eEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCC
Q 002266 236 HVQPICFLSWSPNGKYMATSSLDR--------------QILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 236 h~~~I~~l~fSpdg~~Lasgs~Dg--------------~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG 300 (945)
+...+..++|+|+++++++++.++ .+++||+.+++.+.. ..|...|++++|+|++++|++++.||
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCC
Confidence 678999999999999999999888 899999999888776 45788999999999999999999999
Q ss_pred eEEEEecCC
Q 002266 301 KYGVWESVV 309 (945)
Q Consensus 301 ~I~iWd~~~ 309 (945)
.|++|++..
T Consensus 338 ~v~iw~~~~ 346 (369)
T 3zwl_B 338 FIRLHHFEK 346 (369)
T ss_dssp EEEEEEECH
T ss_pred eEEEEECcc
Confidence 999999864
No 21
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.8e-35 Score=333.16 Aligned_cols=301 Identities=17% Similarity=0.193 Sum_probs=256.1
Q ss_pred CCccccccccccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-----cccccccccccceEEEEEecC---
Q 002266 1 MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-----NLPKILRHHRDGVTALALSPN--- 72 (945)
Q Consensus 1 Mk~~~i~~~~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-----~~~~~l~~h~~~V~~la~spd--- 72 (945)
|+-..++...... +|.+.|++++|+| ++|++++ .||.|+||++.... .....+..|...|++++|+|+
T Consensus 1 m~~~~~~~~~~~~-~h~~~i~~~~~~~--~~l~s~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 76 (397)
T 1sq9_A 1 MSKVFIATANAGK-AHDADIFSVSACN--SFTVSCS-GDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIER 76 (397)
T ss_dssp --CEEEEEEEESS-CSSSCEEEEEECS--SEEEEEE-TTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEET
T ss_pred Cchhhhhhhhhhh-hhhcCeEEEEecC--CeEEEEc-CCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEeccccc
Confidence 3433344444445 7789999999999 7888886 89999999987764 245667789999999999999
Q ss_pred -C---CEEEEEEcCCcEEEEEcCCCee-----eeecccC-----CCCEEEEEEe----cCCCE-EEEEECCCcEEEEEcC
Q 002266 73 -S---TCLASGSIDHSVKLYKFPGGEF-----QTNITRF-----TLPIRVLAFN----KSGSM-LAAAGDDEGIKLINTI 133 (945)
Q Consensus 73 -g---~~Lasgs~Dg~V~iwdl~~g~~-----~~~l~~~-----~~~V~~l~fs----pdg~~-Lasgs~Dg~I~iwd~~ 133 (945)
+ .+|++++.||.|++|++.+++. ...+..| ...|.+++|+ |++.+ |++++.||.|++||+.
T Consensus 77 ~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 156 (397)
T 1sq9_A 77 DAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 156 (397)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEE
T ss_pred CCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCC
Confidence 9 9999999999999999988876 7777777 4899999999 99999 9999999999999998
Q ss_pred C------CeEEE-----EEe-------cCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCC--
Q 002266 134 D------GSIAR-----VLK-------GHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSD-- 193 (945)
Q Consensus 134 ~------~~~~~-----~l~-------~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~-- 193 (945)
+ +..+. .+. .|...|.+++|+|++ +|++++.||.|++||+++++.+..+... ..|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~h~~ 231 (397)
T 1sq9_A 157 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ----HSMIN 231 (397)
T ss_dssp SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC----C---C
T ss_pred ccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc----ccccc
Confidence 8 65554 663 488999999999999 9999999999999999999888777531 114
Q ss_pred -CCCceEEEEcCCCCEEEEEeCC---CeEEEEECCCCcEEEeecCC------------CCCCeEEEEEcCCCCEEEEEEC
Q 002266 194 -PSSMNVLSWSPDGETLAVPGLK---NDVVMYDRDTAEKLFSLRGD------------HVQPICFLSWSPNGKYMATSSL 257 (945)
Q Consensus 194 -~~~i~~l~~spdg~~La~gs~d---g~I~vwD~~t~~~~~~~~~~------------h~~~I~~l~fSpdg~~Lasgs~ 257 (945)
...+.+++|+|++++|++++.+ +.|++||+.+++.+..+... |...|.+++|+|++++|++++.
T Consensus 232 ~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 232 NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp CCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred cCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 5779999999999999999999 99999999999988887642 7889999999999999999999
Q ss_pred CCeEEEEECCCCeeeeecc-------C---------------CCCeeEEEEecCC----------CEEEEEEcCCeEEEE
Q 002266 258 DRQILIWDVGKKLDIDRQK-------F---------------DDRICCMAWKPIG----------NALAVIDVMGKYGVW 305 (945)
Q Consensus 258 Dg~I~IWD~~~~~~i~~~~-------~---------------~~~V~~la~spdg----------~~Las~s~DG~I~iW 305 (945)
||.|+|||+.+++.+.... | ...|++++|+|++ ++|++++.||.|++|
T Consensus 312 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 312 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence 9999999999998877744 5 7899999999998 799999999999999
Q ss_pred ecCCC
Q 002266 306 ESVVP 310 (945)
Q Consensus 306 d~~~~ 310 (945)
++..+
T Consensus 392 ~~~~g 396 (397)
T 1sq9_A 392 REAGG 396 (397)
T ss_dssp EEEC-
T ss_pred EcCCC
Confidence 98643
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.8e-35 Score=347.28 Aligned_cols=277 Identities=27% Similarity=0.480 Sum_probs=248.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|.+++|+|+++.|++++ .|+.|++||.... ....+..|...|.+++|+|++++|++++.||.|++|+. +++
T Consensus 301 ~h~~~v~~~~~~~~~~~l~t~~-~d~~i~~w~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~ 376 (577)
T 2ymu_A 301 GHSSSVWGVAFSPDGQTIASAS-DDKTVKLWNRNGQ--HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQ 376 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCC
T ss_pred cCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCCC--eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCC
Confidence 6779999999999999999987 8999999997543 34567789999999999999999999999999999995 567
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl 174 (945)
....+..|...|++++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 377 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~ 455 (577)
T 2ymu_A 377 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR 455 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 77888889999999999999999999999999999995 67788889999999999999999999999999999999996
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEE
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Las 254 (945)
+++.+..+. .|...+.+++|+|++++|++++.|+.|++||. +++.+..+.+ |...|++++|+|+|++||+
T Consensus 456 -~~~~~~~~~-------~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 456 -NGQLLQTLT-------GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIAS 525 (577)
T ss_dssp -TSCEEEEEE-------CCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC-CSSCEEEEEECTTSSCEEE
T ss_pred -CCCEEEEEc-------CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC-CCCCEEEEEEcCCCCEEEE
Confidence 445555544 35577999999999999999999999999996 5788888887 9999999999999999999
Q ss_pred EECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEe
Q 002266 255 SSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWE 306 (945)
Q Consensus 255 gs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd 306 (945)
++.||.|+|||...........|...|++++|+|+|++|++++.||.|++||
T Consensus 526 ~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 526 ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999999975444444467899999999999999999999999999997
No 23
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-34 Score=317.31 Aligned_cols=253 Identities=18% Similarity=0.287 Sum_probs=231.0
Q ss_pred ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEc
Q 002266 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132 (945)
Q Consensus 53 ~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~ 132 (945)
...++.+|.+.|++++|+|++.+|++|+.||.|++||+.++.....+..|..+|.+++|+|++++|++|+.|+.|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCee-eeeecccCCCCCCCCCCceEEEEcC-CCCEEE
Q 002266 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE-LHNLKRVAPDIGSDPSSMNVLSWSP-DGETLA 210 (945)
Q Consensus 133 ~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~-i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La 210 (945)
.+++.+..+.+|...|.+++|+|++.+|++++.||+|++||++++.. ...+. .|...|.+++|+| ++.+|+
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-------GHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC-------CCCSCEEEEEECTTCTTEEE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc-------ccCCcEEEEEECCCCCCEEE
Confidence 99999999999999999999999999999999999999999988743 33333 4567899999999 689999
Q ss_pred EEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcC--CCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEe
Q 002266 211 VPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP--NGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWK 287 (945)
Q Consensus 211 ~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSp--dg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~s 287 (945)
+|+.|+.|++||+.+......+...|...+..+.|+| ++.+|++++.|+.|+|||+.++..+.. ..|...|.+++|+
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEEC
Confidence 9999999999999988877777665778999999987 788999999999999999999988776 5688999999999
Q ss_pred cCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 288 PIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 288 pdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
|++++|++++.||.|++||......
T Consensus 238 p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 238 PTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCce
Confidence 9999999999999999999876654
No 24
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.7e-34 Score=324.06 Aligned_cols=286 Identities=13% Similarity=0.175 Sum_probs=246.4
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-cccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g 93 (945)
.|...|++++|+|++++|++++ .++.|+|||+.+.. .....+.+|...|.+++|+|++++|++++.||.|++|++.++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICP-NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEEC-SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred ccCCCeEEEEECCCCCEEEEEe-CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 4669999999999999999986 89999999987652 156677889999999999999999999999999999999888
Q ss_pred eeeee--cccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeE---E-EEEecCCCCEEEEEEccCCCEEEEEeCCC
Q 002266 94 EFQTN--ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSI---A-RVLKGHKGPVTGLAFDPNSEYLASIDSIG 167 (945)
Q Consensus 94 ~~~~~--l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~---~-~~l~~h~~~V~~lafspdg~~Las~s~Dg 167 (945)
+.... +..|...|.+++|+|++++|++++.|+.|++||+..+.. . .....|...|.+++|+|++.+|++++.||
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 75443 466888999999999999999999999999999988762 2 33357899999999999999999999999
Q ss_pred cEEEEEcc------------------CCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Q 002266 168 TVIYWELQ------------------SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229 (945)
Q Consensus 168 ~I~iwDl~------------------t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~ 229 (945)
.|++||++ .+..+..+. .+...+.+++|+|++++|++++.|+.|++||+++++.+
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-------SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-------CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred CEEEEEcccccccccccccccccccchhhheEecC-------CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 99999964 444444443 45678999999999999999999999999999999999
Q ss_pred EeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC--Cee------------------------------------
Q 002266 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK--KLD------------------------------------ 271 (945)
Q Consensus 230 ~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~--~~~------------------------------------ 271 (945)
..+.. |...|.+++|+|++.+|+++ .|+.|++|++.+ +..
T Consensus 238 ~~~~~-~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (372)
T 1k8k_C 238 ATLAS-ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 315 (372)
T ss_dssp EEEEC-SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC------
T ss_pred EEEcc-CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCc
Confidence 88886 88899999999999988888 899999999987 421
Q ss_pred ---eee-ccCCCCeeEEEEe-cCC---CEEEEEEcCCeEEEEecCCC
Q 002266 272 ---IDR-QKFDDRICCMAWK-PIG---NALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 272 ---i~~-~~~~~~V~~la~s-pdg---~~Las~s~DG~I~iWd~~~~ 310 (945)
... ..|...|++++|+ ++| .+|++++.||.|++|++..+
T Consensus 316 ~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 316 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred cccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 111 3688899999977 566 89999999999999998654
No 25
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=327.52 Aligned_cols=289 Identities=10% Similarity=0.123 Sum_probs=243.6
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcC---CCeEEEEcCCCCccccccccccccceEEEEEecC---CCEEEEEEcCCcEEEE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSS---ETTISIHDPLLPSNLPKILRHHRDGVTALALSPN---STCLASGSIDHSVKLY 88 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~---dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spd---g~~Lasgs~Dg~V~iw 88 (945)
+|...|.+++|+|++..++++++. |+.|+|||+.++.........|...|.+++|+|+ +.+|++|+.||.|++|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 688999999999999888777655 8999999998765443444578999999999998 6999999999999999
Q ss_pred EcCCCe-eeeecccCCCCEEEEEE------ecCCCEEEEEECCCcEEEEEcCCCe-EEEEEecCCC----CEEEEE----
Q 002266 89 KFPGGE-FQTNITRFTLPIRVLAF------NKSGSMLAAAGDDEGIKLINTIDGS-IARVLKGHKG----PVTGLA---- 152 (945)
Q Consensus 89 dl~~g~-~~~~l~~~~~~V~~l~f------spdg~~Lasgs~Dg~I~iwd~~~~~-~~~~l~~h~~----~V~~la---- 152 (945)
++.+++ ....+..|...|.++.| +|++++|++++.|+.|++||+.++. ....+..|.+ .|.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 999887 77888899999999955 6789999999999999999999886 6777766655 899998
Q ss_pred EccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEE
Q 002266 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP---DGETLAVPGLKNDVVMYDRDTAEKL 229 (945)
Q Consensus 153 fspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp---dg~~La~gs~dg~I~vwD~~t~~~~ 229 (945)
|+|++.+|++++.||.|++||+++++..... .+...+.+++|+| ++.+|++++.++.|++||+++++.+
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWET--------NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT 247 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEE--------ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeec--------CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence 7889999999999999999999998865443 2346789999999 9999999999999999999876644
Q ss_pred Eeec----CCCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCe-------------------eee-eccCCCCeeEE
Q 002266 230 FSLR----GDHVQPICFLSWSPNGK-YMATSSLDRQILIWDVGKKL-------------------DID-RQKFDDRICCM 284 (945)
Q Consensus 230 ~~~~----~~h~~~I~~l~fSpdg~-~Lasgs~Dg~I~IWD~~~~~-------------------~i~-~~~~~~~V~~l 284 (945)
..+. ..|...|++++|+|+++ +|++++.||.|+|||+..+. .+. ...|...|+++
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~ 327 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSL 327 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEE
T ss_pred cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEE
Confidence 3332 13889999999999998 89999999999999997542 222 25578899999
Q ss_pred EEecCCCEEE-EEEcCCeEEEEecCCCC
Q 002266 285 AWKPIGNALA-VIDVMGKYGVWESVVPS 311 (945)
Q Consensus 285 a~spdg~~La-s~s~DG~I~iWd~~~~~ 311 (945)
+|+|++++|+ +++.||.|++|++....
T Consensus 328 ~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 328 DWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred EEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999999888 79999999999987543
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.2e-34 Score=352.40 Aligned_cols=283 Identities=24% Similarity=0.326 Sum_probs=245.2
Q ss_pred CCCCCEEEEEECCCC-CEEEEEEcCCCeEEEEcCCCCcc----ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEE
Q 002266 15 GNAASFCSILWDQQA-HHLVTASSSETTISIHDPLLPSN----LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 15 gh~~~V~svafspdg-~~L~t~g~~dg~V~IWd~~~~~~----~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd 89 (945)
+|.+.|++|+|+|++ ++|++++ .|++|+||++..... ....+.+|...|.+++|+|++++|++|+.||+|++||
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s-~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSAS-RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEE-TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEe-CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 777999999999976 5666665 999999999875432 2346788999999999999999999999999999999
Q ss_pred cCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE---ecCCCCEEEEEEccCC--CEEEEEe
Q 002266 90 FPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL---KGHKGPVTGLAFDPNS--EYLASID 164 (945)
Q Consensus 90 l~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l---~~h~~~V~~lafspdg--~~Las~s 164 (945)
+.++.....+..|...|.+++|+|++++|++|+.|++|++||+......... .+|...|.+++|+|++ .+|++++
T Consensus 459 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 459 LAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred CCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe
Confidence 9999999999999999999999999999999999999999998665443332 3688899999999987 5899999
Q ss_pred CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEE
Q 002266 165 SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244 (945)
Q Consensus 165 ~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~ 244 (945)
.||.|++||+++++....+. .|...|++++|+|+|++|++++.|+.|++||+.+++.+..+. +...|.+++
T Consensus 539 ~d~~v~vwd~~~~~~~~~~~-------~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~ 609 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLRSTLA-------GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE--ANSVIHALC 609 (694)
T ss_dssp TTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--CSSCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEc-------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--CCCcEEEEE
Confidence 99999999999988776664 456789999999999999999999999999999999888776 456899999
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCeeeeeccC--------------------CCCeeEEEEecCCCEEEEEEcCCeEEE
Q 002266 245 WSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF--------------------DDRICCMAWKPIGNALAVIDVMGKYGV 304 (945)
Q Consensus 245 fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~--------------------~~~V~~la~spdg~~Las~s~DG~I~i 304 (945)
|+|++.+|++++ ++.|+|||+.++..+..... ...+++++|+|+|++|++|+.||.|++
T Consensus 610 ~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i 688 (694)
T 3dm0_A 610 FSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV 688 (694)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence 999999888876 56699999999887754321 113689999999999999999999999
Q ss_pred EecC
Q 002266 305 WESV 308 (945)
Q Consensus 305 Wd~~ 308 (945)
|++.
T Consensus 689 W~i~ 692 (694)
T 3dm0_A 689 WGIG 692 (694)
T ss_dssp EEC-
T ss_pred Eecc
Confidence 9974
No 27
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.3e-32 Score=359.33 Aligned_cols=295 Identities=19% Similarity=0.267 Sum_probs=259.4
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|.+.|++++|+|+|++|++++ .||.|+|||..++ .....+.+|...|.+++|+|++++|++|+.||.|++||+.+++
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~-~d~~i~vw~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCG-ADKTLQVFKAETG-EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cccccEEEEEECCCCCEEEEEe-CCCeEEEEECCCC-CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc
Confidence 6789999999999999999987 9999999999877 4566778999999999999999999999999999999999999
Q ss_pred eeeecccCCCCEEEEEEec--CCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 002266 95 FQTNITRFTLPIRVLAFNK--SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYW 172 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fsp--dg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iw 172 (945)
....+..|...|.+++|+| ++.++++|+.|+.|++||+.++.....+.+|...|.+++|+|++.+|++++.||.|++|
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 9999999999999999999 56689999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCeeeeeecccCC------------------------------------------------CCCCCCCCceEEEEcC
Q 002266 173 ELQSGRELHNLKRVAP------------------------------------------------DIGSDPSSMNVLSWSP 204 (945)
Q Consensus 173 Dl~t~~~i~~~~~~~~------------------------------------------------~~~~~~~~i~~l~~sp 204 (945)
|+.++.....+..... ....+...+.+++|+|
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 9998876554431100 0014456788999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeee------------
Q 002266 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI------------ 272 (945)
Q Consensus 205 dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i------------ 272 (945)
++.++++++.++.|++||+.++..+..+.+ |...|.+++|+|+|++|++++.||.|++|++.+....
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 929 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDSRLKVADCRG-HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVV 929 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeecCC-CccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEE
Confidence 999999999999999999999999988887 9999999999999999999999999999997531100
Q ss_pred --------------------------eeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 273 --------------------------DRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 273 --------------------------~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
........+.+++|+|+++++++++.+|.|.+|++..+..
T Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~ 995 (1249)
T 3sfz_A 930 FQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRV 995 (1249)
T ss_dssp EETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSC
T ss_pred EcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCce
Confidence 0011245799999999999999999999999999876554
No 28
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-34 Score=323.59 Aligned_cols=289 Identities=12% Similarity=0.209 Sum_probs=244.0
Q ss_pred CCCCCEEEEEECCC----CCEEEEEEcCCCeEEEEcCCCCccccccccc-----cccceEEEEEecC----CCEEEEEEc
Q 002266 15 GNAASFCSILWDQQ----AHHLVTASSSETTISIHDPLLPSNLPKILRH-----HRDGVTALALSPN----STCLASGSI 81 (945)
Q Consensus 15 gh~~~V~svafspd----g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~-----h~~~V~~la~spd----g~~Lasgs~ 81 (945)
+|...|++++|+|+ ...+++++ .++.|+||+..+... ...+.. |...|++++|+|+ +.+|++|+.
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~-~~~~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATV-GSNRVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEE-ETTEEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCCceEEEEEecccCCCCceEEEEC-CCCEEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 67799999999984 44555554 677999999876533 333332 5678999999998 679999999
Q ss_pred CCcEEEEEcCCCeeeeecccCCCCEEEEEEec-CCCEEEEEECCCcEEEEEcCCCeEEEEE---ecCCCCEEEEEEccCC
Q 002266 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNK-SGSMLAAAGDDEGIKLINTIDGSIARVL---KGHKGPVTGLAFDPNS 157 (945)
Q Consensus 82 Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~iwd~~~~~~~~~l---~~h~~~V~~lafspdg 157 (945)
||.|++||+.+++....+..|...|.+++|+| ++.+|++++.||.|++||+.+++....+ ..|...|.+++|+|++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 99999999999999999999999999999999 9999999999999999999999988888 6899999999999999
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeeeeccc---------------------CCCCCCCCCCceEEEEcCCCCEEEEEeCCC
Q 002266 158 EYLASIDSIGTVIYWELQSGRELHNLKRV---------------------APDIGSDPSSMNVLSWSPDGETLAVPGLKN 216 (945)
Q Consensus 158 ~~Las~s~Dg~I~iwDl~t~~~i~~~~~~---------------------~~~~~~~~~~i~~l~~spdg~~La~gs~dg 216 (945)
.+|++++.||.|++||+++++....+... ......+...+.+++|+ +++|++++.|+
T Consensus 174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~ 251 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN 251 (366)
T ss_dssp SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS
T ss_pred CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC
Confidence 99999999999999999887554333210 00111266789999998 78999999999
Q ss_pred eEEEEECCCCcE--------------EEeecCCCCCCeEEEEEcCC--CCEEEEEECCCeEEEEECCCCeeee-----ec
Q 002266 217 DVVMYDRDTAEK--------------LFSLRGDHVQPICFLSWSPN--GKYMATSSLDRQILIWDVGKKLDID-----RQ 275 (945)
Q Consensus 217 ~I~vwD~~t~~~--------------~~~~~~~h~~~I~~l~fSpd--g~~Lasgs~Dg~I~IWD~~~~~~i~-----~~ 275 (945)
.|++||+.++.. +..+.. |...|++++|+|+ |++|++++.||.|+|||+.++.... ..
T Consensus 252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 330 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDY-SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT 330 (366)
T ss_dssp EEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC-SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC
T ss_pred EEEEEeCCCccccccccccCCcchheeccccc-cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc
Confidence 999999987643 556665 8889999999999 9999999999999999999875432 23
Q ss_pred cC--CCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 276 KF--DDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 276 ~~--~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.| ...|++++|+|++++|++++.||.|++||+.
T Consensus 331 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 331 HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 34 6899999999999999999999999999974
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.7e-34 Score=322.43 Aligned_cols=280 Identities=19% Similarity=0.233 Sum_probs=233.5
Q ss_pred CCCCCEEEEEECCCC-CEEEEEEcCCCeEEEEcCCCCccccccc--cccccceEEEEEec-CCCEEEEEEcCCcEEEEEc
Q 002266 15 GNAASFCSILWDQQA-HHLVTASSSETTISIHDPLLPSNLPKIL--RHHRDGVTALALSP-NSTCLASGSIDHSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafspdg-~~L~t~g~~dg~V~IWd~~~~~~~~~~l--~~h~~~V~~la~sp-dg~~Lasgs~Dg~V~iwdl 90 (945)
+|...|++++|+|++ ++|++++ .|+.|+|||+.+... ...+ .+|...|.+++|+| ++.+|++++.|+.|++||+
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGS-KGGDIILWDYDVQNK-TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEE-BTSCEEEEETTSTTC-EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred CCCCCEEEEEECCCCCCEEEEEc-CCCeEEEEeCCCccc-ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 677999999999999 8888886 899999999987643 3333 36999999999999 7899999999999999999
Q ss_pred CCCeeeeecccC---CCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCC-EEEEEeCC
Q 002266 91 PGGEFQTNITRF---TLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE-YLASIDSI 166 (945)
Q Consensus 91 ~~g~~~~~l~~~---~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~-~Las~s~D 166 (945)
.+.. ...+..+ ...|.+++|+|++.+|++|+.|+.|++||+ ++..+..+..|...|.+++|+|++. +|++++.|
T Consensus 149 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 149 SGSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp TSCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence 8643 4444433 478999999999999999999999999999 6778888999999999999999999 99999999
Q ss_pred CcEEEEEccC----CeeeeeecccCCCCCCCCCCceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEeecC------C
Q 002266 167 GTVIYWELQS----GRELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRG------D 235 (945)
Q Consensus 167 g~I~iwDl~t----~~~i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La~gs~dg~I~vwD~~t~~~~~~~~~------~ 235 (945)
|.|++||+++ +..+..+ .+...+.+++|+| +|++|++++.|+.|++||+++++.+..+.. .
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYIAEM--------PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp SEEEEEEGGGCCSTTCEEEEE--------ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred CEEEEEeCCCCCcccceEEEe--------cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence 9999999998 4444443 2457899999999 999999999999999999998876544432 1
Q ss_pred CC----------CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc---CCCCeeEEEEecCCCEEEEEEcCCeE
Q 002266 236 HV----------QPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK---FDDRICCMAWKPIGNALAVIDVMGKY 302 (945)
Q Consensus 236 h~----------~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~---~~~~V~~la~spdg~~Las~s~DG~I 302 (945)
|. ..+..++|+|+|++ +++.||.|+|||+.+++.+.... +...+..++|+|++++|++++ ||.|
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i 375 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNI 375 (383)
T ss_dssp TSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEE
T ss_pred cccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcE
Confidence 22 23444666666666 66789999999999998877754 456788889999999999997 9999
Q ss_pred EEEecCC
Q 002266 303 GVWESVV 309 (945)
Q Consensus 303 ~iWd~~~ 309 (945)
++|++..
T Consensus 376 ~iw~~~~ 382 (383)
T 3ei3_B 376 LIWNRED 382 (383)
T ss_dssp EEEECC-
T ss_pred EEEecCC
Confidence 9999853
No 30
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.6e-34 Score=326.43 Aligned_cols=251 Identities=23% Similarity=0.375 Sum_probs=234.1
Q ss_pred cccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC
Q 002266 54 PKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133 (945)
Q Consensus 54 ~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~ 133 (945)
...+.+|..+|++++|+|++.+|++|+.||.|++||+.+++....+.+|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 44677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe
Q 002266 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG 213 (945)
Q Consensus 134 ~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs 213 (945)
++..+..+.+|...|.+++|+|++.+|++++.|++|++||++++..+..+. .|...+.+++|+|+|.+|++++
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-------~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-------GHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-------CCCccEEEEEECCCCCEEEEEc
Confidence 999999999999999999999999999999999999999999998887765 3456789999999999999999
Q ss_pred CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCC--------------------CCEEEEEECCCeEEEEECCCCeeee
Q 002266 214 LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN--------------------GKYMATSSLDRQILIWDVGKKLDID 273 (945)
Q Consensus 214 ~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpd--------------------g~~Lasgs~Dg~I~IWD~~~~~~i~ 273 (945)
.|+.|++||+.+++....+.+ |...|.+++|+|+ |.+|++|+.|+.|+|||+.++..+.
T Consensus 254 ~D~~v~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 254 NDQTVRVWVVATKECKAELRE-HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332 (410)
T ss_dssp TTSCEEEEETTTCCEEEEECC-CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCceeeEecC-CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 999999999999998888876 9999999999996 6799999999999999999998877
Q ss_pred e-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 274 R-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 274 ~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
. ..|...|++++|+|++++|++++.||.|++||...+..
T Consensus 333 ~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp EEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred EEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 6 56888999999999999999999999999999876554
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.8e-34 Score=327.76 Aligned_cols=289 Identities=17% Similarity=0.169 Sum_probs=247.7
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
..+++++|+|+|++|++++ .|+.|++||..+. .....+..| ..+....|++++++|++|+.||.|++|++.+++...
T Consensus 57 ~~~~~~~~s~~g~~l~~~~-~d~~v~i~d~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 133 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKAR-LDGHDFLFNTIIR-DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE 133 (420)
T ss_dssp BCCTTCEEEEEETTEEEEE-ETTEEEEEECCSE-ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE
T ss_pred ccccceeeeecCCeEEEEE-cCCcEEEEEeccc-ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee
Confidence 3455789999999999997 8999999998776 334455555 445556789999999999999999999999999888
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCC
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~ 177 (945)
.+..|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.||.|++||++++
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecccCCCC-----------------CCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCe
Q 002266 178 RELHNLKRVAPDI-----------------GSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240 (945)
Q Consensus 178 ~~i~~~~~~~~~~-----------------~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I 240 (945)
+.+..+....... ..+...+.+++|+|+|++|++++.+|.|++||+++++.+..+...|...|
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 293 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSC 293 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCE
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCc
Confidence 8888776432110 01224455667789999999999999999999999998888877788999
Q ss_pred EEEEEcCCCC-EEEEEECCCeEEEEECCCCee-eee-cc-CCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCC
Q 002266 241 CFLSWSPNGK-YMATSSLDRQILIWDVGKKLD-IDR-QK-FDDRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 241 ~~l~fSpdg~-~Lasgs~Dg~I~IWD~~~~~~-i~~-~~-~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~ 310 (945)
.+++|+|++. +|++++.||.|++||+.++.. +.. .. +...|+++.| +++++|++++.||.|++|++..+
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 9999999999 999999999999999988643 333 33 5677888855 57789999999999999998764
No 32
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-34 Score=323.76 Aligned_cols=280 Identities=18% Similarity=0.253 Sum_probs=249.4
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCee
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~ 95 (945)
|...|++++|+|++++|++++ .||.|++||. ++ .....+..|...|.+++|+|++++|++++.||.|++|++.+++.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGV-ENGELRLWNK-TG-ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEE-TTSCEEEEET-TS-CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred CCCceEEEEEcCCCCEEEEEe-CCCeEEEEeC-CC-CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 567999999999999999987 8999999993 33 45667788999999999999999999999999999999999998
Q ss_pred eeecccCCCC---------------EEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEE
Q 002266 96 QTNITRFTLP---------------IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYL 160 (945)
Q Consensus 96 ~~~l~~~~~~---------------V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~L 160 (945)
...+..+... +.+++|++++ .+++++.++.|++||+.++.....+..|...|.+++|+|++++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 8888777666 8999999874 68899999999999999999888999999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCe
Q 002266 161 ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240 (945)
Q Consensus 161 as~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I 240 (945)
++++.||.|++||+++++.+..+. .+...+.+++|+|++ +|++++.++.|++||+.+++.+..+.. |...|
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i 333 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFY-------GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-DGVPI 333 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEEC-------CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-TTCCE
T ss_pred EEEcCCCEEEEEECCCCccceEec-------CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-CCccE
Confidence 999999999999999887766664 345778999999999 999999999999999999998888876 88999
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCe--------------------eeee-ccCCC--CeeEEEEecCCCEEEEEE
Q 002266 241 CFLSWSPNGKYMATSSLDRQILIWDVGKKL--------------------DIDR-QKFDD--RICCMAWKPIGNALAVID 297 (945)
Q Consensus 241 ~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~--------------------~i~~-~~~~~--~V~~la~spdg~~Las~s 297 (945)
.+++|+|+|++|++++.||.|+|||+.++. .+.. ..|.. .|++++|+|++++|++++
T Consensus 334 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 334 FAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 999999999999999999999999998876 5555 34544 999999999999999999
Q ss_pred cCCeEEEEecC
Q 002266 298 VMGKYGVWESV 308 (945)
Q Consensus 298 ~DG~I~iWd~~ 308 (945)
.||.|++|++.
T Consensus 414 ~dg~i~iw~~~ 424 (425)
T 1r5m_A 414 SLQEGSVVAIP 424 (425)
T ss_dssp SSSCCEEEECC
T ss_pred cCceEEEEeec
Confidence 99999999974
No 33
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=313.87 Aligned_cols=243 Identities=20% Similarity=0.296 Sum_probs=226.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|.+++|++++..+++++ .|++|+|||+.++ .....+..|...+.+++|+|++++|++|+.+|.|++|++.+++
T Consensus 78 gh~~~v~~~~~~~~~~~l~s~s-~D~~i~lWd~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~ 155 (321)
T 3ow8_A 78 GHQLGVVSVDISHTLPIAASSS-LDAHIRLWDLENG-KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK 155 (321)
T ss_dssp CCSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTT-EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS
T ss_pred cCCCCEEEEEECCCCCEEEEEe-CCCcEEEEECCCC-CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc
Confidence 7889999999999999999887 9999999999876 4456677888899999999999999999999999999999998
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl 174 (945)
....+..+...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.||.|++||+
T Consensus 156 ~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 156 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 88888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEE
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Las 254 (945)
+++.....+. .|...|.+++|+|++.+|++++.|+.|++||+.+++++..+.+ |...|.+++|+|+|++|++
T Consensus 236 ~~~~~~~~~~-------~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 236 QHANLAGTLS-------GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp TTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred CCcceeEEEc-------CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEE
Confidence 9988776664 4567799999999999999999999999999999999999887 9999999999999999999
Q ss_pred EECCCeEEEEECC
Q 002266 255 SSLDRQILIWDVG 267 (945)
Q Consensus 255 gs~Dg~I~IWD~~ 267 (945)
++.||.|+|||..
T Consensus 308 ~~~d~~i~vwd~p 320 (321)
T 3ow8_A 308 VGDDQEIHIYDCP 320 (321)
T ss_dssp EETTCCEEEEECC
T ss_pred EeCCCeEEEEeCC
Confidence 9999999999963
No 34
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-33 Score=302.93 Aligned_cols=278 Identities=13% Similarity=0.153 Sum_probs=245.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g- 93 (945)
+|.+.|++++| |++++|++++ .||.|+|||+.+. .....+..|...|.+++|+|++.+|++++.||.|++|++...
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~-~dg~v~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVS-RDGTVRLWSKDDQ-WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS 92 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEE-TTSEEEEEEESSS-EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred CCCCCcEEEEe-cCCCEEEEEE-cCCcEEEEECCCC-EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence 67799999999 9999999987 9999999998665 556677889999999999999999999999999999998654
Q ss_pred --eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEcc-CCCEEEEEeCCCcEE
Q 002266 94 --EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP-NSEYLASIDSIGTVI 170 (945)
Q Consensus 94 --~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafsp-dg~~Las~s~Dg~I~ 170 (945)
+....+..|...|.++.| ++.++++++.|+.|++|| .+.....+..|...|.+++|.| ++.+|++++.||.|+
T Consensus 93 ~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 168 (313)
T 3odt_A 93 GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIK 168 (313)
T ss_dssp TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEE
Confidence 456677889999999999 578999999999999999 7778888999999999999998 899999999999999
Q ss_pred EEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCC
Q 002266 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGK 250 (945)
Q Consensus 171 iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~ 250 (945)
+|| .......+.. .+...+.+++|+|++. +++++.++.|++||+++++.+..+.. |...|++++|+|++
T Consensus 169 i~d--~~~~~~~~~~------~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 169 LWQ--NDKVIKTFSG------IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNG- 237 (313)
T ss_dssp EEE--TTEEEEEECS------SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTS-
T ss_pred EEe--cCceEEEEec------cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc-CCceEEEEEEecCC-
Confidence 999 3444444432 2457799999999998 88999999999999999999988886 88999999999999
Q ss_pred EEEEEECCCeEEEEECCCCeeeeec-cCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 251 YMATSSLDRQILIWDVGKKLDIDRQ-KFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 251 ~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
.|++++.||.|++||+.+++.+... .+...|++++|+|+++ +++++.||.|++|++..+.
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence 6899999999999999999887764 4667999999999998 6679999999999987544
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-35 Score=331.51 Aligned_cols=293 Identities=14% Similarity=0.160 Sum_probs=231.7
Q ss_pred cccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-cccccccccccceEEEEEecCCCEEEEEEcCCcEEEE
Q 002266 10 EAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88 (945)
Q Consensus 10 ~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iw 88 (945)
..|. .|.+.|++++|+|+|++|++++ .|+.|+||++.+.. .....+.+|...|++++|+|++++|++++.|+.|++|
T Consensus 5 ~~~~-~~~~~v~~~~~s~~g~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 5 QVLH-ILPKPSYEHAFNSQRTEFVTTT-ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEE-ECSSCCSCCEECSSSSEEECCC-SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred eeEe-cCCCcEEEEEECCCCCEEEEec-CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 3455 4568999999999999999886 89999999987653 4567788999999999999999999999999999999
Q ss_pred EcCCCe---eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCe---EEEEEec-CCCCEEEEEEccCCCEEE
Q 002266 89 KFPGGE---FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS---IARVLKG-HKGPVTGLAFDPNSEYLA 161 (945)
Q Consensus 89 dl~~g~---~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~---~~~~l~~-h~~~V~~lafspdg~~La 161 (945)
|+.++. ....+..|...|.+++|+|++++|++++.|+.|++||+.++. ....+.. |...|.+++|+|++++|+
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 998877 566677899999999999999999999999999999998876 4677777 999999999999999999
Q ss_pred EEeCCCcEEEEEccCCeeeee-----------ecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE--
Q 002266 162 SIDSIGTVIYWELQSGRELHN-----------LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-- 228 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t~~~i~~-----------~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~-- 228 (945)
+++.||.|++||+........ ........ .|...+.+++|+|+|++|++++.|+.|++||+.+++.
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 999999999999964321100 00000112 5667899999999999999999999999999999887
Q ss_pred --EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCee--e--------------------------------
Q 002266 229 --LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLD--I-------------------------------- 272 (945)
Q Consensus 229 --~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~--i-------------------------------- 272 (945)
+..+.. |...|.+++|+|+|++|++++.++.+ +|+...... .
T Consensus 242 ~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (377)
T 3dwl_C 242 RALITVKL-SQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA 319 (377)
T ss_dssp EECCCEEC-SSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------
T ss_pred eeeEeecC-CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccc
Confidence 566665 88999999999999999999866655 676542110 0
Q ss_pred --e-----------------eccCCCCeeEEEEecCC-C---EEEEEEcCCeEEEEec
Q 002266 273 --D-----------------RQKFDDRICCMAWKPIG-N---ALAVIDVMGKYGVWES 307 (945)
Q Consensus 273 --~-----------------~~~~~~~V~~la~spdg-~---~Las~s~DG~I~iWd~ 307 (945)
. ...|...|+++++.+.. . .|++++.||.|++||+
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 320 LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 01277889999977643 3 6999999999999985
No 36
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-33 Score=311.25 Aligned_cols=285 Identities=15% Similarity=0.197 Sum_probs=248.8
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCee
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~ 95 (945)
|...|.+++|+|+|+.++++. .++.+.+|....... ......|...|++++|+|++++|++++ ||.|++|++.++..
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~ 84 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPF-PPDALIGPGIPRHAR-QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN 84 (337)
T ss_dssp EEEECCEEEECSSSCEEECCC-CTTSSSSTTCCSEEE-EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC
T ss_pred cCCceeEEEECCCCCEEEeec-CCCcEeccccCCccc-cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc
Confidence 347799999999999999886 556666666544433 333447999999999999999999998 99999999987653
Q ss_pred eeecc-----cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCe--EEEEEecCCCCEEEEEEccCCCEEEEEeCCCc
Q 002266 96 QTNIT-----RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS--IARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168 (945)
Q Consensus 96 ~~~l~-----~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~--~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~ 168 (945)
...+. .|...|.+++|+|++++|++++.|+.|++||+.++. ....+..|...|.+++|+|++++|++++.||.
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 164 (337)
T 1gxr_A 85 KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164 (337)
T ss_dssp CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCc
Confidence 33222 678899999999999999999999999999999877 66778889999999999999999999999999
Q ss_pred EEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCC
Q 002266 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPN 248 (945)
Q Consensus 169 I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpd 248 (945)
|++||+++++.+..+. .+...+.+++|+|++++|++++.++.|++||+++++.+..+. +...+.+++|+|+
T Consensus 165 v~~~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 165 IAVWDLHNQTLVRQFQ-------GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGYCPT 235 (337)
T ss_dssp EEEEETTTTEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECTT
T ss_pred EEEEeCCCCceeeeee-------cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec--CCCceEEEEECCC
Confidence 9999999998877764 345678999999999999999999999999999998887775 6788999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 249 GKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 249 g~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
+++|++++.++.|++||+.++.......|...|.+++|+|++++|++++.||.|++|++.....
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 9999999999999999999998887788899999999999999999999999999999876553
No 37
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=320.53 Aligned_cols=282 Identities=15% Similarity=0.235 Sum_probs=246.2
Q ss_pred CCCCEEEEEECCCCC-EEEEEEcCCCeEEEEcC----CCCcc-----ccccccc----------cccceEEEEEecCCCE
Q 002266 16 NAASFCSILWDQQAH-HLVTASSSETTISIHDP----LLPSN-----LPKILRH----------HRDGVTALALSPNSTC 75 (945)
Q Consensus 16 h~~~V~svafspdg~-~L~t~g~~dg~V~IWd~----~~~~~-----~~~~l~~----------h~~~V~~la~spdg~~ 75 (945)
|.+.|++++|+|+|+ +|++++ .|+.|+||++ .++.. ....+.. |...|++++|+|++++
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGE-KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEE-TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred ccCceEEEEECCCCCcEEEEec-CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 568999999999999 999887 8999999998 66541 2222222 6789999999999999
Q ss_pred EEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCC--------
Q 002266 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGP-------- 147 (945)
Q Consensus 76 Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~-------- 147 (945)
|++++.||.|++|+ .++.....+..|...|.+++|+|++++|++++.|+.|++||+.++..+..+..+...
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 99999999999999 677778888899999999999999999999999999999999999999888887776
Q ss_pred -------EEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEE
Q 002266 148 -------VTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVM 220 (945)
Q Consensus 148 -------V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~v 220 (945)
+.+++|+|++ .+++++.+|.|++||+.+++.+..+. .+...+.+++|+|++++|++++.++.|++
T Consensus 202 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLI-------GHHGPISVLEFNDTNKLLLSASDDGTLRI 273 (425)
T ss_dssp ----CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEEC-------CCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeec-------cCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 9999999975 58889999999999999887766654 34577899999999999999999999999
Q ss_pred EECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cCCCCeeEEEEecCCCEEEEEEcC
Q 002266 221 YDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KFDDRICCMAWKPIGNALAVIDVM 299 (945)
Q Consensus 221 wD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~V~~la~spdg~~Las~s~D 299 (945)
||+.+++.+..+.. |...|.+++|+|++ +|++++.||.|++||+.++..+... .|...|.+++|+|++++|++++.|
T Consensus 274 ~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 274 WHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp ECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence 99999988888876 88999999999999 9999999999999999998887764 467899999999999999999999
Q ss_pred CeEEEEecCC
Q 002266 300 GKYGVWESVV 309 (945)
Q Consensus 300 G~I~iWd~~~ 309 (945)
|.|++|++..
T Consensus 352 g~i~i~~~~~ 361 (425)
T 1r5m_A 352 GQVNVYDLKK 361 (425)
T ss_dssp SCEEEEECHH
T ss_pred CeEEEEECCC
Confidence 9999999864
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=328.43 Aligned_cols=288 Identities=15% Similarity=0.232 Sum_probs=249.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCC---CccccccccccccceEEEEEecC-CCEEEEEEcCCcEEEEEc
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLL---PSNLPKILRHHRDGVTALALSPN-STCLASGSIDHSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~---~~~~~~~l~~h~~~V~~la~spd-g~~Lasgs~Dg~V~iwdl 90 (945)
+|...|++++|+|++++|++++ .|+.|+||++.. +......+..|...|++++|+|+ +.+|++++.||.|++||+
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~-~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGAL-DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEE-SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred ecCCceEEEEECCCCCeEEEEc-cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 5778999999999999999987 899999999876 22356677889999999999998 899999999999999999
Q ss_pred CCCe------eee---ecccCCCCEEEEEEecC-CCEEEEEECCCcEEEEEcCCCeEEEEEecC------CCCEEEEEEc
Q 002266 91 PGGE------FQT---NITRFTLPIRVLAFNKS-GSMLAAAGDDEGIKLINTIDGSIARVLKGH------KGPVTGLAFD 154 (945)
Q Consensus 91 ~~g~------~~~---~l~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h------~~~V~~lafs 154 (945)
.+++ ... .+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..| ...|.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 8876 322 23568889999999998 789999999999999999999998888876 7899999999
Q ss_pred cCC-CEEEEEeCCC---cEEEEEccCC-eeeeeecccCCCCCCCCCCceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcE
Q 002266 155 PNS-EYLASIDSIG---TVIYWELQSG-RELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 155 pdg-~~Las~s~Dg---~I~iwDl~t~-~~i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
|++ .+|++++.|+ .|++||++++ ..+..+. ..+...+.+++|+| ++++|++++.|+.|++||+.+++.
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~------~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN------QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC------SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee------cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc
Confidence 997 6899999998 9999999886 3333322 04567899999999 999999999999999999999999
Q ss_pred EEeecCCCCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCeeeeec--------------------------------
Q 002266 229 LFSLRGDHVQPICFLSWSPNG-KYMATSSLDRQILIWDVGKKLDIDRQ-------------------------------- 275 (945)
Q Consensus 229 ~~~~~~~h~~~I~~l~fSpdg-~~Lasgs~Dg~I~IWD~~~~~~i~~~-------------------------------- 275 (945)
+..+.. |...|.+++|+|++ .+|++++.||.|+|||+.+.......
T Consensus 298 ~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (416)
T 2pm9_A 298 LSQFPA-RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL 376 (416)
T ss_dssp EEEEEC-SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC
T ss_pred ceeecC-CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc
Confidence 998887 88999999999999 89999999999999999876532211
Q ss_pred ----cCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCC
Q 002266 276 ----KFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 276 ----~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~ 310 (945)
.+...+++++|+|+|++|++++.||.|+||++.++
T Consensus 377 ~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 377 QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 04567889999999999999999999999998753
No 39
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-33 Score=310.74 Aligned_cols=251 Identities=19% Similarity=0.258 Sum_probs=228.6
Q ss_pred ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEc
Q 002266 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132 (945)
Q Consensus 53 ~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~ 132 (945)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.++.....+..|...|.+++|+|++++|++|+.|+.|++|++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 34567899999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCC----eEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCE
Q 002266 133 IDG----SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGET 208 (945)
Q Consensus 133 ~~~----~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~ 208 (945)
.+. .....+.+|.+.|.++.|++++. +++++.|+.|++||+.+++.+..+. .|...+.+++|+|++++
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~ 198 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT-------GHTGDVMSLSLAPDTRL 198 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECTTSSE
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc-------CCCCceEEEEECCCCCE
Confidence 865 35667889999999999998875 8899999999999999998877765 35578999999999999
Q ss_pred EEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCC---CCeeEEE
Q 002266 209 LAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD---DRICCMA 285 (945)
Q Consensus 209 La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~---~~V~~la 285 (945)
|++|+.|+.|++||++++..+..+.+ |...|++++|+|+|++|++|+.||.|+|||+.++..+....+. ..|++++
T Consensus 199 l~sg~~d~~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 277 (340)
T 1got_B 199 FVSGACDASAKLWDVREGMCRQTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277 (340)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred EEEEeCCCcEEEEECCCCeeEEEEcC-CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEE
Confidence 99999999999999999999888887 9999999999999999999999999999999998877665543 4799999
Q ss_pred EecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 286 WKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 286 ~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
|+|++++|++|+.||.|++||......
T Consensus 278 ~s~~g~~l~~g~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 278 FSKSGRLLLAGYDDFNCNVWDALKADR 304 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ECCCCCEEEEECCCCeEEEEEcccCcE
Confidence 999999999999999999999876553
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.9e-33 Score=319.36 Aligned_cols=283 Identities=15% Similarity=0.143 Sum_probs=243.1
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
..+...+|+|++++|++++ .|+.|+|||+.+. .....+..|...|++++|+|++++|++|+.|+.|++||+.+++...
T Consensus 98 ~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGT-TEGDIKVLDSNFN-LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp CEEEEEEECSSSCEEEEEE-TTSCEEEECTTSC-EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE
T ss_pred CceEEEEEecCCCEEEEEE-CCCCEEEEeCCCc-ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce
Confidence 4455667899999999987 8999999998765 4566677999999999999999999999999999999999999888
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEec---CCCCEEEEE---------------------E
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKG---HKGPVTGLA---------------------F 153 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~---h~~~V~~la---------------------f 153 (945)
.+..|...|.+++|+|++.+|++++.|+.|++||+++++.+..+.. |...|.+++ |
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 9999999999999999999999999999999999999998888874 344455544 5
Q ss_pred ccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCC-EEEEEeCCCeEEEEECCCCcE-EEe
Q 002266 154 DPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE-TLAVPGLKNDVVMYDRDTAEK-LFS 231 (945)
Q Consensus 154 spdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~-~La~gs~dg~I~vwD~~t~~~-~~~ 231 (945)
+|++++|++++.||.|++||+++++.+..+.. .+...+.+++|+|++. +|++++.||.|++||+++++. +..
T Consensus 256 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~ 329 (420)
T 3vl1_A 256 GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS------KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGE 329 (420)
T ss_dssp SCTTEEEEEEETTSCEEEEETTTCCEEEEECC------TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred cCCCCEEEEEcCCCeEEEEECCCCceeEEccc------ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhh
Confidence 78999999999999999999999887766532 3457899999999998 999999999999999998754 566
Q ss_pred ecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC----------eeeeeccCCCCeeEEEEecCCC---EEEEEEc
Q 002266 232 LRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK----------LDIDRQKFDDRICCMAWKPIGN---ALAVIDV 298 (945)
Q Consensus 232 ~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~----------~~i~~~~~~~~V~~la~spdg~---~Las~s~ 298 (945)
+...|...|.++.| +++++|++++.||.|+||++... .......+...|.+++|+|++. .|++++.
T Consensus 330 ~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 330 FLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp EEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred hhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence 66557778888855 57889999999999999998763 2223345678899999999999 8888999
Q ss_pred CCeEEEEecCC
Q 002266 299 MGKYGVWESVV 309 (945)
Q Consensus 299 DG~I~iWd~~~ 309 (945)
+|.+.+|++..
T Consensus 409 ~g~~~~~~~~~ 419 (420)
T 3vl1_A 409 NNFCALYNLSN 419 (420)
T ss_dssp TTEEEEEESCC
T ss_pred CceEEEEeccC
Confidence 99999999864
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.7e-34 Score=329.06 Aligned_cols=293 Identities=18% Similarity=0.242 Sum_probs=233.9
Q ss_pred cccccCCCCCEEEEEECCC-CCEEEEEEcCCCeEEEEcCCCCcc-ccccccccccceEEEEEec-CCCEEEEEEcCCcEE
Q 002266 10 EAHKCGNAASFCSILWDQQ-AHHLVTASSSETTISIHDPLLPSN-LPKILRHHRDGVTALALSP-NSTCLASGSIDHSVK 86 (945)
Q Consensus 10 ~aH~~gh~~~V~svafspd-g~~L~t~g~~dg~V~IWd~~~~~~-~~~~l~~h~~~V~~la~sp-dg~~Lasgs~Dg~V~ 86 (945)
.... +|...|+||+|+|. +.+||+|+ .||.|+|||+.+... ....+.+|.+.|++|+|+| ++.+|++|+.||+|+
T Consensus 113 ~~~~-~~~~~V~~l~~~P~~~~~lasGs-~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 113 QKAA-PFDRRATSLAWHPTHPSTVAVGS-KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp CEEE-ECSSCEEEEEECSSCTTCEEEEE-TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ccCC-CCCCCEEEEEEeCCCCCEEEEEe-CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 3344 67789999999995 45677765 999999999876643 2334568999999999998 789999999999999
Q ss_pred EEEcCCCeeeeeccc--CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCC-EEEEE
Q 002266 87 LYKFPGGEFQTNITR--FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE-YLASI 163 (945)
Q Consensus 87 iwdl~~g~~~~~l~~--~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~-~Las~ 163 (945)
+||+.++........ +...+.+++|+|++.+|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|+++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEe
Confidence 999987654433332 34467899999999999999999999999986 455677889999999999999876 78899
Q ss_pred eCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCC------
Q 002266 164 DSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHV------ 237 (945)
Q Consensus 164 s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~------ 237 (945)
+.|+.|++||+++......+.. ...|...|++++|+|+|++|++++.|+.|++||+.++.....+.. |.
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~----~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~-~~~~~~~~ 344 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLY----SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP-HPHRHFQH 344 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSB----CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC-CCCCCCSS
T ss_pred cCcceeeEEecccccccceEEE----eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec-cccccccc
Confidence 9999999999988765443321 224667899999999999999999999999999999887766654 22
Q ss_pred CCeEEEEEcCCCCEEEEEEC------------CCeEEEEECCCCeeeeec--cCCCCeeEE-EEecCCCEEEEEEcCCeE
Q 002266 238 QPICFLSWSPNGKYMATSSL------------DRQILIWDVGKKLDIDRQ--KFDDRICCM-AWKPIGNALAVIDVMGKY 302 (945)
Q Consensus 238 ~~I~~l~fSpdg~~Lasgs~------------Dg~I~IWD~~~~~~i~~~--~~~~~V~~l-a~spdg~~Las~s~DG~I 302 (945)
..+..+.|+|++.++++++. ++.|+|||..++..+... .|...|.++ +|+|+|++|++|+ |+.|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i 423 (435)
T 4e54_B 345 LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHI 423 (435)
T ss_dssp SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEE
T ss_pred ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcE
Confidence 12345678888887777642 357999999999887763 467778887 6999999998875 8899
Q ss_pred EEEecCCCC
Q 002266 303 GVWESVVPS 311 (945)
Q Consensus 303 ~iWd~~~~~ 311 (945)
+||++..+.
T Consensus 424 ~iW~~~~gk 432 (435)
T 4e54_B 424 LIWSQQEAR 432 (435)
T ss_dssp EECCCC---
T ss_pred EEEECCcCe
Confidence 999987654
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-34 Score=323.29 Aligned_cols=294 Identities=17% Similarity=0.287 Sum_probs=249.6
Q ss_pred CCEEEEEECCCCC-EEEEEE---------cCCCeEEEEcCCCCccc-cccccccccceEEEEEecCCCEEEEEEcCCcEE
Q 002266 18 ASFCSILWDQQAH-HLVTAS---------SSETTISIHDPLLPSNL-PKILRHHRDGVTALALSPNSTCLASGSIDHSVK 86 (945)
Q Consensus 18 ~~V~svafspdg~-~L~t~g---------~~dg~V~IWd~~~~~~~-~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~ 86 (945)
..|.+++|+|+|+ +|+++. +.|+.|+||++.+.... ......|...|++++|+|++.+|++|+.||.|+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 4588999999998 666551 48999999998876421 222335889999999999999999999999999
Q ss_pred EEEcCC----CeeeeecccCCCCEEEEEEecC-CCEEEEEECCCcEEEEEcCCCe------EEEE---EecCCCCEEEEE
Q 002266 87 LYKFPG----GEFQTNITRFTLPIRVLAFNKS-GSMLAAAGDDEGIKLINTIDGS------IARV---LKGHKGPVTGLA 152 (945)
Q Consensus 87 iwdl~~----g~~~~~l~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~iwd~~~~~------~~~~---l~~h~~~V~~la 152 (945)
+|++.+ ......+..|...|.+++|+|+ +.+|++++.|+.|++||+.++. .... +..|...|.+++
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 172 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA 172 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE
T ss_pred EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEE
Confidence 999987 3477788889999999999998 8999999999999999998876 3322 367899999999
Q ss_pred EccC-CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC-CEEEEEeCCC---eEEEEECCCC-
Q 002266 153 FDPN-SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG-ETLAVPGLKN---DVVMYDRDTA- 226 (945)
Q Consensus 153 fspd-g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg-~~La~gs~dg---~I~vwD~~t~- 226 (945)
|+|+ +.+|++++.||.|++||+++++.+..+..... ...+...+.+++|+|++ .+|++++.++ .|++||++++
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP-NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC-SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc-ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 9998 78999999999999999999988877754321 12336789999999987 6899999998 9999999987
Q ss_pred cEEEeecCCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCC-CEEEEEEcCCeEE
Q 002266 227 EKLFSLRGDHVQPICFLSWSP-NGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIG-NALAVIDVMGKYG 303 (945)
Q Consensus 227 ~~~~~~~~~h~~~I~~l~fSp-dg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg-~~Las~s~DG~I~ 303 (945)
..+..+...|...|.+++|+| ++.+|++++.||.|+|||+.+++.+.. ..|...|++++|+|++ .+|++++.||.|+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 455556513889999999999 999999999999999999999888776 4678899999999999 8999999999999
Q ss_pred EEecCCCCC
Q 002266 304 VWESVVPSS 312 (945)
Q Consensus 304 iWd~~~~~~ 312 (945)
+|++.....
T Consensus 332 iw~~~~~~~ 340 (416)
T 2pm9_A 332 VQTLQNLTN 340 (416)
T ss_dssp EEESCCCCC
T ss_pred EEEccCCCC
Confidence 999976654
No 43
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=326.24 Aligned_cols=284 Identities=14% Similarity=0.156 Sum_probs=237.6
Q ss_pred CCCCCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCC---Ccccc-ccccccccceEEEEEecCCCEEEEEEcCCcEEEEE
Q 002266 15 GNAASFCSILWDQ-QAHHLVTASSSETTISIHDPLL---PSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 15 gh~~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~---~~~~~-~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd 89 (945)
+|.+.|++++|+| ++++|++++ .||.|+|||+.+ ..... .....|...|++++|+|++.+|++|+.||.|++||
T Consensus 61 ~h~~~V~~~~~s~~~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 61 NEPNSITSSAVSPGETPYLITGS-DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK 139 (437)
T ss_dssp TTTSCEEEEEEECSSSCEEEEEE-TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCCceEEEEECCCCCCEEEEec-CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 6779999999999 999999987 999999999765 22111 22226899999999999999999999999999999
Q ss_pred cC---CCeeeeecc----------c--CCCCEEEEE--EecCCCEEEEEECCCcEEEEEcCCCeEEEEEec--CCCCEEE
Q 002266 90 FP---GGEFQTNIT----------R--FTLPIRVLA--FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKG--HKGPVTG 150 (945)
Q Consensus 90 l~---~g~~~~~l~----------~--~~~~V~~l~--fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~--h~~~V~~ 150 (945)
+. +++....+. . +...+.++. +++++.+|++|+.|+.|++||+++++.+..+.. |...|++
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~ 219 (437)
T 3gre_A 140 VNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSS 219 (437)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEE
T ss_pred eccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEE
Confidence 84 443332222 1 455677777 557899999999999999999999999999988 8999999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC----CCCEEEEEeCCCeEEEEECCCC
Q 002266 151 LAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP----DGETLAVPGLKNDVVMYDRDTA 226 (945)
Q Consensus 151 lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp----dg~~La~gs~dg~I~vwD~~t~ 226 (945)
++|+|++.+|++++.||.|++||+++++.+..+.. .+...|.+++|+| ++.+|++++.|+.|++||+.++
T Consensus 220 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 220 ICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF------GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC------TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec------CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 99999999999999999999999999988877642 2345788996665 6789999999999999999999
Q ss_pred cEEEeecCC-------------------------CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc-----
Q 002266 227 EKLFSLRGD-------------------------HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK----- 276 (945)
Q Consensus 227 ~~~~~~~~~-------------------------h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~----- 276 (945)
+.+..+.+. |...|++++|+ ++++|++|+.||.|++||+.+++.+....
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 372 (437)
T 3gre_A 294 HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRF 372 (437)
T ss_dssp EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--C
T ss_pred cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEeccccc
Confidence 887776531 55668999999 78999999999999999999877554322
Q ss_pred ---------------------------------CCCCeeEEEEecC--CCEEEEEEcCCeEEEEe
Q 002266 277 ---------------------------------FDDRICCMAWKPI--GNALAVIDVMGKYGVWE 306 (945)
Q Consensus 277 ---------------------------------~~~~V~~la~spd--g~~Las~s~DG~I~iWd 306 (945)
|...|++++|+++ +.+|++++.||.|+||+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 373 SDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred CceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 7889999999998 77999999999999995
No 44
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.3e-30 Score=313.03 Aligned_cols=283 Identities=16% Similarity=0.219 Sum_probs=251.4
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc---cccccccccccc-eEEEEEec--CCCEEEEEEcCCcEEEE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS---NLPKILRHHRDG-VTALALSP--NSTCLASGSIDHSVKLY 88 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~---~~~~~l~~h~~~-V~~la~sp--dg~~Lasgs~Dg~V~iw 88 (945)
.|.+.|++++|+|+|++|++++ ++.|+||++.++. .....+.+|... |++++|+| ++++|++|+.||.|++|
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 6779999999999999999986 7899999988651 345677889999 99999999 99999999999999999
Q ss_pred EcCCC--------eeeeecccCCCCEEEEEEecCCCEEEEEECC----CcEEEEEcCCCeEEEEEecCCCCEEEEEEccC
Q 002266 89 KFPGG--------EFQTNITRFTLPIRVLAFNKSGSMLAAAGDD----EGIKLINTIDGSIARVLKGHKGPVTGLAFDPN 156 (945)
Q Consensus 89 dl~~g--------~~~~~l~~~~~~V~~l~fspdg~~Lasgs~D----g~I~iwd~~~~~~~~~l~~h~~~V~~lafspd 156 (945)
++.++ .....+..|..+|.+++|+|++++|++++.+ +.|++|| .+.....+.+|...|.+++|+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSS
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCC
Confidence 99754 6667778899999999999999999999987 6788887 67788889999999999999999
Q ss_pred CC-EEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCC---CceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEe
Q 002266 157 SE-YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPS---SMNVLSWSPD-GETLAVPGLKNDVVMYDRDTAEKLFS 231 (945)
Q Consensus 157 g~-~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~---~i~~l~~spd-g~~La~gs~dg~I~vwD~~t~~~~~~ 231 (945)
+. +|++++.||.|++||+.+++.+..+.. +.. .+.+++|+|+ +++|++++.++.|++||+.+++.+..
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASDRT-------HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEECS-------SSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeeecc-------cCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 98 899999999999999999888777653 334 7999999999 99999999999999999999999988
Q ss_pred ecC---CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCC-----CCeeEEEEecCCCEEEEEEcCCeEE
Q 002266 232 LRG---DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD-----DRICCMAWKPIGNALAVIDVMGKYG 303 (945)
Q Consensus 232 ~~~---~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~-----~~V~~la~spdg~~Las~s~DG~I~ 303 (945)
+.. .|...|.+++|+ ++.+|++++.||.|++||+.+++.+...... ..+.++.|. ++.+|++++.+|.|+
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~ 322 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLN 322 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEE
T ss_pred ecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEE
Confidence 832 489999999999 9999999999999999999999888775443 678888886 888999999999999
Q ss_pred EEecCCC
Q 002266 304 VWESVVP 310 (945)
Q Consensus 304 iWd~~~~ 310 (945)
+|++...
T Consensus 323 ~~d~~~~ 329 (615)
T 1pgu_A 323 FYELGHD 329 (615)
T ss_dssp EEETTEE
T ss_pred EEECCCC
Confidence 9998653
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-32 Score=315.06 Aligned_cols=281 Identities=17% Similarity=0.272 Sum_probs=239.9
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeec
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI 99 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l 99 (945)
+.+++|++ ..+++++ .|+.|+||+..++.........|...|++++|+|++.+|++|+.||.|++|++.+++....+
T Consensus 96 ~~~~~~s~--~~l~~~~-~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 172 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVA-LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM 172 (401)
T ss_dssp CBCEEECT--TSEEEEE-ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEeecC--CCEEEEE-CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe
Confidence 45567765 4577766 89999999998875433333348899999999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC-CCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCe
Q 002266 100 TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI-DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178 (945)
Q Consensus 100 ~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~-~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~ 178 (945)
..|...|.+++| ++.+|++|+.||.|++||++ .......+.+|...|.+++|+|++.+|++++.||.|++||++++.
T Consensus 173 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 173 AGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS
T ss_pred cCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC
Confidence 999999999999 46799999999999999998 466788889999999999999999999999999999999999988
Q ss_pred eeeeecccCCCCCCCCCCceEEEEcCCCC-EEEEEe--CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEE
Q 002266 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGE-TLAVPG--LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATS 255 (945)
Q Consensus 179 ~i~~~~~~~~~~~~~~~~i~~l~~spdg~-~La~gs--~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasg 255 (945)
.+..+. .+...+.+++|+|++. ++++++ .|+.|++||+.+++.+..+. +...|.+++|+|++++|+++
T Consensus 251 ~~~~~~-------~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 251 PKFTKT-------NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp EEEEEC-------CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEE
T ss_pred ccEEec-------CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEE
Confidence 776664 3457789999999764 555554 69999999999999888886 56789999999999999995
Q ss_pred E--CCCeEEEEECCCCeeeee---ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCCCC
Q 002266 256 S--LDRQILIWDVGKKLDIDR---QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMK 314 (945)
Q Consensus 256 s--~Dg~I~IWD~~~~~~i~~---~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~~~ 314 (945)
+ .||.|+|||+.++..... ..|...|.+++|+|++++|++++.||.|++|++..+..+.
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred eecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 4 899999999998665543 4678899999999999999999999999999998776543
No 46
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=321.89 Aligned_cols=288 Identities=17% Similarity=0.236 Sum_probs=233.1
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcc----------ccccccccc------------cceEEEEEecC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSN----------LPKILRHHR------------DGVTALALSPN 72 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~----------~~~~l~~h~------------~~V~~la~spd 72 (945)
.|.+.|++++|+|+|++|++++ .||.|+||++.+... ....+.+|. ..|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGD-KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEE-TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEc-CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 3568999999999999999987 999999999876532 355677888 88999999999
Q ss_pred C--CEEEEEEcCCcEEEEEcCCCeee----------------------------------------eecccCCCCEEEEE
Q 002266 73 S--TCLASGSIDHSVKLYKFPGGEFQ----------------------------------------TNITRFTLPIRVLA 110 (945)
Q Consensus 73 g--~~Lasgs~Dg~V~iwdl~~g~~~----------------------------------------~~l~~~~~~V~~l~ 110 (945)
+ .+|++++.|+.|++|++.++... .....|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 79999999999999998764432 11356889999999
Q ss_pred EecCCCEEEEEECCCcEEEEEcCCC-eEEEE-------EecCCCCEEEEEEccCC-CEEEEEeCCCcEEEEEccCCee--
Q 002266 111 FNKSGSMLAAAGDDEGIKLINTIDG-SIARV-------LKGHKGPVTGLAFDPNS-EYLASIDSIGTVIYWELQSGRE-- 179 (945)
Q Consensus 111 fspdg~~Lasgs~Dg~I~iwd~~~~-~~~~~-------l~~h~~~V~~lafspdg-~~Las~s~Dg~I~iwDl~t~~~-- 179 (945)
|+|++++|++| .|+.|++||+... ..... +.+|...|.+++|+|++ .+|++++.||.|++||++++..
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99999999998 8999999999844 33332 45899999999999998 9999999999999999998875
Q ss_pred --eeeecccCCC-----CCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEeecCCCCCC------------
Q 002266 180 --LHNLKRVAPD-----IGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT-AEKLFSLRGDHVQP------------ 239 (945)
Q Consensus 180 --i~~~~~~~~~-----~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t-~~~~~~~~~~h~~~------------ 239 (945)
+..+..+... ...+...+.+++|+|+|++|++++. +.|++||+++ ++.+..+.. |...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV-HEYLRSKLCSLYENDC 341 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES-CGGGTTTHHHHHHTSG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec-cccccccccccccccc
Confidence 4444432100 0001137999999999999999998 9999999997 777777765 5321
Q ss_pred ---eEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec---------------------------------cCCCCeeE
Q 002266 240 ---ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ---------------------------------KFDDRICC 283 (945)
Q Consensus 240 ---I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~---------------------------------~~~~~V~~ 283 (945)
+..++|+|+|++|++|+.||.|+|||+.+++.+... .+...|..
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 334999999999999999999999999988765422 33467899
Q ss_pred EEEecCCCEEEEEEcCCeEEEEec
Q 002266 284 MAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 284 la~spdg~~Las~s~DG~I~iWd~ 307 (945)
++|+|+++.||+++.++ +++|..
T Consensus 422 ~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 422 TAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEECSSSSEEEEECSSC-EEEEEC
T ss_pred EEECCCCCEEEEEecce-eeeecc
Confidence 99999999999998876 777764
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.4e-32 Score=342.57 Aligned_cols=296 Identities=18% Similarity=0.231 Sum_probs=261.0
Q ss_pred CCccccccccccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE
Q 002266 1 MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS 80 (945)
Q Consensus 1 Mk~~~i~~~~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs 80 (945)
|+.+..+...+|. +.|++++|+|+|++|++++ .+|.|+|||..++ .....+..|...|++++|+|++++|++|+
T Consensus 1 m~l~~~~~~~~h~----~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 1 MKLDIKKTFSNRS----DRVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp -CCCCEEEEEEEC----SCEEEEEECSSSSEEEEEE-TTSEEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred CCcccceeeecCC----CceEEEEECCCCCEEEEEe-CCCEEEEEECCCC-ceEEEEecCCCcEEEEEEeCCCCEEEEEe
Confidence 4555555555555 8999999999999999987 8999999998876 45667788999999999999999999999
Q ss_pred cCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC-eEEEEEecCCCCEEEEEEcc-CCC
Q 002266 81 IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG-SIARVLKGHKGPVTGLAFDP-NSE 158 (945)
Q Consensus 81 ~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~-~~~~~l~~h~~~V~~lafsp-dg~ 158 (945)
.||.|++|++.+++....+..|...|++++|+|++.+|++++.||.|++||+.++ .....+.+|...|.+++|+| ++.
T Consensus 75 ~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999999999999987 67788889999999999999 889
Q ss_pred EEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEeecCCC
Q 002266 159 YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP--DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH 236 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp--dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h 236 (945)
+|++++.||.|++||+.++.....+.. .+...+.+++|+| ++.+|++++.+|.|++||+.+++.+..+.+ |
T Consensus 155 ~l~~~~~dg~v~vwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~ 227 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTT------GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-H 227 (814)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEEC------CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-C
T ss_pred EEEEEeCCCeEEEEECCCCcceeEEec------CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-C
Confidence 999999999999999988776665543 2336788999999 999999999999999999999999888876 8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cCCCCeeEEEEecCCCE-EEEEEcCCeEEEEecCC
Q 002266 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KFDDRICCMAWKPIGNA-LAVIDVMGKYGVWESVV 309 (945)
Q Consensus 237 ~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~V~~la~spdg~~-Las~s~DG~I~iWd~~~ 309 (945)
...|.+++|+|+|.+|++++.||.|++||+.++..+... .+...+++++|+|++.. +++++.++.+.+|++..
T Consensus 228 ~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 899999999999999999999999999999998877764 45688999999999873 35555677789998753
No 48
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=307.75 Aligned_cols=245 Identities=19% Similarity=0.201 Sum_probs=208.5
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccc---ccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLP---KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~---~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~ 92 (945)
|...|++++|+|++ .|++++ .||+|+|||+.++.... ....+|.+.|++++|+|+|++|++|+.|++|++||+.+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s-~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVAS-DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEE-TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCCCEEEEEEeCCC-eEEEEE-CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 45779999999986 566765 89999999998764322 23457999999999999999999999999999999999
Q ss_pred CeeeeecccCCCCEEEEEEecCC-CEEEEEECCCcEEEEEcCCCeEEEEEe--cCCCCEEEEEEccC-CCEEEEEeCCCc
Q 002266 93 GEFQTNITRFTLPIRVLAFNKSG-SMLAAAGDDEGIKLINTIDGSIARVLK--GHKGPVTGLAFDPN-SEYLASIDSIGT 168 (945)
Q Consensus 93 g~~~~~l~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~iwd~~~~~~~~~l~--~h~~~V~~lafspd-g~~Las~s~Dg~ 168 (945)
++.+..+.+|...|.+++|++++ .+|++|+.|+.|++||+++++....+. .|...+.+++|+|+ +.+|++++.||.
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence 99999999999999999999987 478999999999999999998877764 45667999999995 568899999999
Q ss_pred EEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcC
Q 002266 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG-ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP 247 (945)
Q Consensus 169 I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg-~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSp 247 (945)
|++||+++++.+..+. .|...|++++|+|+| ++|++|+.|+.|+|||+.+++.. .+.+ |...|++++|+|
T Consensus 239 v~~wd~~~~~~~~~~~-------~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~-H~~~V~~v~~sp 309 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSSA-------VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQA-HRDFVRDATWSP 309 (344)
T ss_dssp EEEEESCC--CCEEEE-------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECC-CSSCEEEEEECS
T ss_pred EEEEECCCCcEEEEEc-------CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcC-CCCCEEEEEEeC
Confidence 9999999998887775 456789999999987 57899999999999999988754 4555 999999999999
Q ss_pred CCC-EEEEEECCCeEEEEECCCCee
Q 002266 248 NGK-YMATSSLDRQILIWDVGKKLD 271 (945)
Q Consensus 248 dg~-~Lasgs~Dg~I~IWD~~~~~~ 271 (945)
++. +|++++.||+|++|++.+...
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCeEEEEEcCCCeEEEEECCCCCC
Confidence 886 577999999999999987543
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.4e-33 Score=313.74 Aligned_cols=281 Identities=14% Similarity=0.127 Sum_probs=223.4
Q ss_pred CCEEEEEECCCCCEEEEEEcC------CCeEEEEcCCCCcccc---------ccccccccceEEEEEecCCCEEEEEE--
Q 002266 18 ASFCSILWDQQAHHLVTASSS------ETTISIHDPLLPSNLP---------KILRHHRDGVTALALSPNSTCLASGS-- 80 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~------dg~V~IWd~~~~~~~~---------~~l~~h~~~V~~la~spdg~~Lasgs-- 80 (945)
-+|+|++|+|+|++|+++|+. ++.|+||++....... ..+..|...|.+++++ +..+++|+
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 579999999999999998732 2369999976543211 1345677888888665 55677664
Q ss_pred ---------cCCcEEEEEcCCCeee----eec-----ccCCCCEEEEEEecCCCEEEEEE--CCCcEEEEEcCCCeEEEE
Q 002266 81 ---------IDHSVKLYKFPGGEFQ----TNI-----TRFTLPIRVLAFNKSGSMLAAAG--DDEGIKLINTIDGSIARV 140 (945)
Q Consensus 81 ---------~Dg~V~iwdl~~g~~~----~~l-----~~~~~~V~~l~fspdg~~Lasgs--~Dg~I~iwd~~~~~~~~~ 140 (945)
.|+.+++|++...... ... ..+...+++++|+|||+++++++ .|+.|+|||+.+++.+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 4678999998654211 111 12344689999999999987665 689999999999998888
Q ss_pred EecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC----
Q 002266 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN---- 216 (945)
Q Consensus 141 l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg---- 216 (945)
+. |...|.+++|+|+|++|++++. +.+++|+..++..+..... ..+...+.+++|+|+|+++++++.++
T Consensus 173 ~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 173 IE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTD-----FDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp EE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECC-----CCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred eC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeec-----CCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 76 7788999999999999999885 5577777777765543321 23556789999999999999998877
Q ss_pred eEEEEECCCCcE----EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee--ccCCCCeeEEEEecCC
Q 002266 217 DVVMYDRDTAEK----LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR--QKFDDRICCMAWKPIG 290 (945)
Q Consensus 217 ~I~vwD~~t~~~----~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~--~~~~~~V~~la~spdg 290 (945)
.+++|++..+.. ...+.+ |...|++++|+|+|++||+|+.|+.|+|||+.+++++.. ..|...|++++|+|+|
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS
T ss_pred EEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC
Confidence 688899876653 234444 888999999999999999999999999999999998876 4689999999999999
Q ss_pred CEEEEEEcCCeEEEEecC
Q 002266 291 NALAVIDVMGKYGVWESV 308 (945)
Q Consensus 291 ~~Las~s~DG~I~iWd~~ 308 (945)
++||+++.|++|+||++.
T Consensus 325 ~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 325 TYVASVSAANTIHIIKLP 342 (365)
T ss_dssp CEEEEEETTSEEEEEECC
T ss_pred CEEEEEeCCCeEEEEEcC
Confidence 999999999999999984
No 50
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-31 Score=302.88 Aligned_cols=301 Identities=14% Similarity=0.209 Sum_probs=243.9
Q ss_pred cccccCCCCCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCCCccccccc------------cccccceEEEEEec-CCCE
Q 002266 10 EAHKCGNAASFCSILWDQ-QAHHLVTASSSETTISIHDPLLPSNLPKIL------------RHHRDGVTALALSP-NSTC 75 (945)
Q Consensus 10 ~aH~~gh~~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l------------~~h~~~V~~la~sp-dg~~ 75 (945)
.... +|.+.|++++|+| ++++|++++ .||.|+|||+.+........ .+|...|.+++|+| ++.+
T Consensus 37 ~~~~-~h~~~v~~~~~s~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 37 DVER-IHGGGINTLDIEPVEGRYMLSGG-SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp EECC-CCSSCEEEEEECTTTCCEEEEEE-TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeee-ccCCcEEEEEEecCCCCEEEEEc-CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3344 6779999999999 999999987 89999999988764322221 25899999999999 7789
Q ss_pred EEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecC---CCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEE
Q 002266 76 LASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKS---GSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152 (945)
Q Consensus 76 Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspd---g~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~la 152 (945)
|++++.||.|++|++.+++....+. +...+.++.|++. +.++++++.++.|++||+.++..+..+..|...|.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 9999999999999999998877665 7788999999984 45999999999999999999999999999999999999
Q ss_pred EccCCC-EEEEEeCCCcEEEEEccCCe-eeeeeccc--------CCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEE
Q 002266 153 FDPNSE-YLASIDSIGTVIYWELQSGR-ELHNLKRV--------APDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYD 222 (945)
Q Consensus 153 fspdg~-~Las~s~Dg~I~iwDl~t~~-~i~~~~~~--------~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD 222 (945)
|+|++. +|++++.||.|++||++++. .+..+... ......+...+.+++|+|++++|++++.|+.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 999998 58999999999999998765 33333211 111235667899999999999999999999999999
Q ss_pred CCCCcEEEeecCC----CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cCCCCeeEEEEecCCCEEEEEE
Q 002266 223 RDTAEKLFSLRGD----HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KFDDRICCMAWKPIGNALAVID 297 (945)
Q Consensus 223 ~~t~~~~~~~~~~----h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~V~~la~spdg~~Las~s 297 (945)
+.+++....+... ....+........+..+++++.++.|++||+.++..+... .|...|++++|+|++++|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC
Confidence 9988765544321 1122222223334566777778999999999999888774 4888999999999999999999
Q ss_pred cCCeEEEEecCCCCCC
Q 002266 298 VMGKYGVWESVVPSSM 313 (945)
Q Consensus 298 ~DG~I~iWd~~~~~~~ 313 (945)
.||.|++|++.....+
T Consensus 354 ~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 354 RDCNILAWVPSLYEPV 369 (408)
T ss_dssp TTSCEEEEEECC----
T ss_pred CCCeEEEEeCCCCCcc
Confidence 9999999999876543
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-31 Score=309.72 Aligned_cols=282 Identities=17% Similarity=0.278 Sum_probs=250.6
Q ss_pred CCCCC-EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC
Q 002266 15 GNAAS-FCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 15 gh~~~-V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g 93 (945)
+|... ++++.+ ++++|++++ .||.|++||+.++ .....+.+|.+.|++++|++++ +|++|+.||+|++||+.++
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs-~dg~i~vwd~~~~-~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGA-DDKMIRVYDSINK-KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG 193 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEE-TTSCEEEEETTTT-EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT
T ss_pred CCCCCcEEEEEE--CCCEEEEEc-CCCcEEEEECCCC-cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC
Confidence 66666 566666 577888886 9999999999876 4567788999999999999988 9999999999999999999
Q ss_pred eeeeecccCCCCEEEEEEe--cCCCEEEEEECCCcEEEEEcCCCe-----------------------EEEEEecCCCCE
Q 002266 94 EFQTNITRFTLPIRVLAFN--KSGSMLAAAGDDEGIKLINTIDGS-----------------------IARVLKGHKGPV 148 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fs--pdg~~Lasgs~Dg~I~iwd~~~~~-----------------------~~~~l~~h~~~V 148 (945)
+....+..|...|.+++|+ +++.+|++|+.|+.|++||+.++. ....+.+|...|
T Consensus 194 ~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 273 (464)
T 3v7d_B 194 CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV 273 (464)
T ss_dssp EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE
T ss_pred cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE
Confidence 9999999999999999999 578999999999999999998765 255677899999
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Q 002266 149 TGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 149 ~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
.++ ++++.+|++++.||.|++||+++++.+..+. .+...+.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 274 ~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 274 RTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-------GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 344 (464)
T ss_dssp EEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred EEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 887 5678999999999999999999998887765 3457799999999999999999999999999999999
Q ss_pred EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 229 ~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
+..+.+ |...|.+++|+ +.+|++++.||.|++||+.++.......+...+..++|++++++|++++ ||.|++||+.
T Consensus 345 ~~~~~~-h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 345 MYTLQG-HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp EEEECC-CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred EEEEeC-CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 999987 99999999997 5899999999999999999988777777788899999999999999988 8999999998
Q ss_pred CCCCCC
Q 002266 309 VPSSMK 314 (945)
Q Consensus 309 ~~~~~~ 314 (945)
.+..+.
T Consensus 421 ~g~~~~ 426 (464)
T 3v7d_B 421 SGKLVH 426 (464)
T ss_dssp TCCEEE
T ss_pred CCcEEe
Confidence 776543
No 52
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5e-32 Score=297.27 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=212.1
Q ss_pred ccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC--CeeeeecccCCCCEEEEEEec--CCCEEEEEECCCcEEEE
Q 002266 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG--GEFQTNITRFTLPIRVLAFNK--SGSMLAAAGDDEGIKLI 130 (945)
Q Consensus 55 ~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~--g~~~~~l~~~~~~V~~l~fsp--dg~~Lasgs~Dg~I~iw 130 (945)
..+.+|.+.|++++|+|+|++|++|+.|++|+||++.. ++....+.+|..+|.+++|++ ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 35678999999999999999999999999999999974 356778889999999999986 38999999999999999
Q ss_pred EcCCCe--EEEEEecCCCCEEEEEEccC--CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC-
Q 002266 131 NTIDGS--IARVLKGHKGPVTGLAFDPN--SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD- 205 (945)
Q Consensus 131 d~~~~~--~~~~l~~h~~~V~~lafspd--g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd- 205 (945)
|+.++. .+..+.+|...|.+++|+|+ +.+|++++.||.|++||++++...... ....|...+.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~-----~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI-----IIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE-----EEECCSSCEEEEEECCCC
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee-----eeecccCccceEeecCCc
Confidence 998874 56677889999999999997 889999999999999999876321111 11245678999999996
Q ss_pred ------------CCEEEEEeCCCeEEEEECCCCc----EEEeecCCCCCCeEEEEEcCCC---CEEEEEECCCeEEEEEC
Q 002266 206 ------------GETLAVPGLKNDVVMYDRDTAE----KLFSLRGDHVQPICFLSWSPNG---KYMATSSLDRQILIWDV 266 (945)
Q Consensus 206 ------------g~~La~gs~dg~I~vwD~~t~~----~~~~~~~~h~~~I~~l~fSpdg---~~Lasgs~Dg~I~IWD~ 266 (945)
+++|++|+.|+.|++||++++. ....+.+ |...|.+++|+|++ .+||+++.|+.|+|||+
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC-CCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 5799999999999999998765 4556666 99999999999984 89999999999999999
Q ss_pred CCCe------eeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 267 GKKL------DIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 267 ~~~~------~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
.+.. .+....|...|.+++|+|++++|++++.||.|++|+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 7642 111135678899999999999999999999999999753
No 53
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.8e-32 Score=303.00 Aligned_cols=252 Identities=16% Similarity=0.219 Sum_probs=226.7
Q ss_pred ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEc
Q 002266 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132 (945)
Q Consensus 53 ~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~ 132 (945)
....+.+|...|++++|+|++++|++|+.||+|++||..++.....+..+...|.+++|+|+|.+|++|+.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 34567899999999999999999999999999999999999888888888899999999999999999999999999998
Q ss_pred CCC------eEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC--
Q 002266 133 IDG------SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP-- 204 (945)
Q Consensus 133 ~~~------~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp-- 204 (945)
... .....+..|...|.+++|+|++..|++++.||+|++||+.+++.+..+. .|...+.+++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-------GHGADVLCLDLAPSE 208 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECCCS
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-------CCCCCeEEEEEEeCC
Confidence 643 3456677899999999999999999999999999999999998887775 3456788999988
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccC---CCCe
Q 002266 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF---DDRI 281 (945)
Q Consensus 205 dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~---~~~V 281 (945)
+|++|++|+.|+.|++||+++++.+..+.. |...|.+++|+|++.+|++++.|+.|+|||+.....+..... ...+
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGA 287 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccce
Confidence 578999999999999999999999888876 999999999999999999999999999999998877665432 3478
Q ss_pred eEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 282 CCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 282 ~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
.+++|+|++++|++++.||.|++||+..+..
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~ 318 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 318 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCce
Confidence 9999999999999999999999999876653
No 54
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.2e-31 Score=290.88 Aligned_cols=253 Identities=24% Similarity=0.410 Sum_probs=226.7
Q ss_pred ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEc
Q 002266 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132 (945)
Q Consensus 53 ~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~ 132 (945)
....+.+|...|++++|+|++++|++|+.||.|++|++.+++....+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 44567889999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE
Q 002266 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212 (945)
Q Consensus 133 ~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g 212 (945)
.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+. .+...+.+++|+|++++|+++
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-------AHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-------CCCCcEEEEEEcCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999988777664 345678999999999999999
Q ss_pred eCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cCCCCe--eEEEE-ec
Q 002266 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KFDDRI--CCMAW-KP 288 (945)
Q Consensus 213 s~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~V--~~la~-sp 288 (945)
+.|+.|++||+++++.+..+...+...+..++|+|++++|++++.||.|+|||+.+++.+... .|...+ ....| .+
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 999999999999999888876657788999999999999999999999999999999877664 343332 22334 46
Q ss_pred CCCEEEEEEcCCeEEEEecCCCCC
Q 002266 289 IGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 289 dg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
++.+|++++.||.|++||+.....
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCCE
T ss_pred CCcEEEEECCCCEEEEEECCCchh
Confidence 788999999999999999876654
No 55
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5e-32 Score=300.61 Aligned_cols=278 Identities=16% Similarity=0.152 Sum_probs=236.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc--cccccccccccceEEEEEecCCC-EEEEEEcCCcEEEEEc-
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS--NLPKILRHHRDGVTALALSPNST-CLASGSIDHSVKLYKF- 90 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~--~~~~~l~~h~~~V~~la~spdg~-~Lasgs~Dg~V~iwdl- 90 (945)
+|.+.|++++|+|++++|++++ .|+.|+||++.... .....+..|...|++++|+|++. +|++|+.||.|++|++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 4558999999999999999987 89999999987653 12345568999999999999999 9999999999999999
Q ss_pred CCCeeeeeccc--CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCC---------CeEEEEEecCCCCEEEEEEccCCCE
Q 002266 91 PGGEFQTNITR--FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID---------GSIARVLKGHKGPVTGLAFDPNSEY 159 (945)
Q Consensus 91 ~~g~~~~~l~~--~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~---------~~~~~~l~~h~~~V~~lafspdg~~ 159 (945)
.+++. ..+.. |...|.+++|+| +.+|++++.|+.|++||+++ ++.+..+. |...|.+++|+|++
T Consensus 88 ~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-- 162 (342)
T 1yfq_A 88 GSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-- 162 (342)
T ss_dssp SSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--
T ss_pred cCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--
Confidence 87764 66777 999999999999 99999999999999999987 66555555 88999999999887
Q ss_pred EEEEeCCCcEEEEEccC-CeeeeeecccCCCCCCCCCCceEEEEcC-CCCEEEEEeCCCeEEEEECCCC------cEEEe
Q 002266 160 LASIDSIGTVIYWELQS-GRELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVPGLKNDVVMYDRDTA------EKLFS 231 (945)
Q Consensus 160 Las~s~Dg~I~iwDl~t-~~~i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La~gs~dg~I~vwD~~t~------~~~~~ 231 (945)
+++++.||.|++||+++ +........ ..+...+.+++|+| ++++|++++.+|.|++|+++.. +....
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEE-----SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEE-----CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred EEEEeCCCeEEEEECCccccccceeee-----cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 99999999999999987 543211111 13456789999999 9999999999999999999876 66666
Q ss_pred ecCCCC---------CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cC-CCCeeEEEEecCCCEEEEEEcCC
Q 002266 232 LRGDHV---------QPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KF-DDRICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 232 ~~~~h~---------~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~-~~~V~~la~spdg~~Las~s~DG 300 (945)
+.. |. ..|.+++|+|++++|++++.||.|+|||+.+++.+... .| ...|++++ |++++|++++.||
T Consensus 238 ~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 238 FRC-HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEC-CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eec-ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 665 43 49999999999999999999999999999999887774 45 78899999 9999999999999
Q ss_pred e-EEEEe
Q 002266 301 K-YGVWE 306 (945)
Q Consensus 301 ~-I~iWd 306 (945)
. .+.|.
T Consensus 315 ~~~~~~~ 321 (342)
T 1yfq_A 315 TFKTNAA 321 (342)
T ss_dssp HHHHCSS
T ss_pred ccccccc
Confidence 8 44444
No 56
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.2e-31 Score=304.47 Aligned_cols=281 Identities=16% Similarity=0.291 Sum_probs=237.7
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccc--ccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKI--LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~--l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
++.|+||+++ .|+++ .|++|+|||..++. .... +.+|...|++|+|+|+|++|++|+.||.|++||+.+++.+.
T Consensus 108 ~~~l~wS~~n-~lAvg--ld~tV~lWd~~tg~-~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVA--LDNSVYLWSASSGD-ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp CBCEEECTTS-EEEEE--ETTEEEEEETTTCC-EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ceeEEECCCC-EEEEE--eCCEEEEEECCCCC-EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 5678999764 66655 48999999998874 3333 34678889999999999999999999999999999999999
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC-eEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccC
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG-SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~-~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t 176 (945)
.+..|...+.+++++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+|++.++++++.||.|++|+..+
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 999999999988875 689999999999999998864 46678899999999999999999999999999999999987
Q ss_pred CeeeeeecccCCCCCCCCCCceEEEEcCCC-CEEEE--EeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEE
Q 002266 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDG-ETLAV--PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253 (945)
Q Consensus 177 ~~~i~~~~~~~~~~~~~~~~i~~l~~spdg-~~La~--gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~La 253 (945)
++...... .....+...|.+++|+|.+ ..+++ |+.|+.|++||+.++..+..+.. ...+.++.|+|+++.++
T Consensus 262 ~~~~~~~~---~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv 336 (420)
T 4gga_A 262 GEGGWVPL---QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELI 336 (420)
T ss_dssp CSSCSCCS---EEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEE
T ss_pred ccccceee---eeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEE
Confidence 75322111 1122456789999999954 55555 35799999999999998888764 46899999999999988
Q ss_pred EEE--CCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 254 TSS--LDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 254 sgs--~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
+++ .|+.|+|||+.+++.+.. .+|...|++++|+|+|++|++|+.||+|+||++....
T Consensus 337 ~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 876 689999999999988877 5688999999999999999999999999999987543
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-31 Score=292.79 Aligned_cols=250 Identities=19% Similarity=0.270 Sum_probs=209.1
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCC-ccccccccccccceEEEEEec--CCCEEEEEEcCCcEEEEEcC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLP-SNLPKILRHHRDGVTALALSP--NSTCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~-~~~~~~l~~h~~~V~~la~sp--dg~~Lasgs~Dg~V~iwdl~ 91 (945)
+|...|++++|+|+|++|++++ .|++|+||++... ......+.+|.+.|++++|++ ++++|++|+.|++|++||+.
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s-~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred CCcCceEEEEECCCCCEEEEEe-CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 5669999999999999999987 9999999998643 245677889999999999986 48999999999999999998
Q ss_pred CCe--eeeecccCCCCEEEEEEecC--CCEEEEEECCCcEEEEEcCCCe--EEEEEecCCCCEEEEEEccC---------
Q 002266 92 GGE--FQTNITRFTLPIRVLAFNKS--GSMLAAAGDDEGIKLINTIDGS--IARVLKGHKGPVTGLAFDPN--------- 156 (945)
Q Consensus 92 ~g~--~~~~l~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~iwd~~~~~--~~~~l~~h~~~V~~lafspd--------- 156 (945)
+++ ....+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCC
Confidence 774 44556778999999999997 8999999999999999998763 24567889999999999997
Q ss_pred ----CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC---CEEEEEeCCCeEEEEECCCCc--
Q 002266 157 ----SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG---ETLAVPGLKNDVVMYDRDTAE-- 227 (945)
Q Consensus 157 ----g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg---~~La~gs~dg~I~vwD~~t~~-- 227 (945)
+++|++++.|+.|++||++++....... .....|...|.+++|+|++ .+|++++.|+.|++||+.+..
T Consensus 166 ~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~---~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLE---STLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp ----CCEEEEEETTSCEEEEEEETTTTEEEEE---EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred CCCCcceEEEEcCCCcEEEEEEcCCCceEEEE---EEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 5799999999999999998765221111 0122567889999999984 899999999999999998643
Q ss_pred -EEEeec-CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 228 -KLFSLR-GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 228 -~~~~~~-~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
....+. ..|...|.+++|+|+|++||+++.||.|+||+...
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 122221 24778999999999999999999999999999763
No 58
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-31 Score=299.78 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=215.0
Q ss_pred cccccccccc-ceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee---ecccCCCCEEEEEEecCCCEEEEEECCCcEE
Q 002266 53 LPKILRHHRD-GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT---NITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128 (945)
Q Consensus 53 ~~~~l~~h~~-~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~---~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~ 128 (945)
....+.+|.. .|++++|+|+|++|++|+.|++|+||++.++.... ...+|...|.+++|+|++++|++|+.|+.|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 3456678877 89999999999999999999999999998876432 2357899999999999999999999999999
Q ss_pred EEEcCCC--eEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC
Q 002266 129 LINTIDG--SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG 206 (945)
Q Consensus 129 iwd~~~~--~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg 206 (945)
+|++..+ ..+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.....+.. ...|...|.+++|+|++
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~----~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV----LNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE----ECCCCSCEEEEEECSSS
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE----ecCcCCCeEEEEECCCC
Confidence 9999876 45678899999999999999999999999999999999987643322211 12456789999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCc--EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC---------------
Q 002266 207 ETLAVPGLKNDVVMYDRDTAE--KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK--------------- 269 (945)
Q Consensus 207 ~~La~gs~dg~I~vwD~~t~~--~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~--------------- 269 (945)
++|++++.|+.|++||..++. ....+.+ |...|.+++|+|+|++|++++.|+.|+||+....
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~-h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEG-HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecC-CCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 999999999999999998775 3456665 9999999999999999999999999999996321
Q ss_pred eeeee--ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 270 LDIDR--QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 270 ~~i~~--~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
..+.. ..|...|.+++|+|++..|++++.|+.|++|+.....
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 11112 1267789999999999999999999999999986543
No 59
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.9e-31 Score=293.43 Aligned_cols=246 Identities=21% Similarity=0.289 Sum_probs=220.2
Q ss_pred cccccccccceEEEEEecCC-CEEEEEEcCCcEEEEEcCC-----CeeeeecccCCCCEEEEEEecCCCEEEEEECCCcE
Q 002266 54 PKILRHHRDGVTALALSPNS-TCLASGSIDHSVKLYKFPG-----GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGI 127 (945)
Q Consensus 54 ~~~l~~h~~~V~~la~spdg-~~Lasgs~Dg~V~iwdl~~-----g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I 127 (945)
...+.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +.....+.+|...|.+++|+|++.+|++|+.|+.|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 44678999999999999965 8999999999999999863 33456788999999999999999999999999999
Q ss_pred EEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC--
Q 002266 128 KLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD-- 205 (945)
Q Consensus 128 ~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd-- 205 (945)
++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++.. .+..+. .|...+.+++|+|.
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~-------~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLL-------GHNDWVSQVRVVPNEK 161 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEEC-------CCSSCEEEEEECCC--
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEe-------ccCCcEEEEEEccCCC
Confidence 99999999999999999999999999999999999999999999999643 344433 45677899999985
Q ss_pred ----CCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCe
Q 002266 206 ----GETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRI 281 (945)
Q Consensus 206 ----g~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V 281 (945)
+..|++++.|+.|++||+.+++....+.+ |...|.+++|+|+|++|++++.||.|+|||+.+++.+....+...|
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v 240 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEV 240 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECC-CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCE
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcE
Confidence 45899999999999999999988888877 9999999999999999999999999999999999998888778899
Q ss_pred eEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 282 CCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 282 ~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
.+++|+|++.+|++++.++ +++|++..
T Consensus 241 ~~~~~sp~~~~la~~~~~~-i~v~~~~~ 267 (319)
T 3frx_A 241 FSLAFSPNRYWLAAATATG-IKVFSLDP 267 (319)
T ss_dssp EEEEECSSSSEEEEEETTE-EEEEEETT
T ss_pred EEEEEcCCCCEEEEEcCCC-cEEEEeCc
Confidence 9999999999998887655 99998753
No 60
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.1e-31 Score=294.61 Aligned_cols=252 Identities=21% Similarity=0.323 Sum_probs=215.3
Q ss_pred ccccccccccceEEEEE-----ec-CCCEEEEEEcCCcEEEEEcCCC-------eeeeecccCCCCEEEEEEecCCCEEE
Q 002266 53 LPKILRHHRDGVTALAL-----SP-NSTCLASGSIDHSVKLYKFPGG-------EFQTNITRFTLPIRVLAFNKSGSMLA 119 (945)
Q Consensus 53 ~~~~l~~h~~~V~~la~-----sp-dg~~Lasgs~Dg~V~iwdl~~g-------~~~~~l~~~~~~V~~l~fspdg~~La 119 (945)
....+.+|.+.|++++| ++ ++.+|++|+.|++|++|++... .....+.+|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 34568899999999999 76 8999999999999999998753 44567788999999999999999999
Q ss_pred EEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceE
Q 002266 120 AAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNV 199 (945)
Q Consensus 120 sgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~ 199 (945)
+|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+..... .... ....+...+.+
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~~~----~~~~~~~~v~~ 167 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK-FSSA----EKENHSDWVSC 167 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EECC----TTTSCSSCEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce-eeee----cccCCCceeee
Confidence 999999999999999999999999999999999999999999999999999999974332 2221 12245678999
Q ss_pred EEEcCCC----------CEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC-C
Q 002266 200 LSWSPDG----------ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-K 268 (945)
Q Consensus 200 l~~spdg----------~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~-~ 268 (945)
++|+|++ .+|++++.|+.|++||. .......+.+ |...|.+++|+|+|++|++|+.||.|+|||+. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~-h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKA-HESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcC-ccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999987 79999999999999994 4566667766 88999999999999999999999999999994 4
Q ss_pred CeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 269 KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 269 ~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
........+...|.+++|+|++.+|++ +.|+.|++|++.....
T Consensus 246 ~~~~~~~~~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 246 TYPQREFDAGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSK 288 (343)
T ss_dssp SSCSEEEECSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCS
T ss_pred cccceeecCCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCC
Confidence 444444556678999999999987765 4677899999876553
No 61
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-31 Score=295.27 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=199.1
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCC------ccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEE
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLP------SNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~------~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd 89 (945)
|...|.+++|+|++++|++++ .|++|+||+.... ......+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 57 h~~~v~~v~~sp~~~~las~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGS-FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEE-TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 779999999999999999987 9999999998532 123456788999999999999999999999999999999
Q ss_pred cCC----CeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC--eEEEEEecCCCCEEEEEEccC--CCEEE
Q 002266 90 FPG----GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG--SIARVLKGHKGPVTGLAFDPN--SEYLA 161 (945)
Q Consensus 90 l~~----g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~--~~~~~l~~h~~~V~~lafspd--g~~La 161 (945)
+.. .+....+..|...|.+++|+|++.+|++|+.|+.|++||..++ ..+..+.+|...|.+++|+|+ +.+|+
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 943 2456678889999999999999999999999999999999876 577889999999999999998 67899
Q ss_pred EEeCCCcEEEEEccCCe--------eeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEe
Q 002266 162 SIDSIGTVIYWELQSGR--------ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE--KLFS 231 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t~~--------~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~--~~~~ 231 (945)
+++.|++|++||+..+. ....+. ..|...|.+++|++++ +|++++.|+.|++||..+++ ....
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~ 288 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILP------DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAK 288 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECC------SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecc------cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEec
Confidence 99999999999997642 111111 1356789999999765 78999999999999998774 3333
Q ss_pred ecCCCCC-CeEEEEEcC--CCCEEEEEECCCeEEEEECCC
Q 002266 232 LRGDHVQ-PICFLSWSP--NGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 232 ~~~~h~~-~I~~l~fSp--dg~~Lasgs~Dg~I~IWD~~~ 268 (945)
....|.. .|.+++|+| ++++||+|+.||.|+|||+..
T Consensus 289 ~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 289 RALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 3334766 899999999 789999999999999999865
No 62
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-30 Score=286.40 Aligned_cols=279 Identities=16% Similarity=0.285 Sum_probs=233.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccc--ccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKI--LRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~--l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
+++|+||+++ .|+++ .|++|+|||+.++. .... +.+|...|++++|+|++++|++|+.||.|++|++.+++.+.
T Consensus 28 ~~~l~WS~~~-~lAvg--~D~tV~iWd~~tg~-~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA--LDNSVYLWSASSGD-ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp CBCEEECTTS-EEEEE--ETTEEEEEETTTCC-EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEECCCC-EEEEE--eCCEEEEEECCCCC-EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 4679999986 56554 59999999998874 3333 34678889999999999999999999999999999999999
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC-eEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccC
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG-SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS 176 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~-~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t 176 (945)
.+..|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+..+.|++++++|++++.||.|++||+++
T Consensus 104 ~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 104 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 99999888876655 5689999999999999998875 45677889999999999999999999999999999999988
Q ss_pred CeeeeeecccCCCCCCCCCCceEEEEcCCCC-EE--EEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEE
Q 002266 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGE-TL--AVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253 (945)
Q Consensus 177 ~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~-~L--a~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~La 253 (945)
++....... ....+...+..++++|++. .+ ++++.++.|++||........... +...+..+.|+|++..++
T Consensus 182 ~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 182 GEGGWVPLQ---TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELI 256 (318)
T ss_dssp BTTBSCCSE---EECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTTEEE
T ss_pred Cccccccee---eecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--ceeeeeeeeecccccceE
Confidence 654322211 1123456789999999654 33 356678999999999888776654 567899999999999887
Q ss_pred EEE--CCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 254 TSS--LDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 254 sgs--~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
+++ .|+.|+|||+.+++.+.. ..|...|++++|+|++++|++++.||+|+||++..
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 765 689999999999988877 45889999999999999999999999999999864
No 63
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.3e-32 Score=307.36 Aligned_cols=255 Identities=18% Similarity=0.305 Sum_probs=222.3
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc------cccccccccccceEEEEEecC-CCEEEEEEcCCcEEE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS------NLPKILRHHRDGVTALALSPN-STCLASGSIDHSVKL 87 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~------~~~~~l~~h~~~V~~la~spd-g~~Lasgs~Dg~V~i 87 (945)
+|...|.+++|+|+|++|++++ .|+.|+||++.... .....+.+|.+.|.++.|+|+ +..|++|+.|++|++
T Consensus 106 ~h~~~v~~~~~s~~g~~las~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~ 184 (380)
T 3iz6_a 106 LHCPWVMECAFAPNGQSVACGG-LDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVL 184 (380)
T ss_dssp CCCTTCCCCEECTTSSEEEECC-SSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEE
T ss_pred cCCCCEEEEEECCCCCEEEEee-CCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEE
Confidence 5668899999999999999986 99999999986432 234567899999999999996 467999999999999
Q ss_pred EEcCCCeeeeec-----ccCCCCEEEEEEec-CCCEEEEEECCCcEEEEEcC-CCeEEEEEecCCCCEEEEEEccCCCEE
Q 002266 88 YKFPGGEFQTNI-----TRFTLPIRVLAFNK-SGSMLAAAGDDEGIKLINTI-DGSIARVLKGHKGPVTGLAFDPNSEYL 160 (945)
Q Consensus 88 wdl~~g~~~~~l-----~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~iwd~~-~~~~~~~l~~h~~~V~~lafspdg~~L 160 (945)
||+.+++.+..+ ..|...|.+++|++ ++.+|++|+.|+.|++||++ .+..+..+.+|...|.+++|+|++.+|
T Consensus 185 wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 264 (380)
T 3iz6_a 185 WDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF 264 (380)
T ss_dssp ECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE
T ss_pred EEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE
Confidence 999999877665 56888999999987 88999999999999999998 457788899999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec---CCCC
Q 002266 161 ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR---GDHV 237 (945)
Q Consensus 161 as~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~---~~h~ 237 (945)
++++.||+|++||++++..+..+.........+...+.+++|+|+|++|++|+.||.|++||+.+++.+..+. ..|.
T Consensus 265 ~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~ 344 (380)
T 3iz6_a 265 GTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHE 344 (380)
T ss_dssp EEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCC
T ss_pred EEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCC
Confidence 9999999999999999988877765433222334568899999999999999999999999999988877662 3488
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe
Q 002266 238 QPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270 (945)
Q Consensus 238 ~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~ 270 (945)
..|++++|+|+|.+|++|+.||.|+||++...+
T Consensus 345 ~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 345 GRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999999999999999997654
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-32 Score=325.35 Aligned_cols=287 Identities=11% Similarity=0.097 Sum_probs=229.4
Q ss_pred CCCCEEEEEECCCC---------CEEEEEE------------------cCCCeEEEEcCCCCccc---cccccccccceE
Q 002266 16 NAASFCSILWDQQA---------HHLVTAS------------------SSETTISIHDPLLPSNL---PKILRHHRDGVT 65 (945)
Q Consensus 16 h~~~V~svafspdg---------~~L~t~g------------------~~dg~V~IWd~~~~~~~---~~~l~~h~~~V~ 65 (945)
+.+.|.+|+|+|++ ++||+++ +.|++|+||++.++... ...+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 34789999999887 5666643 36789999998665321 133567788999
Q ss_pred EEEEecC------CCEEEEEEcCCcEEEEEcCCCee-----------eeecccCCCCEEEEEEecCCCEEEEEECCCcEE
Q 002266 66 ALALSPN------STCLASGSIDHSVKLYKFPGGEF-----------QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128 (945)
Q Consensus 66 ~la~spd------g~~Lasgs~Dg~V~iwdl~~g~~-----------~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~ 128 (945)
+++|+|+ +.+||+++.||+|++|++.++.. ...+..|...|++++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 57999999999999999976642 1256678899999999986 4899999999999
Q ss_pred EEEcCCCe-EEEEEecCCCCEEEE--EEccCC-CEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC
Q 002266 129 LINTIDGS-IARVLKGHKGPVTGL--AFDPNS-EYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204 (945)
Q Consensus 129 iwd~~~~~-~~~~l~~h~~~V~~l--afspdg-~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp 204 (945)
+||++++. ....+.+|...|.+| +|+|++ .+|++++.||+|+|||+++++.+..+..+.. ...+.+++|+|
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~-----~~~v~~v~fsp 365 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR-----GSNLVPVVYCP 365 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS-----CCSCCCEEEET
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc-----cCcccceEeCC
Confidence 99998763 456688999999999 578887 8999999999999999998876555543211 12367899999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe--------------
Q 002266 205 DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL-------------- 270 (945)
Q Consensus 205 dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~-------------- 270 (945)
+++.|++++.|+.|++||++++..+..+.+ |...|++|+|+|+|++|++|+.||+|+|||+..+.
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~ 444 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSL 444 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCC
T ss_pred CcCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeee
Confidence 999999999999999999999988777776 99999999999999999999999999999853210
Q ss_pred ee-------------------------------eeccCCCCeeEEEEecCCC---EEEEEEcCCeEEEEecCC
Q 002266 271 DI-------------------------------DRQKFDDRICCMAWKPIGN---ALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 271 ~i-------------------------------~~~~~~~~V~~la~spdg~---~Las~s~DG~I~iWd~~~ 309 (945)
.+ ...+|...|.+++|+|+++ .||+|+.+|.|+||++..
T Consensus 445 ~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 445 RLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp EEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred EEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 00 0023556899999999964 999999999999999753
No 65
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-30 Score=311.63 Aligned_cols=290 Identities=18% Similarity=0.240 Sum_probs=246.9
Q ss_pred CCCCCEEEEEECCCCC-EEEEEEcCCCeEEEEcCCCCcccccccccccc---ceEEEEEecC-CCEEEEEEcCCcEEEEE
Q 002266 15 GNAASFCSILWDQQAH-HLVTASSSETTISIHDPLLPSNLPKILRHHRD---GVTALALSPN-STCLASGSIDHSVKLYK 89 (945)
Q Consensus 15 gh~~~V~svafspdg~-~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~---~V~~la~spd-g~~Lasgs~Dg~V~iwd 89 (945)
+|...|++++|+|+++ .+++++ .|+.|++||..+. .....+..|.. .|++++|+|+ +++|++++.||.|++||
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~-~d~~v~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd 235 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVG-DDGSVVFYQGPPF-KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 235 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEE-TTTEEEEEETTTB-EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred cCCccEEEEEECCCCCcEEEEEe-CCCcEEEEeCCCc-ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 5678999999999998 566665 9999999998776 45667788988 9999999999 99999999999999999
Q ss_pred cCCCeeeeec-c---cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecC----CCCEEEEEEccCCCEEE
Q 002266 90 FPGGEFQTNI-T---RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH----KGPVTGLAFDPNSEYLA 161 (945)
Q Consensus 90 l~~g~~~~~l-~---~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h----~~~V~~lafspdg~~La 161 (945)
+.+++....+ . .|...|.+++|+ ++.+|++++.|+.|++||+.+++.+..+..+ ...+.++.|. ++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 313 (615)
T 1pgu_A 236 GKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRII 313 (615)
T ss_dssp TTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEE
T ss_pred CCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEE
Confidence 9999988888 5 789999999999 9999999999999999999999988888766 3667777775 777777
Q ss_pred EEeCCCcEEEEEccCCeeeeeeccc-------------------------------------------------------
Q 002266 162 SIDSIGTVIYWELQSGRELHNLKRV------------------------------------------------------- 186 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t~~~i~~~~~~------------------------------------------------------- 186 (945)
+++.||.|++||+.+++.+..+..+
T Consensus 314 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~ 393 (615)
T 1pgu_A 314 SLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDD 393 (615)
T ss_dssp EEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTT
T ss_pred EEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCC
Confidence 7777777777776643322211100
Q ss_pred ------------------------------------------------------------------------C-------
Q 002266 187 ------------------------------------------------------------------------A------- 187 (945)
Q Consensus 187 ------------------------------------------------------------------------~------- 187 (945)
.
T Consensus 394 ~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~ 473 (615)
T 1pgu_A 394 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFK 473 (615)
T ss_dssp EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEE
T ss_pred CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEE
Confidence 0
Q ss_pred --------CCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcC----------CC
Q 002266 188 --------PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSP----------NG 249 (945)
Q Consensus 188 --------~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSp----------dg 249 (945)
.....+...+.+++|+|+|++|++++.|+.|++||+.+++.+..+.+.|...|++++|+| ++
T Consensus 474 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~ 553 (615)
T 1pgu_A 474 LSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 553 (615)
T ss_dssp TTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSC
T ss_pred CCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCC
Confidence 112345677899999999999999999999999999999998888766899999999999 99
Q ss_pred CEEEEEECCCeEEEEECCCC-eeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 250 KYMATSSLDRQILIWDVGKK-LDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 250 ~~Lasgs~Dg~I~IWD~~~~-~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
++|++++.||.|+|||+.++ ..+.. ..|...|++++|+|+++ |++++.||.|++|++..
T Consensus 554 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 554 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp CEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 99999999999999999987 55554 56889999999999999 99999999999999853
No 66
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.6e-31 Score=301.77 Aligned_cols=244 Identities=19% Similarity=0.247 Sum_probs=205.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccc---ccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLP---KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~---~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~ 91 (945)
+|...|++++|+|++.+| +++ .||+|+|||+.++.... ....+|...|++++|+|++++|++|+.|+.|++||+.
T Consensus 92 ~~~~~V~~~~~s~d~~~l-~~s-~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~ 169 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGIL-VAS-DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS 169 (357)
T ss_dssp ECSSCEEEEEEETTTEEE-EEE-TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCCCEEEEEEcCCCCEE-EEE-CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 577889999999998755 454 79999999987764322 2334789999999999999999999999999999999
Q ss_pred CCeeeeecccCCCCEEEEEEecCCC-EEEEEECCCcEEEEEcCCCeEEEEE--ecCCCCEEEEEEccC-CCEEEEEeCCC
Q 002266 92 GGEFQTNITRFTLPIRVLAFNKSGS-MLAAAGDDEGIKLINTIDGSIARVL--KGHKGPVTGLAFDPN-SEYLASIDSIG 167 (945)
Q Consensus 92 ~g~~~~~l~~~~~~V~~l~fspdg~-~Lasgs~Dg~I~iwd~~~~~~~~~l--~~h~~~V~~lafspd-g~~Las~s~Dg 167 (945)
+++....+..|...|.+++|++++. ++++++.|+.|++||+++++....+ ..|...+.+++|+|+ +.+|++++.|+
T Consensus 170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~ 249 (357)
T 4g56_B 170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG 249 (357)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc
Confidence 9999999999999999999999875 7899999999999999988766544 356788999999997 46889999999
Q ss_pred cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEc
Q 002266 168 TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG-ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWS 246 (945)
Q Consensus 168 ~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg-~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fS 246 (945)
.|++||+++++.+..+. .+...|++++|+|++ ++|++++.|+.|+|||+.+++.+..+ + |...|++++|+
T Consensus 250 ~i~~wd~~~~~~~~~~~-------~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~-H~~~V~~vafs 320 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSA-------VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-S-HRDFVTGVAWS 320 (357)
T ss_dssp CEEEEESSCGGGCEEEC-------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-C-CSSCEEEEEEC
T ss_pred ceeEEECCCCcEeEEEe-------ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-C-CCCCEEEEEEe
Confidence 99999999988777664 345779999999987 67899999999999999998877655 3 99999999999
Q ss_pred C-CCCEEEEEECCCeEEEEECCCC
Q 002266 247 P-NGKYMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 247 p-dg~~Lasgs~Dg~I~IWD~~~~ 269 (945)
| ++.+|++++.||.|++|++.+.
T Consensus 321 P~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 321 PLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCCEEEEEcCCCeEEEEECCCC
Confidence 9 8999999999999999999764
No 67
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.1e-31 Score=305.05 Aligned_cols=279 Identities=18% Similarity=0.326 Sum_probs=241.2
Q ss_pred ccccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEE
Q 002266 9 REAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88 (945)
Q Consensus 9 ~~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iw 88 (945)
...|. +|...|+|++| ++++|++++ .||.|++||..++ .....+.+|...|.+++| ++.+|++|+.||.|++|
T Consensus 126 ~~~~~-~~~~~v~~~~~--d~~~l~~g~-~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vw 198 (435)
T 1p22_A 126 IHCRS-ETSKGVYCLQY--DDQKIVSGL-RDNTIKIWDKNTL-ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVW 198 (435)
T ss_dssp EECCC-SSCCCEEEEEC--CSSEEEEEE-SSSCEEEEESSSC-CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred Eeccc-CCCCcEEEEEE--CCCEEEEEe-CCCeEEEEeCCCC-eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEE
Confidence 34556 77788999777 899999987 9999999998776 456778899999999998 78899999999999999
Q ss_pred EcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEE---EEEecCCCCEEEEEEccCCCEEEEEeC
Q 002266 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA---RVLKGHKGPVTGLAFDPNSEYLASIDS 165 (945)
Q Consensus 89 dl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~---~~l~~h~~~V~~lafspdg~~Las~s~ 165 (945)
|+.+++....+..|...|.+++|+ +..+++|+.||.|++||+.++... ..+.+|...|.+++| ++++|++++.
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~ 274 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 274 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeC
Confidence 999999999999999999999996 469999999999999999887654 677889999999999 6889999999
Q ss_pred CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEE
Q 002266 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSW 245 (945)
Q Consensus 166 Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~f 245 (945)
||.|++||+++++.+..+.. +...+.+++| ++.++++|+.||.|++||+++++.+..+.+ |...|.+++|
T Consensus 275 dg~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~ 344 (435)
T 1p22_A 275 DRTIKVWNTSTCEFVRTLNG-------HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF 344 (435)
T ss_dssp TSEEEEEETTTCCEEEEEEC-------CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEC
T ss_pred CCeEEEEECCcCcEEEEEcC-------CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC-CcCcEEEEEe
Confidence 99999999999988877753 4567888888 578999999999999999999999999887 9999999999
Q ss_pred cCCCCEEEEEECCCeEEEEECCCCe---------eee-eccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 246 SPNGKYMATSSLDRQILIWDVGKKL---------DID-RQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 246 Spdg~~Lasgs~Dg~I~IWD~~~~~---------~i~-~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
++.+|++|+.||.|+|||+.++. .+. ...|...|++++| ++.+|++++.||.|++|++..+..
T Consensus 345 --~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 345 --DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp --CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred --cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 78999999999999999986654 333 3568889999999 678999999999999999876554
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-31 Score=299.06 Aligned_cols=247 Identities=20% Similarity=0.305 Sum_probs=211.9
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
..|++++|+|+|++|++++ .|+.|+|||+.+. .....+.+|...|++++|+|++.+|++|+.|++|++||+.+++...
T Consensus 124 ~~v~~v~~s~dg~~l~s~~-~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGA-EDRLIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp CBEEEEEECTTSSEEEEEE-TTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred eeEEEEEECCCCCEEEEEc-CCCeEEEEECCCC-cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE
Confidence 3599999999999999987 9999999999876 4566788999999999999999999999999999999999998776
Q ss_pred ecccCCCCEEEEEEec-CCCEEEEEECCCcEEEEEcCCCeEEEEE-------ecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 002266 98 NITRFTLPIRVLAFNK-SGSMLAAAGDDEGIKLINTIDGSIARVL-------KGHKGPVTGLAFDPNSEYLASIDSIGTV 169 (945)
Q Consensus 98 ~l~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~iwd~~~~~~~~~l-------~~h~~~V~~lafspdg~~Las~s~Dg~I 169 (945)
.+. +...+.+++|+| ++.+|++|+.|+.|++||++++..+..+ .+|...|.+++|+|++++|++++.||.|
T Consensus 202 ~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 202 TLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 665 567899999999 8999999999999999999998877766 5789999999999999999999999999
Q ss_pred EEEEccCCeeeeeeccc-----CCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEE
Q 002266 170 IYWELQSGRELHNLKRV-----APDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~-----~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~ 244 (945)
++||+++.......... ......|...+.+++|+|++.+|++++.|+.|++||..+++.+..+.+ |...|.+++
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~-h~~~v~~v~ 359 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVA 359 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-CCCCEEEEE
Confidence 99999865332111000 001124667899999999999999999999999999999999988887 999999999
Q ss_pred EcC------CCCEEEEEECCCeEEEEECCC
Q 002266 245 WSP------NGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 245 fSp------dg~~Lasgs~Dg~I~IWD~~~ 268 (945)
|++ ++.+|++|+.||.|+||++..
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 986 688999999999999999764
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-31 Score=296.33 Aligned_cols=251 Identities=21% Similarity=0.336 Sum_probs=206.8
Q ss_pred cccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe--eeeecccCCCCEEEEEEec--CCCEEEEEECCCcEEE
Q 002266 54 PKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE--FQTNITRFTLPIRVLAFNK--SGSMLAAAGDDEGIKL 129 (945)
Q Consensus 54 ~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~--~~~~l~~~~~~V~~l~fsp--dg~~Lasgs~Dg~I~i 129 (945)
...+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++. ....+.+|..+|.+++|++ ++.+|++|+.|++|++
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 34567899999999999999999999999999999998775 4567889999999999986 4899999999999999
Q ss_pred EEcCCC--eEEEEEecCCCCEEEEEEccC--CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC
Q 002266 130 INTIDG--SIARVLKGHKGPVTGLAFDPN--SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205 (945)
Q Consensus 130 wd~~~~--~~~~~l~~h~~~V~~lafspd--g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd 205 (945)
||++++ .....+.+|...|.+++|+|+ +.+|++++.||.|++||++.+...... .....|...+.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~----~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK----KINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC----CBTTSSSSCBCCCEECCC
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee----eeeccccCCcceEEEccc
Confidence 999887 356678899999999999997 789999999999999999876322111 112245667888999997
Q ss_pred -----------------CCEEEEEeCCCeEEEEECCCC---cEEEeecCCCCCCeEEEEEcCCC----CEEEEEECCCeE
Q 002266 206 -----------------GETLAVPGLKNDVVMYDRDTA---EKLFSLRGDHVQPICFLSWSPNG----KYMATSSLDRQI 261 (945)
Q Consensus 206 -----------------g~~La~gs~dg~I~vwD~~t~---~~~~~~~~~h~~~I~~l~fSpdg----~~Lasgs~Dg~I 261 (945)
+++|++|+.|+.|++||+... ..+..+.+ |...|.+++|+|++ .+|++++.||+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc-CCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 478999999999999999754 35566666 99999999999986 899999999999
Q ss_pred EEEECCCC---e--eeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 262 LIWDVGKK---L--DIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 262 ~IWD~~~~---~--~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
+||++.+. . ......|...|.+++|+|++++|++++.||.|++|+...
T Consensus 241 ~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99999762 1 112245778999999999999999999999999999753
No 70
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.9e-31 Score=293.68 Aligned_cols=283 Identities=13% Similarity=0.177 Sum_probs=235.5
Q ss_pred CCCCCEEEEEECCC---CCEEEEEEcCCCeEEEEcCCC-CccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEc
Q 002266 15 GNAASFCSILWDQQ---AHHLVTASSSETTISIHDPLL-PSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafspd---g~~L~t~g~~dg~V~IWd~~~-~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl 90 (945)
+|.+.|++++|+|+ |++|++++ .||.|+|||+.+ .......+.+|...|++++|+|++++|++++.||.|++||+
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGS-WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEE-TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCCceEEEEEcCCCCCceEEEEEC-CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 67799999999999 58888886 999999999987 43444678889999999999999999999999999999999
Q ss_pred CCCeeeeecccCCCCEEEEEE--ecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCc
Q 002266 91 PGGEFQTNITRFTLPIRVLAF--NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168 (945)
Q Consensus 91 ~~g~~~~~l~~~~~~V~~l~f--spdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~ 168 (945)
.+++... +..|...|.+++| ++++.+|++++.|+.|++||+++++.+..+..+. .+.++.+. +..+++++.++.
T Consensus 116 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~ 191 (368)
T 3mmy_A 116 SSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERG 191 (368)
T ss_dssp TTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGC
T ss_pred CCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCc
Confidence 9988665 5568999999999 8899999999999999999999999888888664 66667666 457888999999
Q ss_pred EEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCE----EEEEeCCCeEEEEECCCC---cEEEeecCCCCC---
Q 002266 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGET----LAVPGLKNDVVMYDRDTA---EKLFSLRGDHVQ--- 238 (945)
Q Consensus 169 I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~----La~gs~dg~I~vwD~~t~---~~~~~~~~~h~~--- 238 (945)
+.+|+++........... .......++++.+++.. +++++.++.|++||+... ..+..+.. |..
T Consensus 192 i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~~~~~ 265 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIES-----PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC-HRSNGT 265 (368)
T ss_dssp EEEEECSSSCEEEEECCC-----SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC-SEEC--
T ss_pred EEEEEeccccchhhhccc-----cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee-eecccc
Confidence 999999876543332211 12234556666655444 999999999999999987 44556655 444
Q ss_pred ---------CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 239 ---------PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 239 ---------~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.|++++|+|++++|++++.||.|+|||+.++..+.. ..|...|++++|+|++++|++++.|+..+.|++.
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 799999999999999999999999999999988777 4578899999999999999999999866666543
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.9e-31 Score=303.40 Aligned_cols=283 Identities=14% Similarity=0.150 Sum_probs=238.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcc---ccccccccccceEEEEEec-CCCEEEEEEcCCcEEEEEcCCC--
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDPLLPSN---LPKILRHHRDGVTALALSP-NSTCLASGSIDHSVKLYKFPGG-- 93 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~---~~~~l~~h~~~V~~la~sp-dg~~Lasgs~Dg~V~iwdl~~g-- 93 (945)
...++++|+...++++++.+|.|+||++..... ....+.+|.+.|++++|+| ++.+|++|+.||.|++|++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 345778888877776666899999999865432 3345678999999999999 9999999999999999999887
Q ss_pred -----eeeeecccCCCCEEEEEEecCC-CEEEEEECCCcEEEEEcCCCeEEEEE--ecCCCCEEEEEEccCCCEEEEEeC
Q 002266 94 -----EFQTNITRFTLPIRVLAFNKSG-SMLAAAGDDEGIKLINTIDGSIARVL--KGHKGPVTGLAFDPNSEYLASIDS 165 (945)
Q Consensus 94 -----~~~~~l~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~iwd~~~~~~~~~l--~~h~~~V~~lafspdg~~Las~s~ 165 (945)
+....+..|...|.+++|+|++ .+|++++.|+.|++||+.+++.+..+ ..|...|.+++|+|++.+|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 5567788899999999999998 69999999999999999999999999 789999999999999999999999
Q ss_pred CCcEEEEEccCCeeeeee-cccCCCCCCCCCCceEEEEcCCCCEEEEE---eCCCeEEEEECCCCcE-EEeecCCCCCCe
Q 002266 166 IGTVIYWELQSGRELHNL-KRVAPDIGSDPSSMNVLSWSPDGETLAVP---GLKNDVVMYDRDTAEK-LFSLRGDHVQPI 240 (945)
Q Consensus 166 Dg~I~iwDl~t~~~i~~~-~~~~~~~~~~~~~i~~l~~spdg~~La~g---s~dg~I~vwD~~t~~~-~~~~~~~h~~~I 240 (945)
||.|++||+++++.+..+ ..+ ....+.+++|+|++++|++| +.++.|++||++++.. +......+...+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 270 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPH------EGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV 270 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSS------CSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC
T ss_pred CCcEEEEeCCCCceeeeeccCC------CCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce
Confidence 999999999999887776 321 12247889999999999999 7899999999998764 333333367889
Q ss_pred EEEEEcCCCCEEEEE-ECCCeEEEEECCCCee----eeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCC
Q 002266 241 CFLSWSPNGKYMATS-SLDRQILIWDVGKKLD----IDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 241 ~~l~fSpdg~~Lasg-s~Dg~I~IWD~~~~~~----i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~ 310 (945)
.+++|+|++++|+++ +.||.|++||+.++.. +....+...|.+++|+|++.++++ .++.+++|++...
T Consensus 271 ~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 271 LLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp EEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETT
T ss_pred eEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCC
Confidence 999999999999755 4799999999998773 223446689999999999988764 5679999998754
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.3e-29 Score=328.77 Aligned_cols=287 Identities=18% Similarity=0.258 Sum_probs=242.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEec--CCCEEEEEEcCCcEEEEEcCC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSP--NSTCLASGSIDHSVKLYKFPG 92 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~sp--dg~~Lasgs~Dg~V~iwdl~~ 92 (945)
+|...|.+++|+|+|++|++++ .|+.|+|||+.++ .....+.+|...|.+++|+| ++.++++|+.||.|++||+.+
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~-~d~~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCS-ADKKVKIWDSATG-KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTC-CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS
T ss_pred cCCCCEEEEEEecCCCEEEEEe-CCCeEEEEECCCC-ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC
Confidence 5779999999999999999987 8999999999876 55677889999999999999 556899999999999999999
Q ss_pred CeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE-------------------------------
Q 002266 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL------------------------------- 141 (945)
Q Consensus 93 g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l------------------------------- 141 (945)
++....+..|...|.+++|+|++.+|++++.||.|++||+.++.....+
T Consensus 733 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 733 KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp SSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred cchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 9999999999999999999999999999999999999999776543332
Q ss_pred ------------------------ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCc
Q 002266 142 ------------------------KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSM 197 (945)
Q Consensus 142 ------------------------~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i 197 (945)
.+|...|.+++|+|++.++++++.||.|++||+.++..+..+.. |...|
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-------h~~~v 885 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG-------HLSWV 885 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC-------CSSCE
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC-------Cccce
Confidence 16778899999999999999999999999999998877666542 23344
Q ss_pred eEEEEcCCC-----------------------------------------------------------------------
Q 002266 198 NVLSWSPDG----------------------------------------------------------------------- 206 (945)
Q Consensus 198 ~~l~~spdg----------------------------------------------------------------------- 206 (945)
.+++|+|+|
T Consensus 886 ~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 965 (1249)
T 3sfz_A 886 HGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVS 965 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEE
Confidence 445555544
Q ss_pred --------CEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCC
Q 002266 207 --------ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278 (945)
Q Consensus 207 --------~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~ 278 (945)
+++++|+.+|.|++||+.+++....+.+ |...|++++|+|+|++|++++.||.|++||+.++.......|.
T Consensus 966 ~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 1044 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG-HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQ 1044 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC-CSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCS
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCC
Confidence 4444444455555555555555555554 8899999999999999999999999999999999998888899
Q ss_pred CCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 279 DRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 279 ~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
..|.+++|+|++ .+++++.||.|++|++..+..
T Consensus 1045 ~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1045 ETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp SCEEEEEECSSS-EEEEEESSSEEEEEETTTTCC
T ss_pred CcEEEEEEcCCC-cEEEEECCCcEEEEECCCCce
Confidence 999999999966 688999999999999976654
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.3e-30 Score=292.58 Aligned_cols=252 Identities=21% Similarity=0.367 Sum_probs=218.4
Q ss_pred ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC--CCeeeeecccCCCCEEEEEEecC--CCEEEEEECCCcEE
Q 002266 53 LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP--GGEFQTNITRFTLPIRVLAFNKS--GSMLAAAGDDEGIK 128 (945)
Q Consensus 53 ~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~--~g~~~~~l~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~ 128 (945)
....+.+|...|++++|+|++++|++|+.||.|++|++. +++....+..|...|++++|+++ +.+|++++.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 456788999999999999999999999999999999997 55667788889999999999987 99999999999999
Q ss_pred EEEcCCCe--EEEEEecCCCCEEEEEEccC--CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC
Q 002266 129 LINTIDGS--IARVLKGHKGPVTGLAFDPN--SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204 (945)
Q Consensus 129 iwd~~~~~--~~~~l~~h~~~V~~lafspd--g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp 204 (945)
+||+.++. ....+..|...|.+++|+|+ +.+|++++.||.|++||++++........ ..+...+.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-----DAHAIGVNSASWAP 157 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-----ECCTTCEEEEEECC
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-----cCCCCceEEEEEcC
Confidence 99999987 67778889999999999999 99999999999999999988743322211 24567899999999
Q ss_pred -------------CCCEEEEEeCCCeEEEEECCCCc----EEEeecCCCCCCeEEEEEcCC---CCEEEEEECCCeEEEE
Q 002266 205 -------------DGETLAVPGLKNDVVMYDRDTAE----KLFSLRGDHVQPICFLSWSPN---GKYMATSSLDRQILIW 264 (945)
Q Consensus 205 -------------dg~~La~gs~dg~I~vwD~~t~~----~~~~~~~~h~~~I~~l~fSpd---g~~Lasgs~Dg~I~IW 264 (945)
++.+|++++.|+.|++||++++. ....+.+ |...|.+++|+|+ +.+|++++.||.|+||
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw 236 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE
Confidence 69999999999999999998764 3345555 8899999999999 8999999999999999
Q ss_pred ECCCCe----e--eeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCC
Q 002266 265 DVGKKL----D--IDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 265 D~~~~~----~--i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~ 310 (945)
|+.++. . .....+...|++++|+|++++|++++.||.|++|++..+
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred eCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 998863 1 122347788999999999999999999999999998754
No 74
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=5.1e-30 Score=282.53 Aligned_cols=258 Identities=21% Similarity=0.327 Sum_probs=221.0
Q ss_pred cccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC----eeeeecccCCCCEEEEEEec--CCCEEEEEECCCcE
Q 002266 54 PKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG----EFQTNITRFTLPIRVLAFNK--SGSMLAAAGDDEGI 127 (945)
Q Consensus 54 ~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g----~~~~~l~~~~~~V~~l~fsp--dg~~Lasgs~Dg~I 127 (945)
...+.+|.+.|++++|+|++++|++|+.||.|++|++.++ +....+..|...|.+++|+| ++.+|++|+.|+.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 4567889999999999999999999999999999999876 45667788999999999999 69999999999999
Q ss_pred EEEEcCCC---------eEEEEEecCCCCEEEEEEccC--CCEEEEEeCCCcEEEEEccCCeeeeeec------ccCCCC
Q 002266 128 KLINTIDG---------SIARVLKGHKGPVTGLAFDPN--SEYLASIDSIGTVIYWELQSGRELHNLK------RVAPDI 190 (945)
Q Consensus 128 ~iwd~~~~---------~~~~~l~~h~~~V~~lafspd--g~~Las~s~Dg~I~iwDl~t~~~i~~~~------~~~~~~ 190 (945)
++||+.++ .....+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+. ......
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999886 567788899999999999999 9999999999999999998876543322 111112
Q ss_pred CCCCCCceEEEEcCC---CCEEEEEeCCCeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCC----CEEEEEECCCeE
Q 002266 191 GSDPSSMNVLSWSPD---GETLAVPGLKNDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNG----KYMATSSLDRQI 261 (945)
Q Consensus 191 ~~~~~~i~~l~~spd---g~~La~gs~dg~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg----~~Lasgs~Dg~I 261 (945)
..+...+.+++|+|+ +.+|++++.++.+.+|+...+.. +..+.+ |...|++++|+|++ .+|++++.||.|
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-CCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 245678899999997 99999999999998888887765 555655 89999999999998 899999999999
Q ss_pred EEEECCCC----------------------------------------------eeeee-ccCCCCeeEEEEecCCCEEE
Q 002266 262 LIWDVGKK----------------------------------------------LDIDR-QKFDDRICCMAWKPIGNALA 294 (945)
Q Consensus 262 ~IWD~~~~----------------------------------------------~~i~~-~~~~~~V~~la~spdg~~La 294 (945)
+|||+..+ ..+.. ..|...|++++|+|++++|+
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 99999764 23332 45788999999999999999
Q ss_pred EEEcCCeEEEEecCCCCC
Q 002266 295 VIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 295 s~s~DG~I~iWd~~~~~~ 312 (945)
+++.||.|++|++..+..
T Consensus 323 s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEETTSCEEEEEECTTSC
T ss_pred EecCCCcEEEEecCcCcc
Confidence 999999999999986553
No 75
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=1.9e-30 Score=286.02 Aligned_cols=252 Identities=20% Similarity=0.295 Sum_probs=214.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc---cccccccccccceEEEEEec--CCCEEEEEEcCCcEEEEE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS---NLPKILRHHRDGVTALALSP--NSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~---~~~~~l~~h~~~V~~la~sp--dg~~Lasgs~Dg~V~iwd 89 (945)
+|.+.|++++|+|++++|++++ .||.|+|||+.... .....+.+|...|++++|+| ++.+|++|+.||.|++||
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCS-SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccccceeEEEEcCCCCEEEEee-CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 6779999999999999999987 99999999987653 23455678999999999999 699999999999999999
Q ss_pred cCCC---------eeeeecccCCCCEEEEEEecC--CCEEEEEECCCcEEEEEcCCCeEEEEEe-------------cCC
Q 002266 90 FPGG---------EFQTNITRFTLPIRVLAFNKS--GSMLAAAGDDEGIKLINTIDGSIARVLK-------------GHK 145 (945)
Q Consensus 90 l~~g---------~~~~~l~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~iwd~~~~~~~~~l~-------------~h~ 145 (945)
+.++ +....+..|...|.+++|+|+ +.+|++++.|+.|++||++++..+..+. .|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcc
Confidence 9877 556777889999999999999 9999999999999999998876433222 578
Q ss_pred CCEEEEEEccC---CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC----CEEEEEeCCCeE
Q 002266 146 GPVTGLAFDPN---SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG----ETLAVPGLKNDV 218 (945)
Q Consensus 146 ~~V~~lafspd---g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg----~~La~gs~dg~I 218 (945)
..+.+++|+|+ +.+|++++.++.+.+|+...+....... ...|...|.+++|+|++ ++|++++.||.|
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK-----LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEE-----CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeee-----cCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 89999999997 8999999999999888877765422211 22466789999999998 899999999999
Q ss_pred EEEECCCC----------------------------------------------cEEEeecCCCCCCeEEEEEcCCCCEE
Q 002266 219 VMYDRDTA----------------------------------------------EKLFSLRGDHVQPICFLSWSPNGKYM 252 (945)
Q Consensus 219 ~vwD~~t~----------------------------------------------~~~~~~~~~h~~~I~~l~fSpdg~~L 252 (945)
++||++.+ +.+..+.+ |...|++++|+|+|++|
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD-HNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECT-TSSCEEEEEECSSSCCE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec-ccccEEEEEEcCCCCEE
Confidence 99999864 45555665 88999999999999999
Q ss_pred EEEECCCeEEEEECCCCeeee
Q 002266 253 ATSSLDRQILIWDVGKKLDID 273 (945)
Q Consensus 253 asgs~Dg~I~IWD~~~~~~i~ 273 (945)
++++.||.|+||++.++..+.
T Consensus 322 ~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp EEEETTSCEEEEEECTTSCEE
T ss_pred EEecCCCcEEEEecCcCcchh
Confidence 999999999999998875443
No 76
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=2.3e-29 Score=291.62 Aligned_cols=274 Identities=17% Similarity=0.317 Sum_probs=242.8
Q ss_pred CCCCCE-EEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC
Q 002266 15 GNAASF-CSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 15 gh~~~V-~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g 93 (945)
+|.+.| ++ ++++|++|++++ .||.|++||+.++ .....+.+|...|.+++|+ +.+|++|+.||.|++||+.++
T Consensus 116 ~h~~~v~~~--~~~~g~~l~sg~-~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 116 GHDDHVITC--LQFCGNRIVSGS-DDNTLKVWSAVTG-KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp CSTTSCEEE--EEEETTEEEEEE-TTSCEEEEETTTC-CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred ccCCCcEEE--EEEcCCEEEEEE-CCCcEEEEECCCC-cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence 565654 55 455789999987 8999999999876 4567788999999999998 569999999999999999999
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwD 173 (945)
+....+..|...|.++.|+ +..+++|+.||.|++||+.+++.+..+.+|...|.+++| ++.+|++++.||.|++||
T Consensus 190 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEE
T ss_pred cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEE
Confidence 9999999999999999995 578999999999999999999999999999999999999 688999999999999999
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEE
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~La 253 (945)
+++++.+..+. .+...+.+++| ++.++++++.|+.|++||+.+++.+..+.+ |...+.++.+ ++.+|+
T Consensus 266 ~~~~~~~~~~~-------~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~ 333 (445)
T 2ovr_B 266 PETETCLHTLQ-------GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMEL--KDNILV 333 (445)
T ss_dssp GGGTEEEEEEC-------CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC-CCSCEEEEEE--ETTEEE
T ss_pred CCCCcEeEEec-------CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC-CcccEEEEEE--eCCEEE
Confidence 99998887765 34567888888 889999999999999999999999988876 8888888877 567999
Q ss_pred EEECCCeEEEEECCCCeeeeecc----CCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 254 TSSLDRQILIWDVGKKLDIDRQK----FDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 254 sgs~Dg~I~IWD~~~~~~i~~~~----~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
+++.||.|++||+.+++.+.... |...|++++|+ +++|++++.||.|++|++..+..
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCce
Confidence 99999999999999988877643 67889999996 57999999999999999887654
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=2.4e-31 Score=294.74 Aligned_cols=244 Identities=20% Similarity=0.266 Sum_probs=203.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-cccccccccccceEEEEEec--CCCEEEEEEcCCcEEEEEcC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSP--NSTCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-~~~~~l~~h~~~V~~la~sp--dg~~Lasgs~Dg~V~iwdl~ 91 (945)
+|...|++++|+|+|++|++++ .|++|+|||+.++. .....+.+|.+.|++++|++ ++.+|++|+.|++|++||+.
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs-~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCS-SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEE-TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred cccCeEEEeeEcCCCCEEEEEe-CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 6779999999999999999987 99999999987653 23456889999999999986 48999999999999999998
Q ss_pred CCe--eeeecccCCCCEEEEEEecC--CCEEEEEECCCcEEEEEcCCCeE---EEEEecCCCCEEEEEEccC--------
Q 002266 92 GGE--FQTNITRFTLPIRVLAFNKS--GSMLAAAGDDEGIKLINTIDGSI---ARVLKGHKGPVTGLAFDPN-------- 156 (945)
Q Consensus 92 ~g~--~~~~l~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~iwd~~~~~~---~~~l~~h~~~V~~lafspd-------- 156 (945)
++. ....+..|...|.+++|+|+ +.+|++|+.|+.|++||+..+.. ...+.+|...|.+++|+|+
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 873 45567789999999999997 78999999999999999987632 3445679999999999997
Q ss_pred ---------CCEEEEEeCCCcEEEEEccCCe---eeeeecccCCCCCCCCCCceEEEEcCCC----CEEEEEeCCCeEEE
Q 002266 157 ---------SEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGSDPSSMNVLSWSPDG----ETLAVPGLKNDVVM 220 (945)
Q Consensus 157 ---------g~~Las~s~Dg~I~iwDl~t~~---~i~~~~~~~~~~~~~~~~i~~l~~spdg----~~La~gs~dg~I~v 220 (945)
+.+|++++.|+.|++||++... .+..+ ..|...|.+++|+|++ .+|++++.|+.|++
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-------~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-------EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-------BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-------ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 4689999999999999997552 23222 3567889999999986 89999999999999
Q ss_pred EECCCCc----EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q 002266 221 YDRDTAE----KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG 267 (945)
Q Consensus 221 wD~~t~~----~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~ 267 (945)
|++.+.. ....+.. |...|.+++|+|+|++||+++.||.|+||+..
T Consensus 243 w~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLHK-FNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECSSTTCCCCBCCEEEE-CSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEccCccccchhhhhhhc-CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 9987631 1122233 77899999999999999999999999999975
No 78
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=2.1e-29 Score=292.05 Aligned_cols=274 Identities=18% Similarity=0.259 Sum_probs=244.1
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|.+++|+ +..|++++ .||.|++||+.++ .....+.+|...|.+++|+ +..|++|+.||.|++||+.+++
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~-~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGS-TDRTLKVWNAETG-ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEE-TTSCEEEEETTTT-EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC
T ss_pred CCCCCEEEEEec--CCEEEEEe-CCCeEEEEECCcC-cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc
Confidence 577999999997 66788876 9999999999876 4567788999999999996 5689999999999999999999
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl 174 (945)
....+..|...|.++.| ++.++++|+.|+.|++||+.++..+..+.+|...|.+++| ++.++++++.||.|++||+
T Consensus 231 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 231 CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEEC
Confidence 99999999999999999 7889999999999999999999999999999999999999 7889999999999999999
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC--CCCCCeEEEEEcCCCCEE
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG--DHVQPICFLSWSPNGKYM 252 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~--~h~~~I~~l~fSpdg~~L 252 (945)
++++.+..+.. +...+.++.+ ++++|++++.||.|++||+.+++.+..+.. .|...|++++|+ +++|
T Consensus 307 ~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l 375 (445)
T 2ovr_B 307 ETGNCIHTLTG-------HQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFV 375 (445)
T ss_dssp TTCCEEEEECC-------CCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEE
T ss_pred CCCCEEEEEcC-------CcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEE
Confidence 99988877653 3455666665 577999999999999999999998888764 377899999995 6899
Q ss_pred EEEECCCeEEEEECCCCeeeeec------cCCCCeeEEEEecCCCEEEEEEcCCe----EEEEecCC
Q 002266 253 ATSSLDRQILIWDVGKKLDIDRQ------KFDDRICCMAWKPIGNALAVIDVMGK----YGVWESVV 309 (945)
Q Consensus 253 asgs~Dg~I~IWD~~~~~~i~~~------~~~~~V~~la~spdg~~Las~s~DG~----I~iWd~~~ 309 (945)
++++.||.|+|||+.+++.+... .+...|++++|+|++.+|++++.||. |.+||...
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99999999999999999887765 56788999999999999999999998 99999864
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=2.4e-29 Score=292.57 Aligned_cols=274 Identities=16% Similarity=0.266 Sum_probs=236.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEe--cCCCEEEEEEcCCcEEEEEcCC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALS--PNSTCLASGSIDHSVKLYKFPG 92 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~s--pdg~~Lasgs~Dg~V~iwdl~~ 92 (945)
+|.+.|++++|+|++ .|++++ .||+|++||+.++ .....+.+|...|.+++|+ +++.+|++|+.||.|++||+.+
T Consensus 160 ~h~~~V~~l~~~~~~-~l~s~s-~dg~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~ 236 (464)
T 3v7d_B 160 GHDGGVWALKYAHGG-ILVSGS-TDRTVRVWDIKKG-CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 236 (464)
T ss_dssp CCSSCEEEEEECSTT-EEEEEE-TTSCEEEEETTTT-EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCC
T ss_pred CCCcCEEEEEEcCCC-EEEEEe-CCCCEEEEECCCC-cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCC
Confidence 677999999999988 777776 9999999999876 4567788899999999999 4778999999999999999987
Q ss_pred Cee-----------------------eeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEE
Q 002266 93 GEF-----------------------QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVT 149 (945)
Q Consensus 93 g~~-----------------------~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~ 149 (945)
+.. ...+..|...+.++ ++++.++++|+.|+.|++||+.+++.+..+.+|...|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 314 (464)
T 3v7d_B 237 ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY 314 (464)
T ss_dssp CCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEE
Confidence 652 34556677788776 57889999999999999999999999999999999999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Q 002266 150 GLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229 (945)
Q Consensus 150 ~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~ 229 (945)
+++|+|++++|++++.||.|++||+++++.+..+. .|...+.+++|+ +.+|++++.||.|++||+.++...
T Consensus 315 ~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 315 STIYDHERKRCISASMDTTIRIWDLENGELMYTLQ-------GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-------CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee
Confidence 99999999999999999999999999999888775 345778899997 689999999999999999998877
Q ss_pred EeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee--ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEe
Q 002266 230 FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR--QKFDDRICCMAWKPIGNALAVIDVMGKYGVWE 306 (945)
Q Consensus 230 ~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~--~~~~~~V~~la~spdg~~Las~s~DG~I~iWd 306 (945)
.... +...+..++|+|++++|++++ ||.|+|||+.+++.+.. ..+...|++++|+ ....+++++.+|.+.+|-
T Consensus 386 ~~~~--~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 386 FSYH--HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEE--CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred eeec--CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 6664 566788899999999999999 89999999999998875 5678899999998 334556667777666553
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-30 Score=289.56 Aligned_cols=251 Identities=19% Similarity=0.274 Sum_probs=213.6
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-cccccccccccceEEEEEecC--CCEEEEEEcCCcEEEEEcC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPN--STCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-~~~~~l~~h~~~V~~la~spd--g~~Lasgs~Dg~V~iwdl~ 91 (945)
+|...|++++|+|++++|++++ .||.|+||++.... .....+.+|...|++++|+++ +.+|++|+.||.|++||+.
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred CCcccEEEEEEcCCCCEEEEEE-CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 4559999999999999999987 89999999986322 445667889999999999987 8999999999999999999
Q ss_pred CCe--eeeecccCCCCEEEEEEecC--CCEEEEEECCCcEEEEEcCCCe--EEEEEecCCCCEEEEEEcc----------
Q 002266 92 GGE--FQTNITRFTLPIRVLAFNKS--GSMLAAAGDDEGIKLINTIDGS--IARVLKGHKGPVTGLAFDP---------- 155 (945)
Q Consensus 92 ~g~--~~~~l~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~iwd~~~~~--~~~~l~~h~~~V~~lafsp---------- 155 (945)
+++ ....+..|...|.+++|+|+ +.+|++++.|+.|++||+..+. ....+..|...|.+++|+|
T Consensus 88 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 88 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--------
T ss_pred CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccccc
Confidence 987 66777788999999999999 9999999999999999998873 4556778999999999999
Q ss_pred ---CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC---CCEEEEEeCCCeEEEEECCCCc--
Q 002266 156 ---NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD---GETLAVPGLKNDVVMYDRDTAE-- 227 (945)
Q Consensus 156 ---dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd---g~~La~gs~dg~I~vwD~~t~~-- 227 (945)
++.+|++++.||.|++||++++........ ....|...+.+++|+|+ +.+|++++.||.|++||+.++.
T Consensus 168 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 168 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLES---TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp --CTTCEEEEEETTSCEEEEEEETTTTEEEEEE---EECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred CCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE---EEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence 699999999999999999987753322211 12246678999999999 8999999999999999999864
Q ss_pred --EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q 002266 228 --KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 228 --~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~ 269 (945)
........|...|++++|+|+|++|++++.||.|+||++...
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 122222237889999999999999999999999999998753
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.4e-30 Score=322.64 Aligned_cols=208 Identities=10% Similarity=0.105 Sum_probs=176.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
||...|++++|+|+|++||+++ .||.|+||+..... .. ....|...|.+++|+| |++|++++.|++|++||+.+++
T Consensus 15 gh~~~V~~lafspdg~~lAsgs-~Dg~I~lw~~~~~~-~~-~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIAT-VTGEVHIYGQQQVE-VV-IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEE-TTSEEEEECSTTCE-EE-EECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred CCCCCcEEEEECCCCCEEEEEe-CCCEEEEEeCCCcE-EE-EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 7889999999999999999987 99999999976542 22 2234788999999999 8899999999999999999998
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEE-----------EEEecCCCCEEEEEEccC-CCEEEE
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA-----------RVLKGHKGPVTGLAFDPN-SEYLAS 162 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~-----------~~l~~h~~~V~~lafspd-g~~Las 162 (945)
.+..+. +...|++++|+|++++|++|+.||.|++||+.++... ..+.+|.+.|.+++|+|+ +..|++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 887775 6789999999999999999999999999999988753 123568899999999996 478999
Q ss_pred EeCCCcEEEEEccCCeeeeeecccCC-----------CCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Q 002266 163 IDSIGTVIYWELQSGRELHNLKRVAP-----------DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 163 ~s~Dg~I~iwDl~t~~~i~~~~~~~~-----------~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
++.||.| +||+++++.+..+..+.. ....|...|.+++|+|+|++|++++.|+.|++||+++++.
T Consensus 170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999 999999988877754311 0112346799999999999999999999999999876554
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-29 Score=281.76 Aligned_cols=257 Identities=20% Similarity=0.254 Sum_probs=228.2
Q ss_pred cccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC
Q 002266 54 PKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133 (945)
Q Consensus 54 ~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~ 133 (945)
...+.+|...|++++|+|++++|++|+.||.|++|++.+++....+..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEecCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEEccCCeeeeeecccC----CCCCCCCC--CceEEEE
Q 002266 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-----GTVIYWELQSGRELHNLKRVA----PDIGSDPS--SMNVLSW 202 (945)
Q Consensus 134 ~~~~~~~l~~h~~~V~~lafspdg~~Las~s~D-----g~I~iwDl~t~~~i~~~~~~~----~~~~~~~~--~i~~l~~ 202 (945)
+++.+..+. +...|.+++|+|++.+|++++.+ |.|++||+........+.... .....+.. .+.+++|
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999888887 88999999999999999999998 999999998764332221110 01112223 7899999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCC-CcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCe
Q 002266 203 SPDGETLAVPGLKNDVVMYDRDT-AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRI 281 (945)
Q Consensus 203 spdg~~La~gs~dg~I~vwD~~t-~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V 281 (945)
+|++++|++++.+|.|++||+.+ ...+..+.. |...|.+++|+|++++|++++.||.|++||+.++..+....+...+
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 262 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL 262 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCc
Confidence 99999999999999999999998 677777776 8899999999999999999999999999999999999888888999
Q ss_pred eEEEEecCCCEEEEEEcCC--------------eEEEEecCCCCC
Q 002266 282 CCMAWKPIGNALAVIDVMG--------------KYGVWESVVPSS 312 (945)
Q Consensus 282 ~~la~spdg~~Las~s~DG--------------~I~iWd~~~~~~ 312 (945)
.+++|+|+++++++++.++ .+++|+...+..
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 9999999999999999998 899999876654
No 83
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=319.28 Aligned_cols=290 Identities=11% Similarity=0.142 Sum_probs=230.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
.|...|.+++|+| |++|++++ .|++|+|||+.++. ....+. |...|++++|+|++++|++|+.||.|++||+.++.
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s-~D~~v~lWd~~~~~-~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVIN-AKDTVYVLSLYSQK-VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEE-TTCEEEEEETTTCS-EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCCEEEEEEcC-CCEEEEEE-CcCeEEEEECCCCc-EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 4668999999999 88888886 99999999998764 334443 66899999999999999999999999999999887
Q ss_pred ee-----------eecccCCCCEEEEEEecC-CCEEEEEECCCcEEEEEcCCCeEEEEEecC------------------
Q 002266 95 FQ-----------TNITRFTLPIRVLAFNKS-GSMLAAAGDDEGIKLINTIDGSIARVLKGH------------------ 144 (945)
Q Consensus 95 ~~-----------~~l~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h------------------ 144 (945)
.. ..+..|..+|.+++|+|+ +..|++|+.|+.| +||+++++....+..|
T Consensus 132 ~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 132 LSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred cccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccccc
Confidence 53 234568889999999996 5789999999999 9999999988888765
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeee--ec--------------------------cc---CC-----
Q 002266 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHN--LK--------------------------RV---AP----- 188 (945)
Q Consensus 145 ~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~--~~--------------------------~~---~~----- 188 (945)
...|.+++|+|+|.+|++++.||.|++||+++++.+.. +. .. .+
T Consensus 211 ~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~l 290 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSL 290 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEE
Confidence 57899999999999999999999999999977654321 00 00 00
Q ss_pred -------------C----------------------------------C--C-------------------C--------
Q 002266 189 -------------D----------------------------------I--G-------------------S-------- 192 (945)
Q Consensus 189 -------------~----------------------------------~--~-------------------~-------- 192 (945)
. . . .
T Consensus 291 l~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~ 370 (902)
T 2oaj_A 291 LISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLI 370 (902)
T ss_dssp EEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEE
T ss_pred EEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEE
Confidence 0 0 0 0
Q ss_pred -----------------------------CCCCceE----------------------------------EEEcCCCCEE
Q 002266 193 -----------------------------DPSSMNV----------------------------------LSWSPDGETL 209 (945)
Q Consensus 193 -----------------------------~~~~i~~----------------------------------l~~spdg~~L 209 (945)
+...+++ ++|+|+|++|
T Consensus 371 s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~l 450 (902)
T 2oaj_A 371 LGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAF 450 (902)
T ss_dssp ETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEE
T ss_pred cCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEE
Confidence 0001111 2346778899
Q ss_pred EEEeCCCeEEEEECCCCcEE----Eee--c----CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe---------
Q 002266 210 AVPGLKNDVVMYDRDTAEKL----FSL--R----GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL--------- 270 (945)
Q Consensus 210 a~gs~dg~I~vwD~~t~~~~----~~~--~----~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~--------- 270 (945)
++|+.|++|++||+.++... ..+ . ..|...|.+++|+|+|++||+|+.||+|+|||+.+++
T Consensus 451 aSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~ 530 (902)
T 2oaj_A 451 ITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPE 530 (902)
T ss_dssp EEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------
T ss_pred EEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCC
Confidence 99999999999999876421 111 1 1488899999999999999999999999999997652
Q ss_pred ------------------------------------eeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCC
Q 002266 271 ------------------------------------DIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 271 ------------------------------------~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~ 310 (945)
++.. ..|...|++++|+|+| +||+|+.||+|++||+..+
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 531 SGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp -------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred CcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 1222 4588999999999999 9999999999999997544
No 84
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=2.5e-29 Score=281.91 Aligned_cols=249 Identities=12% Similarity=0.121 Sum_probs=218.1
Q ss_pred cccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe--eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC
Q 002266 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE--FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133 (945)
Q Consensus 56 ~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~--~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~ 133 (945)
.+..|..+|++++|+|++++|++++.|+.|++|++.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 345688999999999999999999999999999999887 778888899999999999999999999999999999998
Q ss_pred CCeEEEE--EecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEE
Q 002266 134 DGSIARV--LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211 (945)
Q Consensus 134 ~~~~~~~--l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~ 211 (945)
+++.... +..|...|.+++|+|++++|++++.||.|++||+..+......... ...+...+.+++|+|++++|++
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI---KKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE---CTTCCSCEEEEEECTTSSEEEE
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee---ecccCCCeeEEEEcCCCCEEEE
Confidence 8875444 3678999999999999999999999999999999987632222111 1245678999999999999999
Q ss_pred EeCCCeEEEEEC------------------CCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeee
Q 002266 212 PGLKNDVVMYDR------------------DTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDID 273 (945)
Q Consensus 212 gs~dg~I~vwD~------------------~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~ 273 (945)
++.|+.|++||+ ..++.+..+.. |...|.+++|+|++.+|++++.||.|++||+.+++.+.
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 999999999995 36677777775 88999999999999999999999999999999888776
Q ss_pred e-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 274 R-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 274 ~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
. ..|...|.+++|+|++.+|+++ .||.|++|++..
T Consensus 239 ~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 239 TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 6 4567799999999999888877 999999999875
No 85
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=3.3e-29 Score=307.83 Aligned_cols=251 Identities=19% Similarity=0.287 Sum_probs=221.8
Q ss_pred ccccccccceEEEEEecCC-CEEEEEEcCCcEEEEEcCCC-----eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEE
Q 002266 55 KILRHHRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGG-----EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128 (945)
Q Consensus 55 ~~l~~h~~~V~~la~spdg-~~Lasgs~Dg~V~iwdl~~g-----~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~ 128 (945)
..+.+|.+.|++|+|+|++ ++|++|+.|++|++|++.+. .....+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 3567899999999999864 79999999999999998753 34567888999999999999999999999999999
Q ss_pred EEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC--
Q 002266 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG-- 206 (945)
Q Consensus 129 iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg-- 206 (945)
|||+.++.....+.+|...|.+++|+|++.+|++++.|++|++||+......... .....|...|.+++|+|++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS----EGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC----SSTTSCSSCEEEEEECSCSSS
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec----cCCCCCCCcEEEEEEeCCCCc
Confidence 9999999999999999999999999999999999999999999998665433222 1223566789999999986
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEE
Q 002266 207 ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAW 286 (945)
Q Consensus 207 ~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~ 286 (945)
..|++++.|+.|++||+++++....+.+ |...|++++|+|+|++|++|+.||.|+|||+.+++.+....+...|.+++|
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 610 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAG-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF 610 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEE
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEE
Confidence 6899999999999999999998888877 999999999999999999999999999999999999888878889999999
Q ss_pred ecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 287 KPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 287 spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
+|++.+|++++ ++.|++||+....
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKS 634 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred cCCCcEEEEEc-CCCEEEEECCCCC
Confidence 99998887765 5669999986543
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.9e-29 Score=290.66 Aligned_cols=281 Identities=11% Similarity=0.057 Sum_probs=229.7
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcc--cccccc-------------------------------------
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSN--LPKILR------------------------------------- 58 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~--~~~~l~------------------------------------- 58 (945)
.+|.+++|+|+|++|+++ .++.|++||+.++.. ....+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~--~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI--IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEE--ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE--eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 458899999999976665 478999999876640 111111
Q ss_pred -----------------ccccceEEEEEecCCCEE-EEEEcCCcEEEEEcC--CCeeeeecc--cCCCCEEEEEEecCCC
Q 002266 59 -----------------HHRDGVTALALSPNSTCL-ASGSIDHSVKLYKFP--GGEFQTNIT--RFTLPIRVLAFNKSGS 116 (945)
Q Consensus 59 -----------------~h~~~V~~la~spdg~~L-asgs~Dg~V~iwdl~--~g~~~~~l~--~~~~~V~~l~fspdg~ 116 (945)
.|.+.|++++|+|++++| ++|+.||.|++|++. +++....+. .+...|.+++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 344579999999999996 888899999999998 787777765 5678999999999999
Q ss_pred EEEEEECCCcEEEEEcCCCeEEE----EEecCCCCEEEEEEccC---CCEEEEEeCCCcEEEEEccCCeeeeeecccCCC
Q 002266 117 MLAAAGDDEGIKLINTIDGSIAR----VLKGHKGPVTGLAFDPN---SEYLASIDSIGTVIYWELQSGRELHNLKRVAPD 189 (945)
Q Consensus 117 ~Lasgs~Dg~I~iwd~~~~~~~~----~l~~h~~~V~~lafspd---g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~ 189 (945)
+|++|+.+|.|++|++.++.... .+.+|...|.+++|+|+ +.+|++++.|+.|++||+.++..+..+.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~----- 237 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL----- 237 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC-----
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee-----
Confidence 99999999999999998876543 67889999999999999 9999999999999999999887766532
Q ss_pred CCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC------------------------CCCCCeEEEEE
Q 002266 190 IGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG------------------------DHVQPICFLSW 245 (945)
Q Consensus 190 ~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~------------------------~h~~~I~~l~f 245 (945)
..|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+.. .....|..++|
T Consensus 238 -~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 238 -FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp -CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred -cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 1456789999999 999999999999999999999998777652 13457899999
Q ss_pred cCCCCEEEEEE-CCCeEEEEEC--CCC---eeeeeccCCCCeeEEEEecCCCEEEEEEc-------CCeEEEEecC
Q 002266 246 SPNGKYMATSS-LDRQILIWDV--GKK---LDIDRQKFDDRICCMAWKPIGNALAVIDV-------MGKYGVWESV 308 (945)
Q Consensus 246 Spdg~~Lasgs-~Dg~I~IWD~--~~~---~~i~~~~~~~~V~~la~spdg~~Las~s~-------DG~I~iWd~~ 308 (945)
+|++++|++++ .|+.|+||++ .++ ..+........|.+++|+|++ .+++++. +..|.+|.+.
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEE
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEE
Confidence 99999999999 8999999999 555 555555445889999999954 4444432 4557888764
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=5.9e-29 Score=309.79 Aligned_cols=282 Identities=16% Similarity=0.226 Sum_probs=244.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g- 93 (945)
+|...|++++|+|+|++|++++ .||.|+|||+.++ .....+.+|...|++++|+|++.+|++++.||.|++|++.++
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTG-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS
T ss_pred cCCCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCCC-cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc
Confidence 5779999999999999999997 8999999999876 456677889999999999999999999999999999999886
Q ss_pred eeeeecccCCCCEEEEEEec-CCCEEEEEECCCcEEEEEcCCCeEEEEEecCC-CCEEEEEEcc--CCCEEEEEeCCCcE
Q 002266 94 EFQTNITRFTLPIRVLAFNK-SGSMLAAAGDDEGIKLINTIDGSIARVLKGHK-GPVTGLAFDP--NSEYLASIDSIGTV 169 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~-~~V~~lafsp--dg~~Las~s~Dg~I 169 (945)
.....+..|...|.+++|+| ++..|++++.||.|++||+.++.....+..+. ..|.+++|+| ++.+|++++.||.|
T Consensus 131 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 210 (814)
T 3mkq_A 131 ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (814)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEE
T ss_pred eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEE
Confidence 66777888999999999999 88999999999999999999888777776655 8999999999 99999999999999
Q ss_pred EEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCC
Q 002266 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNG 249 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg 249 (945)
++||+.+++.+..+. .+...+.+++|+|+|.+|++++.||.|++||+.+++.+..+.. +...+.+++|+|+|
T Consensus 211 ~~~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 211 KIWDYQTKSCVATLE-------GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-GLERSWCIATHPTG 282 (814)
T ss_dssp EEEETTTTEEEEEEE-------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC-SSSSEEEEEECTTC
T ss_pred EEEECCCCcEEEEEc-------CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec-CCCcEEEEEEccCC
Confidence 999999998877765 3456789999999999999999999999999999999888876 78899999999998
Q ss_pred C--EEEEEECCCeEEEEECCCCe----------eeee----------------------------------ccCCCCeeE
Q 002266 250 K--YMATSSLDRQILIWDVGKKL----------DIDR----------------------------------QKFDDRICC 283 (945)
Q Consensus 250 ~--~Lasgs~Dg~I~IWD~~~~~----------~i~~----------------------------------~~~~~~V~~ 283 (945)
. ++++++ ++.+.+|++.... .+.. ..+...+.+
T Consensus 283 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (814)
T 3mkq_A 283 RKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQS 361 (814)
T ss_dssp GGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSE
T ss_pred CceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCce
Confidence 7 455555 7778999875432 1110 112345789
Q ss_pred EEEecCCCEEEEEEcCCeEEEEecC
Q 002266 284 MAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 284 la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
++|+|+|++|++++ +|.+.+|+..
T Consensus 362 ~~~spdg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 362 LAHSPNGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEETT
T ss_pred eEECCCCCEEEEec-CCEEEEEECc
Confidence 99999999999988 8999999963
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.1e-29 Score=283.60 Aligned_cols=241 Identities=18% Similarity=0.272 Sum_probs=207.7
Q ss_pred CCCCEEEEEECCC----CCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEec-CCCEEEEEEcCCcEEEEEc
Q 002266 16 NAASFCSILWDQQ----AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSP-NSTCLASGSIDHSVKLYKF 90 (945)
Q Consensus 16 h~~~V~svafspd----g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~sp-dg~~Lasgs~Dg~V~iwdl 90 (945)
|...|++++|+|+ |++|++++ .||.|+|||+.+. .....+.+|...|.+++|+| ++.+|++|+.||.|++||+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAG-SRGIIRIINPITM-QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEE-TTCEEEEECTTTC-CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEeccCCCCCCCEEEEec-CCCEEEEEEchhc-eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 6688999999999 66888876 9999999999876 45667788999999999999 9999999999999999999
Q ss_pred CCCeeeeec---ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE--------------------------
Q 002266 91 PGGEFQTNI---TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL-------------------------- 141 (945)
Q Consensus 91 ~~g~~~~~l---~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l-------------------------- 141 (945)
.+++....+ ..|...|.+++|+|++.+|++++.|+.|++||+++++....+
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred ecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 999888877 678999999999999999999999999999999876543332
Q ss_pred --ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCee--------------eeeecccCCCCCCCCCCceEEEEcCC
Q 002266 142 --KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE--------------LHNLKRVAPDIGSDPSSMNVLSWSPD 205 (945)
Q Consensus 142 --~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~--------------i~~~~~~~~~~~~~~~~i~~l~~spd 205 (945)
..|...|.+++|+ +++|++++.||.|++||+.++.. +..+. .+...+.+++|+|+
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~ 296 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-------YSQCDIWYMRFSMD 296 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-------CSSCCSSCCCCEEC
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-------ccCCcEEEEEEcCC
Confidence 2399999999999 77999999999999999987643 22222 34567888999999
Q ss_pred --CCEEEEEeCCCeEEEEECCCCc----EEEeecCCC--CCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 206 --GETLAVPGLKNDVVMYDRDTAE----KLFSLRGDH--VQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 206 --g~~La~gs~dg~I~vwD~~t~~----~~~~~~~~h--~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
+++|++++.||.|++||+.+++ ....+.. | ...|++++|+|+|++|++++.||.|+|||+.+
T Consensus 297 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 297 FWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH-HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp TTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC-TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCcEEEEEecCCcEEEEECCCCCCccccceEEcc-cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999999999999875 3345554 4 78999999999999999999999999999853
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5e-29 Score=285.14 Aligned_cols=247 Identities=17% Similarity=0.297 Sum_probs=213.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC-CC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP-GG 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~-~g 93 (945)
+|...|++++|+|+|++|++++ .||.|+|||+.++ .....+.+|...|.+++|+ +.+|++|+.||.|++||+. .+
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~-~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~ 207 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGL-GNGLVDIYDVESQ-TKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN 207 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC-CEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS
T ss_pred CCCCCEEEEEECCCCCEEEEEC-CCCeEEEEECcCC-eEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc
Confidence 4678999999999999999987 8999999999876 4566778999999999994 5799999999999999998 46
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCC-EEEEEe--CCCcEE
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE-YLASID--SIGTVI 170 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~-~Las~s--~Dg~I~ 170 (945)
.....+..|...|.+++|+|++.+|++|+.|+.|++||+.++.....+..|...|.+++|+|++. ++++++ .||.|+
T Consensus 208 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 208 HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 66778888999999999999999999999999999999999999999999999999999999765 556654 699999
Q ss_pred EEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEE--EeCCCeEEEEECCCCcEEE--eecCCCCCCeEEEEEc
Q 002266 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV--PGLKNDVVMYDRDTAEKLF--SLRGDHVQPICFLSWS 246 (945)
Q Consensus 171 iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~--gs~dg~I~vwD~~t~~~~~--~~~~~h~~~I~~l~fS 246 (945)
+||+.+++.+..+.. ...+.+++|+|++++|++ |+.+|.|++||+.++.... .+.+ |...|.+++|+
T Consensus 288 i~d~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~-h~~~v~~~~~s 358 (401)
T 4aez_A 288 FWNAATGARVNTVDA--------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA-HDTRVLYSALS 358 (401)
T ss_dssp EEETTTCCEEEEEEC--------SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC-CSSCCCEEEEC
T ss_pred EEECCCCCEEEEEeC--------CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecC-CCCCEEEEEEC
Confidence 999999988777642 356899999999999999 4489999999999865443 3555 88999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeeeee
Q 002266 247 PNGKYMATSSLDRQILIWDVGKKLDIDR 274 (945)
Q Consensus 247 pdg~~Lasgs~Dg~I~IWD~~~~~~i~~ 274 (945)
|+|++|++++.||.|+||++.+++.+..
T Consensus 359 ~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 359 PDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp TTSSEEEEECTTSEEEEEECCC------
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 9999999999999999999999877655
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=3.1e-28 Score=269.45 Aligned_cols=250 Identities=18% Similarity=0.259 Sum_probs=220.9
Q ss_pred ccccccccccceEEEEEecC-CCEEEEEEcCCcEEEEEcCCCe-----eeeecccCCCCEEEEEEecCCCEEEEEECCCc
Q 002266 53 LPKILRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPGGE-----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEG 126 (945)
Q Consensus 53 ~~~~l~~h~~~V~~la~spd-g~~Lasgs~Dg~V~iwdl~~g~-----~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~ 126 (945)
+..++.+|.+.|++|+|+|+ +++|+||+.|++|+|||+.+.+ ....+.+|...|.+++|+|++++|++++.|+.
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence 44578899999999999997 6899999999999999987643 45667889999999999999999999999999
Q ss_pred EEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCC
Q 002266 127 IKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDG 206 (945)
Q Consensus 127 I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg 206 (945)
|++|+............+...+..+.+++++.+|++++.|+.+++||+......... ...+...+..++|++++
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~------~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ------DESHSEWVSCVRFSPNS 183 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC------SSSCSSCEEEEEECSCS
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE------eccccCcccceEEccCC
Confidence 999999999988888889999999999999999999999999999998776543322 12456778899998854
Q ss_pred --CEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEE
Q 002266 207 --ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCM 284 (945)
Q Consensus 207 --~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~l 284 (945)
.++++++.|+.|++||+.+++.+..+.+ |...|++++|+|+|++|++|+.||.|+|||+.+...+....+...|.++
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~ 262 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINAL 262 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEee
Confidence 5788999999999999999999888877 9999999999999999999999999999999999999888888899999
Q ss_pred EEecCCCEEEEEEcCCeEEEEecCCC
Q 002266 285 AWKPIGNALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 285 a~spdg~~Las~s~DG~I~iWd~~~~ 310 (945)
+|+|++.+ ++++.|+.|++|++...
T Consensus 263 ~~~~~~~~-~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 263 CFSPNRYW-LCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EECSSSSE-EEEEETTEEEEEETTTT
T ss_pred ecCCCCce-eeccCCCEEEEEECCCC
Confidence 99998764 55667999999997643
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.3e-29 Score=285.53 Aligned_cols=253 Identities=15% Similarity=0.154 Sum_probs=216.5
Q ss_pred CCCCCEEEEEECCC----C---CEEEEEEcCCCeEEEEcCCCCccc----ccccccc-----ccceEEEEEe----cCCC
Q 002266 15 GNAASFCSILWDQQ----A---HHLVTASSSETTISIHDPLLPSNL----PKILRHH-----RDGVTALALS----PNST 74 (945)
Q Consensus 15 gh~~~V~svafspd----g---~~L~t~g~~dg~V~IWd~~~~~~~----~~~l~~h-----~~~V~~la~s----pdg~ 74 (945)
+|...|++++|+|+ | ++|++++ .|+.|++|++.+.... ...+..| ...|.+++|+ |++.
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTS-FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEE-TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEc-CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc
Confidence 67799999999999 9 9999887 8999999998765320 4566677 5899999999 9999
Q ss_pred E-EEEEEcCCcEEEEEcCC------Ceeee-----ec-------ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC
Q 002266 75 C-LASGSIDHSVKLYKFPG------GEFQT-----NI-------TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG 135 (945)
Q Consensus 75 ~-Lasgs~Dg~V~iwdl~~------g~~~~-----~l-------~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~ 135 (945)
+ |++++.||.|++||+.+ ++... .+ ..|...|.+++|+|++ +|++++.|+.|++||++++
T Consensus 139 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 217 (397)
T 1sq9_A 139 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL 217 (397)
T ss_dssp EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT
T ss_pred eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC
Confidence 9 99999999999999988 65554 55 4478899999999999 9999999999999999999
Q ss_pred eEEEEEec---C---CCCEEEEEEccCCCEEEEEeCC---CcEEEEEccCCeeeeeecccCCC------CCCCCCCceEE
Q 002266 136 SIARVLKG---H---KGPVTGLAFDPNSEYLASIDSI---GTVIYWELQSGRELHNLKRVAPD------IGSDPSSMNVL 200 (945)
Q Consensus 136 ~~~~~l~~---h---~~~V~~lafspdg~~Las~s~D---g~I~iwDl~t~~~i~~~~~~~~~------~~~~~~~i~~l 200 (945)
..+..+.. | ...|.+++|+|++.+|++++.| |.|++||+++++.+..+...... ...+...+.++
T Consensus 218 ~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 297 (397)
T 1sq9_A 218 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 297 (397)
T ss_dssp EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE
T ss_pred ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEE
Confidence 99999998 9 9999999999999999999999 99999999999887777541100 00156789999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec------CCC---------------CCCeEEEEEcCCC----------
Q 002266 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR------GDH---------------VQPICFLSWSPNG---------- 249 (945)
Q Consensus 201 ~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~------~~h---------------~~~I~~l~fSpdg---------- 249 (945)
+|+|++++|++++.|+.|++||+.+++.+..+. . | ...|.+++|+|+|
T Consensus 298 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 376 (397)
T 1sq9_A 298 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE-IEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN 376 (397)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS-SGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTS
T ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCccc-chhhhhccccccccccCCceeEEEecccccccccccccc
Confidence 999999999999999999999999999988887 5 6 8999999999998
Q ss_pred CEEEEEECCCeEEEEECCCCe
Q 002266 250 KYMATSSLDRQILIWDVGKKL 270 (945)
Q Consensus 250 ~~Lasgs~Dg~I~IWD~~~~~ 270 (945)
++|++++.||.|+||++.+++
T Consensus 377 ~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 377 ESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CEEEEEETTTEEEEEEEEC--
T ss_pred ceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998763
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.4e-30 Score=291.99 Aligned_cols=244 Identities=13% Similarity=0.132 Sum_probs=203.7
Q ss_pred cccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC--eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC
Q 002266 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG--EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133 (945)
Q Consensus 56 ~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g--~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~ 133 (945)
....|.++|++++|+|++++|++|+.|+.|++|++.++ +....+..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34456789999999999999999999999999999988 7778888999999999999999999999999999999999
Q ss_pred CCe---EEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCee---eeeecccCCCCCCCCCCceEEEEcCCCC
Q 002266 134 DGS---IARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE---LHNLKRVAPDIGSDPSSMNVLSWSPDGE 207 (945)
Q Consensus 134 ~~~---~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~---i~~~~~~~~~~~~~~~~i~~l~~spdg~ 207 (945)
++. ....+..|...|.+++|+|++++|++++.||.|++||+++++. ...+.. .|...+.+++|+|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR------PLRSTILSLDWHPNNV 159 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS------SCCSCEEEEEECTTSS
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec------ccCCCeEEEEEcCCCC
Confidence 876 6677888999999999999999999999999999999988763 333321 2568899999999999
Q ss_pred EEEEEeCCCeEEEEECC------------------CCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q 002266 208 TLAVPGLKNDVVMYDRD------------------TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 208 ~La~gs~dg~I~vwD~~------------------t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~ 269 (945)
+|++++.|+.|++||+. .++.+..+ .|...|.+++|+|+|++|++++.||.|+|||+.++
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 99999999999999985 34455566 48999999999999999999999999999999988
Q ss_pred ee----eee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 270 LD----IDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 270 ~~----i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.. +.. ..|...|.+++|+|++++|++++.++.+ +|+..
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 238 EQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 76 333 5678899999999999999888766655 77654
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=4.1e-29 Score=288.07 Aligned_cols=250 Identities=12% Similarity=0.218 Sum_probs=206.3
Q ss_pred ccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe-----------eeeecccCC------------CCEEEEEEecCC
Q 002266 59 HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE-----------FQTNITRFT------------LPIRVLAFNKSG 115 (945)
Q Consensus 59 ~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~-----------~~~~l~~~~------------~~V~~l~fspdg 115 (945)
.|.+.|++++|+|+|++|++|+.||.|+||++.+++ ....+..|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999998776 466778887 889999999998
Q ss_pred --CEEEEEECCCcEEEEEcCCCeEE---------------------------------------EE-EecCCCCEEEEEE
Q 002266 116 --SMLAAAGDDEGIKLINTIDGSIA---------------------------------------RV-LKGHKGPVTGLAF 153 (945)
Q Consensus 116 --~~Lasgs~Dg~I~iwd~~~~~~~---------------------------------------~~-l~~h~~~V~~laf 153 (945)
.+|++++.|+.|++||+.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 89999999999999998764431 12 3579999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEccC-CeeeeeecccCCCCCCCCCCceEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE---
Q 002266 154 DPNSEYLASIDSIGTVIYWELQS-GRELHNLKRVAPDIGSDPSSMNVLSWSPDG-ETLAVPGLKNDVVMYDRDTAEK--- 228 (945)
Q Consensus 154 spdg~~Las~s~Dg~I~iwDl~t-~~~i~~~~~~~~~~~~~~~~i~~l~~spdg-~~La~gs~dg~I~vwD~~t~~~--- 228 (945)
+|++++|+++ .||.|++||+++ +..+..+.........+...+.+++|+|++ ++|++++.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999984 344443322222344567889999999998 9999999999999999998876
Q ss_pred -EEeecCCCCC------------CeEEEEEcCCCCEEEEEECCCeEEEEECCC-CeeeeeccCCCC--------------
Q 002266 229 -LFSLRGDHVQ------------PICFLSWSPNGKYMATSSLDRQILIWDVGK-KLDIDRQKFDDR-------------- 280 (945)
Q Consensus 229 -~~~~~~~h~~------------~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~-~~~i~~~~~~~~-------------- 280 (945)
+..+.. |.. .|.+++|+|+|++|++++. +.|+|||+.+ +..+........
T Consensus 265 ~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 265 HSKLFEE-PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TCEEECC-C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred eeeEecc-CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 566665 554 8999999999999999998 9999999987 666655432222
Q ss_pred --eeEEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 281 --ICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 281 --V~~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
+..++|+|++++|++++.||.|++||+..+.
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 3349999999999999999999999987543
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=3.9e-29 Score=278.36 Aligned_cols=252 Identities=17% Similarity=0.219 Sum_probs=210.5
Q ss_pred CCCCCEEEEEECCC---CCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEE------ecCCCEEEEEEcCCcE
Q 002266 15 GNAASFCSILWDQQ---AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALAL------SPNSTCLASGSIDHSV 85 (945)
Q Consensus 15 gh~~~V~svafspd---g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~------spdg~~Lasgs~Dg~V 85 (945)
+|...|.+++|+|+ |.+|++++ .||.|++||+.+.......+.+|...|.+++| +|++++|++++.||.|
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGD-FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEE-TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred cccCcEEEEEEcCCCCCCceEEEec-CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 56689999999999 68888887 89999999998875467788899999999965 6789999999999999
Q ss_pred EEEEcCCCe-eeeecccCCC----CEEEEE----EecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEcc-
Q 002266 86 KLYKFPGGE-FQTNITRFTL----PIRVLA----FNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP- 155 (945)
Q Consensus 86 ~iwdl~~g~-~~~~l~~~~~----~V~~l~----fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafsp- 155 (945)
++||+.++. ....+..+.. .+.+++ |++++.+|++++.|+.|++||++++.... ...|...|.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCC
Confidence 999998876 5556654443 799998 67899999999999999999999988754 466889999999999
Q ss_pred --CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCC-EEEEEeCCCeEEEEECCCC------
Q 002266 156 --NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE-TLAVPGLKNDVVMYDRDTA------ 226 (945)
Q Consensus 156 --dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~-~La~gs~dg~I~vwD~~t~------ 226 (945)
++.+|++++.||.|++||++++.....+... ....+...+.+++|+|++. +|++++.||.|++||+..+
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASV--SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE--EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeee--ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 9999999999999999999887654443311 1124567899999999998 8999999999999998754
Q ss_pred -------------cEEEeecCCCCCCeEEEEEcCCCCEEE-EEECCCeEEEEECCCCee
Q 002266 227 -------------EKLFSLRGDHVQPICFLSWSPNGKYMA-TSSLDRQILIWDVGKKLD 271 (945)
Q Consensus 227 -------------~~~~~~~~~h~~~I~~l~fSpdg~~La-sgs~Dg~I~IWD~~~~~~ 271 (945)
+.+..+.. |...|++++|+|+|++|+ +++.||.|+|||+.+...
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVTL-STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEEC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCCccccccccceeecccc-CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 34556665 889999999999999998 899999999999987653
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.5e-29 Score=292.80 Aligned_cols=264 Identities=10% Similarity=0.075 Sum_probs=216.5
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeee
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~ 96 (945)
...|.+|+|+|||+++|+++ .|++|+ |... ...+.+|...|.+++|+|+| .++.+.+|+.... ..
T Consensus 15 ~~~v~sv~~SpDG~~iASas-~D~TV~--d~~~----~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~ 79 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTF-PDISIG--QPKY----AKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GL 79 (588)
T ss_dssp SSSSCCEEECTTSCEEEECS-SSEEEE--EECC----CSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CS
T ss_pred hccEEEEEECCCCCEEEEEc-CCceee--cccc----cceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eE
Confidence 37799999999999999986 999999 6433 34557999999999999998 4565555553322 22
Q ss_pred eecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCC-----CEEEEEEccCCCEEEEEeCCCcEEE
Q 002266 97 TNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKG-----PVTGLAFDPNSEYLASIDSIGTVIY 171 (945)
Q Consensus 97 ~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~-----~V~~lafspdg~~Las~s~Dg~I~i 171 (945)
..+ .+...|.+++|+|+|.+||+++.||.|++||... .+..+. |.. .|.+++|+|+|++|++|+.||+|+|
T Consensus 80 ~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 80 LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 233 3478899999999999999999999999999543 566666 665 4999999999999999999999999
Q ss_pred EEccCCee-------eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE---EEeecCCCCCCeE
Q 002266 172 WELQSGRE-------LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK---LFSLRGDHVQPIC 241 (945)
Q Consensus 172 wDl~t~~~-------i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~---~~~~~~~h~~~I~ 241 (945)
||+.++.. +..+... ..+|...|.+++|+|+| +++++.|+.|++||+..... ..++...|...|.
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~---~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLS---DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECS---CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EECCCCccccccceeeeeeecc---cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEE
Confidence 99988742 3444321 23466899999999999 78888899999999988773 3456434888999
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCee-eeeccCCCCeeEEEE--ecCCCEEEEEEcCCeEEEEecC
Q 002266 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLD-IDRQKFDDRICCMAW--KPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 242 ~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~-i~~~~~~~~V~~la~--spdg~~Las~s~DG~I~iWd~~ 308 (945)
+++|+ |.+||+++ ++.|++||+.++.. ....+|...|.+++| +|++..|++++.+|+ ++|...
T Consensus 231 svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 231 DLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999 68999987 69999999999888 445589999999999 999999999999999 999865
No 96
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.3e-28 Score=284.73 Aligned_cols=245 Identities=20% Similarity=0.358 Sum_probs=210.2
Q ss_pred cccccccceEEEEEecC-CCEEEEEEcCCcEEEEEcCC----------CeeeeecccCCCCEEEEEEecCCC-EEEEEEC
Q 002266 56 ILRHHRDGVTALALSPN-STCLASGSIDHSVKLYKFPG----------GEFQTNITRFTLPIRVLAFNKSGS-MLAAAGD 123 (945)
Q Consensus 56 ~l~~h~~~V~~la~spd-g~~Lasgs~Dg~V~iwdl~~----------g~~~~~l~~~~~~V~~l~fspdg~-~Lasgs~ 123 (945)
....|.+.|++++|+|+ +.+|++++.+|.|++|++.. ......+..|...|.+++|+|++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34578999999999997 68999999999999999976 566677888999999999999988 9999999
Q ss_pred CCcEEEEEcCCCeE-------EEEEecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEccCCe---eeeeecccCCCCCC
Q 002266 124 DEGIKLINTIDGSI-------ARVLKGHKGPVTGLAFDP-NSEYLASIDSIGTVIYWELQSGR---ELHNLKRVAPDIGS 192 (945)
Q Consensus 124 Dg~I~iwd~~~~~~-------~~~l~~h~~~V~~lafsp-dg~~Las~s~Dg~I~iwDl~t~~---~i~~~~~~~~~~~~ 192 (945)
||.|++|++..+.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++. .+..+. .
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-------~ 275 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-------A 275 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-------C
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-------c
Confidence 99999999987321 456778999999999999 67899999999999999999863 333332 4
Q ss_pred CCCCceEEEEcCCCC-EEEEEeCCCeEEEEECCC-CcEEEeecCCCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCC-
Q 002266 193 DPSSMNVLSWSPDGE-TLAVPGLKNDVVMYDRDT-AEKLFSLRGDHVQPICFLSWSPNGK-YMATSSLDRQILIWDVGK- 268 (945)
Q Consensus 193 ~~~~i~~l~~spdg~-~La~gs~dg~I~vwD~~t-~~~~~~~~~~h~~~I~~l~fSpdg~-~Lasgs~Dg~I~IWD~~~- 268 (945)
+...+++++|+|++. +|++|+.||.|++||+++ ..++..+.. |...|++++|+|+++ +|++++.||.|+|||+..
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 567899999999887 688999999999999998 456677766 889999999999985 699999999999999976
Q ss_pred -------------Ceeeee-ccCCCCeeEEEEecCCC-EEEEEEcCCeEEEEecC
Q 002266 269 -------------KLDIDR-QKFDDRICCMAWKPIGN-ALAVIDVMGKYGVWESV 308 (945)
Q Consensus 269 -------------~~~i~~-~~~~~~V~~la~spdg~-~Las~s~DG~I~iWd~~ 308 (945)
...+.. ..|...|++++|+|+++ +|++++.||.|++|++.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 133333 46778899999999999 99999999999999975
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=291.90 Aligned_cols=272 Identities=12% Similarity=0.150 Sum_probs=223.0
Q ss_pred ECCCCCEEEEEEcCCCeEEEEcCCCCccccccc-cccccceEEEEEec-CCCEEEEEEcCCcEEEEEcCC---Ceeee-e
Q 002266 25 WDQQAHHLVTASSSETTISIHDPLLPSNLPKIL-RHHRDGVTALALSP-NSTCLASGSIDHSVKLYKFPG---GEFQT-N 98 (945)
Q Consensus 25 fspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l-~~h~~~V~~la~sp-dg~~Lasgs~Dg~V~iwdl~~---g~~~~-~ 98 (945)
|+|++..+++++ .|+.. + .....+ .+|.+.|++++|+| ++.+|++|+.||.|++||+.+ +.... .
T Consensus 35 f~~~~~~~~~~~-------~w~~~-g-~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 105 (437)
T 3gre_A 35 FGPIQEIVRSPN-------MGNLR-G-KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSS 105 (437)
T ss_dssp GCCCCCCCCCCC-------GGGCC-C-CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCS
T ss_pred cCCccccccccc-------ccccc-c-eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccccee
Confidence 678888777653 38743 3 344555 88999999999999 999999999999999999876 43111 1
Q ss_pred c-ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC---CCeEEEEEec------------CCCCEEEEE--EccCCCEE
Q 002266 99 I-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI---DGSIARVLKG------------HKGPVTGLA--FDPNSEYL 160 (945)
Q Consensus 99 l-~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~---~~~~~~~l~~------------h~~~V~~la--fspdg~~L 160 (945)
+ ..|...|.+++|+|++.+|++|+.||.|++||+. ++.....+.. +...+.++. +++++.+|
T Consensus 106 ~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 106 LTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred eeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 1 2588999999999999999999999999999995 4544443332 456677777 56789999
Q ss_pred EEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCe
Q 002266 161 ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240 (945)
Q Consensus 161 as~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I 240 (945)
++++.||.|++||+++++.+..+... .|...|++++|+|++++|++|+.||.|++||+++++.+..+...|...|
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 260 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENS-----PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI 260 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECC-----GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccC-----CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce
Confidence 99999999999999999888877642 1456899999999999999999999999999999999888764477899
Q ss_pred EEEEEcC----CCCEEEEEECCCeEEEEECCCCeeeeecc---------------------------CCCCeeEEEEecC
Q 002266 241 CFLSWSP----NGKYMATSSLDRQILIWDVGKKLDIDRQK---------------------------FDDRICCMAWKPI 289 (945)
Q Consensus 241 ~~l~fSp----dg~~Lasgs~Dg~I~IWD~~~~~~i~~~~---------------------------~~~~V~~la~spd 289 (945)
.+++|+| ++.+|++++.||.|+|||+.++..+.... |...|++++|+ +
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 9996664 68899999999999999999887655422 45568999999 7
Q ss_pred CCEEEEEEcCCeEEEEecCCCC
Q 002266 290 GNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 290 g~~Las~s~DG~I~iWd~~~~~ 311 (945)
+++|++++.||.|++||+..+.
T Consensus 340 ~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 340 DKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp TEEEEEEGGGTEEEEEETTCGG
T ss_pred ceEEEecCCCCeEEEEECCCcc
Confidence 7899999999999999987654
No 98
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=1.3e-28 Score=278.93 Aligned_cols=246 Identities=17% Similarity=0.235 Sum_probs=203.5
Q ss_pred CCCCCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCCCcccccccc---ccccceEEEEEecCCCEEEEEEcCCcEEEEEc
Q 002266 15 GNAASFCSILWDQ-QAHHLVTASSSETTISIHDPLLPSNLPKILR---HHRDGVTALALSPNSTCLASGSIDHSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~---~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl 90 (945)
+|...|.+++|+| ++.+|++++ .|+.|++||+... ....+. .|...|.+++|+|++.+|++|+.||.|++||+
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSS-IRGATTLRDFSGS--VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEE-TTTEEEEEETTSC--EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred CcCCceeEEEeCCCCCCEEEEEe-CCCEEEEEECCCC--ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence 5779999999999 678888876 9999999998753 233333 34578999999999999999999999999999
Q ss_pred CCCeeeeecccCCCCEEEEEEecCCC-EEEEEECCCcEEEEEcCC----CeEEEEEecCCCCEEEEEEcc-CCCEEEEEe
Q 002266 91 PGGEFQTNITRFTLPIRVLAFNKSGS-MLAAAGDDEGIKLINTID----GSIARVLKGHKGPVTGLAFDP-NSEYLASID 164 (945)
Q Consensus 91 ~~g~~~~~l~~~~~~V~~l~fspdg~-~Lasgs~Dg~I~iwd~~~----~~~~~~l~~h~~~V~~lafsp-dg~~Las~s 164 (945)
+++....+..|...|.+++|+|++. +|++++.|+.|++||+++ +..+..+ +|...|.+++|+| ++.+|++++
T Consensus 193 -~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 193 -DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp -TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred -CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 5777888888999999999999999 999999999999999987 5566666 6999999999999 999999999
Q ss_pred CCCcEEEEEccCCeeeeeecccCCCCCCCCCC----------ceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC
Q 002266 165 SIGTVIYWELQSGRELHNLKRVAPDIGSDPSS----------MNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234 (945)
Q Consensus 165 ~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~----------i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~ 234 (945)
.||.|++||++++.....+..+......+... +..++|+|+|++ +++.|+.|++||+.+++.+..+.+
T Consensus 271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence 99999999999987766665433222222233 333555555555 566899999999999999888875
Q ss_pred C-CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 235 D-HVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 235 ~-h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
. |...+..++|+|+|++|++++ ||.|+|||+.+
T Consensus 349 ~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 3 456788889999999999997 99999999875
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.5e-28 Score=262.76 Aligned_cols=251 Identities=18% Similarity=0.216 Sum_probs=218.8
Q ss_pred cCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCC
Q 002266 46 DPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE 125 (945)
Q Consensus 46 d~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg 125 (945)
|...+......+.+|.+.|++++| +++.+|++|+.||.|++|++.++.....+..|...|.+++|+|++.+|++++.|+
T Consensus 3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 333444566778899999999999 9999999999999999999999998888889999999999999999999999999
Q ss_pred cEEEEEcCCC---eEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEE
Q 002266 126 GIKLINTIDG---SIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSW 202 (945)
Q Consensus 126 ~I~iwd~~~~---~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~ 202 (945)
.|++|++... .....+.+|...|.+++| ++.+|++++.||.|++|| .+.....+. .+...+.+++|
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~-------~~~~~v~~~~~ 150 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ-------AHNASVWDAKV 150 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE-------CCSSCEEEEEE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc-------cCCCceeEEEE
Confidence 9999998764 567778899999999999 577999999999999999 555555554 34577899999
Q ss_pred cC-CCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cCCCC
Q 002266 203 SP-DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KFDDR 280 (945)
Q Consensus 203 sp-dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~ 280 (945)
+| ++.++++++.++.|++|| ..+....+...|...|.+++|+|++. +++++.||.|++||+.+++.+... .|...
T Consensus 151 ~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 227 (313)
T 3odt_A 151 VSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF 227 (313)
T ss_dssp EETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce
Confidence 88 999999999999999999 45566666666889999999999998 999999999999999998887764 58889
Q ss_pred eeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 281 ICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 281 V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
|++++|+|++ .|++++.||.|++||+..+..
T Consensus 228 i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 228 VYCIKLLPNG-DIVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp EEEEEECTTS-CEEEEETTSEEEEECTTTCCE
T ss_pred EEEEEEecCC-CEEEEecCCEEEEEECCCCce
Confidence 9999999999 699999999999999877654
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=5.9e-28 Score=278.13 Aligned_cols=247 Identities=21% Similarity=0.325 Sum_probs=214.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g- 93 (945)
+|...|++|+|+|+|++|++++ .||.|+|||+.++ .....+.+|...|.+++|+ +.+|++|+.|+.+++|+....
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs-~Dg~v~iWd~~~~-~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGT-SSAEVQLWDVQQQ-KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTT-EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS
T ss_pred CCCCcEEEEEECCCCCEEEEEE-CCCeEEEEEcCCC-cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc
Confidence 4668899999999999999987 9999999999877 5567788999999998875 579999999999999998764
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCe----EEEEEecCCCCEEEEEEccCCC-EEEEE--eCC
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS----IARVLKGHKGPVTGLAFDPNSE-YLASI--DSI 166 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~----~~~~l~~h~~~V~~lafspdg~-~Las~--s~D 166 (945)
..+..+..|...+..+.|+|++.++++++.|+.|++|+..++. .+.....|...|.+++|+|.+. +++++ +.|
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 4456778899999999999999999999999999999998764 3566778999999999999654 55543 579
Q ss_pred CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEeecCCCCCCeEEEE
Q 002266 167 GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG--LKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244 (945)
Q Consensus 167 g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs--~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~ 244 (945)
++|++||+.++.....+.. ...+.++.|+|+++.+++++ .|+.|+|||+.+++++..+.+ |...|++++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~--------~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g-H~~~V~~l~ 371 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDA--------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLT 371 (420)
T ss_dssp CEEEEEETTTTEEEEEEEC--------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEE
T ss_pred CEEEEEeCCccccceeecc--------ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC-CCCCEEEEE
Confidence 9999999999988877653 24578899999999988765 689999999999999999987 999999999
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCeeeee
Q 002266 245 WSPNGKYMATSSLDRQILIWDVGKKLDIDR 274 (945)
Q Consensus 245 fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~ 274 (945)
|+|+|++|++|+.|++|+|||+........
T Consensus 372 ~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 372 MSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp ECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred EcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 999999999999999999999977554443
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1e-27 Score=275.76 Aligned_cols=279 Identities=11% Similarity=0.112 Sum_probs=235.7
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccc----cccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPK----ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~----~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g 93 (945)
..+.+++|+|+ ..++++++.++.|++||+.++..... .+.+|...|.+++|++++.++++++.|+.|++||+.++
T Consensus 123 ~~~~~~~~s~~-~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 123 FQPKSVRFIDN-TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SCBCCCEESSS-SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCceEEEEeCC-CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 45668999994 45555555889999999887643221 45578889999999999999999999999999999999
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEE-CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe--------
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-------- 164 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-------- 164 (945)
+....+..+...+.+++|+|+++++++++ .++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCcccc
Confidence 88888888889999999999999886555 7899999999999888777654 5699999999999999887
Q ss_pred CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE-EEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEE
Q 002266 165 SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL-AVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFL 243 (945)
Q Consensus 165 ~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L-a~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l 243 (945)
.||.|++||+.+++.+..+.. ...+..++|+|+++.+ ++++.++.|++||+.+++.+..+. +...+.++
T Consensus 281 ~dg~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~ 350 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTIGP--------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP--VFDKPNTI 350 (433)
T ss_dssp CCEEEEEEETTTTEEEEEEEE--------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEE
T ss_pred CCCeEEEEECCCCcEEeeccC--------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--CCCCCCeE
Confidence 488999999999877665522 2356789999999765 555789999999999998887775 56789999
Q ss_pred EEcCCCCEEEEEEC---------------CCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEc-CCeEEEEec
Q 002266 244 SWSPNGKYMATSSL---------------DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDV-MGKYGVWES 307 (945)
Q Consensus 244 ~fSpdg~~Lasgs~---------------Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~-DG~I~iWd~ 307 (945)
+|+|+|++|++++. ||.|++||+.+++.+........+.+++|+|+|++|++++. |+.|++|++
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 99999999988876 57999999999998888777778999999999999998875 999999987
Q ss_pred C
Q 002266 308 V 308 (945)
Q Consensus 308 ~ 308 (945)
.
T Consensus 431 ~ 431 (433)
T 3bws_A 431 D 431 (433)
T ss_dssp T
T ss_pred c
Confidence 4
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.2e-27 Score=271.23 Aligned_cols=286 Identities=16% Similarity=0.226 Sum_probs=204.8
Q ss_pred CCCCCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecC---CCEEEEEEcCCcEEEEEc
Q 002266 15 GNAASFCSILWDQ-QAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPN---STCLASGSIDHSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spd---g~~Lasgs~Dg~V~iwdl 90 (945)
+|...|.+++|+| ++.+|++++ .|+.|++||+.+.. ....+ .+...+.+++|++. +.+|++++.+|.|++||+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSS-FDKTLKVWDTNTLQ-TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEE-TTSEEEEEETTTTE-EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred cCCCcEEEEEEccCCCcEEEEEe-CCCeEEEeeCCCCc-cceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 5779999999999 677888876 89999999988763 23333 36788999999984 459999999999999999
Q ss_pred CCCeeeeecccCCCCEEEEEEecCCC-EEEEEECCCcEEEEEcCCCe-EEEEE---------------ecCCCCEEEEEE
Q 002266 91 PGGEFQTNITRFTLPIRVLAFNKSGS-MLAAAGDDEGIKLINTIDGS-IARVL---------------KGHKGPVTGLAF 153 (945)
Q Consensus 91 ~~g~~~~~l~~~~~~V~~l~fspdg~-~Lasgs~Dg~I~iwd~~~~~-~~~~l---------------~~h~~~V~~laf 153 (945)
.+++....+..|...|.+++|+|++. +|++|+.||.|++||++++. ....+ ..|...|.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 99998888999999999999999998 58999999999999998765 33444 568899999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec
Q 002266 154 DPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233 (945)
Q Consensus 154 spdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~ 233 (945)
+|++++|++++.||.|++||+.+++............ ....+........+..+++++.++.|++||+.+++.+..+.
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNN--SKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCC--CSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceecccccccc--ccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 9999999999999999999999887654443221111 11112222223345566666789999999999999999998
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecC-CCEEEEEEcCCeEEEEecC
Q 002266 234 GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPI-GNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 234 ~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spd-g~~Las~s~DG~I~iWd~~ 308 (945)
+ |...|++++|+|++++|++++.||.|+|||+.+++.+......... ..+.+. ...+.+.+.++.+++|+..
T Consensus 332 ~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 332 G-HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK--SQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp C-CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------------------------
T ss_pred c-CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec--cccccccceeecccCccCceeecCCc
Confidence 7 9999999999999999999999999999999998877654332222 234442 3355667888999999753
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-28 Score=304.73 Aligned_cols=251 Identities=22% Similarity=0.368 Sum_probs=216.0
Q ss_pred ccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC--CCeeeeecccCCCCEEEEEEecC--CCEEEEEECCCcEEEE
Q 002266 55 KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP--GGEFQTNITRFTLPIRVLAFNKS--GSMLAAAGDDEGIKLI 130 (945)
Q Consensus 55 ~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~--~g~~~~~l~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~iw 130 (945)
.++.+|.+.|++++|+|++++|++|+.||.|++|++. ++.....+.+|..+|++++|+++ +.+|++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4678999999999999999999999999999999997 45667788899999999999988 9999999999999999
Q ss_pred EcCCCe--EEEEEecCCCCEEEEEEccC--CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC--
Q 002266 131 NTIDGS--IARVLKGHKGPVTGLAFDPN--SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP-- 204 (945)
Q Consensus 131 d~~~~~--~~~~l~~h~~~V~~lafspd--g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp-- 204 (945)
|+.++. ....+.+|...|.+++|+|+ +.+|++++.||.|++||++++....... ...+...+.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~-----~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII-----IDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE-----EECCSSCEEEEEECCCC
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE-----eecCCCceEEEEecCcc
Confidence 999987 67778889999999999999 9999999999999999998874332221 124567899999999
Q ss_pred -----------CCCEEEEEeCCCeEEEEECCCC----cEEEeecCCCCCCeEEEEEcCC---CCEEEEEECCCeEEEEEC
Q 002266 205 -----------DGETLAVPGLKNDVVMYDRDTA----EKLFSLRGDHVQPICFLSWSPN---GKYMATSSLDRQILIWDV 266 (945)
Q Consensus 205 -----------dg~~La~gs~dg~I~vwD~~t~----~~~~~~~~~h~~~I~~l~fSpd---g~~Lasgs~Dg~I~IWD~ 266 (945)
++.+|++|+.||.|++||++++ .....+.+ |...|++++|+|+ |.+|++++.||.|+|||+
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC-CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 5899999999999999999877 34455655 8999999999999 999999999999999999
Q ss_pred CCCe------eeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 267 GKKL------DIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 267 ~~~~------~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
.++. ......|...|++++|+|+|++|++++.||.|++|++..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 8863 22234577889999999999999999999999999987544
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.3e-27 Score=269.37 Aligned_cols=283 Identities=11% Similarity=0.137 Sum_probs=214.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEE-EEEEcCCcEEEEEcCCC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCL-ASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~L-asgs~Dg~V~iwdl~~g 93 (945)
+|...|++++|+|||++|++++ .+ .++||+...... ....+...+..+++.++++.+ ++++.|+.|++||+.++
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~-~~-~~~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILST-LK-SFEIYNVHPVAH---IMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEEC-SS-EEEEEEETTEEE---EEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred cCCCceEEEEECCCCCEEEEEc-CC-EEEEEecCCcce---eeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence 5679999999999999998875 44 588999765422 122233358888999988877 45677899999999999
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC-eEEEEEecCCCCEEEEEEccCCCEEEE--EeCCCcEE
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG-SIARVLKGHKGPVTGLAFDPNSEYLAS--IDSIGTVI 170 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~-~~~~~l~~h~~~V~~lafspdg~~Las--~s~Dg~I~ 170 (945)
+.+..+. +..+|.++.|+++. ++++ .++.|++||+.++ +.+..+.. +...+++++ .++++ ++.||.|+
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIH 162 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEE
T ss_pred cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEE
Confidence 9888776 67799999998764 4444 4788999999987 65555544 444566776 56666 57899999
Q ss_pred EEEccCCeeeeeecc--------c-CCCCCCCCCCceEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEeec-CCCCCC
Q 002266 171 YWELQSGRELHNLKR--------V-APDIGSDPSSMNVLSWSPDGETLAVPGLKND-VVMYDRDTAEKLFSLR-GDHVQP 239 (945)
Q Consensus 171 iwDl~t~~~i~~~~~--------~-~~~~~~~~~~i~~l~~spdg~~La~gs~dg~-I~vwD~~t~~~~~~~~-~~h~~~ 239 (945)
+||+.++........ . ......|...|.+++|+|+|++|++++.|+. |++||+.+++.+..+. +.|...
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~ 242 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD 242 (355)
T ss_dssp EEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC
T ss_pred EEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc
Confidence 999987652110000 0 1122357788999999999999999999998 9999999999999987 348899
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec------------------------cCCCCeeEEEEecCCCEEEE
Q 002266 240 ICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ------------------------KFDDRICCMAWKPIGNALAV 295 (945)
Q Consensus 240 I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~------------------------~~~~~V~~la~spdg~~Las 295 (945)
|.+++|+|+|++|++++.|+.|+|||+......... ........++|+++++.|++
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~ 322 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVV 322 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEE
Confidence 999999999999999999999999999764321110 01123477999999999999
Q ss_pred EEcCCeEEEEecCCCC
Q 002266 296 IDVMGKYGVWESVVPS 311 (945)
Q Consensus 296 ~s~DG~I~iWd~~~~~ 311 (945)
++.||.+++|++....
T Consensus 323 ~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 323 WPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTTTEEEEEEEEEET
T ss_pred EeCCCeEEEEEEEcCC
Confidence 9999999999986443
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=9.1e-28 Score=266.20 Aligned_cols=245 Identities=13% Similarity=0.083 Sum_probs=208.2
Q ss_pred cccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe---eeeecccCCCCEEEEEEecCCC-EEEEEECCCcEEEEE
Q 002266 56 ILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE---FQTNITRFTLPIRVLAFNKSGS-MLAAAGDDEGIKLIN 131 (945)
Q Consensus 56 ~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~---~~~~l~~~~~~V~~l~fspdg~-~Lasgs~Dg~I~iwd 131 (945)
...+|.+.|++++|+|++.+|++++.||.|++|++.++. ....+..|...|.+++|+|+++ +|++|+.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 345799999999999999999999999999999998776 2344557899999999999999 999999999999999
Q ss_pred c-CCCeEEEEEec--CCCCEEEEEEccCCCEEEEEeCCCcEEEEEccC---------CeeeeeecccCCCCCCCCCCceE
Q 002266 132 T-IDGSIARVLKG--HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQS---------GRELHNLKRVAPDIGSDPSSMNV 199 (945)
Q Consensus 132 ~-~~~~~~~~l~~--h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t---------~~~i~~~~~~~~~~~~~~~~i~~ 199 (945)
+ .++.. ..+.+ |...|.+++|+| +.+|++++.||.|++||+++ ++.+..+ .+...+.+
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~~v~~ 155 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--------KVKNKIFT 155 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--------SSCCCEEE
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE--------eeCCceEE
Confidence 9 77754 67788 999999999999 99999999999999999986 4433322 25578999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCC-CcE-EEeecCCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCC------e
Q 002266 200 LSWSPDGETLAVPGLKNDVVMYDRDT-AEK-LFSLRGDHVQPICFLSWSP-NGKYMATSSLDRQILIWDVGKK------L 270 (945)
Q Consensus 200 l~~spdg~~La~gs~dg~I~vwD~~t-~~~-~~~~~~~h~~~I~~l~fSp-dg~~Lasgs~Dg~I~IWD~~~~------~ 270 (945)
++|+|++ +++++.++.|++||+++ +.. .......|...|.+++|+| ++++|++++.||.|+||++... .
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 9999987 89999999999999998 543 2223334788999999999 9999999999999999999776 4
Q ss_pred eeee-ccCC---------CCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 271 DIDR-QKFD---------DRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 271 ~i~~-~~~~---------~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
.... ..|. ..|.+++|+|++++|++++.||.|++||+..+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 4333 2333 3899999999999999999999999999876553
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1e-27 Score=271.37 Aligned_cols=248 Identities=13% Similarity=0.110 Sum_probs=197.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEE----------cCCCeEEEEcCCCCcccccc--------ccccccceEEEEEecCCCEE
Q 002266 15 GNAASFCSILWDQQAHHLVTAS----------SSETTISIHDPLLPSNLPKI--------LRHHRDGVTALALSPNSTCL 76 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g----------~~dg~V~IWd~~~~~~~~~~--------l~~h~~~V~~la~spdg~~L 76 (945)
+|...|.++++ ++..+++++ +.|+.+++|++......... ...+...+.+++|+|||++|
T Consensus 71 ~~~~~v~s~~~--~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~l 148 (365)
T 4h5i_A 71 DNDDSPTAIDA--SKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVA 148 (365)
T ss_dssp TTSCCCCEEEE--ETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCE
T ss_pred CCCCceEEEEe--CCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEE
Confidence 45577888766 566777663 24778999987554322111 12344568999999999998
Q ss_pred EEEE--cCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEE--EecCCCCEEEEE
Q 002266 77 ASGS--IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV--LKGHKGPVTGLA 152 (945)
Q Consensus 77 asgs--~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~--l~~h~~~V~~la 152 (945)
++++ .|++|+|||+.+++....+. |...|.+++|+|+|++|++++.+ .+.+|+..++..... ...|...|.+++
T Consensus 149 a~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 149 AIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp EEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred EEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 7655 68999999999999887775 77889999999999999998855 577777777765543 456888999999
Q ss_pred EccCCCEEEEEeCCC----cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Q 002266 153 FDPNSEYLASIDSIG----TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 153 fspdg~~Las~s~Dg----~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
|+|++.++++++.|+ .+++|++.......... .....+...|++++|+|+|++||+|+.|+.|+|||+.++++
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS---KQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM 303 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE---EEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceee---eeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE
Confidence 999999999998887 68889988765422111 11224567899999999999999999999999999999999
Q ss_pred EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q 002266 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 229 ~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~ 269 (945)
+..+...|...|++|+|||||++||+|+.|++|+|||+...
T Consensus 304 ~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 304 SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 98876559999999999999999999999999999999643
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=1.3e-27 Score=273.16 Aligned_cols=247 Identities=14% Similarity=0.218 Sum_probs=211.0
Q ss_pred CCCCCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCCCc------cccccccccccceEEEEEecCC-CEEEEEEcCCcEE
Q 002266 15 GNAASFCSILWDQ-QAHHLVTASSSETTISIHDPLLPS------NLPKILRHHRDGVTALALSPNS-TCLASGSIDHSVK 86 (945)
Q Consensus 15 gh~~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~~~------~~~~~l~~h~~~V~~la~spdg-~~Lasgs~Dg~V~ 86 (945)
+|.+.|++++|+| ++.+|++++ .||.|+||++.+.. .....+.+|...|.+++|+|++ .+|++++.||.|+
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s-~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGS-EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEE-TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred cCCCCEEEEEeCCCCCCEEEEEe-CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 6779999999999 899999887 99999999987763 3456678899999999999998 6999999999999
Q ss_pred EEEcCCCeeeeec--ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE-ecCCCC-EEEEEEccCCCEEEE
Q 002266 87 LYKFPGGEFQTNI--TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGP-VTGLAFDPNSEYLAS 162 (945)
Q Consensus 87 iwdl~~g~~~~~l--~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l-~~h~~~-V~~lafspdg~~Las 162 (945)
+||+.+++....+ ..|...|.+++|+|++.+|++++.|+.|++||++++..+..+ ..|.+. +.+++|+|++.+|++
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 9999999988888 789999999999999999999999999999999999998888 688776 899999999999999
Q ss_pred E---eCCCcEEEEEccCCee-eeeecccCCCCCCCCCCceEEEEcCCCCEEEE-EeCCCeEEEEECCCCcE-EEeecC-C
Q 002266 163 I---DSIGTVIYWELQSGRE-LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV-PGLKNDVVMYDRDTAEK-LFSLRG-D 235 (945)
Q Consensus 163 ~---s~Dg~I~iwDl~t~~~-i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~-gs~dg~I~vwD~~t~~~-~~~~~~-~ 235 (945)
+ +.|+.|++||++++.. +..... .+...+.+++|+|++++|++ ++.|+.|++||+.+++. +..+.. .
T Consensus 238 g~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~ 311 (402)
T 2aq5_A 238 GFSRMSERQVALWDTKHLEEPLSLQEL------DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS 311 (402)
T ss_dssp EECTTCCEEEEEEETTBCSSCSEEEEC------CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred eccCCCCceEEEEcCccccCCceEEec------cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence 9 7899999999988754 222211 23456899999999999975 44799999999998873 333322 1
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe
Q 002266 236 HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL 270 (945)
Q Consensus 236 h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~ 270 (945)
|...|.+++|+|++.++++ .++.+++|++.++.
T Consensus 312 ~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 312 SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred cCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 5689999999999998875 46799999987754
No 108
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=2.6e-28 Score=282.55 Aligned_cols=252 Identities=17% Similarity=0.201 Sum_probs=200.7
Q ss_pred CCCCCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCCCcccccccc--ccccceEEEEEecCCCEEEEEEcCCcEEEEEcC
Q 002266 15 GNAASFCSILWDQ-QAHHLVTASSSETTISIHDPLLPSNLPKILR--HHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 15 gh~~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~--~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~ 91 (945)
+|.+.|++|+|+| ++.+|++++ .||+|+|||+.... ...... .+...+.+++|+|++.+|++|+.||.|++||+.
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s-~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASS-MEGTTRLQDFKGNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEEC-SSSCEEEEETTSCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEe-CCCEEEEeeccCCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC
Confidence 6889999999998 678888886 99999999987542 222222 234567899999999999999999999999986
Q ss_pred CCeeeeecccCCCCEEEEEEecCCC-EEEEEECCCcEEEEEcCCCeEEE---EEecCCCCEEEEEEccCCCEEEEEeCCC
Q 002266 92 GGEFQTNITRFTLPIRVLAFNKSGS-MLAAAGDDEGIKLINTIDGSIAR---VLKGHKGPVTGLAFDPNSEYLASIDSIG 167 (945)
Q Consensus 92 ~g~~~~~l~~~~~~V~~l~fspdg~-~Lasgs~Dg~I~iwd~~~~~~~~---~l~~h~~~V~~lafspdg~~Las~s~Dg 167 (945)
++.+..+..|...|.+++|+|++. +|++|+.|+.|++||+++..... ...+|...|++++|+|+|.+|++++.||
T Consensus 240 -~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~ 318 (435)
T 4e54_B 240 -GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS 318 (435)
T ss_dssp -SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS
T ss_pred -cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC
Confidence 455677888999999999999876 78899999999999998765432 3357999999999999999999999999
Q ss_pred cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC------------CCeEEEEECCCCcEEEeecCC
Q 002266 168 TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL------------KNDVVMYDRDTAEKLFSLRGD 235 (945)
Q Consensus 168 ~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~------------dg~I~vwD~~t~~~~~~~~~~ 235 (945)
.|+|||+.++.....+..+...... ...+..+.|+|++.+++++.. ++.|++||..+++.+..+...
T Consensus 319 ~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~ 397 (435)
T 4e54_B 319 EIRVYSASQWDCPLGLIPHPHRHFQ-HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP 397 (435)
T ss_dssp CEEEEESSSSSSEEEECCCCCCCCS-SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS
T ss_pred EEEEEECCCCccceEEecccccccc-cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC
Confidence 9999999998776665543322211 122334677777777776542 357999999999999888777
Q ss_pred CCCCeEEE-EEcCCCCEEEEEECCCeEEEEECCCCee
Q 002266 236 HVQPICFL-SWSPNGKYMATSSLDRQILIWDVGKKLD 271 (945)
Q Consensus 236 h~~~I~~l-~fSpdg~~Lasgs~Dg~I~IWD~~~~~~ 271 (945)
|...|.++ +|+|+|++|++|+ |+.|+||++++++.
T Consensus 398 ~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 398 ESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 88889887 6999999999886 88999999988764
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.2e-27 Score=276.84 Aligned_cols=246 Identities=24% Similarity=0.385 Sum_probs=208.8
Q ss_pred CCCCCEEEEEECCC-CCEEEEEEcCCCeEEEEcCCCC---------ccccccccccccceEEEEEecCCC-EEEEEEcCC
Q 002266 15 GNAASFCSILWDQQ-AHHLVTASSSETTISIHDPLLP---------SNLPKILRHHRDGVTALALSPNST-CLASGSIDH 83 (945)
Q Consensus 15 gh~~~V~svafspd-g~~L~t~g~~dg~V~IWd~~~~---------~~~~~~l~~h~~~V~~la~spdg~-~Lasgs~Dg 83 (945)
+|.+.|++++|+|+ +.+|+++ +.+|.|+||++... ......+.+|...|++++|+|++. +|++|+.||
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~-~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATK-TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEE-CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred cCCCcEEEEEECCCCCcEEEEE-CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 67789999999998 4556655 48999999998652 244566778999999999999988 999999999
Q ss_pred cEEEEEcCCCee-------eeecccCCCCEEEEEEec-CCCEEEEEECCCcEEEEEcCCC---eEEEEEecCCCCEEEEE
Q 002266 84 SVKLYKFPGGEF-------QTNITRFTLPIRVLAFNK-SGSMLAAAGDDEGIKLINTIDG---SIARVLKGHKGPVTGLA 152 (945)
Q Consensus 84 ~V~iwdl~~g~~-------~~~l~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~iwd~~~~---~~~~~l~~h~~~V~~la 152 (945)
.|++|++..+.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ ..+..+..|...|++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 999999987422 345567889999999999 7889999999999999999987 56777889999999999
Q ss_pred EccCCC-EEEEEeCCCcEEEEEccCC-eeeeeecccCCCCCCCCCCceEEEEcCCCC-EEEEEeCCCeEEEEECCC----
Q 002266 153 FDPNSE-YLASIDSIGTVIYWELQSG-RELHNLKRVAPDIGSDPSSMNVLSWSPDGE-TLAVPGLKNDVVMYDRDT---- 225 (945)
Q Consensus 153 fspdg~-~Las~s~Dg~I~iwDl~t~-~~i~~~~~~~~~~~~~~~~i~~l~~spdg~-~La~gs~dg~I~vwD~~t---- 225 (945)
|+|++. +|++++.||.|++||+++. ..+..+. .|...+.+++|+|++. +|++++.|+.|++||+..
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-------~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-------CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-------cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 999887 6889999999999999874 4455544 3567899999999885 689999999999999986
Q ss_pred ----------CcEEEeecCCCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCC
Q 002266 226 ----------AEKLFSLRGDHVQPICFLSWSPNGK-YMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 226 ----------~~~~~~~~~~h~~~I~~l~fSpdg~-~Lasgs~Dg~I~IWD~~~~ 269 (945)
...+..+.+ |...|.+++|+|++. +|++++.||.|+||++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 245566655 889999999999999 8999999999999998764
No 110
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.6e-26 Score=260.24 Aligned_cols=269 Identities=14% Similarity=0.154 Sum_probs=224.0
Q ss_pred CEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEE-EEEEcCCcEEEEEcCCCeeeeecccCCCCEEE
Q 002266 30 HHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCL-ASGSIDHSVKLYKFPGGEFQTNITRFTLPIRV 108 (945)
Q Consensus 30 ~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~L-asgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~ 108 (945)
++++++++.++.|++||+.++ .....+..| ..+.+++|+|++++| ++++.++.|++||+.+++....+..+. .+.+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~-~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~ 78 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSN-KVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQG 78 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTT-EEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred CEEEEEcCCCCEEEEEECCCC-eEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccc
Confidence 355666669999999999876 444555555 458999999999977 566689999999999999887776544 8999
Q ss_pred EEEecCCCEEEEEE-CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEEccCCeeeeeeccc
Q 002266 109 LAFNKSGSMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYL-ASIDSIGTVIYWELQSGRELHNLKRV 186 (945)
Q Consensus 109 l~fspdg~~Lasgs-~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~L-as~s~Dg~I~iwDl~t~~~i~~~~~~ 186 (945)
++|+|++++|++++ .++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++.++.|++||+.+++.+..+..
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~- 156 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV- 156 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec-
Confidence 99999999886655 5699999999999988877754 578999999999977 6777899999999999988776643
Q ss_pred CCCCCCCCCCceEEEEcCCCCEE-EEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEE---CCCeEE
Q 002266 187 APDIGSDPSSMNVLSWSPDGETL-AVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSS---LDRQIL 262 (945)
Q Consensus 187 ~~~~~~~~~~i~~l~~spdg~~L-a~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs---~Dg~I~ 262 (945)
...+..++|+|+|++| ++++.++.|++||+.+++.+..+. +...+.+++|+|+|++|++++ .++.|+
T Consensus 157 -------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 157 -------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp -------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred -------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCcCCCcEE
Confidence 1346889999999988 566778999999999998877775 456789999999999999888 689999
Q ss_pred EEECCCCeeeeeccCCCCeeEEEEecCCCEE-EEEEcCCeEEEEecCCCCC
Q 002266 263 IWDVGKKLDIDRQKFDDRICCMAWKPIGNAL-AVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 263 IWD~~~~~~i~~~~~~~~V~~la~spdg~~L-as~s~DG~I~iWd~~~~~~ 312 (945)
+||+.+++.+........+.+++|+|++++| ++++.|+.|++||+..+..
T Consensus 228 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 228 MIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 9999999888877666778999999999977 5668899999999876543
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.7e-28 Score=300.49 Aligned_cols=250 Identities=19% Similarity=0.283 Sum_probs=213.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-cccccccccccceEEEEEecC--CCEEEEEEcCCcEEEEEcC
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPN--STCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-~~~~~l~~h~~~V~~la~spd--g~~Lasgs~Dg~V~iwdl~ 91 (945)
+|.+.|++++|+|+|++|++++ .||.|+|||+.... .....+.+|.+.|++++|+++ +++|++|+.||.|++||+.
T Consensus 7 gH~~~V~~l~~s~dg~~latg~-~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEE-TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEE-CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 5669999999999999999987 89999999986332 445677889999999999987 9999999999999999999
Q ss_pred CCe--eeeecccCCCCEEEEEEecC--CCEEEEEECCCcEEEEEcCCC--eEEEEEecCCCCEEEEEEcc----------
Q 002266 92 GGE--FQTNITRFTLPIRVLAFNKS--GSMLAAAGDDEGIKLINTIDG--SIARVLKGHKGPVTGLAFDP---------- 155 (945)
Q Consensus 92 ~g~--~~~~l~~~~~~V~~l~fspd--g~~Lasgs~Dg~I~iwd~~~~--~~~~~l~~h~~~V~~lafsp---------- 155 (945)
+++ ....+..|...|.+++|+|+ +.++++|+.||.|++||+.++ .....+.+|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 886 66777889999999999999 999999999999999999876 34556778999999999999
Q ss_pred ---CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC---CCEEEEEeCCCeEEEEECCCCc--
Q 002266 156 ---NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD---GETLAVPGLKNDVVMYDRDTAE-- 227 (945)
Q Consensus 156 ---dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd---g~~La~gs~dg~I~vwD~~t~~-- 227 (945)
++.+|++++.||.|++||++++........ ....|...|.+++|+|+ +.+|++++.||.|++||+.++.
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLES---TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEE---EECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeee---eecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 589999999999999999998743222111 12256688999999999 9999999999999999998864
Q ss_pred ---EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q 002266 228 ---KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 228 ---~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~ 269 (945)
...... .|...|++++|+|+|++|++++.||.|+||++..+
T Consensus 243 ~~~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 243 WKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CBCCBSSSS-CCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred ceeEEeccC-CCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 222222 37889999999999999999999999999999864
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.1e-28 Score=269.04 Aligned_cols=265 Identities=12% Similarity=0.031 Sum_probs=208.6
Q ss_pred ECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC---------CCee
Q 002266 25 WDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP---------GGEF 95 (945)
Q Consensus 25 fspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~---------~g~~ 95 (945)
+.+++..|++++ .||.|++||+.++.. ...+. ...|.++.|+|+ +++++.|++|++|+.. +++.
T Consensus 44 ~~~d~~~l~sg~-~Dg~v~iwd~~~~~~-~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 44 MYYDKWVCMCRC-EDGALHFTQLKDSKT-ITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSEEEEEEEEEE-ETTEEEEEEESSSSC-EEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hcCCCCEEEEEC-CCCcEEEEECCCCcE-EEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 445778888886 999999999887643 33333 467888889887 9999999999999765 3443
Q ss_pred eeecc-cCCCCEEEEEEec--CCCEEEEEECCCcEEEEEcCCCeEEEEEe-cCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 002266 96 QTNIT-RFTLPIRVLAFNK--SGSMLAAAGDDEGIKLINTIDGSIARVLK-GHKGPVTGLAFDPNSEYLASIDSIGTVIY 171 (945)
Q Consensus 96 ~~~l~-~~~~~V~~l~fsp--dg~~Lasgs~Dg~I~iwd~~~~~~~~~l~-~h~~~V~~lafspdg~~Las~s~Dg~I~i 171 (945)
+..+. .|..+|.+++|+| ++.+|++++.|+.|++||++++....... .|...|.+++|+|++.+|++|+.||.|++
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 33332 5668899999999 99999999999999999999998876664 45568999999999999999999999999
Q ss_pred EEccCCeee-eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC--CCCCCe--EEEEEc
Q 002266 172 WELQSGREL-HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG--DHVQPI--CFLSWS 246 (945)
Q Consensus 172 wDl~t~~~i-~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~--~h~~~I--~~l~fS 246 (945)
||+++++.+ ..+.. .|...|++++|+|+|.+|++++ ++.|++||+++++.+..+.. .|...+ .+++|+
T Consensus 197 wd~~~~~~~~~~~~~------~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 197 YNLSSPDQASSRFPV------DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp EESSCTTSCCEECCC------CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC
T ss_pred EECCCCCCCccEEec------cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEEC
Confidence 999998765 44432 2568899999999999999999 55999999998876554432 122333 469999
Q ss_pred CCCCEEEEEEC-CCeEEEEECCCCeeeeeccCCCCeeEEEEec---CCCEEEEEEcCCeEEEEe
Q 002266 247 PNGKYMATSSL-DRQILIWDVGKKLDIDRQKFDDRICCMAWKP---IGNALAVIDVMGKYGVWE 306 (945)
Q Consensus 247 pdg~~Lasgs~-Dg~I~IWD~~~~~~i~~~~~~~~V~~la~sp---dg~~Las~s~DG~I~iWd 306 (945)
|+|++|++++. |+.|+||++.+....... .++..++|.+ +...|++++.||.+.++-
T Consensus 270 ~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 270 DSGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred CCCCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEecCCceEEEE
Confidence 99999999998 999999999765432222 5677888998 888999999999998874
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.7e-27 Score=272.25 Aligned_cols=287 Identities=13% Similarity=0.091 Sum_probs=202.4
Q ss_pred CCEEEEEE---CCCCCEEEEEEcCCCeEEEEcCCCCccc--------cccccccccceEEEEEe----------------
Q 002266 18 ASFCSILW---DQQAHHLVTASSSETTISIHDPLLPSNL--------PKILRHHRDGVTALALS---------------- 70 (945)
Q Consensus 18 ~~V~svaf---spdg~~L~t~g~~dg~V~IWd~~~~~~~--------~~~l~~h~~~V~~la~s---------------- 70 (945)
....++.| +|++..|+++| .++.|.+|+....... ......+...+..+.|+
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIG-HDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNV 94 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEE-ESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC--------
T ss_pred CCCeEEEEeCCCCCCCCEEEEE-CCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcce
Confidence 44667777 45555566665 6888999974322100 00011233444444443
Q ss_pred ----cCCCEEEEEEcCCcEEEEEcCCCeee-----eecccCCCCEEEEEEec--------CCCEEEEEECCCcEEEEEcC
Q 002266 71 ----PNSTCLASGSIDHSVKLYKFPGGEFQ-----TNITRFTLPIRVLAFNK--------SGSMLAAAGDDEGIKLINTI 133 (945)
Q Consensus 71 ----pdg~~Lasgs~Dg~V~iwdl~~g~~~-----~~l~~~~~~V~~l~fsp--------dg~~Lasgs~Dg~I~iwd~~ 133 (945)
+++.+|++++.|++|+|||+.+++.. ..+.+|...|.+++|+| ++++||+|+.|++|+|||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 35568999999999999999887643 34678999999999998 78999999999999999999
Q ss_pred CCeEEEEEecCCCCEEEEEEccCCC-EEEEEeCCCcEEEEEccCCeeeeeecccC------------------CCCCCCC
Q 002266 134 DGSIARVLKGHKGPVTGLAFDPNSE-YLASIDSIGTVIYWELQSGRELHNLKRVA------------------PDIGSDP 194 (945)
Q Consensus 134 ~~~~~~~l~~h~~~V~~lafspdg~-~Las~s~Dg~I~iwDl~t~~~i~~~~~~~------------------~~~~~~~ 194 (945)
++.....+..|...|.+++|+|++. +|++++.||+|++||+++++......... .....+.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 9988888889999999999999875 79999999999999999876543322110 0112455
Q ss_pred CCceEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEE------------------EEEcC--CCCEEE
Q 002266 195 SSMNVLSWS-PDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICF------------------LSWSP--NGKYMA 253 (945)
Q Consensus 195 ~~i~~l~~s-pdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~------------------l~fSp--dg~~La 253 (945)
..+.++.|+ |+|+.|++++.|+.+++||+..+.....+.. |...+.. ..|+| ++.+++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD-STMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee-ecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 678888887 7999999999999999999987765544433 3222222 33443 445677
Q ss_pred EEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 254 TSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 254 sgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
+|+.||.|+|||+.++..+.. ..|...|.+++|+|+|++||+++.+| +.+|.+
T Consensus 334 sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 888899999999998876654 66788999999999999999998777 555554
No 114
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.3e-28 Score=285.96 Aligned_cols=245 Identities=12% Similarity=0.097 Sum_probs=200.7
Q ss_pred CCCCCEEEEEECCC------CCEEEEEEcCCCeEEEEcCCCCccc----------cccccccccceEEEEEecCCCEEEE
Q 002266 15 GNAASFCSILWDQQ------AHHLVTASSSETTISIHDPLLPSNL----------PKILRHHRDGVTALALSPNSTCLAS 78 (945)
Q Consensus 15 gh~~~V~svafspd------g~~L~t~g~~dg~V~IWd~~~~~~~----------~~~l~~h~~~V~~la~spdg~~Las 78 (945)
+|.+.|.+|+|+|+ +.+||+++ .||+|+|||+..+... ...+.+|...|++++|++++ .|++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s-~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las 282 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVS-QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC 282 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEE-TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEe-cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE
Confidence 45578999999997 56888776 9999999998765311 23567899999999999864 8999
Q ss_pred EEcCCcEEEEEcCCCe-eeeecccCCCCEEEE--EEecCC-CEEEEEECCCcEEEEEcCCCeEEEEEecCCC--CEEEEE
Q 002266 79 GSIDHSVKLYKFPGGE-FQTNITRFTLPIRVL--AFNKSG-SMLAAAGDDEGIKLINTIDGSIARVLKGHKG--PVTGLA 152 (945)
Q Consensus 79 gs~Dg~V~iwdl~~g~-~~~~l~~~~~~V~~l--~fspdg-~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~--~V~~la 152 (945)
|+.||+|++||+.++. ....+..|...|.++ +|++++ .+||+|+.|++|+|||+++++....+.+|.. .|.+++
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEE
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceE
Confidence 9999999999998764 344577899999999 578887 8999999999999999998877767777653 588999
Q ss_pred EccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCC-----c
Q 002266 153 FDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA-----E 227 (945)
Q Consensus 153 fspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~-----~ 227 (945)
|+|++..|++++.|++|++||++++..+..+. .|...|++++|+|+|++|++|+.|+.|++||+... +
T Consensus 363 fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-------gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~ 435 (524)
T 2j04_B 363 YCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV-------SRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIK 435 (524)
T ss_dssp EETTTTEEEEECSSSEEEEEETTCTTCCEEEE-------ECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC-
T ss_pred eCCCcCeEEEeCCCCcEEEEECcccccceeee-------cCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccc
Confidence 99999999999999999999999987766654 35678999999999999999999999999985321 0
Q ss_pred ---------EE------------------------------EeecCCCCCCeEEEEEcCCC---CEEEEEECCCeEEEEE
Q 002266 228 ---------KL------------------------------FSLRGDHVQPICFLSWSPNG---KYMATSSLDRQILIWD 265 (945)
Q Consensus 228 ---------~~------------------------------~~~~~~h~~~I~~l~fSpdg---~~Lasgs~Dg~I~IWD 265 (945)
.+ ..+. .|...|.+|+|+|++ .+||+|+.||.|+||+
T Consensus 436 ~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~-gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 436 NSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKID-AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp -----CCCCEEEECBCCSSSCEEEECCCCCCCC--------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred cCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeec-CCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 01 1112 267789999999985 4999999999999999
Q ss_pred CCCC
Q 002266 266 VGKK 269 (945)
Q Consensus 266 ~~~~ 269 (945)
+...
T Consensus 515 l~~~ 518 (524)
T 2j04_B 515 LSLE 518 (524)
T ss_dssp CSCC
T ss_pred cccc
Confidence 8654
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=5e-26 Score=249.16 Aligned_cols=242 Identities=21% Similarity=0.330 Sum_probs=207.4
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG- 93 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g- 93 (945)
+|...|++++|+|+|++|++++ .|++|+||++.++ .....+.+|...+.++.+ ++..|++++.++.+++|+...+
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs-~Dg~v~iw~~~~~-~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGT-SSAEVQLWDVQQQ-KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEE-TTSEEEEEETTTT-EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS
T ss_pred CCCCeEEEEEECCCCCEEEEEE-CCCcEEEeecCCc-eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc
Confidence 4778899999999999999987 9999999999887 456677889888877655 5679999999999999998765
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCe----EEEEEecCCCCEEEEEEccCCCEE---EEEeCC
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS----IARVLKGHKGPVTGLAFDPNSEYL---ASIDSI 166 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~----~~~~l~~h~~~V~~lafspdg~~L---as~s~D 166 (945)
.....+..|...+..+.+++++++|++++.|+.|++||+.+++ .......|.+.|.+++++|.+..+ ++++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 4456678899999999999999999999999999999998764 345566788999999999976533 456778
Q ss_pred CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEeecCCCCCCeEEEE
Q 002266 167 GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG--LKNDVVMYDRDTAEKLFSLRGDHVQPICFLS 244 (945)
Q Consensus 167 g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs--~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~ 244 (945)
+.|++||........... +...+..++|+|++..+++++ .|+.|++||+.+++++..+.+ |...|++++
T Consensus 221 ~~i~lwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g-H~~~V~~l~ 291 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVD--------AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-HTSRVLSLT 291 (318)
T ss_dssp CEEEEEETTTCCEEEEEE--------CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-CSSCEEEEE
T ss_pred CEEEEEeccccccccccc--------ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC-CCCCEEEEE
Confidence 999999998887665543 235678899999999887754 689999999999999999987 999999999
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCC
Q 002266 245 WSPNGKYMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 245 fSpdg~~Lasgs~Dg~I~IWD~~~~ 269 (945)
|+|+|++||+|+.||+|+|||+...
T Consensus 292 ~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 292 MSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp ECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999999999998754
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=1.7e-26 Score=266.95 Aligned_cols=251 Identities=20% Similarity=0.312 Sum_probs=204.3
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|.+++| ++++|++++ .||.|++||+.++ .....+.+|...|.+++|++ .+|++|+.||.|++||+.++.
T Consensus 171 ~h~~~v~~l~~--~~~~l~sg~-~dg~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 171 GHTGSVLCLQY--DERVIITGS-SDSTVRVWDVNTG-EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT 244 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEE-TTSCEEEEESSSC-CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSS
T ss_pred CCCCcEEEEEE--CCCEEEEEc-CCCeEEEEECCCC-cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCC
Confidence 67799999999 788898887 9999999999877 45667788999999999974 599999999999999998876
Q ss_pred ee---eecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 002266 95 FQ---TNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIY 171 (945)
Q Consensus 95 ~~---~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~i 171 (945)
.. ..+..|...|.+++| ++.+|++|+.||.|++||+.++..+..+.+|...|.+++|+ +.+|++++.||.|++
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~i 320 (435)
T 1p22_A 245 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRL 320 (435)
T ss_dssp CCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred CceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEE
Confidence 54 567788999999999 78899999999999999999999999999999999999994 689999999999999
Q ss_pred EEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------EEEeecCCCCCCeEE
Q 002266 172 WELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE---------KLFSLRGDHVQPICF 242 (945)
Q Consensus 172 wDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~---------~~~~~~~~h~~~I~~ 242 (945)
||+++++.+..+. .|...+.+++| ++.+|++|+.||.|++||+.++. .+..+.+ |...|.+
T Consensus 321 wd~~~~~~~~~~~-------~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-h~~~v~~ 390 (435)
T 1p22_A 321 WDIECGACLRVLE-------GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE-HSGRVFR 390 (435)
T ss_dssp EETTTCCEEEEEC-------CCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC-CSSCCCC
T ss_pred EECCCCCEEEEEe-------CCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccC-CCCCeEE
Confidence 9999998887765 34567888888 78999999999999999997665 6777776 9999999
Q ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEe
Q 002266 243 LSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWK 287 (945)
Q Consensus 243 l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~s 287 (945)
++| ++.+|++++.||.|+|||+.+...........+..++.|.
T Consensus 391 l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 391 LQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp EEE--CSSCEEECCSSSEEEEEC----------------------
T ss_pred EEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCCCCCccceeee
Confidence 999 7889999999999999999887665554444555555554
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.3e-27 Score=271.17 Aligned_cols=257 Identities=12% Similarity=0.044 Sum_probs=202.3
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|.+|+|+|+| .++.+.+|+.... ....+ .|...|.+++|+|+|.+||+++.||.|++|+...
T Consensus 50 gh~~~v~~V~FsPdg--------~~~~~~~~~~~~~--~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-- 116 (588)
T 2j04_A 50 CNSKNLFHVKEFPLE--------FENKLDFELAQQN--GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-- 116 (588)
T ss_dssp SBGGGTEEEEEECCC--------CCCTTTTSCCCSS--CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--
T ss_pred CCCccEEEEEECCCC--------CcceEEEEeCCCc--eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--
Confidence 677999999999999 3555556654321 12222 5588999999999999999999999999999543
Q ss_pred eeeecccCCC-----CEEEEEEecCCCEEEEEECCCcEEEEEcCCCe-------EEEEE----ecCCCCEEEEEEccCCC
Q 002266 95 FQTNITRFTL-----PIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS-------IARVL----KGHKGPVTGLAFDPNSE 158 (945)
Q Consensus 95 ~~~~l~~~~~-----~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~-------~~~~l----~~h~~~V~~lafspdg~ 158 (945)
+...+. |.. .+.+++|||+|++||+|+.||+|++||+.++. .+.++ .+|...|.+++|+|+|
T Consensus 117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg- 194 (588)
T 2j04_A 117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV- 194 (588)
T ss_dssp EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence 555566 554 59999999999999999999999999998875 35666 5677899999999999
Q ss_pred EEEEEeCCCcEEEEEccCCeee---eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC
Q 002266 159 YLASIDSIGTVIYWELQSGREL---HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD 235 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i---~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~ 235 (945)
+++++.|+.|++||+..+... ..+.. .|...|.+++|+ |+.|++++ ++.|++||+.+++......+
T Consensus 195 -Laass~D~tVrlWd~~~~~~~~~~~tL~~------~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~g- 263 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVSASSHQPVSRMIQN------ASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTG- 263 (588)
T ss_dssp -EEEEETTCCEEEECCCSSSSCCCEEEEEC------CCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECS-
T ss_pred -EEEEeCCCeEEEEECCCCccccceeeecc------cccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcC-
Confidence 888899999999999877632 23321 344678899999 68999887 69999999998776433335
Q ss_pred CCCCeEEEEE--cCCCCEEEEEECCCeEEEEECCCCe------e-----------------eeeccCCCCeeEEEEecCC
Q 002266 236 HVQPICFLSW--SPNGKYMATSSLDRQILIWDVGKKL------D-----------------IDRQKFDDRICCMAWKPIG 290 (945)
Q Consensus 236 h~~~I~~l~f--Spdg~~Lasgs~Dg~I~IWD~~~~~------~-----------------i~~~~~~~~V~~la~spdg 290 (945)
|...|..++| +|++..|++++.||. ++|..+.-. . +........|.+++|+|+|
T Consensus 264 h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG 342 (588)
T 2j04_A 264 SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDG 342 (588)
T ss_dssp CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTS
T ss_pred CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCC
Confidence 9999999999 999999999999999 999874211 1 0111112248999999999
Q ss_pred CEEEEEEc
Q 002266 291 NALAVIDV 298 (945)
Q Consensus 291 ~~Las~s~ 298 (945)
+.+|+++.
T Consensus 343 ~~lA~~~~ 350 (588)
T 2j04_A 343 YSIAIVYD 350 (588)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEe
Confidence 99998853
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.9e-26 Score=264.56 Aligned_cols=241 Identities=12% Similarity=0.096 Sum_probs=204.2
Q ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe---eeeeccc------------------------------------
Q 002266 61 RDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE---FQTNITR------------------------------------ 101 (945)
Q Consensus 61 ~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~---~~~~l~~------------------------------------ 101 (945)
..++.+++|+++|++|+++ .++.|++||+.+|+ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999966665 57899999998887 4444332
Q ss_pred ------------------CCCCEEEEEEecCCCEE-EEEECCCcEEEEEcC--CCeEEEEEe--cCCCCEEEEEEccCCC
Q 002266 102 ------------------FTLPIRVLAFNKSGSML-AAAGDDEGIKLINTI--DGSIARVLK--GHKGPVTGLAFDPNSE 158 (945)
Q Consensus 102 ------------------~~~~V~~l~fspdg~~L-asgs~Dg~I~iwd~~--~~~~~~~l~--~h~~~V~~lafspdg~ 158 (945)
|...|++++|+|++++| ++++.|+.|++||+. ++..+..+. .|...|.+++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 22369999999999996 888899999999999 788777776 5778999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCeeee-eecccCCCCCCCCCCceEEEEcCC---CCEEEEEeCCCeEEEEECCCCcEEEeecC
Q 002266 159 YLASIDSIGTVIYWELQSGRELH-NLKRVAPDIGSDPSSMNVLSWSPD---GETLAVPGLKNDVVMYDRDTAEKLFSLRG 234 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i~-~~~~~~~~~~~~~~~i~~l~~spd---g~~La~gs~dg~I~vwD~~t~~~~~~~~~ 234 (945)
+|++++.+|.|++|++.++.... .. .....|...|.+++|+|+ +++|++++.|+.|++||+.+++.+..+..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQ----EPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCC----CCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred EEEEEeCCCcEEEEecCCcccccccc----eeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence 99999999999999998876443 11 112245678999999999 99999999999999999999988877554
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc--------------------------CCCCeeEEEEec
Q 002266 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK--------------------------FDDRICCMAWKP 288 (945)
Q Consensus 235 ~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~--------------------------~~~~V~~la~sp 288 (945)
.|...|.+++|+ +|++|++++.|+.|+|||+.+++.+.... ....|.+++|+|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 599999999999 99999999999999999999988766532 235689999999
Q ss_pred CCCEEEEEE-cCCeEEEEec
Q 002266 289 IGNALAVID-VMGKYGVWES 307 (945)
Q Consensus 289 dg~~Las~s-~DG~I~iWd~ 307 (945)
++++|++++ .++.|++|++
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe
Confidence 999999998 8999999999
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.1e-25 Score=250.94 Aligned_cols=250 Identities=15% Similarity=0.249 Sum_probs=206.9
Q ss_pred cccccccccccceEEEEEecC---CCEEEEEEcCCcEEEEEcCC-Ceee-eecccCCCCEEEEEEecCCCEEEEEECCCc
Q 002266 52 NLPKILRHHRDGVTALALSPN---STCLASGSIDHSVKLYKFPG-GEFQ-TNITRFTLPIRVLAFNKSGSMLAAAGDDEG 126 (945)
Q Consensus 52 ~~~~~l~~h~~~V~~la~spd---g~~Lasgs~Dg~V~iwdl~~-g~~~-~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~ 126 (945)
.....+.+|.+.|++++|+|+ |.+|++|+.||.|++|++.+ +... ..+..|...|.+++|+|++++|++++.||.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 445677899999999999998 69999999999999999987 5444 677889999999999999999999999999
Q ss_pred EEEEEcCCCeEEEEEecCCCCEEEEEE--ccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC
Q 002266 127 IKLINTIDGSIARVLKGHKGPVTGLAF--DPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP 204 (945)
Q Consensus 127 I~iwd~~~~~~~~~l~~h~~~V~~laf--spdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp 204 (945)
|++||+.++.... +..|...|.+++| +|++.+|++++.||.|++||+++++.+..+... ..+.++.+.
T Consensus 110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--------~~~~~~~~~- 179 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP--------ERCYCADVI- 179 (368)
T ss_dssp EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS--------SCEEEEEEE-
T ss_pred EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC--------CCceEEEec-
Confidence 9999999988665 5679999999999 899999999999999999999998877776532 234444444
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEe-ecCCCCCCeEEEEEcCCCCE----EEEEECCCeEEEEECCCCe---eeee-c
Q 002266 205 DGETLAVPGLKNDVVMYDRDTAEKLFS-LRGDHVQPICFLSWSPNGKY----MATSSLDRQILIWDVGKKL---DIDR-Q 275 (945)
Q Consensus 205 dg~~La~gs~dg~I~vwD~~t~~~~~~-~~~~h~~~I~~l~fSpdg~~----Lasgs~Dg~I~IWD~~~~~---~i~~-~ 275 (945)
+..+++++.++.+.+|++........ +...+...+.++++.+++.. +++++.||.|+||++.... .+.. .
T Consensus 180 -~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 180 -YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp -TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred -CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 55888889999999999987664433 33335567777777776655 9999999999999998863 2222 2
Q ss_pred cCCC------------CeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 276 KFDD------------RICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 276 ~~~~------------~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
.|.. .|++++|+|++++|++++.||.|++||+..+..
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred eeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE
Confidence 3332 699999999999999999999999999886654
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.2e-24 Score=246.65 Aligned_cols=244 Identities=13% Similarity=0.162 Sum_probs=203.9
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCCCeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~g~~~ 96 (945)
..+.+++|+|+|++|+++++.++.|++||..++. ....+..+ ..+.+++|+|++++|++++ .++.|++||+.+++..
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~-~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-VIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCe-EEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEE
Confidence 5699999999999987776689999999987763 34444444 3899999999999886555 5699999999999887
Q ss_pred eecccCCCCEEEEEEecCCCEE-EEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEEc
Q 002266 97 TNITRFTLPIRVLAFNKSGSML-AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYL-ASIDSIGTVIYWEL 174 (945)
Q Consensus 97 ~~l~~~~~~V~~l~fspdg~~L-asgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~L-as~s~Dg~I~iwDl 174 (945)
..+.. ...+.+++|+|+++.| ++++.++.|++||+.+++....+..+ ..+.+++|+|++++| ++++.++.|++||+
T Consensus 110 ~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 110 GTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp EEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 77664 4578999999999987 67777999999999999988888765 567999999999987 56778899999999
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe---CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCE
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG---LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs---~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~ 251 (945)
++++.+..+.. ...+.+++|+|+|++|++++ .++.|++||+.+++.+..+.. + ..+.+++|+|+|++
T Consensus 188 ~~~~~~~~~~~--------~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~-~~~~~~~~s~dg~~ 257 (391)
T 1l0q_A 188 VTNSVIDTVKV--------EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-G-PDPAGIAVTPDGKK 257 (391)
T ss_dssp TTTEEEEEEEC--------SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-C-SSEEEEEECTTSSE
T ss_pred CCCeEEEEEec--------CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec-C-CCccEEEEccCCCE
Confidence 99887766542 24578899999999999988 689999999999988888775 3 45789999999998
Q ss_pred E-EEEECCCeEEEEECCCCeeeeec
Q 002266 252 M-ATSSLDRQILIWDVGKKLDIDRQ 275 (945)
Q Consensus 252 L-asgs~Dg~I~IWD~~~~~~i~~~ 275 (945)
| ++++.|+.|++||+.+++.+...
T Consensus 258 l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 258 VYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCcEEEEE
Confidence 7 56678999999999998877654
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.3e-26 Score=257.27 Aligned_cols=231 Identities=12% Similarity=0.111 Sum_probs=190.4
Q ss_pred EEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC---------CCeEE
Q 002266 68 ALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI---------DGSIA 138 (945)
Q Consensus 68 a~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~---------~~~~~ 138 (945)
.+.+++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|+.|++|+.. ++..+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 445678899999999999999999998777665 456778888887 9999999999999665 44444
Q ss_pred EEEe-cCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC
Q 002266 139 RVLK-GHKGPVTGLAFDP--NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215 (945)
Q Consensus 139 ~~l~-~h~~~V~~lafsp--dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d 215 (945)
..+. .|...|.+++|+| ++++|++++.||.|++||+++++.+..... .+...+.+++|+|+|.+|++|+.|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~------~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA------KSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC------CSSCCCCEEEECTTSCEEEEECTT
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec------CCCCceEEEEECCCCCEEEEEcCC
Confidence 4444 6778999999999 999999999999999999999887554432 234568999999999999999999
Q ss_pred CeEEEEECCCCcEE-EeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc----CCCCe--eEEEEec
Q 002266 216 NDVVMYDRDTAEKL-FSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK----FDDRI--CCMAWKP 288 (945)
Q Consensus 216 g~I~vwD~~t~~~~-~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~----~~~~V--~~la~sp 288 (945)
+.|++||+++++.+ ..+...|..+|++++|+|+|.+|++++ ++.|+|||++++..+.... +...+ .+++|+|
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 99999999999877 677655899999999999999999999 5599999999887654422 22233 4699999
Q ss_pred CCCEEEEEEc-CCeEEEEecCCC
Q 002266 289 IGNALAVIDV-MGKYGVWESVVP 310 (945)
Q Consensus 289 dg~~Las~s~-DG~I~iWd~~~~ 310 (945)
+|++|++++. |+.|++|+....
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEecCCCCcEEEEEEccc
Confidence 9999999998 999999998543
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.9e-25 Score=251.67 Aligned_cols=246 Identities=13% Similarity=0.160 Sum_probs=189.7
Q ss_pred EEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEE-EEEE
Q 002266 44 IHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML-AAAG 122 (945)
Q Consensus 44 IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~L-asgs 122 (945)
||.+.+. ........|...|++++|+|||++|++|+.++ +++|++.+++...... ...+..+.+.++++.+ ++++
T Consensus 3 i~s~~~~-~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITR-NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECS
T ss_pred ccccccc-CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEEC
Confidence 3444433 33445678999999999999999999988775 7899998876654433 2357788899988887 4567
Q ss_pred CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCC-eeeeeecccCCCCCCCCCCceEEE
Q 002266 123 DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG-RELHNLKRVAPDIGSDPSSMNVLS 201 (945)
Q Consensus 123 ~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~-~~i~~~~~~~~~~~~~~~~i~~l~ 201 (945)
.|+.|++||+.+++.+..+. +...|.+++|+++. ++++ .++.|++||+.++ +.+..+.. ....++
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----------~~~~~~ 144 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----------FGGVCE 144 (355)
T ss_dssp STTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----------EEEEEE
T ss_pred CccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----------CCceEE
Confidence 78899999999999988887 67799999999764 4443 4789999999987 55544432 234566
Q ss_pred EcCCCCEEEE--EeCCCeEEEEECCCCc---------------E-EEeecCCCCCCeEEEEEcCCCCEEEEEECCCe-EE
Q 002266 202 WSPDGETLAV--PGLKNDVVMYDRDTAE---------------K-LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQ-IL 262 (945)
Q Consensus 202 ~spdg~~La~--gs~dg~I~vwD~~t~~---------------~-~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~-I~ 262 (945)
+++ .++++ |+.+|.|++||+.++. + +..+.+ |...|++++|+|+|++||+|+.||+ |+
T Consensus 145 ~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~ 221 (355)
T 3vu4_A 145 FSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIR 221 (355)
T ss_dssp EET--TEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEE
T ss_pred EEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEE
Confidence 777 66666 5789999999999765 1 566665 9999999999999999999999998 99
Q ss_pred EEECCCCeeeeecc---CCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCC
Q 002266 263 IWDVGKKLDIDRQK---FDDRICCMAWKPIGNALAVIDVMGKYGVWESVVP 310 (945)
Q Consensus 263 IWD~~~~~~i~~~~---~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~ 310 (945)
|||+.+++.+.... |...|++++|+|++++|++++.||.|++|++..+
T Consensus 222 iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 222 VFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 99999998888764 8899999999999999999999999999998754
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=8.5e-25 Score=251.30 Aligned_cols=284 Identities=11% Similarity=0.070 Sum_probs=229.5
Q ss_pred CCCEEEEE---ECCCCCEEEEEEc-------------CCC--eEEEEcCCCCc-cccccccccccceEEEEEecCCCEEE
Q 002266 17 AASFCSIL---WDQQAHHLVTASS-------------SET--TISIHDPLLPS-NLPKILRHHRDGVTALALSPNSTCLA 77 (945)
Q Consensus 17 ~~~V~sva---fspdg~~L~t~g~-------------~dg--~V~IWd~~~~~-~~~~~l~~h~~~V~~la~spdg~~La 77 (945)
...+..++ |+|++..+++.+. .++ .|.+||...+. .....+.. ...+.+++|+|++.+++
T Consensus 60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~ 138 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKT-GFQPKSVRFIDNTRLAI 138 (433)
T ss_dssp TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEEC-SSCBCCCEESSSSEEEE
T ss_pred CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcC-CCCceEEEEeCCCeEEE
Confidence 35678888 9999887776532 222 44444443221 22223333 34566999999777888
Q ss_pred EEEcCCcEEEEEcCCCeeee-----ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEE
Q 002266 78 SGSIDHSVKLYKFPGGEFQT-----NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152 (945)
Q Consensus 78 sgs~Dg~V~iwdl~~g~~~~-----~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~la 152 (945)
+++.++.|++||+.+++... .+..|...|.+++|++++.++++++.|+.|++||+.+++.+..+..|...+.+++
T Consensus 139 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 218 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILL 218 (433)
T ss_dssp EBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEE
T ss_pred EeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEE
Confidence 88888999999999988776 4456788999999999999999999999999999999999999989999999999
Q ss_pred EccCCCEEEEEe-CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe--------CCCeEEEEEC
Q 002266 153 FDPNSEYLASID-SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG--------LKNDVVMYDR 223 (945)
Q Consensus 153 fspdg~~Las~s-~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs--------~dg~I~vwD~ 223 (945)
|+|+++++++++ .++.|++||+++++.+..+.. ...+.+++|+|+|++|++++ .++.|++||+
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 999999885554 799999999999887766542 23478999999999999987 4889999999
Q ss_pred CCCcEEEeecCCCCCCeEEEEEcCCCCEE-EEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEc----
Q 002266 224 DTAEKLFSLRGDHVQPICFLSWSPNGKYM-ATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDV---- 298 (945)
Q Consensus 224 ~t~~~~~~~~~~h~~~I~~l~fSpdg~~L-asgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~---- 298 (945)
.+++.+..+. +...+..++|+|+|+++ ++++.|+.|++||+.+++.+....+...+.+++|+|++++|++++.
T Consensus 291 ~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 368 (433)
T 3bws_A 291 DKEKLIDTIG--PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNH 368 (433)
T ss_dssp TTTEEEEEEE--EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCC
T ss_pred CCCcEEeecc--CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCc
Confidence 9988776653 55688999999999755 6668899999999999998888888889999999999999888876
Q ss_pred -----------CCeEEEEecCCCC
Q 002266 299 -----------MGKYGVWESVVPS 311 (945)
Q Consensus 299 -----------DG~I~iWd~~~~~ 311 (945)
||.|++||.....
T Consensus 369 ~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 369 PTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp TTTCTTSCCSSCCEEEEEETTTTE
T ss_pred cccccccccccceEEEEEECCCCc
Confidence 5799999986544
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=1.1e-24 Score=239.41 Aligned_cols=277 Identities=14% Similarity=0.140 Sum_probs=193.9
Q ss_pred CEEEEEECCCCC---EEEEEEcCCCeEEEEcCCCCc--cccccccccccceEEEEEecCCCEEE-EEEcC---CcEEEEE
Q 002266 19 SFCSILWDQQAH---HLVTASSSETTISIHDPLLPS--NLPKILRHHRDGVTALALSPNSTCLA-SGSID---HSVKLYK 89 (945)
Q Consensus 19 ~V~svafspdg~---~L~t~g~~dg~V~IWd~~~~~--~~~~~l~~h~~~V~~la~spdg~~La-sgs~D---g~V~iwd 89 (945)
.|+++-|-.-|- .+++++ ...|++|+..... ....+...|..+|..+.+.||..-|+ ++-.+ +.|+..-
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~--~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla 118 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC--EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALF 118 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE--SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEEC
T ss_pred EEeeeeeccCCCCccEEEEec--cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEE
Confidence 467777765554 566766 7799999987753 45667778888888888888653222 22211 1111111
Q ss_pred cC-C----CeeeeecccCCCCEEEEEEecCCCEEEEEE--CCCcEEEEEc-CCCeEEEEEecCCCCEEEEEEcc---CCC
Q 002266 90 FP-G----GEFQTNITRFTLPIRVLAFNKSGSMLAAAG--DDEGIKLINT-IDGSIARVLKGHKGPVTGLAFDP---NSE 158 (945)
Q Consensus 90 l~-~----g~~~~~l~~~~~~V~~l~fspdg~~Lasgs--~Dg~I~iwd~-~~~~~~~~l~~h~~~V~~lafsp---dg~ 158 (945)
+. . ++... ..++...|..+ ++++++.+++ .|+.|++|++ .+++.+..+..|...+..++|++ ++.
T Consensus 119 ~spd~~~~~~~l~-s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 119 CSSDDESEKQVLL-KSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp C------CCEEEE-EEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTT
T ss_pred ECCCccccccEEE-eCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCc
Confidence 11 1 11111 12222233333 4555555543 5899999999 45888888889999999999999 779
Q ss_pred EEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE------------EEEeCCCeEEEEECCCC
Q 002266 159 YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL------------AVPGLKNDVVMYDRDTA 226 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L------------a~gs~dg~I~vwD~~t~ 226 (945)
+|++++.|++|+|||+.+++.++++..+. .+...+.+++|+|+|.++ ++|+.|++|++||..++
T Consensus 195 ~LaSgS~D~TIkIWDl~TGk~l~tL~g~~----~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTGQLLKKMHIDD----SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCC-------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred eEEEecCCCcEEEEECCCCcEEEEEcCCC----cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 99999999999999999999999886421 112457788999999887 45778899999999999
Q ss_pred cEEEee----cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc-CCCCe-eEEEEecCCCEEEEEEcCC
Q 002266 227 EKLFSL----RGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK-FDDRI-CCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 227 ~~~~~~----~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~-~~~~V-~~la~spdg~~Las~s~DG 300 (945)
+.+..+ +..|...+.+..+ ++.++|+++.|++|+|||+.+++.+.... |...+ .+++|+|+|++|++|+.|+
T Consensus 271 k~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred EEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 876554 2336555544444 48899999999999999999999988854 65554 4689999999999999999
Q ss_pred eEEEEec
Q 002266 301 KYGVWES 307 (945)
Q Consensus 301 ~I~iWd~ 307 (945)
+|+|||.
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9999985
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=5.5e-26 Score=259.74 Aligned_cols=243 Identities=11% Similarity=0.086 Sum_probs=179.2
Q ss_pred EEEECCCCCEEEEEEcCCCeEEEEcCCCCcc----ccccccccccceEEEEEec--------CCCEEEEEEcCCcEEEEE
Q 002266 22 SILWDQQAHHLVTASSSETTISIHDPLLPSN----LPKILRHHRDGVTALALSP--------NSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 22 svafspdg~~L~t~g~~dg~V~IWd~~~~~~----~~~~l~~h~~~V~~la~sp--------dg~~Lasgs~Dg~V~iwd 89 (945)
...+++++.+|++++ .|++|+|||...+.. ....+.+|.+.|++++|+| |+++||+|+.|++|+|||
T Consensus 94 ~~~~~~~~~~las~~-~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 94 VNSSPVYSLFLACVC-QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp ---CCEEEEEEEEEE-TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred eeecCCCCCEEEEEe-CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 333445566677775 999999999876532 2345789999999999998 789999999999999999
Q ss_pred cCCCeeeeecccCCCCEEEEEEecCC-CEEEEEECCCcEEEEEcCCCeEEEE-------------------------Eec
Q 002266 90 FPGGEFQTNITRFTLPIRVLAFNKSG-SMLAAAGDDEGIKLINTIDGSIARV-------------------------LKG 143 (945)
Q Consensus 90 l~~g~~~~~l~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~iwd~~~~~~~~~-------------------------l~~ 143 (945)
+.++.....+..|..+|.+++|+|++ .+|++|+.|+.|++||+.++..... ..+
T Consensus 173 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 99888888888899999999999987 4799999999999999987654322 235
Q ss_pred CCCCEEEEEEc-cCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCC-----------CCCCCceEEEEcC--CCCEE
Q 002266 144 HKGPVTGLAFD-PNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG-----------SDPSSMNVLSWSP--DGETL 209 (945)
Q Consensus 144 h~~~V~~lafs-pdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~-----------~~~~~i~~l~~sp--dg~~L 209 (945)
|...|.++.|+ |+++.|++++.|+++++||+..+.....+..+..... ..........|+| ++.++
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 77888999987 7999999999999999999988765544432211100 0011222344555 44566
Q ss_pred EEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q 002266 210 AVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG 267 (945)
Q Consensus 210 a~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~ 267 (945)
++|+.||.|++||..++.....+.. |..+|.+++|+|+|++||+++.+| +.+|.+.
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~~~~~~-~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEETTTTEEEEEETTCTTCCEEEEE-CSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEECCCCEEEEEECCCCcEEEEecC-CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 7788899999999999988777665 778999999999999999999666 6666653
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=6.1e-24 Score=244.82 Aligned_cols=278 Identities=15% Similarity=0.145 Sum_probs=218.0
Q ss_pred CCEEEEEECCCCCEEE-EEE---cCCC----eEEEEcC--CCCccc-cccccccccceEEEEEec--------------C
Q 002266 18 ASFCSILWDQQAHHLV-TAS---SSET----TISIHDP--LLPSNL-PKILRHHRDGVTALALSP--------------N 72 (945)
Q Consensus 18 ~~V~svafspdg~~L~-t~g---~~dg----~V~IWd~--~~~~~~-~~~l~~h~~~V~~la~sp--------------d 72 (945)
..|...+|++.|..++ +++ ..+| .|+|||+ .++..+ ...+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4677788999887665 443 2467 8999999 776432 245677888888777765 1
Q ss_pred CCEEEEEEcC------CcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCC---cEEEEEcCCCeEEEEEec
Q 002266 73 STCLASGSID------HSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE---GIKLINTIDGSIARVLKG 143 (945)
Q Consensus 73 g~~Lasgs~D------g~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg---~I~iwd~~~~~~~~~l~~ 143 (945)
+..++.++.+ +.|++||+.. .....+..|...+.+++|+|+|++|++++.++ .|++||+.+++.. .+..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eeec
Confidence 5667766654 7999999974 44667777889999999999999999999875 8999999988765 5667
Q ss_pred CCCCEEEEEEccCCCEEE-EEeCCCc--EEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC-C--e
Q 002266 144 HKGPVTGLAFDPNSEYLA-SIDSIGT--VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-N--D 217 (945)
Q Consensus 144 h~~~V~~lafspdg~~La-s~s~Dg~--I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d-g--~ 217 (945)
|...+.+++|+|+|++|+ +++.++. |++||+.+++.. .+. .+...+.+++|+|+|++|++++.+ + .
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~-------~~~~~~~~~~~spdg~~l~~~s~~~g~~~ 292 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT-------DGRSNNTEPTWFPDSQNLAFTSDQAGRPQ 292 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC-------CCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc-------CCCCcccceEECCCCCEEEEEECCCCCcE
Confidence 888999999999999887 5665554 999999887652 222 234568899999999999988763 4 6
Q ss_pred EEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECC---CeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEE
Q 002266 218 VVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD---RQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALA 294 (945)
Q Consensus 218 I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D---g~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~La 294 (945)
|++||+.+++.. .+.. +...+..++|+|+|++|++++.+ ..|++||+.++.......+. .+.+++|+|+|+.|+
T Consensus 293 i~~~d~~~~~~~-~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 293 VYKVNINGGAPQ-RITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVI 369 (415)
T ss_dssp EEEEETTSSCCE-ECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEE
T ss_pred EEEEECCCCCEE-EEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEE
Confidence 888899887643 3333 56688899999999999988764 58999999998876554443 899999999999999
Q ss_pred EEEcCC---eEEEEecC
Q 002266 295 VIDVMG---KYGVWESV 308 (945)
Q Consensus 295 s~s~DG---~I~iWd~~ 308 (945)
+++.++ .|++|++.
T Consensus 370 ~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp EEEEETTEEEEEEEETT
T ss_pred EEEcCCCccEEEEEECC
Confidence 988777 79999975
No 127
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=5.9e-22 Score=220.34 Aligned_cols=276 Identities=13% Similarity=0.126 Sum_probs=221.2
Q ss_pred CCCEEEEEECCCCCEEEEEEcC------CCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEE-EcCCcEEEEE
Q 002266 17 AASFCSILWDQQAHHLVTASSS------ETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG-SIDHSVKLYK 89 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~------dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasg-s~Dg~V~iwd 89 (945)
...+..++|+|+|++|++++.. ++.|.+||..+.. ....+.. ...+.+++|+|+|++++++ ..++.|.+||
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE-VTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC-EEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe-EEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3568899999999999888643 6789999988764 3333333 3457889999999966655 4579999999
Q ss_pred cCCCeeeeecccCCC---------CEEEEEEecCCCEEEEEE--CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCC
Q 002266 90 FPGGEFQTNITRFTL---------PIRVLAFNKSGSMLAAAG--DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSE 158 (945)
Q Consensus 90 l~~g~~~~~l~~~~~---------~V~~l~fspdg~~Lasgs--~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~ 158 (945)
..+++....+..+.. .+.+++|+|+|+++++++ .++.|.+||+.+++....+..+...+.+++|+|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 999988776654332 278899999999888876 478899999999998888876666788999999999
Q ss_pred EEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC-CCeEEEEECCCCcEEEeecCCCC
Q 002266 159 YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL-KNDVVMYDRDTAEKLFSLRGDHV 237 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~-dg~I~vwD~~t~~~~~~~~~~h~ 237 (945)
+|++++.++.|.+||+.+++.+..+.... ..+...+..++|+|+|+++++++. ++.|.+||..+++.+..+....
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 273 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLD---DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE- 273 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCC---CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-
Confidence 99999999999999999998877665311 112345678999999998877765 4899999999999887776422
Q ss_pred CCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCC
Q 002266 238 QPICFLSWSPNGKYMATSS-LDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 238 ~~I~~l~fSpdg~~Lasgs-~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG 300 (945)
...++|+|+|+++++++ .++.|.+||+.+++.+........+.+++|+|+|++|+++..++
T Consensus 274 --~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 274 --SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp --CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred --CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 25699999999766665 68999999999999988877777899999999999888776654
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=3.5e-23 Score=227.53 Aligned_cols=244 Identities=13% Similarity=0.110 Sum_probs=176.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeE-EEEcCCCCc-----cccccccccccceEEEEEecCCCEEEEEE--cCCcEE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTI-SIHDPLLPS-----NLPKILRHHRDGVTALALSPNSTCLASGS--IDHSVK 86 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V-~IWd~~~~~-----~~~~~l~~h~~~V~~la~spdg~~Lasgs--~Dg~V~ 86 (945)
+|..+|..|++.||...|++..-.+-.+ .|+-+.... .......+|...|..+ ++++++.+++ .|+.|+
T Consensus 84 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~ 160 (356)
T 2w18_A 84 FAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVE 160 (356)
T ss_dssp CCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEE
T ss_pred ccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEE
Confidence 4667888999988777666543222111 222211110 1111123445445544 5666666643 599999
Q ss_pred EEEc-CCCeeeeecccCCCCEEEEEEec---CCCEEEEEECCCcEEEEEcCCCeEEEEEecCC---CCEEEEEEccCCCE
Q 002266 87 LYKF-PGGEFQTNITRFTLPIRVLAFNK---SGSMLAAAGDDEGIKLINTIDGSIARVLKGHK---GPVTGLAFDPNSEY 159 (945)
Q Consensus 87 iwdl-~~g~~~~~l~~~~~~V~~l~fsp---dg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~---~~V~~lafspdg~~ 159 (945)
+|++ ++|+.+..+..|...++.++|++ ++.+|++|+.|++|+|||+.+++.++++.+|. ..+.+++|+|+|.+
T Consensus 161 ~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~ 240 (356)
T 2w18_A 161 VMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLL 240 (356)
T ss_dssp EEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEE
T ss_pred EEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCE
Confidence 9999 55888888888999999999999 78999999999999999999999999998654 46788899999987
Q ss_pred E------------EEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Q 002266 160 L------------ASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE 227 (945)
Q Consensus 160 L------------as~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~ 227 (945)
+ ++|+.|++|++||..+++.+..+....+ ..+...+. ..+.++.++++++.|++|+|||+.+++
T Consensus 241 lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p--~Gh~~~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk 316 (356)
T 2w18_A 241 FIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP--PGQAGRFL--EGDVKDHCAAAILTSGTIAIWDLLLGQ 316 (356)
T ss_dssp EEEEC------------CCEEEEEEETTTTEEEEEEEECCC--TTCCCCEE--EEEEETTEEEEEETTSCEEEEETTTCS
T ss_pred EEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc--CCCcceeE--ccccCCCEEEEEcCCCcEEEEECCCCc
Confidence 6 5677899999999999988765432111 12222233 334448899999999999999999999
Q ss_pred EEEeecCCCCCC-eEEEEEcCCCCEEEEEECCCeEEEEEC
Q 002266 228 KLFSLRGDHVQP-ICFLSWSPNGKYMATSSLDRQILIWDV 266 (945)
Q Consensus 228 ~~~~~~~~h~~~-I~~l~fSpdg~~Lasgs~Dg~I~IWD~ 266 (945)
.+.++.+ |... +..++|||+|++|++|+.|++|+|||+
T Consensus 317 ~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 317 CTALLPP-VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEECC-C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEecC-CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999987 6554 556899999999999999999999995
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=5.6e-22 Score=219.12 Aligned_cols=281 Identities=11% Similarity=0.056 Sum_probs=206.8
Q ss_pred EEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEc-CCcEEEEEcCCCee-eeecc
Q 002266 23 ILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI-DHSVKLYKFPGGEF-QTNIT 100 (945)
Q Consensus 23 vafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~-Dg~V~iwdl~~g~~-~~~l~ 100 (945)
..|.+++.++++++..++.|.+||..++. ....+..+...+ +++|+|+|++|++++. ++.|.+||+.+++. ...+.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE-ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC-EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc-eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 45778888877777789999999988764 344444555666 9999999997777665 88999999998887 66666
Q ss_pred cCCCCEEEEEEecCCCEEEEEECCC---cEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEE-eCCCc-EEEEEcc
Q 002266 101 RFTLPIRVLAFNKSGSMLAAAGDDE---GIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI-DSIGT-VIYWELQ 175 (945)
Q Consensus 101 ~~~~~V~~l~fspdg~~Lasgs~Dg---~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~-s~Dg~-I~iwDl~ 175 (945)
.+..+..+++|+|+|++++++..++ .|.+||+.+++.+..+.. .....+++|+|+|++|+++ ..++. |.+|++.
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 6666665599999999999555553 899999999988877764 4557999999999866555 55578 9999997
Q ss_pred CCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcE---EEeecCCCCCCeEEEEEcCCCCE
Q 002266 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEK---LFSLRGDHVQPICFLSWSPNGKY 251 (945)
Q Consensus 176 t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~---~~~~~~~h~~~I~~l~fSpdg~~ 251 (945)
....+...... .. ........++|+|+|+++++++ .++.|.+||+.+++. +..+.. ...+..++|+|+|++
T Consensus 160 ~~g~~~~~~~~--~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 160 ADGVLFDTGQE--FI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT--NNLPGTIVVSRDGST 234 (331)
T ss_dssp TTCCEEEEEEE--EE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--SSCCCCEEECTTSSE
T ss_pred CCCcEeecCCc--cc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--CCCCceEEECCCCCE
Confidence 65433222100 00 1224468899999999776655 588999999998887 766663 367788999999998
Q ss_pred EEEEE-CCCeEEEEECCCCee--eeeccC-----C---CCeeEEEEecCCCEEEEEEc-CCeEEEEecCCCC
Q 002266 252 MATSS-LDRQILIWDVGKKLD--IDRQKF-----D---DRICCMAWKPIGNALAVIDV-MGKYGVWESVVPS 311 (945)
Q Consensus 252 Lasgs-~Dg~I~IWD~~~~~~--i~~~~~-----~---~~V~~la~spdg~~Las~s~-DG~I~iWd~~~~~ 311 (945)
|++++ .++.|.+||+.+++. +..... . .....++|+|++++|++++. ++.|.+|++..+.
T Consensus 235 l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 235 VYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 76665 478899999999877 222111 1 12356899999998876655 5699999986543
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=7e-22 Score=227.56 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=199.5
Q ss_pred CCEEEEEEcC--C---CeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCC---cEEEEEcCCCeeeeecc
Q 002266 29 AHHLVTASSS--E---TTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDH---SVKLYKFPGGEFQTNIT 100 (945)
Q Consensus 29 g~~L~t~g~~--d---g~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg---~V~iwdl~~g~~~~~l~ 100 (945)
+..+++++.. + +.|++||... .....+..|...|.+++|+|||++|++++.++ .|++||+.+++.. .+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g--~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG--YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS--CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC--CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 6667766532 2 7999999864 34567778999999999999999999999875 9999999988765 466
Q ss_pred cCCCCEEEEEEecCCCEEE-EEECCCc--EEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEEc
Q 002266 101 RFTLPIRVLAFNKSGSMLA-AAGDDEG--IKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS-IG--TVIYWEL 174 (945)
Q Consensus 101 ~~~~~V~~l~fspdg~~La-sgs~Dg~--I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~-Dg--~I~iwDl 174 (945)
.+...+.+++|+|+|++|+ +++.++. |++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|++||+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 6788999999999999888 5555554 99999988775 567778899999999999999988876 45 6777888
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC---CeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCE
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK---NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKY 251 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d---g~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~ 251 (945)
.+++.. .+. .+...+..++|+|+|++|++++.+ ..|++||+.+++.. .+.. +. .+.+++|+|+|++
T Consensus 299 ~~~~~~-~l~-------~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~-~~-~~~~~~~spdg~~ 367 (415)
T 2hqs_A 299 NGGAPQ-RIT-------WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSS-TF-LDETPSLAPNGTM 367 (415)
T ss_dssp TSSCCE-ECC-------CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCC-SS-SCEEEEECTTSSE
T ss_pred CCCCEE-EEe-------cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecC-CC-CcCCeEEcCCCCE
Confidence 876532 221 223467789999999999988764 58999999988764 4443 43 8999999999999
Q ss_pred EEEEECCC---eEEEEECCCCeeeeeccCCCCeeEEEEecCCC
Q 002266 252 MATSSLDR---QILIWDVGKKLDIDRQKFDDRICCMAWKPIGN 291 (945)
Q Consensus 252 Lasgs~Dg---~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~ 291 (945)
|++++.++ .|++||+..+.......+...|.+++|+|...
T Consensus 368 l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCCC
T ss_pred EEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccccc
Confidence 99988777 89999998777666677888999999999643
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=5.3e-22 Score=236.50 Aligned_cols=285 Identities=10% Similarity=0.069 Sum_probs=222.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcC--CCCccccccccccccceEEEEEec----CCCEEEEEEc-CCcEEEEEcCC
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDP--LLPSNLPKILRHHRDGVTALALSP----NSTCLASGSI-DHSVKLYKFPG 92 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~--~~~~~~~~~l~~h~~~V~~la~sp----dg~~Lasgs~-Dg~V~iwdl~~ 92 (945)
+.+++|+|+|++|++++ .++.|.+||+ .+. .....+. +...+..++|+| ||++|++++. +++|.+||..+
T Consensus 181 ~~~v~~spdg~~l~v~~-~d~~V~v~D~~~~t~-~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIG-RDARIDMIDLWAKEP-TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEE-TTSEEEEEETTSSSC-EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEEC-CCCeEEEEECcCCCC-cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 88999999999999997 7799999999 554 3344444 345689999999 9999999884 89999999999
Q ss_pred CeeeeecccC-----------CCCEEEEEEecCCCEE-EEEECCCcEEEEEcCCCeEEE--EEecCCCCEEEEEEccCCC
Q 002266 93 GEFQTNITRF-----------TLPIRVLAFNKSGSML-AAAGDDEGIKLINTIDGSIAR--VLKGHKGPVTGLAFDPNSE 158 (945)
Q Consensus 93 g~~~~~l~~~-----------~~~V~~l~fspdg~~L-asgs~Dg~I~iwd~~~~~~~~--~l~~h~~~V~~lafspdg~ 158 (945)
++++..+..+ ...+..+.++|++..+ ++...++.|.+||+.+.+.+. .+ .+...+.+++|+|+|+
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHR 336 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSC
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCC
Confidence 9887776532 2268899999977654 555678999999998765433 33 3567788999999999
Q ss_pred EEEEEe-CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC-CCEEEEEe-CCCeEEEEECCC-------CcE
Q 002266 159 YLASID-SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD-GETLAVPG-LKNDVVMYDRDT-------AEK 228 (945)
Q Consensus 159 ~Las~s-~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd-g~~La~gs-~dg~I~vwD~~t-------~~~ 228 (945)
+|++++ .+++|.+||+.+++.+..+.... ..|......+ ++|+ |..++++. .++.|.+||+.+ ++.
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l~~~i~~g~---~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~ 412 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRLSALVDVGK---TPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK 412 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSS---SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred EEEEEecCCCeEEEEECCCCeEEEeeccCC---CCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeE
Confidence 876654 58899999999998887765311 1222222222 4776 56666664 579999999998 899
Q ss_pred EEeecCCCCCCeEEEEEcCCCCEEEEEE-------CCCeEEEEECCCCeee-eec---------cCCCCeeEEEEecCCC
Q 002266 229 LFSLRGDHVQPICFLSWSPNGKYMATSS-------LDRQILIWDVGKKLDI-DRQ---------KFDDRICCMAWKPIGN 291 (945)
Q Consensus 229 ~~~~~~~h~~~I~~l~fSpdg~~Lasgs-------~Dg~I~IWD~~~~~~i-~~~---------~~~~~V~~la~spdg~ 291 (945)
+.++.. |...+..++|+|+|++|++++ .+++|.|||+.+++.. ..+ .+...+..+.|+|+|+
T Consensus 413 v~~l~~-~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 413 VAELQG-QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp EEEEEC-SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred EEEEEc-CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 999987 777888899999999999987 2679999999988766 332 3467899999999999
Q ss_pred EEEEEE-----cCCeEEEEecCCCCCC
Q 002266 292 ALAVID-----VMGKYGVWESVVPSSM 313 (945)
Q Consensus 292 ~Las~s-----~DG~I~iWd~~~~~~~ 313 (945)
.|+++. .++.|.|||..+....
T Consensus 492 ~~~~s~~~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 492 EVWFSVWNGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred EEEEEeecCCCCCCeEEEEECCCceEE
Confidence 888763 3799999999877653
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=9.1e-22 Score=217.39 Aligned_cols=275 Identities=12% Similarity=0.142 Sum_probs=197.4
Q ss_pred CCCEEEEEEcCCCeEEEEcCCCCcc-ccccccccccceEEEEEecCCCEEEEEEcC-CcEEEEEcC--CCee--eeeccc
Q 002266 28 QAHHLVTASSSETTISIHDPLLPSN-LPKILRHHRDGVTALALSPNSTCLASGSID-HSVKLYKFP--GGEF--QTNITR 101 (945)
Q Consensus 28 dg~~L~t~g~~dg~V~IWd~~~~~~-~~~~l~~h~~~V~~la~spdg~~Lasgs~D-g~V~iwdl~--~g~~--~~~l~~ 101 (945)
.+++++++++.++.|++|++..... .......|...+.+++|+|+|++|++++.+ +.|.+|++. ++.. ...+..
T Consensus 3 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 3 LKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp CEEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred ceEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 3456677756899999999853221 122223467789999999999999998876 999999997 5543 233333
Q ss_pred CCCCEEEEEEecCCCEEEEEEC-CCcEEEEEcCC---CeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEEccC
Q 002266 102 FTLPIRVLAFNKSGSMLAAAGD-DEGIKLINTID---GSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYWELQS 176 (945)
Q Consensus 102 ~~~~V~~l~fspdg~~Lasgs~-Dg~I~iwd~~~---~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwDl~t 176 (945)
. ..+..++|+|++++|++++. ++.|.+||+.+ ......+.. ...+.+++|+|++++|++++ .++.|.+||+.+
T Consensus 83 ~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 83 P-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp S-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 3 37889999999998877775 78899999943 334444443 35688999999999888877 889999999987
Q ss_pred -Ceeeeee--cccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCC--CcE--EEee---cCCC--CCCeEEE
Q 002266 177 -GRELHNL--KRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDT--AEK--LFSL---RGDH--VQPICFL 243 (945)
Q Consensus 177 -~~~i~~~--~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t--~~~--~~~~---~~~h--~~~I~~l 243 (945)
++..... .... .....+..++|+|+|+++++++ .++.|.+|++.. ++. ...+ ...+ ...+..+
T Consensus 161 ~~~~~~~~~~~~~~----~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 161 DGHLVAQDPAEVTT----VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp TSCEEEEEEEEEEC----STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred CCceeeeccccccc----CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 5433211 1110 1124567899999999776655 789999999953 332 2222 2111 2356789
Q ss_pred EEcCCCCEEEEEE-CCCeEEEEECC--C--CeeeeeccCCCCeeEEEEecCCCEEEEEE-cCCeEEEEecC
Q 002266 244 SWSPNGKYMATSS-LDRQILIWDVG--K--KLDIDRQKFDDRICCMAWKPIGNALAVID-VMGKYGVWESV 308 (945)
Q Consensus 244 ~fSpdg~~Lasgs-~Dg~I~IWD~~--~--~~~i~~~~~~~~V~~la~spdg~~Las~s-~DG~I~iWd~~ 308 (945)
+|+|+|++|+++. .++.|.+||+. + .+.+........+.+++|+|+|++|++++ .++.|.+|++.
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9999999887554 78999999998 3 33444444444589999999999888887 68999999664
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=1.9e-22 Score=248.91 Aligned_cols=284 Identities=9% Similarity=0.024 Sum_probs=214.7
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCC-----eEEEEcCCCCccccccccccc------------------------cceEEE
Q 002266 17 AASFCSILWDQQAHHLVTASSSET-----TISIHDPLLPSNLPKILRHHR------------------------DGVTAL 67 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg-----~V~IWd~~~~~~~~~~l~~h~------------------------~~V~~l 67 (945)
...|.+++|||||++|++++..++ .|++||+.++. ....+..+. ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ-TRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC-EEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc-eeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 356999999999999999974377 99999988763 333333332 237899
Q ss_pred EEecCCCEEEEEEcCCcEEEEEcCCCe--eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCC
Q 002266 68 ALSPNSTCLASGSIDHSVKLYKFPGGE--FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145 (945)
Q Consensus 68 a~spdg~~Lasgs~Dg~V~iwdl~~g~--~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~ 145 (945)
+|+|||++|++++. +.|++|++.++. ....+..+...+..++|+|||++|++++. +.|++||+.++........+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence 99999999999886 899999998872 34556677788999999999999999874 589999999887665544443
Q ss_pred CC----------------EEEEEEccCCCEEEEEeCCC---------------------------------cEEEEEccC
Q 002266 146 GP----------------VTGLAFDPNSEYLASIDSIG---------------------------------TVIYWELQS 176 (945)
Q Consensus 146 ~~----------------V~~lafspdg~~Las~s~Dg---------------------------------~I~iwDl~t 176 (945)
.. +.+++|+|||++|++++.|+ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 47899999999999987765 788999987
Q ss_pred -CeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC-----CCeEEEEECCCCcEEEeecCCCCC---CeEEEEEcC
Q 002266 177 -GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL-----KNDVVMYDRDTAEKLFSLRGDHVQ---PICFLSWSP 247 (945)
Q Consensus 177 -~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~-----dg~I~vwD~~t~~~~~~~~~~h~~---~I~~l~fSp 247 (945)
++....... ..+...+..++| |||++|++++. +..|++||+.+++....+...... .+..++|+|
T Consensus 273 ~~~~~~~~~~-----~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 273 QAQTQWIDLG-----KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp TCCCEEECCC-----SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred CCceEEecCC-----CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 764332211 123456788999 99999998754 567999999998876655431222 456889999
Q ss_pred CCCEEEEEECCCeEEEEECC-CCeeeeeccCCCCeeEE-EEecCCCEEEEEE-cCC--eEEEEecCC
Q 002266 248 NGKYMATSSLDRQILIWDVG-KKLDIDRQKFDDRICCM-AWKPIGNALAVID-VMG--KYGVWESVV 309 (945)
Q Consensus 248 dg~~Lasgs~Dg~I~IWD~~-~~~~i~~~~~~~~V~~l-a~spdg~~Las~s-~DG--~I~iWd~~~ 309 (945)
+|+++++++.||.+.||.+. .+.......+...|..+ .|+|+++.|++.+ .++ .++||++..
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 99999999999977777664 23333334556678787 5999999876554 444 899998864
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=2.1e-21 Score=231.42 Aligned_cols=275 Identities=12% Similarity=0.096 Sum_probs=216.5
Q ss_pred ECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEc--CCCeeeeecccC
Q 002266 25 WDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF--PGGEFQTNITRF 102 (945)
Q Consensus 25 fspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl--~~g~~~~~l~~~ 102 (945)
|+|++..+++. +.+++|.+||..++. +...+..+.. +.+++|+|||++|++++.|+.|.+||+ .+++.+..+. +
T Consensus 145 ~~p~~~~~vs~-~~d~~V~v~D~~t~~-~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~ 220 (543)
T 1nir_A 145 LDLPNLFSVTL-RDAGQIALVDGDSKK-IVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-I 220 (543)
T ss_dssp CCGGGEEEEEE-GGGTEEEEEETTTCC-EEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-C
T ss_pred cCCCCEEEEEE-cCCCeEEEEECCCce-EEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-c
Confidence 88988766665 589999999988764 4455553222 889999999999999999999999999 7888887776 4
Q ss_pred CCCEEEEEEec----CCCEEEEEEC-CCcEEEEEcCCCeEEEEEec----------CC-CCEEEEEEccCCCE-EEEEeC
Q 002266 103 TLPIRVLAFNK----SGSMLAAAGD-DEGIKLINTIDGSIARVLKG----------HK-GPVTGLAFDPNSEY-LASIDS 165 (945)
Q Consensus 103 ~~~V~~l~fsp----dg~~Lasgs~-Dg~I~iwd~~~~~~~~~l~~----------h~-~~V~~lafspdg~~-Las~s~ 165 (945)
...++.++|+| +|+++++++. ++.|.+||..+++++..+.. |. ..+.++.++|++.. +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 55689999999 9999999884 89999999999998888764 22 37899999997764 566677
Q ss_pred CCcEEEEEccCCeeee--eecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecC---CCCCC
Q 002266 166 IGTVIYWELQSGRELH--NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRG---DHVQP 239 (945)
Q Consensus 166 Dg~I~iwDl~t~~~i~--~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~---~h~~~ 239 (945)
++.|.+||+.+.+.+. .+. ....+..++|+|+|++|++++ .++.|.+||..+++.+..+.. .|.+.
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~--------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG--------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE--------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred CCeEEEEEecCCCcceeEEec--------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 8999999998865443 221 123456799999999877665 588999999999998877763 24443
Q ss_pred eEEEEEcCC-CCEEEEEE-CCCeEEEEECCC-------Ceeeeecc-CCCCeeEEEEecCCCEEEEEE-------cCCeE
Q 002266 240 ICFLSWSPN-GKYMATSS-LDRQILIWDVGK-------KLDIDRQK-FDDRICCMAWKPIGNALAVID-------VMGKY 302 (945)
Q Consensus 240 I~~l~fSpd-g~~Lasgs-~Dg~I~IWD~~~-------~~~i~~~~-~~~~V~~la~spdg~~Las~s-------~DG~I 302 (945)
...+ ++|+ |.+++++. .|++|.|||+.+ .+++..+. +...+..++++|+++.|++++ .+++|
T Consensus 373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v 451 (543)
T 1nir_A 373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSV 451 (543)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCE
T ss_pred Cccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceE
Confidence 3333 4776 66677765 589999999988 77777754 556788999999999999987 37799
Q ss_pred EEEecCCCCC
Q 002266 303 GVWESVVPSS 312 (945)
Q Consensus 303 ~iWd~~~~~~ 312 (945)
.+||+.....
T Consensus 452 ~v~d~~~~~~ 461 (543)
T 1nir_A 452 AVFDLKNLDA 461 (543)
T ss_dssp EEEETTCTTS
T ss_pred EEEECCCCCC
Confidence 9999987654
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=1.4e-22 Score=249.27 Aligned_cols=287 Identities=10% Similarity=0.054 Sum_probs=208.2
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccccccc---ceEEEEEecCCCEEEEEEcC---------CcE
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRD---GVTALALSPNSTCLASGSID---------HSV 85 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~---~V~~la~spdg~~Lasgs~D---------g~V 85 (945)
..+.+++|+|||+++++ + .||.|++||+.++. ....+..|.. .|.+++|+|||++|++++.+ +.|
T Consensus 17 ~~~~~~~~spdg~~~~~-~-~dg~i~~~d~~~g~-~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-E-QKGTVRLWNVETNT-STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-C-SSSCEEEBCGGGCC-CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEEE-e-CCCCEEEEECCCCc-EEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 34678899999997765 4 79999999987763 3445555554 49999999999999998764 788
Q ss_pred EEEEcCCCeeeeecc---cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCE--------------
Q 002266 86 KLYKFPGGEFQTNIT---RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV-------------- 148 (945)
Q Consensus 86 ~iwdl~~g~~~~~l~---~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V-------------- 148 (945)
++||+.+++. ..+. .+...+..++|+|||+.|+.++. +.|++||+.++........+...+
T Consensus 94 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 94 VLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 8999998875 3333 23344889999999999999986 789999999887766655444333
Q ss_pred ----EEEEEccCCCEEEEEeCCC----------------------------------cEEEEEccCCeeeeeecccCCCC
Q 002266 149 ----TGLAFDPNSEYLASIDSIG----------------------------------TVIYWELQSGRELHNLKRVAPDI 190 (945)
Q Consensus 149 ----~~lafspdg~~Las~s~Dg----------------------------------~I~iwDl~t~~~i~~~~~~~~~~ 190 (945)
.+++|+|||++|++++.++ .|++||+.+++....+.... ..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~-~~ 250 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD-DP 250 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC-CG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc-cC
Confidence 7899999999999887553 78999998876544443210 11
Q ss_pred CCCCCCceEEEEcCCCCEEEEEeC----CCeEEEEECCCCcEEEeecCCCCCCe----EEEEEcCCCCEEEE--EECCC-
Q 002266 191 GSDPSSMNVLSWSPDGETLAVPGL----KNDVVMYDRDTAEKLFSLRGDHVQPI----CFLSWSPNGKYMAT--SSLDR- 259 (945)
Q Consensus 191 ~~~~~~i~~l~~spdg~~La~gs~----dg~I~vwD~~t~~~~~~~~~~h~~~I----~~l~fSpdg~~Las--gs~Dg- 259 (945)
..+...+..++|+|||++|++... +..|++||+.+++....+...+...+ ..++|+|+|++|+. +..++
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence 112456788999999998877643 35799999999887655433233333 37899999997775 44566
Q ss_pred -----eEEEEE-CCCCe---eeeeccCCCCeeE-EEEecCCCEEEEEEcC---CeEEEEecCCC
Q 002266 260 -----QILIWD-VGKKL---DIDRQKFDDRICC-MAWKPIGNALAVIDVM---GKYGVWESVVP 310 (945)
Q Consensus 260 -----~I~IWD-~~~~~---~i~~~~~~~~V~~-la~spdg~~Las~s~D---G~I~iWd~~~~ 310 (945)
.|++|| ..++. ..........+.. ++|+|+|+.|++.+.+ +.+.+|++...
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 577777 44544 2222223344554 6999999999877665 78999998654
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=2.5e-21 Score=237.58 Aligned_cols=282 Identities=14% Similarity=0.075 Sum_probs=212.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC-----
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG----- 92 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~----- 92 (945)
..|.+++|||| +.++++. ++.|++||+.++. ...+..+...+.+++|+|||++|+++ .++.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARK--VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTE--EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCc--eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccC
Confidence 56999999999 7777765 5999999987653 23344566778999999999999985 679999999988
Q ss_pred CeeeeecccCCCC--------------EEEEEEecCCCEEEEEE---------------------------------CCC
Q 002266 93 GEFQTNITRFTLP--------------IRVLAFNKSGSMLAAAG---------------------------------DDE 125 (945)
Q Consensus 93 g~~~~~l~~~~~~--------------V~~l~fspdg~~Lasgs---------------------------------~Dg 125 (945)
++........... +.++.|+|||++|++++ .+.
T Consensus 156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 7765444333332 47899999999999997 346
Q ss_pred cEEEEEcCCCeEEEEEe--cCCCCEEEEEEccCCCEEEEEeCCC-----cEEEEEccCCeeeeeecccCCCCCCCCCCce
Q 002266 126 GIKLINTIDGSIARVLK--GHKGPVTGLAFDPNSEYLASIDSIG-----TVIYWELQSGRELHNLKRVAPDIGSDPSSMN 198 (945)
Q Consensus 126 ~I~iwd~~~~~~~~~l~--~h~~~V~~lafspdg~~Las~s~Dg-----~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~ 198 (945)
.|++||+.+++...... .|...+.+++|+|+|++|++++.++ .|++||+.+++....+..... ......+.
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~--~~~~~~~~ 313 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD--KHYVEPLH 313 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC--SSCCCCCS
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC--CCeECccC
Confidence 79999999887654432 4667899999999999999887775 899999999843333321110 01111235
Q ss_pred EEEEcC--CCCEEEEEeCCCeEEEEECC-CCcEEEeecCCCCCCeEE-EEEcCCCCEEEEEECC-C----eEEEEECCCC
Q 002266 199 VLSWSP--DGETLAVPGLKNDVVMYDRD-TAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLD-R----QILIWDVGKK 269 (945)
Q Consensus 199 ~l~~sp--dg~~La~gs~dg~I~vwD~~-t~~~~~~~~~~h~~~I~~-l~fSpdg~~Lasgs~D-g----~I~IWD~~~~ 269 (945)
.++|+| +|++++++..++.+++|.+. ++..+..+.. +...+.. ++|+|+|+.|+.++.+ + .|+.||+.++
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 689999 99999999889988888876 5666666665 6677876 7999999988766554 3 6777888776
Q ss_pred eeeeeccCCCCeeEEEEecCCCEEEEEEcC----CeEEEEecCC
Q 002266 270 LDIDRQKFDDRICCMAWKPIGNALAVIDVM----GKYGVWESVV 309 (945)
Q Consensus 270 ~~i~~~~~~~~V~~la~spdg~~Las~s~D----G~I~iWd~~~ 309 (945)
. .....+...+.+++|+|+|++|++...+ +.|++|+...
T Consensus 393 ~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 393 K-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp C-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred C-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 5 3344466779999999999988876444 5699999754
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.1e-21 Score=210.94 Aligned_cols=251 Identities=14% Similarity=0.143 Sum_probs=192.0
Q ss_pred cCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC-CeeeeecccC-CCCEEEEEEecC
Q 002266 37 SSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG-GEFQTNITRF-TLPIRVLAFNKS 114 (945)
Q Consensus 37 ~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~-g~~~~~l~~~-~~~V~~l~fspd 114 (945)
+.++.|++||+.++. ...+..|...|.+++|+|+|++|++++ ++.|++|++.+ ++.......+ ...+.+++|+|+
T Consensus 19 ~~~~~i~~~d~~~~~--~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRK--MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCEEEEEEETTTTE--EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CcceeEEEEeCCCCc--eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 478999999987753 335566889999999999999999976 78999999998 7766655544 367889999999
Q ss_pred CCEEEEEEC--CCcEE--EEEcCCCeEEEEEecCCCCEEEEEEccCCCEEE-EEeCCCcEEEEEccCC-eeeeeecccCC
Q 002266 115 GSMLAAAGD--DEGIK--LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLA-SIDSIGTVIYWELQSG-RELHNLKRVAP 188 (945)
Q Consensus 115 g~~Lasgs~--Dg~I~--iwd~~~~~~~~~l~~h~~~V~~lafspdg~~La-s~s~Dg~I~iwDl~t~-~~i~~~~~~~~ 188 (945)
+++|++++. ++.+. +|++.++. ...+..+ ..+..++|+|++++|+ +++.++.+.+|++... .....+.
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~---- 169 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT---- 169 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC----
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc----
Confidence 999999983 34444 45555554 3444433 4589999999999877 6778999999986532 2222221
Q ss_pred CCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECC-CCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECC--------
Q 002266 189 DIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRD-TAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD-------- 258 (945)
Q Consensus 189 ~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~-t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D-------- 258 (945)
.+...+.+++|+|+|++|++++ .++.+.+|++. .+..+..+.. +...+..++|+|+|++|++++.+
T Consensus 170 ---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 170 ---HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp ---CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred ---cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 2345678999999999888776 48889999876 4555566654 66789999999999999988765
Q ss_pred ---CeEEEEECCCCeeeee---ccCCCCeeEEEEecCCCEEEEEEcCC
Q 002266 259 ---RQILIWDVGKKLDIDR---QKFDDRICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 259 ---g~I~IWD~~~~~~i~~---~~~~~~V~~la~spdg~~Las~s~DG 300 (945)
+.|++||+.+++.... ..+...+.+++|+|+++.|++++.+.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988765433 35677899999999999998887654
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=3e-21 Score=212.64 Aligned_cols=268 Identities=11% Similarity=0.057 Sum_probs=205.9
Q ss_pred CEEEEEEcCCCeEEEEcCCCCcccccccc-cccc-ceEEEEEecCCCEEEE-EEcCCcEEEEEcCCCeeeeecccC----
Q 002266 30 HHLVTASSSETTISIHDPLLPSNLPKILR-HHRD-GVTALALSPNSTCLAS-GSIDHSVKLYKFPGGEFQTNITRF---- 102 (945)
Q Consensus 30 ~~L~t~g~~dg~V~IWd~~~~~~~~~~l~-~h~~-~V~~la~spdg~~Las-gs~Dg~V~iwdl~~g~~~~~l~~~---- 102 (945)
++|++++ .++.|.+||..++.. ...+. ++.. .+.+++|+|+|+++++ +..++.|.+||+.+++....+...
T Consensus 2 ~~~v~~~-~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPA-RPDKLVVIDTEKMAV-DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEE-TTTEEEEEETTTTEE-EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcC-CCCeEEEEECCCCcE-EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 3566665 899999999887643 33333 2222 4789999999987654 455789999999998877655421
Q ss_pred -CCCEEEEEEecCCCEEEEEE------------CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 002266 103 -TLPIRVLAFNKSGSMLAAAG------------DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTV 169 (945)
Q Consensus 103 -~~~V~~l~fspdg~~Lasgs------------~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I 169 (945)
...+..++|+|+|++|++++ .++.|.+||+.+++....+.. ...+.+++|+|++++|+++ ++.|
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 12567899999999999886 579999999999888777764 4567889999999988887 6899
Q ss_pred EEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC------------------------eEEEEECCC
Q 002266 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN------------------------DVVMYDRDT 225 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg------------------------~I~vwD~~t 225 (945)
.+||+.+++....+..... ... +.|+|+|+.+++.+..+ .|.+||..+
T Consensus 157 ~~~d~~~~~~~~~~~~~~~-----~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 228 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSW-----EAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET 228 (337)
T ss_dssp EEEETTTTEEEEEECSTTT-----TTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT
T ss_pred EEEECCCCcEeeeeecccc-----CCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC
Confidence 9999999987766543210 111 37889888776554332 478999998
Q ss_pred CcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEE
Q 002266 226 AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVW 305 (945)
Q Consensus 226 ~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iW 305 (945)
++....-...+...+..++|+|+|++|+++ ++.|.+||+.+++.+........+.+++|+|+|++|++++.++.|.+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 229 GEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred CCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 876522112255678899999999999988 799999999999888877666788999999999999999999999999
Q ss_pred ecCCCCC
Q 002266 306 ESVVPSS 312 (945)
Q Consensus 306 d~~~~~~ 312 (945)
|+.....
T Consensus 307 d~~~~~~ 313 (337)
T 1pby_B 307 DAETLEK 313 (337)
T ss_dssp ETTTCCE
T ss_pred ECcCCcE
Confidence 9876654
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=1.7e-20 Score=207.12 Aligned_cols=272 Identities=13% Similarity=0.122 Sum_probs=192.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCC--CCcc-ccccccccccceEEEEEecCCCEEEEEEc-CCcEEEEEc
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPL--LPSN-LPKILRHHRDGVTALALSPNSTCLASGSI-DHSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~--~~~~-~~~~l~~h~~~V~~la~spdg~~Lasgs~-Dg~V~iwdl 90 (945)
.|...+.+++|+|+|++|++++..++.|.+|++. ++.. ....+..+ ..+.+++|+|+|++|++++. ++.|.+|++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 4556788999999999999988555999999986 3321 12223333 37889999999998877765 788999999
Q ss_pred CC---CeeeeecccCCCCEEEEEEecCCCEEEEEE-CCCcEEEEEcCC-CeEEE----EEec-CCCCEEEEEEccCCCEE
Q 002266 91 PG---GEFQTNITRFTLPIRVLAFNKSGSMLAAAG-DDEGIKLINTID-GSIAR----VLKG-HKGPVTGLAFDPNSEYL 160 (945)
Q Consensus 91 ~~---g~~~~~l~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~iwd~~~-~~~~~----~l~~-h~~~V~~lafspdg~~L 160 (945)
.+ +.....+. ....+.+++|+|+|+++++++ .++.|.+||+.+ +.... .+.. ....+.+++|+|++++|
T Consensus 114 ~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 43 33333333 334688999999999988888 889999999987 65432 2232 34578899999999977
Q ss_pred EEEe-CCCcEEEEEccC--Cee--eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECC--C--CcEEE
Q 002266 161 ASID-SIGTVIYWELQS--GRE--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRD--T--AEKLF 230 (945)
Q Consensus 161 as~s-~Dg~I~iwDl~t--~~~--i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~--t--~~~~~ 230 (945)
++++ .++.|.+|++.. +.. ...+... +........+..++|+|+|++|+++. .++.|.+||+. + .+.+.
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMM-PENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECS-CTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeecccc-CccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 6554 789999999954 332 2222211 11111123566899999999887554 68999999998 2 34444
Q ss_pred eecCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEC--CCCee--eeeccCCCCeeEEEEecCCC
Q 002266 231 SLRGDHVQPICFLSWSPNGKYMATSS-LDRQILIWDV--GKKLD--IDRQKFDDRICCMAWKPIGN 291 (945)
Q Consensus 231 ~~~~~h~~~I~~l~fSpdg~~Lasgs-~Dg~I~IWD~--~~~~~--i~~~~~~~~V~~la~spdg~ 291 (945)
.+.. + ..+..++|+|+|++|++++ .++.|.||++ .++.. +..........+++|.++.+
T Consensus 272 ~~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 272 FQPT-E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEC-S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred eecC-C-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 4543 3 3388999999999988887 5899999954 46543 33344446678888888654
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=1.3e-20 Score=232.37 Aligned_cols=280 Identities=12% Similarity=0.052 Sum_probs=209.6
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc-cccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPS-NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~-~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
.|.+++|||||++|++++ ++.|++||+.++. .....+..|...+.+++|+|||++|++++ ++.|++|++.+++...
T Consensus 110 ~v~~~~~SpDg~~l~~~~--~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPL--GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEE--TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcceeEECCCCCEEEEEe--CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 378899999999999987 3899999987651 03445667788899999999999999987 4689999999887665
Q ss_pred ecccCCCC----------------EEEEEEecCCCEEEEEECCC---------------------------------cEE
Q 002266 98 NITRFTLP----------------IRVLAFNKSGSMLAAAGDDE---------------------------------GIK 128 (945)
Q Consensus 98 ~l~~~~~~----------------V~~l~fspdg~~Lasgs~Dg---------------------------------~I~ 128 (945)
....+... +..++|+|||++|++++.|+ .|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 44433332 47799999999999998765 788
Q ss_pred EEEcCC-CeEEEEEe--cCCCCEEEEEEccCCCEEEEEeC-----CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEE
Q 002266 129 LINTID-GSIARVLK--GHKGPVTGLAFDPNSEYLASIDS-----IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200 (945)
Q Consensus 129 iwd~~~-~~~~~~l~--~h~~~V~~lafspdg~~Las~s~-----Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l 200 (945)
+||+.+ ++...... .|...+.+++| |+|++|++++. +..|++||+.+++....+...... ....+..+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~---~~~~~~~~ 342 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT---WVPLHNSL 342 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS---CCCCCSCC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC---cCCcCCce
Confidence 999988 77554433 37778999999 99999987754 567999999998766555432110 00134568
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECC-CCcEEEeecCCCCCCeEEE-EEcCCCCEEEEEE-CCC--eEEEEECCC-Ceeeee
Q 002266 201 SWSPDGETLAVPGLKNDVVMYDRD-TAEKLFSLRGDHVQPICFL-SWSPNGKYMATSS-LDR--QILIWDVGK-KLDIDR 274 (945)
Q Consensus 201 ~~spdg~~La~gs~dg~I~vwD~~-t~~~~~~~~~~h~~~I~~l-~fSpdg~~Lasgs-~Dg--~I~IWD~~~-~~~i~~ 274 (945)
+|+|+|+++++++.++.+.||.+. .+. ...+.. +...+..+ .|+|+|+.|+..+ .++ .++||++.. +.....
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~-~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~ 420 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH-GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQR 420 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC-SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEE
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee-cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeee
Confidence 999999988888888877777665 344 566655 66778887 5999999876554 454 899998864 443444
Q ss_pred ccCCCCeeEEEEecCCCEEEEEEcC----CeEEEEec
Q 002266 275 QKFDDRICCMAWKPIGNALAVIDVM----GKYGVWES 307 (945)
Q Consensus 275 ~~~~~~V~~la~spdg~~Las~s~D----G~I~iWd~ 307 (945)
......+.+++|+|+|+.|++...+ +.+.+|+.
T Consensus 421 l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 421 LSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp CCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred cccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 4446678999999999988776443 45777765
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=1.7e-20 Score=240.88 Aligned_cols=277 Identities=9% Similarity=0.040 Sum_probs=222.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
+|...|.+++|+++ .++.++..++.+.||.+.........+..|. .+..++|+|||++|+++ .++.|++|++....
T Consensus 201 ~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~ 276 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK 276 (1045)
T ss_dssp CCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred CCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceE
Confidence 56788999999988 4555555788899997654333444555554 46778999999999887 48999999985444
Q ss_pred eeeeccc-----------CCCCEEEEEEe-cCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCC-CEEEEEEccCCCEEE
Q 002266 95 FQTNITR-----------FTLPIRVLAFN-KSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKG-PVTGLAFDPNSEYLA 161 (945)
Q Consensus 95 ~~~~l~~-----------~~~~V~~l~fs-pdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~-~V~~lafspdg~~La 161 (945)
.. .+.. +...+.+++|+ |+|++|++++ ++.|++|++..+... .+..|.. .+.+++|+ +|+.|+
T Consensus 277 l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~ 352 (1045)
T 1k32_A 277 IE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFI 352 (1045)
T ss_dssp EE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEE
T ss_pred ee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEE
Confidence 33 4433 23368899999 9999999988 789999999877644 4666777 89999999 999999
Q ss_pred EEeCCCcEE-EEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCe
Q 002266 162 SIDSIGTVI-YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPI 240 (945)
Q Consensus 162 s~s~Dg~I~-iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I 240 (945)
+++.++.+. +||+.++.... +. .+...+..++|+|+|++|++++.++.|++||+.+++....+.. |...+
T Consensus 353 ~~s~~~~l~~~~d~~~~~~~~-l~-------~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~-~~~~v 423 (1045)
T 1k32_A 353 HGTREGDFLGIYDYRTGKAEK-FE-------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS-REAMI 423 (1045)
T ss_dssp EEETTEEEEEEEETTTCCEEE-CC-------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCC
T ss_pred EEECCCceEEEEECCCCCceE-ec-------CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC-CCCCc
Confidence 998888888 89987765432 21 2346688999999999999999999999999999887766655 78889
Q ss_pred EEEEEcCCCCEEEEEECCC----------eEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 241 CFLSWSPNGKYMATSSLDR----------QILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 241 ~~l~fSpdg~~Lasgs~Dg----------~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
..++|||||++|++++.++ .|++||+.+++......+...+.+++|+|+|+.|++++.++...+|+..
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 9999999999999887654 8999999998866666777788999999999999999999988899865
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=1.6e-19 Score=199.26 Aligned_cols=263 Identities=11% Similarity=0.099 Sum_probs=189.2
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCC---cEEEEEcCCCe
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDH---SVKLYKFPGGE 94 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg---~V~iwdl~~g~ 94 (945)
..+ +++|+|+|++|++++..++.|.+||..++......+..+..++.+++|+|+|++|+++..++ .|.+||+.+++
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK 119 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC
Confidence 456 99999999998888766899999999876432455556666665599999999999555443 89999999998
Q ss_pred eeeecccCCCCEEEEEEecCCCEEEEE-ECCCc-EEEEEcCCCeEE----EEEecCCCCEEEEEEccCCCEEEEEe-CCC
Q 002266 95 FQTNITRFTLPIRVLAFNKSGSMLAAA-GDDEG-IKLINTIDGSIA----RVLKGHKGPVTGLAFDPNSEYLASID-SIG 167 (945)
Q Consensus 95 ~~~~l~~~~~~V~~l~fspdg~~Lasg-s~Dg~-I~iwd~~~~~~~----~~l~~h~~~V~~lafspdg~~Las~s-~Dg 167 (945)
....+.. .....+++|+|+|++++++ ..++. |.+|++.....+ .........+.+++|+|+|++|++++ .++
T Consensus 120 ~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 120 FISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred eEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 8776654 4557999999999866555 55588 999998754322 12223456689999999999665554 688
Q ss_pred cEEEEEccCCee---eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcE--EEeecCC---CC-
Q 002266 168 TVIYWELQSGRE---LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEK--LFSLRGD---HV- 237 (945)
Q Consensus 168 ~I~iwDl~t~~~---i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~--~~~~~~~---h~- 237 (945)
.|.+||+.+++. +..+.. ...+..++|+|+|++|++++ .++.|.+||+.+++. +..+... +.
T Consensus 199 ~v~v~d~~~~~~~~~~~~~~~--------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T 3u4y_A 199 SIGILETQNPENITLLNAVGT--------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPR 270 (331)
T ss_dssp EEEEEECSSTTSCEEEEEEEC--------SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCG
T ss_pred eEEEEECCCCcccceeeeccC--------CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCC
Confidence 999999998877 555432 13456799999999877665 467899999998876 3333221 11
Q ss_pred --CCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCeeeeeccCCCCeeEEEEecCC
Q 002266 238 --QPICFLSWSPNGKYMATSSL-DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIG 290 (945)
Q Consensus 238 --~~I~~l~fSpdg~~Lasgs~-Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg 290 (945)
.....++|+|+|++|++++. ++.|.|||+..............-....++|++
T Consensus 271 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 271 PLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp GGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCBSCEEECCCC-
T ss_pred CcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceecccccCCeEEECCcc
Confidence 22356899999998876655 569999999887665544443333334445543
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=3.6e-20 Score=222.37 Aligned_cols=268 Identities=14% Similarity=0.121 Sum_probs=199.0
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccc-cceEEEEEecCCCEEEEEEc---CCcEEEEEcCC
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHR-DGVTALALSPNSTCLASGSI---DHSVKLYKFPG 92 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~-~~V~~la~spdg~~Lasgs~---Dg~V~iwdl~~ 92 (945)
..+|++++|+|||+.|++++..+|++.||++..+ . ...+..|. ..+.+++|+|| +++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-E-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-E-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC-C-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 3679999999999999998755999999997443 3 33444444 68999999999 77777765 45556655432
Q ss_pred ---CeeeeecccCCCCEEEEEEecCCCE-EEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCC--
Q 002266 93 ---GEFQTNITRFTLPIRVLAFNKSGSM-LAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI-- 166 (945)
Q Consensus 93 ---g~~~~~l~~~~~~V~~l~fspdg~~-Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~D-- 166 (945)
+... .+.... .+...+|+|+|+. +++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEET
T ss_pred cCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCC
Confidence 3322 333222 3457789998864 344445556669999988766555433 3 789999999999988777
Q ss_pred --CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC--eEEEEECCCCcEEEeecCCCCCCeEE
Q 002266 167 --GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN--DVVMYDRDTAEKLFSLRGDHVQPICF 242 (945)
Q Consensus 167 --g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg--~I~vwD~~t~~~~~~~~~~h~~~I~~ 242 (945)
+.|++||+.+++.. .+. .+...+..++|+|||+.|+++..++ .|++||+.+++.. .+.. +...+..
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~-------~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-~~~~~~~ 242 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFD-------SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL-PSKDFSS 242 (582)
T ss_dssp TEEEEEEEETTTCCCE-EEC-------CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC-SCSHHHH
T ss_pred CCeEEEEEcCCCCCce-Eee-------cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC-CCcChhh
Confidence 78999999887654 232 2345578899999999999888888 8999999988877 5544 6666666
Q ss_pred EE--------EcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCe---EEEEec
Q 002266 243 LS--------WSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGK---YGVWES 307 (945)
Q Consensus 243 l~--------fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~---I~iWd~ 307 (945)
++ |+|||.++++++.++.++||++ ++... .....+.+++|+ +++.+++++.+.. |.+|+.
T Consensus 243 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 243 YRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp HCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred hhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 66 9999998999999999999999 65554 334678899999 9988888877754 555543
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=9e-20 Score=234.23 Aligned_cols=276 Identities=9% Similarity=0.048 Sum_probs=219.7
Q ss_pred CCCEEEEEEC-CCCCEEEEEEcCCCeEEEEcCCCCcccccccccccc-ceEEEEEecCCCEEEEEEcCCcEE-EEEcCCC
Q 002266 17 AASFCSILWD-QQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRD-GVTALALSPNSTCLASGSIDHSVK-LYKFPGG 93 (945)
Q Consensus 17 ~~~V~svafs-pdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~-~V~~la~spdg~~Lasgs~Dg~V~-iwdl~~g 93 (945)
...|.+++|+ |+|++|++++ ++.|++|+...+. ...+..|.. .+.+++|+ ||+.|++++.++.+. +|++.++
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred ccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 3468899999 9999999886 7899999987653 233556666 89999999 999999999888888 9998877
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCC------
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIG------ 167 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg------ 167 (945)
+... +..+...+..++|+|+|++|++++.++.|++||+.+++....+..|...+.+++|+|+|++|++++.++
T Consensus 370 ~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 370 KAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred CceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 6544 446778899999999999999999999999999999988887778999999999999999998887654
Q ss_pred ----cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE---------------
Q 002266 168 ----TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK--------------- 228 (945)
Q Consensus 168 ----~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~--------------- 228 (945)
.|++||+.+++ ...+. .+...+..++|+|+|++|++++.++...+|+......
T Consensus 449 ~~~~~i~l~d~~~g~-~~~l~-------~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRK-IFAAT-------TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIP 520 (1045)
T ss_dssp CCEEEEEEEETTTTE-EEECS-------CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESST
T ss_pred CCCCeEEEEECCCCc-EEEee-------CCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCC
Confidence 89999999876 33332 2334567899999999999998877766665432211
Q ss_pred ----------------------------EEeecCCCCCCeEEEEEcCCCCEEEE-------------EECCCeEEEEECC
Q 002266 229 ----------------------------LFSLRGDHVQPICFLSWSPNGKYMAT-------------SSLDRQILIWDVG 267 (945)
Q Consensus 229 ----------------------------~~~~~~~h~~~I~~l~fSpdg~~Las-------------gs~Dg~I~IWD~~ 267 (945)
+..+.. +...+..++++|+|.++++ ......|++||+.
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~-~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~ 599 (1045)
T 1k32_A 521 GSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV-DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVK 599 (1045)
T ss_dssp TCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSC-CCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETT
T ss_pred CCCCccccCcCccccccccccccCHhHceEEcCC-CCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECC
Confidence 112222 5567889999999987875 1234578999998
Q ss_pred CCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCC
Q 002266 268 KKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPS 311 (945)
Q Consensus 268 ~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~ 311 (945)
+++..... ..+.+++|+|||+.|++++.+ .|++|++....
T Consensus 600 ~~~~~~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 600 TRKVTEVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp TCCEEEEE---EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred CCcEEEee---cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 88754433 568899999999999998766 79999997544
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=4.4e-20 Score=226.89 Aligned_cols=275 Identities=7% Similarity=-0.032 Sum_probs=194.4
Q ss_pred CEEEEEECCCCCEEEEEEcC--------CCeEEEEcCCCCcc-ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEE
Q 002266 19 SFCSILWDQQAHHLVTASSS--------ETTISIHDPLLPSN-LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~--------dg~V~IWd~~~~~~-~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd 89 (945)
.|.+++|||||++|++++.. ++.|++||+.++.. .......|...+..++|+|||++|++++. +.|++|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 48999999999999998621 37899999877642 11222345556889999999999999876 7999999
Q ss_pred cCCCeeeeecccCCCC------------------EEEEEEecCCCEEEEEECCC--------------------------
Q 002266 90 FPGGEFQTNITRFTLP------------------IRVLAFNKSGSMLAAAGDDE-------------------------- 125 (945)
Q Consensus 90 l~~g~~~~~l~~~~~~------------------V~~l~fspdg~~Lasgs~Dg-------------------------- 125 (945)
+.+++.......+... +.+++|+|||++|++++.++
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 9888766554443333 37899999999999987653
Q ss_pred --------cEEEEEcCCCeEEEEEecC------CCCEEEEEEccCCCEEEEEeC----CCcEEEEEccCCeeeeeecccC
Q 002266 126 --------GIKLINTIDGSIARVLKGH------KGPVTGLAFDPNSEYLASIDS----IGTVIYWELQSGRELHNLKRVA 187 (945)
Q Consensus 126 --------~I~iwd~~~~~~~~~l~~h------~~~V~~lafspdg~~Las~s~----Dg~I~iwDl~t~~~i~~~~~~~ 187 (945)
.|++||+.+++....+..+ ...+.+++|+|||++|++.+. +..|++||+.+++....+....
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 300 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES 300 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc
Confidence 7999999888765566544 567899999999998877653 3579999999887655443211
Q ss_pred CCCCCCCCCceEEEEcCCCCEEEEE--eCCC------eEEEEE-CCCCcE--EEeecCCCCCCeEE-EEEcCCCCEEEEE
Q 002266 188 PDIGSDPSSMNVLSWSPDGETLAVP--GLKN------DVVMYD-RDTAEK--LFSLRGDHVQPICF-LSWSPNGKYMATS 255 (945)
Q Consensus 188 ~~~~~~~~~i~~l~~spdg~~La~g--s~dg------~I~vwD-~~t~~~--~~~~~~~h~~~I~~-l~fSpdg~~Lasg 255 (945)
... .......++|+|+|+.|++. ..++ .|++|| ..++.. ...+.. +...+.. ++|+|+|++|+..
T Consensus 301 ~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~ 377 (723)
T 1xfd_A 301 EAW--LHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS-GDWDVTKILAYDEKGNKIYFL 377 (723)
T ss_dssp SSC--CCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC-SSSCEEEEEEEETTTTEEEEE
T ss_pred CCE--EeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec-CCeEEEeeeEEcCCCCEEEEE
Confidence 100 00001357999999977754 4566 577788 444431 444443 3344554 6999999999877
Q ss_pred ECC---CeEEEEECCCCe--eeeecc----CCCCeeEEEEecCCCEEEEEE
Q 002266 256 SLD---RQILIWDVGKKL--DIDRQK----FDDRICCMAWKPIGNALAVID 297 (945)
Q Consensus 256 s~D---g~I~IWD~~~~~--~i~~~~----~~~~V~~la~spdg~~Las~s 297 (945)
+.+ +.+.||++.... ...... +...+..++|+|+|++|+...
T Consensus 378 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 378 STEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp ESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred EcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 665 789999986432 222221 456789999999999887653
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=6.7e-20 Score=196.89 Aligned_cols=232 Identities=17% Similarity=0.232 Sum_probs=174.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCC-Ccccccccccc-ccceEEEEEecCCCEEEEEEc--CCcEEEE--
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLL-PSNLPKILRHH-RDGVTALALSPNSTCLASGSI--DHSVKLY-- 88 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~-~~~~~~~l~~h-~~~V~~la~spdg~~Lasgs~--Dg~V~iw-- 88 (945)
.|...|.+++|+|+|++|++++ ++.|++||+.+ + ........| ...+.+++|+|+|++|++++. ++.+.||
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDP-SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCC-SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred cCCcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCC-CceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 3557899999999999999875 78999999987 5 334444444 467899999999999999983 3445555
Q ss_pred EcCCCeeeeecccCCCCEEEEEEecCCCEEE-EEECCCcEEEEEcCC-CeEEEEEecCCCCEEEEEEccCCCEEEEEe-C
Q 002266 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLA-AAGDDEGIKLINTID-GSIARVLKGHKGPVTGLAFDPNSEYLASID-S 165 (945)
Q Consensus 89 dl~~g~~~~~l~~~~~~V~~l~fspdg~~La-sgs~Dg~I~iwd~~~-~~~~~~l~~h~~~V~~lafspdg~~Las~s-~ 165 (945)
+..++. ...+..+ ..+..++|+|++++|+ +++.++.+.||++.. +.....+..+...+.+++|+|++++|++++ .
T Consensus 116 ~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 193 (297)
T 2ojh_A 116 PSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSR 193 (297)
T ss_dssp ETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECT
T ss_pred ECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecC
Confidence 445554 3334333 3589999999999887 677889889988642 334456677888999999999999888766 5
Q ss_pred CCcEEEEEcc-CCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC-----------CeEEEEECCCCcE--EEe
Q 002266 166 IGTVIYWELQ-SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-----------NDVVMYDRDTAEK--LFS 231 (945)
Q Consensus 166 Dg~I~iwDl~-t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d-----------g~I~vwD~~t~~~--~~~ 231 (945)
++.+.+|++. .+.....+. .+...+..++|+|+|++|++++.+ +.|++||+.+++. +..
T Consensus 194 ~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 194 TGQMQIWRVRVDGSSVERIT-------DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp TSSCEEEEEETTSSCEEECC-------CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred CCCccEEEECCCCCCcEEEe-------cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 8999999987 344444332 233567889999999999988765 5699999988765 333
Q ss_pred ecCCCCCCeEEEEEcCCCCEEEEEECCC
Q 002266 232 LRGDHVQPICFLSWSPNGKYMATSSLDR 259 (945)
Q Consensus 232 ~~~~h~~~I~~l~fSpdg~~Lasgs~Dg 259 (945)
+.+ |...+..++|+|+|++|++++.+.
T Consensus 267 ~~~-~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LFG-GQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEE-STTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCC-CCcccccceECCCCCEEEEEEecc
Confidence 333 677899999999999998887653
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=9.1e-20 Score=202.01 Aligned_cols=282 Identities=11% Similarity=0.072 Sum_probs=194.5
Q ss_pred EEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccc-cceEEEEEecCCCEEEEE-EcCCcEEEEEcCCCeeeeec
Q 002266 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHR-DGVTALALSPNSTCLASG-SIDHSVKLYKFPGGEFQTNI 99 (945)
Q Consensus 22 svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~-~~V~~la~spdg~~Lasg-s~Dg~V~iwdl~~g~~~~~l 99 (945)
.+++++++.++++++ .++.|++||..++. ....+..+. ..+..++|+|+|++++++ ..++.|.+||+.+++....+
T Consensus 4 g~~~~~~~~~~v~~~-~~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN-YPNNLHVVDVASDT-VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEE-TTTEEEEEETTTTE-EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeC-CCCeEEEEECCCCc-EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 356788888777776 89999999988763 333443332 257899999999866544 46899999999998877665
Q ss_pred ccCC------CCEEEEEEecCCCEEEEEECC------------CcEEEEEcCCCe---EEEEEecCCCCEEEEEEccCCC
Q 002266 100 TRFT------LPIRVLAFNKSGSMLAAAGDD------------EGIKLINTIDGS---IARVLKGHKGPVTGLAFDPNSE 158 (945)
Q Consensus 100 ~~~~------~~V~~l~fspdg~~Lasgs~D------------g~I~iwd~~~~~---~~~~l~~h~~~V~~lafspdg~ 158 (945)
.... ..+..++|+|+|++|++++.+ +.|.+||+.+++ .+..+. +...+.+++|+|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS 160 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc
Confidence 5322 237789999999999999865 899999998743 333443 344688999999999
Q ss_pred EEEEEeCCCcEEEEEccCCeeeeeecccCCCCC-------------CCC-C---CceEEEEcCCCCEEEEEeCC-CeEEE
Q 002266 159 YLASIDSIGTVIYWELQSGRELHNLKRVAPDIG-------------SDP-S---SMNVLSWSPDGETLAVPGLK-NDVVM 220 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~-------------~~~-~---~i~~l~~spdg~~La~gs~d-g~I~v 220 (945)
+++++ +.|.+||+.+++.+..+........ ... . ....+++++++......... ..+..
T Consensus 161 -l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 161 -LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp -EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred -EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 66554 3499999999887766543210000 000 0 22346666554221111111 12223
Q ss_pred EECCCCcEE-EeecCCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEc
Q 002266 221 YDRDTAEKL-FSLRGDHVQPICFLSWSP-NGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDV 298 (945)
Q Consensus 221 wD~~t~~~~-~~~~~~h~~~I~~l~fSp-dg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~ 298 (945)
++..+++.. ..+. .+...+..++|+| +|++++++ ++.|.+||+.+++.+........+.+++|+|++++|++++.
T Consensus 238 ~~~~~~~~~~~~~~-~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 314 (349)
T 1jmx_B 238 VDLKTGKTHTQEFA-DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGT 314 (349)
T ss_dssp EETTTCCEEEEEEE-ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESB
T ss_pred EeccCCcEEecccc-cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecC
Confidence 555554422 1121 1456788999999 99999988 88999999999998877766677889999999998888888
Q ss_pred CCeEEEEecCCCCC
Q 002266 299 MGKYGVWESVVPSS 312 (945)
Q Consensus 299 DG~I~iWd~~~~~~ 312 (945)
++.|.+||......
T Consensus 315 ~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 315 FNDLAVFNPDTLEK 328 (349)
T ss_dssp SSEEEEEETTTTEE
T ss_pred CCeEEEEeccccce
Confidence 99999999876543
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=9.8e-19 Score=194.92 Aligned_cols=266 Identities=12% Similarity=0.106 Sum_probs=182.4
Q ss_pred CCCeEEEEcCCC--CccccccccccccceEEEEEecCCCEEEEEEc---CCcEEEEEcCCCee--eeecccCCCCEEEEE
Q 002266 38 SETTISIHDPLL--PSNLPKILRHHRDGVTALALSPNSTCLASGSI---DHSVKLYKFPGGEF--QTNITRFTLPIRVLA 110 (945)
Q Consensus 38 ~dg~V~IWd~~~--~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~---Dg~V~iwdl~~g~~--~~~l~~~~~~V~~l~ 110 (945)
.++.|.+|.+.. +.........+...+..++|+|+|+ |++++. ++.|++|++.++.. +..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 356677776543 3222222334557788899999999 555554 58999999977763 333344567788999
Q ss_pred EecCCCEEEEEE-CCCcEEEEEcCC-Ce--EEEEEec---------CCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc-C
Q 002266 111 FNKSGSMLAAAG-DDEGIKLINTID-GS--IARVLKG---------HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ-S 176 (945)
Q Consensus 111 fspdg~~Lasgs-~Dg~I~iwd~~~-~~--~~~~l~~---------h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~-t 176 (945)
|+|+|++|++++ .++.|.+|++.. +. .+..+.. +...+.+++|+|+|+++++...++.|.+|++. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999999888 678999999963 33 2233321 12348899999999966666678899999998 4
Q ss_pred CeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECCC--CcE--EEeecCCC-----CCCeEEEEEc
Q 002266 177 GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRDT--AEK--LFSLRGDH-----VQPICFLSWS 246 (945)
Q Consensus 177 ~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~t--~~~--~~~~~~~h-----~~~I~~l~fS 246 (945)
+......... . .....+..++|+|+|++++++ ..++.|.+|++.. ++. +..+.... ...+..++|+
T Consensus 173 g~~~~~~~~~-~---~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 173 GQLSEQSVLT-M---EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp SCEEEEEEEE-C---CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred CcEEEeeeEE-c---CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 4332211110 0 112346789999999977664 5678999999874 442 22222201 1358889999
Q ss_pred CCCCEEE-EEECCCeEEEEECCCC---eeeeecc-CCCCeeEEEEecCCCEEEEEEcC-CeEEEEecC
Q 002266 247 PNGKYMA-TSSLDRQILIWDVGKK---LDIDRQK-FDDRICCMAWKPIGNALAVIDVM-GKYGVWESV 308 (945)
Q Consensus 247 pdg~~La-sgs~Dg~I~IWD~~~~---~~i~~~~-~~~~V~~la~spdg~~Las~s~D-G~I~iWd~~ 308 (945)
|+|++|+ +...++.|.+|++... ..+.... +...+.+++|+|+|++|++++.+ +.|.+|++.
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 9999874 5566899999999732 3333332 34568999999999998888765 899999664
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=1.5e-18 Score=192.73 Aligned_cols=244 Identities=12% Similarity=0.055 Sum_probs=195.7
Q ss_pred cccceEEEEEecCCCEEEEEEc-------CCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEE-CCCcEEEEE
Q 002266 60 HRDGVTALALSPNSTCLASGSI-------DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAG-DDEGIKLIN 131 (945)
Q Consensus 60 h~~~V~~la~spdg~~Lasgs~-------Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~iwd 131 (945)
....+..++|+|++++|++++. ++.|.+||..+++....+.. ...+..++|+|+|+++++++ .++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3457889999999999888774 56899999999987776654 34577899999999666655 478999999
Q ss_pred cCCCeEEEEEecCCCC---------EEEEEEccCCCEEEEEe--CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEE
Q 002266 132 TIDGSIARVLKGHKGP---------VTGLAFDPNSEYLASID--SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVL 200 (945)
Q Consensus 132 ~~~~~~~~~l~~h~~~---------V~~lafspdg~~Las~s--~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l 200 (945)
+.+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++.+..+... ...+..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~~~~ 190 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-------GKMSTGL 190 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-------CTTCCCC
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-------CCccceE
Confidence 9999988887765432 78999999999887776 4788999999999887766421 2235678
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC---CCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCeeeeecc
Q 002266 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG---DHVQPICFLSWSPNGKYMATSSL-DRQILIWDVGKKLDIDRQK 276 (945)
Q Consensus 201 ~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~---~h~~~I~~l~fSpdg~~Lasgs~-Dg~I~IWD~~~~~~i~~~~ 276 (945)
+|+|+|++|++++.++.|.+||..+++.+..+.. .+...+..++|+|+|++|++++. ++.|.+||+.+++.+....
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 9999999999999999999999999988776653 24456888999999998777765 4999999999998887765
Q ss_pred CCCCeeEEEEecCCCEEEEEE-cCCeEEEEecCCCCC
Q 002266 277 FDDRICCMAWKPIGNALAVID-VMGKYGVWESVVPSS 312 (945)
Q Consensus 277 ~~~~V~~la~spdg~~Las~s-~DG~I~iWd~~~~~~ 312 (945)
.... .+++|+|+++.|++++ .++.|.+||......
T Consensus 271 ~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 271 APES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp CSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred cCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 5443 6799999999776666 689999999876543
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=2.9e-19 Score=219.28 Aligned_cols=276 Identities=14% Similarity=0.133 Sum_probs=195.3
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccc-----------------cceEEEEEecCCCEEEEEEcC
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHR-----------------DGVTALALSPNSTCLASGSID 82 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~-----------------~~V~~la~spdg~~Lasgs~D 82 (945)
+..+.|. |..+++++ .++ | +||+.++......+..|. ..|.+++|+|| ..++.+. +
T Consensus 28 ~~~~~w~--g~~~~~~~-~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~ 100 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIE-GDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-Q 100 (706)
T ss_dssp CTTCEEE--TTEEEEEE-TTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-T
T ss_pred CCCCcCc--CCeEEEEe-CCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-C
Confidence 4456788 66677665 566 8 999987743102333332 46999999999 6666654 5
Q ss_pred CcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCC-----CeEEEEEecCCCC----------
Q 002266 83 HSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID-----GSIARVLKGHKGP---------- 147 (945)
Q Consensus 83 g~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~-----~~~~~~l~~h~~~---------- 147 (945)
+.|++||+.+++... +..+...+.+++|+|||++|+++ .++.|++|++.+ ++.......+...
T Consensus 101 ~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 101 GGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 999999999887544 44456778899999999999995 679999999988 7665544433333
Q ss_pred ----EEEEEEccCCCEEEEEe---------------------------------CCCcEEEEEccCCeeeeeecccCCCC
Q 002266 148 ----VTGLAFDPNSEYLASID---------------------------------SIGTVIYWELQSGRELHNLKRVAPDI 190 (945)
Q Consensus 148 ----V~~lafspdg~~Las~s---------------------------------~Dg~I~iwDl~t~~~i~~~~~~~~~~ 190 (945)
+.+++|+|||++|++++ .+..|++||+.+++.......
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~----- 253 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG----- 253 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC-----
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC-----
Confidence 48899999999999987 346799999998875433211
Q ss_pred CCCCCCceEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEeec-CCCC---CCeEEEEEcC--CCCEEEEEECCC
Q 002266 191 GSDPSSMNVLSWSPDGETLAVPGLKN-----DVVMYDRDTAEKLFSLR-GDHV---QPICFLSWSP--NGKYMATSSLDR 259 (945)
Q Consensus 191 ~~~~~~i~~l~~spdg~~La~gs~dg-----~I~vwD~~t~~~~~~~~-~~h~---~~I~~l~fSp--dg~~Lasgs~Dg 259 (945)
..+...+..++|+|||++|++++.++ .|++||..+++....+. ..+. ..+..++|+| +|++|++++.||
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 12345688999999999999987765 89999999984333322 1122 2346789999 999999999999
Q ss_pred eEEEEECC-CCeeeee-ccCCCCeeE-EEEecCCCEEEEEEcC-C----eEEEEecCC
Q 002266 260 QILIWDVG-KKLDIDR-QKFDDRICC-MAWKPIGNALAVIDVM-G----KYGVWESVV 309 (945)
Q Consensus 260 ~I~IWD~~-~~~~i~~-~~~~~~V~~-la~spdg~~Las~s~D-G----~I~iWd~~~ 309 (945)
.++||.+. ++..+.. ..+...+.+ ++|+|+++.|++++.+ + .|..|+...
T Consensus 334 ~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 334 WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 99998875 4444433 445556776 8999999988776554 3 455565543
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=3.5e-19 Score=196.00 Aligned_cols=243 Identities=11% Similarity=0.039 Sum_probs=188.4
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccc-cc----ccceEEEEEecCCCEEEEEE------------c
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR-HH----RDGVTALALSPNSTCLASGS------------I 81 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~-~h----~~~V~~la~spdg~~Lasgs------------~ 81 (945)
.+.+++|+|+|+++++++..++.|.+||+.++.. ...+. .+ ...+.+++|+|+|++|++++ .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-EeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 4778999999998888776789999999877643 22222 21 23677899999999998886 5
Q ss_pred CCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEE
Q 002266 82 DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLA 161 (945)
Q Consensus 82 Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~La 161 (945)
++.|.+||+.+++....+.. ...+.+++|+|+|++|+++ ++.|.+||+.+++....+..+... ..+.|+|++.+|+
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~ 189 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVW 189 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCC
T ss_pred CceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEe
Confidence 79999999999887766654 4567889999999988888 688999999999887777654311 1237899998776
Q ss_pred EEeCCC------------------------cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCe
Q 002266 162 SIDSIG------------------------TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKND 217 (945)
Q Consensus 162 s~s~Dg------------------------~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~ 217 (945)
.++..+ .|.+||+.+++.. .+... .+...+..++|+|+|++++++ ++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~-----~~~~~~~~~~~s~dg~~l~~~--~~~ 261 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR-----IMDVFYFSTAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE-----ECSSCEEEEEECTTSSEEEEE--ESE
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC-----CCCCceeeEEECCCCCEEEEe--CCe
Confidence 554332 4689999988764 22211 123456789999999999988 789
Q ss_pred EEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc
Q 002266 218 VVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK 276 (945)
Q Consensus 218 I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~ 276 (945)
|++||+.+++.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.+++.+..+.
T Consensus 262 v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 262 LESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp EEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 99999999988777763 3467899999999999999889999999999988776643
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=2.8e-18 Score=198.67 Aligned_cols=291 Identities=13% Similarity=0.075 Sum_probs=197.5
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc----------c----ccccccccccceEEEEEecCCCEEE----
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPS----------N----LPKILRHHRDGVTALALSPNSTCLA---- 77 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~----------~----~~~~l~~h~~~V~~la~spdg~~La---- 77 (945)
....++.+++++++.++++++ .++ ++||+..... . .......|...|++++|+|+|++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~-~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGG-ASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEE-TTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEEC-CCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 345689999999999999886 666 8887632100 0 0001123456799999999999999
Q ss_pred EEEcCCcEEEEEcCCC--------e---eeeecccCCCCEEEEEEecC-CCEEEEEECCCcEEEEEcCCCeEEEEEecCC
Q 002266 78 SGSIDHSVKLYKFPGG--------E---FQTNITRFTLPIRVLAFNKS-GSMLAAAGDDEGIKLINTIDGSIARVLKGHK 145 (945)
Q Consensus 78 sgs~Dg~V~iwdl~~g--------~---~~~~l~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~ 145 (945)
+|+.|+.|+|||+.++ + ....+.+|...|.+++|+|+ +.+|++++.||.|++||++++.......+|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 7788999999998654 1 13455668899999999997 8999999999999999999987777777889
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCC------eE
Q 002266 146 GPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKN------DV 218 (945)
Q Consensus 146 ~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg------~I 218 (945)
..|.+++|+|+|++|++++.||.|++||++ +.....+..+......+...+.+++|++++.++++.+ .+| .+
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v 271 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCce
Confidence 999999999999999999999999999998 5554544432211112334788999999888775533 332 38
Q ss_pred EEEECCCCc-----EEEeecC------CCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCC------------eeeee
Q 002266 219 VMYDRDTAE-----KLFSLRG------DHVQPICFLSWSPNGKYMATSSL-DRQILIWDVGKK------------LDIDR 274 (945)
Q Consensus 219 ~vwD~~t~~-----~~~~~~~------~h~~~I~~l~fSpdg~~Lasgs~-Dg~I~IWD~~~~------------~~i~~ 274 (945)
++|++.... ....+.. ....+...+.+-++.+++++++. .+.|.|+..... .....
T Consensus 272 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~~~~~~~~~~~~d~~ra~l 351 (434)
T 2oit_A 272 VMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAEL 351 (434)
T ss_dssp EEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECTTSSCEEEEEECGGGCCBC
T ss_pred EEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecCCCCccEEEeccccccccc
Confidence 999987542 1122211 12223333444466676665543 444555543221 11100
Q ss_pred ----ccCCCCeeEEEEec---------------CCCEEEEEEcCCeEEEEecCC
Q 002266 275 ----QKFDDRICCMAWKP---------------IGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 275 ----~~~~~~V~~la~sp---------------dg~~Las~s~DG~I~iWd~~~ 309 (945)
......+.++++.- --..|.+-+.+|.|..|.+..
T Consensus 352 P~~~~~~dt~piG~~~d~~~~~~v~~~~~~~~~p~P~l~~l~~~G~L~~~~~~~ 405 (434)
T 2oit_A 352 PVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMIN 405 (434)
T ss_dssp CBCTTSCBCCEEEEEEECCCCCCEEEETTEEECCCCEEEEEETTSEEEEEEEEE
T ss_pred cCCCCCCCceeeEEEEEccCCceeecCccccCCCCCEEEEECCCCEEEEEEEEe
Confidence 00122234444421 125788899999999999765
No 153
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=4.2e-19 Score=200.58 Aligned_cols=279 Identities=12% Similarity=0.071 Sum_probs=195.5
Q ss_pred EEECCCCCEEEEEEcCCC--eEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecc
Q 002266 23 ILWDQQAHHLVTASSSET--TISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNIT 100 (945)
Q Consensus 23 vafspdg~~L~t~g~~dg--~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~ 100 (945)
.+|||||++|++++..++ .|.+||+.++ .......++...+..++|+|||+.|+.++.++.|++||+.+++....+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ-VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTC-EEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCC-ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 789999999999874466 4888888765 3344455555555578899999999999999999999999988766555
Q ss_pred cCCCCEEEEE--EecCCCEEEEEE----------------------CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEcc-
Q 002266 101 RFTLPIRVLA--FNKSGSMLAAAG----------------------DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP- 155 (945)
Q Consensus 101 ~~~~~V~~l~--fspdg~~Lasgs----------------------~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafsp- 155 (945)
.+...+.... +++++.+++... .+..|++||+.+++.. .+..+...+..++|+|
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPY 198 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETT
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCC
Confidence 4444444444 489999887532 3467999999988654 4445677899999999
Q ss_pred CCCEEEEEeCC------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC-CC----eEEEEECC
Q 002266 156 NSEYLASIDSI------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL-KN----DVVMYDRD 224 (945)
Q Consensus 156 dg~~Las~s~D------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~-dg----~I~vwD~~ 224 (945)
+|+.|+.+..+ ..|.++|+..+.. ..+... .....+..++|+|+|+.|+..+. ++ .|++||+.
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTH-----AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE 272 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCC-----CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeC-----CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecC
Confidence 99988877653 3678888765543 222110 11124667899999998766443 22 39999999
Q ss_pred CCcEEE--eecCCCCC---CeEEEEEcCCCCEEEEE---------ECCCeEEEEECCCCeeeeeccCCC-----------
Q 002266 225 TAEKLF--SLRGDHVQ---PICFLSWSPNGKYMATS---------SLDRQILIWDVGKKLDIDRQKFDD----------- 279 (945)
Q Consensus 225 t~~~~~--~~~~~h~~---~I~~l~fSpdg~~Lasg---------s~Dg~I~IWD~~~~~~i~~~~~~~----------- 279 (945)
+++... .+.. +.. ....++|+|+|++|+.. ..+..|++||+.++.......+..
T Consensus 273 ~g~~~~l~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 351 (388)
T 3pe7_A 273 TLENRQLTSMPA-CSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQV 351 (388)
T ss_dssp TCCEEEEEEECC-EEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSST
T ss_pred CCceEEEEcCCC-ceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCccccccccccc
Confidence 887432 3222 100 01223799999988754 446789999999987765555544
Q ss_pred CeeEEEEecCCCEEEEEE-cCCeEEEEecCCC
Q 002266 280 RICCMAWKPIGNALAVID-VMGKYGVWESVVP 310 (945)
Q Consensus 280 ~V~~la~spdg~~Las~s-~DG~I~iWd~~~~ 310 (945)
.+.+++|+|+|+.|++++ .+|...||.+..+
T Consensus 352 ~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 352 THPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp TCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred CCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 578899999999888765 5777788876544
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=3.7e-18 Score=190.20 Aligned_cols=254 Identities=11% Similarity=0.084 Sum_probs=176.2
Q ss_pred CCCEEEEEECCCCCEEEEEEc--CCCeEEEEcCCCCcc-ccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcC-
Q 002266 17 AASFCSILWDQQAHHLVTASS--SETTISIHDPLLPSN-LPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFP- 91 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~--~dg~V~IWd~~~~~~-~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~- 91 (945)
...+..++|+|+|+ |++++. .++.|++|++..+.. ....+..+...+..++|+|+|++|++++ .++.|.+|++.
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 35677899999999 666652 268999999855431 2223344677889999999999998888 67999999995
Q ss_pred CCe--eeeeccc---------CCCCEEEEEEecCCCEEEEEECCCcEEEEEcC-CCeEEE--EEecC-CCCEEEEEEccC
Q 002266 92 GGE--FQTNITR---------FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI-DGSIAR--VLKGH-KGPVTGLAFDPN 156 (945)
Q Consensus 92 ~g~--~~~~l~~---------~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~-~~~~~~--~l~~h-~~~V~~lafspd 156 (945)
++. .+..+.. ....+.+++|+|+|+++++...++.|.+|++. ++.... .+..+ ...+..++|+|+
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spd 197 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPD 197 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTT
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCC
Confidence 333 2222221 12248899999999966666668889999998 454322 22222 346789999999
Q ss_pred CCEEEE-EeCCCcEEEEEccC--Cee--eeeecccCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECCC---Cc
Q 002266 157 SEYLAS-IDSIGTVIYWELQS--GRE--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRDT---AE 227 (945)
Q Consensus 157 g~~Las-~s~Dg~I~iwDl~t--~~~--i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~t---~~ 227 (945)
|++|++ +..++.|.+|++.. ++. +..+...... ......+..++|+|+|++|+++ ..++.|.+|++.. ..
T Consensus 198 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~ 276 (347)
T 3hfq_A 198 GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD-YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLT 276 (347)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT-CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC-CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEE
Confidence 997666 45678999999885 442 2222211111 1112457889999999988554 4589999999872 24
Q ss_pred EEEeecCCCCCCeEEEEEcCCCCEEEEEECC-CeEEEEE--CCCCeeee
Q 002266 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSLD-RQILIWD--VGKKLDID 273 (945)
Q Consensus 228 ~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D-g~I~IWD--~~~~~~i~ 273 (945)
.+..+.. +...+..++|+|+|++|++++.+ +.|.+|+ ..++++..
T Consensus 277 ~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 277 LIQQIST-EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEEEC-SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EeEEEec-CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 4455544 45678899999999999888764 8999994 45666553
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=8.1e-18 Score=188.68 Aligned_cols=276 Identities=14% Similarity=0.140 Sum_probs=187.7
Q ss_pred CCCCEEEEEE---cCCCeEEEEcCCC--CccccccccccccceEEEEEecCCCEEEEEEcC----CcEEEEEcCC--Cee
Q 002266 27 QQAHHLVTAS---SSETTISIHDPLL--PSNLPKILRHHRDGVTALALSPNSTCLASGSID----HSVKLYKFPG--GEF 95 (945)
Q Consensus 27 pdg~~L~t~g---~~dg~V~IWd~~~--~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~D----g~V~iwdl~~--g~~ 95 (945)
+...++++++ +.++.|.+|.+.. +........ +...+..++|+|+|++|++++.+ +.|.+|++.. +..
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 3344556653 2467899987643 321111122 66778899999999999998875 7999998865 443
Q ss_pred e--eecccCCCCEEEEEEecCCCEEEEEE-CCCcEEEEEcCCCeEEE----EE--ec--------CCCCEEEEEEccCCC
Q 002266 96 Q--TNITRFTLPIRVLAFNKSGSMLAAAG-DDEGIKLINTIDGSIAR----VL--KG--------HKGPVTGLAFDPNSE 158 (945)
Q Consensus 96 ~--~~l~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~iwd~~~~~~~~----~l--~~--------h~~~V~~lafspdg~ 158 (945)
. .....+......+++ ++++|++++ .++.|.+|++.....+. .+ .+ +...+.+++|+|+|+
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 2 233334556777887 888888777 57889999997543221 11 11 123468899999999
Q ss_pred EEEEEe-CCCcEEEEEccCCee------eeee---cccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCc
Q 002266 159 YLASID-SIGTVIYWELQSGRE------LHNL---KRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAE 227 (945)
Q Consensus 159 ~Las~s-~Dg~I~iwDl~t~~~------i~~~---~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~ 227 (945)
+|++++ .++.|.+|++..... +... ... ..........++|+|+|+++++++ .++.|.+|++.++.
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF---KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE---ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce---ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 776655 478999999875432 1111 000 001234567899999999888877 58999999998765
Q ss_pred E--EEeecC--CCCCCeEEEEEcCCCCEEEEEECC--CeEEEEECC--CCe--eeeeccCCCCeeEEEEecCCCEEEEEE
Q 002266 228 K--LFSLRG--DHVQPICFLSWSPNGKYMATSSLD--RQILIWDVG--KKL--DIDRQKFDDRICCMAWKPIGNALAVID 297 (945)
Q Consensus 228 ~--~~~~~~--~h~~~I~~l~fSpdg~~Lasgs~D--g~I~IWD~~--~~~--~i~~~~~~~~V~~la~spdg~~Las~s 297 (945)
. +..+.. .+......++|+|+|++|+++..+ +.|.||++. ++. .+........+.+++|+|+|++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEE
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEE
Confidence 3 222221 233557899999999998776654 899999996 444 333333355788999999999988887
Q ss_pred -cCCeEEEEecC
Q 002266 298 -VMGKYGVWESV 308 (945)
Q Consensus 298 -~DG~I~iWd~~ 308 (945)
.++.|.+|++.
T Consensus 325 ~~~~~v~v~~~d 336 (361)
T 3scy_A 325 RDTNVIQIFERD 336 (361)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCCEEEEEEE
Confidence 67899997654
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.6e-19 Score=222.22 Aligned_cols=281 Identities=15% Similarity=0.120 Sum_probs=197.8
Q ss_pred EEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccccccc---ceEEEEEecCCCEEEEEEc---------CCcEEEEE
Q 002266 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRD---GVTALALSPNSTCLASGSI---------DHSVKLYK 89 (945)
Q Consensus 22 svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~---~V~~la~spdg~~Lasgs~---------Dg~V~iwd 89 (945)
+++|+|+|++++ ++ .|+.|++||+.++. ....+..|.. .+.+++|||||++|++++. ++.|++||
T Consensus 20 ~~~~s~dg~~~~-~~-~d~~i~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLH-QS-ADNNIVLYNIETGQ-SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEE-EC-TTSCEEEEESSSCC-EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEE-Ec-CCCCEEEEEcCCCc-EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 678999996444 44 69999999988763 3444444433 4899999999999998876 68999999
Q ss_pred cCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE-ecCCCCE-----------------EEE
Q 002266 90 FPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPV-----------------TGL 151 (945)
Q Consensus 90 l~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l-~~h~~~V-----------------~~l 151 (945)
+.+++.... ......+..++|+|||+.|+++. ++.|++|++.++...... .++...| .++
T Consensus 97 ~~~g~~~~~-~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 97 LSNGEFVRG-NELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTTEECCS-SCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCCccccc-eecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 999886211 11235688999999999999986 779999999887754432 2333323 489
Q ss_pred EEccCCCEEEEEeCCC----------------------------------cEEEEEccCCeee--eeecccCCCCCCCCC
Q 002266 152 AFDPNSEYLASIDSIG----------------------------------TVIYWELQSGREL--HNLKRVAPDIGSDPS 195 (945)
Q Consensus 152 afspdg~~Las~s~Dg----------------------------------~I~iwDl~t~~~i--~~~~~~~~~~~~~~~ 195 (945)
+|+|||++|++++.|. .|++||+.+++.. ..+... .....+..
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~ 253 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP-AMIASSDY 253 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCC-HHHHTSCE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCC-ccCCCCcc
Confidence 9999999999987652 7889998877542 111100 01113455
Q ss_pred CceEEEEcCCCCEEEEEeCC----CeEEEEE----CCCCcEEEeec---CCCCCCeE-----EEEEcCCCCEEEE--EEC
Q 002266 196 SMNVLSWSPDGETLAVPGLK----NDVVMYD----RDTAEKLFSLR---GDHVQPIC-----FLSWSPNGKYMAT--SSL 257 (945)
Q Consensus 196 ~i~~l~~spdg~~La~gs~d----g~I~vwD----~~t~~~~~~~~---~~h~~~I~-----~l~fSpdg~~Las--gs~ 257 (945)
.+..++|+||++++++.... ..|.+|| ..+++....+. ..|...+. .+.|+|+|+.|+. +..
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 67899999998777664332 2488999 77776544432 22556665 7899999996654 434
Q ss_pred CC--eEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcC-----CeEEEEecCC
Q 002266 258 DR--QILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVM-----GKYGVWESVV 309 (945)
Q Consensus 258 Dg--~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~D-----G~I~iWd~~~ 309 (945)
+| .|++||+.++.......+...+..+.++ +++.|++.+.+ +.+.+|.+..
T Consensus 334 ~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 334 DGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp TSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 55 5777888777644444445567888777 88888777765 8899998764
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=2.7e-17 Score=184.47 Aligned_cols=263 Identities=14% Similarity=0.146 Sum_probs=182.3
Q ss_pred CCCEEEEEECCCCCEEEEEEc---CCCeEEEEcCCCC-ccc--cccccccccceEEEEEecCCCEEEEEE-cCCcEEEEE
Q 002266 17 AASFCSILWDQQAHHLVTASS---SETTISIHDPLLP-SNL--PKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYK 89 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~---~dg~V~IWd~~~~-~~~--~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwd 89 (945)
...+..++|+|+|++|++++. .++.|.+|++... ... ......+......+++ ++++|++++ .++.|.+|+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 356777899999999999873 2389999987653 121 1222234556777887 888888776 578999999
Q ss_pred cCCCeeeeecc--------------cCCCCEEEEEEecCCCEEEEEEC-CCcEEEEEcCCCe-------E------EEEE
Q 002266 90 FPGGEFQTNIT--------------RFTLPIRVLAFNKSGSMLAAAGD-DEGIKLINTIDGS-------I------ARVL 141 (945)
Q Consensus 90 l~~g~~~~~l~--------------~~~~~V~~l~fspdg~~Lasgs~-Dg~I~iwd~~~~~-------~------~~~l 141 (945)
+.....+..+. .+...+.+++|+|+|++|++++. ++.|.+|++.... . ....
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 97543222111 11234688999999997776664 7889999987543 1 1122
Q ss_pred ecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEEccCCeee--eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC--C
Q 002266 142 KGHKGPVTGLAFDPNSEYLASID-SIGTVIYWELQSGREL--HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK--N 216 (945)
Q Consensus 142 ~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwDl~t~~~i--~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d--g 216 (945)
..+...+.+++|+|+|++|++++ .++.|.+|++.++... ..+.. ...+......++|+|+|++|+++..+ +
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~----~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA----DTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES----CSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec----CCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 33456688999999999887777 6899999999877542 22221 11222445789999999999777665 8
Q ss_pred eEEEEECC--CCc--EEEeecCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEC--CCCeeeeec--cCCCCeeEEEEe
Q 002266 217 DVVMYDRD--TAE--KLFSLRGDHVQPICFLSWSPNGKYMATSS-LDRQILIWDV--GKKLDIDRQ--KFDDRICCMAWK 287 (945)
Q Consensus 217 ~I~vwD~~--t~~--~~~~~~~~h~~~I~~l~fSpdg~~Lasgs-~Dg~I~IWD~--~~~~~i~~~--~~~~~V~~la~s 287 (945)
.|.+|++. +++ .+..+.. ...+..++|+|+|++|++++ .++.|.+|++ .++++.... .+...+.|+.|.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 89999985 444 3444432 35678999999999998887 5789999655 566665442 233568888886
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=1.8e-17 Score=186.97 Aligned_cols=275 Identities=14% Similarity=0.061 Sum_probs=185.2
Q ss_pred EEEEEcC-CCeEEEEcCCCCcccccccc----ccccceEEEEEecCCCEEEEEEcCCcEEEEEcC-CCeeeeeccc-CCC
Q 002266 32 LVTASSS-ETTISIHDPLLPSNLPKILR----HHRDGVTALALSPNSTCLASGSIDHSVKLYKFP-GGEFQTNITR-FTL 104 (945)
Q Consensus 32 L~t~g~~-dg~V~IWd~~~~~~~~~~l~----~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~-~g~~~~~l~~-~~~ 104 (945)
|++++.. ++.|.+|++.........+. .+...+..++|+|+|++|++++.+ .|.+|++. +++....... ..+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 4555433 25677766432211111111 233467899999999999998887 99999997 7776433221 112
Q ss_pred CEEEEEEecCCCE--EEEEE-------------CCCcEEEEEcC-CCeEEEEEe----cCCCCEEEEEEccCCCEEEEEe
Q 002266 105 PIRVLAFNKSGSM--LAAAG-------------DDEGIKLINTI-DGSIARVLK----GHKGPVTGLAFDPNSEYLASID 164 (945)
Q Consensus 105 ~V~~l~fspdg~~--Lasgs-------------~Dg~I~iwd~~-~~~~~~~l~----~h~~~V~~lafspdg~~Las~s 164 (945)
.+.+++|+|+|++ ++++. .++.+.+|++. +++....+. .+...+.+++|+|+|++|++++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3556899999995 44442 68899999997 465544443 2456899999999999888776
Q ss_pred C-CCcEEEEEcc-CCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC-CCeEEEEECC--CCcEE---E---eec
Q 002266 165 S-IGTVIYWELQ-SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL-KNDVVMYDRD--TAEKL---F---SLR 233 (945)
Q Consensus 165 ~-Dg~I~iwDl~-t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~-dg~I~vwD~~--t~~~~---~---~~~ 233 (945)
. ++.|++|++. +++........ ...+...+..++|+|+|++|++++. ++.|.+|++. +++.. . .+.
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~---~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVD---APDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEE---CSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEe---cCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 4 6799999998 66543211110 0012345788999999999988765 6899999765 45432 1 222
Q ss_pred CC---CCC------CeEEEE-EcCCCCEEEEEECC-C-----eEEEEECC-CCeeee---ec-cCCCCeeEEEEec---C
Q 002266 234 GD---HVQ------PICFLS-WSPNGKYMATSSLD-R-----QILIWDVG-KKLDID---RQ-KFDDRICCMAWKP---I 289 (945)
Q Consensus 234 ~~---h~~------~I~~l~-fSpdg~~Lasgs~D-g-----~I~IWD~~-~~~~i~---~~-~~~~~V~~la~sp---d 289 (945)
.. +.. .+..++ |+|+|++|++++.+ + .|.+|++. +++... .. .+...+..++|+| +
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcC
Confidence 11 121 478899 99999998877543 2 89999996 565443 12 2345678899999 8
Q ss_pred CCEEEEEEcC-CeEEEEecCCC
Q 002266 290 GNALAVIDVM-GKYGVWESVVP 310 (945)
Q Consensus 290 g~~Las~s~D-G~I~iWd~~~~ 310 (945)
|++|++++.+ +.|.+|++...
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEEEcCCCeEEEEEEchh
Confidence 9999998865 89999987543
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=3.9e-18 Score=204.56 Aligned_cols=232 Identities=15% Similarity=0.075 Sum_probs=175.4
Q ss_pred cccceEEEEEecCCCEEEEEEc-CCcEEEEEcCCCeeeeecccCC-CCEEEEEEecCCCEEEEEEC---CCcEEEEEcCC
Q 002266 60 HRDGVTALALSPNSTCLASGSI-DHSVKLYKFPGGEFQTNITRFT-LPIRVLAFNKSGSMLAAAGD---DEGIKLINTID 134 (945)
Q Consensus 60 h~~~V~~la~spdg~~Lasgs~-Dg~V~iwdl~~g~~~~~l~~~~-~~V~~l~fspdg~~Lasgs~---Dg~I~iwd~~~ 134 (945)
+..+|++++|+|||++||+++. ||+++||++.+++.. .+..+. ..+..++|+|+ +++++++. +....+|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 3568999999999999999887 999999999777654 444455 68999999999 77777664 44455654432
Q ss_pred ---CeEEEEEecCCCCEEEEEEccCCCE-EEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEE
Q 002266 135 ---GSIARVLKGHKGPVTGLAFDPNSEY-LASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210 (945)
Q Consensus 135 ---~~~~~~l~~h~~~V~~lafspdg~~-Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La 210 (945)
+... .+..+ ..+...+|+|+|+. +++++.++.+.+||+.+++........ . ..++|+|||++|+
T Consensus 98 ~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~--------~--~~~~~spDG~~la 165 (582)
T 3o4h_A 98 SRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP--------G--FGFVSDIRGDLIA 165 (582)
T ss_dssp TSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES--------S--CEEEEEEETTEEE
T ss_pred cCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC--------C--ceEEECCCCCEEE
Confidence 2222 33322 33556788888863 334444555669999988765443211 1 6799999999999
Q ss_pred EEeCC----CeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCC--eEEEEECCCCeeeeeccCCCCeeEE
Q 002266 211 VPGLK----NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDR--QILIWDVGKKLDIDRQKFDDRICCM 284 (945)
Q Consensus 211 ~gs~d----g~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg--~I~IWD~~~~~~i~~~~~~~~V~~l 284 (945)
+++.+ +.|++||+.+++.. .+.. +...+..++|||||++|+++..++ .|++||+.+++......+...+..+
T Consensus 166 ~~~~~~~~~~~i~~~d~~~g~~~-~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 243 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSSGGLR-VFDS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSY 243 (582)
T ss_dssp EEEEEETTEEEEEEEETTTCCCE-EECC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHH
T ss_pred EEEEcCCCCeEEEEEcCCCCCce-Eeec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhh
Confidence 88776 78999999888765 4444 777889999999999999888888 8999999998877334555566666
Q ss_pred E--------EecCCCEEEEEEcCCeEEEEec
Q 002266 285 A--------WKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 285 a--------~spdg~~Las~s~DG~I~iWd~ 307 (945)
+ |+|+|..+++++.+|.+++|++
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 6 9999988899999999999998
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=3.5e-17 Score=184.56 Aligned_cols=248 Identities=11% Similarity=0.109 Sum_probs=172.9
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCC-CCcccccccccc-ccceEEEEEecCCCE--EEEEE-------------
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPL-LPSNLPKILRHH-RDGVTALALSPNSTC--LASGS------------- 80 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~-~~~~~~~~l~~h-~~~V~~la~spdg~~--Lasgs------------- 80 (945)
..+..++|+|+|++|++++ .+ .|.+|++. ++ ......... .+.+.+++|+|+|++ ++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~-~~-~v~~~~~~~~g-~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAA-MK-KWSSFAVKSPT-EIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCCSEEEECTTSSEEEEEE-BT-EEEEEEEEETT-EEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCcEEEECCCCCEEEEEc-cc-eEEEEEECCCC-CEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 4678899999999998886 55 99999986 44 222221111 123556899999984 44542
Q ss_pred cCCcEEEEEcC-CCeeeeecc----cCCCCEEEEEEecCCCEEEEEEC-CCcEEEEEcC-CCeEE--EEEe--cCCCCEE
Q 002266 81 IDHSVKLYKFP-GGEFQTNIT----RFTLPIRVLAFNKSGSMLAAAGD-DEGIKLINTI-DGSIA--RVLK--GHKGPVT 149 (945)
Q Consensus 81 ~Dg~V~iwdl~-~g~~~~~l~----~~~~~V~~l~fspdg~~Lasgs~-Dg~I~iwd~~-~~~~~--~~l~--~h~~~V~ 149 (945)
.+|.+.+|++. +++....+. .+...+.+++|+|+|++|+++.. ++.|++|++. +++.. ..+. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 465543333 24567999999999999888764 6789999998 67643 2333 2456799
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEEcc--CCeeee---eecccCCCCCCCCC------CceEEE-EcCCCCEEEEEeCCC
Q 002266 150 GLAFDPNSEYLASIDS-IGTVIYWELQ--SGRELH---NLKRVAPDIGSDPS------SMNVLS-WSPDGETLAVPGLKN 216 (945)
Q Consensus 150 ~lafspdg~~Las~s~-Dg~I~iwDl~--t~~~i~---~~~~~~~~~~~~~~------~i~~l~-~spdg~~La~gs~dg 216 (945)
.++|+|+|++|++++. ++.|.+|++. +++... .+.........+.. .+..++ |+|+|++|+++..+.
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 9999999999888765 6899999875 454321 22211111111111 467899 999999988876433
Q ss_pred ------eEEEEECC-CCcEEE---eecCCCCCCeEEEEEcC---CCCEEEEEECC-CeEEEEECCCC
Q 002266 217 ------DVVMYDRD-TAEKLF---SLRGDHVQPICFLSWSP---NGKYMATSSLD-RQILIWDVGKK 269 (945)
Q Consensus 217 ------~I~vwD~~-t~~~~~---~~~~~h~~~I~~l~fSp---dg~~Lasgs~D-g~I~IWD~~~~ 269 (945)
.|.+|++. +++... .... +...+..++|+| +|++|++++.+ +.|.||++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~-~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPT-PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEEC-SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeec-CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999986 565432 1222 344567789999 89999999864 89999998766
No 161
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=4.8e-18 Score=191.81 Aligned_cols=278 Identities=11% Similarity=0.036 Sum_probs=188.8
Q ss_pred CEEEEEECCCCCEEEEEEcCC--CeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeee
Q 002266 19 SFCSILWDQQAHHLVTASSSE--TTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~d--g~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~ 96 (945)
.+.+++|+|||++|+++...+ ..|++|++.++. .......+......+.|+|||++|+.++.++.|++|++.+++..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQ 115 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcE
Confidence 366788999999998886333 478888887653 22222222222334789999999999999999999999888755
Q ss_pred eecccCCCCEEE-------------------EEEecCCCEEEEE-----ECCCcEEEEEcCCCeEEEEEecCCCCEEEEE
Q 002266 97 TNITRFTLPIRV-------------------LAFNKSGSMLAAA-----GDDEGIKLINTIDGSIARVLKGHKGPVTGLA 152 (945)
Q Consensus 97 ~~l~~~~~~V~~-------------------l~fspdg~~Lasg-----s~Dg~I~iwd~~~~~~~~~l~~h~~~V~~la 152 (945)
.....+...... +.|+|+++.++.+ ..+..|++||+.+++..... .+...+..+.
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~ 194 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPI 194 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccce
Confidence 444433332222 3456777666554 35567999999888765444 5677899999
Q ss_pred Ecc-CCCEEEEEeCC------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC-----CeEEE
Q 002266 153 FDP-NSEYLASIDSI------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-----NDVVM 220 (945)
Q Consensus 153 fsp-dg~~Las~s~D------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d-----g~I~v 220 (945)
|+| ++..|+.++.+ ..|.+||+..+... .+... .....+..++|+|+|++|++.+.+ +.|++
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEH-----AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCC-----CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-Eeecc-----CCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 999 78877766543 35888888655422 22110 012246778999999988776543 44999
Q ss_pred EECCCCcEEEeecCCCCCCeEEEEEcC-CCCEEEEEE----------------CCCeEEEEECCCCeeeeeccCCC----
Q 002266 221 YDRDTAEKLFSLRGDHVQPICFLSWSP-NGKYMATSS----------------LDRQILIWDVGKKLDIDRQKFDD---- 279 (945)
Q Consensus 221 wD~~t~~~~~~~~~~h~~~I~~l~fSp-dg~~Lasgs----------------~Dg~I~IWD~~~~~~i~~~~~~~---- 279 (945)
||+.+++....... . ... +.|+| +|+++++++ .++.|++||+.++.......+..
T Consensus 269 ~d~~~g~~~~l~~~-~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~ 344 (396)
T 3c5m_A 269 ANPETLENEEVMVM-P--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDV 344 (396)
T ss_dssp ECTTTCCEEEEEEC-C--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCC
T ss_pred EECCCCCeEEeeeC-C--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcccc
Confidence 99988865433221 1 233 89999 999888765 34789999998877654444433
Q ss_pred -------CeeEEEEecCCCEEEEEEc-CCeEEEEecC
Q 002266 280 -------RICCMAWKPIGNALAVIDV-MGKYGVWESV 308 (945)
Q Consensus 280 -------~V~~la~spdg~~Las~s~-DG~I~iWd~~ 308 (945)
.+..++|+|+|+.|++++. ++...+|.+.
T Consensus 345 ~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 345 LDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp BTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 2567899999998887764 5666666554
No 162
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=1.3e-17 Score=193.13 Aligned_cols=250 Identities=14% Similarity=0.194 Sum_probs=177.4
Q ss_pred CeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-----------eeee----ecccCCC
Q 002266 40 TTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG-----------EFQT----NITRFTL 104 (945)
Q Consensus 40 g~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g-----------~~~~----~l~~~~~ 104 (945)
+.+++|+... . .+...+..+++++++.+|++++.++ |++|+.... .... ....+..
T Consensus 23 ~~vri~~~~~--~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPE--E------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCS--S------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCcc--c------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 5788887421 1 1234678999999999999999888 888875311 1000 0112456
Q ss_pred CEEEEEEecCCCEEE----EEECCCcEEEEEcCCC--------e---EEEEEecCCCCEEEEEEccC-CCEEEEEeCCCc
Q 002266 105 PIRVLAFNKSGSMLA----AAGDDEGIKLINTIDG--------S---IARVLKGHKGPVTGLAFDPN-SEYLASIDSIGT 168 (945)
Q Consensus 105 ~V~~l~fspdg~~La----sgs~Dg~I~iwd~~~~--------~---~~~~l~~h~~~V~~lafspd-g~~Las~s~Dg~ 168 (945)
.|.+++|+|+|++|+ +|+.|+.|+|||+.++ + ....+.+|...|.+++|+|+ +.+|++++.||+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 799999999999999 6778999999998654 2 24556679999999999997 889999999999
Q ss_pred EEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC------CCCCCeEE
Q 002266 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG------DHVQPICF 242 (945)
Q Consensus 169 I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~------~h~~~I~~ 242 (945)
|++||++++..+.... .|...+.+++|+|+|++|++|+.||.|++||.+ ++....+.. .|...|.+
T Consensus 174 v~iwD~~~~~~~~~~~-------~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 174 IAVLQVTETVKVCATL-------PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp EEEEEESSSEEEEEEE-------CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEE
T ss_pred EEEEEcCCCcceeecc-------CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEE
Confidence 9999999886544332 234678999999999999999999999999998 555544432 12337999
Q ss_pred EEEcCCCCEEEEE-ECCC------eEEEEECCCCe----ee--eecc-------CCCCeeEEEEecCCCEEEEEEc-CCe
Q 002266 243 LSWSPNGKYMATS-SLDR------QILIWDVGKKL----DI--DRQK-------FDDRICCMAWKPIGNALAVIDV-MGK 301 (945)
Q Consensus 243 l~fSpdg~~Lasg-s~Dg------~I~IWD~~~~~----~i--~~~~-------~~~~V~~la~spdg~~Las~s~-DG~ 301 (945)
++|++++.++++. +.+| .+++|++.+.. .. .... ...+-..+.+-++.+++++++. .+.
T Consensus 246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~d 325 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTE 325 (434)
T ss_dssp EEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSB
T ss_pred EEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCc
Confidence 9999998887654 3443 38999997642 11 1111 1112223444477776666554 445
Q ss_pred EEEEe
Q 002266 302 YGVWE 306 (945)
Q Consensus 302 I~iWd 306 (945)
|.++.
T Consensus 326 v~vl~ 330 (434)
T 2oit_A 326 VSILA 330 (434)
T ss_dssp CEEEE
T ss_pred eeEEE
Confidence 66665
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=2.3e-17 Score=202.81 Aligned_cols=281 Identities=11% Similarity=-0.010 Sum_probs=190.3
Q ss_pred CEEEEEECCCCCEEEEEEc--------CCCeEEEEcCCCCcccc-ccccccccceEEEEEecCCCEEEEEEcCCcEEEEE
Q 002266 19 SFCSILWDQQAHHLVTASS--------SETTISIHDPLLPSNLP-KILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK 89 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~--------~dg~V~IWd~~~~~~~~-~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd 89 (945)
.|.+++|||||++|++++. .++.|++||+.++.... ..+ ...+..++|+|||++|+++. ++.|++|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEe
Confidence 3889999999999998863 16899999987764310 222 25688999999999999975 78999999
Q ss_pred cCCCeeeeec-ccCCCCE-----------------EEEEEecCCCEEEEEECCC--------------------------
Q 002266 90 FPGGEFQTNI-TRFTLPI-----------------RVLAFNKSGSMLAAAGDDE-------------------------- 125 (945)
Q Consensus 90 l~~g~~~~~l-~~~~~~V-----------------~~l~fspdg~~Lasgs~Dg-------------------------- 125 (945)
+.+++..... .++...| .+++|+|||++|++++.|.
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 9888765432 1222222 4899999999999988652
Q ss_pred --------cEEEEEcCCCeEE---E-----EEecCCCCEEEEEEccCCCEEEEEeCCC----cEEEEE----ccCCeeee
Q 002266 126 --------GIKLINTIDGSIA---R-----VLKGHKGPVTGLAFDPNSEYLASIDSIG----TVIYWE----LQSGRELH 181 (945)
Q Consensus 126 --------~I~iwd~~~~~~~---~-----~l~~h~~~V~~lafspdg~~Las~s~Dg----~I~iwD----l~t~~~i~ 181 (945)
.|++||+.++... . .+.+|...+.+++|+||++++++....+ .|.+|| +.+++...
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 6889999887642 1 1235778899999999987777644322 488899 76665443
Q ss_pred eecccCCCCCCCCCCce-----EEEEcCCCCEEEE--EeCCC--eEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEE
Q 002266 182 NLKRVAPDIGSDPSSMN-----VLSWSPDGETLAV--PGLKN--DVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYM 252 (945)
Q Consensus 182 ~~~~~~~~~~~~~~~i~-----~l~~spdg~~La~--gs~dg--~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~L 252 (945)
.+... ...+...+. .++|+|+|+.|+. ...++ .|++||+.+++ ...+.. +...+..+.++ +++.|
T Consensus 297 ~~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~-~~~~v~~~~~~-d~~~i 370 (719)
T 1z68_A 297 TQEHI---EESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS-GKWEAINIFRV-TQDSL 370 (719)
T ss_dssp GGEEE---EECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC-SSSCEEEEEEE-CSSEE
T ss_pred EEecc---cccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc-CceEEEEEEEE-eCCEE
Confidence 32100 001122233 6899999996655 33444 57888887766 344443 55567887777 88877
Q ss_pred EEEECC-----CeEEEEECCC--Ce--eeeec----cCCCCeeEEEEecCCCEEEEE-EcC--CeEEEEecCC
Q 002266 253 ATSSLD-----RQILIWDVGK--KL--DIDRQ----KFDDRICCMAWKPIGNALAVI-DVM--GKYGVWESVV 309 (945)
Q Consensus 253 asgs~D-----g~I~IWD~~~--~~--~i~~~----~~~~~V~~la~spdg~~Las~-s~D--G~I~iWd~~~ 309 (945)
+..+.+ +.+.||.+.. +. ..... .+...+..+.|+|+++.|+.. +.. ..+.+|++..
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~ 443 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRT 443 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSS
T ss_pred EEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCC
Confidence 777665 7788887753 32 11111 144567899999999877653 333 4577887643
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=7.5e-17 Score=199.44 Aligned_cols=283 Identities=13% Similarity=0.094 Sum_probs=191.4
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccc-----eEEEEEecCCCEEEEEEcC---------C
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDG-----VTALALSPNSTCLASGSID---------H 83 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~-----V~~la~spdg~~Lasgs~D---------g 83 (945)
....+++|+|||++++++ |+.|++||+.++.. ...+..|... ...++|||||++|+.++.+ +
T Consensus 17 ~~~~~~~w~~dg~~~~~~---~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ---ENNILVFNAEYGNS-SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECSSSEEEEEE---TTEEEEEETTTCCE-EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECCCCcEEEEc---CCcEEEEECCCCce-EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 446688999999877764 89999999988743 4445555432 3458899999999998875 5
Q ss_pred cEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE-ecCCCCE--------------
Q 002266 84 SVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL-KGHKGPV-------------- 148 (945)
Q Consensus 84 ~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l-~~h~~~V-------------- 148 (945)
.+.+||+.+++.. .+..+...+...+|||||+.||.+. ++.|++|++.++...+.. .++...+
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6779999998854 4666778899999999999999985 678999999887654321 2333323
Q ss_pred ---EEEEEccCCCEEEEEeCCC------------------------------------cEEEEEccC---Ce--eeeeec
Q 002266 149 ---TGLAFDPNSEYLASIDSIG------------------------------------TVIYWELQS---GR--ELHNLK 184 (945)
Q Consensus 149 ---~~lafspdg~~Las~s~Dg------------------------------------~I~iwDl~t---~~--~i~~~~ 184 (945)
..+.|+|||++|+.++.|. .|++||+.+ +. ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 3489999999999875332 467777776 52 111221
Q ss_pred ccCCCCCCCCCCceEEEEcCCCCEEEEEeC----CCeEEEEECCCCc----EE--Eee-cCCCCCCeE-----EEEEcCC
Q 002266 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGL----KNDVVMYDRDTAE----KL--FSL-RGDHVQPIC-----FLSWSPN 248 (945)
Q Consensus 185 ~~~~~~~~~~~~i~~l~~spdg~~La~gs~----dg~I~vwD~~t~~----~~--~~~-~~~h~~~I~-----~l~fSpd 248 (945)
.. .....+...+..++|+|||+.++.... +..|++||+.+++ +. ..+ ...+...|. .+.|+||
T Consensus 251 ~~-~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 251 AP-ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CC-HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred CC-ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 10 000024456788999999997666533 2379999998886 21 111 112444443 6889999
Q ss_pred CCEEE-EEEC-C--CeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcC-----CeEEEEecC
Q 002266 249 GKYMA-TSSL-D--RQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVM-----GKYGVWESV 308 (945)
Q Consensus 249 g~~La-sgs~-D--g~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~D-----G~I~iWd~~ 308 (945)
|+.|+ ..+. + ..|++||+.++...........|..+.+ ++++.|+..+.. +...||.+.
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEE
Confidence 99877 6654 3 4689999988776665544555666543 557766665543 445566543
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=2.2e-16 Score=174.62 Aligned_cols=246 Identities=11% Similarity=0.049 Sum_probs=168.3
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccc-cc-----ccceEEEEEecCCCEEEEEEcC----------
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR-HH-----RDGVTALALSPNSTCLASGSID---------- 82 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~-~h-----~~~V~~la~spdg~~Lasgs~D---------- 82 (945)
.+..++|+|+|+++++++..++.|.+||+.++.. ...+. .+ ...+.+++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-EEEEEcccccccccccccceEECCCCCEEEEEccccccccccccc
Confidence 4678999999998887776789999999877643 32332 22 2347889999999999998865
Q ss_pred --CcEEEEEcCCCeeeeec--ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCC------------
Q 002266 83 --HSVKLYKFPGGEFQTNI--TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKG------------ 146 (945)
Q Consensus 83 --g~V~iwdl~~g~~~~~l--~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~------------ 146 (945)
+.|.+||+.+++....+ ..+...+.+++|+|+|+ +++++ +.|.+||+.+++....+..+..
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 89999999875433222 12344688899999999 55553 3499999999988777654320
Q ss_pred ------------CEEEEEEccCCCEEEEEe-CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC-CCCEEEEE
Q 002266 147 ------------PVTGLAFDPNSEYLASID-SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVP 212 (945)
Q Consensus 147 ------------~V~~lafspdg~~Las~s-~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La~g 212 (945)
...++++++++....... ....+..++..+++.. .+... .....+..++|+| +|++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~sp~dg~~l~~~ 273 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH-TQEFA-----DLTELYFTGLRSPKDPNQIYGV 273 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE-EEEEE-----ECSSCEEEEEECSSCTTEEEEE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE-ecccc-----cCCCcceeeEecCCCCCEEEEE
Confidence 234566665542110000 0011222444433211 11100 0224567899999 99999988
Q ss_pred eCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCC
Q 002266 213 GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD 278 (945)
Q Consensus 213 s~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~ 278 (945)
++.|.+||+.+++.+..+.. ...+..++|+|+|++|++++.++.|.+||+.+++.+..+...
T Consensus 274 --~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 274 --LNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp --ESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred --cCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 88999999999988777753 345778999999999988888999999999999887765443
No 166
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=1.7e-15 Score=168.20 Aligned_cols=259 Identities=12% Similarity=0.084 Sum_probs=184.4
Q ss_pred CCEEEEEECCCCCEEEEEEc--------CCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcC---C--c
Q 002266 18 ASFCSILWDQQAHHLVTASS--------SETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSID---H--S 84 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~--------~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~D---g--~ 84 (945)
..+..+++ ||++++.... .++.|++|++.++. ...+ ..+..++|+|||++|+.++.+ + .
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--RRFI----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--EEEE----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--eEEc----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 56888888 9999887631 25689999987653 2223 568899999999999987654 3 4
Q ss_pred EEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECC---------------------------CcEEEEEcCCCeE
Q 002266 85 VKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDD---------------------------EGIKLINTIDGSI 137 (945)
Q Consensus 85 V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~D---------------------------g~I~iwd~~~~~~ 137 (945)
|.+|++.+++...... ... +..++|+|+|+.|+.++.+ ..|++||+.+++.
T Consensus 87 l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 87 IWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred EEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 7888888877654443 334 9999999999999988743 4689999988876
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEEeCCC-------cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEE
Q 002266 138 ARVLKGHKGPVTGLAFDPNSEYLASIDSIG-------TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210 (945)
Q Consensus 138 ~~~l~~h~~~V~~lafspdg~~Las~s~Dg-------~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La 210 (945)
+..+.. . .+..++|+|+| +++++..++ ...||.+.+++. ..+... ..+. .++|+|++|+
T Consensus 165 ~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~--------~~~~--~~spdg~~l~ 230 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK--------VSFY--AVDSDGERIL 230 (347)
T ss_dssp EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE--------ESEE--EEEECSSCEE
T ss_pred EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC--------ccee--eECCCCCEEE
Confidence 455554 3 78899999999 777776542 345555544443 233211 1222 3499999988
Q ss_pred EEeCC--------CeEEEEECCCCcEEEeecCCCCCCeEE-EEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCe
Q 002266 211 VPGLK--------NDVVMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRI 281 (945)
Q Consensus 211 ~gs~d--------g~I~vwD~~t~~~~~~~~~~h~~~I~~-l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V 281 (945)
+.+.+ ..|++|| +++.. .+...+...+.. +.|+ +| ++++++.++.++|| +.++.......+...|
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v 304 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GKEVM-GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWI 304 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SSCEE-ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEE
T ss_pred EEEccccCCccccceEEEEC--CCceE-eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeE
Confidence 87644 4688888 55544 343336677886 9999 88 88999999999999 8766655555556789
Q ss_pred eEEEEecCCCEEEEEEcCCeE-EEEecC
Q 002266 282 CCMAWKPIGNALAVIDVMGKY-GVWESV 308 (945)
Q Consensus 282 ~~la~spdg~~Las~s~DG~I-~iWd~~ 308 (945)
.+++|+| ..+++++.++.. .+|...
T Consensus 305 ~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 305 MGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9999999 677777777654 677654
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=5.5e-16 Score=188.54 Aligned_cols=281 Identities=12% Similarity=0.043 Sum_probs=191.2
Q ss_pred CCCCCEEEEEECCCCCEEEEEE-cCCCeEEEEcCCCCccccccccccccceE---------EEEEe--cCCCE-EEEEEc
Q 002266 15 GNAASFCSILWDQQAHHLVTAS-SSETTISIHDPLLPSNLPKILRHHRDGVT---------ALALS--PNSTC-LASGSI 81 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g-~~dg~V~IWd~~~~~~~~~~l~~h~~~V~---------~la~s--pdg~~-Lasgs~ 81 (945)
+|...|..++|++++-+++... +.++...||....+ .....+..|...+. ...|+ |||+. |+.++.
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD-GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT-SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC-CCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 4568899999997754444441 35788999985333 23445555655555 56666 99998 776554
Q ss_pred -CCcEEEEEcC--C-Ceeeeeccc-----CCCCEEEEEEecCCCEEEEEECC----------CcEEEEEcCC------Ce
Q 002266 82 -DHSVKLYKFP--G-GEFQTNITR-----FTLPIRVLAFNKSGSMLAAAGDD----------EGIKLINTID------GS 136 (945)
Q Consensus 82 -Dg~V~iwdl~--~-g~~~~~l~~-----~~~~V~~l~fspdg~~Lasgs~D----------g~I~iwd~~~------~~ 136 (945)
+..|.+|++. . +. ...+.. +...+..++|+|||+.|++++.+ ..|++||+.+ +.
T Consensus 100 ~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 100 GDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 4567777765 2 43 444554 45678899999999999998876 5799999987 54
Q ss_pred EEEEEe-cCCCCEEEEEEccCCCEEEEEeCCC--------cEEEEEcc-CCe--eeeeecccCCCCCCCCCCceEEEEcC
Q 002266 137 IARVLK-GHKGPVTGLAFDPNSEYLASIDSIG--------TVIYWELQ-SGR--ELHNLKRVAPDIGSDPSSMNVLSWSP 204 (945)
Q Consensus 137 ~~~~l~-~h~~~V~~lafspdg~~Las~s~Dg--------~I~iwDl~-t~~--~i~~~~~~~~~~~~~~~~i~~l~~sp 204 (945)
. ..+. .+...+..++|+|||++|+.++.++ .|++||+. ++. ....+.. .+...+..++|+|
T Consensus 179 ~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~------~~~~~~~~~~~sp 251 (662)
T 3azo_A 179 V-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG------GPEEAIAQAEWAP 251 (662)
T ss_dssp S-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE------ETTBCEEEEEECT
T ss_pred e-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC------CCCceEcceEECC
Confidence 3 4555 5667788899999999999877553 79999998 561 2222221 1234578899999
Q ss_pred CCCEEEEEeCCC--eEEEEECCCCcEEEeecCCCCCC--------eEEEEEcCCCCEEEEEECCCeEEEE--ECCCCeee
Q 002266 205 DGETLAVPGLKN--DVVMYDRDTAEKLFSLRGDHVQP--------ICFLSWSPNGKYMATSSLDRQILIW--DVGKKLDI 272 (945)
Q Consensus 205 dg~~La~gs~dg--~I~vwD~~t~~~~~~~~~~h~~~--------I~~l~fSpdg~~Lasgs~Dg~I~IW--D~~~~~~i 272 (945)
||++++++..++ .|++||..+++....... +... +..++|+|+++++++++. +.++|| |+.++...
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~-~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~ 329 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRR-EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELV 329 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCC-SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccc-cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEE
Confidence 999777777777 677777766665443332 2221 567899999999999998 998998 66666654
Q ss_pred eeccCCCCeeEEEEecCCCE--EEEEEcCCeEEEEec
Q 002266 273 DRQKFDDRICCMAWKPIGNA--LAVIDVMGKYGVWES 307 (945)
Q Consensus 273 ~~~~~~~~V~~la~spdg~~--Las~s~DG~I~iWd~ 307 (945)
....+...+..+ |++++.. +++++.+....+|.+
T Consensus 330 ~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 330 DAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp ECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEE
T ss_pred EecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEE
Confidence 444455566665 2555553 334455555555543
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=4.5e-16 Score=175.64 Aligned_cols=256 Identities=11% Similarity=0.001 Sum_probs=179.7
Q ss_pred EcCCCCccccccccccccceEE-----EEEecCCCEEEEEEc-CC--cEEEEEcCCCeeeeecccCCCCEEEEEEecCCC
Q 002266 45 HDPLLPSNLPKILRHHRDGVTA-----LALSPNSTCLASGSI-DH--SVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGS 116 (945)
Q Consensus 45 Wd~~~~~~~~~~l~~h~~~V~~-----la~spdg~~Lasgs~-Dg--~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~ 116 (945)
++..++ .....+..|...... .+|+|||++|+.++. +| .|.+||+.+++.......+...+..+.|+|+|+
T Consensus 15 ~~~~~g-~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 15 QDASTG-AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp ECTTTC-CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS
T ss_pred ecCCCC-cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC
Confidence 455444 334555666655555 889999999999887 66 488889988887766655555555678999999
Q ss_pred EEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEE--EccCCCEEEEEe----------------------CCCcEEEE
Q 002266 117 MLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLA--FDPNSEYLASID----------------------SIGTVIYW 172 (945)
Q Consensus 117 ~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~la--fspdg~~Las~s----------------------~Dg~I~iw 172 (945)
.|+.++.++.|++||+.+++....+..+...+.... ++|++.+++... .++.|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 999999999999999999987777766666565444 489999887432 34679999
Q ss_pred EccCCeeeeeecccCCCCCCCCCCceEEEEcC-CCCEEEEEeCC------CeEEEEECCCCcEEEeecCCCC-CCeEEEE
Q 002266 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAVPGLK------NDVVMYDRDTAEKLFSLRGDHV-QPICFLS 244 (945)
Q Consensus 173 Dl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La~gs~d------g~I~vwD~~t~~~~~~~~~~h~-~~I~~l~ 244 (945)
|+.+++...... +...+..++|+| +|+.|+..... ..|.++|...+... .+..... ..+..++
T Consensus 174 d~~~g~~~~l~~--------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 174 DLKTGESTVILQ--------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEF 244 (388)
T ss_dssp ETTTCCEEEEEE--------ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEE
T ss_pred ECCCCceEEeec--------CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccce
Confidence 999886543332 123467899999 99999887653 37888888765443 3333122 3577889
Q ss_pred EcCCCCEEEEEEC-CC----eEEEEECCCCeeeeeccCCC------CeeEEEEecCCCEEEEE---------EcCCeEEE
Q 002266 245 WSPNGKYMATSSL-DR----QILIWDVGKKLDIDRQKFDD------RICCMAWKPIGNALAVI---------DVMGKYGV 304 (945)
Q Consensus 245 fSpdg~~Lasgs~-Dg----~I~IWD~~~~~~i~~~~~~~------~V~~la~spdg~~Las~---------s~DG~I~i 304 (945)
|||+|+.|+..+. ++ .|++||+.+++......... ....++|+|+|+.|++. ..+..|++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 9999998866543 22 39999999887544322221 12234799999987764 45668999
Q ss_pred EecCCC
Q 002266 305 WESVVP 310 (945)
Q Consensus 305 Wd~~~~ 310 (945)
|++..+
T Consensus 325 ~d~~~~ 330 (388)
T 3pe7_A 325 FNMKNG 330 (388)
T ss_dssp EETTTT
T ss_pred EeccCC
Confidence 998654
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=7.6e-15 Score=163.02 Aligned_cols=244 Identities=12% Similarity=0.110 Sum_probs=182.2
Q ss_pred CCCEEEEEECCCCCEEEEEEcCC------------------------CeEEEEcCCCCccccccccccccceEEEEEecC
Q 002266 17 AASFCSILWDQQAHHLVTASSSE------------------------TTISIHDPLLPSNLPKILRHHRDGVTALALSPN 72 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~d------------------------g~V~IWd~~~~~~~~~~l~~h~~~V~~la~spd 72 (945)
.+.|.+|+++|+|+.+++.. .+ +.|.+||..++......-..+...+..++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHR-GDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEEC-TTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeC-CCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 46799999999999887765 44 479999987664322222244567899999999
Q ss_pred CCEEEEEEcCCcEEEEEcCCCe-eeeec---------ccCCCCEEEEEEec-CCCEEEEEE-CCCcEEEEEcCCCeEEEE
Q 002266 73 STCLASGSIDHSVKLYKFPGGE-FQTNI---------TRFTLPIRVLAFNK-SGSMLAAAG-DDEGIKLINTIDGSIARV 140 (945)
Q Consensus 73 g~~Lasgs~Dg~V~iwdl~~g~-~~~~l---------~~~~~~V~~l~fsp-dg~~Lasgs-~Dg~I~iwd~~~~~~~~~ 140 (945)
|+++++...++.|++|+..... .+..+ ..+-.....++++| ++.++++.+ .++.|++|+ .++..+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888888999999975442 33333 12334688999999 788888776 689999999 56776666
Q ss_pred EecCC----------CCEEEEEEccC-CCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE
Q 002266 141 LKGHK----------GPVTGLAFDPN-SEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL 209 (945)
Q Consensus 141 l~~h~----------~~V~~lafspd-g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L 209 (945)
+.... ....+|+++|+ +.++++...++.|++||..+++.+..+... .....+..++|+| +..+
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~-----~~~~~~~~~~~~p-g~~~ 254 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA-----SFGRNVFAISYIP-GFLF 254 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-----TTTTCEEEEEEET-TEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-----ccCCCcceeeecC-CEEE
Confidence 64322 34899999998 777777778899999999888887776432 2234567899999 4333
Q ss_pred EE-------EeCCCeEEEEECCCCcEEEeec--CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 210 AV-------PGLKNDVVMYDRDTAEKLFSLR--GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 210 a~-------gs~dg~I~vwD~~t~~~~~~~~--~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
+. ...+..|++|+..+++.+..+. ..+...+..++++|+|.++++...++.|++|++..
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 33 2334589999999999888774 23566789999999998888888899999999754
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=4.1e-15 Score=167.71 Aligned_cols=262 Identities=10% Similarity=0.103 Sum_probs=188.1
Q ss_pred EEEECCCCCEEEEEEc---------CCCeEEEEcCCCCccccccccc------cccceEEEEEecCCCEEEEEEc--CCc
Q 002266 22 SILWDQQAHHLVTASS---------SETTISIHDPLLPSNLPKILRH------HRDGVTALALSPNSTCLASGSI--DHS 84 (945)
Q Consensus 22 svafspdg~~L~t~g~---------~dg~V~IWd~~~~~~~~~~l~~------h~~~V~~la~spdg~~Lasgs~--Dg~ 84 (945)
.++|+|||++|+++.. .++.|.+||..+... ...+.. +......++++|||++|+++.. ++.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~ 132 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCe
Confidence 8899999999998852 256899999876532 333322 2345678999999999998874 578
Q ss_pred EEEEEcCCCeeeee-cccCCCCEEEEEEecCC-CEEEEEECCCcEEEEEcCC-CeEEEEE------ecCCCCEEEEEEcc
Q 002266 85 VKLYKFPGGEFQTN-ITRFTLPIRVLAFNKSG-SMLAAAGDDEGIKLINTID-GSIARVL------KGHKGPVTGLAFDP 155 (945)
Q Consensus 85 V~iwdl~~g~~~~~-l~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~iwd~~~-~~~~~~l------~~h~~~V~~lafsp 155 (945)
|.+||+.+++.+.. +... ....+.+.|++ ..+++.+.||.+.+|++.. ++..... ..+..++ .+.+++
T Consensus 133 v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (361)
T 2oiz_A 133 IGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPAL 209 (361)
T ss_dssp EEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEE
T ss_pred EEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecc
Confidence 99999999988776 5432 22335677765 6788888999999999865 5444221 1222222 334467
Q ss_pred CCCEEEEEeCCCcEEEEEccCCee--eeeecccC---CCCCCCCCCceEEEEcCCCCEEEEEeC-----------CCeEE
Q 002266 156 NSEYLASIDSIGTVIYWELQSGRE--LHNLKRVA---PDIGSDPSSMNVLSWSPDGETLAVPGL-----------KNDVV 219 (945)
Q Consensus 156 dg~~Las~s~Dg~I~iwDl~t~~~--i~~~~~~~---~~~~~~~~~i~~l~~spdg~~La~gs~-----------dg~I~ 219 (945)
++..++..+.++.|.++|+..... ...+.... ............++|+|+++.++++.. .+.|.
T Consensus 210 ~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~ 289 (361)
T 2oiz_A 210 DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIW 289 (361)
T ss_dssp CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEE
T ss_pred cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEE
Confidence 787788788899999999875532 12211100 000000111223789999888887653 34899
Q ss_pred EEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC--eeeeec-cCCCCeeEEEEecCCC
Q 002266 220 MYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKK--LDIDRQ-KFDDRICCMAWKPIGN 291 (945)
Q Consensus 220 vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~--~~i~~~-~~~~~V~~la~spdg~ 291 (945)
+||+.+++.+..+.. +. +..++|+|+|++|++++. +.|.|||..++ +.+..+ ........++++|+|.
T Consensus 290 viD~~t~~~v~~i~~-~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 290 VMDTKTKQRVARIPG-RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEETTTTEEEEEEEC-TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEECCCCcEEEEEec-CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999999999998886 43 899999999999998886 99999999999 988884 6778899999999985
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.68 E-value=7.6e-16 Score=190.37 Aligned_cols=243 Identities=11% Similarity=0.102 Sum_probs=172.6
Q ss_pred ceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCC-----EEEEEEecCCCEEEEEECC---------CcEE
Q 002266 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP-----IRVLAFNKSGSMLAAAGDD---------EGIK 128 (945)
Q Consensus 63 ~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~-----V~~l~fspdg~~Lasgs~D---------g~I~ 128 (945)
...+++|+|||.+|+++ |+.|++|++.+++....+..+... ...+.|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45689999999988886 899999999999877666665432 2448899999999999876 5677
Q ss_pred EEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCC--CCCCC---------CCc
Q 002266 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPD--IGSDP---------SSM 197 (945)
Q Consensus 129 iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~--~~~~~---------~~i 197 (945)
+||+.+++.. .+..|...+..++|+|||+.||.+. ++.|++|++.++............ ..++. ...
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 9999988754 4666788999999999999999884 689999999887644321110000 00000 122
Q ss_pred eEEEEcCCCCEEEEEeCCC------------------------------------eEEEEECCC---Cc--EEEeecC--
Q 002266 198 NVLSWSPDGETLAVPGLKN------------------------------------DVVMYDRDT---AE--KLFSLRG-- 234 (945)
Q Consensus 198 ~~l~~spdg~~La~gs~dg------------------------------------~I~vwD~~t---~~--~~~~~~~-- 234 (945)
..+.|||||++|+..+.|. .|++||+.+ ++ ....+..
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 4589999999999875321 588899988 63 2233332
Q ss_pred ---CCCCCeEEEEEcCCCCEEEEEEC----CCeEEEEECCCCe----eeee-----ccCCCCee-----EEEEecCCCEE
Q 002266 235 ---DHVQPICFLSWSPNGKYMATSSL----DRQILIWDVGKKL----DIDR-----QKFDDRIC-----CMAWKPIGNAL 293 (945)
Q Consensus 235 ---~h~~~I~~l~fSpdg~~Lasgs~----Dg~I~IWD~~~~~----~i~~-----~~~~~~V~-----~la~spdg~~L 293 (945)
.+...+..++|||||++++.... +..|++||+.+++ +... ..+...|. .++|+|||+.|
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 26677999999999997766543 3379999998876 2211 23443333 78999999987
Q ss_pred E-EEE-cCC--eEEEEecCC
Q 002266 294 A-VID-VMG--KYGVWESVV 309 (945)
Q Consensus 294 a-s~s-~DG--~I~iWd~~~ 309 (945)
+ ..+ .+| .|++|+...
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EEEEECTTSCEEEEEEETTC
T ss_pred EEEEEcCCCceEEEEEECCC
Confidence 7 555 444 467777653
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=1e-14 Score=164.40 Aligned_cols=275 Identities=12% Similarity=0.098 Sum_probs=193.9
Q ss_pred CCCCEEEEEEc-----CCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEc----------CCcEEEEEcC
Q 002266 27 QQAHHLVTASS-----SETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI----------DHSVKLYKFP 91 (945)
Q Consensus 27 pdg~~L~t~g~-----~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~----------Dg~V~iwdl~ 91 (945)
+++++++++.. .|+.|.+||..++. ....+..+..+ .++|+|||++|++++. ++.|.+||..
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~-~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGK-FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCC-EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCe-EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 46777776642 36799999987764 34455555444 8999999999998863 5679999999
Q ss_pred CCeeeeecccC------CCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEE-EecCCCCEEEEEEccCC-CEEE
Q 002266 92 GGEFQTNITRF------TLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARV-LKGHKGPVTGLAFDPNS-EYLA 161 (945)
Q Consensus 92 ~g~~~~~l~~~------~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~-l~~h~~~V~~lafspdg-~~La 161 (945)
+++....+... ......++|+|+|++|+++.. ++.|.+||+.+++.+.. +. +. ....+.+.|++ ..++
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AA-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GT-TEEEEEECTTSSSEEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CC-CcceeEEcCCCCeeEE
Confidence 88877766432 235678999999999999874 57899999999988776 44 22 23346677865 5778
Q ss_pred EEeCCCcEEEEEccC-CeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE--EEeec--C--
Q 002266 162 SIDSIGTVIYWELQS-GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK--LFSLR--G-- 234 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t-~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~--~~~~~--~-- 234 (945)
+.+.||.+.+|++.. ++....... .........+ ..+.+++++..++..+.++.|+++|+..... ...+. .
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRS-KQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEEC-CCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccc-cceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence 888999999999865 443322110 0001111111 1234467787888778899999999875432 11111 0
Q ss_pred -----CCCCCeEEEEEcCCCCEEEEEEC-----------CCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEc
Q 002266 235 -----DHVQPICFLSWSPNGKYMATSSL-----------DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDV 298 (945)
Q Consensus 235 -----~h~~~I~~l~fSpdg~~Lasgs~-----------Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~ 298 (945)
........++|+|+++.++++.. .+.|.+||+.+++.+....... +.+++|+|+|++|++++.
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC
Confidence 00111223789999888776643 3489999999999998876666 999999999999998887
Q ss_pred CCeEEEEecCCC
Q 002266 299 MGKYGVWESVVP 310 (945)
Q Consensus 299 DG~I~iWd~~~~ 310 (945)
+.|.+||....
T Consensus 325 -~~v~v~D~~t~ 335 (361)
T 2oiz_A 325 -GNVNVYDISQP 335 (361)
T ss_dssp -SCEEEEECSSS
T ss_pred -CeEEEEECCCC
Confidence 99999998876
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=6.4e-15 Score=162.88 Aligned_cols=269 Identities=10% Similarity=0.067 Sum_probs=191.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
..|.+++|++++..++..+ .++.++.|. . .....+..+...+.+++|+++|++++++..++.|.+|+..+++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPII-SESELQTIT---A-EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCC-CGGGSCEEE---C-EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred cccceeeecCCccceeEEe-ecccCcccc---c-ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 4577888999988777664 688888883 1 2344455566778999999999988888888999999998887655
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEECC----CcEEEEEcCCCeEEEEEe--cCCCCEEEEEEccCCCEEEEEeC------
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGDD----EGIKLINTIDGSIARVLK--GHKGPVTGLAFDPNSEYLASIDS------ 165 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~D----g~I~iwd~~~~~~~~~l~--~h~~~V~~lafspdg~~Las~s~------ 165 (945)
....+...+.+++|+++|+++++...+ +.|.+||..++.....+. .+...+.+++++|+|+++++...
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 443456789999999999987777666 689999998776543333 24467999999999987776653
Q ss_pred CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECCC-CcEEEe-----e-cCCCC
Q 002266 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRDT-AEKLFS-----L-RGDHV 237 (945)
Q Consensus 166 Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~t-~~~~~~-----~-~~~h~ 237 (945)
.+.|..||..+++....... ...+..++|+|+|+.|+++ +.++.|.+||..+ +..+.. + .....
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~--------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~ 232 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPIIQN--------ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH 232 (333)
T ss_dssp CEEEEEECTTSCCEEEEEEE--------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS
T ss_pred CceEEEEeCCCCEEEEeecC--------CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC
Confidence 24566666554443222111 1235789999999866554 4578999999963 332211 1 11011
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCC-------CeeEEEEecCCCEEEEEEcCC
Q 002266 238 QPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD-------RICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 238 ~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~-------~V~~la~spdg~~Las~s~DG 300 (945)
..+..++++++|+++++...++.|.+||.. +..+....... .+.+++|+|+++.|++++.+|
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 467889999999988888888999999984 44444433222 589999999988887776653
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=5.1e-14 Score=152.20 Aligned_cols=243 Identities=13% Similarity=0.181 Sum_probs=177.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccc------ccccceEEEEEe-cCCCEEEEEEc-CCcEE
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR------HHRDGVTALALS-PNSTCLASGSI-DHSVK 86 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~------~h~~~V~~la~s-pdg~~Lasgs~-Dg~V~ 86 (945)
++...+.+++++++|..+++.. .++.|.+||.... ....+. .|...+.++++. +++.++++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~-~~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADT-NNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEG-GGTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEEC-CCCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 4557899999999998666654 7899999997632 222222 244578999995 67766666533 78999
Q ss_pred EEEcCCCeeeeeccc-CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEe--cCCCCEEEEEEccCCCEEEEE
Q 002266 87 LYKFPGGEFQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLK--GHKGPVTGLAFDPNSEYLASI 163 (945)
Q Consensus 87 iwdl~~g~~~~~l~~-~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~--~h~~~V~~lafspdg~~Las~ 163 (945)
+|+ .+++....+.. ....+..++++++|+++++...++.|.+||. ++.....+. .+...+.+++++++|+++++.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 999 56666655532 3457899999999998777777889999996 455555554 344678999999999988877
Q ss_pred eCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC-eEEEEECCCCcEEEeecCC-CCCCeE
Q 002266 164 DSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-DVVMYDRDTAEKLFSLRGD-HVQPIC 241 (945)
Q Consensus 164 s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg-~I~vwD~~t~~~~~~~~~~-h~~~I~ 241 (945)
..++.|++||. .+..+..+... .....+..++++++|+++++...++ .|.+||.. ++.+..+... ....+.
T Consensus 182 ~~~~~i~~~~~-~g~~~~~~~~~-----g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 254 (286)
T 1q7f_A 182 NRAHCVKVFNY-EGQYLRQIGGE-----GITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCF 254 (286)
T ss_dssp GGGTEEEEEET-TCCEEEEESCT-----TTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEE
T ss_pred CCCCEEEEEcC-CCCEEEEEccC-----CccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcce
Confidence 78899999997 44444444321 1124568899999999888877775 99999964 6666555431 223478
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCe
Q 002266 242 FLSWSPNGKYMATSSLDRQILIWDVGKKL 270 (945)
Q Consensus 242 ~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~ 270 (945)
.++++|+|+++++ +.++.|+||++....
T Consensus 255 ~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 255 DVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred eEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 9999999987777 579999999986543
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=6.1e-14 Score=151.56 Aligned_cols=240 Identities=13% Similarity=0.157 Sum_probs=177.1
Q ss_pred ccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeeccc------CCCCEEEEEEe-cCCCEEEEEEC-CCcEEEE
Q 002266 59 HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR------FTLPIRVLAFN-KSGSMLAAAGD-DEGIKLI 130 (945)
Q Consensus 59 ~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~------~~~~V~~l~fs-pdg~~Lasgs~-Dg~I~iw 130 (945)
++-..+.++++++++.++++...++.|.+|+.. ++....+.. +...+..+++. +++.++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999988888888999999976 555544432 23468899995 66665555533 7899999
Q ss_pred EcCCCeEEEEEec-CCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE
Q 002266 131 NTIDGSIARVLKG-HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL 209 (945)
Q Consensus 131 d~~~~~~~~~l~~-h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L 209 (945)
| .++..+..+.. +...+.+++++|+|+++++...++.|.+||.. ++.+..+... .....+..++++++|+++
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~-----~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS-----KHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT-----TTCSSEEEEEECSSSEEE
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCC-----CccCCcEEEEECCCCCEE
Confidence 9 56766666643 34678999999999988887778999999964 4444444211 122457889999999977
Q ss_pred EEEeCCCeEEEEECCCCcEEEeecCC-CCCCeEEEEEcCCCCEEEEEECCC-eEEEEECCCCeeeeec-cC--CCCeeEE
Q 002266 210 AVPGLKNDVVMYDRDTAEKLFSLRGD-HVQPICFLSWSPNGKYMATSSLDR-QILIWDVGKKLDIDRQ-KF--DDRICCM 284 (945)
Q Consensus 210 a~gs~dg~I~vwD~~t~~~~~~~~~~-h~~~I~~l~fSpdg~~Lasgs~Dg-~I~IWD~~~~~~i~~~-~~--~~~V~~l 284 (945)
++...++.|++||.. ++.+..+... +...+..++++++|+++++...++ .|.+||... ..+... .+ ...+.++
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEEcccCCCCcceeE
Confidence 777778999999984 5556566431 235789999999999888888776 999999654 444332 22 2347899
Q ss_pred EEecCCCEEEEEEcCCeEEEEecCC
Q 002266 285 AWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 285 a~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
+++|+|+++++ +.++.|++|+...
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EECCCCcEEEE-CCCCeEEEEEccc
Confidence 99999976665 6899999998753
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=1.5e-14 Score=160.56 Aligned_cols=246 Identities=13% Similarity=0.083 Sum_probs=185.6
Q ss_pred ccceEEEEEecCCCEEEEEEcC------------------------CcEEEEEcCCCeeeeecc-cCCCCEEEEEEecCC
Q 002266 61 RDGVTALALSPNSTCLASGSID------------------------HSVKLYKFPGGEFQTNIT-RFTLPIRVLAFNKSG 115 (945)
Q Consensus 61 ~~~V~~la~spdg~~Lasgs~D------------------------g~V~iwdl~~g~~~~~l~-~~~~~V~~l~fspdg 115 (945)
-+.+.+|+++|+|+++++...+ +.|.+||..+++....+. .+-.....++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999998887766 479999998888765544 233578999999999
Q ss_pred CEEEEEECCCcEEEEEcCCCe-EEEEE---------ecCCCCEEEEEEcc-CCCEEEEEe-CCCcEEEEEccCCeeeeee
Q 002266 116 SMLAAAGDDEGIKLINTIDGS-IARVL---------KGHKGPVTGLAFDP-NSEYLASID-SIGTVIYWELQSGRELHNL 183 (945)
Q Consensus 116 ~~Lasgs~Dg~I~iwd~~~~~-~~~~l---------~~h~~~V~~lafsp-dg~~Las~s-~Dg~I~iwDl~t~~~i~~~ 183 (945)
+++++...++.|++|+..... .+..+ ..+.....+|+++| ++.++++.+ .++.|++|+ .++..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888888999999985442 44454 23445789999999 788888776 689999999 566666555
Q ss_pred cccCCCC---CCCCCCceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEeecC-CCCCCeEEEEEcCCCCEEEEE---
Q 002266 184 KRVAPDI---GSDPSSMNVLSWSPD-GETLAVPGLKNDVVMYDRDTAEKLFSLRG-DHVQPICFLSWSPNGKYMATS--- 255 (945)
Q Consensus 184 ~~~~~~~---~~~~~~i~~l~~spd-g~~La~gs~dg~I~vwD~~t~~~~~~~~~-~h~~~I~~l~fSpdg~~Lasg--- 255 (945)
....... .........++++|+ |.++++...++.|++||..+++.+..+.. .+...+..++|+| |..+++.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 3221100 011234688999998 67777777788999999998888877743 2556788999999 4333333
Q ss_pred ----ECCCeEEEEECCCCeeeeec----cCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 256 ----SLDRQILIWDVGKKLDIDRQ----KFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 256 ----s~Dg~I~IWD~~~~~~i~~~----~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
..+..|++|++.+++.+... .+...+.+++++|+|..+++...++.|++|++.
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 33458999999999888775 345668999999999777778889999999875
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=8.7e-15 Score=177.96 Aligned_cols=246 Identities=13% Similarity=0.105 Sum_probs=168.4
Q ss_pred EEEEC--CCCCE-EEEEEcCCCeEEEEcCC--C-Cccccccccc-----cccceEEEEEecCCCEEEEEEcC--------
Q 002266 22 SILWD--QQAHH-LVTASSSETTISIHDPL--L-PSNLPKILRH-----HRDGVTALALSPNSTCLASGSID-------- 82 (945)
Q Consensus 22 svafs--pdg~~-L~t~g~~dg~V~IWd~~--~-~~~~~~~l~~-----h~~~V~~la~spdg~~Lasgs~D-------- 82 (945)
..+|+ |||+. |+.++..+..|++|+.. . + ....+.. |...+.+++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~--~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA--VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC--CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC--CCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 44455 99999 88776456778888765 2 2 2334444 66788999999999999998876
Q ss_pred --CcEEEEEcCC------Ceeeeecc-cCCCCEEEEEEecCCCEEEEEECCC--------cEEEEEcC-CC---eEEEEE
Q 002266 83 --HSVKLYKFPG------GEFQTNIT-RFTLPIRVLAFNKSGSMLAAAGDDE--------GIKLINTI-DG---SIARVL 141 (945)
Q Consensus 83 --g~V~iwdl~~------g~~~~~l~-~~~~~V~~l~fspdg~~Lasgs~Dg--------~I~iwd~~-~~---~~~~~l 141 (945)
..|++|++.+ ++. ..+. .+...+..++|+|||++|+.++.++ .|++||+. ++ ......
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred ceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 5899999987 554 3444 5556788899999999999887553 79999998 56 444444
Q ss_pred ecCCCCEEEEEEccCCCEEEEEeCCC--cEEEEEccCCeeeeeecccCCCCCCC--CCCceEEEEcCCCCEEEEEeCCCe
Q 002266 142 KGHKGPVTGLAFDPNSEYLASIDSIG--TVIYWELQSGRELHNLKRVAPDIGSD--PSSMNVLSWSPDGETLAVPGLKND 217 (945)
Q Consensus 142 ~~h~~~V~~lafspdg~~Las~s~Dg--~I~iwDl~t~~~i~~~~~~~~~~~~~--~~~i~~l~~spdg~~La~gs~dg~ 217 (945)
..|...+..++|+|+|++++++..++ .|.+||+.+++........ ...... ...+..++|+|+++++++++. +.
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~ 315 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE-EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA 315 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS-SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS
T ss_pred CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc-ccccCccccccCceEeEeCCCEEEEEEEc-Cc
Confidence 55678999999999999888888888 5666666566543322211 111000 011456899999999999988 88
Q ss_pred EEEE--ECCCCcEEEeecCCCCCCeEEE-EEcCCCCEEEEEECCC--eEEEEECCCCeeeee
Q 002266 218 VVMY--DRDTAEKLFSLRGDHVQPICFL-SWSPNGKYMATSSLDR--QILIWDVGKKLDIDR 274 (945)
Q Consensus 218 I~vw--D~~t~~~~~~~~~~h~~~I~~l-~fSpdg~~Lasgs~Dg--~I~IWD~~~~~~i~~ 274 (945)
++|| |+.+++ +..+.. +...+..+ +++.+.-++++++.+. .|++||+.+++....
T Consensus 316 ~~l~~~d~~~~~-~~~l~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 316 AVLGILDPESGE-LVDAAG-PWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp CEEEEEETTTTE-EEECCS-SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred cEEEEEECCCCc-EEEecC-CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 8888 665554 556654 55667666 4443333444555554 566667777765544
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.65 E-value=8.5e-13 Score=142.46 Aligned_cols=278 Identities=11% Similarity=-0.003 Sum_probs=195.9
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCee
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~ 95 (945)
+...+.+++++++|..+++.. .++.|.+||.. +.........+...+.+++++++|.++++...++.|..|+.. ++.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~-~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQH-KANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEET-TTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cCCCccceEECCCCCEEEEec-CCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE
Confidence 346799999999999776653 57899999976 322111222345679999999999888876667889999975 443
Q ss_pred ee-ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEE-EecCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 002266 96 QT-NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV-LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173 (945)
Q Consensus 96 ~~-~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~-l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwD 173 (945)
.. .+......+..+++.++|.++++...++.|.+||. ++..... ...+...+.+++++++|.++++...++.|.+||
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 22 12223457899999999988777777889999998 5554332 233456789999999998887777778999999
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEE
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~La 253 (945)
. +++... +.. . .....+..++++++|+++++...++.|.+||. +++........+...+..++++++|++++
T Consensus 169 ~-~g~~~~-~~~--~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 169 E-SGDITE-FKI--P---TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWF 240 (299)
T ss_dssp T-TCCEEE-EEC--S---STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred C-CCcEEE-eeC--C---CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEE
Confidence 8 655432 211 1 12245678999999997776666889999999 66543321222456789999999999777
Q ss_pred EEECCCeEEEEECCCCeeeee--ccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 254 TSSLDRQILIWDVGKKLDIDR--QKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 254 sgs~Dg~I~IWD~~~~~~i~~--~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
+...++.|.+||. ++..... ......+.++++ ++++.+++.. .+.|..++..
T Consensus 241 ~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 241 TEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp EETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC
T ss_pred eccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcC
Confidence 7667889999998 4443322 223457899999 8887655544 5667777654
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=3e-15 Score=168.74 Aligned_cols=236 Identities=8% Similarity=-0.035 Sum_probs=164.9
Q ss_pred eEEEEEecCCCEEEEEEcC---CcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEE
Q 002266 64 VTALALSPNSTCLASGSID---HSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV 140 (945)
Q Consensus 64 V~~la~spdg~~Lasgs~D---g~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~ 140 (945)
+.+++|+|||++|+.+... ..|.+|++.+++..............+.|+|+|++|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 6778999999998877543 3688889988875544332222233478999999999999999999999988876655
Q ss_pred EecCCCCEEE-------------------EEEccCCCEEEEE-----eCCCcEEEEEccCCeeeeeecccCCCCCCCCCC
Q 002266 141 LKGHKGPVTG-------------------LAFDPNSEYLASI-----DSIGTVIYWELQSGRELHNLKRVAPDIGSDPSS 196 (945)
Q Consensus 141 l~~h~~~V~~-------------------lafspdg~~Las~-----s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~ 196 (945)
...+...... +.|+|+++.++.+ ..+..|++||+.+++...... +...
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~--------~~~~ 189 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ--------DTAW 189 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE--------ESSC
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc--------CCcc
Confidence 5544443323 3457777766544 355689999998876544332 1245
Q ss_pred ceEEEEcC-CCCEEEEEeCC------CeEEEEECCCCcEEEeecCCC-CCCeEEEEEcCCCCEEEEEECC-----CeEEE
Q 002266 197 MNVLSWSP-DGETLAVPGLK------NDVVMYDRDTAEKLFSLRGDH-VQPICFLSWSPNGKYMATSSLD-----RQILI 263 (945)
Q Consensus 197 i~~l~~sp-dg~~La~gs~d------g~I~vwD~~t~~~~~~~~~~h-~~~I~~l~fSpdg~~Lasgs~D-----g~I~I 263 (945)
+..+.|+| +|+.|+..+.+ ..|.+||+..++.. .+.... ...+..++|+|+|++|+.++.+ +.|++
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 67899999 88877776543 46899998765533 332212 2357889999999988877644 45999
Q ss_pred EECCCCeeeeeccCCCCeeEEEEec-CCCEEEEEE----------------cCCeEEEEecCCC
Q 002266 264 WDVGKKLDIDRQKFDDRICCMAWKP-IGNALAVID----------------VMGKYGVWESVVP 310 (945)
Q Consensus 264 WD~~~~~~i~~~~~~~~V~~la~sp-dg~~Las~s----------------~DG~I~iWd~~~~ 310 (945)
||+.++.......... .. +.|+| +|+.|++++ .++.|++|++..+
T Consensus 269 ~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 269 ANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp ECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 9998886654433322 33 89999 999888765 3467889987543
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.61 E-value=1.8e-13 Score=148.85 Aligned_cols=238 Identities=13% Similarity=0.064 Sum_probs=170.2
Q ss_pred ccccccccceEEEEEecCCC-EEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC
Q 002266 55 KILRHHRDGVTALALSPNST-CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI 133 (945)
Q Consensus 55 ~~l~~h~~~V~~la~spdg~-~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~ 133 (945)
..+..+.....+++|+|+|+ +++++..++.|.+|+..++ ...+..+...+.+++++++|+++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34444556678999999998 7777788899999998876 45555567789999999999987777667899999998
Q ss_pred CCeEEEEEecC----CCCEEEEEEccCCCEEEEEeC-----------------CCcEEEEEccCCeeeeeecccCCCCCC
Q 002266 134 DGSIARVLKGH----KGPVTGLAFDPNSEYLASIDS-----------------IGTVIYWELQSGRELHNLKRVAPDIGS 192 (945)
Q Consensus 134 ~~~~~~~l~~h----~~~V~~lafspdg~~Las~s~-----------------Dg~I~iwDl~t~~~i~~~~~~~~~~~~ 192 (945)
+++........ ...+.+++++|+|+++++.+. .+.|..++.. ++. ..+. .
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~-------~ 169 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPI-------R 169 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEE-------C
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEee-------c
Confidence 88754433221 235678999999998887321 2455555544 332 2221 1
Q ss_pred CCCCceEEEEcCCCCEEEEEeCCCeEEEEECC-CCcE---EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 193 DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRD-TAEK---LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 193 ~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~-t~~~---~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
.....+.++|+|+|+.+++.+.++.|++|++. ++.. ...+ ..+...+..++++++|+++++. ++.|.+||..
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 22445789999999999777778899999986 4544 3334 3355667789999999877666 7899999987
Q ss_pred CeeeeeccCCCCeeEEEE-ecCCCEEEEEEcCCeEEEEecC
Q 002266 269 KLDIDRQKFDDRICCMAW-KPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 269 ~~~i~~~~~~~~V~~la~-spdg~~Las~s~DG~I~iWd~~ 308 (945)
++.+........+++++| .|+++.|++++.+| |..++..
T Consensus 246 g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 246 GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIETN 285 (296)
T ss_dssp SCEEEEEECSSCCCEEEEESTTSCEEEEEETTE-EEEEECS
T ss_pred CCEEEEEECCCCceeEEEECCCCCEEEEEcCCe-EEEEEcc
Confidence 555555443333999999 58889999888764 4444443
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=1.8e-13 Score=168.35 Aligned_cols=276 Identities=9% Similarity=0.049 Sum_probs=187.4
Q ss_pred CCCCEEEEEEcCCC----eEEEEcCCCCcccc-----ccccccccceEEEEEecCCCEEEEEEcCC-----cEEEEEcCC
Q 002266 27 QQAHHLVTASSSET----TISIHDPLLPSNLP-----KILRHHRDGVTALALSPNSTCLASGSIDH-----SVKLYKFPG 92 (945)
Q Consensus 27 pdg~~L~t~g~~dg----~V~IWd~~~~~~~~-----~~l~~h~~~V~~la~spdg~~Lasgs~Dg-----~V~iwdl~~ 92 (945)
|+|++++......+ .+.+.+...+.... ..-.+|...+..++|||||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 89999887753322 44555543332110 11123445688999999999999876543 899999999
Q ss_pred CeeeeecccCCCCEEEEEEecCCCEEEEEECCCc----------------EEEEEcCCCeE--EEEEe--cCCCCEEEEE
Q 002266 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEG----------------IKLINTIDGSI--ARVLK--GHKGPVTGLA 152 (945)
Q Consensus 93 g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~----------------I~iwd~~~~~~--~~~l~--~h~~~V~~la 152 (945)
++....... ...+..++|+|||+.|+.++.++. |++|++.++.. ...+. .|...+.++.
T Consensus 161 g~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 987653222 223667999999999999988766 99999987752 22223 3456688999
Q ss_pred EccCCCEEEEEeC-----CCcEEEEEccC------Ce-eeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC----C
Q 002266 153 FDPNSEYLASIDS-----IGTVIYWELQS------GR-ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK----N 216 (945)
Q Consensus 153 fspdg~~Las~s~-----Dg~I~iwDl~t------~~-~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d----g 216 (945)
|+|+|++|+.++. +..|++||+.+ +. ....+... ...+. ..|+|+|+.|++.+.. +
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~-------~~~~~-~~~s~dg~~l~~~s~~~~~~~ 311 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN-------FEGEY-DYVTNEGTVFTFKTNRHSPNY 311 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS-------SSSCE-EEEEEETTEEEEEECTTCTTC
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC-------CCcEE-EEEeccCCEEEEEECCCCCCC
Confidence 9999999887765 56899999986 42 23333221 12222 3588999988877653 3
Q ss_pred eEEEEECCCCcE--EEeecCCCC-CCeEEEEEcCCCCEEEEEECCCe--EEEEECCCCeeeeecc-CCCCeeEEEEecCC
Q 002266 217 DVVMYDRDTAEK--LFSLRGDHV-QPICFLSWSPNGKYMATSSLDRQ--ILIWDVGKKLDIDRQK-FDDRICCMAWKPIG 290 (945)
Q Consensus 217 ~I~vwD~~t~~~--~~~~~~~h~-~~I~~l~fSpdg~~Lasgs~Dg~--I~IWD~~~~~~i~~~~-~~~~V~~la~spdg 290 (945)
.|.+||+.++.. ...+...+. ..+..++|++++.++++...++. |++|++.++..+.... +...+..++++|++
T Consensus 312 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 312 RLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKD 391 (710)
T ss_dssp EEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTC
T ss_pred EEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCC
Confidence 699999987641 233333222 36888999988888888888884 6677876666544433 35668889999998
Q ss_pred CEEEEEE----cCCeEEEEecCCCC
Q 002266 291 NALAVID----VMGKYGVWESVVPS 311 (945)
Q Consensus 291 ~~Las~s----~DG~I~iWd~~~~~ 311 (945)
..|+... ..+.|++||+..+.
T Consensus 392 ~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 392 TEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp SEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8666442 34789999986543
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.60 E-value=1.9e-13 Score=148.73 Aligned_cols=240 Identities=13% Similarity=0.085 Sum_probs=173.5
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCee
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~ 95 (945)
+.....+++|+|+|+.|+.++..++.|.+|+...+ ...+..+...+.+++++++|+++++...++.|.+|+..+++.
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 34668899999999955555558899999998764 344555677899999999999887766678999999878775
Q ss_pred eeecccC----CCCEEEEEEecCCCEEEEE----E-------------CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEc
Q 002266 96 QTNITRF----TLPIRVLAFNKSGSMLAAA----G-------------DDEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154 (945)
Q Consensus 96 ~~~l~~~----~~~V~~l~fspdg~~Lasg----s-------------~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafs 154 (945)
....... ...+..++++|+|+++++. + ..+.|..++.. +. ...+..+......++|+
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEEC
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEEC
Confidence 4433221 2346689999999988873 2 13456666654 44 34455566778999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcc-CCee---eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Q 002266 155 PNSEYLASIDSIGTVIYWELQ-SGRE---LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230 (945)
Q Consensus 155 pdg~~Las~s~Dg~I~iwDl~-t~~~---i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~ 230 (945)
|+++.|++.+.++.|.+|++. ++.. ...+ . .....+..++++++|+++++. ++.|.+||.. ++.+.
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~------~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T------VEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C------CSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEE
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e------CCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEE
Confidence 999988777778899999997 4443 2222 1 122345669999999866555 8899999987 77776
Q ss_pred eecCCCCCCeEEEEE-cCCCCEEEEEECCCeEEEEECCCCeeee
Q 002266 231 SLRGDHVQPICFLSW-SPNGKYMATSSLDRQILIWDVGKKLDID 273 (945)
Q Consensus 231 ~~~~~h~~~I~~l~f-Spdg~~Lasgs~Dg~I~IWD~~~~~~i~ 273 (945)
.+.. +.. +++++| +|+++.|++++.+ .|.-++..+..+..
T Consensus 251 ~~~~-~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 251 RVLT-PQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp EEEC-SSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCCC
T ss_pred EEEC-CCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccccc
Confidence 6665 444 899999 5899999888865 46666776665543
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=1.8e-13 Score=168.19 Aligned_cols=247 Identities=9% Similarity=-0.016 Sum_probs=176.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCC----eEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCc------
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSET----TISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHS------ 84 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg----~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~------ 84 (945)
+|...+.+++|||||++|+.+.+..| .|++||+.++......+.. ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCccccccc
Confidence 34456889999999999998864444 8999999877433322222 23678999999999999888765
Q ss_pred ----------EEEEEcCCCeee----eecccCCCCEEEEEEecCCCEEEEEEC-----CCcEEEEEcCC------Ce-EE
Q 002266 85 ----------VKLYKFPGGEFQ----TNITRFTLPIRVLAFNKSGSMLAAAGD-----DEGIKLINTID------GS-IA 138 (945)
Q Consensus 85 ----------V~iwdl~~g~~~----~~l~~~~~~V~~l~fspdg~~Lasgs~-----Dg~I~iwd~~~------~~-~~ 138 (945)
|++|++.+++.. .....+...+..+.|+|||++|+.++. +..|++||+.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 999999877522 122223456789999999999998875 56799999976 43 35
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEEeCC----CcEEEEEccCCee--eeeecccCCCCCCCCCCceEEEEcCCCCEEEEE
Q 002266 139 RVLKGHKGPVTGLAFDPNSEYLASIDSI----GTVIYWELQSGRE--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212 (945)
Q Consensus 139 ~~l~~h~~~V~~lafspdg~~Las~s~D----g~I~iwDl~t~~~--i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g 212 (945)
..+..+...+.. .|+|+|..|+..+.. +.|.+||+.++.. ...+... .....+..++|++++.++++.
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE-----HEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-----CSSCEEEEEEEETTTEEEEEE
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC-----CCCCeEEEEEEEcCCEEEEEE
Confidence 566666666655 488999887766553 3699999987641 2222211 111356778998777778888
Q ss_pred eCCC--eEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEE-E---CCCeEEEEECCCCe
Q 002266 213 GLKN--DVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATS-S---LDRQILIWDVGKKL 270 (945)
Q Consensus 213 s~dg--~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasg-s---~Dg~I~IWD~~~~~ 270 (945)
..++ .|++|++.+++.+..+.. +...+..++++|++..|+.. + ..+.|++||+.+++
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPL-EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECC-CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCEEEEEEEECCCCCEEEecCC-CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 7777 467778877877777765 56778889999998766543 2 24789999998766
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=9e-13 Score=146.32 Aligned_cols=258 Identities=11% Similarity=-0.000 Sum_probs=185.3
Q ss_pred CCCeEEEEcCCCCcccccccc-----ccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEe
Q 002266 38 SETTISIHDPLLPSNLPKILR-----HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFN 112 (945)
Q Consensus 38 ~dg~V~IWd~~~~~~~~~~l~-----~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fs 112 (945)
.++.|.+||..++........ ........+++. +++++++...++.|.+||..+++.+..+. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 378999999887643222211 112346778774 34455555567999999999999887775 34678899999
Q ss_pred cCCCEEEEEE-CCCcEEEEEcCCCeEEEEEecCC-----CCEEEEEEccCCCEEEEEe--CCCcEEEEEccCCeeeeeec
Q 002266 113 KSGSMLAAAG-DDEGIKLINTIDGSIARVLKGHK-----GPVTGLAFDPNSEYLASID--SIGTVIYWELQSGRELHNLK 184 (945)
Q Consensus 113 pdg~~Lasgs-~Dg~I~iwd~~~~~~~~~l~~h~-----~~V~~lafspdg~~Las~s--~Dg~I~iwDl~t~~~i~~~~ 184 (945)
++++ +.++. .++.|.+||+.+++....+.... .....+++ . +..|+++. .++.|.+||+.+++.+..+.
T Consensus 93 ~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 93 SDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp ETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred CCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 9984 55554 78999999999998877776433 14556777 3 44555554 48899999999998877664
Q ss_pred ccCCCCCCCCCCceEEEEcCCCCEEEEEeCC----------CeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEE
Q 002266 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGLK----------NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254 (945)
Q Consensus 185 ~~~~~~~~~~~~i~~l~~spdg~~La~gs~d----------g~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Las 254 (945)
.. .....++++|+|++++++..+ +.|.+||..+++....+..........++|+|++++|++
T Consensus 170 ~g--------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 170 IG--------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp CS--------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred cC--------CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 31 123568899999977776544 789999999988776664322347899999999999888
Q ss_pred EECCCeEEEEECCCCeeeee--ccC-CCCeeEEEEecCC-CEEEEE----EcCCeEEEEecCCCC
Q 002266 255 SSLDRQILIWDVGKKLDIDR--QKF-DDRICCMAWKPIG-NALAVI----DVMGKYGVWESVVPS 311 (945)
Q Consensus 255 gs~Dg~I~IWD~~~~~~i~~--~~~-~~~V~~la~spdg-~~Las~----s~DG~I~iWd~~~~~ 311 (945)
+.. .|.+||..+++.... ... .....+++++|++ ..+++. ..++.|.+|+.. +.
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 754 899999998876432 121 3578999999954 444554 468899999976 44
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.57 E-value=2.6e-13 Score=150.61 Aligned_cols=228 Identities=7% Similarity=-0.010 Sum_probs=154.7
Q ss_pred CEEEEEECCCCCEEEEEEcCC--C--eEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcC------------
Q 002266 19 SFCSILWDQQAHHLVTASSSE--T--TISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSID------------ 82 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~d--g--~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~D------------ 82 (945)
.+.+++|||||++|++++... + .|++|++.++ ... .+..+.. +..++|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-~~~-~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-SSK-KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT-EEE-EEEEESE-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC-ceE-EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 467889999999999886332 3 4777787654 222 2333334 9999999999999887642
Q ss_pred ---------------CcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCC-------cEEEEEcCCCeEEEE
Q 002266 83 ---------------HSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE-------GIKLINTIDGSIARV 140 (945)
Q Consensus 83 ---------------g~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg-------~I~iwd~~~~~~~~~ 140 (945)
..|++|++.+++....+.. . .+..+.|+|+| +++++..+. ...||.+.+++. ..
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~ 212 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EK 212 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EE
Confidence 5799999988886344444 3 78899999999 777776542 334444435543 34
Q ss_pred EecCCCCEEEEEEccCCCEEEEEeCC--------CcEEEEEccCCeeeeeecccCCCCCCCCCCceE-EEEcCCCCEEEE
Q 002266 141 LKGHKGPVTGLAFDPNSEYLASIDSI--------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNV-LSWSPDGETLAV 211 (945)
Q Consensus 141 l~~h~~~V~~lafspdg~~Las~s~D--------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~-l~~spdg~~La~ 211 (945)
+..+ ..+..+ +|+|++|+.++.+ ..|.+|| +++...... .+...+.. +.|+ +| ++++
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~-------~~~~~~~~~~~~s-dg-~~~~ 278 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD-------EVDRGVGQAKIKD-GK-VYFT 278 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST-------TCCSEEEEEEEET-TE-EEEE
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc-------cCCcccCCccEEc-Cc-EEEE
Confidence 4444 555554 9999988877654 3677777 444322111 22345665 8999 88 8888
Q ss_pred EeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeE-EEEECCCCeeee
Q 002266 212 PGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQI-LIWDVGKKLDID 273 (945)
Q Consensus 212 gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I-~IWD~~~~~~i~ 273 (945)
++.++.+++| +.+++....+ . +...|.+++|+| .++++++.++.. .||.+. ++...
T Consensus 279 ~~~~~~~~l~-~~~g~~~~~~-~-~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~~~ 335 (347)
T 2gop_A 279 LFEEGSVNLY-IWDGEIKPIA-K-GRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEEKQ 335 (347)
T ss_dssp EEETTEEEEE-EESSSEEEEE-C-SSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSEEE
T ss_pred EecCCcEEEE-EcCCceEEEe-c-CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcEEE
Confidence 8899999999 8766554333 3 467899999999 677777766654 677665 54433
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=3.8e-13 Score=143.55 Aligned_cols=243 Identities=10% Similarity=-0.018 Sum_probs=171.4
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeee
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTN 98 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~ 98 (945)
...+++++++|+.++++...++.|.+|+...... ......+...+.+++++++|+++++.. ++.|.+|+.........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc-ceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 6889999999985552534788999999754421 111123335678999999998666654 88999999866543322
Q ss_pred cccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCe
Q 002266 99 ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR 178 (945)
Q Consensus 99 l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~ 178 (945)
.......+..+++.++|+++++...++.|.+|+..+.............+.+++++++|+++++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 22223568999999999977777778889999765544332222333467899999999977777778899999987665
Q ss_pred eeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECC
Q 002266 179 ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258 (945)
Q Consensus 179 ~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D 258 (945)
...... .....+..++++++|.++++...++.|.+|+........ ....+...+..++++++|+++++...+
T Consensus 183 ~~~~~~-------~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 183 QVVLPF-------TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp EEECCC-------SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred eEeecc-------cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccCCCCCceeEEECCCCCEEEEECCC
Confidence 432211 112456889999999777776678899999997654433 322234678999999999988888889
Q ss_pred CeEEEEECCCCee
Q 002266 259 RQILIWDVGKKLD 271 (945)
Q Consensus 259 g~I~IWD~~~~~~ 271 (945)
+.|++|++...+.
T Consensus 255 ~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 255 DRVVKLTSLEHHH 267 (270)
T ss_dssp TEEEEECCCGGGS
T ss_pred CEEEEEcCCCccc
Confidence 9999999876543
No 187
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=3.9e-12 Score=143.97 Aligned_cols=281 Identities=7% Similarity=-0.066 Sum_probs=193.9
Q ss_pred EEECCCCCEEEEEEc-CCC---eEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE----------cCCcEEEE
Q 002266 23 ILWDQQAHHLVTASS-SET---TISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS----------IDHSVKLY 88 (945)
Q Consensus 23 vafspdg~~L~t~g~-~dg---~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs----------~Dg~V~iw 88 (945)
+...|++++++++.. ... .|.+||..+.. ....+.....+ .++++|||++|+++. .++.|.+|
T Consensus 26 ~~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~-~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 26 EAPGADGRRSYINLPAHHSAIIQQWVLDAGSGS-ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred ccCCCCCCEEEEeCCcccCCccEEEEEECCCCe-EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEE
Confidence 345688988887753 233 88999988764 33444433333 999999999999876 36789999
Q ss_pred EcCCCeeeeecccC-------CCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEE-EecCCCCEEEEEEccCC-
Q 002266 89 KFPGGEFQTNITRF-------TLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARV-LKGHKGPVTGLAFDPNS- 157 (945)
Q Consensus 89 dl~~g~~~~~l~~~-------~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~-l~~h~~~V~~lafspdg- 157 (945)
|..+++.+..+.-. ......++|+|||++|+++.. ++.|.++| .+++.+.. +.. .. ++.+.|++
T Consensus 103 D~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~ 177 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAP 177 (373)
T ss_pred ECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCC
Confidence 99888776655322 123468999999999999874 47899999 99988777 542 22 24455655
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCC-ceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE--EEeecC
Q 002266 158 EYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSS-MNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK--LFSLRG 234 (945)
Q Consensus 158 ~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~-i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~--~~~~~~ 234 (945)
..+++.+.||.+.++|. +++........ ... ....+ .....+.+++..++..+..+.+.++|+.+... +..+..
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~-~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVG-AML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEecc-ccc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeee
Confidence 45566778999999999 87765332210 000 11111 12355667665555555788999999975532 222210
Q ss_pred ---------CCCCCeEEEEEcCCCCEEEEEEC----------CCeEEEEECCCCeeeeeccCCCCeeEEEEecCCC-EEE
Q 002266 235 ---------DHVQPICFLSWSPNGKYMATSSL----------DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN-ALA 294 (945)
Q Consensus 235 ---------~h~~~I~~l~fSpdg~~Lasgs~----------Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~-~La 294 (945)
........+.++|+++.++.+.. .+.|.++|+.+++.+..+.......+++|+|||+ .|+
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLY 334 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEE
Confidence 01223445789999988777653 3579999999999998887777899999999999 777
Q ss_pred EEE-cCCeEEEEecCCCCCCC
Q 002266 295 VID-VMGKYGVWESVVPSSMK 314 (945)
Q Consensus 295 s~s-~DG~I~iWd~~~~~~~~ 314 (945)
++. .++.|.+||....+.+.
T Consensus 335 v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 335 ALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred EEcCCCCeEEEEECCCCCEEe
Confidence 776 58999999998766543
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.56 E-value=5.6e-14 Score=172.38 Aligned_cols=272 Identities=8% Similarity=-0.046 Sum_probs=178.5
Q ss_pred CCCCCEEEEEEcCCC----eEEEEcCCCCccccccc------cccccceEEEEEecCCCEEEEE-----EcCCcEEEEEc
Q 002266 26 DQQAHHLVTASSSET----TISIHDPLLPSNLPKIL------RHHRDGVTALALSPNSTCLASG-----SIDHSVKLYKF 90 (945)
Q Consensus 26 spdg~~L~t~g~~dg----~V~IWd~~~~~~~~~~l------~~h~~~V~~la~spdg~~Lasg-----s~Dg~V~iwdl 90 (945)
+|+|++++......+ .|++.+...+ .....+ .+|...+.+++|||||++||.+ +.+..|++||+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESG-QEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTS-CCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCC-CcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 479999888763332 3444444332 212222 2355578999999999999844 33468999999
Q ss_pred CCCeee-eecccCCCCEEEEEEecCCCEEEEEECCCc-------------EEEEEcCCCe----EEEEEecCCCCEEEEE
Q 002266 91 PGGEFQ-TNITRFTLPIRVLAFNKSGSMLAAAGDDEG-------------IKLINTIDGS----IARVLKGHKGPVTGLA 152 (945)
Q Consensus 91 ~~g~~~-~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~-------------I~iwd~~~~~----~~~~l~~h~~~V~~la 152 (945)
.+++.. .... .......++|+|||+.|+.++.+.. |++|++.++. .+.....|...+.++.
T Consensus 155 ~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 155 DSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 998764 2111 1111267899999999999998776 9999998875 2333334556889999
Q ss_pred EccCCCEEEEEeCCC----cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC----CCeEEEEECC
Q 002266 153 FDPNSEYLASIDSIG----TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL----KNDVVMYDRD 224 (945)
Q Consensus 153 fspdg~~Las~s~Dg----~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~----dg~I~vwD~~ 224 (945)
|+|+|++|+.++.++ .|++|+..++.. ..+.. +...+....| ++|. |++.+. ++.|.+||+.
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~-------~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVK-------GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEE-------CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTT
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeec-------CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCC
Confidence 999999988877665 677776544432 22221 1123345556 5666 555443 5789999998
Q ss_pred CCcE---EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC-CCeeeeeccC--CCCeeEEEEecCCCEEEEEE-
Q 002266 225 TAEK---LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQKF--DDRICCMAWKPIGNALAVID- 297 (945)
Q Consensus 225 t~~~---~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~-~~~~i~~~~~--~~~V~~la~spdg~~Las~s- 297 (945)
++.. ...+.......+..++|+ ++.++++...|+..+||.+. ++........ ...+..++++|++..|+...
T Consensus 304 ~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 304 KPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp BCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred CCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 7652 223332124567888998 77788888889988887654 3443333332 45678889999998776433
Q ss_pred ---cCCeEEEEecCCC
Q 002266 298 ---VMGKYGVWESVVP 310 (945)
Q Consensus 298 ---~DG~I~iWd~~~~ 310 (945)
..+.|++||+..+
T Consensus 383 s~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 383 SFTTPRQIYKTSVSTG 398 (695)
T ss_dssp ETTEEEEEEEEETTTC
T ss_pred CCCCCCEEEEEECCCC
Confidence 3478999998654
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.56 E-value=4.8e-13 Score=142.79 Aligned_cols=240 Identities=9% Similarity=-0.032 Sum_probs=170.0
Q ss_pred ceEEEEEecCCCEEE-EEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE
Q 002266 63 GVTALALSPNSTCLA-SGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141 (945)
Q Consensus 63 ~V~~la~spdg~~La-sgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l 141 (945)
...+++++++|++++ +...++.|.+|+..++............+.++++.++|+++++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678999999998777 446778999998765543322222334678899999998555554 889999998665433222
Q ss_pred ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEE
Q 002266 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221 (945)
Q Consensus 142 ~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vw 221 (945)
......+.+++++++|+++++...++.|.+|+..+........ .....+..++++++|+++++...++.|.+|
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-------TGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-------CSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-------ccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 2233678999999999977777778899999765443221110 112345679999999977776667899999
Q ss_pred ECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec-cCCCCeeEEEEecCCCEEEEEEcCC
Q 002266 222 DRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ-KFDDRICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 222 D~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~-~~~~~V~~la~spdg~~Las~s~DG 300 (945)
|............ +...+..++++++|.++++...++.|.+|+.......... .....+.+++++++|+.+++...++
T Consensus 177 ~~~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 177 EAESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp CTTTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred ecCCCceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 9987665443322 3367889999999987777777889999999776544332 2235689999999999888888899
Q ss_pred eEEEEecCCCC
Q 002266 301 KYGVWESVVPS 311 (945)
Q Consensus 301 ~I~iWd~~~~~ 311 (945)
.|.+|+...+.
T Consensus 256 ~v~~~~~~~~~ 266 (270)
T 1rwi_B 256 RVVKLTSLEHH 266 (270)
T ss_dssp EEEEECCCGGG
T ss_pred EEEEEcCCCcc
Confidence 99999876543
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=8.7e-12 Score=148.49 Aligned_cols=288 Identities=9% Similarity=0.041 Sum_probs=202.6
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCC--CCccccccccccccceEEEEEe----cCCCEEEEEEc-CCcEEEEEc
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPL--LPSNLPKILRHHRDGVTALALS----PNSTCLASGSI-DHSVKLYKF 90 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~--~~~~~~~~l~~h~~~V~~la~s----pdg~~Lasgs~-Dg~V~iwdl 90 (945)
..+..++|+|||+++++++ .++.|.+||+. +. .....+.. ......++|+ |||+++++++. +++|.++|.
T Consensus 197 ~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~-~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKEP-TTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp SCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSC-CEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CCccceEECCCCCEEEEEc-CCCeEEEEECCCCCC-cEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 3567899999999999887 89999999985 44 33334443 2346799999 69999888765 589999999
Q ss_pred CCCeeeeecccC-----------CCCEEEEEEecCCCEEEEE-ECCCcEEEEEcCCCeEEEE-EecCCCCEEEEEEccCC
Q 002266 91 PGGEFQTNITRF-----------TLPIRVLAFNKSGSMLAAA-GDDEGIKLINTIDGSIARV-LKGHKGPVTGLAFDPNS 157 (945)
Q Consensus 91 ~~g~~~~~l~~~-----------~~~V~~l~fspdg~~Lasg-s~Dg~I~iwd~~~~~~~~~-l~~h~~~V~~lafspdg 157 (945)
.+.+.+..+... ...+..+..++++..+++. ...|.|.++|..+...... .........++.|+|+|
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 353 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCC
Confidence 988877665421 1257888889887655544 4568999999877543222 12344567889999999
Q ss_pred CEEEEEe-CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE-EEEe-CCCeEEEEECCC-------Cc
Q 002266 158 EYLASID-SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL-AVPG-LKNDVVMYDRDT-------AE 227 (945)
Q Consensus 158 ~~Las~s-~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L-a~gs-~dg~I~vwD~~t-------~~ 227 (945)
++|++++ .++.|.++|+.+++.+..+... ....|...-..+ ++|++..+ +++. .++.|.++|..+ ++
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vg--g~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~k 430 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTG--GQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWK 430 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECS--SSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTS
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecc--CcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCE
Confidence 9887665 5789999999999877666420 111222211122 58875544 4443 368999999988 78
Q ss_pred EEEeecCCCCCCeEEEEEcCCCCEEEEEEC-------CCeEEEEECCCC---------eeeeec------cCCCCeeEEE
Q 002266 228 KLFSLRGDHVQPICFLSWSPNGKYMATSSL-------DRQILIWDVGKK---------LDIDRQ------KFDDRICCMA 285 (945)
Q Consensus 228 ~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~-------Dg~I~IWD~~~~---------~~i~~~------~~~~~V~~la 285 (945)
.+.++.. ....-..+..+|++++|.+... .++|.|+|+.+. +.+... .....+..+.
T Consensus 431 vv~~i~~-~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (567)
T 1qks_A 431 ILDSFPA-LGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE 509 (567)
T ss_dssp EEEEEEC-SCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE
T ss_pred EEEEEec-CCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee
Confidence 8888775 2233344778999999998763 358999999876 222110 1245789999
Q ss_pred EecCCCEEEEEEc-----CCeEEEEecCCCCC
Q 002266 286 WKPIGNALAVIDV-----MGKYGVWESVVPSS 312 (945)
Q Consensus 286 ~spdg~~Las~s~-----DG~I~iWd~~~~~~ 312 (945)
|+|+|+.+.++.. ++.|.|+|..+...
T Consensus 510 ~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 510 FNKDGTEVWFSVWNGKDQESALVVVDDKTLEL 541 (567)
T ss_dssp ECTTSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred ECCCCCEEEEEeecCCCCCCcEEEEECCCceE
Confidence 9999998776633 79999999876553
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=1.8e-12 Score=143.03 Aligned_cols=248 Identities=10% Similarity=0.079 Sum_probs=166.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcC----CcEEEEEc
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSID----HSVKLYKF 90 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~D----g~V~iwdl 90 (945)
++...+.+++|+|+|+.++++ ..++.|.+||..++. .......+...+.+++|+++|+++++...+ +.|.+|+.
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~-~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLD-VFEGNIFKINPETKE-IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEE-TTTCEEEEECTTTCC-EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred ccCccccCcEECCCCCEEEEE-CCCCEEEEEeCCCCc-EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 344678999999999965555 478899999987653 222233456789999999999888776665 68999998
Q ss_pred CCCeeeeecc--cCCCCEEEEEEecCCCEEEEEEC------CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEE
Q 002266 91 PGGEFQTNIT--RFTLPIRVLAFNKSGSMLAAAGD------DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLAS 162 (945)
Q Consensus 91 ~~g~~~~~l~--~~~~~V~~l~fspdg~~Lasgs~------Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las 162 (945)
.++.....+. .....+.+++++|+|+++++... .+.|..|+..+++... +..+...+..++|+|++++|+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWV 198 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEE
Confidence 8776543332 23457899999999987776553 2456666665554433 3233456889999999986654
Q ss_pred E-eCCCcEEEEEccC-Ceeeeeeccc-CCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCC---
Q 002266 163 I-DSIGTVIYWELQS-GRELHNLKRV-APDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH--- 236 (945)
Q Consensus 163 ~-s~Dg~I~iwDl~t-~~~i~~~~~~-~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h--- 236 (945)
+ +.++.|.+||+.+ +..+..+... ...... ...+..++++++|+++++...++.|.+||. +++.+..+....
T Consensus 199 ~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~ 276 (333)
T 2dg1_A 199 TETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE 276 (333)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGG
T ss_pred EeCCCCeEEEEEecCCCcCcccccceEEEecCC-CCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCcc
Confidence 4 5678999999964 3322221100 000011 134677999999998877777889999998 466665554311
Q ss_pred --CCCeEEEEEcCCCCEEEEEECCC------eEEEEECC
Q 002266 237 --VQPICFLSWSPNGKYMATSSLDR------QILIWDVG 267 (945)
Q Consensus 237 --~~~I~~l~fSpdg~~Lasgs~Dg------~I~IWD~~ 267 (945)
...+.+++|+|+++.|+.++.++ .|..+++.
T Consensus 277 g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 277 GHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred ccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 11588999999987776665553 45555543
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.55 E-value=1.4e-11 Score=132.78 Aligned_cols=276 Identities=11% Similarity=-0.016 Sum_probs=193.1
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCee
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~ 95 (945)
+...+.+++++++|..+++.. .++.|.+|+.. +......+..+...+.++++.++|.++++...++.|..|+.. ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~-~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQH-KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcC-CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 346789999999999776653 67899999976 322211222334678999999999877776667889999977 554
Q ss_pred eee-cccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEE-EecCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q 002266 96 QTN-ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV-LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWE 173 (945)
Q Consensus 96 ~~~-l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~-l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwD 173 (945)
... +......+..+++.++|.++++...++.|..|+.. ++.... +......+.+++++++++++++...++.|.+||
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 322 22234678999999999887776667889999987 554422 233456789999999999777666678899999
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEe-ecCCCCCCeEEEEEcCCCCEE
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS-LRGDHVQPICFLSWSPNGKYM 252 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~-~~~~h~~~I~~l~fSpdg~~L 252 (945)
. +++... +.. ......+..++++++|+++++....+.|.+||. ++..... +.. +...+.+++++++|++.
T Consensus 174 ~-~g~~~~-~~~-----~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-~~~~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 174 N-TGKLEE-YPL-----PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPT-PNARPHAITAGKNSEIW 244 (300)
T ss_dssp T-TCCEEE-EEC-----SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSS-TTCCEEEEEECSTTCEE
T ss_pred C-CCcEEE-eeC-----CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCC-CCCCceEEEECCCCCEE
Confidence 8 554332 221 112245688999999987776666778999998 4544332 322 45678899999999977
Q ss_pred EEEECCCeEEEEECCCCeeeee-c-cCCCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 253 ATSSLDRQILIWDVGKKLDIDR-Q-KFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 253 asgs~Dg~I~IWD~~~~~~i~~-~-~~~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
++...++.|.+||.. +..... . .....+.++++.++|+.+++.. . .|..++.
T Consensus 245 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 245 FTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred EeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 776667899999984 443322 2 2345688999999998555443 4 6666654
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.54 E-value=1.8e-13 Score=167.90 Aligned_cols=249 Identities=9% Similarity=-0.047 Sum_probs=170.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEc----CCCeEEEEcCCCCccc-cccccccccceEEEEEecCCCEEEEEEcCCc-----
Q 002266 15 GNAASFCSILWDQQAHHLVTASS----SETTISIHDPLLPSNL-PKILRHHRDGVTALALSPNSTCLASGSIDHS----- 84 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~----~dg~V~IWd~~~~~~~-~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~----- 84 (945)
+|...+.+++|||||++|+.+.+ .+..|++||+.++... ...+... ....++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCcc
Confidence 44457899999999999997643 2468999999887533 1122211 1268999999999999988766
Q ss_pred --------EEEEEcCCCe----eeeecccCCCCEEEEEEecCCCEEEEEECCC----cEEEEEcCCCeEEEEEecCCCCE
Q 002266 85 --------VKLYKFPGGE----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDE----GIKLINTIDGSIARVLKGHKGPV 148 (945)
Q Consensus 85 --------V~iwdl~~g~----~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg----~I~iwd~~~~~~~~~l~~h~~~V 148 (945)
|++|++.++. ++.....+...+..+.|+|||++|+.++.++ .|++|+..++. ...+..+...+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCce
Confidence 9999998775 2222333446788999999999998887666 67777665554 34455566666
Q ss_pred EEEEEccCCCEEEEEe---CCCcEEEEEccCCee--eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEEC
Q 002266 149 TGLAFDPNSEYLASID---SIGTVIYWELQSGRE--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDR 223 (945)
Q Consensus 149 ~~lafspdg~~Las~s---~Dg~I~iwDl~t~~~--i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~ 223 (945)
....| ++|.+++.+. .++.|.+||+.++.. ...+... .....+..++|+ ++.++++...++..++|.+
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-----~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-----DSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-----CSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-----CCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 77777 5666444443 257899999977642 1222111 112346678887 6777888888888777755
Q ss_pred C-CCcEEEeecCCCCCCeEEEEEcCCCCEEEEEE----CCCeEEEEECCCCeeee
Q 002266 224 D-TAEKLFSLRGDHVQPICFLSWSPNGKYMATSS----LDRQILIWDVGKKLDID 273 (945)
Q Consensus 224 ~-t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs----~Dg~I~IWD~~~~~~i~ 273 (945)
. +++....+.......+..++++|++..|+... ..+.|++||+.+++...
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~ 402 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSEL 402 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred eCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 4 35555556543356778888999998766332 24789999998876543
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=1.8e-12 Score=143.93 Aligned_cols=255 Identities=11% Similarity=-0.037 Sum_probs=182.3
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
.....+++ ++..++++...++.|.+||..+... ...+. .......++++++++++++...++.|.+||..+++...
T Consensus 44 ~~~~~i~~--~~~~lyv~~~~~~~v~viD~~t~~~-~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 44 DVAQSMVI--RDGIGWIVVNNSHVIFAIDINTFKE-VGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp SCEEEEEE--ETTEEEEEEGGGTEEEEEETTTCCE-EEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred ccceEEEE--ECCEEEEEEcCCCEEEEEECcccEE-EEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 44677777 3455666655789999999987643 33343 34678999999998544444378999999999998776
Q ss_pred ecccCC-----CCEEEEEEecCCCEEEEEE--CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCC----
Q 002266 98 NITRFT-----LPIRVLAFNKSGSMLAAAG--DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI---- 166 (945)
Q Consensus 98 ~l~~~~-----~~V~~l~fspdg~~Lasgs--~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~D---- 166 (945)
.+.... .....+++ ++..+.++. .++.|.+||+.+++....+... .....++++|+|++++++..+
T Consensus 120 ~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred EEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCC
Confidence 655322 13456667 345555555 4789999999999888777643 345789999999977776554
Q ss_pred ------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE-eecCCCCCC
Q 002266 167 ------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF-SLRGDHVQP 239 (945)
Q Consensus 167 ------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~-~~~~~h~~~ 239 (945)
+.|.+||..+++....+.... ......++|+|++++|+++.. .|.+||..+++... .+.......
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~~------g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~ 268 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFKL------GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTK 268 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECCT------TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSC
T ss_pred ccccCCceEEEEECCCCeEEEEEecCC------CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCc
Confidence 789999999888766654211 124688999999999988754 89999998877532 111112457
Q ss_pred eEEEEEcC-CCCEEEEE----ECCCeEEEEECCCCeeeeeccCCCCeeEEEEec
Q 002266 240 ICFLSWSP-NGKYMATS----SLDRQILIWDVGKKLDIDRQKFDDRICCMAWKP 288 (945)
Q Consensus 240 I~~l~fSp-dg~~Lasg----s~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~sp 288 (945)
...++++| ++.++++. ..++.|.+||.. ++.+..+........++|-.
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~~ 321 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWKL 321 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEEC
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEec
Confidence 88999999 56666665 568899999998 88877766556667777643
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.52 E-value=1.3e-11 Score=147.13 Aligned_cols=272 Identities=11% Similarity=0.025 Sum_probs=193.4
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC--CCeeeeecccCCCCE
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP--GGEFQTNITRFTLPI 106 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~--~g~~~~~l~~~~~~V 106 (945)
+..++++...++.|.++|..+.. ....+.. ...+..+.|+|||++|++++.++.|.+||+. +++.+..+.. ....
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~-v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P 242 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYE-IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEA 242 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCC-EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEE
T ss_pred CceEEEEeCCCCeEEEEECCCCe-EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCC
Confidence 34555555689999999998764 3333433 3456799999999999999999999999995 7777766654 3346
Q ss_pred EEEEEe----cCCCEEEEEEC-CCcEEEEEcCCCeEEEEEecC-----------CCCEEEEEEccCCCE-EEEEeCCCcE
Q 002266 107 RVLAFN----KSGSMLAAAGD-DEGIKLINTIDGSIARVLKGH-----------KGPVTGLAFDPNSEY-LASIDSIGTV 169 (945)
Q Consensus 107 ~~l~fs----pdg~~Lasgs~-Dg~I~iwd~~~~~~~~~l~~h-----------~~~V~~lafspdg~~-Las~s~Dg~I 169 (945)
..++|+ |+|+++++++. ++.|.|+|..+.+.+..+... ...+..+..++++.. ++....+|.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 899999 69999888765 588999999999888776521 126788999987664 4455667999
Q ss_pred EEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecC----CCCCCeEEEE
Q 002266 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRG----DHVQPICFLS 244 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~----~h~~~I~~l~ 244 (945)
.++|............. .......+.|+|+|++|+++. .++.|.++|+.+++.+..+.. .|.+.-..+
T Consensus 323 ~~vd~~~~~~~~v~~i~------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~- 395 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEIS------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF- 395 (567)
T ss_dssp EEEETTCSSEEEEEEEE------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-
T ss_pred EEEecCCCccceeeeee------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-
Confidence 99998765433221110 113356789999999988766 478999999999987665543 233222222
Q ss_pred EcCCCC-EEEEEE-CCCeEEEEECCC-------CeeeeeccCC-CCeeEEEEecCCCEEEEEEc-------CCeEEEEec
Q 002266 245 WSPNGK-YMATSS-LDRQILIWDVGK-------KLDIDRQKFD-DRICCMAWKPIGNALAVIDV-------MGKYGVWES 307 (945)
Q Consensus 245 fSpdg~-~Lasgs-~Dg~I~IWD~~~-------~~~i~~~~~~-~~V~~la~spdg~~Las~s~-------DG~I~iWd~ 307 (945)
++|++. +++++. .++.|.++|..+ .+.+..+... ..-..+..+|++++|.+... .+.|.++|+
T Consensus 396 ~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence 588754 444543 468999999987 5566665443 23355778999998888663 358999987
Q ss_pred CCC
Q 002266 308 VVP 310 (945)
Q Consensus 308 ~~~ 310 (945)
...
T Consensus 476 ~~~ 478 (567)
T 1qks_A 476 KAM 478 (567)
T ss_dssp GGC
T ss_pred Ccc
Confidence 643
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=4.5e-12 Score=142.59 Aligned_cols=281 Identities=9% Similarity=0.000 Sum_probs=198.1
Q ss_pred EEECCCCCEEEEEEcC----CCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE----------cCCcEEEE
Q 002266 23 ILWDQQAHHLVTASSS----ETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS----------IDHSVKLY 88 (945)
Q Consensus 23 vafspdg~~L~t~g~~----dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs----------~Dg~V~iw 88 (945)
....|+++.++++... ++.|.+.|..+.. ....+.....+ . ++++|||++|++++ .++.|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~-v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGR-VIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTE-EEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCe-EEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 4468999999988643 6799999988774 34444443444 4 99999999888775 35789999
Q ss_pred EcCCCeeeeecccCC-------CCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCE
Q 002266 89 KFPGGEFQTNITRFT-------LPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEY 159 (945)
Q Consensus 89 dl~~g~~~~~l~~~~-------~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~ 159 (945)
|..+++.+..+.-.. .....++|+|||++++++.. ++.|.++|+.+++.+.++... + . ...+......
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~ 191 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDT 191 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCce
Confidence 999998877764221 24567999999999998874 688999999999998888642 1 1 2334334567
Q ss_pred EEEEeCCCcEEEEEccC-CeeeeeecccCCCCCCCCCCc-eEEEEc-CCCCEEEEEeCCCeEEEEECCCCcE--EEeec-
Q 002266 160 LASIDSIGTVIYWELQS-GRELHNLKRVAPDIGSDPSSM-NVLSWS-PDGETLAVPGLKNDVVMYDRDTAEK--LFSLR- 233 (945)
Q Consensus 160 Las~s~Dg~I~iwDl~t-~~~i~~~~~~~~~~~~~~~~i-~~l~~s-pdg~~La~gs~dg~I~vwD~~t~~~--~~~~~- 233 (945)
+++.+.||.+.+.++.+ ++....... .+......+ ....|. ++|+++++ +.+|.|+++|..+... +..+.
T Consensus 192 ~~~~~~DG~~~~v~~~~~g~v~~~~~~---~~~~~~~~~~~~~~~~~~dG~~~~v-s~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGTEGTPEITHTE---VFHPEDEFLINHPAYSQKAGRLVWP-TYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECC---CCSCTTSCBCSCCEEETTTTEEEEE-BTTSEEEEEECTTSSCEECCCEES
T ss_pred eEEECCCCCEEEEECCCCCeEEEeecc---eeccccccccccceeEcCCCcEEEE-eCCCEEEEEECCCCcceeecceec
Confidence 77888899999999876 554322111 111111122 224664 67765554 5589999999976542 22221
Q ss_pred --------CCCCCCeEEEEEcCCCCEEEEEEC----------CCeEEEEECCCCeeeeeccCCCCeeEEEEecCCC-EEE
Q 002266 234 --------GDHVQPICFLSWSPNGKYMATSSL----------DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN-ALA 294 (945)
Q Consensus 234 --------~~h~~~I~~l~fSpdg~~Lasgs~----------Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~-~La 294 (945)
+........++++++++.++.... .+.|.++|+.+++.+..+.....+.+|+++++++ +|+
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly 347 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLY 347 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEE
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEE
Confidence 111234445788999888877643 2579999999999999987777899999999997 676
Q ss_pred EEE-cCCeEEEEecCCCCCC
Q 002266 295 VID-VMGKYGVWESVVPSSM 313 (945)
Q Consensus 295 s~s-~DG~I~iWd~~~~~~~ 313 (945)
++. .++.|.++|......+
T Consensus 348 ~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 348 ALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEETTTTEEEEEETTTCCEE
T ss_pred EEcCCCCeEEEEECCCCcEE
Confidence 655 4899999999876653
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=4.1e-12 Score=137.60 Aligned_cols=218 Identities=13% Similarity=0.061 Sum_probs=172.9
Q ss_pred CCCEEEEEEcCCcEEEEEcCCCeeeeecccCC-CCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCC-CCEE
Q 002266 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFT-LPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK-GPVT 149 (945)
Q Consensus 72 dg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~-~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~-~~V~ 149 (945)
.+++|++++.++.|++||..+|+.+..+..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 35789999999999999998999988887665 4788999999999888 45778999999 899888888653 5788
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Q 002266 150 GLAFDPNSEYLASIDS-IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 150 ~lafspdg~~Las~s~-Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
++.+.++|+++++.+. ++.|..+|. +++.+..+..... ..........+++.++|+++++...++.|..||.. ++.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG-IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS-CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC-CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 9999999999999887 778888875 6777666643211 11111234456789999999999999999999998 999
Q ss_pred EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccC---C----CCeeEEEEecCCCEEEEEE
Q 002266 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF---D----DRICCMAWKPIGNALAVID 297 (945)
Q Consensus 229 ~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~---~----~~V~~la~spdg~~Las~s 297 (945)
+.++.. . ..+..+.+.++|+++++++.++.|..+|..+++.+..... . ..+.+++..++|+.+++..
T Consensus 158 ~w~~~~-~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKL-S-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEC-S-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEC-C-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 888875 2 4566788899999999999888999999999988776432 1 2278888899998777763
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=1.6e-12 Score=160.70 Aligned_cols=274 Identities=11% Similarity=0.022 Sum_probs=176.8
Q ss_pred CCCCCEEEEEEcCCC--eEEEE--cCCC--Ccccccc------ccccccceEEEEEecCCCEEEEEEcC-----CcEEEE
Q 002266 26 DQQAHHLVTASSSET--TISIH--DPLL--PSNLPKI------LRHHRDGVTALALSPNSTCLASGSID-----HSVKLY 88 (945)
Q Consensus 26 spdg~~L~t~g~~dg--~V~IW--d~~~--~~~~~~~------l~~h~~~V~~la~spdg~~Lasgs~D-----g~V~iw 88 (945)
+|+|++++......+ .-.|| +... +...... ..+|...+..++|||||++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489999988763333 24444 4330 1121211 12333478899999999999887654 369999
Q ss_pred EcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCc--------------EEEEEcCCCeE--EEEEe--cCCCCEEE
Q 002266 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEG--------------IKLINTIDGSI--ARVLK--GHKGPVTG 150 (945)
Q Consensus 89 dl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~--------------I~iwd~~~~~~--~~~l~--~h~~~V~~ 150 (945)
|+.+++...... ....+..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...+.+
T Consensus 195 dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999988654311 1112357899999 99999887654 88999877652 22333 23346899
Q ss_pred EEEccCCCEEEEEeCCC-----cEEEEEccCCe-e-eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC----CeEE
Q 002266 151 LAFDPNSEYLASIDSIG-----TVIYWELQSGR-E-LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK----NDVV 219 (945)
Q Consensus 151 lafspdg~~Las~s~Dg-----~I~iwDl~t~~-~-i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d----g~I~ 219 (945)
+.|+|+|++|+..+.++ .|++||+.++. . ...+... ....... ++|+|+.|++.+.+ +.|.
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-------LKAQWDF-VDGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS-------SSSCEEE-EEEETTEEEEEECTTCTTCEEE
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC-------CCceEEE-EeccCCEEEEEECCCCCCCEEE
Confidence 99999999988877544 89999998772 1 3333221 1222333 34899988887753 4599
Q ss_pred EEECCCC-cEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC-CCeeeeecc--CCCCeeEEEEecCCCEEEE
Q 002266 220 MYDRDTA-EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVG-KKLDIDRQK--FDDRICCMAWKPIGNALAV 295 (945)
Q Consensus 220 vwD~~t~-~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~-~~~~i~~~~--~~~~V~~la~spdg~~Las 295 (945)
+||+.++ .....+...+...+..++|+ ++.++++...|+..+||.+. ++....... ....+..++|+|++..|+.
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEE
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEE
Confidence 9999875 23333333355567778887 66778888889887776553 344444333 3466889999999886654
Q ss_pred E-E---cCCeEEEEecCCC
Q 002266 296 I-D---VMGKYGVWESVVP 310 (945)
Q Consensus 296 ~-s---~DG~I~iWd~~~~ 310 (945)
. + ..+.|++||+..+
T Consensus 424 ~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 424 SFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEETTEEEEEEEEETTTT
T ss_pred EEcCCCCCCEEEEEECCCC
Confidence 3 2 3478999997643
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=1.8e-11 Score=133.37 Aligned_cols=258 Identities=9% Similarity=0.085 Sum_probs=172.7
Q ss_pred CCccccccccccccCCCCCEEEEEECCCCCEEEE-------EEcCCCeEEEEcCCCCccccccc---cccccceEEEEEe
Q 002266 1 MKVRSVKLREAHKCGNAASFCSILWDQQAHHLVT-------ASSSETTISIHDPLLPSNLPKIL---RHHRDGVTALALS 70 (945)
Q Consensus 1 Mk~~~i~~~~aH~~gh~~~V~svafspdg~~L~t-------~g~~dg~V~IWd~~~~~~~~~~l---~~h~~~V~~la~s 70 (945)
|++..+......-.++.....+++|+++|..+++ .. .++.|.+|+..++....... .++...+.+++++
T Consensus 1 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~ 79 (314)
T 1pjx_A 1 MEIPVIEPLFTKVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGK-PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCD 79 (314)
T ss_dssp CCSCEECCCCEEEECCCTTCEEEEECTTSCEEEEETTCEETTE-ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEEC
T ss_pred CccccccHhHhhhhccCCCccCceECCCCCEEEEEeccccCCC-CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEe
Confidence 4444444433321144566789999999987776 33 67899999976653211111 1245678999999
Q ss_pred cC-CCEEEEEEcCCcEEEEEcCCCeeeee-ccc----CCCCEEEEEEecCCCEEEEEECC---------------CcEEE
Q 002266 71 PN-STCLASGSIDHSVKLYKFPGGEFQTN-ITR----FTLPIRVLAFNKSGSMLAAAGDD---------------EGIKL 129 (945)
Q Consensus 71 pd-g~~Lasgs~Dg~V~iwdl~~g~~~~~-l~~----~~~~V~~l~fspdg~~Lasgs~D---------------g~I~i 129 (945)
++ |+++++ +..+.|.+|+.. ++.... ... ....+.++++.++|+++++...+ +.|..
T Consensus 80 ~~~g~l~v~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 80 RDANQLFVA-DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SSSSEEEEE-ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred cCCCcEEEE-ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 99 765554 444579999987 765433 221 12357899999999887776554 56777
Q ss_pred EEcCCCeEEEEEecCCCCEEEEEEc----cCCCEEEEE-eCCCcEEEEEcc-CCeeee--eecccCCCCCCCC-CCceEE
Q 002266 130 INTIDGSIARVLKGHKGPVTGLAFD----PNSEYLASI-DSIGTVIYWELQ-SGRELH--NLKRVAPDIGSDP-SSMNVL 200 (945)
Q Consensus 130 wd~~~~~~~~~l~~h~~~V~~lafs----pdg~~Las~-s~Dg~I~iwDl~-t~~~i~--~~~~~~~~~~~~~-~~i~~l 200 (945)
|+.. ++... +..+......++|+ |+++.|+++ ..++.|.+||+. ++.... .+.. ...+. ..+..+
T Consensus 158 ~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~----~~~~~~~~p~~i 231 (314)
T 1pjx_A 158 FTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH----IPGTHEGGADGM 231 (314)
T ss_dssp ECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE----CCCCSSCEEEEE
T ss_pred ECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE----CCCCCCCCCCce
Confidence 7765 54433 33344567899999 999766555 567899999986 443211 1111 11111 346789
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCC
Q 002266 201 SWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATS-SLDRQILIWDVGK 268 (945)
Q Consensus 201 ~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasg-s~Dg~I~IWD~~~ 268 (945)
+++++|+++++...++.|.+||..+++.+..+.. +...+.+++|+|+|++|+.+ ..++.|..|++..
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999999888877788999999987776655554 45789999999999955544 4568899999875
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=1e-11 Score=141.98 Aligned_cols=279 Identities=9% Similarity=0.020 Sum_probs=196.2
Q ss_pred CCCCEEEEEEcCC----CeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE----------cCCcEEEEEcCC
Q 002266 27 QQAHHLVTASSSE----TTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS----------IDHSVKLYKFPG 92 (945)
Q Consensus 27 pdg~~L~t~g~~d----g~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs----------~Dg~V~iwdl~~ 92 (945)
++++.++++...+ +.|.++|..+.. ....+.....+ .++++|||++|+++. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~-vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGR-ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTE-EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCE-EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 5778888776444 799999998874 34444443445 899999999888876 367899999999
Q ss_pred CeeeeecccC-------CCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCC-CEEEE
Q 002266 93 GEFQTNITRF-------TLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNS-EYLAS 162 (945)
Q Consensus 93 g~~~~~l~~~-------~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg-~~Las 162 (945)
++.+..+.-. ......+.|+|||++++++.. ++.|.++|+.+++.+..+.... . ....|++ ..+++
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~ 234 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYM 234 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEE
Confidence 9887766421 123467899999999999874 5789999999999888876422 1 2333433 55666
Q ss_pred EeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE----eecCC---
Q 002266 163 IDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF----SLRGD--- 235 (945)
Q Consensus 163 ~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~----~~~~~--- 235 (945)
.+.||.+.+.++.+++...... ........ .....+.+.+++..++..+..+.|.+.|........ .+...
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~-~~~~v~~~-p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNT-EVFHTEDE-LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEEC-CCCSCTTS-CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EcCCCCEEEEECCCCcEEEEee-eeeccCCC-ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 7778888888885555442211 00011111 111235789998888887888999999997554221 11100
Q ss_pred ----CCCCeEEEEEcCCCCEEEEEEC----------CCeEEEEECCCCeeeeeccCCCCeeEEEEecCCC-EEEEEE-cC
Q 002266 236 ----HVQPICFLSWSPNGKYMATSSL----------DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN-ALAVID-VM 299 (945)
Q Consensus 236 ----h~~~I~~l~fSpdg~~Lasgs~----------Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~-~Las~s-~D 299 (945)
.......++++|+++.+++... .+.|.++|+.+.+.+..+.......+++|+|+|+ +|+++. .+
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTT
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCC
Confidence 0112223689999887766542 3579999999999999887767799999999999 888888 58
Q ss_pred CeEEEEecCCCCCCC
Q 002266 300 GKYGVWESVVPSSMK 314 (945)
Q Consensus 300 G~I~iWd~~~~~~~~ 314 (945)
+.|.++|......+.
T Consensus 393 ~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 393 QTLHIYDAATGEELR 407 (426)
T ss_dssp TEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCCEEE
Confidence 999999998777543
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.45 E-value=9.2e-11 Score=126.34 Aligned_cols=236 Identities=9% Similarity=0.005 Sum_probs=172.2
Q ss_pred cccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeec-ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEE
Q 002266 60 HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIA 138 (945)
Q Consensus 60 h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l-~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~ 138 (945)
+...+.+++++++|.++++...++.|.+|+.. +...... ......+..+++.++|.++++...++.|..|+.. +..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~- 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII- 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-
Confidence 34678999999999877776567899999987 5543322 2235678999999999887776668889999986 432
Q ss_pred EEEe--cCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC
Q 002266 139 RVLK--GHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN 216 (945)
Q Consensus 139 ~~l~--~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg 216 (945)
..+. .....+.+++++++|.++++...++.|.+||. ++.... +.. . .....+..++++++|+.+++...++
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~--~---~~~~~~~~i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YEL--P---NKGSYPSFITLGSDNALWFTENQNN 162 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EEC--S---STTCCEEEEEECTTSCEEEEETTTT
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecC--C---CCCCCCceEEEcCCCCEEEEeCCCC
Confidence 2222 24567899999999988887777889999998 554332 211 1 1234578899999998877776678
Q ss_pred eEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee--ccCCCCeeEEEEecCCCEEE
Q 002266 217 DVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR--QKFDDRICCMAWKPIGNALA 294 (945)
Q Consensus 217 ~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~--~~~~~~V~~la~spdg~~La 294 (945)
.|.+||. +++............+..++++++|+++++...++.|.+||. ++..... ......+.+++++++|+.++
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWF 240 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEE
Confidence 9999999 665543212224456889999999997777767889999999 6554332 12346789999999998666
Q ss_pred EEEcCCeEEEEec
Q 002266 295 VIDVMGKYGVWES 307 (945)
Q Consensus 295 s~s~DG~I~iWd~ 307 (945)
+...++.|.+|+.
T Consensus 241 ~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 241 TEWGANKIGRLTS 253 (299)
T ss_dssp EETTTTEEEEEET
T ss_pred eccCCceEEEECC
Confidence 5557788999986
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=8.7e-12 Score=135.02 Aligned_cols=213 Identities=15% Similarity=0.095 Sum_probs=165.3
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCccccccccccc-cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccC-CCCE
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHR-DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF-TLPI 106 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~-~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~-~~~V 106 (945)
++.|+++ +.++.|.+||..++. ....+..+. ..+.+++++|+|++|+ +.++.|..||. +|+.+..+... ...+
T Consensus 5 ~~~lv~~-~~~~~v~~~d~~tG~-~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 5 QHLLVGG-SGWNKIAIINKDTKE-IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CEEEEEC-TTCSEEEEEETTTTE-EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CcEEEee-CCCCEEEEEECCCCe-EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 4555555 589999999987774 445555544 4688999999999888 45678999998 78888777754 3468
Q ss_pred EEEEEecCCCEEEEEEC-CCcEEEEEcCCCeEEEEEec------CCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCee
Q 002266 107 RVLAFNKSGSMLAAAGD-DEGIKLINTIDGSIARVLKG------HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE 179 (945)
Q Consensus 107 ~~l~fspdg~~Lasgs~-Dg~I~iwd~~~~~~~~~l~~------h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~ 179 (945)
.++.+.++|+++++.+. ++.|..+|. +++.+..+.. +......+++.++|++|++...++.|.+||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 88999999999999887 777888876 7777666542 11245567789999999999999999999987 888
Q ss_pred eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC-----CCCCeEEEEEcCCCCEEEE
Q 002266 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD-----HVQPICFLSWSPNGKYMAT 254 (945)
Q Consensus 180 i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~-----h~~~I~~l~fSpdg~~Las 254 (945)
+..+... .....+...++|+.+++++.++.|..+|..+++.+.++... ....+..++..++|.++++
T Consensus 158 ~w~~~~~--------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~ 229 (276)
T 3no2_A 158 LNSVKLS--------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 229 (276)
T ss_dssp EEEEECS--------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEE
T ss_pred EEEEECC--------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEE
Confidence 8877642 23455778899999999888889999999999998888531 1123778888999998888
Q ss_pred EE
Q 002266 255 SS 256 (945)
Q Consensus 255 gs 256 (945)
..
T Consensus 230 ~~ 231 (276)
T 3no2_A 230 NW 231 (276)
T ss_dssp EE
T ss_pred ec
Confidence 74
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=4.4e-12 Score=156.70 Aligned_cols=244 Identities=9% Similarity=0.023 Sum_probs=165.2
Q ss_pred CCEEEEEECCCCCEEEEEEcCCC----eEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCc---------
Q 002266 18 ASFCSILWDQQAHHLVTASSSET----TISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHS--------- 84 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg----~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~--------- 84 (945)
..+..++|||||++|+.+.+.+| .|++||+.++..... ..+...+..++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 46889999999999998864433 599999987743221 112222357899999 99998876654
Q ss_pred -----EEEEEcCCCee----eeecccCCCCEEEEEEecCCCEEEEEECCC-----cEEEEEcCCC--eEEEEEecCCCCE
Q 002266 85 -----VKLYKFPGGEF----QTNITRFTLPIRVLAFNKSGSMLAAAGDDE-----GIKLINTIDG--SIARVLKGHKGPV 148 (945)
Q Consensus 85 -----V~iwdl~~g~~----~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg-----~I~iwd~~~~--~~~~~l~~h~~~V 148 (945)
|++|++.++.. +.....+...+..+.|+|||++|+..+.++ .|++||+.++ .....+..+...+
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 88999877652 212222233588999999999998887654 7999999877 3145555555555
Q ss_pred EEEEEccCCCEEEEEeCC----CcEEEEEccCCe-eeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEEC
Q 002266 149 TGLAFDPNSEYLASIDSI----GTVIYWELQSGR-ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDR 223 (945)
Q Consensus 149 ~~lafspdg~~Las~s~D----g~I~iwDl~t~~-~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~ 223 (945)
.... +|+|+.|+..+.+ +.|.+||+.++. ....+.. .+...+..++|. ++.++++...++..+||.+
T Consensus 320 ~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~------~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 320 WDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP------ESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp EEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC------CCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred EEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec------CCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 5554 4889888877653 459999988752 2222221 112345567777 5667777777887666654
Q ss_pred C-CCcEEEeecCCCCCCeEEEEEcCCCCEEEEEE----CCCeEEEEECCCCeee
Q 002266 224 D-TAEKLFSLRGDHVQPICFLSWSPNGKYMATSS----LDRQILIWDVGKKLDI 272 (945)
Q Consensus 224 ~-t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs----~Dg~I~IWD~~~~~~i 272 (945)
. ++.....+.......+..+.++|++..|+... ..+.|++||+.+++..
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 3 45555666543456788899999988665332 2478999999887743
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.44 E-value=3e-11 Score=131.64 Aligned_cols=238 Identities=11% Similarity=0.078 Sum_probs=166.4
Q ss_pred ccceEEEEEecCCCEEEE-------EEcCCcEEEEEcCCCeeeeecc----cCCCCEEEEEEecC-CCEEEEEECCCcEE
Q 002266 61 RDGVTALALSPNSTCLAS-------GSIDHSVKLYKFPGGEFQTNIT----RFTLPIRVLAFNKS-GSMLAAAGDDEGIK 128 (945)
Q Consensus 61 ~~~V~~la~spdg~~Las-------gs~Dg~V~iwdl~~g~~~~~l~----~~~~~V~~l~fspd-g~~Lasgs~Dg~I~ 128 (945)
-....+++|+++|.++++ +..++.|.+|+..+++...... .+...+..++++++ |+++ +++....|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~-v~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLF-VADMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEE-EEETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEE-EEECCCCEE
Confidence 345689999999988877 5778899999988777543221 13457899999999 6544 444455799
Q ss_pred EEEcCCCeEEEE-Eec----CCCCEEEEEEccCCCEEEEEeCC---------------CcEEEEEccCCeeeeeecccCC
Q 002266 129 LINTIDGSIARV-LKG----HKGPVTGLAFDPNSEYLASIDSI---------------GTVIYWELQSGRELHNLKRVAP 188 (945)
Q Consensus 129 iwd~~~~~~~~~-l~~----h~~~V~~lafspdg~~Las~s~D---------------g~I~iwDl~t~~~i~~~~~~~~ 188 (945)
+||.. ++.... ... ....+.+++++++|+++++...+ +.|..|+.. ++.......
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--- 170 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--- 170 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE---
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC---
Confidence 99987 665432 221 12357899999999888776654 567777765 433222211
Q ss_pred CCCCCCCCceEEEEc----CCCCEEEEE-eCCCeEEEEECC-CCc-----EEEeecCCCC-CCeEEEEEcCCCCEEEEEE
Q 002266 189 DIGSDPSSMNVLSWS----PDGETLAVP-GLKNDVVMYDRD-TAE-----KLFSLRGDHV-QPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 189 ~~~~~~~~i~~l~~s----pdg~~La~g-s~dg~I~vwD~~-t~~-----~~~~~~~~h~-~~I~~l~fSpdg~~Lasgs 256 (945)
......++|+ |+|+.|+++ ..++.|.+||.. ++. ....+.. +. ..+..++++++|+++++..
T Consensus 171 -----~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 171 -----FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG-THEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp -----ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEE
T ss_pred -----CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC-CCCCCCCceEECCCCCEEEEEc
Confidence 1234678999 999766655 457899999976 443 2223332 33 5678899999999888888
Q ss_pred CCCeEEEEECCCCeeeeeccC-CCCeeEEEEecCCCEEEEEE-cCCeEEEEecCCC
Q 002266 257 LDRQILIWDVGKKLDIDRQKF-DDRICCMAWKPIGNALAVID-VMGKYGVWESVVP 310 (945)
Q Consensus 257 ~Dg~I~IWD~~~~~~i~~~~~-~~~V~~la~spdg~~Las~s-~DG~I~iWd~~~~ 310 (945)
.++.|.+||..+++.+..... ...+.+++|+++++.|++++ .++.|..|++..+
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 889999999987666554433 36799999999999665554 5688999987653
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.42 E-value=2e-10 Score=129.83 Aligned_cols=254 Identities=11% Similarity=0.049 Sum_probs=171.8
Q ss_pred EEEECCCCCEEEEEEc---------CCCeEEEEcCCCCcccccccccc-------ccceEEEEEecCCCEEEEEEc--CC
Q 002266 22 SILWDQQAHHLVTASS---------SETTISIHDPLLPSNLPKILRHH-------RDGVTALALSPNSTCLASGSI--DH 83 (945)
Q Consensus 22 svafspdg~~L~t~g~---------~dg~V~IWd~~~~~~~~~~l~~h-------~~~V~~la~spdg~~Lasgs~--Dg 83 (945)
.++|+|||++|+++.. .++.|.+||..+... ...+... ......++|+|||++|++++. ++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~-~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP-IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE-EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 7899999999998852 367899999876532 2222110 123468999999999998874 47
Q ss_pred cEEEEEcCCCeeeee-cccCCCCEEEEEEecCC-CEEEEEECCCcEEEEEcCCCeEEEEEe-----cCCCCE-EEEEEcc
Q 002266 84 SVKLYKFPGGEFQTN-ITRFTLPIRVLAFNKSG-SMLAAAGDDEGIKLINTIDGSIARVLK-----GHKGPV-TGLAFDP 155 (945)
Q Consensus 84 ~V~iwdl~~g~~~~~-l~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~iwd~~~~~~~~~l~-----~h~~~V-~~lafsp 155 (945)
.|.++| .+++.... +.. .. ++.+.|++ +.+++.+.||.+.+++. +++...... ....++ ....+.+
T Consensus 149 ~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred eEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 899999 99987766 542 22 24455654 45566778999999999 877653322 112222 3355677
Q ss_pred CCCEEEEEeCCCcEEEEEccCCe--eeeeecccCC---CCCCCCCCceEEEEcCCCCEEEEEeC----------CCeEEE
Q 002266 156 NSEYLASIDSIGTVIYWELQSGR--ELHNLKRVAP---DIGSDPSSMNVLSWSPDGETLAVPGL----------KNDVVM 220 (945)
Q Consensus 156 dg~~Las~s~Dg~I~iwDl~t~~--~i~~~~~~~~---~~~~~~~~i~~l~~spdg~~La~gs~----------dg~I~v 220 (945)
++..++..+..+.+.+.|+..+. .+..+..... ...........+.++|+++.+++... .+.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 66655555577899999987652 2222211100 01111233445789999998888653 357999
Q ss_pred EECCCCcEEEeecCCCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEECCCCeeeee-ccCCCCeeEE
Q 002266 221 YDRDTAEKLFSLRGDHVQPICFLSWSPNGK-YMATSS-LDRQILIWDVGKKLDIDR-QKFDDRICCM 284 (945)
Q Consensus 221 wD~~t~~~~~~~~~~h~~~I~~l~fSpdg~-~Lasgs-~Dg~I~IWD~~~~~~i~~-~~~~~~V~~l 284 (945)
+|..+++.+..+.. ......++|+|||+ +++++. .++.|.|||+.+++.+.. .........+
T Consensus 303 ID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~ 367 (373)
T 2mad_H 303 VTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVL 367 (373)
T ss_pred EECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEE
Confidence 99999999888864 34688999999999 777776 489999999999998877 4444433333
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.40 E-value=2.2e-11 Score=136.90 Aligned_cols=261 Identities=13% Similarity=0.073 Sum_probs=180.3
Q ss_pred EEEECCCCCEEEEEEc---------CCCeEEEEcCCCCcccccccccc-------ccceEEEEEecCCCEEEEEEc--CC
Q 002266 22 SILWDQQAHHLVTASS---------SETTISIHDPLLPSNLPKILRHH-------RDGVTALALSPNSTCLASGSI--DH 83 (945)
Q Consensus 22 svafspdg~~L~t~g~---------~dg~V~IWd~~~~~~~~~~l~~h-------~~~V~~la~spdg~~Lasgs~--Dg 83 (945)
.++++|||++++++.. .++.|.+||..+... ...+... ......++|+|||++|+++.. ++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v-~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~ 160 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP-TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP 160 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE-EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCC
Confidence 3899999999988752 357899999987643 3332211 124567899999999998874 68
Q ss_pred cEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCC-CeEEEEEecC----CCCEE-EEEEc-cC
Q 002266 84 SVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID-GSIARVLKGH----KGPVT-GLAFD-PN 156 (945)
Q Consensus 84 ~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~-~~~~~~l~~h----~~~V~-~lafs-pd 156 (945)
.|.++|+.+++.+..+.-. + . ...+....+.+++.+.||.+.++++.+ ++.......+ ..++. ...|. ++
T Consensus 161 ~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~d 237 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA 237 (386)
T ss_dssp EEEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTT
T ss_pred eEEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCC
Confidence 9999999999988877532 1 1 233333456777888899999999876 5543322111 12221 24564 57
Q ss_pred CCEEEEEeCCCcEEEEEccCCe--eeeeecccCC---CCCCCCCCceEEEEcCCCCEEEEEeC----------CCeEEEE
Q 002266 157 SEYLASIDSIGTVIYWELQSGR--ELHNLKRVAP---DIGSDPSSMNVLSWSPDGETLAVPGL----------KNDVVMY 221 (945)
Q Consensus 157 g~~Las~s~Dg~I~iwDl~t~~--~i~~~~~~~~---~~~~~~~~i~~l~~spdg~~La~gs~----------dg~I~vw 221 (945)
|++++ .+.+|.|++.|+.+.. .+..+..... ..+........++++++++.+++... .+.|.++
T Consensus 238 G~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 238 GRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 76555 5568999999997653 2222220000 00111223345788999998888643 2579999
Q ss_pred ECCCCcEEEeecCCCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEECCCCeeeeeccCCCCeeEEEEecC
Q 002266 222 DRDTAEKLFSLRGDHVQPICFLSWSPNGK-YMATSS-LDRQILIWDVGKKLDIDRQKFDDRICCMAWKPI 289 (945)
Q Consensus 222 D~~t~~~~~~~~~~h~~~I~~l~fSpdg~-~Lasgs-~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spd 289 (945)
|+.+++.+..+.. ...+..|+++++++ +|+++. .++.|.|+|..+++.+..+........|.+++|
T Consensus 317 D~~t~kv~~~i~v--g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 317 DAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp ETTTCCEEEEEEE--EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred ECCCCeEEEEEEC--CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 9999999988864 24788999999997 666654 589999999999999999888888888888876
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.38 E-value=1.2e-10 Score=133.38 Aligned_cols=240 Identities=13% Similarity=0.033 Sum_probs=168.3
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCC--cEEEEEcCCCeEEE
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE--GIKLINTIDGSIAR 139 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg--~I~iwd~~~~~~~~ 139 (945)
.....|+|+++++++++...++.|++||..++...........+ . ++|++++..|+++..++ .|.+|+...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46789999999987777667789999999888766555443333 3 99999999999988766 78899987665433
Q ss_pred EE----ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCC-CceEEEEcCC-CCEEEEEe
Q 002266 140 VL----KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPS-SMNVLSWSPD-GETLAVPG 213 (945)
Q Consensus 140 ~l----~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~-~i~~l~~spd-g~~La~gs 213 (945)
.+ ......+.+++++|++..|+++..++.|+.||..++... .+.... ....... +.+.++|+|+ +.++++-.
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~-~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLE-LSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECC-CCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEeccc-ccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 43 224567789999995555666777889999999876532 221110 0001111 1238999995 55555556
Q ss_pred CCCeEEEEECCCCcEEEeecCCC--------------CCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCeeeeeccC-
Q 002266 214 LKNDVVMYDRDTAEKLFSLRGDH--------------VQPICFLSWSPNGKYMATSS-LDRQILIWDVGKKLDIDRQKF- 277 (945)
Q Consensus 214 ~dg~I~vwD~~t~~~~~~~~~~h--------------~~~I~~l~fSpdg~~Lasgs-~Dg~I~IWD~~~~~~i~~~~~- 277 (945)
..+.|+.|+.... +..+.+.. -.....++|+|+|+++++-+ .++.|+.|++.++.......+
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~ 364 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQV 364 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCC
Confidence 6789999998643 22222211 23478899999999888877 789999999888776544332
Q ss_pred --------------CCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 278 --------------DDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 278 --------------~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
-....+++++++|.++++-..++.|+.+.+
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 135889999999877777777788887764
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.36 E-value=2.9e-10 Score=123.92 Aligned_cols=229 Identities=11% Similarity=0.068 Sum_probs=156.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
.---+..|+|++..|+.+...++.|..||..++.. ..+ .....+.+++++++|+++++ . ++.|.+||..+++...
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV--QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE--EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence 34567889998877777766789999999876532 222 23567999999999995554 4 5679999998877543
Q ss_pred ecccC----CCCEEEEEEecCCCEEEEEECC---------CcEEEEEcCC-CeEEEEEecCCCCEEEEEEccCCCEEEE-
Q 002266 98 NITRF----TLPIRVLAFNKSGSMLAAAGDD---------EGIKLINTID-GSIARVLKGHKGPVTGLAFDPNSEYLAS- 162 (945)
Q Consensus 98 ~l~~~----~~~V~~l~fspdg~~Lasgs~D---------g~I~iwd~~~-~~~~~~l~~h~~~V~~lafspdg~~Las- 162 (945)
..... ...+.++++.|+|+++++.... ....||.+.. +... .+..+......++|+|+++.|+.
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEe
Confidence 32211 2347889999999966654322 2334555443 3332 23334456789999999987755
Q ss_pred EeCCCcEEEEEc--cCCeee--eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCC
Q 002266 163 IDSIGTVIYWEL--QSGREL--HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238 (945)
Q Consensus 163 ~s~Dg~I~iwDl--~t~~~i--~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~ 238 (945)
.+.++.|.+|++ .++... ..+... .........++++++|++.++....+.|.+||..+++.+..+.. +..
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~----~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~-p~~ 241 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKL----EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL-PVD 241 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEEC----CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC-SSS
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEEC----CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC-CCC
Confidence 455788999997 445321 111111 01123467899999998777777788899999998988887765 456
Q ss_pred CeEEEEEc-CCCCEEEEEEC
Q 002266 239 PICFLSWS-PNGKYMATSSL 257 (945)
Q Consensus 239 ~I~~l~fS-pdg~~Lasgs~ 257 (945)
.+++++|. |+++.|+.++.
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEeCCCCCEEEEEcC
Confidence 79999998 88877665553
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.32 E-value=6.5e-10 Score=121.16 Aligned_cols=224 Identities=15% Similarity=0.116 Sum_probs=154.4
Q ss_pred ceEEEEEecCC-CEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE
Q 002266 63 GVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141 (945)
Q Consensus 63 ~V~~la~spdg-~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l 141 (945)
-..+..|++++ .++++...++.|..|+..++... .+ .....+.+++++++|+++++ . +..|.+||..+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 44688899965 45555556789999998877642 22 24568999999999995544 4 567999999887654333
Q ss_pred ecC----CCCEEEEEEccCCCEEEEEeCC---------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCE
Q 002266 142 KGH----KGPVTGLAFDPNSEYLASIDSI---------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGET 208 (945)
Q Consensus 142 ~~h----~~~V~~lafspdg~~Las~s~D---------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~ 208 (945)
... ...+.+++++|+|+++++.... ..-.+|.+........+.. .....+.++|+|+++.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-------~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-------QVDISNGLDWSLDHKI 162 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-------EESBEEEEEECTTSCE
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-------ccccccceEEcCCCCE
Confidence 221 2347899999999977655322 2345555543222221111 1123477999999987
Q ss_pred EEEE-eCCCeEEEEEC--CCCcE-----EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCC-C
Q 002266 209 LAVP-GLKNDVVMYDR--DTAEK-----LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFD-D 279 (945)
Q Consensus 209 La~g-s~dg~I~vwD~--~t~~~-----~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~-~ 279 (945)
|+++ +..+.|.+|++ .++.. ...+.. +...+..++++++|++.++....+.|.+||..+++.+..+... .
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~ 241 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD 241 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC
Confidence 7554 55789999987 45542 222222 3456788999999998888888889999999988888776554 6
Q ss_pred CeeEEEEe-cCCCEEEEEEc
Q 002266 280 RICCMAWK-PIGNALAVIDV 298 (945)
Q Consensus 280 ~V~~la~s-pdg~~Las~s~ 298 (945)
.+++++|. |+++.|++++.
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEeCCCCCEEEEEcC
Confidence 79999998 88887777654
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.32 E-value=1.9e-09 Score=116.01 Aligned_cols=236 Identities=8% Similarity=-0.004 Sum_probs=169.6
Q ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeee-cccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEE
Q 002266 61 RDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTN-ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIAR 139 (945)
Q Consensus 61 ~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~-l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~ 139 (945)
...+.++++.++|.++++...++.|.+|+.. ++.... +......+..+++.++|.+.++...++.|..||.. +....
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4578899999999888776678899999987 554432 22233578999999999877776667889999987 55432
Q ss_pred -EEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeE
Q 002266 140 -VLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDV 218 (945)
Q Consensus 140 -~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I 218 (945)
.+......+.+++++++|.++++...++.|..||.. ++... +.. + .....+..+++.++|+++++...++.|
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~--~---~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDL--P---NKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EEC--S---STTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccC--C---CCCCCceeEEECCCCCEEEEecCCCeE
Confidence 222234678999999999988877768899999987 54332 211 1 123457889999999966666557899
Q ss_pred EEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee--ccCCCCeeEEEEecCCCEEEEE
Q 002266 219 VMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR--QKFDDRICCMAWKPIGNALAVI 296 (945)
Q Consensus 219 ~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~--~~~~~~V~~la~spdg~~Las~ 296 (945)
.+||. +++........+...+..++++++|.++++....+.|.+|+. ++..... ......+.++++.++|+.+++.
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 99998 555433222124457889999999987777766788999998 4443332 2234568999999999866655
Q ss_pred EcCCeEEEEec
Q 002266 297 DVMGKYGVWES 307 (945)
Q Consensus 297 s~DG~I~iWd~ 307 (945)
..++.|..|+.
T Consensus 248 ~~~~~i~~~~~ 258 (300)
T 2qc5_A 248 WGANQIGRITN 258 (300)
T ss_dssp TTTTEEEEECT
T ss_pred cCCCeEEEECC
Confidence 56788999986
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=3.8e-10 Score=123.41 Aligned_cols=234 Identities=11% Similarity=0.079 Sum_probs=159.2
Q ss_pred CCCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCee
Q 002266 16 NAASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95 (945)
Q Consensus 16 h~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~ 95 (945)
+.......+|+|+|+.|+.++..++.|..|+. .+ . ...+..+...+..++++++|+++++...++.|.+|+.. ++.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g-~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DG-T-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TS-C-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CC-C-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 33567789999999977777668899999987 33 2 33455566778999999999866665555789999975 554
Q ss_pred eeecccC----CCCEEEEEEecCCCEEEE----EEC-------------CCcEEEEEcCCCeEEEEEecCCCCEEEEEEc
Q 002266 96 QTNITRF----TLPIRVLAFNKSGSMLAA----AGD-------------DEGIKLINTIDGSIARVLKGHKGPVTGLAFD 154 (945)
Q Consensus 96 ~~~l~~~----~~~V~~l~fspdg~~Las----gs~-------------Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafs 154 (945)
....... ...+.++++.++|++.++ |.. .+.|..||..+++..... .......++|+
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~s 196 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFS 196 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEEC
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEc
Confidence 3222111 234678999999998876 321 245778887666654333 34567899999
Q ss_pred cCCCEEEEEeCC------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Q 002266 155 PNSEYLASIDSI------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 155 pdg~~Las~s~D------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
|+++.|+++... +.|.+|++..+. +........ ........++++++|+ |.+++. +.|.+|+. .++.
T Consensus 197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~---~~~~~pdgi~~d~~G~-lwv~~~-~gv~~~~~-~g~~ 269 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS---VPDGLPDGFCVDRGGW-LWSSSG-TGVCVFDS-DGQL 269 (305)
T ss_dssp TTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC---CSSSCCCSEEECTTSC-EEECCS-SEEEEECT-TSCE
T ss_pred CCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE---CCCCCCCeEEECCCCC-EEEecC-CcEEEECC-CCCE
Confidence 999988877665 689999987654 211111100 0122345689999999 445543 45999998 4666
Q ss_pred EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q 002266 229 LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWD 265 (945)
Q Consensus 229 ~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD 265 (945)
+..+.. +. .+..++|+|+++.|+.++.++ |..++
T Consensus 270 ~~~~~~-~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 270 LGHIPT-PG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEEEEC-SS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EEEEEC-CC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 666654 22 588999999998888887654 44444
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.27 E-value=9.8e-10 Score=125.79 Aligned_cols=242 Identities=14% Similarity=0.097 Sum_probs=162.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCC--cEEEEEcCCCee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDH--SVKLYKFPGGEF 95 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg--~V~iwdl~~g~~ 95 (945)
.....|+|+++|+.+++. ..++.|++||..++ ........ ..... ++|+++++.|+++..++ .|.+|+...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d-~~~~~I~~id~~~g-~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQ-RDDPRVRLISVDDN-KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEE-TTTTEEEEEETTTT-EEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEe-cCCCcEEEEECCCC-EEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 468899999999855544 47789999998765 22222222 22334 99999999998888765 788888765543
Q ss_pred eeec----ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEE----EecCCCCE--EEEEEccC-CCEEEEEe
Q 002266 96 QTNI----TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARV----LKGHKGPV--TGLAFDPN-SEYLASID 164 (945)
Q Consensus 96 ~~~l----~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~----l~~h~~~V--~~lafspd-g~~Las~s 164 (945)
...+ ......+.+++++|++..|+++..++.|+.||..++..... ..++...- ..++|+|+ +.++++-.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 3333 21445678899999555666677788899999987754322 22222222 39999995 55556666
Q ss_pred CCCcEEEEEccCCeeeeeecccCCCCC--------CCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecCC
Q 002266 165 SIGTVIYWELQSGRELHNLKRVAPDIG--------SDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRGD 235 (945)
Q Consensus 165 ~Dg~I~iwDl~t~~~i~~~~~~~~~~~--------~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~~ 235 (945)
.++.|+.|+.... +..+........ ........++++|+|+++++-+ .++.|+.|++.++... .+.+.
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~ 363 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQ 363 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEEC
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCC
Confidence 6789999987643 222222110000 0123467899999999777777 7899999998777643 33221
Q ss_pred --------------CCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q 002266 236 --------------HVQPICFLSWSPNGKYMATSSLDRQILIWDV 266 (945)
Q Consensus 236 --------------h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~ 266 (945)
.-.....++++++|.++++-..++.|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 1245789999999988888888889988765
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.27 E-value=7.2e-10 Score=121.22 Aligned_cols=235 Identities=10% Similarity=-0.035 Sum_probs=158.5
Q ss_pred cccccccccceEEEEEecCCC-EEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEc
Q 002266 54 PKILRHHRDGVTALALSPNST-CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132 (945)
Q Consensus 54 ~~~l~~h~~~V~~la~spdg~-~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~ 132 (945)
...+..+........|+++|+ ++++...++.|..|+. ++. ...+......+..++++++|+++++...++.|.+|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 333444455678899999998 5566667789999997 454 3444555677899999999997666555678999998
Q ss_pred CCCeEEEEEecC----CCCEEEEEEccCCCEEEE----EeC-------------CCcEEEEEccCCeeeeeecccCCCCC
Q 002266 133 IDGSIARVLKGH----KGPVTGLAFDPNSEYLAS----IDS-------------IGTVIYWELQSGRELHNLKRVAPDIG 191 (945)
Q Consensus 133 ~~~~~~~~l~~h----~~~V~~lafspdg~~Las----~s~-------------Dg~I~iwDl~t~~~i~~~~~~~~~~~ 191 (945)
. ++........ ...+.+++++|+|+++++ +.. .+.|..||..+++..... .
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~------ 186 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D------ 186 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E------
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c------
Confidence 5 5533222111 134678999999998876 321 246777777666543322 1
Q ss_pred CCCCCceEEEEcCCCCEEEEEeCC------CeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q 002266 192 SDPSSMNVLSWSPDGETLAVPGLK------NDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILI 263 (945)
Q Consensus 192 ~~~~~i~~l~~spdg~~La~gs~d------g~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~I 263 (945)
....+.++|+|+|+.|+++... +.|++|++..... ...+..........++++++|++.++. .+ .|.+
T Consensus 187 --~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~ 262 (305)
T 3dr2_A 187 --LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCV 262 (305)
T ss_dssp --ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEE
T ss_pred --CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEE
Confidence 1234679999999988887665 6899999875431 111211123455678999999955544 44 4999
Q ss_pred EECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEE
Q 002266 264 WDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYG 303 (945)
Q Consensus 264 WD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~ 303 (945)
|+.. ++.+..+.....+.+++|.++++.|.+++.++..+
T Consensus 263 ~~~~-g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 263 FDSD-GQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp ECTT-SCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEE
T ss_pred ECCC-CCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEE
Confidence 9984 55555555555789999999999888888765333
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.26 E-value=5.3e-10 Score=136.99 Aligned_cols=243 Identities=7% Similarity=0.021 Sum_probs=163.0
Q ss_pred CCCCCEEEEEECCCCCEEEEEEcCC----CeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCC-------
Q 002266 15 GNAASFCSILWDQQAHHLVTASSSE----TTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDH------- 83 (945)
Q Consensus 15 gh~~~V~svafspdg~~L~t~g~~d----g~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg------- 83 (945)
+|...|..++|||||++||.+.+.. ..|+|||+.++......+.. .....++|+ ||+.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4556789999999999999764332 57999999887533222211 113578999 999999888774
Q ss_pred ------cEEEEEcCCCee----eeeccc-CCCCEEEEEEecCCCEEEEEEC----CCcEEEEEcCCCe-EEEEEecCCCC
Q 002266 84 ------SVKLYKFPGGEF----QTNITR-FTLPIRVLAFNKSGSMLAAAGD----DEGIKLINTIDGS-IARVLKGHKGP 147 (945)
Q Consensus 84 ------~V~iwdl~~g~~----~~~l~~-~~~~V~~l~fspdg~~Lasgs~----Dg~I~iwd~~~~~-~~~~l~~h~~~ 147 (945)
.|++|++.++.. +..... +...+..+.|+|||++|+.... ...|+++|+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 399999877642 222222 3445788999999999876543 2479999997763 34556666666
Q ss_pred EEEEEEccCCCEEEEEe-CC---CcEEEEEccCCee--eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC---eE
Q 002266 148 VTGLAFDPNSEYLASID-SI---GTVIYWELQSGRE--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN---DV 218 (945)
Q Consensus 148 V~~lafspdg~~Las~s-~D---g~I~iwDl~t~~~--i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg---~I 218 (945)
.... |+++|..|+..+ .+ +.|..+|+.++.. ...+.. +...+. .|++++++|+....++ .|
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-------~~~~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-------ERQQVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-------CCSSCE--EEEEETTEEEEEEEETTEEEE
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-------CCCCEE--EEEEECCEEEEEEEECCeeEE
Confidence 6655 666666555444 33 5799999987643 122221 112222 8899999888776544 68
Q ss_pred EEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECC----CeEEEEECCCCee
Q 002266 219 VMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD----RQILIWDVGKKLD 271 (945)
Q Consensus 219 ~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D----g~I~IWD~~~~~~ 271 (945)
++|++..+ ....+.......+..+.+++++..|+....+ +.|+.||+.+++.
T Consensus 353 ~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 353 EQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 99998744 4444443344567778888888876655444 7899999877654
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.26 E-value=4.8e-09 Score=116.04 Aligned_cols=220 Identities=16% Similarity=0.143 Sum_probs=149.5
Q ss_pred eEEEEEecCCC-EEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEe
Q 002266 64 VTALALSPNST-CLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLK 142 (945)
Q Consensus 64 V~~la~spdg~-~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~ 142 (945)
..+.+|+|++. ++++...++.|.+|+..+++... +. ....+.+++|+++|+++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 45778999754 55555567899999998876432 22 35679999999999876654 44 49999998877543322
Q ss_pred cC----CCCEEEEEEccCCCEEEEEeC------CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE
Q 002266 143 GH----KGPVTGLAFDPNSEYLASIDS------IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212 (945)
Q Consensus 143 ~h----~~~V~~lafspdg~~Las~s~------Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g 212 (945)
.. ...+.+++++|+|+++++... .+.|..++ +++....... ....+.++|+|+|+.|+++
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--------~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--------ISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--------ESSEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--------CcccCCeEEcCCCCEEEEE
Confidence 11 235889999999997765542 24455555 4543222111 1235679999999877665
Q ss_pred -eCCCeEEEEECC--CC-c-----EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccC-CCCee
Q 002266 213 -GLKNDVVMYDRD--TA-E-----KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF-DDRIC 282 (945)
Q Consensus 213 -s~dg~I~vwD~~--t~-~-----~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~-~~~V~ 282 (945)
+.++.|.+||+. ++ . ....+.. ....+..++++++|.+.++...++.|.+||. +++.+..+.. ...++
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~ 274 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTT 274 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEE
T ss_pred ECCCCEEEEEEcccccCCcccCceEEEECCC-CCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcE
Confidence 446899999986 55 3 1222322 3355778999999998887777789999998 4555555443 34699
Q ss_pred EEEEe-cCCCEEEEEEcC
Q 002266 283 CMAWK-PIGNALAVIDVM 299 (945)
Q Consensus 283 ~la~s-pdg~~Las~s~D 299 (945)
+++|. +++..|++++..
T Consensus 275 ~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 275 CPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEESTTSCEEEEEEBC
T ss_pred EEEEecCCCCEEEEEecC
Confidence 99998 888877666544
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.26 E-value=2.6e-10 Score=130.35 Aligned_cols=260 Identities=12% Similarity=0.084 Sum_probs=175.6
Q ss_pred EEEECCCCCEEEEEEc---------CCCeEEEEcCCCCccccccccc-------cccceEEEEEecCCCEEEEEEc--CC
Q 002266 22 SILWDQQAHHLVTASS---------SETTISIHDPLLPSNLPKILRH-------HRDGVTALALSPNSTCLASGSI--DH 83 (945)
Q Consensus 22 svafspdg~~L~t~g~---------~dg~V~IWd~~~~~~~~~~l~~-------h~~~V~~la~spdg~~Lasgs~--Dg 83 (945)
.++++|||++|+++.. .++.|.++|..+... ...+.. .......++|+|||++|+++.. ++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v-v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~ 200 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP-IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAP 200 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCC
Confidence 7899999999998852 367899999887643 322221 1123457899999999999874 57
Q ss_pred cEEEEEcCCCeeeeecccCCCCEEEEEEecCC-CEEEEEECCCcEEEEEcCCCeEEEEE----ecCCCCE-EEEEEccCC
Q 002266 84 SVKLYKFPGGEFQTNITRFTLPIRVLAFNKSG-SMLAAAGDDEGIKLINTIDGSIARVL----KGHKGPV-TGLAFDPNS 157 (945)
Q Consensus 84 ~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~iwd~~~~~~~~~l----~~h~~~V-~~lafspdg 157 (945)
.|.++|+.+++.+..+.-.. . ....|++ ..+++.+.||.+.+++..+++..... .....++ ..+.|.+++
T Consensus 201 ~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 201 AVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp EEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred eEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 89999999999887766322 1 2333433 56666778888888888656544321 1111221 235678998
Q ss_pred CEEEEEeCCCcEEEEEccCCeee--eeecccC---CCCCCCCCCceEEEEcCCCCEEEEEeC----------CCeEEEEE
Q 002266 158 EYLASIDSIGTVIYWELQSGREL--HNLKRVA---PDIGSDPSSMNVLSWSPDGETLAVPGL----------KNDVVMYD 222 (945)
Q Consensus 158 ~~Las~s~Dg~I~iwDl~t~~~i--~~~~~~~---~~~~~~~~~i~~l~~spdg~~La~gs~----------dg~I~vwD 222 (945)
..++.....+.|.+.|+...... ..+.... ............++++|+++.+++... .+.|.++|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 88877788899999998765422 1111000 000001122234789999988877642 35799999
Q ss_pred CCCCcEEEeecCCCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEECCCCeeeeec-cCCCCeeEEEEecC
Q 002266 223 RDTAEKLFSLRGDHVQPICFLSWSPNGK-YMATSS-LDRQILIWDVGKKLDIDRQ-KFDDRICCMAWKPI 289 (945)
Q Consensus 223 ~~t~~~~~~~~~~h~~~I~~l~fSpdg~-~Lasgs-~Dg~I~IWD~~~~~~i~~~-~~~~~V~~la~spd 289 (945)
..+++.+..+.. ......+.|+|+|+ +++++. .++.|.|+|+.+++.+..+ ....... +..+||
T Consensus 357 ~~T~kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~-~i~~~~ 423 (426)
T 3c75_H 357 AETGERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQ-IITTHD 423 (426)
T ss_dssp TTTCCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCC-EEECCC
T ss_pred CCCCeEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCc-EEEcCC
Confidence 999999988864 23588899999999 888887 5899999999999998875 3333222 444443
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=6.1e-11 Score=133.80 Aligned_cols=179 Identities=13% Similarity=0.078 Sum_probs=136.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc---------cccccccccccceEEEEEecCCCEEEEEEcCCcEEEE
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPS---------NLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLY 88 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~---------~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iw 88 (945)
..++.+++++....+++++ .+ .+.||++.... ........+.. |+.|+| |+.+|+++ .++.|++|
T Consensus 38 ~~~nlLais~~~gll~a~~-~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAAS-GS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp SCCBCEEEETTTTEEEEEE-TT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred ccccEEEEcCCCCEEEEeC-CC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 3689999999999999887 55 67779854321 11212334566 999999 88999998 88999999
Q ss_pred EcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCc
Q 002266 89 KFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168 (945)
Q Consensus 89 dl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~ 168 (945)
|+.+.........+..++.++.+.+. .+++++.||.|.+||+.++.... +...|+|++|+|+| ++.+..||.
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSC
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 99876655556667778888887765 38889999999999999877643 34689999999999 778899999
Q ss_pred EEEEEccCCee--eeeecccCCCCC---CCCCCceEEEEcCCCCEEEE
Q 002266 169 VIYWELQSGRE--LHNLKRVAPDIG---SDPSSMNVLSWSPDGETLAV 211 (945)
Q Consensus 169 I~iwDl~t~~~--i~~~~~~~~~~~---~~~~~i~~l~~spdg~~La~ 211 (945)
+++|+...+.. ...+... +... .+...+.+++|.+++.++++
T Consensus 184 i~~~~~~~~~~~~k~~I~~P-p~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLP-SELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEEETTEEEEEEEECCC-HHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCCccccccceecCC-cccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999887775 4455322 1111 24678999999999888876
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.25 E-value=3.6e-09 Score=117.00 Aligned_cols=225 Identities=12% Similarity=0.024 Sum_probs=152.3
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeee
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTN 98 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~ 98 (945)
-..+.+|+|++..++.++..++.|.+||..++.. ..+. ....+.+++|+++|+++++. .+ .|.+|+..+++....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK--TVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE--EEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence 3567889999777777766788999999876532 2222 34679999999999877754 44 499999888775432
Q ss_pred ccc----CCCCEEEEEEecCCCEEEEEEC------CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEE-eCCC
Q 002266 99 ITR----FTLPIRVLAFNKSGSMLAAAGD------DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI-DSIG 167 (945)
Q Consensus 99 l~~----~~~~V~~l~fspdg~~Lasgs~------Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~-s~Dg 167 (945)
... ....+.+++++++|+++++... .+.|..++ +++.. .+..+......++|+|+++.|+.+ +.++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 221 1235889999999987665442 24566666 55443 333334567899999999877555 4568
Q ss_pred cEEEEEcc--CC-eee--eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEE
Q 002266 168 TVIYWELQ--SG-REL--HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICF 242 (945)
Q Consensus 168 ~I~iwDl~--t~-~~i--~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~ 242 (945)
.|.+||+. ++ ... ..+... .........++++++|.++++...++.|.+||. +++.+..+.. +...+++
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~----~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~-~~~~~~~ 275 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDS----TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-PGKQTTC 275 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEEC----TTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC-SCSBEEE
T ss_pred EEEEEEcccccCCcccCceEEEEC----CCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC-CCCCcEE
Confidence 99999986 55 311 111110 011234567999999987777666789999998 5666666654 4457999
Q ss_pred EEEc-CCCCEEEEEEC
Q 002266 243 LSWS-PNGKYMATSSL 257 (945)
Q Consensus 243 l~fS-pdg~~Lasgs~ 257 (945)
++|+ ++++.|+.++.
T Consensus 276 ~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 276 PAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEESTTSCEEEEEEB
T ss_pred EEEecCCCCEEEEEec
Confidence 9998 88877765544
No 219
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=1.3e-10 Score=131.24 Aligned_cols=174 Identities=12% Similarity=0.102 Sum_probs=137.6
Q ss_pred ceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe---------eee-ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEc
Q 002266 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGE---------FQT-NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT 132 (945)
Q Consensus 63 ~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~---------~~~-~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~ 132 (945)
++..+++++...+|++|+.++ +.+|++.+.. ... ....+.. |+.++| ++.+|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999875 6669865432 111 2223556 999999 89999999 8899999999
Q ss_pred CCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE
Q 002266 133 IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP 212 (945)
Q Consensus 133 ~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g 212 (945)
.+.........|...+.++.+.+.. +++++.||.|.+||+.++.... + ...+++++|+|+| +++|
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~----------~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-L----------AQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-E----------EESEEEEEECSSE--EEEE
T ss_pred hhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-c----------cCCceEEEEcCCc--eEEE
Confidence 8876666677788889988877653 8888999999999999876543 1 1358999999999 6788
Q ss_pred eCCCeEEEEECCCCcE--EEeecC--------CCCCCeEEEEEcCCCCEEEEEE
Q 002266 213 GLKNDVVMYDRDTAEK--LFSLRG--------DHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 213 s~dg~I~vwD~~t~~~--~~~~~~--------~h~~~I~~l~fSpdg~~Lasgs 256 (945)
..||.+++|+...... ..++.. .|...|.+++|.+++.++++=+
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 8999999999987764 455521 2668899999999999988743
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=2.2e-10 Score=127.70 Aligned_cols=260 Identities=10% Similarity=0.001 Sum_probs=170.5
Q ss_pred CCEEEEEECCCCCEEEEEEc-CCCeEEEEcCCCCcccc------ccccccccceEEEEEecCCCEEEEEEc-----CCcE
Q 002266 18 ASFCSILWDQQAHHLVTASS-SETTISIHDPLLPSNLP------KILRHHRDGVTALALSPNSTCLASGSI-----DHSV 85 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~-~dg~V~IWd~~~~~~~~------~~l~~h~~~V~~la~spdg~~Lasgs~-----Dg~V 85 (945)
..++.|+++|+|+.+++... .++.++||.+..+ ... .....|...+..++++++|+++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999998877531 2342455544332 211 111235578999999999876665433 5789
Q ss_pred EEEEcCCCeeeeeccc------CCCCEEEEEEecCCCEEEEE-E---CCCcEEEEEcCCCeEEEEEecCCCCEE-EEEEc
Q 002266 86 KLYKFPGGEFQTNITR------FTLPIRVLAFNKSGSMLAAA-G---DDEGIKLINTIDGSIARVLKGHKGPVT-GLAFD 154 (945)
Q Consensus 86 ~iwdl~~g~~~~~l~~------~~~~V~~l~fspdg~~Lasg-s---~Dg~I~iwd~~~~~~~~~l~~h~~~V~-~lafs 154 (945)
.+||+.+++....+.. +...+..+++++++..++++ . .++.|.+||+.+++..+.+.+|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999998886655432 12346889999865555444 3 578899999998887766655432111 13445
Q ss_pred cCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC-eEEEEECC---CCc---
Q 002266 155 PNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-DVVMYDRD---TAE--- 227 (945)
Q Consensus 155 pdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg-~I~vwD~~---t~~--- 227 (945)
++|..+.+.+.+|.+..|. ..++.++|+|+|+.|+++...+ .|+.++.. .+.
T Consensus 176 ~~g~~~~~~~~~g~~~~~~---------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPH---------------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp ETTEECBEECTTSCEECCC---------------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred ECCEEEEeccCCCceecee---------------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 5677777777777765542 1246799999999888877655 66666542 111
Q ss_pred -----EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccC--CCCeeEEEEecCCCEEEEEEcCC
Q 002266 228 -----KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF--DDRICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 228 -----~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~--~~~V~~la~spdg~~Las~s~DG 300 (945)
.+..+ + +......++++++|.++++...++.|.+||..+++....... ...+++++|.+++.++++.+..+
T Consensus 235 ~~~~~~~~~~-g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 235 AELGSKIERY-S-EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp HHHHTTCEEE-E-ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred hhhhcceEec-c-cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 00111 1 223456789999999999988899999999955654333222 34688999999988777765444
Q ss_pred e
Q 002266 301 K 301 (945)
Q Consensus 301 ~ 301 (945)
.
T Consensus 313 ~ 313 (343)
T 2qe8_A 313 H 313 (343)
T ss_dssp G
T ss_pred c
Confidence 3
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.20 E-value=4.5e-10 Score=137.61 Aligned_cols=237 Identities=11% Similarity=-0.016 Sum_probs=156.9
Q ss_pred cccceEEEEEecCCCEEEEEEc-----CCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCc--------
Q 002266 60 HRDGVTALALSPNSTCLASGSI-----DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEG-------- 126 (945)
Q Consensus 60 h~~~V~~la~spdg~~Lasgs~-----Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~-------- 126 (945)
|...+..++|||||++||.+.. ...|++||+.+++...... .......++|+ ||+.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 5567889999999999885432 2579999999988654311 11112467899 9999999988743
Q ss_pred -----EEEEEcCCCeE----EEEEec-CCCCEEEEEEccCCCEEEEEeC----CCcEEEEEccCCe-eeeeecccCCCCC
Q 002266 127 -----IKLINTIDGSI----ARVLKG-HKGPVTGLAFDPNSEYLASIDS----IGTVIYWELQSGR-ELHNLKRVAPDIG 191 (945)
Q Consensus 127 -----I~iwd~~~~~~----~~~l~~-h~~~V~~lafspdg~~Las~s~----Dg~I~iwDl~t~~-~i~~~~~~~~~~~ 191 (945)
|++|++.++.. +..... |...+.++.|+|+|++|+.... ...|+++|+.++. ....+...
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~----- 279 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD----- 279 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS-----
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC-----
Confidence 99999977642 222233 4556889999999998865443 2489999997763 23333211
Q ss_pred CCCCCceEEEEcCCCCEEEEEeC----CCeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECC-C--eEE
Q 002266 192 SDPSSMNVLSWSPDGETLAVPGL----KNDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLD-R--QIL 262 (945)
Q Consensus 192 ~~~~~i~~l~~spdg~~La~gs~----dg~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D-g--~I~ 262 (945)
....... |+++|..|+..+. .+.|.++|+.++.. ...+.. +...+. .|++++++|+....+ + .|+
T Consensus 280 --~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~--~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 280 --LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-ERQQVL--TVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp --SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-CCSSCE--EEEEETTEEEEEEEETTEEEEE
T ss_pred --CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-CCCCEE--EEEEECCEEEEEEEECCeeEEE
Confidence 1222333 6777776665543 35799999987653 233333 334444 899999988776654 3 689
Q ss_pred EEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcC----CeEEEEecCC
Q 002266 263 IWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVM----GKYGVWESVV 309 (945)
Q Consensus 263 IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~D----G~I~iWd~~~ 309 (945)
+|++..+..... ......+..+.+++++..|+....+ +.|..|++..
T Consensus 354 ~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 354 QFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred EEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 999886544332 2233457788888888877665544 7888888754
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.18 E-value=4e-10 Score=126.63 Aligned_cols=268 Identities=7% Similarity=-0.103 Sum_probs=177.6
Q ss_pred CCCEEEEEEcCCC----eEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE----------cCCcEEEEEcCCC
Q 002266 28 QAHHLVTASSSET----TISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS----------IDHSVKLYKFPGG 93 (945)
Q Consensus 28 dg~~L~t~g~~dg----~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs----------~Dg~V~iwdl~~g 93 (945)
....++++...++ .|.++|..+... ...+.....+ .+.++||+++++++. .++.|.+||..++
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v-~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVT-LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEE-EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeE-EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 4455666654455 888999888743 4444443445 799999999998886 3688999999999
Q ss_pred eeeeecccC-------CCCEEEEEEecCCCEEEEEEC--CCcEEE--EEcCCCeEEEEEecCCCCEEEEEEccCCC-EEE
Q 002266 94 EFQTNITRF-------TLPIRVLAFNKSGSMLAAAGD--DEGIKL--INTIDGSIARVLKGHKGPVTGLAFDPNSE-YLA 161 (945)
Q Consensus 94 ~~~~~l~~~-------~~~V~~l~fspdg~~Lasgs~--Dg~I~i--wd~~~~~~~~~l~~h~~~V~~lafspdg~-~La 161 (945)
+.+..+.-. ......++++|||++++++.. ...|.+ +|+.+ +..+... +. +.+.|++. .++
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~ 179 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHY 179 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEE
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEE
Confidence 988887532 123567999999999999875 356888 88866 3444321 11 12335443 445
Q ss_pred EEeCCCcEEEEEccC-----CeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEeecC
Q 002266 162 SIDSIGTVIYWELQS-----GRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE--KLFSLRG 234 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t-----~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~--~~~~~~~ 234 (945)
+.+.||.+.+.|+.+ ++...... ........+. . .+++..++..+. +.|.+.|..+.. .+..+.-
T Consensus 180 ~~~~dg~~~~vd~~~~~~~~~~v~~~~t---~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~ 251 (368)
T 1mda_H 180 LGSCPASLAASDLAAAPAAAGIVGAQCT---GAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDG 251 (368)
T ss_dssp CCCCTTSCEEEECCSSCCCCEECCCCSC---TTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCS
T ss_pred EEcCCCCEEEEECccccccCCeEEEEee---eeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEe
Confidence 567788888889876 33221110 0111112222 3 666666666666 999999997543 2222211
Q ss_pred C---------CCCCeEEEEEcCCCCEEEEEEC---------CCeEEEEECCCCeeeeeccCCCCeeEEEEecCCC-EEEE
Q 002266 235 D---------HVQPICFLSWSPNGKYMATSSL---------DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGN-ALAV 295 (945)
Q Consensus 235 ~---------h~~~I~~l~fSpdg~~Lasgs~---------Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~-~Las 295 (945)
. .......++|+|+|+.++.+.. ++.+.++|+.+.+.+..+.......+++|+|+|+ .+++
T Consensus 252 ~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYA 331 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEE
T ss_pred ccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEE
Confidence 0 0111222689999988876543 2356799999999998877666899999999998 4555
Q ss_pred EE-cCCeEEEEecCCCCCC
Q 002266 296 ID-VMGKYGVWESVVPSSM 313 (945)
Q Consensus 296 ~s-~DG~I~iWd~~~~~~~ 313 (945)
.. .++.|.++|....+.+
T Consensus 332 ~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 332 NSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp EETTTTEEEEEESSSCEEE
T ss_pred ccCCCCeEEEEECCCCcEE
Confidence 66 5999999999876643
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.12 E-value=3.1e-09 Score=129.78 Aligned_cols=280 Identities=13% Similarity=0.074 Sum_probs=183.8
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCcccccccccccc----------ce-EEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHRD----------GV-TALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~----------~V-~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
+..|++++ .++.|.-+|..++..... +..+.. .+ ..+++ ++..|++++.|+.|..+|..+|+.+.
T Consensus 70 ~g~vyv~~-~~~~v~AlD~~tG~~~W~-~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTG-PFSVVYALDARDGRLIWK-YDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEEC-GGGCEEEEETTTCCEEEE-ECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEc-CCCeEEEEECCCCceeEE-EcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEee
Confidence 45566665 678899999887754332 221110 00 11222 35678888899999999999998776
Q ss_pred ecccC--CCCEEEEEEec---CCCEEEEEE------CCCcEEEEEcCCCeEEEEEecCC---------------------
Q 002266 98 NITRF--TLPIRVLAFNK---SGSMLAAAG------DDEGIKLINTIDGSIARVLKGHK--------------------- 145 (945)
Q Consensus 98 ~l~~~--~~~V~~l~fsp---dg~~Lasgs------~Dg~I~iwd~~~~~~~~~l~~h~--------------------- 145 (945)
.+... ......+..+| ++ .+++++ .++.|+.||..+|+.+..+....
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred eecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 55432 10001111111 44 444543 26889999999999887765210
Q ss_pred ----------CCEEEEEEccCCCEEEEEeCCCc-------------------EEEEEccCCeeeeeecccCCCCCC--CC
Q 002266 146 ----------GPVTGLAFDPNSEYLASIDSIGT-------------------VIYWELQSGRELHNLKRVAPDIGS--DP 194 (945)
Q Consensus 146 ----------~~V~~lafspdg~~Las~s~Dg~-------------------I~iwDl~t~~~i~~~~~~~~~~~~--~~ 194 (945)
.....++++|++.++++++.++. |..||..+|+.+..+......... ..
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCC
Confidence 11125789998899999887764 999999999988877543211110 11
Q ss_pred CCceEEEEcCCCC---EEEEEeCCCeEEEEECCCCcEEEeecCCCCC---------------------------------
Q 002266 195 SSMNVLSWSPDGE---TLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ--------------------------------- 238 (945)
Q Consensus 195 ~~i~~l~~spdg~---~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~--------------------------------- 238 (945)
..+.......+|+ .++.++.+|.++++|..+++.+.........
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~ 384 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPA 384 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSC
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCC
Confidence 1222222333665 7889999999999999999987443211100
Q ss_pred -----CeEEEEEcCCCCEEEEEEC---------------------------------------------CCeEEEEECCC
Q 002266 239 -----PICFLSWSPNGKYMATSSL---------------------------------------------DRQILIWDVGK 268 (945)
Q Consensus 239 -----~I~~l~fSpdg~~Lasgs~---------------------------------------------Dg~I~IWD~~~ 268 (945)
.-..++|+|+..++++.+. +|.|..||+.+
T Consensus 385 ~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t 464 (689)
T 1yiq_A 385 FWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK 464 (689)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT
T ss_pred cccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC
Confidence 0123688998777776532 37899999999
Q ss_pred CeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCCC
Q 002266 269 KLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSM 313 (945)
Q Consensus 269 ~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~~ 313 (945)
++.+-...+..++....+...+.++++++.||.|+.||..+++.+
T Consensus 465 G~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 465 QQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp TEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 999888766665665677778889999999999999999988865
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.10 E-value=4.9e-09 Score=127.81 Aligned_cols=280 Identities=12% Similarity=0.064 Sum_probs=188.5
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCcccccccccccc-----------ceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHRD-----------GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~-----------~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
+..|++++ .++.|.-+|..++..... +..... ....+++ ++..|++++.|+.|..+|..+|+.+.
T Consensus 77 ~g~vyv~~-~~~~v~AlD~~tG~~~W~-~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSA-SWSVVHAIDTRTGNRIWT-YDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEEC-GGGCEEEEETTTTEEEEE-ECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEC-CCCeEEEEECCCCcEEEE-EcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEe
Confidence 44555554 578888888877653322 211100 0112333 35678888899999999999998876
Q ss_pred ecccC-C----CCEEEEEEecCCCEEEEEEC------CCcEEEEEcCCCeEEEEEecCCCC-------------------
Q 002266 98 NITRF-T----LPIRVLAFNKSGSMLAAAGD------DEGIKLINTIDGSIARVLKGHKGP------------------- 147 (945)
Q Consensus 98 ~l~~~-~----~~V~~l~fspdg~~Lasgs~------Dg~I~iwd~~~~~~~~~l~~h~~~------------------- 147 (945)
.+... . ..+...-.. .+..+++++. ++.|+.||..+|+.+..+......
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred eecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 65533 1 111111111 2345555543 689999999999988777542211
Q ss_pred -------------EEEEEEccCCCEEEEEeCCC-------------------cEEEEEccCCeeeeeecccCCCCC--CC
Q 002266 148 -------------VTGLAFDPNSEYLASIDSIG-------------------TVIYWELQSGRELHNLKRVAPDIG--SD 193 (945)
Q Consensus 148 -------------V~~lafspdg~~Las~s~Dg-------------------~I~iwDl~t~~~i~~~~~~~~~~~--~~ 193 (945)
...++++|++..++.++.++ .|..+|..+++.+..+........ ..
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 13578899999888887664 499999999998877654321110 00
Q ss_pred CCCceEEEEcCCC---CEEEEEeCCCeEEEEECCCCcEEEeecCCCCC----------Ce--------------------
Q 002266 194 PSSMNVLSWSPDG---ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ----------PI-------------------- 240 (945)
Q Consensus 194 ~~~i~~l~~spdg---~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~----------~I-------------------- 240 (945)
......+....+| ..+++++.+|.|+++|..+++.+..+...... ++
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence 1222233344477 68899999999999999999988765421100 01
Q ss_pred ----EEEEEcCCCCEEEEEEC-------------------------------------------CCeEEEEECCCCeeee
Q 002266 241 ----CFLSWSPNGKYMATSSL-------------------------------------------DRQILIWDVGKKLDID 273 (945)
Q Consensus 241 ----~~l~fSpdg~~Lasgs~-------------------------------------------Dg~I~IWD~~~~~~i~ 273 (945)
..++|+|++.++++... .|.|..||+.+++.+-
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 14688998888777543 2789999999999988
Q ss_pred eccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCCC
Q 002266 274 RQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSM 313 (945)
Q Consensus 274 ~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~~ 313 (945)
...+..++.+..+...+..+++++.||.+++||..++..+
T Consensus 472 ~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 472 SVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 8777666777778888889999999999999999888764
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.09 E-value=2.8e-08 Score=111.67 Aligned_cols=271 Identities=7% Similarity=0.017 Sum_probs=171.1
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCcccccccccc--------ccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecc
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHH--------RDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNIT 100 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h--------~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~ 100 (945)
+..+++++ .++.|..+|..++......-... ...+.+.- ..++..+++++.++.|..+|..+|+......
T Consensus 53 ~~~v~~~~-~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAAD-RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEc-CCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 55666665 78899999988775432221110 12232221 2245678888899999999999998765544
Q ss_pred cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCE-----EEEEEccCCCEEEEEeCCCcEEEEEcc
Q 002266 101 RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV-----TGLAFDPNSEYLASIDSIGTVIYWELQ 175 (945)
Q Consensus 101 ~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V-----~~lafspdg~~Las~s~Dg~I~iwDl~ 175 (945)
........... .+..+++++.++.|..+|..+++.+.......... ...... +..+++++.+|.|..+|..
T Consensus 131 ~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 131 VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 32221111122 24578888899999999999999887765432211 112222 4567778889999999999
Q ss_pred CCeeeeeecccCCCCCCCCCCceEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEE
Q 002266 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSP--DGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253 (945)
Q Consensus 176 t~~~i~~~~~~~~~~~~~~~~i~~l~~sp--dg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~La 253 (945)
+++.+.......+........+..+...| .+..+++++.++.+..+|..+++.+..... .....+.. ++..|+
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~---~~~~~~~~--~~~~l~ 281 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL---GSVNDFIV--DGNRIY 281 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC---CCEEEEEE--ETTEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC---CCCCCceE--ECCEEE
Confidence 99887766532111000000000001111 356778888899999999999998877653 23444443 466788
Q ss_pred EEECCCeEEEEECCCCeeeeecc-C-CCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCC
Q 002266 254 TSSLDRQILIWDVGKKLDIDRQK-F-DDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSS 312 (945)
Q Consensus 254 sgs~Dg~I~IWD~~~~~~i~~~~-~-~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~ 312 (945)
.++.++.|..+|..+++.+.... . ...+..... .+..|++++.+|.|.+||...+..
T Consensus 282 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp EEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE
T ss_pred EEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcE
Confidence 88889999999999998876543 2 122333333 256888999999999999877654
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=1.4e-09 Score=122.12 Aligned_cols=252 Identities=7% Similarity=0.016 Sum_probs=166.1
Q ss_pred EEEECCCCCEEEEEEc---------CCCeEEEEcCCCCcccccccccc-------ccceEEEEEecCCCEEEEEEc--CC
Q 002266 22 SILWDQQAHHLVTASS---------SETTISIHDPLLPSNLPKILRHH-------RDGVTALALSPNSTCLASGSI--DH 83 (945)
Q Consensus 22 svafspdg~~L~t~g~---------~dg~V~IWd~~~~~~~~~~l~~h-------~~~V~~la~spdg~~Lasgs~--Dg 83 (945)
.++++|||++++++.. .++.|.+||..+... ...+..+ ......++++|||++|+++.. ..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v-v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~ 147 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP-IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE-EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCC
Confidence 6899999999998852 368999999988743 3343322 123568999999999999875 35
Q ss_pred cEEE--EEcCCCeeeeecccCCCCEEEEEEecCC-CEEEEEECCCcEEEEEcCC-----CeEEE----EEecCCCCEEEE
Q 002266 84 SVKL--YKFPGGEFQTNITRFTLPIRVLAFNKSG-SMLAAAGDDEGIKLINTID-----GSIAR----VLKGHKGPVTGL 151 (945)
Q Consensus 84 ~V~i--wdl~~g~~~~~l~~~~~~V~~l~fspdg-~~Lasgs~Dg~I~iwd~~~-----~~~~~----~l~~h~~~V~~l 151 (945)
.|.+ +|..+ ...+.. ... ..+.|++ ..+++.+.|+.+.+.++.+ ++... .+.....+.
T Consensus 148 ~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--- 217 (368)
T 1mda_H 148 AAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--- 217 (368)
T ss_dssp EEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---
T ss_pred eEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---
Confidence 7888 88766 333321 111 1233444 3445566788888888876 33221 111123343
Q ss_pred EEccCCCEEEEEeCCCcEEEEEccCCe--eeeeecccCC---CCCCCCCCceEEEEcCCCCEEEEEeC-C--------Ce
Q 002266 152 AFDPNSEYLASIDSIGTVIYWELQSGR--ELHNLKRVAP---DIGSDPSSMNVLSWSPDGETLAVPGL-K--------ND 217 (945)
Q Consensus 152 afspdg~~Las~s~Dg~I~iwDl~t~~--~i~~~~~~~~---~~~~~~~~i~~l~~spdg~~La~gs~-d--------g~ 217 (945)
. .+++..++..+. +.|.+.|+.... .+..+..... ...........++++|+|+.++++.. . +.
T Consensus 218 ~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 218 Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 3 566666665566 999999986542 2222211000 00001122223789999998887643 2 36
Q ss_pred EEEEECCCCcEEEeecCCCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEECCCCeeeeeccCCCCeeEEEEec
Q 002266 218 VVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGK-YMATSS-LDRQILIWDVGKKLDIDRQKFDDRICCMAWKP 288 (945)
Q Consensus 218 I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~-~Lasgs-~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~sp 288 (945)
+.++|+.+.+.+..+.. ......++|+|+|+ ++++.. .++.|.|+|+.+++.+..+.......++++.+
T Consensus 296 ~~ViD~~t~~vv~~i~v--g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 296 TSSVTASVGQTSGPISN--GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEEEESSSCCEEECCEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred EEEEECCCCeEEEEEEC--CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence 77999999999888864 23688899999998 456666 58999999999999999988777788887765
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.05 E-value=2.7e-08 Score=112.66 Aligned_cols=231 Identities=13% Similarity=0.049 Sum_probs=157.3
Q ss_pred EC--CCCCEEEEEEcCCCeEEEEcCCCCcccc---cccc------c-cccceEEEEEecCCCEEEEEEcC------CcEE
Q 002266 25 WD--QQAHHLVTASSSETTISIHDPLLPSNLP---KILR------H-HRDGVTALALSPNSTCLASGSID------HSVK 86 (945)
Q Consensus 25 fs--pdg~~L~t~g~~dg~V~IWd~~~~~~~~---~~l~------~-h~~~V~~la~spdg~~Lasgs~D------g~V~ 86 (945)
++ +++++|++.+..+++|.|+|+.+....+ .++. . .......+.++|+| +++++..+ |.|.
T Consensus 89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 37 8999999999899999999986542222 2221 1 11245667888999 77766555 7899
Q ss_pred EEEcCCCeeeeecccCCC---CEEEEEEecCCCEEEEEE-------------------CCCcEEEEEcCCCeEEEEEecC
Q 002266 87 LYKFPGGEFQTNITRFTL---PIRVLAFNKSGSMLAAAG-------------------DDEGIKLINTIDGSIARVLKGH 144 (945)
Q Consensus 87 iwdl~~g~~~~~l~~~~~---~V~~l~fspdg~~Lasgs-------------------~Dg~I~iwd~~~~~~~~~l~~h 144 (945)
++|..+++.+..+..... --..+.|+|+++.+++.. ....|.+||+.+++.+.++...
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 999999998887763322 234688999999888874 3678999999998888877643
Q ss_pred C--CCEEEEEE--ccCCCEEEEEe------CCCcEEEEEccCCee--eeeecccCC----CC-------CCCCCCceEEE
Q 002266 145 K--GPVTGLAF--DPNSEYLASID------SIGTVIYWELQSGRE--LHNLKRVAP----DI-------GSDPSSMNVLS 201 (945)
Q Consensus 145 ~--~~V~~laf--spdg~~Las~s------~Dg~I~iwDl~t~~~--i~~~~~~~~----~~-------~~~~~~i~~l~ 201 (945)
. .....+.| +|+++++++++ .+++|.+|....+.. ...+..... .+ .........+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 1 23456666 99999888776 456888877665431 111110000 00 00023456799
Q ss_pred EcCCCCEEEEEeC-CCeEEEEECCC---CcEEEeecCCC-------------CCCeEEEEEcCCCCEEEEEE
Q 002266 202 WSPDGETLAVPGL-KNDVVMYDRDT---AEKLFSLRGDH-------------VQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 202 ~spdg~~La~gs~-dg~I~vwD~~t---~~~~~~~~~~h-------------~~~I~~l~fSpdg~~Lasgs 256 (945)
++|||++|.++.. .+.|.+||+.. .+.+..+.... .+.-..++++|+|++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999988776 67999999853 34454443310 01357799999999999887
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.01 E-value=2.4e-12 Score=145.46 Aligned_cols=256 Identities=13% Similarity=0.042 Sum_probs=143.6
Q ss_pred CCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCC-CE
Q 002266 28 QAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTL-PI 106 (945)
Q Consensus 28 dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~-~V 106 (945)
++..+++++ .|+.|+.||..++.. ...+.. +.+.+..+..++..+++++.||.|+.||..+|+....+..+.. .+
T Consensus 8 ~~~~v~~gs-~dg~v~a~d~~tG~~-~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVST-LDGSLHAVSKRTGSI-KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEE-TTSEEEEEETTTCCE-EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEc-CCCEEEEEECCCCCE-EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 577788876 899999999988754 333333 4555555666777888888999999999988876544432210 00
Q ss_pred E-EEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecc
Q 002266 107 R-VLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR 185 (945)
Q Consensus 107 ~-~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~ 185 (945)
. ...+. .+..+++++.++.|+.||..+|+.+..+..+. ...++|++..+++++.++.|+.||..+++.+..+..
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 0 00111 34567888889999999999999887776543 234567888899999999999999999987665532
Q ss_pred cCCCCCCCCCCceEEEEcCCC---CEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEE-EEEcCCCCEE----EEEEC
Q 002266 186 VAPDIGSDPSSMNVLSWSPDG---ETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICF-LSWSPNGKYM----ATSSL 257 (945)
Q Consensus 186 ~~~~~~~~~~~i~~l~~spdg---~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~-l~fSpdg~~L----asgs~ 257 (945)
.. ....++..+. ..+++++.+|.|+.||..+++.+..+.. ..++.. ..++++|... +.+
T Consensus 159 ~~---------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~~pv~~~~~~~~dg~~~v~~~~~~-- 225 (369)
T 2hz6_A 159 FD---------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY--ASPVVAFYVWQREGLRKVMHINVA-- 225 (369)
T ss_dssp EE---------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC--SSCEEEEEECTTSSCEEECCEEEE--
T ss_pred cc---------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC--CCceEEEEEecCCceEeccceeec--
Confidence 11 0112223321 4567788899999999999998877753 345543 4455666432 122
Q ss_pred CCeEEEEECCCCe----eeeeccCCCCeeEEEEec--CCCEEEEEEcCCeEEEEecCC
Q 002266 258 DRQILIWDVGKKL----DIDRQKFDDRICCMAWKP--IGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 258 Dg~I~IWD~~~~~----~i~~~~~~~~V~~la~sp--dg~~Las~s~DG~I~iWd~~~ 309 (945)
++.++.+|..+++ .+-.......+. +| .+..|++++.+|.|+.++...
T Consensus 226 ~~~l~~ld~~tG~~~~~~~W~~~~~~~~~----sp~~~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 226 VETLRYLTFMSGEVGRITKWKYPFPKETE----AKSKLTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCCCCHHH----HHHHSEEEECBEECSSCEECCEEEE
T ss_pred ccceeeeehhcCCcccceeeeeccCcccc----ccccccceEEEecccCCEEecCccc
Confidence 4456666766665 333333333221 22 345788899999999988764
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.01 E-value=1.8e-08 Score=123.16 Aligned_cols=266 Identities=11% Similarity=0.100 Sum_probs=171.7
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCccccccccc-cccceEEEEEec---CCCEEEEEE------cCCcEEEEEcCCCeeeee
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRH-HRDGVTALALSP---NSTCLASGS------IDHSVKLYKFPGGEFQTN 98 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~-h~~~V~~la~sp---dg~~Lasgs------~Dg~V~iwdl~~g~~~~~ 98 (945)
+..|++++ .|+.|..+|..++..+...-.. +......+..+| ++ .+++++ .+|.|+.||..+|+.+..
T Consensus 121 ~g~v~v~~-~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 121 KGKVYVGV-LDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TTEEEEEC-TTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEc-cCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 45666665 7999999999887544332221 111111111112 44 444443 368999999999987755
Q ss_pred cccCC-------------------------------CCEEEEEEecCCCEEEEEECCCc-------------------EE
Q 002266 99 ITRFT-------------------------------LPIRVLAFNKSGSMLAAAGDDEG-------------------IK 128 (945)
Q Consensus 99 l~~~~-------------------------------~~V~~l~fspdg~~Lasgs~Dg~-------------------I~ 128 (945)
+.... .....+++.|++.++++++.++. |.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 43210 01125788898899999887753 99
Q ss_pred EEEcCCCeEEEEEec--CC-------CCEEEEEEccCCC---EEEEEeCCCcEEEEEccCCeeeeeecccCCC-------
Q 002266 129 LINTIDGSIARVLKG--HK-------GPVTGLAFDPNSE---YLASIDSIGTVIYWELQSGRELHNLKRVAPD------- 189 (945)
Q Consensus 129 iwd~~~~~~~~~l~~--h~-------~~V~~lafspdg~---~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~------- 189 (945)
.+|..+|+.+..+.. |. .++.......+|+ .++.++.+|.++++|..+|+.+.........
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEET
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCc
Confidence 999999998887764 21 1222222223565 7888999999999999999887443211100
Q ss_pred --------------CCC-----------CCCCceEEEEcCCCCEEEEEeC------------------------------
Q 002266 190 --------------IGS-----------DPSSMNVLSWSPDGETLAVPGL------------------------------ 214 (945)
Q Consensus 190 --------------~~~-----------~~~~i~~l~~spdg~~La~gs~------------------------------ 214 (945)
... .......++++|+..+++++..
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGM 438 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECC
T ss_pred cCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccc
Confidence 000 0001123788998888777532
Q ss_pred ---------------CCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCC
Q 002266 215 ---------------KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDD 279 (945)
Q Consensus 215 ---------------dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~ 279 (945)
+|.|+.||+.+++.+..+.. ..++..-.++..|.++++++.||.|+.||.++++.+.......
T Consensus 439 ~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 439 MPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY--VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp CCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cCcccccCCCCCCCcceeEEEEECCCCCeEeEccC--CCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 37799999999999888764 2333334566678899999999999999999999997765433
Q ss_pred C--eeEEEEecCCC-EEEEEEc
Q 002266 280 R--ICCMAWKPIGN-ALAVIDV 298 (945)
Q Consensus 280 ~--V~~la~spdg~-~Las~s~ 298 (945)
. ..-+.|..+|+ ++++.+.
T Consensus 517 ~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp CCCSCCEEEEETTEEEEEEEEC
T ss_pred CcccCceEEEECCEEEEEEEec
Confidence 3 24477788887 4444433
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.99 E-value=6.7e-08 Score=108.48 Aligned_cols=258 Identities=9% Similarity=0.049 Sum_probs=165.9
Q ss_pred CCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCE-
Q 002266 28 QAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPI- 106 (945)
Q Consensus 28 dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V- 106 (945)
++..+++++ .++.|..+|..++.... ............... +..+++++.++.|..+|..+|+............
T Consensus 102 ~~~~v~v~~-~~g~l~a~d~~tG~~~W-~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 102 SGGHVYIGS-EKAQVYALNTSDGTVAW-QTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp ETTEEEEEE-TTSEEEEEETTTCCEEE-EEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC----
T ss_pred eCCEEEEEc-CCCEEEEEECCCCCEEE-EEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCcee
Confidence 345566665 78999999988775332 222211111111122 3477788889999999999998776554322111
Q ss_pred ----EEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCC-------EEEEEEcc--CCCEEEEEeCCCcEEEEE
Q 002266 107 ----RVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGP-------VTGLAFDP--NSEYLASIDSIGTVIYWE 173 (945)
Q Consensus 107 ----~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~-------V~~lafsp--dg~~Las~s~Dg~I~iwD 173 (945)
...... +..+++++.++.|..+|..+++........... +..+...| .+..+++++.+|.+..+|
T Consensus 178 ~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 178 LRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALD 255 (376)
T ss_dssp -CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEE
T ss_pred ecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEE
Confidence 112222 456888888999999999999887766532110 00011111 246777888899999999
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEE
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMA 253 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~La 253 (945)
..+++.+..... .....+.. ++..+++++.++.|..+|..+++.+..........+..... .+..|+
T Consensus 256 ~~tG~~~w~~~~---------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~ 322 (376)
T 3q7m_A 256 LRSGQIMWKREL---------GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLV 322 (376)
T ss_dssp TTTCCEEEEECC---------CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEE
T ss_pred CCCCcEEeeccC---------CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEE
Confidence 999987765532 11223333 46778888889999999999999887765212222332333 356788
Q ss_pred EEECCCeEEEEECCCCeeeeeccC-CCCeeE-EEEecCCCEEEEEEcCCeEEEEe
Q 002266 254 TSSLDRQILIWDVGKKLDIDRQKF-DDRICC-MAWKPIGNALAVIDVMGKYGVWE 306 (945)
Q Consensus 254 sgs~Dg~I~IWD~~~~~~i~~~~~-~~~V~~-la~spdg~~Las~s~DG~I~iWd 306 (945)
.++.+|.|.++|..+++.+..... ...+.. ... .+..|++++.+|.|+.|+
T Consensus 323 v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 888899999999999998876544 233322 222 255888999999999986
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.99 E-value=3.2e-08 Score=120.56 Aligned_cols=263 Identities=9% Similarity=0.066 Sum_probs=174.3
Q ss_pred CCCEEEEEEcCCCeEEEEcCCCCcccccccccc-c----cceEEEEEecCCCEEEEEEc------CCcEEEEEcCCCeee
Q 002266 28 QAHHLVTASSSETTISIHDPLLPSNLPKILRHH-R----DGVTALALSPNSTCLASGSI------DHSVKLYKFPGGEFQ 96 (945)
Q Consensus 28 dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h-~----~~V~~la~spdg~~Lasgs~------Dg~V~iwdl~~g~~~ 96 (945)
++..|++++ .++.|..+|..++..+.. +..+ . ..+.+--.. .+..+++++. +|.|+.||..+|+.+
T Consensus 127 ~~~~v~v~~-~dg~l~alD~~tG~~~W~-~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 127 WKGKVYVGA-WDGRLIALDAATGKEVWH-QNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTEEEEEC-TTSEEEEEETTTCCEEEE-EETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEc-CCCEEEEEECCCCCEEee-ecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 355677665 789999999988754332 2222 1 112111111 2345555543 689999999999877
Q ss_pred eecccCCC--------------------------------CEEEEEEecCCCEEEEEECCC-------------------
Q 002266 97 TNITRFTL--------------------------------PIRVLAFNKSGSMLAAAGDDE------------------- 125 (945)
Q Consensus 97 ~~l~~~~~--------------------------------~V~~l~fspdg~~Lasgs~Dg------------------- 125 (945)
..+..... ....+++.+++..+++++.++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 65543211 113578889889998887664
Q ss_pred cEEEEEcCCCeEEEEEec--CC-------CCEEEEEEccCC---CEEEEEeCCCcEEEEEccCCeeeeeecccCCC----
Q 002266 126 GIKLINTIDGSIARVLKG--HK-------GPVTGLAFDPNS---EYLASIDSIGTVIYWELQSGRELHNLKRVAPD---- 189 (945)
Q Consensus 126 ~I~iwd~~~~~~~~~l~~--h~-------~~V~~lafspdg---~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~---- 189 (945)
.|..+|..+++.+..+.. |. .....+....+| ..+++++.+|.|+++|..+|+.+..+......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 499999999998877664 21 122223334467 67899999999999999999887765421100
Q ss_pred C--C------------C----------CCCCceEEEEcCCCCEEEEEeCC------------------------------
Q 002266 190 I--G------------S----------DPSSMNVLSWSPDGETLAVPGLK------------------------------ 215 (945)
Q Consensus 190 ~--~------------~----------~~~~i~~l~~spdg~~La~gs~d------------------------------ 215 (945)
+ . . ....-..++++|++.+++++..+
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 0 0 0 00011257889988888876431
Q ss_pred -------------CeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCC--
Q 002266 216 -------------NDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDR-- 280 (945)
Q Consensus 216 -------------g~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~-- 280 (945)
+.|..||+.+++.+..+.. ..++....++..+.+++.++.||.+++||..+++.+..+.....
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~ 521 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVV 521 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcc
Confidence 7899999999998887753 34455556677888888999999999999999999988654432
Q ss_pred eeEEEEecCCCEEEE
Q 002266 281 ICCMAWKPIGNALAV 295 (945)
Q Consensus 281 V~~la~spdg~~Las 295 (945)
..-+.|..+|+.+++
T Consensus 522 ~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 522 AAPSTYMVDGRQYVS 536 (677)
T ss_dssp SCCEEEEETTEEEEE
T ss_pred cCCEEEEeCCEEEEE
Confidence 345667788874443
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=2e-07 Score=105.68 Aligned_cols=221 Identities=10% Similarity=0.072 Sum_probs=151.9
Q ss_pred cCCCEEEEE-EcCCcEEEEEcCCC----eeeeecc------cCC-CCEEEEEEecCCCEEEEEECC------CcEEEEEc
Q 002266 71 PNSTCLASG-SIDHSVKLYKFPGG----EFQTNIT------RFT-LPIRVLAFNKSGSMLAAAGDD------EGIKLINT 132 (945)
Q Consensus 71 pdg~~Lasg-s~Dg~V~iwdl~~g----~~~~~l~------~~~-~~V~~l~fspdg~~Lasgs~D------g~I~iwd~ 132 (945)
.++++|++. ..++.|.++|+.+. +....+. ... .....+.++|+| +++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 778777764 46789999998654 4445442 111 234567888999 66666555 68999999
Q ss_pred CCCeEEEEEecCC---CCEEEEEEccCCCEEEEEe-------------------CCCcEEEEEccCCeeeeeecccCCCC
Q 002266 133 IDGSIARVLKGHK---GPVTGLAFDPNSEYLASID-------------------SIGTVIYWELQSGRELHNLKRVAPDI 190 (945)
Q Consensus 133 ~~~~~~~~l~~h~---~~V~~lafspdg~~Las~s-------------------~Dg~I~iwDl~t~~~i~~~~~~~~~~ 190 (945)
.+.+.+.++.... ..-..+.|+|+++.++++. .+.+|.+||+.+++.+.++....
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~--- 248 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE--- 248 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT---
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC---
Confidence 9999998886332 2245688999999888885 36799999999987777665311
Q ss_pred CCCCCCceEEEE--cCCCCEEEEEe------CCCeEEEEECCCCc--EEEe--ecCC---C------------CCCeEEE
Q 002266 191 GSDPSSMNVLSW--SPDGETLAVPG------LKNDVVMYDRDTAE--KLFS--LRGD---H------------VQPICFL 243 (945)
Q Consensus 191 ~~~~~~i~~l~~--spdg~~La~gs------~dg~I~vwD~~t~~--~~~~--~~~~---h------------~~~I~~l 243 (945)
.......+.| +|+|+++++++ .++.|.+|....+. .... +... . ......+
T Consensus 249 --~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 249 --ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp --TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred --CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 1122344555 99999988877 45688776655432 1111 1110 0 2457789
Q ss_pred EEcCCCCEEEEEEC-CCeEEEEECCC---CeeeeeccCC---------------CCeeEEEEecCCCEEEEEE
Q 002266 244 SWSPNGKYMATSSL-DRQILIWDVGK---KLDIDRQKFD---------------DRICCMAWKPIGNALAVID 297 (945)
Q Consensus 244 ~fSpdg~~Lasgs~-Dg~I~IWD~~~---~~~i~~~~~~---------------~~V~~la~spdg~~Las~s 297 (945)
.+||||++|+++.. .+.|.+||+.. .+.+..+... .....++++|+|++|+++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999999988765 68999999853 3444443332 1368899999999999886
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.94 E-value=8.2e-07 Score=94.67 Aligned_cols=251 Identities=13% Similarity=0.027 Sum_probs=156.6
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCcccc----ccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCCCeeeeecccCC
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLP----KILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPGGEFQTNITRFT 103 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~----~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~g~~~~~l~~~~ 103 (945)
|++|+.+. .+.|+.+++....... ..+......+..++|++++..|+.+. ..+.|.++++..+.....+....
T Consensus 1 ~~~l~~~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 1 GTHLLFAQ--TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp CEEEEEEE--EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred CcEEEEEc--CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 45666664 3478888865432110 11222234578999999766665554 56899999987654333332223
Q ss_pred CCEEEEEEecCCCEEEEEE-CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC---CCcEEEEEccCCee
Q 002266 104 LPIRVLAFNKSGSMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS---IGTVIYWELQSGRE 179 (945)
Q Consensus 104 ~~V~~l~fspdg~~Lasgs-~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~---Dg~I~iwDl~t~~~ 179 (945)
.....+++.+++..|+++. ..+.|.++++..................++++|++..|+.+.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~- 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN- 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence 4678999999766666554 4678999998644322222222256789999997666665554 3678888875432
Q ss_pred eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECC
Q 002266 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258 (945)
Q Consensus 180 i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D 258 (945)
...+.. ........+++++++..|+++. ..+.|.++|.........+.. ......++.. .+.++++....
T Consensus 158 ~~~~~~------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~--~~~P~gi~~d-~~~lyva~~~~ 228 (267)
T 1npe_A 158 RRILAQ------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG--LQYPFAVTSY-GKNLYYTDWKT 228 (267)
T ss_dssp CEEEEC------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC--CCSEEEEEEE-TTEEEEEETTT
T ss_pred cEEEEE------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC--CCCceEEEEe-CCEEEEEECCC
Confidence 222211 1123467899999877666554 467899999975543333332 2234566654 34444444456
Q ss_pred CeEEEEECCCCeeeeeccCCC--CeeEEEEecCCC
Q 002266 259 RQILIWDVGKKLDIDRQKFDD--RICCMAWKPIGN 291 (945)
Q Consensus 259 g~I~IWD~~~~~~i~~~~~~~--~V~~la~spdg~ 291 (945)
+.|.++|..+++.+..+.... ...++++.|++.
T Consensus 229 ~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 229 NSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 899999999998887765432 578888988864
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=3.7e-08 Score=109.59 Aligned_cols=224 Identities=13% Similarity=0.082 Sum_probs=148.1
Q ss_pred cceEEEEEecCCCEEEEEE--cCCcEEEEEcCCCeeeeec-------ccCCCCEEEEEEecCCCEEEEEEC-----CCcE
Q 002266 62 DGVTALALSPNSTCLASGS--IDHSVKLYKFPGGEFQTNI-------TRFTLPIRVLAFNKSGSMLAAAGD-----DEGI 127 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs--~Dg~V~iwdl~~g~~~~~l-------~~~~~~V~~l~fspdg~~Lasgs~-----Dg~I 127 (945)
..+..++++++|+++++.. .++.++||.+.+++.. .+ ..+-..+..+++.++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5789999999999988864 2343555555456533 12 123457899999999876665443 5789
Q ss_pred EEEEcCCCeEEEEEecC------CCCEEEEEEccCCCEE-EEEe---CCCcEEEEEccCCeeeeeecccCCCCCCCCCCc
Q 002266 128 KLINTIDGSIARVLKGH------KGPVTGLAFDPNSEYL-ASID---SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSM 197 (945)
Q Consensus 128 ~iwd~~~~~~~~~l~~h------~~~V~~lafspdg~~L-as~s---~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i 197 (945)
.+||+.+++.+..+... ...+..+++++++..+ ++.. .++.|.+||+.+++....+..+. .... ..
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~-~~~~--~~- 171 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP-GIAP--ED- 171 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT-TTSC--CS-
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC-cccc--cc-
Confidence 99999999877666532 2456899999865554 4444 57899999998887655543211 0100 01
Q ss_pred eEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCC-eEEEEECC---CCee--
Q 002266 198 NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDR-QILIWDVG---KKLD-- 271 (945)
Q Consensus 198 ~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg-~I~IWD~~---~~~~-- 271 (945)
..+.++|..+.+...++.+..|. ..+..++|+|+|++|+.+..++ .|+.++.. .+..
T Consensus 172 --~~~~~~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 172 --IDLVIDGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp --CCCEETTEECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred --cceeECCEEEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence 23444676666666677664442 2367899999999998887766 55555432 1110
Q ss_pred ------eeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 272 ------IDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 272 ------i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
+...........++++++|+.+++...++.|.+|+.
T Consensus 235 ~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 235 AELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp HHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred hhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 011122345678999999998888888899999997
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.91 E-value=1.6e-10 Score=130.39 Aligned_cols=195 Identities=13% Similarity=0.044 Sum_probs=115.5
Q ss_pred CCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCC-CEE-
Q 002266 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKG-PVT- 149 (945)
Q Consensus 72 dg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~-~V~- 149 (945)
++..+++++.||.|+.||..+|+....+.. ..+.+..+..++..+++++.|+.|+.||..+++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999998877664 4555555666777888888999999999998887665543211 010
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Q 002266 150 GLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL 229 (945)
Q Consensus 150 ~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~ 229 (945)
+..+. .+..+++++.++.|+.||..+|+.+..+.... ...++|++..+++++.++.|+.||..+++.+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----------ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC---------------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----------cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 01111 34567788889999999999998876654321 1345668888999999999999999999876
Q ss_pred EeecCCCCCCeEEEEEcCCC---CEEEEEECCCeEEEEECCCCeeeeeccCCCCeeE
Q 002266 230 FSLRGDHVQPICFLSWSPNG---KYMATSSLDRQILIWDVGKKLDIDRQKFDDRICC 283 (945)
Q Consensus 230 ~~~~~~h~~~I~~l~fSpdg---~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~~ 283 (945)
..+.. + .....+++.++ ..+++++.||.|+.||..+++.+.......++..
T Consensus 154 W~~~~-~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~ 207 (369)
T 2hz6_A 154 WNATY-F--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVA 207 (369)
T ss_dssp CEEEE-E--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEE
T ss_pred EeEec-c--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEE
Confidence 55432 1 11222333332 4677788899999999999988877666666543
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=5.5e-08 Score=106.42 Aligned_cols=264 Identities=11% Similarity=0.035 Sum_probs=169.9
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
..+.++...++|..++ ++ .+ |..+|. ++ .....+..+........+. +..|..++.++.|..++.. ++...
T Consensus 60 ~~~~~~~~~~~g~l~v-~t--~~-l~~~d~-~g-~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~ 130 (330)
T 3hxj_A 60 IIECRPSIGKDGTIYF-GS--DK-VYAINP-DG-TEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKW 130 (330)
T ss_dssp EEEECCEETTTTEECC-SS--CE-EEEECC-CG-GGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEE
T ss_pred CcccceEEecCCcEEE-ec--Cc-EEEECC-CC-cEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEE
Confidence 4467777777776444 32 33 888885 43 2233333222222233333 4567777888999999987 76655
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCC
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~ 177 (945)
........+.++...+++. +.+++.++.|..+|.. +.....+......+.++.+++++.+++ ++ +.|..|| .++
T Consensus 131 ~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 131 RFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDG 204 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTS
T ss_pred EEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCC
Confidence 5544444556666766766 6667788999999998 777777766666777888888887554 44 7899999 677
Q ss_pred eeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEEC
Q 002266 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSL 257 (945)
Q Consensus 178 ~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~ 257 (945)
+........ ...+.++...++|. |.+++.++.|..+|. ++..+..+.. ....+..+.+.++| .|..++.
T Consensus 205 ~~~~~~~~~-------~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~g-~l~v~t~ 273 (330)
T 3hxj_A 205 TEKWNFYAG-------YWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT-GKRIESSPVIGNTD-TIYFGSY 273 (330)
T ss_dssp CEEEEECCS-------SCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC-SSCCCSCCEECTTS-CEEEECT
T ss_pred cEEEEEccC-------CcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC-CCCccccceEcCCC-eEEEecC
Confidence 665554321 13456677888775 555667888999975 5666655543 33334445666566 4666777
Q ss_pred CCeEEEEECCCCeeeeeccC-CCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 258 DRQILIWDVGKKLDIDRQKF-DDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 258 Dg~I~IWD~~~~~~i~~~~~-~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
+|.|..+|. +++.+..... ...+.++...++|+ |.+++.+|.+.+.....
T Consensus 274 ~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 274 DGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp TCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred CCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 888999996 5665555433 34566777767775 66789999999886543
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.83 E-value=4.2e-07 Score=106.44 Aligned_cols=216 Identities=11% Similarity=0.056 Sum_probs=151.2
Q ss_pred CCCEEEEEEc-CCcEEEEEcCCCeeeeeccc-CCCCEEEEEE-e-cCCCEEEEEEC------------------CCcEEE
Q 002266 72 NSTCLASGSI-DHSVKLYKFPGGEFQTNITR-FTLPIRVLAF-N-KSGSMLAAAGD------------------DEGIKL 129 (945)
Q Consensus 72 dg~~Lasgs~-Dg~V~iwdl~~g~~~~~l~~-~~~~V~~l~f-s-pdg~~Lasgs~------------------Dg~I~i 129 (945)
||++|+.+.. ++.|.+.|+.+.++...+.- ....+..+++ + |++.++++++. ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 8888887665 46799999999998775532 2345788888 5 89999998852 357999
Q ss_pred EEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCC--------------------------------------cEEE
Q 002266 130 INTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIG--------------------------------------TVIY 171 (945)
Q Consensus 130 wd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg--------------------------------------~I~i 171 (945)
+|..+.+....+.... ....++++|+|+++++++.+. .|.|
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998888776433 456788999999999888653 3555
Q ss_pred EEccC--Cee-eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCc------------EEEeecCC
Q 002266 172 WELQS--GRE-LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAE------------KLFSLRGD 235 (945)
Q Consensus 172 wDl~t--~~~-i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~------------~~~~~~~~ 235 (945)
.|..+ ++. +..+.. .....++.++|||+++++++ .+..|.++|+.+.+ ....+.
T Consensus 259 ID~~~~~~~~~~~~Ipv--------g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-- 328 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI--------ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-- 328 (595)
T ss_dssp EECSGGGCCSSEEEEEE--------ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--
T ss_pred EeCcccCCceeEEEEec--------CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--
Confidence 55554 322 222221 12235699999999888766 47899999998653 333443
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC----------CeeeeeccCCCCe------eEEEEecCCCEEEEEEc
Q 002266 236 HVQPICFLSWSPNGKYMATSSLDRQILIWDVGK----------KLDIDRQKFDDRI------CCMAWKPIGNALAVIDV 298 (945)
Q Consensus 236 h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~----------~~~i~~~~~~~~V------~~la~spdg~~Las~s~ 298 (945)
-......++|+|+|...++.-.|++|.+||+.+ ...+........+ .++.++|||++|++...
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 345688899999994444556799999999977 4455554333222 22345789999988753
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.80 E-value=5.4e-08 Score=106.47 Aligned_cols=258 Identities=12% Similarity=0.025 Sum_probs=163.9
Q ss_pred EEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeeccc
Q 002266 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITR 101 (945)
Q Consensus 22 svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~ 101 (945)
+.....+|.. .+++ .++.|..|| .++.. ......+...+.++...++|. |..++.+ |..||. +++....+..
T Consensus 24 ~~~~d~~g~l-~v~t-~~~~l~~~d-~~g~~-~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~ 95 (330)
T 3hxj_A 24 SPILAKNGTI-YLGS-SNKNLYAIN-TDGSV-KWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDT 95 (330)
T ss_dssp CCEECTTSCE-ECSS-TTTTTEEEC-TTSCE-EESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC
T ss_pred CceEccCCeE-EEEc-CCCEEEEEC-CCCcE-EEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEEC
Confidence 4455566654 4443 678899999 65533 333333444567777777775 4444444 888885 5554433332
Q ss_pred CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeee
Q 002266 102 FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELH 181 (945)
Q Consensus 102 ~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~ 181 (945)
.........+. +..|.+++.++.|..+|.. +........+...+.++...+++. |+.++.++.|..||.. ++...
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp -----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE
Confidence 22222233333 5667888888999999988 777766666666677777877776 5557778999999988 76655
Q ss_pred eecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeE
Q 002266 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQI 261 (945)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I 261 (945)
.+... ...+.++...++|..+ +++ +.|..|| .+++.+..+.. ....+.++...++|. |..++.++.|
T Consensus 171 ~~~~~-------~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~-l~v~t~~~gl 237 (330)
T 3hxj_A 171 RFKTN-------DAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYA-GYWTVTRPAISEDGT-IYVTSLDGHL 237 (330)
T ss_dssp EEECS-------SCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECC-SSCCCSCCEECTTSC-EEEEETTTEE
T ss_pred EEecC-------CCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEcc-CCcceeceEECCCCe-EEEEcCCCeE
Confidence 55421 1234556777777744 444 8899999 77777766654 445678888888875 4556667888
Q ss_pred EEEECCCCeeeeeccC-CCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 262 LIWDVGKKLDIDRQKF-DDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 262 ~IWD~~~~~~i~~~~~-~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
..+|. ++..+..... ...+.++...+++ .|.+++.+|.|..++.
T Consensus 238 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 238 YAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp EEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred EEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC
Confidence 88875 4444443332 2334455555555 5777888888988874
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.79 E-value=3.9e-06 Score=89.30 Aligned_cols=220 Identities=13% Similarity=0.065 Sum_probs=142.7
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCCCeeee
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~g~~~~ 97 (945)
.+..++|++++..|+.+....+.|.+++..... ....+.........+++++++..|+.+. ..+.|.++++.......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 467899999888888887678899999976542 2222222235678999999766555544 56789999986433222
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEEC---CCcEEEEEcCCCeEEEEE-ecCCCCEEEEEEccCCCEEEEEe-CCCcEEEE
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGD---DEGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASID-SIGTVIYW 172 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~---Dg~I~iwd~~~~~~~~~l-~~h~~~V~~lafspdg~~Las~s-~Dg~I~iw 172 (945)
.+.........++++|++..|.++.. .+.|..+++.... ...+ .........+++++++..|+.+. ..+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 22222246789999997676666654 3678888875432 2233 23335678999999877665554 56789999
Q ss_pred EccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCC
Q 002266 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGK 250 (945)
Q Consensus 173 Dl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~ 250 (945)
|+........+.. ......++.. +..|+++. ..+.|.++|..+++.+..+..........+++.|++.
T Consensus 195 ~~~g~~~~~~~~~--------~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 195 NPAQPGRRKVLEG--------LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ETTEEEEEEEEEC--------CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred ecCCCceEEEecC--------CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9875433222211 1223456554 45555554 5689999999999988887642223467788888764
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.78 E-value=8.2e-08 Score=112.35 Aligned_cols=219 Identities=13% Similarity=0.081 Sum_probs=153.4
Q ss_pred CCCCEEEEEEcCCCeEEEEcCCCCcccccccc-ccccceEEEEE-e-cCCCEEEEEE------------------cCCcE
Q 002266 27 QQAHHLVTASSSETTISIHDPLLPSNLPKILR-HHRDGVTALAL-S-PNSTCLASGS------------------IDHSV 85 (945)
Q Consensus 27 pdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~-~h~~~V~~la~-s-pdg~~Lasgs------------------~Dg~V 85 (945)
+||++|+++...++.|.+.|+.+.. +..++. .....+..+++ + |++.++++++ .++.|
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~-~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMK-CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTE-EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCce-EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 4899999988778899999998864 233222 22346788888 5 8999998885 24579
Q ss_pred EEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCC--------------------------------------cE
Q 002266 86 KLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE--------------------------------------GI 127 (945)
Q Consensus 86 ~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg--------------------------------------~I 127 (945)
.++|..+.+....+.-.. ....++++|+|+++++.+.+. .|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999988777765323 446678999999999988543 47
Q ss_pred EEEEcCC--CeE-EEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEEccCCee------------eeeecccCCCCC
Q 002266 128 KLINTID--GSI-ARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYWELQSGRE------------LHNLKRVAPDIG 191 (945)
Q Consensus 128 ~iwd~~~--~~~-~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwDl~t~~~------------i~~~~~~~~~~~ 191 (945)
.|+|..+ +.. +..+... ....++.++|||+++++++ .+.+|.++|+.+.+. ...+
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-------- 327 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-------- 327 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--------
T ss_pred EEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--------
Confidence 7788776 444 4444432 3457899999999887765 567999999986531 1111
Q ss_pred CCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCC----------CcEEEeecCCCCCCe-----EEEEEcCCCCEEEEEE
Q 002266 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT----------AEKLFSLRGDHVQPI-----CFLSWSPNGKYMATSS 256 (945)
Q Consensus 192 ~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t----------~~~~~~~~~~h~~~I-----~~l~fSpdg~~Lasgs 256 (945)
.-......++|+|+|...++...++.|.+||+.. .+.+.++.- |..+- ..+.++|||++|+++.
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV-~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec-ccccccceeccceEeCCCCCEEEEcC
Confidence 1123467899999994444556799999999876 455666654 33321 1224579999999886
Q ss_pred C
Q 002266 257 L 257 (945)
Q Consensus 257 ~ 257 (945)
.
T Consensus 407 k 407 (595)
T 1fwx_A 407 K 407 (595)
T ss_dssp S
T ss_pred C
Confidence 4
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.77 E-value=5.9e-07 Score=109.25 Aligned_cols=279 Identities=13% Similarity=0.102 Sum_probs=179.0
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCcccccccccccc----------ce-EEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHRD----------GV-TALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~----------~V-~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
+..|++++ .++.|.-+|..++..+.. +..... .+ ..+++ .+..+++++.|+.|..+|..+|+.+.
T Consensus 66 ~g~vyv~~-~~~~v~AlD~~tG~~~W~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSM-SWSRVIAVDAASGKELWR-YDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEE-GGGEEEEEETTTCCEEEE-ECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEC-CCCeEEEEECCCChhceE-ECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEee
Confidence 44566655 678888888877754322 211100 01 12222 24578888889999999999998776
Q ss_pred ecccCC----CCEEE-EEEecCCCEEEEEEC------CCcEEEEEcCCCeEEEEEecCC---------------------
Q 002266 98 NITRFT----LPIRV-LAFNKSGSMLAAAGD------DEGIKLINTIDGSIARVLKGHK--------------------- 145 (945)
Q Consensus 98 ~l~~~~----~~V~~-l~fspdg~~Lasgs~------Dg~I~iwd~~~~~~~~~l~~h~--------------------- 145 (945)
.+.... ..+.. ..+ .+ ..++++.. ++.|..+|..+|+.+..+....
T Consensus 142 ~~~~~~~~~~~~~~~~P~v-~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRV-VK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEECSCTTSSCBCCSCCEE-ET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeccCCCCCcceecCCCEE-EC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 554321 11111 011 13 45555543 5889999999999888775311
Q ss_pred ----------CCEEEEEEccCCCEEEEEeCCCc-------------------EEEEEccCCeeeeeecccCCCCCC--CC
Q 002266 146 ----------GPVTGLAFDPNSEYLASIDSIGT-------------------VIYWELQSGRELHNLKRVAPDIGS--DP 194 (945)
Q Consensus 146 ----------~~V~~lafspdg~~Las~s~Dg~-------------------I~iwDl~t~~~i~~~~~~~~~~~~--~~ 194 (945)
.....++++|+...++.++.++. |..+|..+++.+..+......... ..
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 01124788888888888877663 999999999988877643211100 11
Q ss_pred CCceEEEEcCCCC---EEEEEeCCCeEEEEECCCCcEEEeecCCC-----------CCC---------------------
Q 002266 195 SSMNVLSWSPDGE---TLAVPGLKNDVVMYDRDTAEKLFSLRGDH-----------VQP--------------------- 239 (945)
Q Consensus 195 ~~i~~l~~spdg~---~La~gs~dg~I~vwD~~t~~~~~~~~~~h-----------~~~--------------------- 239 (945)
.+.....+..+|+ .+++++.+|.++++|..+++.+....... ..+
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G 379 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFG 379 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTC
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcc
Confidence 2222233334665 68889999999999999999874432100 000
Q ss_pred ---eEEEEEcCCCCEEEEEE------------------------------------CCCeEEEEECCCCeeeeeccCCCC
Q 002266 240 ---ICFLSWSPNGKYMATSS------------------------------------LDRQILIWDVGKKLDIDRQKFDDR 280 (945)
Q Consensus 240 ---I~~l~fSpdg~~Lasgs------------------------------------~Dg~I~IWD~~~~~~i~~~~~~~~ 280 (945)
-..++++|+..+++... .+|.|..||+.+++.+-.......
T Consensus 380 ~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~ 459 (668)
T 1kv9_A 380 AHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH 459 (668)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS
T ss_pred ccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC
Confidence 01267788766555421 237899999999998877665555
Q ss_pred eeEEEEecCCCEEEEEEcCCeEEEEecCCCCCC
Q 002266 281 ICCMAWKPIGNALAVIDVMGKYGVWESVVPSSM 313 (945)
Q Consensus 281 V~~la~spdg~~Las~s~DG~I~iWd~~~~~~~ 313 (945)
+....+...+.+|++++.||.|+.||...+..+
T Consensus 460 ~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 460 WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 665666677889999999999999999877753
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.72 E-value=2.7e-05 Score=96.57 Aligned_cols=280 Identities=10% Similarity=0.025 Sum_probs=180.1
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeec
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI 99 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l 99 (945)
|.++...++|...+ +. .++.|..|+..+..........+...|.++...+++.+.+ |+.++-|.+|+..+++.....
T Consensus 175 i~~i~~d~~g~lwi-gt-~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GT-STDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYL 251 (795)
T ss_dssp CEEEEEEETTEEEE-EE-SSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEEC
T ss_pred eEEEEECCCCCEEE-EE-CCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEee
Confidence 88888888887555 33 4445888886554221111112346789998888876554 454444889998776654332
Q ss_pred cc-------CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEec-------CCCCEEEEEEccCCCEEEEEeC
Q 002266 100 TR-------FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKG-------HKGPVTGLAFDPNSEYLASIDS 165 (945)
Q Consensus 100 ~~-------~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~-------h~~~V~~lafspdg~~Las~s~ 165 (945)
.. ....|.++...++|.+ .+|+.+ .|.+|+..++........ ....|.++..+++|. |..|+.
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~ 328 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNRL-WIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY 328 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSCE-EEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES
T ss_pred cCCCCccccCCCeEEEEEEcCCCCE-EEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC
Confidence 21 1356999999888764 445555 589999877764433211 235799999999887 445666
Q ss_pred CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC-------CCCC
Q 002266 166 IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG-------DHVQ 238 (945)
Q Consensus 166 Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~-------~h~~ 238 (945)
++.|..|+..+..... +.............|.++...++|. |.+|+.++.|..|+..++........ -...
T Consensus 329 ~~Gl~~~~~~~~~~~~-~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 406 (795)
T 4a2l_A 329 FGGLNYYHPIRNRFKN-IRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSN 406 (795)
T ss_dssp SSCEEEECGGGGSSEE-ECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCS
T ss_pred CCCeEEeCCCcccceE-EcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCc
Confidence 7779999876553221 2111111112235688888888876 55677787899999887654332211 1235
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc-----CCCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK-----FDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~-----~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
.|.+++..++|++|..|+.++-|.+||..++....... ....|.++...++|+..+. +.+| |.+|+...
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~~G-l~~~~~~~ 480 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TLSA-LVRFNPEQ 480 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ESSC-EEEEETTT
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ecCc-eeEEeCCC
Confidence 78999999999867777777789999998876544321 2457899998888875544 4444 88887643
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.69 E-value=3.6e-06 Score=89.67 Aligned_cols=192 Identities=13% Similarity=0.082 Sum_probs=137.6
Q ss_pred EEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCC-CCEEEEEEccCCCEEEE-EeCCCcEEEEEccCCeeee
Q 002266 106 IRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHK-GPVTGLAFDPNSEYLAS-IDSIGTVIYWELQSGRELH 181 (945)
Q Consensus 106 V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~-~~V~~lafspdg~~Las-~s~Dg~I~iwDl~t~~~i~ 181 (945)
...+.|++++.++++.+. ++.|.++|+.+++.+..+.... .....++++ +..|+. .-.++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998644444443 5789999999999888875322 233456665 445544 4457899999999999888
Q ss_pred eecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCC----CCCeEEEEEcCCCCEEEEEEC
Q 002266 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDH----VQPICFLSWSPNGKYMATSSL 257 (945)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h----~~~I~~l~fSpdg~~Lasgs~ 257 (945)
.+... .. .. ..++++|+.++++..++.|.++|..+.+.+..+.-.. ...++.+.|. +|+..+....
T Consensus 101 ~i~~g----~~--~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~ 170 (266)
T 2iwa_A 101 NFTHQ----MK--DG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ 170 (266)
T ss_dssp EEECC----SS--SC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EEECC----CC--Ce---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC
Confidence 87532 01 11 3355678878777778999999999998877765311 1246788888 7765555556
Q ss_pred CCeEEEEECCCCeeeeeccCC--------------CCeeEEEEecCCCEEEE-EEcCCeEEEEecCC
Q 002266 258 DRQILIWDVGKKLDIDRQKFD--------------DRICCMAWKPIGNALAV-IDVMGKYGVWESVV 309 (945)
Q Consensus 258 Dg~I~IWD~~~~~~i~~~~~~--------------~~V~~la~spdg~~Las-~s~DG~I~iWd~~~ 309 (945)
++.|.+.|..+++++..+... ....+++|+|+++.|++ +...+.|.+-++..
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 889999999999988875542 35689999999875555 55678888888754
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.67 E-value=5.7e-06 Score=90.75 Aligned_cols=233 Identities=13% Similarity=0.048 Sum_probs=147.3
Q ss_pred ceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecc-------------------cCCCCEEEEEEecCCCEEEEEEC
Q 002266 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNIT-------------------RFTLPIRVLAFNKSGSMLAAAGD 123 (945)
Q Consensus 63 ~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~-------------------~~~~~V~~l~fspdg~~Lasgs~ 123 (945)
...+++|+++|++++++..++.|..|+..++....... .....+..+++.+++..|+++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 45678899999878888888999999877654332110 01135788999983345666655
Q ss_pred CCcEEEEEcCCCeEEEEEec-----CCCCEEEEEEcc-CCCEEEEEeC-----------------CCcEEEEEccCCeee
Q 002266 124 DEGIKLINTIDGSIARVLKG-----HKGPVTGLAFDP-NSEYLASIDS-----------------IGTVIYWELQSGREL 180 (945)
Q Consensus 124 Dg~I~iwd~~~~~~~~~l~~-----h~~~V~~lafsp-dg~~Las~s~-----------------Dg~I~iwDl~t~~~i 180 (945)
.+.|..+|..++.. ..+.. .......+++++ +|.++++... +|.|..||..+++..
T Consensus 100 ~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 56688888765532 22211 123578899999 9987666432 367888888766543
Q ss_pred eeecccCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECCCCc--EEEeecCCCCCCeEEEEEcCCCCEEEEEEC
Q 002266 181 HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRDTAE--KLFSLRGDHVQPICFLSWSPNGKYMATSSL 257 (945)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~t~~--~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~ 257 (945)
...... ...+.++|+|+|+.|+++ +..+.|.+|++.... ....+.. ..+ ...++++++|++.++...
T Consensus 179 ~~~~~~--------~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 179 LLLKEL--------HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEEEE--------SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEE
T ss_pred EeccCC--------ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecC
Confidence 222111 223569999999977666 456899999987421 1111111 123 778999999987776654
Q ss_pred ----------CCeEEEEECCCCeeeeeccCC-----CCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 258 ----------DRQILIWDVGKKLDIDRQKFD-----DRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 258 ----------Dg~I~IWD~~~~~~i~~~~~~-----~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.+.|..+|.. ++.+..+... ..++++++ .+++++++....+.|.++++.
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred cccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4678888875 5555443322 34677776 355444444567789988864
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.62 E-value=2.3e-06 Score=102.26 Aligned_cols=281 Identities=12% Similarity=0.006 Sum_probs=173.7
Q ss_pred CCEEEEEEcC-CCeEEEEcC-CCCccccccccccc----------cceEEEEEecCCCE----EEEEEcCCcEEEEEcCC
Q 002266 29 AHHLVTASSS-ETTISIHDP-LLPSNLPKILRHHR----------DGVTALALSPNSTC----LASGSIDHSVKLYKFPG 92 (945)
Q Consensus 29 g~~L~t~g~~-dg~V~IWd~-~~~~~~~~~l~~h~----------~~V~~la~spdg~~----Lasgs~Dg~V~iwdl~~ 92 (945)
+..|++++ . ++.|.-+|. .++..+.+.-.... .....++++|.+.. |++++.|+.|..+|..+
T Consensus 62 ~g~vyv~~-~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHT-SFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEEC-STTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEe-CCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 44566654 5 778888888 67653322111100 01123455443444 78888899999999999
Q ss_pred CeeeeecccCC----CCEEE-EEEecCCCEEEEEE------CCCcEEEEEcCCCeEEEEEecCCCC--------------
Q 002266 93 GEFQTNITRFT----LPIRV-LAFNKSGSMLAAAG------DDEGIKLINTIDGSIARVLKGHKGP-------------- 147 (945)
Q Consensus 93 g~~~~~l~~~~----~~V~~-l~fspdg~~Lasgs------~Dg~I~iwd~~~~~~~~~l~~h~~~-------------- 147 (945)
|+.+-...... ..+.+ ..+ .++ .+++++ .++.|+.+|..+|+.+..+......
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 98765543211 01111 111 144 455554 3789999999999988776532111
Q ss_pred -----------------------E-EEEEEccCCCEEEEEeCCC----------------cEEEEEccCCeeeeeecccC
Q 002266 148 -----------------------V-TGLAFDPNSEYLASIDSIG----------------TVIYWELQSGRELHNLKRVA 187 (945)
Q Consensus 148 -----------------------V-~~lafspdg~~Las~s~Dg----------------~I~iwDl~t~~~i~~~~~~~ 187 (945)
+ ..+++++...+++.++.++ .|..+|..+++.+..+....
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 0 1356777777888777653 79999999999887776432
Q ss_pred CCCC---CCCCCceEEEEc-CCC---CEEEEEeCCCeEEEEECCCCcEEEeecCCC------------CCCe--------
Q 002266 188 PDIG---SDPSSMNVLSWS-PDG---ETLAVPGLKNDVVMYDRDTAEKLFSLRGDH------------VQPI-------- 240 (945)
Q Consensus 188 ~~~~---~~~~~i~~l~~s-pdg---~~La~gs~dg~I~vwD~~t~~~~~~~~~~h------------~~~I-------- 240 (945)
...- ....++ .+... .+| ..++.++.+|.++++|..+++.+....... ..++
T Consensus 299 ~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 377 (599)
T 1w6s_A 299 HDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTR 377 (599)
T ss_dssp TCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCC
T ss_pred CccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCC
Confidence 2110 111111 12232 567 467778899999999999999876654211 0111
Q ss_pred ------------------EEEEEcCCCCEEEEEE---------------------------------------CCCeEEE
Q 002266 241 ------------------CFLSWSPNGKYMATSS---------------------------------------LDRQILI 263 (945)
Q Consensus 241 ------------------~~l~fSpdg~~Lasgs---------------------------------------~Dg~I~I 263 (945)
..++++|+..++++.. ..|.|..
T Consensus 378 ~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A 457 (599)
T 1w6s_A 378 MDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKA 457 (599)
T ss_dssp TTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEE
T ss_pred CCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEE
Confidence 2356777665554421 3478999
Q ss_pred EECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCCC
Q 002266 264 WDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSM 313 (945)
Q Consensus 264 WD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~~ 313 (945)
||+.+++.+-...+..++.+-.....+..+++++.||.|+.||..+++.+
T Consensus 458 ~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 458 YNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp ECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 99999988776544333332223345678888999999999999888764
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.60 E-value=0.00011 Score=91.16 Aligned_cols=276 Identities=8% Similarity=0.076 Sum_probs=176.2
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccc--------ccccceEEEEEecCCCEEEEEEcCCcEEEE
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR--------HHRDGVTALALSPNSTCLASGSIDHSVKLY 88 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~--------~h~~~V~~la~spdg~~Lasgs~Dg~V~iw 88 (945)
...|.+++..++|...+ +. .++-|..|+..+... ..... .....|.++...++|.+|..|+.++-|.+|
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt-~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~ 432 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GT-NDGGLNLYNPITQRF-TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSIL 432 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EE-SSSCEEEECTTTCCE-EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEECCCCCEEE-EE-CCCCeEEEcCCCCcE-EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEE
Confidence 46799999999988655 43 566788998765421 11110 123579999998888856677777779999
Q ss_pred EcCCCeeeeecc----cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEec------CCCCEEEEEEccCCC
Q 002266 89 KFPGGEFQTNIT----RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKG------HKGPVTGLAFDPNSE 158 (945)
Q Consensus 89 dl~~g~~~~~l~----~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~------h~~~V~~lafspdg~ 158 (945)
+..+++...... .....|.++...++|.+.+ |+. +.|.+|+..++........ ....|.++..+++|.
T Consensus 433 d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 433 HRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKR 510 (795)
T ss_dssp ETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCC
T ss_pred eCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCC
Confidence 988776543221 1245789999888877544 445 4589999887754332211 236799999999988
Q ss_pred EEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEee--cCCC
Q 002266 159 YLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL--RGDH 236 (945)
Q Consensus 159 ~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~--~~~h 236 (945)
+.+.+. +.|..||..++.. .+.............+.++...++|.+.+ ++.. .|..||..+.+....- .+-.
T Consensus 511 lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~d~~~~~~~~~~~~~gl~ 584 (795)
T 4a2l_A 511 LWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWV-GTRE-GFYCFNEKDKQIKRYNTTNGLP 584 (795)
T ss_dssp EEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECGGGTCS
T ss_pred EEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEE-EeCC-CceeECCCCCcEEEeCCCCCCc
Confidence 666544 5688999887765 22210011111234678888888888554 4444 6899998776543211 1212
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc---CC-CCe--eEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 237 VQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK---FD-DRI--CCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 237 ~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~---~~-~~V--~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
...|.++...++|++.+++ ++-|..|+..++....... .. ..+ .++...++|+ |..|+.+|. ..++.
T Consensus 585 ~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~-l~~g~~~Gl-~~~~p 657 (795)
T 4a2l_A 585 NNVVYGILEDSFGRLWLST--NRGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQ-MYFGGINGI-TTFRP 657 (795)
T ss_dssp CSCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSC-EEEEETTEE-EEECG
T ss_pred hhheEEEEECCCCCEEEEc--CCceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCe-EEEecCCce-EEEcH
Confidence 3568889999999876665 3558889998876543321 11 222 4566667775 666777774 44443
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.60 E-value=1e-05 Score=88.77 Aligned_cols=238 Identities=11% Similarity=0.036 Sum_probs=147.8
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccc------------------cccccceEEEEEec-CCCEEEEE
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKIL------------------RHHRDGVTALALSP-NSTCLASG 79 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l------------------~~h~~~V~~la~sp-dg~~Lasg 79 (945)
...+++|+++|+.++++. .++.|..|+........... ......+..+++.+ +++ |+++
T Consensus 20 ~p~~i~~d~~g~~l~v~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSV-QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEEC-TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEc-CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 355678999998777765 78899999876532111000 01123578999998 664 5555
Q ss_pred EcCCcEEEEEcCCCeeeeeccc----CCCCEEEEEEec-CCCEEEEEEC-----------------CCcEEEEEcCCCeE
Q 002266 80 SIDHSVKLYKFPGGEFQTNITR----FTLPIRVLAFNK-SGSMLAAAGD-----------------DEGIKLINTIDGSI 137 (945)
Q Consensus 80 s~Dg~V~iwdl~~g~~~~~l~~----~~~~V~~l~fsp-dg~~Lasgs~-----------------Dg~I~iwd~~~~~~ 137 (945)
...+.|..++..++........ .......+++.+ +|++.++-.. .+.|..||..++..
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 5555588888765543221111 123478899999 8876665432 36788899877764
Q ss_pred EEEEecCCCCEEEEEEccCCCEEEEE-eCCCcEEEEEccCCe--eeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC
Q 002266 138 ARVLKGHKGPVTGLAFDPNSEYLASI-DSIGTVIYWELQSGR--ELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL 214 (945)
Q Consensus 138 ~~~l~~h~~~V~~lafspdg~~Las~-s~Dg~I~iwDl~t~~--~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~ 214 (945)
...... -.....|+|+|++++|+++ +..+.|.+|++.... ....+.. . .. ...+++.++|++.++...
T Consensus 178 ~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~----~---~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 178 TLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK----I---PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE----C---SS-EEEEEECTTSCEEEEEEE
T ss_pred EEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe----C---CC-CCCeEECCCCCEEEEecC
Confidence 333222 2345679999999876655 556899999987531 1111111 1 12 567999999986666543
Q ss_pred ----------CCeEEEEECCCCcEEEeecCCC---CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q 002266 215 ----------KNDVVMYDRDTAEKLFSLRGDH---VQPICFLSWSPNGKYMATSSLDRQILIWDVGKK 269 (945)
Q Consensus 215 ----------dg~I~vwD~~t~~~~~~~~~~h---~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~ 269 (945)
.+.|..+|.. ++.+..+.... ...++.+++ .+|+++++....+.|.++++...
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred cccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 4678899875 66666554322 245666766 46666666666788999987643
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.59 E-value=4.7e-06 Score=99.35 Aligned_cols=279 Identities=9% Similarity=0.001 Sum_probs=174.5
Q ss_pred CCEEEEEEcC-CCeEEEEcC-CCCcccccccccccc---------c-eEEEEEecCCCEEEEEEcCCcEEEEEcCCCeee
Q 002266 29 AHHLVTASSS-ETTISIHDP-LLPSNLPKILRHHRD---------G-VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 29 g~~L~t~g~~-dg~V~IWd~-~~~~~~~~~l~~h~~---------~-V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~ 96 (945)
+..+++++ . ++.|.-+|. .++....+.-..... . ...+++ .+..+++++.|+.|..+|..+|+.+
T Consensus 62 ~g~vyv~~-~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 62 GDMMYVHS-AFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp TTEEEEEC-STTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEEe-CCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 44555554 5 788888888 676533221111000 0 011222 3557888888999999999999877
Q ss_pred eecccCC----CCEEE-EEEecCCCEEEEEEC------CCcEEEEEcCCCeEEEEEecCCCC------------------
Q 002266 97 TNITRFT----LPIRV-LAFNKSGSMLAAAGD------DEGIKLINTIDGSIARVLKGHKGP------------------ 147 (945)
Q Consensus 97 ~~l~~~~----~~V~~-l~fspdg~~Lasgs~------Dg~I~iwd~~~~~~~~~l~~h~~~------------------ 147 (945)
....... ..+.+ ... .+ ..+++++. ++.|..+|..+++.+..+......
T Consensus 139 W~~~~~~~~~~~~~~~~P~v-~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFV-AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEE-ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEE-EC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 5543211 01111 111 13 45566654 789999999999988776532110
Q ss_pred --------------------EEEEEEccCCCEEEEEeCC----------------CcEEEEEccCCeeeeeecccCCCC-
Q 002266 148 --------------------VTGLAFDPNSEYLASIDSI----------------GTVIYWELQSGRELHNLKRVAPDI- 190 (945)
Q Consensus 148 --------------------V~~lafspdg~~Las~s~D----------------g~I~iwDl~t~~~i~~~~~~~~~~- 190 (945)
...+++++....++.++.+ +.|..+|..+++.+..+.......
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 0235677776777766542 359999999999887765422111
Q ss_pred --CCCCCCceEEEEcCCCC---EEEEEeCCCeEEEEECCCCcEEEeecCCC------------CCCe-------------
Q 002266 191 --GSDPSSMNVLSWSPDGE---TLAVPGLKNDVVMYDRDTAEKLFSLRGDH------------VQPI------------- 240 (945)
Q Consensus 191 --~~~~~~i~~l~~spdg~---~La~gs~dg~I~vwD~~t~~~~~~~~~~h------------~~~I------------- 240 (945)
.....+ ..+...++|+ .+++++.+|.++++|..+++.+..+.... ..++
T Consensus 297 d~~~~~~p-~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 375 (571)
T 2ad6_A 297 DFAGVNQM-VLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKG 375 (571)
T ss_dssp CCCCCCCC-EEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCE
T ss_pred ccccCCCC-EEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCc
Confidence 011122 1223334774 57778889999999999999877654211 0111
Q ss_pred -------------EEEEEcCCCCEEEEEE-------------------------------------CCCeEEEEECCCCe
Q 002266 241 -------------CFLSWSPNGKYMATSS-------------------------------------LDRQILIWDVGKKL 270 (945)
Q Consensus 241 -------------~~l~fSpdg~~Lasgs-------------------------------------~Dg~I~IWD~~~~~ 270 (945)
..++++|+..+|+..+ .+|.|..||+.+++
T Consensus 376 ~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~ 455 (571)
T 2ad6_A 376 TNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK 455 (571)
T ss_dssp EEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC
T ss_pred eEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC
Confidence 2357888777666553 35789999999998
Q ss_pred eeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCCC
Q 002266 271 DIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSM 313 (945)
Q Consensus 271 ~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~~ 313 (945)
.+-.......+.+......+..+++++.||.|+.||...++.+
T Consensus 456 ~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 456 AKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 8877655544544444555678888999999999999887754
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.59 E-value=7.6e-06 Score=87.19 Aligned_cols=203 Identities=11% Similarity=0.013 Sum_probs=135.9
Q ss_pred CCEEEEEECCCCCEEEEEEc-CCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCCCee
Q 002266 18 ASFCSILWDQQAHHLVTASS-SETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPGGEF 95 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~-~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~g~~ 95 (945)
.....++|++++..+++++. .++.|+++|..++........+.......+++. +..|+.+. .++.|.++|..+++.
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 34688999998744444431 368999999988753332211111122345554 55555544 578999999999998
Q ss_pred eeecccC-CCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCC-----CCEEEEEEccCCCEEEEEeCCCcE
Q 002266 96 QTNITRF-TLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK-----GPVTGLAFDPNSEYLASIDSIGTV 169 (945)
Q Consensus 96 ~~~l~~~-~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~-----~~V~~lafspdg~~Las~s~Dg~I 169 (945)
+..+... .. ...+++||+.++++..++.|.++|..+.+....+.... ..+..+.|. +|..++....++.|
T Consensus 99 ~~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 99 IKNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 8877533 22 23466688888877778899999999988877765321 246788888 67655555567899
Q ss_pred EEEEccCCeeeeeecccCC------CCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCC
Q 002266 170 IYWELQSGRELHNLKRVAP------DIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTA 226 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~------~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~ 226 (945)
.+.|..+++.+..+..... .........+.++|+|+++.|++++ ..+.|++.++...
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999999998887764210 0011123568899999987666554 5778888887643
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.59 E-value=2e-05 Score=85.79 Aligned_cols=232 Identities=14% Similarity=0.104 Sum_probs=144.4
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCC--cEEEEEcCCCeEEE
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE--GIKLINTIDGSIAR 139 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg--~I~iwd~~~~~~~~ 139 (945)
.....++|+++|+++++-..++.|..|+.... ....+ .....+..+++.++|+++++..... .|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999987777657889999987653 33322 2345688999999999666554332 47777877776543
Q ss_pred EEec-CCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCe-eeeeeccc-CC-CCCCCCCCceEEEEcCCCCEEEEEe-C
Q 002266 140 VLKG-HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGR-ELHNLKRV-AP-DIGSDPSSMNVLSWSPDGETLAVPG-L 214 (945)
Q Consensus 140 ~l~~-h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~-~i~~~~~~-~~-~~~~~~~~i~~l~~spdg~~La~gs-~ 214 (945)
.... .......++..+++..+++...++.|+++|...+. .+...... .. .........+.+ +|++++|+++. .
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 3321 22334566666655555554468889999987653 12111110 00 000111233445 78887776654 4
Q ss_pred CCeEEEEECCC-CcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeee--eccCC-CCeeEEEEe-
Q 002266 215 KNDVVMYDRDT-AEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDID--RQKFD-DRICCMAWK- 287 (945)
Q Consensus 215 dg~I~vwD~~t-~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~--~~~~~-~~V~~la~s- 287 (945)
.+.|.+|++.. +.. ...+.. ......++++++|+++++....+.|.+++.. ++... ..... ..+++++|.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred CCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 67899999874 321 111111 1245668999999887777778899999976 44422 23322 568999998
Q ss_pred --cCCCEEEEEEcCC
Q 002266 288 --PIGNALAVIDVMG 300 (945)
Q Consensus 288 --pdg~~Las~s~DG 300 (945)
|+++.|++++..+
T Consensus 265 ~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 265 TEGDCTAIYVVTNGG 279 (306)
T ss_dssp STTTTTEEEEEECTT
T ss_pred ccCCCCEEEEECCCC
Confidence 8888888776644
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.57 E-value=4.1e-06 Score=101.82 Aligned_cols=264 Identities=11% Similarity=0.097 Sum_probs=166.3
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCccccccccccc---cceEE-EEEecCCCEEEEEEc------CCcEEEEEcCCCeeeee
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHR---DGVTA-LALSPNSTCLASGSI------DHSVKLYKFPGGEFQTN 98 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~---~~V~~-la~spdg~~Lasgs~------Dg~V~iwdl~~g~~~~~ 98 (945)
+..+++++ .++.|..+|..++..+...-.... ..+.+ ..+ .++ .++++.. +|.|..+|..+|+.+..
T Consensus 117 ~~~v~v~~-~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 117 GDKVYVGT-LDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BTEEEEEC-TTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 45566664 789999999888754333221110 11111 011 134 5555443 58999999999987765
Q ss_pred cccCC-------------------------------CCEEEEEEecCCCEEEEEECCC-------------------cEE
Q 002266 99 ITRFT-------------------------------LPIRVLAFNKSGSMLAAAGDDE-------------------GIK 128 (945)
Q Consensus 99 l~~~~-------------------------------~~V~~l~fspdg~~Lasgs~Dg-------------------~I~ 128 (945)
+.... .....+++.++...+++++.++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 53210 0112468888888888887765 399
Q ss_pred EEEcCCCeEEEEEec--CC-------CCEEEEEEccCCC---EEEEEeCCCcEEEEEccCCeeeeeecccCCC----C--
Q 002266 129 LINTIDGSIARVLKG--HK-------GPVTGLAFDPNSE---YLASIDSIGTVIYWELQSGRELHNLKRVAPD----I-- 190 (945)
Q Consensus 129 iwd~~~~~~~~~l~~--h~-------~~V~~lafspdg~---~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~----~-- 190 (945)
.+|..+++.+..+.. |. .++....+..+|+ .++.++.+|.++++|..+|+.+......... +
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 999999998887764 22 2333333334665 6888999999999999999887443221100 0
Q ss_pred -----------C--C----------CCCCceEEEEcCCCCEEEEEe----------------------------------
Q 002266 191 -----------G--S----------DPSSMNVLSWSPDGETLAVPG---------------------------------- 213 (945)
Q Consensus 191 -----------~--~----------~~~~i~~l~~spdg~~La~gs---------------------------------- 213 (945)
. . ....-..++++|+...+++..
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 0 0 000012367888766666521
Q ss_pred --CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCe--eEEEEecC
Q 002266 214 --LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRI--CCMAWKPI 289 (945)
Q Consensus 214 --~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V--~~la~spd 289 (945)
.+|.|..||+.+++.+..+.. ..+.....+...|.++++++.||.|++||..+++.+........+ .-+.+..+
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCccceEEEEeCCCCcEEEEccC--CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 237899999999998877653 223333445557788999999999999999999998876554333 23445567
Q ss_pred CC-EEEEEE
Q 002266 290 GN-ALAVID 297 (945)
Q Consensus 290 g~-~Las~s 297 (945)
|+ +++.++
T Consensus 512 G~~yva~~~ 520 (668)
T 1kv9_A 512 GRQYVAIMA 520 (668)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 76 555554
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.55 E-value=1.5e-05 Score=95.13 Aligned_cols=280 Identities=11% Similarity=0.038 Sum_probs=168.3
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCccccccccccccc---------eEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeec
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDG---------VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNI 99 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~---------V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l 99 (945)
+..+++++ .++.|.-+|..++....+ +...... ...+++ .+..+++++.++.|..+|..+|+.+-..
T Consensus 68 ~g~vyv~~-~~~~v~AlD~~tG~~~W~-~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 68 DGVIYVTA-SYSRLFALDAKTGKRLWT-YNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKK 143 (582)
T ss_dssp TTEEEEEE-TTTEEEEEESSSCCEEEE-EECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred CCEEEEEc-CCCCEEEEECCCCcEEEE-EcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeee
Confidence 34455554 434488888877754322 2211110 012222 3457788889999999999999877554
Q ss_pred ccCCC----CEE-EEEEec---CCC-EEEEEEC------CCcEEEEEcCCCeEEEEEecCCCCE----------------
Q 002266 100 TRFTL----PIR-VLAFNK---SGS-MLAAAGD------DEGIKLINTIDGSIARVLKGHKGPV---------------- 148 (945)
Q Consensus 100 ~~~~~----~V~-~l~fsp---dg~-~Lasgs~------Dg~I~iwd~~~~~~~~~l~~h~~~V---------------- 148 (945)
..... .+. ...+.. +|+ .+++++. ++.|..+|..+|+.+.........+
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 32210 111 111111 233 5666543 7889999999998877654211100
Q ss_pred -------------------------EEEEEccCCCEEEEEeC--------------------C----CcEEEEEccCCee
Q 002266 149 -------------------------TGLAFDPNSEYLASIDS--------------------I----GTVIYWELQSGRE 179 (945)
Q Consensus 149 -------------------------~~lafspdg~~Las~s~--------------------D----g~I~iwDl~t~~~ 179 (945)
..++++|...+++.+.. | +.|..+|..+++.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 13567777777776653 2 5899999999998
Q ss_pred eeeecccCCCCC---CCCCCceEEEEc-CCCC---EEEEEeCCCeEEEEECCCCcEEEeecCCCC------------CC-
Q 002266 180 LHNLKRVAPDIG---SDPSSMNVLSWS-PDGE---TLAVPGLKNDVVMYDRDTAEKLFSLRGDHV------------QP- 239 (945)
Q Consensus 180 i~~~~~~~~~~~---~~~~~i~~l~~s-pdg~---~La~gs~dg~I~vwD~~t~~~~~~~~~~h~------------~~- 239 (945)
+..+.......- ....+ ..+... .+|+ .++.++.+|.++++|..+++.+..+..... .+
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p-~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNEL-VLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCC-EEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEEEeCCCCCcccccCCCCc-EEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEe
Confidence 887654221110 01111 112222 4674 788899999999999999998866543110 00
Q ss_pred -------------------------------eEEEEEcCCCCEEEEEE--------------------------------
Q 002266 240 -------------------------------ICFLSWSPNGKYMATSS-------------------------------- 256 (945)
Q Consensus 240 -------------------------------I~~l~fSpdg~~Lasgs-------------------------------- 256 (945)
-..++++|+..++++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~ 462 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD 462 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence 01346676544444432
Q ss_pred -CCCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCCCCCC
Q 002266 257 -LDRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVVPSSM 313 (945)
Q Consensus 257 -~Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~~~~~ 313 (945)
.+|.|..||+.+++.+-......++..-.....+.++++++.||.|+.||..+++.+
T Consensus 463 ~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 463 DHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 257899999999988866544434433333345678888999999999999887754
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.54 E-value=5.3e-06 Score=87.54 Aligned_cols=179 Identities=13% Similarity=0.202 Sum_probs=128.8
Q ss_pred EEEEEEecCCCEEEEEECCC--cEEEEEcCCCeEEEEEecCCCC-EEEEEEccCCCEEEEEe-CCCcEEEEEccCCeeee
Q 002266 106 IRVLAFNKSGSMLAAAGDDE--GIKLINTIDGSIARVLKGHKGP-VTGLAFDPNSEYLASID-SIGTVIYWELQSGRELH 181 (945)
Q Consensus 106 V~~l~fspdg~~Lasgs~Dg--~I~iwd~~~~~~~~~l~~h~~~-V~~lafspdg~~Las~s-~Dg~I~iwDl~t~~~i~ 181 (945)
...+.|+ ++.++.+++.+| .|+++|+.+++.+..+...... --.+++. +..|+... .++.+.+||..+.+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEE
Confidence 4678888 677677777766 8999999999988887644322 2335543 55555444 57899999999999988
Q ss_pred eecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC-C---CCCeEEEEEcCCCCEEEEEEC
Q 002266 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD-H---VQPICFLSWSPNGKYMATSSL 257 (945)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~-h---~~~I~~l~fSpdg~~Lasgs~ 257 (945)
++.... .. ..++++++.|+++..++.|.++|..+.+.+..+.-. . -..++.+.|. +|+..+..-.
T Consensus 122 ti~~~~-----eG-----~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 122 SFNYDG-----EG-----WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp EEECSS-----CC-----CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EEECCC-----Cc-----eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc
Confidence 886421 11 233357777877766888999999999887776531 1 1345667887 7776666656
Q ss_pred CCeEEEEECCCCeeeeeccCC-------------CCeeEEEEecCCCEEEEEEc
Q 002266 258 DRQILIWDVGKKLDIDRQKFD-------------DRICCMAWKPIGNALAVIDV 298 (945)
Q Consensus 258 Dg~I~IWD~~~~~~i~~~~~~-------------~~V~~la~spdg~~Las~s~ 298 (945)
+..|.+.|..+++++..+... ...+++||+|+++.|++.+.
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 889999999999998775432 34689999999887777654
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.52 E-value=5.3e-06 Score=98.88 Aligned_cols=259 Identities=13% Similarity=0.038 Sum_probs=158.4
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCccccccc-cccc--cceEE-EEEecCCCEEEEEEc------CCcEEEEEcCCCeeeee
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKIL-RHHR--DGVTA-LALSPNSTCLASGSI------DHSVKLYKFPGGEFQTN 98 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l-~~h~--~~V~~-la~spdg~~Lasgs~------Dg~V~iwdl~~g~~~~~ 98 (945)
+..+++++ .++.|..+|..++......- ..+. ..+.+ ... .++ .+++++. ++.|..+|..+|+.+..
T Consensus 115 ~~~v~v~~-~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 115 AGQIVKKQ-ANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp TTEEEEEC-TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CCEEEEEe-CCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 45566664 78999999988875433221 1111 01211 111 134 5555554 78999999999987655
Q ss_pred cccCCCC--------------------------------------EEEEEEecCCCEEEEEECC----------------
Q 002266 99 ITRFTLP--------------------------------------IRVLAFNKSGSMLAAAGDD---------------- 124 (945)
Q Consensus 99 l~~~~~~--------------------------------------V~~l~fspdg~~Lasgs~D---------------- 124 (945)
+...... ...+++.+....++.++.+
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 4321100 0135666766677776532
Q ss_pred CcEEEEEcCCCeEEEEEecC--C--------CCEEEEEEccCCC---EEEEEeCCCcEEEEEccCCeeeeeecccCCC--
Q 002266 125 EGIKLINTIDGSIARVLKGH--K--------GPVTGLAFDPNSE---YLASIDSIGTVIYWELQSGRELHNLKRVAPD-- 189 (945)
Q Consensus 125 g~I~iwd~~~~~~~~~l~~h--~--------~~V~~lafspdg~---~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~-- 189 (945)
+.|..+|..+++.+..+... . .++. +....+|+ .++.++.+|.+.++|..+++.+.........
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 25999999999988777532 1 2221 22224674 5778889999999999999887665422100
Q ss_pred ------CCC------------------------CCCCceEEEEcCCCCEEEEEe--------------------------
Q 002266 190 ------IGS------------------------DPSSMNVLSWSPDGETLAVPG-------------------------- 213 (945)
Q Consensus 190 ------~~~------------------------~~~~i~~l~~spdg~~La~gs-------------------------- 213 (945)
... ....-..++++|+..+|++++
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 000 000012467888877777654
Q ss_pred -----------CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCee
Q 002266 214 -----------LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRIC 282 (945)
Q Consensus 214 -----------~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V~ 282 (945)
.++.|..||..+++.+.++.. ...+....+...+..++.++.||.|+.||..+++.+........+.
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~ 508 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGI 508 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcE
Confidence 247899999999998877653 2223222333356677778999999999999999988765544332
Q ss_pred --EEEEecCCCEE
Q 002266 283 --CMAWKPIGNAL 293 (945)
Q Consensus 283 --~la~spdg~~L 293 (945)
-+.+..+|+.+
T Consensus 509 ~~p~~~~~~G~~y 521 (571)
T 2ad6_A 509 GSPMTYSFKGKQY 521 (571)
T ss_dssp SCCEEEEETTEEE
T ss_pred eeeEEEEECCEEE
Confidence 23455666533
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.49 E-value=7.2e-06 Score=86.52 Aligned_cols=186 Identities=15% Similarity=0.147 Sum_probs=129.1
Q ss_pred eEEEEEecCCCEEEEEEcCC--cEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEE-CCCcEEEEEcCCCeEEEE
Q 002266 64 VTALALSPNSTCLASGSIDH--SVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAG-DDEGIKLINTIDGSIARV 140 (945)
Q Consensus 64 V~~la~spdg~~Lasgs~Dg--~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~iwd~~~~~~~~~ 140 (945)
...|.|+ ++.++.+.+.+| .|+++|+.+++....+.-. .......+.+++..|.... .++.+.+||..+.+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4788898 676667777765 8999999999988776533 3333322333455655554 578899999999999988
Q ss_pred EecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEE
Q 002266 141 LKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVM 220 (945)
Q Consensus 141 l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~v 220 (945)
+..... ...+++++..|+.+..++.|.++|..+.+.+..+..... ...-..++.+.|. +|+..+....++.|.+
T Consensus 123 i~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~--g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 123 FNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAH--GEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEET--TEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccC--CccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 875332 233345678787777678899999999888877654210 0111334567776 7765555556889999
Q ss_pred EECCCCcEEEeecCC-----------CCCCeEEEEEcCCCCEEEEEEC
Q 002266 221 YDRDTAEKLFSLRGD-----------HVQPICFLSWSPNGKYMATSSL 257 (945)
Q Consensus 221 wD~~t~~~~~~~~~~-----------h~~~I~~l~fSpdg~~Lasgs~ 257 (945)
.|..+++.+..+... .....+.++|+|+++.|...+.
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999988776531 1235688999998777766654
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.43 E-value=8.3e-06 Score=86.08 Aligned_cols=183 Identities=11% Similarity=-0.008 Sum_probs=126.9
Q ss_pred eEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEE--EEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE
Q 002266 64 VTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRV--LAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141 (945)
Q Consensus 64 V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~--l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l 141 (945)
...|.|+ ++.++++.+.+|.|+++|+.+++....+ ....... +++.. +++.+..-.++.+.+||..+.+.+.++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 4688887 3566667778889999999999988776 3333333 44432 234444446888999999999999888
Q ss_pred ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEE
Q 002266 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221 (945)
Q Consensus 142 ~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vw 221 (945)
..... -..++ ++++.|+.+..++.|.++|..+.+.+..+...... ..-..++.+.|. +|+.++....++.|.+.
T Consensus 133 ~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g--~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 133 RYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRG--QPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp ECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETT--EECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred eCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCC--cccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 75322 23444 56888888888899999999999888777542211 111345667777 77655555568899999
Q ss_pred ECCCCcEEEeecCC------------CCCCeEEEEEcCCCCEEEEEE
Q 002266 222 DRDTAEKLFSLRGD------------HVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 222 D~~t~~~~~~~~~~------------h~~~I~~l~fSpdg~~Lasgs 256 (945)
|..+++.+..+.-. ...-.+.++|+|+++.|+..+
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999987766531 123568899999765554444
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.43 E-value=1.3e-05 Score=98.89 Aligned_cols=155 Identities=10% Similarity=0.035 Sum_probs=98.6
Q ss_pred CEEEEEEC-CCCCEEEEEEcCCC----eEEEEcCCCC-ccccccccccccceEEEEEecCCCEEEEEEcC-----CcEEE
Q 002266 19 SFCSILWD-QQAHHLVTASSSET----TISIHDPLLP-SNLPKILRHHRDGVTALALSPNSTCLASGSID-----HSVKL 87 (945)
Q Consensus 19 ~V~svafs-pdg~~L~t~g~~dg----~V~IWd~~~~-~~~~~~l~~h~~~V~~la~spdg~~Lasgs~D-----g~V~i 87 (945)
.+...+|| |||++|+.+...+| .|+++|+.++ ......+. .....++|+|||+.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99999998754443 5999998876 43222222 123468999999888877765 35888
Q ss_pred EEcCCCeee--eecc-cCCCCEEEEEEecCCCEEEEEECC---CcEEEEEcCCCe-EE--EEE-ecCCCCEEEEEEccCC
Q 002266 88 YKFPGGEFQ--TNIT-RFTLPIRVLAFNKSGSMLAAAGDD---EGIKLINTIDGS-IA--RVL-KGHKGPVTGLAFDPNS 157 (945)
Q Consensus 88 wdl~~g~~~--~~l~-~~~~~V~~l~fspdg~~Lasgs~D---g~I~iwd~~~~~-~~--~~l-~~h~~~V~~lafspdg 157 (945)
+++.+++.. ..+. ........+.|+|||++|+..+.. ..|+++|+.++. .. ..+ ........++.|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 888766422 1222 122346678999999998887643 358889987752 12 333 3344555666665444
Q ss_pred CEEEEEeCC--C--cEEEEEccC
Q 002266 158 EYLASIDSI--G--TVIYWELQS 176 (945)
Q Consensus 158 ~~Las~s~D--g--~I~iwDl~t 176 (945)
.+++.+..+ + .|..+++.+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEEEeCCCCCCCcEEEEEcCCC
Confidence 444454443 2 566667654
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.40 E-value=7.4e-05 Score=81.24 Aligned_cols=226 Identities=13% Similarity=0.063 Sum_probs=137.9
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCC--cEEEEEcCCCee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDH--SVKLYKFPGGEF 95 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg--~V~iwdl~~g~~ 95 (945)
.....++|+++|+.+++- ..++.|..||.... ....+ .....+..+++.++|+++++..... .|..++..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d-~~~~~I~~~d~~g~--~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTN-HEVGEIVSITPDGN--QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEE-TTTTEEEEECTTCC--EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEe-CCCCeEEEECCCCc--eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 457889999999855554 47889999987543 22222 2235688999999998666544332 466777777765
Q ss_pred eeeccc-CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeE-EEEEe---------cCCCCEEEEEEccCCCEEEEE-
Q 002266 96 QTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSI-ARVLK---------GHKGPVTGLAFDPNSEYLASI- 163 (945)
Q Consensus 96 ~~~l~~-~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~-~~~l~---------~h~~~V~~lafspdg~~Las~- 163 (945)
...... .......++..+++..+++-...+.|+++|...+.. +.... ..-.....| +|++.+|+++
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 432221 122234455555544444444588899999876532 21111 111234566 7888766555
Q ss_pred eCCCcEEEEEccC-Cee--eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE--EeecCCCCC
Q 002266 164 DSIGTVIYWELQS-GRE--LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKL--FSLRGDHVQ 238 (945)
Q Consensus 164 s~Dg~I~iwDl~t-~~~--i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~--~~~~~~h~~ 238 (945)
...+.|.+|++.. +.. ...+.. . .....++++++|+++++....+.|.+||.. ++.. ..+.. ...
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~----~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~-~~~ 255 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVE----Q----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ-GVI 255 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEE----S----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG-TCT
T ss_pred CCCCEEEEEEeCCCCCCCccEEEec----c----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc-ccC
Confidence 4567899999864 321 111110 0 123458999999887776667899999986 5542 23332 235
Q ss_pred CeEEEEEc---CCCCEEEEEECCC
Q 002266 239 PICFLSWS---PNGKYMATSSLDR 259 (945)
Q Consensus 239 ~I~~l~fS---pdg~~Lasgs~Dg 259 (945)
..++++|. |+++.|+.++..+
T Consensus 256 ~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 256 GSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TEEEEEECCSTTTTTEEEEEECTT
T ss_pred CceEEEEecccCCCCEEEEECCCC
Confidence 68899998 8887777665443
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.40 E-value=4.4e-05 Score=91.14 Aligned_cols=260 Identities=12% Similarity=0.033 Sum_probs=157.7
Q ss_pred EEEEEcCCCeEEEEcCCCCcccccccc-ccc--cceEE-EEEecCCCEEEEEE------cCCcEEEEEcCCCeeeeeccc
Q 002266 32 LVTASSSETTISIHDPLLPSNLPKILR-HHR--DGVTA-LALSPNSTCLASGS------IDHSVKLYKFPGGEFQTNITR 101 (945)
Q Consensus 32 L~t~g~~dg~V~IWd~~~~~~~~~~l~-~h~--~~V~~-la~spdg~~Lasgs------~Dg~V~iwdl~~g~~~~~l~~ 101 (945)
|++++ .++.|.-+|..++..+...-. .+. ..+.+ ..+ .++ .+++++ .+|.|+.+|..+|+.+-.+..
T Consensus 124 V~v~t-~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQ-LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEEC-TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEc-CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 66664 788999999888754332211 110 01111 111 144 455554 378999999999987655432
Q ss_pred CCCC-------------------------------------E-EEEEEecCCCEEEEEECC----------------CcE
Q 002266 102 FTLP-------------------------------------I-RVLAFNKSGSMLAAAGDD----------------EGI 127 (945)
Q Consensus 102 ~~~~-------------------------------------V-~~l~fspdg~~Lasgs~D----------------g~I 127 (945)
.... + ..+++.+...+++.++.+ +.|
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence 2110 1 134566777788877665 379
Q ss_pred EEEEcCCCeEEEEEecCC----------CCEEEEEEc-cCC---CEEEEEeCCCcEEEEEccCCeeeeeecccCC-----
Q 002266 128 KLINTIDGSIARVLKGHK----------GPVTGLAFD-PNS---EYLASIDSIGTVIYWELQSGRELHNLKRVAP----- 188 (945)
Q Consensus 128 ~iwd~~~~~~~~~l~~h~----------~~V~~lafs-pdg---~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~----- 188 (945)
..+|..+++....+.... .++. +... .+| ..++.++.+|.++++|..+++.+........
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 999999999887776422 1222 2222 467 4677788999999999999988766542110
Q ss_pred ----CCC-----------------------CCCCCceEEEEcCCCCEEEEEe----------------------------
Q 002266 189 ----DIG-----------------------SDPSSMNVLSWSPDGETLAVPG---------------------------- 213 (945)
Q Consensus 189 ----~~~-----------------------~~~~~i~~l~~spdg~~La~gs---------------------------- 213 (945)
... .....-..++++|+..++++..
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 000 0000112456777666655431
Q ss_pred -----------CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccCCCCe-
Q 002266 214 -----------LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKFDDRI- 281 (945)
Q Consensus 214 -----------~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~~~V- 281 (945)
..|.|..||+.+++.+.+... ..+...-.+...+.+++.++.||.|+.||..+++.+-.......+
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~ 517 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI 517 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecC--CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE
Confidence 346899999999998877642 112211112335667777999999999999999998876544332
Q ss_pred -eEEEEecCCC-EEEEEE
Q 002266 282 -CCMAWKPIGN-ALAVID 297 (945)
Q Consensus 282 -~~la~spdg~-~Las~s 297 (945)
.-+.|..+|+ ++++.+
T Consensus 518 ~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 518 GYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp SCCEEEEETTEEEEEEEE
T ss_pred eccEEEEeCCEEEEEEEc
Confidence 2355667776 344433
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.39 E-value=1.5e-05 Score=84.13 Aligned_cols=178 Identities=13% Similarity=0.072 Sum_probs=126.8
Q ss_pred EEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCC-CEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeec
Q 002266 106 IRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKG-PVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184 (945)
Q Consensus 106 V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~-~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~ 184 (945)
...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ -... .--.+++.. +.+.+..-.++.+.+||..+.+.+.++.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 4678887 4566777778889999999999987776 2222 223466543 2344445568899999999999998886
Q ss_pred ccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC-C---CCCeEEEEEcCCCCEEEEEECCCe
Q 002266 185 RVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD-H---VQPICFLSWSPNGKYMATSSLDRQ 260 (945)
Q Consensus 185 ~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~-h---~~~I~~l~fSpdg~~Lasgs~Dg~ 260 (945)
.. ... ..++ ++++.|+++..++.|.++|..+.+.+..+.-. + -..++.+.|. +|+..+..-.+..
T Consensus 134 ~~-----~eG---wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 134 YS-----GEG---WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp CS-----SCC---CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred CC-----Cce---eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 42 111 2233 56888888877899999999999887776531 1 1245677887 7766665556889
Q ss_pred EEEEECCCCeeeeeccCC--------------CCeeEEEEecCCCEEEEEE
Q 002266 261 ILIWDVGKKLDIDRQKFD--------------DRICCMAWKPIGNALAVID 297 (945)
Q Consensus 261 I~IWD~~~~~~i~~~~~~--------------~~V~~la~spdg~~Las~s 297 (945)
|.+.|..+++++..+... ...++|||+|+++.|++.+
T Consensus 203 I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999999988774431 3568999999877665554
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.38 E-value=2.1e-05 Score=93.86 Aligned_cols=265 Identities=13% Similarity=0.126 Sum_probs=160.2
Q ss_pred CCEEEEEEcCCCeEEEEcCCCCcccccccc-cccc--ceE-EEEEec---CCC-EEEEEE------cCCcEEEEEcCCCe
Q 002266 29 AHHLVTASSSETTISIHDPLLPSNLPKILR-HHRD--GVT-ALALSP---NST-CLASGS------IDHSVKLYKFPGGE 94 (945)
Q Consensus 29 g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~-~h~~--~V~-~la~sp---dg~-~Lasgs------~Dg~V~iwdl~~g~ 94 (945)
+..+++++ .++.|.-+|..++..+...-. .+.. .+. ...+.. +|+ .+++++ .+|.|..+|..+|+
T Consensus 117 ~~~v~~~t-~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 117 GDKVFFGT-LDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TTEEEEEE-TTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCEEEEEe-CCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 44566665 788999999888754332211 1100 111 111111 233 555654 27899999999988
Q ss_pred eeeecccCCCC-----------------------------------------EEEEEEecCCCEEEEEEC----------
Q 002266 95 FQTNITRFTLP-----------------------------------------IRVLAFNKSGSMLAAAGD---------- 123 (945)
Q Consensus 95 ~~~~l~~~~~~-----------------------------------------V~~l~fspdg~~Lasgs~---------- 123 (945)
.+-........ -..+++.|...+++++..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 76543221100 013466677777777763
Q ss_pred ----------C----CcEEEEEcCCCeEEEEEec--CC--------CCEEEEEEc-cCCC---EEEEEeCCCcEEEEEcc
Q 002266 124 ----------D----EGIKLINTIDGSIARVLKG--HK--------GPVTGLAFD-PNSE---YLASIDSIGTVIYWELQ 175 (945)
Q Consensus 124 ----------D----g~I~iwd~~~~~~~~~l~~--h~--------~~V~~lafs-pdg~---~Las~s~Dg~I~iwDl~ 175 (945)
| +.|..+|..+|+.+..+.. |. .++. +... .+|+ .++.++.+|.++++|..
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 354 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRS 354 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECC
Confidence 2 5799999999998887753 32 1222 2222 4674 78889999999999999
Q ss_pred CCeeeeeecccCC------------------CCCC---------C-----------CCCceEEEEcCCCCEEEEEe----
Q 002266 176 SGRELHNLKRVAP------------------DIGS---------D-----------PSSMNVLSWSPDGETLAVPG---- 213 (945)
Q Consensus 176 t~~~i~~~~~~~~------------------~~~~---------~-----------~~~i~~l~~spdg~~La~gs---- 213 (945)
+++.+..+..... .... . ...-..++++|+...+++..
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 9988766543210 0000 0 00012356777655555432
Q ss_pred -----------------------------CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 002266 214 -----------------------------LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264 (945)
Q Consensus 214 -----------------------------~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IW 264 (945)
..|.|..||+.+++.+.+.... .++..-.....+.+++.++.||.|+.|
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~ 512 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAF 512 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEE
Confidence 2578999999999988776531 222221222246678889999999999
Q ss_pred ECCCCeeeeeccCCCCeeE--EEEecCCC-EEEEEE
Q 002266 265 DVGKKLDIDRQKFDDRICC--MAWKPIGN-ALAVID 297 (945)
Q Consensus 265 D~~~~~~i~~~~~~~~V~~--la~spdg~-~Las~s 297 (945)
|.++++.+........+.+ +.|..+|+ ++++.+
T Consensus 513 D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 513 DAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEc
Confidence 9999999988766555443 66777887 444433
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.36 E-value=1.6e-05 Score=96.36 Aligned_cols=277 Identities=10% Similarity=0.042 Sum_probs=154.6
Q ss_pred EEEECC-CCCEEEEEEcCC----------CeEEEEcCCCCcccc-ccc-cccccceEEEEEecCCCEEEEEEc-CCcEEE
Q 002266 22 SILWDQ-QAHHLVTASSSE----------TTISIHDPLLPSNLP-KIL-RHHRDGVTALALSPNSTCLASGSI-DHSVKL 87 (945)
Q Consensus 22 svafsp-dg~~L~t~g~~d----------g~V~IWd~~~~~~~~-~~l-~~h~~~V~~la~spdg~~Lasgs~-Dg~V~i 87 (945)
++++.+ +|+.++.+|... ..+.+||..+..-.. ..+ ..+.....++++..+++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455667 788777776321 168899987764211 111 112233445777889999999884 468999
Q ss_pred EEcCCCeeeeecccC-CCCEEEEEEecCCCEEEEEE-CC-----CcEEEEEcCCCeEEEEE----ecCCCCEEEEEEccC
Q 002266 88 YKFPGGEFQTNITRF-TLPIRVLAFNKSGSMLAAAG-DD-----EGIKLINTIDGSIARVL----KGHKGPVTGLAFDPN 156 (945)
Q Consensus 88 wdl~~g~~~~~l~~~-~~~V~~l~fspdg~~Lasgs-~D-----g~I~iwd~~~~~~~~~l----~~h~~~V~~lafspd 156 (945)
||..+.+-...-... ...-.+++..+++++++.|+ .+ ..+.+||..+.+....- ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 998776533221111 11123455667999999998 34 46899999877643320 000000000112234
Q ss_pred CCEEEEEeCCC---------cEEEEEccCCeeeeeecccCCC--CCCCCCCceEEEEcC-CCCEEEEEeCCC--------
Q 002266 157 SEYLASIDSIG---------TVIYWELQSGRELHNLKRVAPD--IGSDPSSMNVLSWSP-DGETLAVPGLKN-------- 216 (945)
Q Consensus 157 g~~Las~s~Dg---------~I~iwDl~t~~~i~~~~~~~~~--~~~~~~~i~~l~~sp-dg~~La~gs~dg-------- 216 (945)
+..++.++.+| .+..||..+............. .......-.++.|.. +++.+++|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 55555555443 4678888776533222111000 000011123445544 788888887532
Q ss_pred ---eEEEEECCCCcEEEee--cCCCCCCeEEEEEcCCCCEEEEEECC-----------CeEEEEECCCCeeeeec--cCC
Q 002266 217 ---DVVMYDRDTAEKLFSL--RGDHVQPICFLSWSPNGKYMATSSLD-----------RQILIWDVGKKLDIDRQ--KFD 278 (945)
Q Consensus 217 ---~I~vwD~~t~~~~~~~--~~~h~~~I~~l~fSpdg~~Lasgs~D-----------g~I~IWD~~~~~~i~~~--~~~ 278 (945)
.|.+||..+..-.... .......-.+++..|+|++++.|+.+ ..+.+||..+.+..... ...
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 6888888765543322 11111222345677899999999854 46899999876544332 111
Q ss_pred C-CeeEEEEecCCCEEEEEEc
Q 002266 279 D-RICCMAWKPIGNALAVIDV 298 (945)
Q Consensus 279 ~-~V~~la~spdg~~Las~s~ 298 (945)
. ......+.|+++.+++|+.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 1 2234456789998888874
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.36 E-value=5.5e-05 Score=79.07 Aligned_cols=185 Identities=11% Similarity=0.028 Sum_probs=126.3
Q ss_pred ceEEEEEecCCCEEEEEEcC--CcEEEEEcCCCeeeeecccCCCCE-EEEEEecCCCEEEE-EECCCcEEEEEcCCCeEE
Q 002266 63 GVTALALSPNSTCLASGSID--HSVKLYKFPGGEFQTNITRFTLPI-RVLAFNKSGSMLAA-AGDDEGIKLINTIDGSIA 138 (945)
Q Consensus 63 ~V~~la~spdg~~Lasgs~D--g~V~iwdl~~g~~~~~l~~~~~~V-~~l~fspdg~~Las-gs~Dg~I~iwd~~~~~~~ 138 (945)
-...+.|+. +.++.+.+.. +.|+++|+.+++....+.-..... ..+++. +..|.. .-.++.+.+||..+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 466899986 5555665654 489999999999887765332221 233443 444444 446788999999999999
Q ss_pred EEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeE
Q 002266 139 RVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDV 218 (945)
Q Consensus 139 ~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I 218 (945)
.++...... ..++ +++..|+++..++.|.++|..+.+.+..+...... ..-..++.+.|. +|+.++....+..|
T Consensus 99 ~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g--~~~~~lNeLe~~-~G~lyanvw~s~~I 172 (243)
T 3mbr_X 99 ARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG--RPLDNLNELEWV-NGELLANVWLTSRI 172 (243)
T ss_dssp EEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETT--EECCCEEEEEEE-TTEEEEEETTTTEE
T ss_pred EEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC--cccccceeeEEe-CCEEEEEECCCCeE
Confidence 888754332 3444 56777777777889999999999888777542210 111335667766 67666555568899
Q ss_pred EEEECCCCcEEEeecCC------------CCCCeEEEEEcCCCCEEEEEE
Q 002266 219 VMYDRDTAEKLFSLRGD------------HVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 219 ~vwD~~t~~~~~~~~~~------------h~~~I~~l~fSpdg~~Lasgs 256 (945)
.+.|..+++.+..+.-. ...-.+.++|+|+++.|...+
T Consensus 173 ~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 173 ARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 99999999988776521 123568899999776665555
No 264
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.35 E-value=5.1e-05 Score=79.37 Aligned_cols=180 Identities=15% Similarity=0.149 Sum_probs=126.4
Q ss_pred CEEEEEEecCCCEEEEEECCC--cEEEEEcCCCeEEEEEecCCCC-EEEEEEccCCCEE-EEEeCCCcEEEEEccCCeee
Q 002266 105 PIRVLAFNKSGSMLAAAGDDE--GIKLINTIDGSIARVLKGHKGP-VTGLAFDPNSEYL-ASIDSIGTVIYWELQSGREL 180 (945)
Q Consensus 105 ~V~~l~fspdg~~Lasgs~Dg--~I~iwd~~~~~~~~~l~~h~~~-V~~lafspdg~~L-as~s~Dg~I~iwDl~t~~~i 180 (945)
-...+.|+. +.++.+.+..| .|+++|+.+++.+..+...... --.+++. +..| ...-.++.+.+||..+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 456788886 55555556544 8999999999998887643322 2344544 4444 44456889999999999999
Q ss_pred eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC-C---CCCeEEEEEcCCCCEEEEEE
Q 002266 181 HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD-H---VQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 181 ~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~-h---~~~I~~l~fSpdg~~Lasgs 256 (945)
.++.... .. ..++ +++..|+++..++.|.++|..+.+.+..+.-. + -..++.+.|. +|+..+..-
T Consensus 99 ~ti~~~~-------~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw 167 (243)
T 3mbr_X 99 ARFRYPG-------EG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW 167 (243)
T ss_dssp EEEECSS-------CC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred EEEeCCC-------Cc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC
Confidence 8886421 11 2344 56777777777899999999999887776531 1 1345667776 777666665
Q ss_pred CCCeEEEEECCCCeeeeeccC--------------CCCeeEEEEecCCCEEEEEEc
Q 002266 257 LDRQILIWDVGKKLDIDRQKF--------------DDRICCMAWKPIGNALAVIDV 298 (945)
Q Consensus 257 ~Dg~I~IWD~~~~~~i~~~~~--------------~~~V~~la~spdg~~Las~s~ 298 (945)
.+..|.+.|..+++++..+.. ....++++|+|+++.|++.+.
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 688999999999999877432 134689999998887776654
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.00046 Score=85.31 Aligned_cols=279 Identities=10% Similarity=0.014 Sum_probs=174.7
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccc-------------ccccccceEEEEEecCCCEEEEEEcCC
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKI-------------LRHHRDGVTALALSPNSTCLASGSIDH 83 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~-------------l~~h~~~V~~la~spdg~~Lasgs~Dg 83 (945)
...|.++...++|...+.+ ..+-|.+++..+....... .......|.++...++|. |..|+.++
T Consensus 257 ~~~i~~i~~d~~g~lWigt--~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~ 333 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIAT--ELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGG 333 (781)
T ss_dssp CCCEEEEEECTTSEEEEEE--SSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSS
T ss_pred CceEEEEEECCCCCEEEEe--CCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCC
Confidence 3679999999888755533 4356788886554211100 012346799999998886 45566666
Q ss_pred cEEEEEcCCCeeeeecc---------cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE---ecCCCCEEEE
Q 002266 84 SVKLYKFPGGEFQTNIT---------RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL---KGHKGPVTGL 151 (945)
Q Consensus 84 ~V~iwdl~~g~~~~~l~---------~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l---~~h~~~V~~l 151 (945)
-|..|+...+....... -....|.++...++|. |.+|+.++.|.+|+..++...... ......|.++
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 78888876554322111 1234688998887776 556776777999998654332111 1234679999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEe
Q 002266 152 AFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFS 231 (945)
Q Consensus 152 afspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~ 231 (945)
..+++|.+.+ |+.++.|..+|..+++... +... ......|.++...++|. |.+|+. +.|.+||..+++....
T Consensus 413 ~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~~~~----~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 413 LKDSEGNLWF-GTYLGNISYYNTRLKKFQI-IELE----KNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHH 484 (781)
T ss_dssp EECTTSCEEE-EETTEEEEEECSSSCEEEE-CCST----TTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEE
T ss_pred EECCCCCEEE-EeccCCEEEEcCCCCcEEE-eccC----CCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEec
Confidence 9988887544 6666778999987765432 2110 12235678888887776 555555 6799999887654322
Q ss_pred ecC----CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeecc----CCCCeeEEEEecCCCEEEEEEcCCeEE
Q 002266 232 LRG----DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQK----FDDRICCMAWKPIGNALAVIDVMGKYG 303 (945)
Q Consensus 232 ~~~----~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~----~~~~V~~la~spdg~~Las~s~DG~I~ 303 (945)
... .....|.++...++|++.+.. .++-|..||..++....... ....|.++...++|...+ ++..|.|.
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~Glv~ 562 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGT-FGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWL-ATGEGLVC 562 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEE-SSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEE-EETTEEEE
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEE-cCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEE-EECCCceE
Confidence 211 013578999999998865544 43448889987765544321 135688998888887544 44566557
Q ss_pred EEecCC
Q 002266 304 VWESVV 309 (945)
Q Consensus 304 iWd~~~ 309 (945)
.|+...
T Consensus 563 ~~d~~~ 568 (781)
T 3v9f_A 563 FPSARN 568 (781)
T ss_dssp ESCTTT
T ss_pred EECCCC
Confidence 787653
No 266
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=0.00079 Score=83.14 Aligned_cols=276 Identities=10% Similarity=0.023 Sum_probs=171.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccc------cccccceEEEEEecCCCEEEEEEcCCcEEEEEcC
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKIL------RHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP 91 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l------~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~ 91 (945)
..|.++...++|...+.+ .+ -+.+||..+........ ......|.++...++|. |..|+..+-|.+++..
T Consensus 211 ~~i~~i~~d~~g~lwigt--~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT--SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECTTCCEEEEE--TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CceeEEEEcCCCCEEEEe--CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 569999999988866654 34 68889876542111110 01245699999888875 4455664558889987
Q ss_pred CCeeeeecc--------------cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEe---------cCCCCE
Q 002266 92 GGEFQTNIT--------------RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLK---------GHKGPV 148 (945)
Q Consensus 92 ~g~~~~~l~--------------~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~---------~h~~~V 148 (945)
++....... -....|.++...++|. |-+|+.++.|..++........... .....|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 665322111 1235689999888875 6677777789999887654332211 023569
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Q 002266 149 TGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 149 ~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
.++..+++|.+ ..|+.++.|.+||..++.... +.. ........|.++...++|. |.+|+.++.|..|+..+++.
T Consensus 366 ~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~-~~~---~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 366 SSVCDDGQGKL-WIGTDGGGINVFENGKRVAIY-NKE---NRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp EEEEECTTSCE-EEEEBSSCEEEEETTEEEEEC-C--------CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEE
T ss_pred EEEEEcCCCCE-EEEeCCCcEEEEECCCCeEEE-ccC---CCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcE
Confidence 99999888774 455656678899976543221 111 0112235678888887776 45567777899999887654
Q ss_pred EEeec-CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccC------CCCeeEEEEecCCCEEEEEEcCCe
Q 002266 229 LFSLR-GDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF------DDRICCMAWKPIGNALAVIDVMGK 301 (945)
Q Consensus 229 ~~~~~-~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~------~~~V~~la~spdg~~Las~s~DG~ 301 (945)
..... ......|.++...++|.+.+. +. +.|.+||..++........ ...|.++...++|+..+ ++..+-
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~G 516 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGG 516 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSC
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCC
Confidence 32221 113467899998888875554 44 5699999887655433211 35688998888887554 444333
Q ss_pred EEEEec
Q 002266 302 YGVWES 307 (945)
Q Consensus 302 I~iWd~ 307 (945)
|..|+.
T Consensus 517 l~~~~~ 522 (781)
T 3v9f_A 517 VGIYTP 522 (781)
T ss_dssp EEEECT
T ss_pred EEEEeC
Confidence 666764
No 267
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.29 E-value=0.0021 Score=70.55 Aligned_cols=271 Identities=11% Similarity=0.090 Sum_probs=153.0
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccc----ccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR----HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG 92 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~----~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~ 92 (945)
...+.+|.|.+.+..++ ++ ..+.|.... .+......+. .....+.+|.|.+ +..++ ++..+.|.. ....
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G-~~g~i~~s~--DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VG-VNATLMETR--DGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EE-TTTEEEEES--STTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESST
T ss_pred CCcEEEEEECCCCcEEE-Ec-CCCeEEEeC--CCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCC
Confidence 45799999988887777 44 577654332 2211111111 1244688999986 44444 456665443 3334
Q ss_pred Ceeeeecc---cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeE-EEEEecCCCCEEEEEEccCCCEEEEEeCCCc
Q 002266 93 GEFQTNIT---RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSI-ARVLKGHKGPVTGLAFDPNSEYLASIDSIGT 168 (945)
Q Consensus 93 g~~~~~l~---~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~-~~~l~~h~~~V~~lafspdg~~Las~s~Dg~ 168 (945)
|+....+. .+...+..+.+.+++..++++ .++.|.. ....+.. ......+...+..+++.+++.+++++. +|.
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~ 184 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGS 184 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSS
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCc
Confidence 44333322 233467888887777665554 5665432 2222332 222334556789999999988777664 454
Q ss_pred EEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC---CCCCeEEEEE
Q 002266 169 VIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD---HVQPICFLSW 245 (945)
Q Consensus 169 I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~---h~~~I~~l~f 245 (945)
+..-+-..+..-..+.. .....+..+.+.+++..+++ +.+|.+++.+...++.-..+... ....+..+.+
T Consensus 185 ~~~S~d~gG~tW~~~~~------~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHNR------TTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp EEEEECTTCSSCEEEEC------CSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred EEEEeCCCCCceeECCC------CCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 44322111222122211 12345678889998876655 45788877653323322222211 2245889999
Q ss_pred cCCCCEEEEEECCCeEEEEECCCCeeeeec----cCCCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 246 SPNGKYMATSSLDRQILIWDVGKKLDIDRQ----KFDDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 246 Spdg~~Lasgs~Dg~I~IWD~~~~~~i~~~----~~~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
.+++.+++++. +|.| ++..+.++.-... .....+.++.|.+++ .+++++.+|.|..++.
T Consensus 258 ~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 258 RTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp SSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred cCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 98887777665 6766 4455544332222 234568889997554 5777788998877754
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.27 E-value=0.00037 Score=73.66 Aligned_cols=206 Identities=14% Similarity=0.191 Sum_probs=134.8
Q ss_pred ecccCCCCEEEEEEecCCCEE-EEEECCCcEEEEEcCCCeEEEEEec-CCCCEEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 002266 98 NITRFTLPIRVLAFNKSGSML-AAAGDDEGIKLINTIDGSIARVLKG-HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQ 175 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~L-asgs~Dg~I~iwd~~~~~~~~~l~~-h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~ 175 (945)
.+.+....+..++|+|++..| ++...++.|..+|.. ++....+.- .....-.|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 344555679999999976655 456778889999997 877777642 23568899999998877776677899999987
Q ss_pred CCeeeeeecccC-C-CCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECC---CCcEEEee------cCCCCCCeEEEE
Q 002266 176 SGRELHNLKRVA-P-DIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRD---TAEKLFSL------RGDHVQPICFLS 244 (945)
Q Consensus 176 t~~~i~~~~~~~-~-~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~---t~~~~~~~------~~~h~~~I~~l~ 244 (945)
....+....... + ...........++|+|.++.|+++.......+|... ....+..+ ...+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 654322111111 1 111234557889999998777777665544444443 11111111 111334678999
Q ss_pred EcC-CCCEEEEEECCCeEEEEECCCCeeeeeccCC----------CCeeEEEEecCCCEEEEEEcCCeEEEEe
Q 002266 245 WSP-NGKYMATSSLDRQILIWDVGKKLDIDRQKFD----------DRICCMAWKPIGNALAVIDVMGKYGVWE 306 (945)
Q Consensus 245 fSp-dg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~~----------~~V~~la~spdg~~Las~s~DG~I~iWd 306 (945)
++| .|.+++.+...+.|.++|.... ++...... ...-+|+|.++|+ |+..+....++++.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT 250 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence 999 4666777777889999997754 54443222 2568999999997 55556667666664
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=0.00013 Score=83.62 Aligned_cols=235 Identities=11% Similarity=0.069 Sum_probs=141.3
Q ss_pred ceEEEEEec-CCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECC-C----cEEEEEcCCCe
Q 002266 63 GVTALALSP-NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDD-E----GIKLINTIDGS 136 (945)
Q Consensus 63 ~V~~la~sp-dg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~D-g----~I~iwd~~~~~ 136 (945)
....|+++| ++..|+++...+.|+.+++.++...... ........++|+++|++|+++... + .+.+++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 457899998 4556666665588999998876654433 345568899999999977776542 1 2444443 322
Q ss_pred EE--EEEecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE-
Q 002266 137 IA--RVLKGHKGPVTGLAFDP-NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP- 212 (945)
Q Consensus 137 ~~--~~l~~h~~~V~~lafsp-dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g- 212 (945)
.. ..+.. ......++++| ++.++++-..++.|..|+...+........ ......+.++|+|+|++|+++
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~------~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI------QDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC------SSSSCCEEEEECTTSSEEEEEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc------CCCCcceeEEEcCCCCEEEEEE
Confidence 11 22322 23457788999 677666666778999999877654222111 011335789999999965554
Q ss_pred eCCCeEEEEECCC--CcE--EEeecCC--C------------CCCeE-EEEEc--------CCCCEEEEEECCCeEEEEE
Q 002266 213 GLKNDVVMYDRDT--AEK--LFSLRGD--H------------VQPIC-FLSWS--------PNGKYMATSSLDRQILIWD 265 (945)
Q Consensus 213 s~dg~I~vwD~~t--~~~--~~~~~~~--h------------~~~I~-~l~fS--------pdg~~Lasgs~Dg~I~IWD 265 (945)
...+.|..++... +.. +..+.+. . -.... .++.. ++|.++++-...+.|+.++
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 4577899987653 211 1111110 0 11122 45553 3466666666678888888
Q ss_pred CCCCeeeeeccC------------------CCCeeEEEEecCCCEEEEE-EcCCeEEEEec
Q 002266 266 VGKKLDIDRQKF------------------DDRICCMAWKPIGNALAVI-DVMGKYGVWES 307 (945)
Q Consensus 266 ~~~~~~i~~~~~------------------~~~V~~la~spdg~~Las~-s~DG~I~iWd~ 307 (945)
. .+........ -.....+++.|++..|+++ ..+..|+.+++
T Consensus 369 ~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 369 P-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp T-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred C-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 4 4544333221 1247899999954445554 45567877764
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.26 E-value=0.00018 Score=76.05 Aligned_cols=204 Identities=11% Similarity=0.137 Sum_probs=131.0
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccc-ccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCee
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR-HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEF 95 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~-~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~ 95 (945)
...+..++|+|++..|+++...++.|...|.. + .....+. ......-.|++.+++.++++.-.++.+.++++.....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g-~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G-DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C-CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C-CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence 36799999999988888776688889888876 3 3333332 2225677889999887766655678899998765432
Q ss_pred ---eeecc------cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC---CCeEEEEEe-------cCCCCEEEEEEccC
Q 002266 96 ---QTNIT------RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI---DGSIARVLK-------GHKGPVTGLAFDPN 156 (945)
Q Consensus 96 ---~~~l~------~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~---~~~~~~~l~-------~h~~~V~~lafspd 156 (945)
..... ........++|+|.+..|.++.......+|.+. ....+..+. .+...+.+++++|.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 11111 124456899999999888888776665666553 111122221 12345789999995
Q ss_pred C-CEEEEEeCCCcEEEEEccCCeeeeeecccCCC--CCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECC
Q 002266 157 S-EYLASIDSIGTVIYWELQSGRELHNLKRVAPD--IGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRD 224 (945)
Q Consensus 157 g-~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~--~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~ 224 (945)
. .+++.+.....|.++|.. ++.+..+...... ..........|+|.++|+..++ +..+.+++|...
T Consensus 184 tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp TTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred CCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 4 456666677889999965 4454444332111 1111234567999999985444 677788887654
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.24 E-value=6.3e-05 Score=92.70 Aligned_cols=194 Identities=6% Similarity=-0.026 Sum_probs=113.3
Q ss_pred ceEEEEEe-cCCCEEEEEEc-CC----cEEEEEcCCC-eeeeecccCCCCEEEEEEecCCCEEEEEECC-----CcEEEE
Q 002266 63 GVTALALS-PNSTCLASGSI-DH----SVKLYKFPGG-EFQTNITRFTLPIRVLAFNKSGSMLAAAGDD-----EGIKLI 130 (945)
Q Consensus 63 ~V~~la~s-pdg~~Lasgs~-Dg----~V~iwdl~~g-~~~~~l~~~~~~V~~l~fspdg~~Lasgs~D-----g~I~iw 130 (945)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+.. ........++|+|||+.|+....+ ..|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67889999 99998886543 33 4999999988 63211 011113467899999988887765 258888
Q ss_pred EcCCCeE--EEEEe-cCCCCEEEEEEccCCCEEEEEeC---CCcEEEEEccCCe-ee--eeecccCCCCCCCCCCceEEE
Q 002266 131 NTIDGSI--ARVLK-GHKGPVTGLAFDPNSEYLASIDS---IGTVIYWELQSGR-EL--HNLKRVAPDIGSDPSSMNVLS 201 (945)
Q Consensus 131 d~~~~~~--~~~l~-~h~~~V~~lafspdg~~Las~s~---Dg~I~iwDl~t~~-~i--~~~~~~~~~~~~~~~~i~~l~ 201 (945)
++.++.. ...+. .......++.|+|||++|+..+. ...|+++|+.++. .. ..+.. ........+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~------~~~~~~~s~~ 326 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP------REKGVRYDVQ 326 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC------CCTTCCEEEE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec------CCCCceEEEe
Confidence 8877642 22332 23345678999999998887653 3368888887652 11 22211 1123344455
Q ss_pred EcCCCCEEEEEeC-C----CeEEEEECCCC-cEEE-eecCCCCCCeEEEEEcCCCCEEEEEECCCe--EEEEEC
Q 002266 202 WSPDGETLAVPGL-K----NDVVMYDRDTA-EKLF-SLRGDHVQPICFLSWSPNGKYMATSSLDRQ--ILIWDV 266 (945)
Q Consensus 202 ~spdg~~La~gs~-d----g~I~vwD~~t~-~~~~-~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~--I~IWD~ 266 (945)
|+. |..|+..+. + ..|.++++.+. .... .+.......+..+.+. .+.++++...++. |.++++
T Consensus 327 ~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 327 MHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 544 555554433 2 36888887652 2111 1222111234455554 2344555666775 555665
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.17 E-value=0.0031 Score=68.84 Aligned_cols=232 Identities=11% Similarity=0.016 Sum_probs=139.4
Q ss_pred EEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCC----CeeeeecccCCCC
Q 002266 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPG----GEFQTNITRFTLP 105 (945)
Q Consensus 31 ~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~----g~~~~~l~~~~~~ 105 (945)
+|+.+. ...|+..|+.... ....+ .....+.+++|++.+..|+.+. ..+.|..+++.. ......+...-..
T Consensus 3 ~ll~~~--~~~I~~i~~~~~~-~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 3 YLFFTN--RHEVRKMTLDRSE-YTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp EEEEEC--BSSEEEEETTSCC-CEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred EEEEEC--CCeEEEEECCCcc-eEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 455553 4568888876643 22222 2345678999998765555544 568899999865 2222222222234
Q ss_pred EEEEEEecCCCEEEEE-ECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCC--CcEEEEEccCCeeeee
Q 002266 106 IRVLAFNKSGSMLAAA-GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSI--GTVIYWELQSGRELHN 182 (945)
Q Consensus 106 V~~l~fspdg~~Lasg-s~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~D--g~I~iwDl~t~~~i~~ 182 (945)
...+++.+.+..|+.+ ...+.|.++++........+.........++++|.+..|+.+... +.|..+++... ....
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~ 157 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYS 157 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEE
Confidence 5788998755555544 567789999986544333333344678999999977666655543 67888887533 2222
Q ss_pred ecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecC-CCCCCeEEEEEcCCCCEEEEEECCCe
Q 002266 183 LKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRG-DHVQPICFLSWSPNGKYMATSSLDRQ 260 (945)
Q Consensus 183 ~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~-~h~~~I~~l~fSpdg~~Lasgs~Dg~ 260 (945)
+.. ......+.++|+|++..|+++. ..+.|..+|............ ........+++. .+.++++-...+.
T Consensus 158 ~~~------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 158 LVT------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 230 (316)
T ss_dssp EEC------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE
T ss_pred EEE------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe
Confidence 211 1123467899999777666654 467899999974332221111 122345677775 4555556666788
Q ss_pred EEEEECCCCeeeee
Q 002266 261 ILIWDVGKKLDIDR 274 (945)
Q Consensus 261 I~IWD~~~~~~i~~ 274 (945)
|..++..+++.+..
T Consensus 231 V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 231 IFSANRLTGSDVNL 244 (316)
T ss_dssp EEEEETTTCCCCEE
T ss_pred EEEEeCCCCcceEE
Confidence 99998766654433
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.17 E-value=0.0015 Score=72.53 Aligned_cols=241 Identities=10% Similarity=-0.045 Sum_probs=144.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCCCeeeee
Q 002266 20 FCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPGGEFQTN 98 (945)
Q Consensus 20 V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~g~~~~~ 98 (945)
.+|.+..+ ..+|+.+ ....|+..++... ... .+......+..++|++.+..|+.+. ..+.|..+++..+.....
T Consensus 36 ~~C~~~~~-~~~ll~~--~~~~I~~i~~~g~-~~~-~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 110 (349)
T 3v64_C 36 RSCKALGP-EPVLLFA--NRIDIRQVLPHRS-EYT-LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 110 (349)
T ss_dssp SCEEESSS-CCEEEEE--CBSCEEEECTTSC-CEE-EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred Cccccccc-CceeEee--cccceEEEeCCCC-eeE-EeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE
Confidence 34545555 3455554 3456777776543 222 2222344578999998665555544 568899999876553333
Q ss_pred cccCCCCEEEEEEecCCCEEEEE-ECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC-C-CcEEEEEcc
Q 002266 99 ITRFTLPIRVLAFNKSGSMLAAA-GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS-I-GTVIYWELQ 175 (945)
Q Consensus 99 l~~~~~~V~~l~fspdg~~Lasg-s~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~-D-g~I~iwDl~ 175 (945)
+.........+++.+.+..|+.+ ...+.|.++++........+...-.....++++|.+..|+.+.. . +.|..+++.
T Consensus 111 ~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 111 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 33233445788998765555444 45678999998654433333334466799999996666655543 3 678888875
Q ss_pred CCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEE
Q 002266 176 SGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMAT 254 (945)
Q Consensus 176 t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Las 254 (945)
... ...+.. ......+.++|+|++..|+++. ..+.|..+|+........+.. .......+++ ..+.++++
T Consensus 191 G~~-~~~~~~------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~-~~~~P~giav-~~~~ly~t 261 (349)
T 3v64_C 191 GSG-RRIIAD------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITV-FEDSLYWT 261 (349)
T ss_dssp SCS-CEESCC------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEE-ETTEEEEE
T ss_pred CCC-cEEEEE------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC-CCCCceEEEE-ECCEEEEe
Confidence 432 222211 1123457899999776666554 467899999875433322322 3345667777 34555555
Q ss_pred EECCCeEEEEECCCCeeeee
Q 002266 255 SSLDRQILIWDVGKKLDIDR 274 (945)
Q Consensus 255 gs~Dg~I~IWD~~~~~~i~~ 274 (945)
-...+.|..++..++..+..
T Consensus 262 d~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 262 DWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp ETTTTEEEEEETTTCCSCEE
T ss_pred cCCCCeEEEEEccCCCccEE
Confidence 55677888888655544433
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.14 E-value=0.0004 Score=79.59 Aligned_cols=236 Identities=11% Similarity=0.031 Sum_probs=142.3
Q ss_pred ceEEEEEecC--CCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCC-----cEEEEEcCCC
Q 002266 63 GVTALALSPN--STCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDE-----GIKLINTIDG 135 (945)
Q Consensus 63 ~V~~la~spd--g~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg-----~I~iwd~~~~ 135 (945)
....|+|+|+ +..|+.+...+.|+.++..++....... .......++|+++|+ |+++...+ .+..++...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4578999984 4455555544889999988887654433 445689999999999 55554322 2333333222
Q ss_pred eE-EEEEecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe
Q 002266 136 SI-ARVLKGHKGPVTGLAFDP-NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG 213 (945)
Q Consensus 136 ~~-~~~l~~h~~~V~~lafsp-dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs 213 (945)
.. ...+. .......++++| ++.++++-..++.|+.+|..++.....+.... . ......++|+|+|++|+++.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~----~-~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD----T-KGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS----C-CSSCEEEEECTTSSEEEEEE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC----C-CCCcccEEEeCCCCEEEEEe
Confidence 11 11222 234457789999 67666666667889999988775523222111 0 12234699999999665554
Q ss_pred -CCCeEEEEECCC--CcE--EEeecCC--------------CCCCeEEEEE---------cCCCCEEEEEECCCeEEEEE
Q 002266 214 -LKNDVVMYDRDT--AEK--LFSLRGD--------------HVQPICFLSW---------SPNGKYMATSSLDRQILIWD 265 (945)
Q Consensus 214 -~dg~I~vwD~~t--~~~--~~~~~~~--------------h~~~I~~l~f---------Spdg~~Lasgs~Dg~I~IWD 265 (945)
..+.|+.++... +.. ...+.+. .-.....+++ .++|.++++-...+.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 467899988652 211 1111110 1123567899 77887777777788999998
Q ss_pred CCCCeeeeeccC------------------CCCeeEEEEe-cCCCEEEEEEcCCeEEEEec
Q 002266 266 VGKKLDIDRQKF------------------DDRICCMAWK-PIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 266 ~~~~~~i~~~~~------------------~~~V~~la~s-pdg~~Las~s~DG~I~iWd~ 307 (945)
. ++........ -....+|++. ++|.++++=..++.|+.+++
T Consensus 372 ~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 372 P-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp T-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred C-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 5 4444332211 1236789999 45544444445667877764
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.14 E-value=0.00089 Score=75.47 Aligned_cols=239 Identities=10% Similarity=-0.049 Sum_probs=144.5
Q ss_pred EEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEE-EcCCcEEEEEcCCCeeeeecc
Q 002266 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG-SIDHSVKLYKFPGGEFQTNIT 100 (945)
Q Consensus 22 svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasg-s~Dg~V~iwdl~~g~~~~~l~ 100 (945)
|.+..+ ..+|+.+ ....|+..++... .. ..+......+..++|++.+..|+.+ ...+.|..+++..+.....+.
T Consensus 81 C~~~~~-~~~l~~~--~~~~I~~i~~~~~-~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 81 CKALGP-EPVLLFA--NRIDIRQVLPHRS-EY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp EEECSS-CCEEEEE--CBSCEEEECTTSC-CC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred ECCccc-cceeEee--cCccceeeccCCC-cE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 334444 3455554 3457888887554 22 2222234568899999865555544 456889999987665433333
Q ss_pred cCCCCEEEEEEecCCCEEEEE-ECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC-C-CcEEEEEccCC
Q 002266 101 RFTLPIRVLAFNKSGSMLAAA-GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS-I-GTVIYWELQSG 177 (945)
Q Consensus 101 ~~~~~V~~l~fspdg~~Lasg-s~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~-D-g~I~iwDl~t~ 177 (945)
........+++.+.+..|+.+ ...+.|.++++........+.........|+++|.+..|+.+.. . +.|..+++...
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 233345678888765555554 44667888887654433334434467899999997776665544 3 67888887543
Q ss_pred eeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEE
Q 002266 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 178 ~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs 256 (945)
....... ......+.++|+|++..|+++ +..+.|..+|+........+.. .......+++ ..+.++++-.
T Consensus 236 ~~~~~~~-------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 236 GRRIIAD-------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp SCEEEEC-------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS-SCSSEEEEEE-ETTEEEEEET
T ss_pred CcEEEEE-------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC-CCCCceEEEE-ECCEEEEeeC
Confidence 2222111 112345789999876666555 4467899999875433333322 3345677777 4455556666
Q ss_pred CCCeEEEEECCCCeeeee
Q 002266 257 LDRQILIWDVGKKLDIDR 274 (945)
Q Consensus 257 ~Dg~I~IWD~~~~~~i~~ 274 (945)
..+.|..++..++..+..
T Consensus 307 ~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 307 HTKSINSANKFTGKNQEI 324 (386)
T ss_dssp TTTEEEEEETTTCCSCEE
T ss_pred CCCeEEEEECCCCcceEE
Confidence 678888888666554444
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00051 Score=78.65 Aligned_cols=244 Identities=7% Similarity=-0.023 Sum_probs=141.7
Q ss_pred CCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcC-C----cEEEEEcC
Q 002266 18 ASFCSILWDQ-QAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSID-H----SVKLYKFP 91 (945)
Q Consensus 18 ~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~D-g----~V~iwdl~ 91 (945)
.....|+|+| ++..|+++. ..+.|+.+|..... ...+.........|+|+++|++|+++... + .+.+++ .
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d-~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~ 212 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVG-EQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-R 212 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEE-BTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-G
T ss_pred CCCCEEEECCCCCCeEEEEe-CCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-C
Confidence 3457889998 466677765 33789999876542 22222345568899999999966666542 2 233344 3
Q ss_pred CCeee--eecccCCCCEEEEEEec-CCCEEEEEECCCcEEEEEcCCCeEEEEEec-CCCCEEEEEEccCCCEEEEE-eCC
Q 002266 92 GGEFQ--TNITRFTLPIRVLAFNK-SGSMLAAAGDDEGIKLINTIDGSIARVLKG-HKGPVTGLAFDPNSEYLASI-DSI 166 (945)
Q Consensus 92 ~g~~~--~~l~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~-h~~~V~~lafspdg~~Las~-s~D 166 (945)
.+... ..+.. ......++++| +|.++++-...+.|..++...+........ .......|+|+|+|++|+.+ ...
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 33222 22222 23356788999 666666655678899999987654222221 22456899999999965554 456
Q ss_pred CcEEEEEccC--Cee--eeeecccCCCCCC--------CCCCce-EEEEc--------CCCCEEEEEeCCCeEEEEECCC
Q 002266 167 GTVIYWELQS--GRE--LHNLKRVAPDIGS--------DPSSMN-VLSWS--------PDGETLAVPGLKNDVVMYDRDT 225 (945)
Q Consensus 167 g~I~iwDl~t--~~~--i~~~~~~~~~~~~--------~~~~i~-~l~~s--------pdg~~La~gs~dg~I~vwD~~t 225 (945)
+.|..++... +.. +..+......... ...... .++.. ++|.++++-...+.|+.++. +
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~ 370 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-Q 370 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-T
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-C
Confidence 7899988763 221 1122111000000 011122 45553 34665555556778999984 4
Q ss_pred CcEEEeecC------C----------CCCCeEEEEEcC-CCCEEEEEECCCeEEEEECC
Q 002266 226 AEKLFSLRG------D----------HVQPICFLSWSP-NGKYMATSSLDRQILIWDVG 267 (945)
Q Consensus 226 ~~~~~~~~~------~----------h~~~I~~l~fSp-dg~~Lasgs~Dg~I~IWD~~ 267 (945)
+........ . .-.....++++| +|.++++-...+.|+.++++
T Consensus 371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 543322211 0 012478899999 46666666667788887754
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.05 E-value=0.0057 Score=69.19 Aligned_cols=233 Identities=11% Similarity=-0.011 Sum_probs=143.0
Q ss_pred CEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCCC----eeeeecccCCC
Q 002266 30 HHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPGG----EFQTNITRFTL 104 (945)
Q Consensus 30 ~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~g----~~~~~l~~~~~ 104 (945)
.+|+.+. ...|+..++.... ...+......+..|+|++.+..|+.+. ..+.|+.+++... .....+.....
T Consensus 84 ~~ll~~~--~~~I~~i~l~~~~--~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 84 AYLFFTN--RHEVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp CEEEEEE--TTEEEEECTTSCS--CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred ceeEEec--cceeEEEccCCcc--eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 3565554 5788888876542 222333456789999998666665554 5678888887652 22233333345
Q ss_pred CEEEEEEecCCCEEEEE-ECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC--CCcEEEEEccCCeeee
Q 002266 105 PIRVLAFNKSGSMLAAA-GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS--IGTVIYWELQSGRELH 181 (945)
Q Consensus 105 ~V~~l~fspdg~~Lasg-s~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~--Dg~I~iwDl~t~~~i~ 181 (945)
....+++.+.+..|+.+ ...+.|.+.++........+.........|+++|.+.+|+.+.. .+.|...++.......
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 67889999855555444 45678999998765544444444456899999997776666553 3678888876433222
Q ss_pred eecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecC-CCCCCeEEEEEcCCCCEEEEEECCC
Q 002266 182 NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRG-DHVQPICFLSWSPNGKYMATSSLDR 259 (945)
Q Consensus 182 ~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~-~h~~~I~~l~fSpdg~~Lasgs~Dg 259 (945)
.+. ......+.+++++++..|+++. ..+.|..+|+........+.. ........+++. .+.++++-...+
T Consensus 240 ~~~-------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~ 311 (400)
T 3p5b_L 240 LVT-------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 311 (400)
T ss_dssp EEC-------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSC
T ss_pred EEE-------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCC
Confidence 211 1123457899999777776664 467899999875433222221 122345566663 344555556677
Q ss_pred eEEEEECCCCeeeee
Q 002266 260 QILIWDVGKKLDIDR 274 (945)
Q Consensus 260 ~I~IWD~~~~~~i~~ 274 (945)
.|..+|..++..+..
T Consensus 312 ~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 312 AIFSANRLTGSDVNL 326 (400)
T ss_dssp SEEEEESSSCCCCEE
T ss_pred eEEEEEcCCCCceEE
Confidence 888888766655544
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.02 E-value=0.0031 Score=68.78 Aligned_cols=209 Identities=11% Similarity=0.032 Sum_probs=129.4
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCC---ccccccccccccceEEEEEecCCCEE-EEEEcCCcEEEEEcCCC
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLP---SNLPKILRHHRDGVTALALSPNSTCL-ASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~---~~~~~~l~~h~~~V~~la~spdg~~L-asgs~Dg~V~iwdl~~g 93 (945)
..+.+++|++.+..|+.+....+.|..++.... ......+.........+++.+.+..| ++-...+.|.++++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 457789999988888887667889999987651 12122222222456789998755545 44456789999998654
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECC--CcEEEEEcCCCeEEEEE-ecCCCCEEEEEEccCCCEEEEEe-CCCcE
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDD--EGIKLINTIDGSIARVL-KGHKGPVTGLAFDPNSEYLASID-SIGTV 169 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~D--g~I~iwd~~~~~~~~~l-~~h~~~V~~lafspdg~~Las~s-~Dg~I 169 (945)
.....+.........+++.|.+..|+.+... +.|..+++. +.....+ ...-.....|++++++..|+.+. ..+.|
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 3333333233567899999977766666543 678888874 3333333 23345678999999877766655 45689
Q ss_pred EEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec
Q 002266 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~ 233 (945)
..+|+... ....+.... ........+++. .+..+++-...+.|..++..+++.+..+.
T Consensus 189 ~~~d~dg~-~~~~~~~~~----~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 189 SSIDVNGG-NRKTILEDE----KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEEETTSC-SCEEEEECT----TTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEEecCCC-ceEEEeecC----CccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 99998643 222221110 011234567774 35555555567789999987776555543
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.01 E-value=0.0022 Score=70.14 Aligned_cols=233 Identities=14% Similarity=0.053 Sum_probs=140.5
Q ss_pred EEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEE-EEEcCCcEEEEEcCCCeee-eecccCCCCEEE
Q 002266 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLA-SGSIDHSVKLYKFPGGEFQ-TNITRFTLPIRV 108 (945)
Q Consensus 31 ~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~La-sgs~Dg~V~iwdl~~g~~~-~~l~~~~~~V~~ 108 (945)
+|+.+ ....|+..++.........+......+.+++|++.+..|+ +-...+.|..+++..+... ..+...-.....
T Consensus 6 ~ll~~--~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYA--NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEE--CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEE--ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 45555 3567888888654312222222234577999998555554 4445678999998765321 122222234567
Q ss_pred EEEecCCCEEEEE-ECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC--CCcEEEEEccCCeeeeeecc
Q 002266 109 LAFNKSGSMLAAA-GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS--IGTVIYWELQSGRELHNLKR 185 (945)
Q Consensus 109 l~fspdg~~Lasg-s~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~--Dg~I~iwDl~t~~~i~~~~~ 185 (945)
+++.+.+..|+.+ ...+.|.++++........+.........++++|.+..|+.+.. .+.|..+++.... ...+..
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~ 162 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIIN 162 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEEC
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEE
Confidence 8898755555444 45678999998654333333344566799999997666666653 5678888875432 222211
Q ss_pred cCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 002266 186 VAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264 (945)
Q Consensus 186 ~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IW 264 (945)
..-...+.++|+|++..|+++ +..+.|..+|+........+.. .......+++. .+.++.+-...+.|..+
T Consensus 163 ------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-~~~~P~glav~-~~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 163 ------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG-SLPHPFALTLF-EDILYWTDWSTHSILAC 234 (318)
T ss_dssp ------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-CCSCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred ------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecC-CCCCceEEEEe-CCEEEEEecCCCeEEEE
Confidence 112345789999977666665 4467899999874333222222 33456677775 33455555567889999
Q ss_pred ECCCCeeeee
Q 002266 265 DVGKKLDIDR 274 (945)
Q Consensus 265 D~~~~~~i~~ 274 (945)
+..++.....
T Consensus 235 ~~~~G~~~~~ 244 (318)
T 3sov_A 235 NKYTGEGLRE 244 (318)
T ss_dssp ETTTCCSCEE
T ss_pred ECCCCCceEE
Confidence 9877665443
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.00 E-value=0.00092 Score=76.59 Aligned_cols=243 Identities=8% Similarity=0.053 Sum_probs=141.4
Q ss_pred CCEEEEEECCC--CCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCC-----cEEEEEc
Q 002266 18 ASFCSILWDQQ--AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDH-----SVKLYKF 90 (945)
Q Consensus 18 ~~V~svafspd--g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg-----~V~iwdl 90 (945)
.....|+|+|+ +..|+++. ..+.|+.++..++. ...+.........|+|+++|+++++ ...+ .+..++.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D-~~~~I~~id~~~g~--v~~~~~~~~~P~giavd~dG~lyVa-d~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVG-QRDAFRHVDFVNQY--VDIKTTNIGQCADVNFTLNGDMVVV-DDQSSDTNTGIYLFTR 214 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEEC-BTSCEEEEETTTTE--EEEECCCCSCEEEEEECTTCCEEEE-ECCSCTTSEEEEEECG
T ss_pred CCCceEEEccccCCCEEEEEe-CCCCEEEEECCCCE--EEEeecCCCCccEEEECCCCCEEEE-cCCCCcccceEEEEEC
Confidence 44678999995 55566664 23889999976542 2223334456899999999994444 4321 1333332
Q ss_pred CCCee-eeecccCCCCEEEEEEec-CCCEEEEEECCCcEEEEEcCCCeEEEEE-ec-CCCCEEEEEEccCCCEEEEE-eC
Q 002266 91 PGGEF-QTNITRFTLPIRVLAFNK-SGSMLAAAGDDEGIKLINTIDGSIARVL-KG-HKGPVTGLAFDPNSEYLASI-DS 165 (945)
Q Consensus 91 ~~g~~-~~~l~~~~~~V~~l~fsp-dg~~Lasgs~Dg~I~iwd~~~~~~~~~l-~~-h~~~V~~lafspdg~~Las~-s~ 165 (945)
..+.. ...+. .......+++.| +|.++++-..++.|+.++..++.....+ .. ....-..|+|+|++++|+.+ ..
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 21110 01111 123346688999 6666555556778999998877653332 21 12233579999999966555 45
Q ss_pred CCcEEEEEccC--Cee--eeeecccCCCCC--------CCCCCceEEEE---------cCCCCEEEEEeCCCeEEEEECC
Q 002266 166 IGTVIYWELQS--GRE--LHNLKRVAPDIG--------SDPSSMNVLSW---------SPDGETLAVPGLKNDVVMYDRD 224 (945)
Q Consensus 166 Dg~I~iwDl~t--~~~--i~~~~~~~~~~~--------~~~~~i~~l~~---------spdg~~La~gs~dg~I~vwD~~ 224 (945)
.+.|+.++... +.. ...+........ ........+++ .++|.++++-...+.|+.++.
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~- 372 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP- 372 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-
Confidence 67899988652 221 111211100000 01123567898 677777777667789999986
Q ss_pred CCcEEEeecCCC-----------------CCCeEEEEEc-CCCCEEEEEECCCeEEEEECC
Q 002266 225 TAEKLFSLRGDH-----------------VQPICFLSWS-PNGKYMATSSLDRQILIWDVG 267 (945)
Q Consensus 225 t~~~~~~~~~~h-----------------~~~I~~l~fS-pdg~~Lasgs~Dg~I~IWD~~ 267 (945)
++.. ..+.+.. -.....|+++ ++|.++++-...+.|+.++++
T Consensus 373 ~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4543 3332210 1236788999 577766666667788887754
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.96 E-value=0.0021 Score=71.37 Aligned_cols=207 Identities=8% Similarity=-0.018 Sum_probs=128.6
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEE-EEEEcCCcEEEEEcCCCeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCL-ASGSIDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~L-asgs~Dg~V~iwdl~~g~~~ 96 (945)
..+..++|++.+..|+.+....+.|..++..... ....+.........+++.+.+..| ++-...+.|.++++......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCC-ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 4468899998888888776678899999876542 222222223456789999855554 44455678999998654333
Q ss_pred eecccCCCCEEEEEEecCCCEEEEEEC-C-CcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEE
Q 002266 97 TNITRFTLPIRVLAFNKSGSMLAAAGD-D-EGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYWE 173 (945)
Q Consensus 97 ~~l~~~~~~V~~l~fspdg~~Lasgs~-D-g~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwD 173 (945)
..+...-.....+++.|.+..|..+.. . +.|..+++............-.....|+++|++..|+.+. ..+.|..+|
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 333333456789999997666665543 3 6788888754332222222345678999998777666654 456899999
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~ 233 (945)
+........+.. .......+++ ..+..+++-...+.|..++..+++.+..+.
T Consensus 232 ~dG~~~~~~~~~-------~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 232 LDGSHRKAVISQ-------GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TTSCSCEEEECS-------SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCceEEEEeC-------CCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 864322221211 1123456777 344455555567788888866666555544
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.0017 Score=75.06 Aligned_cols=252 Identities=10% Similarity=0.072 Sum_probs=145.1
Q ss_pred CCEEEEEECC-CCCEEEEEEcCCCeEEEEcCCCCccccccccc---cccceEEEEE-------ecCCCEEEEEEcCC---
Q 002266 18 ASFCSILWDQ-QAHHLVTASSSETTISIHDPLLPSNLPKILRH---HRDGVTALAL-------SPNSTCLASGSIDH--- 83 (945)
Q Consensus 18 ~~V~svafsp-dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~---h~~~V~~la~-------spdg~~Lasgs~Dg--- 83 (945)
.....|+|+| ++..|+++....+.|++.|.... .+...... .......|+| +++|.+|+++...+
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 4577899999 46667766534567888887654 22222222 1235899999 99999777766554
Q ss_pred ----cEEEEEcCC-Ceee-----eecccCCCCEEEEEEecC-CCEEEEEECCCcEEEEEcC-------CCeE--------
Q 002266 84 ----SVKLYKFPG-GEFQ-----TNITRFTLPIRVLAFNKS-GSMLAAAGDDEGIKLINTI-------DGSI-------- 137 (945)
Q Consensus 84 ----~V~iwdl~~-g~~~-----~~l~~~~~~V~~l~fspd-g~~Lasgs~Dg~I~iwd~~-------~~~~-------- 137 (945)
.|.+++... +... ..+.... ....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ccCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 255665333 2321 1222222 3356788995 4555555567789999987 4543
Q ss_pred ---EEE-Ee-cCCCCEEEEEEccCCCEEEEE-eCCCcEEEEEccC--Cee--eeeecccCCCCC--------CCCCCce-
Q 002266 138 ---ARV-LK-GHKGPVTGLAFDPNSEYLASI-DSIGTVIYWELQS--GRE--LHNLKRVAPDIG--------SDPSSMN- 198 (945)
Q Consensus 138 ---~~~-l~-~h~~~V~~lafspdg~~Las~-s~Dg~I~iwDl~t--~~~--i~~~~~~~~~~~--------~~~~~i~- 198 (945)
... +. +.......|+|+|+|++|+.+ +..+.|+.++... +.. ...+.......+ ..-....
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 112 21 223456899999999965555 4567888866543 221 012221100000 0111233
Q ss_pred EEEEc-------CCCCEEEEEeCCCeEEEEECCCCcEEEeecCC-----------------------CCCCeEEEEEcCC
Q 002266 199 VLSWS-------PDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD-----------------------HVQPICFLSWSPN 248 (945)
Q Consensus 199 ~l~~s-------pdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~-----------------------h~~~I~~l~fSpd 248 (945)
.++.. ++|.++++=+..+.|+.++. ++. +.++.+. .-.....|+++++
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 44554 45666666667889999984 453 3333221 0123567888886
Q ss_pred -CCEEEEEECCCeEEEEECCCCeeee
Q 002266 249 -GKYMATSSLDRQILIWDVGKKLDID 273 (945)
Q Consensus 249 -g~~Lasgs~Dg~I~IWD~~~~~~i~ 273 (945)
|.++++=+....|+.+++.....+.
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECCCC---
T ss_pred CCEEEEEeCCCCEEEEEECCCCcccc
Confidence 7666666667888888877654443
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.94 E-value=0.0054 Score=69.37 Aligned_cols=212 Identities=10% Similarity=0.022 Sum_probs=133.4
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc---cccccccccccceEEEEEecCC-CEEEEEEcCCcEEEEEcCC
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPS---NLPKILRHHRDGVTALALSPNS-TCLASGSIDHSVKLYKFPG 92 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~---~~~~~l~~h~~~V~~la~spdg-~~Lasgs~Dg~V~iwdl~~ 92 (945)
...+..|+|++.+..|+.+....+.|+.+++.... .....+.........|++.+.+ .++++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 45688999999888888876677889888875421 1222233234567899999844 4444545678899999875
Q ss_pred CeeeeecccCCCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcE
Q 002266 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTV 169 (945)
Q Consensus 93 g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I 169 (945)
......+...-.....|++.|.+.+|+.+.. .+.|...++............-.....|++++++..|+.+. ..+.|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence 5443344333445789999997777766653 36798888864443333333346789999999877776664 45689
Q ss_pred EEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC
Q 002266 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~ 234 (945)
..+|+..... ..+.... ........+++. .+..+++-...+.|..+|..+++.+..+..
T Consensus 271 ~~~d~dG~~~-~~~~~~~----~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 271 SSIDVNGGNR-KTILEDE----KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EEEETTSCCC-EEEEECS----STTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred EEEeCCCCcc-EEEEeCC----CCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 9999865432 2221110 011223456662 334445555667899999777776655543
No 284
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.90 E-value=0.00022 Score=86.31 Aligned_cols=241 Identities=10% Similarity=0.029 Sum_probs=140.1
Q ss_pred EEEEec-CCCEEEEEEcCC-----------cEEEEEcCCCeeeee--cc-cCCCCEEEEEEecCCCEEEEEEC-CCcEEE
Q 002266 66 ALALSP-NSTCLASGSIDH-----------SVKLYKFPGGEFQTN--IT-RFTLPIRVLAFNKSGSMLAAAGD-DEGIKL 129 (945)
Q Consensus 66 ~la~sp-dg~~Lasgs~Dg-----------~V~iwdl~~g~~~~~--l~-~~~~~V~~l~fspdg~~Lasgs~-Dg~I~i 129 (945)
++++.+ ++++++.|+.+. .+.+||..+++.... +. .+......+++..+++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888887543 588999887653221 11 12223345677889999999984 457999
Q ss_pred EEcCCCeEEEEEecCC-CCEEEEEEccCCCEEEEEe-CC-----CcEEEEEccCCeeeeeeccc--CCCCCCCCCCceEE
Q 002266 130 INTIDGSIARVLKGHK-GPVTGLAFDPNSEYLASID-SI-----GTVIYWELQSGRELHNLKRV--APDIGSDPSSMNVL 200 (945)
Q Consensus 130 wd~~~~~~~~~l~~h~-~~V~~lafspdg~~Las~s-~D-----g~I~iwDl~t~~~i~~~~~~--~~~~~~~~~~i~~l 200 (945)
||..+..-...-..+. ..-.+++..+++++++.|+ .+ ..+.+||..+.+-... ... .+....... .
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~~p~~~~~~~----~ 344 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKVNPMLTADKQ----G 344 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCSGGGCCCCTT----G
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCcccccccccccc----c
Confidence 9998775433211111 1223456667899999888 34 4699999987653321 100 000000000 1
Q ss_pred EEcCCCCEEEEEeCC---------CeEEEEECCCCcEEEeecCC--------CCCCeEEEEEcC-CCCEEEEEECCC---
Q 002266 201 SWSPDGETLAVPGLK---------NDVVMYDRDTAEKLFSLRGD--------HVQPICFLSWSP-NGKYMATSSLDR--- 259 (945)
Q Consensus 201 ~~spdg~~La~gs~d---------g~I~vwD~~t~~~~~~~~~~--------h~~~I~~l~fSp-dg~~Lasgs~Dg--- 259 (945)
.+..++..++.|+.+ ..+..||..+.......... ....-.++.|.. ++++++.|+.++
T Consensus 345 ~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~ 424 (656)
T 1k3i_A 345 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424 (656)
T ss_dssp GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS
T ss_pred eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC
Confidence 122344444555433 45788888776533222110 011234455544 788888887542
Q ss_pred --------eEEEEECCCCeeeeec--c--CCCCeeEEEEecCCCEEEEEEcC-----------CeEEEEecCCCC
Q 002266 260 --------QILIWDVGKKLDIDRQ--K--FDDRICCMAWKPIGNALAVIDVM-----------GKYGVWESVVPS 311 (945)
Q Consensus 260 --------~I~IWD~~~~~~i~~~--~--~~~~V~~la~spdg~~Las~s~D-----------G~I~iWd~~~~~ 311 (945)
.|.+||..+....... . ....-.+++..|+++.+++|+.+ ..+.+||.....
T Consensus 425 ~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 425 SDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 6888888776544332 1 22223456677899999998754 457888876544
No 285
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.89 E-value=0.002 Score=72.52 Aligned_cols=207 Identities=8% Similarity=-0.016 Sum_probs=129.7
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEE-EEEcCCcEEEEEcCCCeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLA-SGSIDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~La-sgs~Dg~V~iwdl~~g~~~ 96 (945)
..+..++|++.+..|+.+....+.|+.++..... ....+.........+++.+.+..|+ +-...+.|.++++......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC-cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 4578899998888888776678899999876542 2222222234457788988555554 4445678888887654333
Q ss_pred eecccCCCCEEEEEEecCCCEEEEEEC-C-CcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEE
Q 002266 97 TNITRFTLPIRVLAFNKSGSMLAAAGD-D-EGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYWE 173 (945)
Q Consensus 97 ~~l~~~~~~V~~l~fspdg~~Lasgs~-D-g~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwD 173 (945)
..+...-.....+++.|.+..|..+.. . +.|..+++............-.....|+|+|++..|+.+. ..+.|..+|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 333333456789999997776666543 3 6788888754433333333345678999998777666554 456788898
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~ 233 (945)
+........+.. .......+++ ..+..+++-...+.|..++..+++.+..+.
T Consensus 275 ~dG~~~~~~~~~-------~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSHRKAVISQ-------GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCSCEEEECS-------SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCeeEEEEEC-------CCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 764322222211 1123456777 344455555567788888876676555554
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.86 E-value=0.0044 Score=67.80 Aligned_cols=207 Identities=11% Similarity=0.001 Sum_probs=128.9
Q ss_pred CEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEE-EEEEcCCcEEEEEcCCCeeee
Q 002266 19 SFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCL-ASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 19 ~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~L-asgs~Dg~V~iwdl~~g~~~~ 97 (945)
.+.+++|++.+..|+.+....+.|..++..........+.........+++.+.+..| ++-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 4678899998888887766788999998765422222233323456789999755444 444556889999986543222
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEEc
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYWEL 174 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwDl 174 (945)
.+.........+++.|.+..|+.+.. .+.|..+++............-.....|+++|++..|+.+. ..+.|..+|+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 23234456789999997667766653 57788888754332222233335678999999777666654 4678999998
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~ 233 (945)
.... ...+.. ........+++. .+..+++-...+.|..++..+++....+.
T Consensus 196 dG~~-~~~~~~------~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 196 DGTN-RQAVVK------GSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TSCS-CEEEEC------SCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCc-eEEEec------CCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 6432 222211 011234556664 33444444556789999987776554443
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=0.011 Score=68.22 Aligned_cols=239 Identities=15% Similarity=0.133 Sum_probs=140.7
Q ss_pred ceEEEEEec-CCCEEEEE-EcCCcEEEEEcCCCeeeeecccC---CCCEEEEEE-------ecCCCEEEEEECCC-----
Q 002266 63 GVTALALSP-NSTCLASG-SIDHSVKLYKFPGGEFQTNITRF---TLPIRVLAF-------NKSGSMLAAAGDDE----- 125 (945)
Q Consensus 63 ~V~~la~sp-dg~~Lasg-s~Dg~V~iwdl~~g~~~~~l~~~---~~~V~~l~f-------spdg~~Lasgs~Dg----- 125 (945)
....|+|+| +...|+.+ ...+.|++.|+.++.....+... ......++| +++|.+|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 457899998 34444444 44467999998887766544332 224889999 99999777776654
Q ss_pred --cEEEEEcCC-CeEE-----EEEecCCCCEEEEEEccC-CCEEEEEeCCCcEEEEEcc-------CCee----------
Q 002266 126 --GIKLINTID-GSIA-----RVLKGHKGPVTGLAFDPN-SEYLASIDSIGTVIYWELQ-------SGRE---------- 179 (945)
Q Consensus 126 --~I~iwd~~~-~~~~-----~~l~~h~~~V~~lafspd-g~~Las~s~Dg~I~iwDl~-------t~~~---------- 179 (945)
.|.+++... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266676433 2221 222222 23457889995 4555566677889999997 5543
Q ss_pred -eeeecccCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECC--CCcE--EEeecCC--C------------CCC
Q 002266 180 -LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRD--TAEK--LFSLRGD--H------------VQP 239 (945)
Q Consensus 180 -i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~--t~~~--~~~~~~~--h------------~~~ 239 (945)
...+... ........++|+|+|++|+++ +..+.|+.++.. ++.. ...+.+. . -..
T Consensus 299 ~~~~l~~~-----~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 299 TFKQLFTI-----ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp TEEEEEEC-----SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred ccceeEec-----CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 1111110 112345789999999965554 456789986653 3321 0112110 0 012
Q ss_pred eE-EEEEc-------CCCCEEEEEECCCeEEEEECCCCeeeeeccC------------------------CCCeeEEEEe
Q 002266 240 IC-FLSWS-------PNGKYMATSSLDRQILIWDVGKKLDIDRQKF------------------------DDRICCMAWK 287 (945)
Q Consensus 240 I~-~l~fS-------pdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~------------------------~~~V~~la~s 287 (945)
.. .++.. ++|.++++-...+.|+.++. ++.+....+. -....+|++.
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd 452 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYD 452 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEE
T ss_pred CeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEE
Confidence 34 45554 56777777777889999984 4443322111 1236789999
Q ss_pred cC-CCEEEEEEcCCeEEEEecC
Q 002266 288 PI-GNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 288 pd-g~~Las~s~DG~I~iWd~~ 308 (945)
++ |.++++=..+..|+.+++.
T Consensus 453 ~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 453 DVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEECC
Confidence 87 5444444455678877664
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.74 E-value=0.04 Score=65.88 Aligned_cols=204 Identities=12% Similarity=-0.019 Sum_probs=122.9
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEE-EcCCcEEEEEcCCCee
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG-SIDHSVKLYKFPGGEF 95 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasg-s~Dg~V~iwdl~~g~~ 95 (945)
......|+|++.+..|+.+-...+.|..++..........+.........|++.+.+..|+.+ ...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 355789999998888888765678898888754322122333333568899999966555554 4568999999865433
Q ss_pred eeecccCCCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEE
Q 002266 96 QTNITRFTLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYW 172 (945)
Q Consensus 96 ~~~l~~~~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iw 172 (945)
...+...-.....|++.|.+..|..+.. .+.|...++............-.....|++++++..|+.+. ..+.|..+
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 2233233445678999997666666653 35677777754333333333445678999999777666654 45678888
Q ss_pred EccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Q 002266 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK 228 (945)
Q Consensus 173 Dl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~ 228 (945)
|+........... . ..+ ...+++..+ ..+++-...+.|...|..+++.
T Consensus 199 ~~dG~~~~~~~~~---~-~~~---P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 199 NLDGTNRQAVVKG---S-LPH---PFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp SSSCCEEC----------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred cCCCCccEEEEeC---C-CCC---ceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 8764332221110 0 111 234666554 3333434567888888876653
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.71 E-value=0.0063 Score=66.80 Aligned_cols=191 Identities=17% Similarity=0.271 Sum_probs=125.3
Q ss_pred CCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEec----CCCE--EEEEEC----CCcEEEEEcC--CCeEEE
Q 002266 72 NSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNK----SGSM--LAAAGD----DEGIKLINTI--DGSIAR 139 (945)
Q Consensus 72 dg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fsp----dg~~--Lasgs~----Dg~I~iwd~~--~~~~~~ 139 (945)
...+++.....+-+.+||+ +|+.+..+.. +.+..+..-| .|+. ++.++. +++|.+|++. ++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456666677788999999 7887777653 5566666655 2322 334433 4689999773 333 43
Q ss_pred EEec------CC-CCEEEEEE--ccC-CC-EEEEEeCCCcEEEEEcc-------CCeeeeeecccCCCCCCCCCCceEEE
Q 002266 140 VLKG------HK-GPVTGLAF--DPN-SE-YLASIDSIGTVIYWELQ-------SGRELHNLKRVAPDIGSDPSSMNVLS 201 (945)
Q Consensus 140 ~l~~------h~-~~V~~laf--spd-g~-~Las~s~Dg~I~iwDl~-------t~~~i~~~~~~~~~~~~~~~~i~~l~ 201 (945)
.+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++++.. .+.+-.|.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--------gsq~Egcv 186 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--------NSQTEGMA 186 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--------SSCEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC--------CCCcceEE
Confidence 3311 11 45667777 774 44 68888889999999983 2344555543 23567788
Q ss_pred EcCCCCEEEEEeCCCeEEEEECC-----CCcEEEeecCCC-CCCeEEEEE--cCCCC-EEEEEE-CCCeEEEEECC-CCe
Q 002266 202 WSPDGETLAVPGLKNDVVMYDRD-----TAEKLFSLRGDH-VQPICFLSW--SPNGK-YMATSS-LDRQILIWDVG-KKL 270 (945)
Q Consensus 202 ~spdg~~La~gs~dg~I~vwD~~-----t~~~~~~~~~~h-~~~I~~l~f--Spdg~-~Lasgs-~Dg~I~IWD~~-~~~ 270 (945)
..+....|+++-.+..|..|+.+ +++.+..+...+ ...+..|++ .++|+ ||++++ .+.++.|||.. +.+
T Consensus 187 vDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp EETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCC
T ss_pred EcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCc
Confidence 99988899999988888888855 344555553323 347888887 45555 666666 57899999996 444
Q ss_pred eeee
Q 002266 271 DIDR 274 (945)
Q Consensus 271 ~i~~ 274 (945)
.+..
T Consensus 267 ~vg~ 270 (355)
T 3amr_A 267 YVAD 270 (355)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 290
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.68 E-value=0.094 Score=56.62 Aligned_cols=253 Identities=11% Similarity=0.090 Sum_probs=160.7
Q ss_pred CCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEE
Q 002266 39 ETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSML 118 (945)
Q Consensus 39 dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~L 118 (945)
...|.|.|+..+....+.-..-. +.-.+|..+.||.-. ..+++|+++++.+.+.... ...+|.--.|-.+ +.|
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~-~~L 120 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL-NTV 120 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS-SEE
T ss_pred CCEEEEEECCCCCCccccccccc----eeeeCCCccEEEEec-CCeEEEechHHhhhhccee-cCCccEEEEecCC-CeE
Confidence 44788889877654322111111 233588888777755 6789999999988776665 3568888888755 455
Q ss_pred EEEECCCcEEEEEcCC-CeEEEEEecC----CCCEEEEEEccCCCEEEEEeC-------CCcEEEEEccCCeeeeeeccc
Q 002266 119 AAAGDDEGIKLINTID-GSIARVLKGH----KGPVTGLAFDPNSEYLASIDS-------IGTVIYWELQSGRELHNLKRV 186 (945)
Q Consensus 119 asgs~Dg~I~iwd~~~-~~~~~~l~~h----~~~V~~lafspdg~~Las~s~-------Dg~I~iwDl~t~~~i~~~~~~ 186 (945)
+..+ +..|+.|++.. ..+.+.+..| ...|.....+++.++++..+- .|.+.+|+.+.+.. +.+.++
T Consensus 121 ~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGh 198 (365)
T 2xzh_A 121 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGH 198 (365)
T ss_dssp EEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCS
T ss_pred EEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-ceeeee
Confidence 5554 45799999975 3456666544 356778888999998776542 36788898876532 223322
Q ss_pred CCCCCCCCCCceEEEEcCCC-----CEEEEEeC---CCeEEEEECCCC---c-----EEEee--cC-CCCCCeEEEEEcC
Q 002266 187 APDIGSDPSSMNVLSWSPDG-----ETLAVPGL---KNDVVMYDRDTA---E-----KLFSL--RG-DHVQPICFLSWSP 247 (945)
Q Consensus 187 ~~~~~~~~~~i~~l~~spdg-----~~La~gs~---dg~I~vwD~~t~---~-----~~~~~--~~-~h~~~I~~l~fSp 247 (945)
... -..+-.+| +.++.+.. .+.+++.++... . ....+ +. ....-..++..|+
T Consensus 199 aa~---------F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ 269 (365)
T 2xzh_A 199 AAS---------FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE 269 (365)
T ss_dssp EEE---------EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET
T ss_pred eee---------eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc
Confidence 110 01111121 12333222 258889888542 1 11111 11 1233456688888
Q ss_pred CCCEEEEEECCCeEEEEECCCCeeeeeccC-CCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 248 NGKYMATSSLDRQILIWDVGKKLDIDRQKF-DDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 248 dg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~-~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
.-..++.-+.-|.|++||+.++.++..... .+.|..-+-+....-++.....|.|.--.+..
T Consensus 270 kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 270 KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 878899999999999999999999988554 45676666666666777888999877665543
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.68 E-value=0.0066 Score=66.60 Aligned_cols=190 Identities=13% Similarity=0.177 Sum_probs=123.9
Q ss_pred CCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccC----CC---EEEEEeC---CCcEEEEEcc-CCeeeee
Q 002266 114 SGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPN----SE---YLASIDS---IGTVIYWELQ-SGRELHN 182 (945)
Q Consensus 114 dg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspd----g~---~Las~s~---Dg~I~iwDl~-t~~~i~~ 182 (945)
...+++.....+.+.+||+ +|+.+..+.. +.++.+..-|. |+ +++++.. +++|.+|++. ....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3456666677788999999 8888888754 56777776662 22 2333333 4789999874 2223444
Q ss_pred ecccCCCCCCCCCCceEEEE--cCC-CC-EEEEEeCCCeEEEEECC-------CCcEEEeecCCCCCCeEEEEEcCCCCE
Q 002266 183 LKRVAPDIGSDPSSMNVLSW--SPD-GE-TLAVPGLKNDVVMYDRD-------TAEKLFSLRGDHVQPICFLSWSPNGKY 251 (945)
Q Consensus 183 ~~~~~~~~~~~~~~i~~l~~--spd-g~-~La~gs~dg~I~vwD~~-------t~~~~~~~~~~h~~~I~~l~fSpdg~~ 251 (945)
+.............+..+|+ +|. ++ ++++...+|.+..|++. +.+.+.++.. .+.+-.+...+...+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTEGMAADDEYGR 193 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcceEEEcCCCCe
Confidence 42210000011134455777 774 54 67788889999999883 3345666653 457888999998889
Q ss_pred EEEEECCCeEEEEECC-----CCeeeeeccC---CCCeeEEEE--ecCCC-EEEEEE-cCCeEEEEecC
Q 002266 252 MATSSLDRQILIWDVG-----KKLDIDRQKF---DDRICCMAW--KPIGN-ALAVID-VMGKYGVWESV 308 (945)
Q Consensus 252 Lasgs~Dg~I~IWD~~-----~~~~i~~~~~---~~~V~~la~--spdg~-~Las~s-~DG~I~iWd~~ 308 (945)
|+.+-.+..|..++.+ ++..+..... ...+..|+. .++++ +|++.+ .+..+.+|+..
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9999998777777755 3455555432 346888888 45566 566655 67789999985
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.62 E-value=0.02 Score=62.54 Aligned_cols=232 Identities=9% Similarity=0.019 Sum_probs=128.7
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccccc---ccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILR---HHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE 94 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~---~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~ 94 (945)
..+.+|.|++ +. +++++ ..+.|..-. .+......+. .+...+..|.+.+++..++++ .+|.|.. ....|+
T Consensus 80 ~~~~~i~~~~-~~-~~~~g-~~g~i~~S~--DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 80 YRFNSVSFQG-NE-GWIVG-EPPIMLHTT--DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK 152 (327)
T ss_dssp CEEEEEEEET-TE-EEEEE-ETTEEEEES--STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS
T ss_pred ccEEEEEecC-Ce-EEEEE-CCCeEEEEC--CCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC
Confidence 4688999986 44 44454 566554432 2222111111 233457788887777666554 5565432 223343
Q ss_pred eeeec-ccCCCCEEEEEEecCCCEEEEEECCCcEEEE-Ec--CCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEE
Q 002266 95 FQTNI-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLI-NT--IDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVI 170 (945)
Q Consensus 95 ~~~~l-~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iw-d~--~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~ 170 (945)
....+ ......+..+.+.+++.+++++ ..|.+..- |- .+.+.+ -......+..+++.+++..++ ++.+|.++
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~ 228 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLWM-IVNGGKIA 228 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEE-TTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEEE-EETTTEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEEE-EeCCceEE
Confidence 33222 2345578899999998877665 45555443 32 222222 223456789999999887654 45578777
Q ss_pred EEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC--CCCCCeEEEEEcCC
Q 002266 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG--DHVQPICFLSWSPN 248 (945)
Q Consensus 171 iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~--~h~~~I~~l~fSpd 248 (945)
+++...++.-..+.. +.. .....+..+.+.+++..++++. ++.| ++..+.++.-..+.. .....+.++.|.++
T Consensus 229 ~s~~D~G~tW~~~~~--~~~-~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 229 FSDPDNSENWGELLS--PLR-RNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp EEETTEEEEECCCBC--TTS-SCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET
T ss_pred EecCCCCCeeEeccC--Ccc-cCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC
Confidence 664222333222211 101 1123477889998888777664 6766 344444433222221 13456788989866
Q ss_pred CCEEEEEECCCeEEEEEC
Q 002266 249 GKYMATSSLDRQILIWDV 266 (945)
Q Consensus 249 g~~Lasgs~Dg~I~IWD~ 266 (945)
+. +++++.+|.|.-++-
T Consensus 304 ~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 304 DQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp TE-EEEECSTTEEEEECC
T ss_pred Cc-eEEEcCCceEEEEcC
Confidence 55 556666887776653
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.59 E-value=0.013 Score=64.86 Aligned_cols=228 Identities=13% Similarity=0.158 Sum_probs=120.4
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeee--eecc---cCCCCEEEEEEecC---CCEEEEEEC-C-----CcE
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQ--TNIT---RFTLPIRVLAFNKS---GSMLAAAGD-D-----EGI 127 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~--~~l~---~~~~~V~~l~fspd---g~~Lasgs~-D-----g~I 127 (945)
.....|+|.|+|+++++ ...|.|++++ ++... ..+. ........|+|+|+ +..|.++.. . ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45689999999985555 6679999998 44422 1111 12346889999998 555555443 2 568
Q ss_pred EEEEcCCCe-----EE-EEEe---cCCCCEEEEEEccCCCEEEEEeCC-------------CcEEEEEccCCeeeee--e
Q 002266 128 KLINTIDGS-----IA-RVLK---GHKGPVTGLAFDPNSEYLASIDSI-------------GTVIYWELQSGRELHN--L 183 (945)
Q Consensus 128 ~iwd~~~~~-----~~-~~l~---~h~~~V~~lafspdg~~Las~s~D-------------g~I~iwDl~t~~~i~~--~ 183 (945)
..|+...+. .+ ..+. ........|+|.|+|.++++.+.. |.|.-++... ..... +
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~npf 186 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EPAPGNPF 186 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CCCCCCcc
Confidence 888876432 11 1122 111234689999999766654321 3454444432 10000 0
Q ss_pred cc---cCCCC-CCCCCCceEEEEcC-CCCEEEEEeCCCe--------EEEEECCC----------------CcEEEeecC
Q 002266 184 KR---VAPDI-GSDPSSMNVLSWSP-DGETLAVPGLKND--------VVMYDRDT----------------AEKLFSLRG 234 (945)
Q Consensus 184 ~~---~~~~~-~~~~~~i~~l~~sp-dg~~La~gs~dg~--------I~vwD~~t----------------~~~~~~~~~ 234 (945)
.. ..... .........++|+| +|.++++-...+. |.+..... ..++..+.
T Consensus 187 ~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~- 265 (352)
T 2ism_A 187 LGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP- 265 (352)
T ss_dssp TTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-
T ss_pred cCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-
Confidence 00 00000 00011245689999 6665555332222 33332211 01122221
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe-------eeeeccCCCCeeEEEEecCCCEEEEE
Q 002266 235 DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKL-------DIDRQKFDDRICCMAWKPIGNALAVI 296 (945)
Q Consensus 235 ~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~-------~i~~~~~~~~V~~la~spdg~~Las~ 296 (945)
+......++| .+|.++++.-..+.|...++.... ..........+.++++.|+|.++++.
T Consensus 266 -~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 266 -QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp -TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred -CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 2234566777 467766666667778887775432 11112223578999999999765554
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.58 E-value=0.0071 Score=65.83 Aligned_cols=204 Identities=12% Similarity=0.161 Sum_probs=126.4
Q ss_pred EEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccc----c--ccceEEEEE---ecCCCEEEEEEc-----------
Q 002266 22 SILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH----H--RDGVTALAL---SPNSTCLASGSI----------- 81 (945)
Q Consensus 22 svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~----h--~~~V~~la~---spdg~~Lasgs~----------- 81 (945)
+++|++....++++.-..++|..|+...+......+.+ . ...+..|.| .|+++++++...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 56798877777777668899999998644222222221 1 113579999 688777775442
Q ss_pred --CCcEEEEEcC---CCeeeeecc--c-----------CCCCEEEEEEecCCCEEEEEECC-CcEEEEEcCCCeEEEEEe
Q 002266 82 --DHSVKLYKFP---GGEFQTNIT--R-----------FTLPIRVLAFNKSGSMLAAAGDD-EGIKLINTIDGSIARVLK 142 (945)
Q Consensus 82 --Dg~V~iwdl~---~g~~~~~l~--~-----------~~~~V~~l~fspdg~~Lasgs~D-g~I~iwd~~~~~~~~~l~ 142 (945)
+..|..||+. +++...... . ......+++..++|+..++++.. +.|..++.... .+..+.
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~ 175 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFA 175 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeee
Confidence 5779999998 676553322 1 11347899999999999999988 88888877543 232221
Q ss_pred -c-----CCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccC-CCCCCCCCCceEE-EEcCCCCEEEEE-e
Q 002266 143 -G-----HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVA-PDIGSDPSSMNVL-SWSPDGETLAVP-G 213 (945)
Q Consensus 143 -~-----h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~-~~~~~~~~~i~~l-~~spdg~~La~g-s 213 (945)
. .....+.|+++|+|..|++....|.|..+|+...... .+.... ... ........+ .--.+|+.++++ .
T Consensus 176 ~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~-~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 176 WESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDF-GTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp ECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCC-CCCTTEEEEEEEEETTEEEEEEEE
T ss_pred ecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCc-ccccCcccccccccCCEEEEEEcC
Confidence 1 1123669999999999998877999999998743210 111100 000 011122333 333477775554 3
Q ss_pred CCCeEEEEECCCCcE
Q 002266 214 LKNDVVMYDRDTAEK 228 (945)
Q Consensus 214 ~dg~I~vwD~~t~~~ 228 (945)
..+.+.+.+.+.|+.
T Consensus 254 ~~~~~~l~S~DgW~s 268 (334)
T 2p9w_A 254 APYAISFRSWDNWKS 268 (334)
T ss_dssp TTEEEEEECSSTTSE
T ss_pred CCCEEEEECCCCcce
Confidence 455666666665553
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.57 E-value=0.012 Score=64.00 Aligned_cols=203 Identities=8% Similarity=0.057 Sum_probs=125.9
Q ss_pred eEEEEEecCCCEEEEEE-cCCcEEEEEcCCCeeeee-cccC----C--CCEEEEEE---ecCCCEEEEEEC---------
Q 002266 64 VTALALSPNSTCLASGS-IDHSVKLYKFPGGEFQTN-ITRF----T--LPIRVLAF---NKSGSMLAAAGD--------- 123 (945)
Q Consensus 64 V~~la~spdg~~Lasgs-~Dg~V~iwdl~~g~~~~~-l~~~----~--~~V~~l~f---spdg~~Lasgs~--------- 123 (945)
..+++|++....|..++ ..++|..|+...+..... +... . ..+..|.| .|+++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34788988655666655 789999999875543322 2211 1 13578999 588777775431
Q ss_pred ----CCcEEEEEcC---CCeEEEEEe--cC-----------CCCEEEEEEccCCCEEEEEeCC-CcEEEEEccCCeeeee
Q 002266 124 ----DEGIKLINTI---DGSIARVLK--GH-----------KGPVTGLAFDPNSEYLASIDSI-GTVIYWELQSGRELHN 182 (945)
Q Consensus 124 ----Dg~I~iwd~~---~~~~~~~l~--~h-----------~~~V~~lafspdg~~Las~s~D-g~I~iwDl~t~~~i~~ 182 (945)
+..|..||+. +++.+.... .. ......++.+++|+..++++.. +.|..++.... .+..
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEee
Confidence 5679999998 776655443 11 1247899999999999988887 77777665433 2222
Q ss_pred ecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-EEeec--CC--CCCCeEEE-EEcCCCCE-EEEE
Q 002266 183 LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK-LFSLR--GD--HVQPICFL-SWSPNGKY-MATS 255 (945)
Q Consensus 183 ~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~-~~~~~--~~--h~~~I~~l-~fSpdg~~-Lasg 255 (945)
+....+ ........+.|+++|+|+.|++....+.|..+|+.+... ..... +. .......+ ..-.+|+. |++.
T Consensus 174 ~~~~~~-~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 174 FAWESG-NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEECCC-CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eeecCC-CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 211111 112234567899999999998887799999999885332 01111 21 11223443 33347777 4555
Q ss_pred ECCCeEEEEECCC
Q 002266 256 SLDRQILIWDVGK 268 (945)
Q Consensus 256 s~Dg~I~IWD~~~ 268 (945)
...+.+.+.+.+.
T Consensus 253 ~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 253 RAPYAISFRSWDN 265 (334)
T ss_dssp ETTEEEEEECSST
T ss_pred CCCCEEEEECCCC
Confidence 5566666655544
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.53 E-value=0.068 Score=63.92 Aligned_cols=159 Identities=15% Similarity=-0.008 Sum_probs=96.6
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEc--CCcEEEEEcCCCee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI--DHSVKLYKFPGGEF 95 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~--Dg~V~iwdl~~g~~ 95 (945)
.....+++++.+..|+.+....+.|.+.+.... .....+.........|++.|.+.+|+.+.. .+.|...++.....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence 567889999988888888767889999997643 222222234456789999997656655543 46677777654332
Q ss_pred eeecccCCCCEEEEEEecCCCEEEEEE-CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEc
Q 002266 96 QTNITRFTLPIRVLAFNKSGSMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWEL 174 (945)
Q Consensus 96 ~~~l~~~~~~V~~l~fspdg~~Lasgs-~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl 174 (945)
...+...-.....|++.+++..|..+. ..+.|..+++..........+......+|++..+ ..+++-...+.|...|.
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 222322344678999999777776664 4567888888654332222212222345676654 33333344567888887
Q ss_pred cCCe
Q 002266 175 QSGR 178 (945)
Q Consensus 175 ~t~~ 178 (945)
.+++
T Consensus 242 ~tg~ 245 (619)
T 3s94_A 242 YTGE 245 (619)
T ss_dssp SSCC
T ss_pred CCCc
Confidence 6654
No 297
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.51 E-value=0.027 Score=69.23 Aligned_cols=210 Identities=11% Similarity=0.015 Sum_probs=129.1
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCc---cccccccccccceEEEEEecCCCEEEEE-EcCCcEEEEEcCC
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPS---NLPKILRHHRDGVTALALSPNSTCLASG-SIDHSVKLYKFPG 92 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~---~~~~~l~~h~~~V~~la~spdg~~Lasg-s~Dg~V~iwdl~~ 92 (945)
...+..|+|++.+..|+.+....+.|+.+++.... .....+.........|++.+.+..|+.+ ...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 35678999999888888776677889888875421 1122233234566789999877555544 4568999999875
Q ss_pred CeeeeecccCCCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcE
Q 002266 93 GEFQTNITRFTLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTV 169 (945)
Q Consensus 93 g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I 169 (945)
......+...-.....|++.|.+.+|+.+.. .+.|.+.++........+...-.....|++++.+..|+.+. ..+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 5433333334456889999998777766653 26788888865444333443446789999998777776664 45678
Q ss_pred EEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEEEeec
Q 002266 170 IYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVP-GLKNDVVMYDRDTAEKLFSLR 233 (945)
Q Consensus 170 ~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~g-s~dg~I~vwD~~t~~~~~~~~ 233 (945)
..+++........+... ........|++. +.+|++. ...+.|...+..+++.+..+.
T Consensus 583 ~~~d~dG~~~~~v~~~~-----~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDE-----KRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEETTSCSCEEEEECT-----TTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEEecCCCceEEEecCC-----CccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 88888554332222110 001122345553 3344444 445778888877776554443
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.50 E-value=0.054 Score=66.54 Aligned_cols=232 Identities=11% Similarity=-0.015 Sum_probs=136.5
Q ss_pred EEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEE-EcCCcEEEEEcCCC----eeeeecccCCCC
Q 002266 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG-SIDHSVKLYKFPGG----EFQTNITRFTLP 105 (945)
Q Consensus 31 ~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasg-s~Dg~V~iwdl~~g----~~~~~l~~~~~~ 105 (945)
+|+.+ ....|+..++.... ...+......+.+|+|++....|+.+ ...+.|+.+++... .....+......
T Consensus 397 ~Ll~a--n~~~Ir~i~l~~~~--~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~ 472 (791)
T 3m0c_C 397 YLFFT--NRHEVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 472 (791)
T ss_dssp EEEEE--CBSSEEEECTTSCC--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred ccccc--cccceeEeeccCCc--ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCC
Confidence 45554 34567777765432 22233335677899999855555544 45678888888652 222333323445
Q ss_pred EEEEEEecCCCEEEEE-ECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC--CCcEEEEEccCCeeeee
Q 002266 106 IRVLAFNKSGSMLAAA-GDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS--IGTVIYWELQSGRELHN 182 (945)
Q Consensus 106 V~~l~fspdg~~Lasg-s~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~--Dg~I~iwDl~t~~~i~~ 182 (945)
...|++.+.+..|+.+ ...+.|.+.++........+.........|+++|.+.+|+.+.. .+.|.+.++........
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l 552 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 552 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence 6789999877666555 45678999998655443344444566899999998666666653 26788888764433222
Q ss_pred ecccCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecC-CCCCCeEEEEEcCCCCEEEEEECCCe
Q 002266 183 LKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRG-DHVQPICFLSWSPNGKYMATSSLDRQ 260 (945)
Q Consensus 183 ~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~-~h~~~I~~l~fSpdg~~Lasgs~Dg~ 260 (945)
+. ......+.|++++.+..|+++. ..+.|..+++........+.. ........|++.. ++++++-...+.
T Consensus 553 v~-------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~ 624 (791)
T 3m0c_C 553 VT-------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA 624 (791)
T ss_dssp EC-------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTE
T ss_pred Ee-------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCE
Confidence 21 1123467899998766666654 456899999875443333322 1122344565532 233444445677
Q ss_pred EEEEECCCCeeeee
Q 002266 261 ILIWDVGKKLDIDR 274 (945)
Q Consensus 261 I~IWD~~~~~~i~~ 274 (945)
|...+..++..+..
T Consensus 625 I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 625 IFSANRLTGSDVNL 638 (791)
T ss_dssp EEEEETTTCCCCEE
T ss_pred EEEEeCCCCcceEE
Confidence 77777666644433
No 299
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.49 E-value=0.17 Score=56.77 Aligned_cols=254 Identities=11% Similarity=0.085 Sum_probs=161.1
Q ss_pred CCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCE
Q 002266 38 SETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM 117 (945)
Q Consensus 38 ~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~ 117 (945)
....|.|.|+..+....+.-..- -+.-.+|..+.||.-. ..+++|+++.+.+.+.... ...+|.--.|-.+ +.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~A----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~-~~e~VvfWkWis~-~~ 118 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL-NT 118 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCC----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEEEET-TE
T ss_pred CCCeEEEEECCCCCcceeccccc----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee-cCCCceEEEecCC-Ce
Confidence 34478888887764432211111 1334588877777655 6789999999988776665 3456777777655 44
Q ss_pred EEEEECCCcEEEEEcCC-CeEEEEEecC----CCCEEEEEEccCCCEEEEEeC-------CCcEEEEEccCCeeeeeecc
Q 002266 118 LAAAGDDEGIKLINTID-GSIARVLKGH----KGPVTGLAFDPNSEYLASIDS-------IGTVIYWELQSGRELHNLKR 185 (945)
Q Consensus 118 Lasgs~Dg~I~iwd~~~-~~~~~~l~~h----~~~V~~lafspdg~~Las~s~-------Dg~I~iwDl~t~~~i~~~~~ 185 (945)
|+..+ +..|+.|++.. ..+.+.+..| ...|.....+++.++++..+- .|.+.+|+.+.+.. +.+.+
T Consensus 119 l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieG 196 (494)
T 1bpo_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEG 196 (494)
T ss_dssp EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECC
T ss_pred EEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chhee
Confidence 55543 55799999974 3456666544 356888888999998875442 36788888766532 22332
Q ss_pred cCCCCCCCCCCceEEEEcCCC-----CEEEEEeC---CCeEEEEECCCC--------cEEEeecC---CCCCCeEEEEEc
Q 002266 186 VAPDIGSDPSSMNVLSWSPDG-----ETLAVPGL---KNDVVMYDRDTA--------EKLFSLRG---DHVQPICFLSWS 246 (945)
Q Consensus 186 ~~~~~~~~~~~i~~l~~spdg-----~~La~gs~---dg~I~vwD~~t~--------~~~~~~~~---~h~~~I~~l~fS 246 (945)
+... . ..+-.+| ..++.+.. .+.++|.++... +....+.- ....-..++..|
T Consensus 197 haa~-------F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs 267 (494)
T 1bpo_A 197 HAAS-------F--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS 267 (494)
T ss_dssp SEEE-------E--EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEE
T ss_pred eeee-------e--EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEec
Confidence 2110 0 1111121 13333332 368999988543 11122111 112345678889
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeeeeeccC-CCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 247 PNGKYMATSSLDRQILIWDVGKKLDIDRQKF-DDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 247 pdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~-~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
+.-..++..+.-|.|.+||+.++.++..... ...|...+-+....-++.....|.|.--.+..
T Consensus 268 ~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 268 EKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp TTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred ccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 9888899999999999999999999988554 45676666666666788888999877665543
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.43 E-value=0.13 Score=61.63 Aligned_cols=230 Identities=11% Similarity=-0.053 Sum_probs=140.6
Q ss_pred CEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEE-EcCCcEEEEEcCCCeeeeecccCCCCEEE
Q 002266 30 HHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG-SIDHSVKLYKFPGGEFQTNITRFTLPIRV 108 (945)
Q Consensus 30 ~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasg-s~Dg~V~iwdl~~g~~~~~l~~~~~~V~~ 108 (945)
.+|+.+ ....|+..++.............-..+..|+|++.+..|+.+ ..++.|+.+++........+.........
T Consensus 7 ~~Ll~s--~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 7 AFLLFS--RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp CEEEEE--ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred cEEEEE--eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 456665 367888888865422111111223567899999966666554 45688999988655433333322345678
Q ss_pred EEEecCCCEEEEEE-CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC--CCcEEEEEccCCeeeeeecc
Q 002266 109 LAFNKSGSMLAAAG-DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS--IGTVIYWELQSGRELHNLKR 185 (945)
Q Consensus 109 l~fspdg~~Lasgs-~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~--Dg~I~iwDl~t~~~i~~~~~ 185 (945)
+++.+.+..|+.+. ..+.|.+.++........+...-.....|+++|...+|+.+.. .+.|...++..... ..+..
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~ 163 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVP 163 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEEC
Confidence 89987666555554 4678999998654332233344456799999996666666553 46777777754432 22211
Q ss_pred cCCCCCCCCCCceEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 002266 186 VAPDIGSDPSSMNVLSWSPDGETLAVPG-LKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIW 264 (945)
Q Consensus 186 ~~~~~~~~~~~i~~l~~spdg~~La~gs-~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IW 264 (945)
.....+.+++++++..|+++. ..+.|..+|+..... ..+.. .......+++.. +.++++-...+.|...
T Consensus 164 -------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~-~l~~P~glav~~-~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 164 -------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD-DLPHPFGLTQYQ-DYIYWTDWSRRSIERA 233 (628)
T ss_dssp -------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE-CCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred -------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec-cCCCceEEEEEC-CEEEEecCCCCEEEEE
Confidence 123467899999777666654 467899999875443 22222 223455677754 4444454557888888
Q ss_pred ECCCCeee
Q 002266 265 DVGKKLDI 272 (945)
Q Consensus 265 D~~~~~~i 272 (945)
|..++...
T Consensus 234 dk~tg~~~ 241 (628)
T 4a0p_A 234 NKTSGQNR 241 (628)
T ss_dssp ETTTCCSC
T ss_pred ECCCCCce
Confidence 87666443
No 301
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.42 E-value=0.27 Score=60.06 Aligned_cols=271 Identities=10% Similarity=0.047 Sum_probs=159.8
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeee
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~ 96 (945)
...|.+|.-..+|..-+.+ .+| +..||...-.............|.++....+| .|..|+.+| +..||..+....
T Consensus 21 ~n~V~~I~qD~~G~lWigT--~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGS--NKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECTTSCEEEEE--SSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC
T ss_pred cceEEEEEECCCCCEEEEE--CCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE
Confidence 4679999999888755543 455 66777432111100001123568888877776 566666665 789998776543
Q ss_pred eecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEe----cCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 002266 97 TNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLK----GHKGPVTGLAFDPNSEYLASIDSIGTVIYW 172 (945)
Q Consensus 97 ~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~----~h~~~V~~lafspdg~~Las~s~Dg~I~iw 172 (945)
.........|.++.. .+| .|.+++.+ .|..+|..++....... .....|.++..+.+|.+.+ ++.+ .|..|
T Consensus 96 ~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~ 170 (758)
T 3ott_A 96 QPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRY 170 (758)
T ss_dssp CCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEE
T ss_pred CcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhC
Confidence 321112345777654 344 56667666 68889987765432211 1235688998888887655 4444 57788
Q ss_pred EccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEE
Q 002266 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYM 252 (945)
Q Consensus 173 Dl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~L 252 (945)
+..++.... +... .........|.++....++..|.+|+. +.+..||..+++... +.......|.++....+|.+.
T Consensus 171 ~~~~~~~~~-~~~~-~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lW 246 (758)
T 3ott_A 171 IPSNGKFEG-IPLP-VHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAFHNNSIKSLALDGNGDLL 246 (758)
T ss_dssp ETTTTEEEE-ECCC-CCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEEEEEEEEEEEECTTCCEE
T ss_pred ccCCCceEE-ecCC-CccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCCCCCeEEEEEEcCCCCEE
Confidence 877665322 2111 111111234777888777777777774 568899987765322 111123458888888888765
Q ss_pred EEEECCCeEEEEECCCCeeeeecc--------CCCCeeEEEEecCCCEEEEEEcCCeEEEE
Q 002266 253 ATSSLDRQILIWDVGKKLDIDRQK--------FDDRICCMAWKPIGNALAVIDVMGKYGVW 305 (945)
Q Consensus 253 asgs~Dg~I~IWD~~~~~~i~~~~--------~~~~V~~la~spdg~~Las~s~DG~I~iW 305 (945)
+. +. +-|.+++..++....... ....|.++....+|... .|+..| +.++
T Consensus 247 ig-T~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~~G-l~~~ 303 (758)
T 3ott_A 247 AG-TD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIW-LGTDYG-ISLS 303 (758)
T ss_dssp EE-ET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEE-EEESSS-EEEE
T ss_pred EE-eC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEE-EEeCCc-cccc
Confidence 54 44 458889887754432211 12458888877777644 455556 5443
No 302
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.42 E-value=0.19 Score=64.38 Aligned_cols=281 Identities=11% Similarity=0.052 Sum_probs=158.0
Q ss_pred CCCEEEEEECCC------CCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEec--CCCEEEEEEcCCcEEEE
Q 002266 17 AASFCSILWDQQ------AHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSP--NSTCLASGSIDHSVKLY 88 (945)
Q Consensus 17 ~~~V~svafspd------g~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~sp--dg~~Lasgs~Dg~V~iw 88 (945)
...|.|+++.|. +++++++...|++|+|+++.........--+......++.+.. ...+|..|-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 357999999864 3688888745999999998653221111111112344444432 33578888999988766
Q ss_pred EcC--CCeeeee--cccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCE-EEEEEccC--CCEEE
Q 002266 89 KFP--GGEFQTN--ITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPV-TGLAFDPN--SEYLA 161 (945)
Q Consensus 89 dl~--~g~~~~~--l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V-~~lafspd--g~~La 161 (945)
.+. +|..... ..-...++.-..+...|..-+.+..+....++.-. +..... .-.-..+ ....|+.. .+-++
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~~~~g~v 710 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDGYPDSLA 710 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSSSTTEEE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcccCCCcEE
Confidence 654 4443321 11124466655565555554445556655555543 332222 1111223 33345432 23354
Q ss_pred EEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC---------------------------
Q 002266 162 SIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL--------------------------- 214 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~--------------------------- 214 (945)
..+ ++.++|..+..-......... -...+..++++|..+.+++++.
T Consensus 711 ~~~-~~~LrI~~i~~~~~~~~~~ip------L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1158)
T 3ei3_A 711 LAN-NSTLTIGTIDEIQKLHIRTVP------LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV 783 (1158)
T ss_dssp EEC-SSCEEEEEECCSSSEEEEEEE------CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred EEc-CCceEEEEecccCCeeEEEEe------CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence 444 456888887543322211111 1235677888887665554331
Q ss_pred ----------------------CCeEEEEECCCCcEEEeecCCCCCCeEEEE---EcCC-CCEEEEEE----------CC
Q 002266 215 ----------------------KNDVVMYDRDTAEKLFSLRGDHVQPICFLS---WSPN-GKYMATSS----------LD 258 (945)
Q Consensus 215 ----------------------dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~---fSpd-g~~Lasgs----------~D 258 (945)
.+.|+++|..+++.+..+.-.....+.+++ |..+ ..+|+.|+ ..
T Consensus 784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~ 863 (1158)
T 3ei3_A 784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQ 863 (1158)
T ss_dssp CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCC
T ss_pred cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCc
Confidence 124788888888877666543445555555 3322 46888887 34
Q ss_pred CeEEEEECCCCee--eeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 259 RQILIWDVGKKLD--IDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 259 g~I~IWD~~~~~~--i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
|.|++|++..++. +......+.|++++-- .| +|+++ ....|++|++..
T Consensus 864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~-ig~~l~vy~l~~ 913 (1158)
T 3ei3_A 864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLAS-INSTVRLYEWTT 913 (1158)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEE-ETTEEEEEEECT
T ss_pred eEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEE-cCCEEEEEECCC
Confidence 8899999965433 3334557888888744 34 44443 357899998753
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.38 E-value=0.038 Score=61.24 Aligned_cols=235 Identities=14% Similarity=0.086 Sum_probs=125.1
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcccccc---ccccccceEEEEEecC---CCEEEEEEc----C----C
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKI---LRHHRDGVTALALSPN---STCLASGSI----D----H 83 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~---l~~h~~~V~~la~spd---g~~Lasgs~----D----g 83 (945)
..-..|+|.|+|+.+++- .++.|++++. .+...... ..........|+++|+ +..|+++.. + +
T Consensus 29 ~~P~~ia~~pdG~l~V~e--~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTE--RPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEEEE--TTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEEEe--CCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 557889999999855543 5699999973 32211111 1122356889999997 445544433 2 5
Q ss_pred cEEEEEcCCC--e---ee---eeccc-CCCCEEEEEEecCCCEEEEEECC-------------CcEEEEEcCCC------
Q 002266 84 SVKLYKFPGG--E---FQ---TNITR-FTLPIRVLAFNKSGSMLAAAGDD-------------EGIKLINTIDG------ 135 (945)
Q Consensus 84 ~V~iwdl~~g--~---~~---~~l~~-~~~~V~~l~fspdg~~Lasgs~D-------------g~I~iwd~~~~------ 135 (945)
.|..|+.... . .. ..+.. .......++|.|+|.++++.++. |.|..++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777877654 1 11 11211 11234679999999876664432 45655555321
Q ss_pred --eEEEEEecCCCCEEEEEEcc-CCCEEEEEeCCCc-EEEEEccCCeeee--------eeccc-CCCCC--CCCCCceEE
Q 002266 136 --SIARVLKGHKGPVTGLAFDP-NSEYLASIDSIGT-VIYWELQSGRELH--------NLKRV-APDIG--SDPSSMNVL 200 (945)
Q Consensus 136 --~~~~~l~~h~~~V~~lafsp-dg~~Las~s~Dg~-I~iwDl~t~~~i~--------~~~~~-~~~~~--~~~~~i~~l 200 (945)
.......++.. ...++|+| ++.++++-..... -.|.-+..+.... ..... .+... ........+
T Consensus 186 f~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 186 FPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp STTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 01111234433 46899999 6665554322221 1122122221100 00000 00000 112345677
Q ss_pred EEc-------CCCCEEEEEeCCCeEEEEECCCC-cEE--EeecCCCCCCeEEEEEcCCCCEEEEEE
Q 002266 201 SWS-------PDGETLAVPGLKNDVVMYDRDTA-EKL--FSLRGDHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 201 ~~s-------pdg~~La~gs~dg~I~vwD~~t~-~~~--~~~~~~h~~~I~~l~fSpdg~~Lasgs 256 (945)
+|. .+|.++++....+.|..+++... ... ..+.......+..+++.|+|.++++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 883 46777766666778999988753 221 233221345789999999997666654
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.35 E-value=0.12 Score=55.85 Aligned_cols=242 Identities=13% Similarity=0.083 Sum_probs=151.5
Q ss_pred EEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC-Ceeeeeccc
Q 002266 23 ILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG-GEFQTNITR 101 (945)
Q Consensus 23 vafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~-g~~~~~l~~ 101 (945)
.-.+|..+.||.-. ..++.|+|+++...+. ...- ...|.--.|-.+. .|+..+. ..|+-|++.. ..+.+.+.+
T Consensus 72 AIMnP~~~ViALra--g~~LQiFnletK~klk-s~~~-~e~VvfWkWis~~-~L~lVT~-taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 72 AIMNPASKVIALKA--GKTLQIFNIEMKSKMK-AHTM-TDDVTFWKWISLN-TVALVTD-NAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EEECSSSSEEEEEE--TTEEEEEETTTTEEEE-EEEC-SSCEEEEEECSSS-EEEEEES-SEEEEEESSTTCCCEEEEEC
T ss_pred eeeCCCccEEEEec--CCeEEEechHHhhhhc-ceec-CCccEEEEecCCC-eEEEEcC-CcEEEEcccCCCCCceeeec
Confidence 34688888888764 6789999998874432 2222 4678888887654 5555443 5799999864 344555555
Q ss_pred C----CCCEEEEEEecCCCEEEEEEC-------CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccC---CCEEEEEeC--
Q 002266 102 F----TLPIRVLAFNKSGSMLAAAGD-------DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPN---SEYLASIDS-- 165 (945)
Q Consensus 102 ~----~~~V~~l~fspdg~~Lasgs~-------Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspd---g~~Las~s~-- 165 (945)
| ...|..-..+++.++++..+- .|.+.+|..+.+ ..+.+.+|......+.+.-+ ..+++.+..
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 4 345667777888898877652 367889998655 45667777555444433221 123333332
Q ss_pred -CCcEEEEEccCC---eeee---eecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCC
Q 002266 166 -IGTVIYWELQSG---RELH---NLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238 (945)
Q Consensus 166 -Dg~I~iwDl~t~---~~i~---~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~ 238 (945)
.+.+.|.++... .... ......+.. ....-.-++..++.-..+++-+.-|.|++||+.++.+++.-+- ...
T Consensus 225 ~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe-a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI-S~d 302 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGE 302 (365)
T ss_dssp TEEEEEEEECSSCCTTCCCCCCEEEEECCCTT-CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSS
T ss_pred CCcEEEEEEcCCCCCCCCCcccccceeeCCcc-ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc-CCC
Confidence 258888888442 1111 111111111 1223445688888777888889999999999999999887765 445
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeee
Q 002266 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDID 273 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~ 273 (945)
.|-.-+-+....-++.....|.|.-..++....+.
T Consensus 303 ~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 303 TIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 337 (365)
T ss_dssp CEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHH
T ss_pred ceEEecccCCCCcEEEEcCCCEEEEEEECcccEeh
Confidence 66555554444455556677877777776655443
No 305
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.32 E-value=0.094 Score=58.04 Aligned_cols=232 Identities=10% Similarity=0.043 Sum_probs=125.1
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe-eeeecc---cCCCCEEEEEEecC---CCEEEEEEC----C----Cc
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGE-FQTNIT---RFTLPIRVLAFNKS---GSMLAAAGD----D----EG 126 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~-~~~~l~---~~~~~V~~l~fspd---g~~Lasgs~----D----g~ 126 (945)
.....|+|.|+|+++++ ..+|.|++++ .++. .+..+. ........|+|+|+ +..|.++.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45689999999975554 6679999997 4554 222111 12346889999997 555555443 2 56
Q ss_pred EEEEEcCCC--e-----EE-EEEec-CCCCEEEEEEccCCCEEEEEeCC-------------CcEEEEEccCCeeeeeec
Q 002266 127 IKLINTIDG--S-----IA-RVLKG-HKGPVTGLAFDPNSEYLASIDSI-------------GTVIYWELQSGRELHNLK 184 (945)
Q Consensus 127 I~iwd~~~~--~-----~~-~~l~~-h~~~V~~lafspdg~~Las~s~D-------------g~I~iwDl~t~~~i~~~~ 184 (945)
|..|+.... . .+ ..+.. .......|+|.|+|.++++.+.. |.|.-++... +....-.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCCC
Confidence 777877543 1 11 11221 11234679999999866664321 3444444321 1000000
Q ss_pred c-cCCCCCCCCCCceEEEEcC-CCCEEEEEeCCC---eEEEEECCC--------C--------cEEEeecCCCCCCeEEE
Q 002266 185 R-VAPDIGSDPSSMNVLSWSP-DGETLAVPGLKN---DVVMYDRDT--------A--------EKLFSLRGDHVQPICFL 243 (945)
Q Consensus 185 ~-~~~~~~~~~~~i~~l~~sp-dg~~La~gs~dg---~I~vwD~~t--------~--------~~~~~~~~~h~~~I~~l 243 (945)
. ..............++|+| +|.++++-...+ .|.+..... + .++..+.. .......+
T Consensus 186 f~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~-~~~ap~G~ 264 (354)
T 3a9g_A 186 FPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGS-ETWAPSGA 264 (354)
T ss_dssp STTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT-CCCCEEEE
T ss_pred CCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCC-CCcCCcce
Confidence 0 0000000012245799999 666555432221 244433211 0 12223211 22457788
Q ss_pred EEc-------CCCCEEEEEECCCeEEEEECCCC-eeee--e-c-cCCCCeeEEEEecCCCEEEEEE
Q 002266 244 SWS-------PNGKYMATSSLDRQILIWDVGKK-LDID--R-Q-KFDDRICCMAWKPIGNALAVID 297 (945)
Q Consensus 244 ~fS-------pdg~~Lasgs~Dg~I~IWD~~~~-~~i~--~-~-~~~~~V~~la~spdg~~Las~s 297 (945)
+|. .+|.++++.-..+.|...++... .... . . .....+.++++.|+|.+.++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 883 57877777777788999988753 2321 1 1 1235789999999997555543
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.30 E-value=0.021 Score=63.17 Aligned_cols=232 Identities=14% Similarity=0.094 Sum_probs=120.9
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcc-ccc---cccccccceEEEEEecC---CCEEEEEEc-C-----Cc
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSN-LPK---ILRHHRDGVTALALSPN---STCLASGSI-D-----HS 84 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~-~~~---~l~~h~~~V~~la~spd---g~~Lasgs~-D-----g~ 84 (945)
..-..++|.|+|+.+++- ..+.|++++ .+.. ... ...........|+|+|+ +..|+++.. . +.
T Consensus 31 ~~P~~ia~~pdG~l~V~e--~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAE--RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEEEEE--TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEEEEe--CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 457789999999955553 569999998 2211 111 11122456889999998 555554433 2 57
Q ss_pred EEEEEcCCCee------eeecc---cCCCCEEEEEEecCCCEEEEEECC-------------CcEEEEEcCCC-------
Q 002266 85 VKLYKFPGGEF------QTNIT---RFTLPIRVLAFNKSGSMLAAAGDD-------------EGIKLINTIDG------- 135 (945)
Q Consensus 85 V~iwdl~~g~~------~~~l~---~~~~~V~~l~fspdg~~Lasgs~D-------------g~I~iwd~~~~------- 135 (945)
|..|+...+.. ...+. ........++|.|+|.+.++.++. |.|..++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 88888764421 11122 111234689999999766664322 45665655320
Q ss_pred ------eEEEEEecCCCCEEEEEEcc-CCCEEEEEeCCCcE------EEEEccCCeeee--------eecc-cCCCCC-C
Q 002266 136 ------SIARVLKGHKGPVTGLAFDP-NSEYLASIDSIGTV------IYWELQSGRELH--------NLKR-VAPDIG-S 192 (945)
Q Consensus 136 ------~~~~~l~~h~~~V~~lafsp-dg~~Las~s~Dg~I------~iwDl~t~~~i~--------~~~~-~~~~~~-~ 192 (945)
.......++ .....++|+| ++.++++-.....+ .|.-+..+.... .... ..+... .
T Consensus 187 ~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 187 LGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred cCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 111111233 2356789999 66655543322221 122222222000 0000 000000 0
Q ss_pred CCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE------EEeecCCCCCCeEEEEEcCCCCEEEEEE
Q 002266 193 DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEK------LFSLRGDHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 193 ~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~------~~~~~~~h~~~I~~l~fSpdg~~Lasgs 256 (945)
.......++| .+|..+++....+.|...++..... ...+.. ....+..+++.|+|.++++..
T Consensus 266 ~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-SSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc-cCCCeeEEEECCCCcEEEEEe
Confidence 1123455666 4666666655667788887764321 122222 235789999999997766654
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.26 E-value=0.00058 Score=83.23 Aligned_cols=211 Identities=11% Similarity=0.027 Sum_probs=122.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCC---ccccccccccccceEEEEEecCC-CEEEEEEcCCcEEEEEcCCC
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLP---SNLPKILRHHRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~---~~~~~~l~~h~~~V~~la~spdg-~~Lasgs~Dg~V~iwdl~~g 93 (945)
..+..|+|++.+..|+.+....+.|+.+++... ......+.........|++.+.+ .++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 345678899988888887656788999887641 12222222222345678888644 44444445688999998655
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEE-eCCCcEE
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASI-DSIGTVI 170 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~-s~Dg~I~ 170 (945)
.....+.........|++.|.+.+|+.+.. .+.|.++++........+...-.....|+|+|++..|+.+ ...+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 433333322344678899986665555442 2678887775332222222223456789999976655544 4567899
Q ss_pred EEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecC
Q 002266 171 YWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRG 234 (945)
Q Consensus 171 iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~ 234 (945)
++++.... ...+....... . ....+++..+ .++++....+.|..++..+++.+..+..
T Consensus 566 ~~d~dG~~-~~~~~~~~~~~-~---~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 566 SIDVNGGN-RKTILEDEKRL-A---HPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EECSSSSC-CEEECCCSSSC-S---SCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred EEccCCCc-eEEEEecCCcC-C---CceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 99986432 22222110011 1 1223455433 3444445568899999988887776643
No 308
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.24 E-value=0.0014 Score=79.93 Aligned_cols=229 Identities=11% Similarity=0.017 Sum_probs=129.5
Q ss_pred CCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEE-cCCcEEEEEcCC----CeeeeecccCCCCEEEEEEe
Q 002266 38 SETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGS-IDHSVKLYKFPG----GEFQTNITRFTLPIRVLAFN 112 (945)
Q Consensus 38 ~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs-~Dg~V~iwdl~~----g~~~~~l~~~~~~V~~l~fs 112 (945)
..+.|++.++.... ...++. ....+..|+|++.+..|+.+. ..+.|+.+++.. ......+.........|++.
T Consensus 384 ~~~~I~~id~~~~~-~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSE-YTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCC-EECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCc-ceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 34577777776542 222222 234567899998766666553 457899999865 22222222112234567887
Q ss_pred cCCCEE-EEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC--CCcEEEEEccCCeeeeeecccCCC
Q 002266 113 KSGSML-AAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS--IGTVIYWELQSGRELHNLKRVAPD 189 (945)
Q Consensus 113 pdg~~L-asgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~--Dg~I~iwDl~t~~~i~~~~~~~~~ 189 (945)
+.+..| ++-...+.|.++++........+.........|+++|.+.+|+.+.. .+.|.++++.... ...+..
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~---- 536 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVT---- 536 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESC----
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEe----
Confidence 544444 44445678999998655433333333345678999997666655543 2677777764322 111111
Q ss_pred CCCCCCCceEEEEcCCCCEEEE-EeCCCeEEEEECCCCcEEEeecC-CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q 002266 190 IGSDPSSMNVLSWSPDGETLAV-PGLKNDVVMYDRDTAEKLFSLRG-DHVQPICFLSWSPNGKYMATSSLDRQILIWDVG 267 (945)
Q Consensus 190 ~~~~~~~i~~l~~spdg~~La~-gs~dg~I~vwD~~t~~~~~~~~~-~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~ 267 (945)
......+.|+|+|++..|++ -+..+.|.++++........+.. ........|++..+ .++++....+.|..++..
T Consensus 537 --~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 537 --ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp --SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred --CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 01123456999997555544 44567899999875433322221 11123344555444 444555567889999988
Q ss_pred CCeeeeecc
Q 002266 268 KKLDIDRQK 276 (945)
Q Consensus 268 ~~~~i~~~~ 276 (945)
+++.+..+.
T Consensus 614 ~G~~~~~i~ 622 (699)
T 1n7d_A 614 TGSDVNLLA 622 (699)
T ss_dssp TEEEEECCC
T ss_pred CCCceEEee
Confidence 887766643
No 309
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.23 E-value=0.22 Score=55.81 Aligned_cols=241 Identities=13% Similarity=0.096 Sum_probs=147.5
Q ss_pred EEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC-Ceeeeeccc
Q 002266 23 ILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG-GEFQTNITR 101 (945)
Q Consensus 23 vafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~-g~~~~~l~~ 101 (945)
.-.+|..+.|+.-. ..++.|+|+++..... ...- ...|.--.|-.+. .|+..+ +..|+-|++.. ..+...+.+
T Consensus 71 AIMnP~~~iiALra--g~~lQiFnle~K~klk-s~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 71 AIMNPASKVIALKA--GKTLQIFNIEMKSKMK-AHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEECSSSSCEEEEE--TTEEEEEETTTTEEEE-EEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEEC
T ss_pred eeeCCCCcEEEEec--CCeEEEEchHHhhhhc-ceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheec
Confidence 34688888777764 6799999998764322 2222 3567777787654 455444 45799999964 244555555
Q ss_pred C----CCCEEEEEEecCCCEEEEEEC-------CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCC---CEEEEEeC--
Q 002266 102 F----TLPIRVLAFNKSGSMLAAAGD-------DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNS---EYLASIDS-- 165 (945)
Q Consensus 102 ~----~~~V~~l~fspdg~~Lasgs~-------Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg---~~Las~s~-- 165 (945)
| ...|..-..+++.++++..|- .|.+.+|..+.+ ..+.+.+|......+.+.-+. ..++.+..
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 4 345777777889999876542 367889998655 456677776655554443221 23444433
Q ss_pred -CCcEEEEEccCC---eee---eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCC
Q 002266 166 -IGTVIYWELQSG---REL---HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQ 238 (945)
Q Consensus 166 -Dg~I~iwDl~t~---~~i---~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~ 238 (945)
.+.+.|.++... ... .......+.. .......++..++.-..+++-+.-|.|++||+.++.+++.-.- ...
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe-~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI-s~~ 301 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGE 301 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCCCCEEEECCCCTT-STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSS
T ss_pred CCcEEEEEEcCCCccCCCCccceeeeeeCCcc-cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc-cCC
Confidence 268999888543 111 1111111111 1223445688888878888889999999999999999887654 334
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeee
Q 002266 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI 272 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i 272 (945)
.|..-+-.....-++.....|.|.-..++....+
T Consensus 302 ~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 302 TIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred ceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 5544444444334444445565555555544443
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.18 E-value=0.047 Score=60.44 Aligned_cols=241 Identities=13% Similarity=0.153 Sum_probs=124.1
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcc-cc----ccccccccceEEEEEecC---CCEEEEE-Ec-------
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSN-LP----KILRHHRDGVTALALSPN---STCLASG-SI------- 81 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~-~~----~~l~~h~~~V~~la~spd---g~~Lasg-s~------- 81 (945)
..-..|+|.|+|++|+++. ..|.|++++...... .. ............|+|+|+ +..|+.+ +.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e-~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITL-RGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEE-TTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEe-CCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 4468899999999333443 578999997432111 01 111122456789999995 4444443 22
Q ss_pred CCcEEEEEcCCC-----eeeeecccC------CCCEEEEEEecCCCEEEEEECC-------------CcEEEEEcCCCe-
Q 002266 82 DHSVKLYKFPGG-----EFQTNITRF------TLPIRVLAFNKSGSMLAAAGDD-------------EGIKLINTIDGS- 136 (945)
Q Consensus 82 Dg~V~iwdl~~g-----~~~~~l~~~------~~~V~~l~fspdg~~Lasgs~D-------------g~I~iwd~~~~~- 136 (945)
...|..|++..+ .....+... ......|+|.|+|.+.++.++. |.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666766533 111111111 1224579999999655554432 457777764320
Q ss_pred -----------EEEEE-ecCCCCEEEEEEcc-CCCEEEEEeCC--CcEEEEEccCCeee----ee---------ecc---
Q 002266 137 -----------IARVL-KGHKGPVTGLAFDP-NSEYLASIDSI--GTVIYWELQSGREL----HN---------LKR--- 185 (945)
Q Consensus 137 -----------~~~~l-~~h~~~V~~lafsp-dg~~Las~s~D--g~I~iwDl~t~~~i----~~---------~~~--- 185 (945)
....+ .++ .....++|+| +|. |.++... +.=.|.-+..+... .. +..
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 11112 233 3467899999 555 4443322 21222222222110 00 000
Q ss_pred -cCCCCC------CCCCCceEEEEcC-------CCCEEEEEeCCCeEEEEECCCCcEEEe--ecCCCCCCeEEEEEcCCC
Q 002266 186 -VAPDIG------SDPSSMNVLSWSP-------DGETLAVPGLKNDVVMYDRDTAEKLFS--LRGDHVQPICFLSWSPNG 249 (945)
Q Consensus 186 -~~~~~~------~~~~~i~~l~~sp-------dg~~La~gs~dg~I~vwD~~t~~~~~~--~~~~h~~~I~~l~fSpdg 249 (945)
...... .+......++|.. +|.++++....+.|..+++..++.... +.......+..+++.|+|
T Consensus 255 ~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp SSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 000000 0112345677753 466777666678888888876543322 221123578999999999
Q ss_pred CEEEEEE-CCCeE
Q 002266 250 KYMATSS-LDRQI 261 (945)
Q Consensus 250 ~~Lasgs-~Dg~I 261 (945)
.++++.. .+|.|
T Consensus 335 ~lyv~td~~~g~I 347 (353)
T 2g8s_A 335 YLYVLTDESSGEL 347 (353)
T ss_dssp CEEEEECSTTEEE
T ss_pred cEEEEEeCCCCEE
Confidence 8666543 34443
No 311
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.17 E-value=0.098 Score=56.53 Aligned_cols=237 Identities=11% Similarity=0.050 Sum_probs=138.4
Q ss_pred ECCCCCEEEEEEc-CCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcC--------------CcEEEEE
Q 002266 25 WDQQAHHLVTASS-SETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSID--------------HSVKLYK 89 (945)
Q Consensus 25 fspdg~~L~t~g~-~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~D--------------g~V~iwd 89 (945)
|+.+|..|+.+.. .++.|...+... .....+.. . .+--++++|.+|+.+... ..|+..+
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg--~~~~~l~~--~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDG--SNIHKLSN--D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTS--CSCEEEEE--E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCC--CCCEEccC--C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 4458888888753 355555555432 22333332 2 234558899998887653 3577777
Q ss_pred cCCCeeeeecccCCCCEEEEEEecCCCEEEEEE----CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeC
Q 002266 90 FPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAG----DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDS 165 (945)
Q Consensus 90 l~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs----~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~ 165 (945)
+..++.. .+... . ...|++++.+|+... ....|...++... ....+..+.. .+|+++++.|+..+.
T Consensus 95 ~dg~~~~-~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 95 RNGHGST-VLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp TTSCCCE-EEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECT
T ss_pred CCCCcce-EeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeC
Confidence 7665532 23222 2 236788899998876 2345666676543 3444544433 456788888886665
Q ss_pred -CCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC--CeEEEEECCCCcEEEeecCCCCCCeEE
Q 002266 166 -IGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK--NDVVMYDRDTAEKLFSLRGDHVQPICF 242 (945)
Q Consensus 166 -Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d--g~I~vwD~~t~~~~~~~~~~h~~~I~~ 242 (945)
...|.+.++..+.....+.. ... ..++|++.+|+..... ..|..-++...... .+.. ..+
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~~----------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~-~Lt~---~~~-- 227 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYDC----------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV-VLTE---ANI-- 227 (302)
T ss_dssp TTCCEEEEETTTTEEEEEECS----------CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCE-ECSC---SCE--
T ss_pred CCceEEEEECCCCCEEEEeCC----------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeE-EEeC---CCc--
Confidence 56788888766654322211 112 3456989988876543 46777787755533 3322 233
Q ss_pred EEEcCCCCEEEEEEC--CCeEEEEECCCCeeeeeccCCCCeeEEEEecCCCEEEEEEc
Q 002266 243 LSWSPNGKYMATSSL--DRQILIWDVGKKLDIDRQKFDDRICCMAWKPIGNALAVIDV 298 (945)
Q Consensus 243 l~fSpdg~~Lasgs~--Dg~I~IWD~~~~~~i~~~~~~~~V~~la~spdg~~Las~s~ 298 (945)
..|+|+|.+|+.++. .+.|..-+++.......... .+. .+++.+.+|+....
T Consensus 228 ~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~--~~~--~i~i~~d~Iy~td~ 281 (302)
T 3s25_A 228 EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG--EFC--NINVTSQYVYFTDF 281 (302)
T ss_dssp EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES--CEE--EEEECSSEEEEEET
T ss_pred ceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC--ccc--eEEEeCCEEEEEEC
Confidence 348888988876643 35677777765433222211 233 45667778877763
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.08 E-value=0.13 Score=56.73 Aligned_cols=236 Identities=11% Similarity=0.112 Sum_probs=123.8
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecc-------cCCCCEEEEEEecC---CCEEEEEE-C-------
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNIT-------RFTLPIRVLAFNKS---GSMLAAAG-D------- 123 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~-------~~~~~V~~l~fspd---g~~Lasgs-~------- 123 (945)
...+.|+|.|+|++|+++...|.|++++. .+.....+. ........|+|+|+ +..|.++. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 45689999999983444567899999984 444321111 12345789999995 45555443 2
Q ss_pred CCcEEEEEcCCC--e--EEE-EEec------CCCCEEEEEEccCCCEEEEEeCC-------------CcEEEEEccCCee
Q 002266 124 DEGIKLINTIDG--S--IAR-VLKG------HKGPVTGLAFDPNSEYLASIDSI-------------GTVIYWELQSGRE 179 (945)
Q Consensus 124 Dg~I~iwd~~~~--~--~~~-~l~~------h~~~V~~lafspdg~~Las~s~D-------------g~I~iwDl~t~~~ 179 (945)
...|..|++... . ... .+.. .......|+|.|+|.++++.+.. |.|.-++.... .
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~-~ 175 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE-I 175 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC-C
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC-C
Confidence 235666666432 1 111 1211 11123579999999655554332 34555554321 0
Q ss_pred eee--ecc---cCCC-CCCCCCCceEEEEcC-CCCEEEEEeCCC----eEEEEECC--------CC--------------
Q 002266 180 LHN--LKR---VAPD-IGSDPSSMNVLSWSP-DGETLAVPGLKN----DVVMYDRD--------TA-------------- 226 (945)
Q Consensus 180 i~~--~~~---~~~~-~~~~~~~i~~l~~sp-dg~~La~gs~dg----~I~vwD~~--------t~-------------- 226 (945)
... +.. .... ..........++|+| +|.++++ .... .|.+.... .+
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~-d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN-EHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE-EECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE-ecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 000 000 0000 000112356799999 5554443 2221 22221110 00
Q ss_pred -------cEEEeecCCCCCCeEEEEEcC-------CCCEEEEEECCCeEEEEECCCCeeeeec----cCCCCeeEEEEec
Q 002266 227 -------EKLFSLRGDHVQPICFLSWSP-------NGKYMATSSLDRQILIWDVGKKLDIDRQ----KFDDRICCMAWKP 288 (945)
Q Consensus 227 -------~~~~~~~~~h~~~I~~l~fSp-------dg~~Lasgs~Dg~I~IWD~~~~~~i~~~----~~~~~V~~la~sp 288 (945)
.++..+. +...+..+.|.. +|.++++.-..+.|...++..+..+... .....+..+++.|
T Consensus 255 ~~~~~~~~P~~~~~--~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK--DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp SSCTTSCCCSEEES--SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCccCCeEEeC--CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 0111111 223566777763 5777777777788888888765544321 2245799999999
Q ss_pred CCCEEEEEE-cCCeE
Q 002266 289 IGNALAVID-VMGKY 302 (945)
Q Consensus 289 dg~~Las~s-~DG~I 302 (945)
+|.++++.. .+|.|
T Consensus 333 dG~lyv~td~~~g~I 347 (353)
T 2g8s_A 333 DGYLYVLTDESSGEL 347 (353)
T ss_dssp TSCEEEEECSTTEEE
T ss_pred CCcEEEEEeCCCCEE
Confidence 998555433 34543
No 313
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.02 E-value=0.17 Score=60.61 Aligned_cols=205 Identities=12% Similarity=0.006 Sum_probs=130.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEE-EcCCcEEEEEcCCCeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASG-SIDHSVKLYKFPGGEFQ 96 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasg-s~Dg~V~iwdl~~g~~~ 96 (945)
..+..|+|++.+..|+.+...++.|..+++... .....+.........|++.+.+..|+.+ ...+.|.+.++......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~-~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGS-ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCC-CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence 468899999988888888767889999887543 2222333223456789998765555444 45688999998654322
Q ss_pred eecccCCCCEEEEEEecCCCEEEEEEC--CCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEE
Q 002266 97 TNITRFTLPIRVLAFNKSGSMLAAAGD--DEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYWE 173 (945)
Q Consensus 97 ~~l~~~~~~V~~l~fspdg~~Lasgs~--Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwD 173 (945)
..+...-.....|++.|....|..+.. .+.|...++..... ..+...-.....|++++++..|+.+. ..+.|..+|
T Consensus 116 ~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d 194 (628)
T 4a0p_A 116 VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSN 194 (628)
T ss_dssp EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEc
Confidence 223233446789999996666666653 46788888754433 33333456788999999877766664 456899999
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeec
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLR 233 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~ 233 (945)
+..... ..+.. .......+++.. +..+++-...+.|...|..+++....+.
T Consensus 195 ~dG~~~-~v~~~-------~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 195 MLGLNR-EVIAD-------DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp TTSCSC-EEEEE-------CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCce-EEeec-------cCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 865433 22221 112234566654 4444444457889999987776544443
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.01 E-value=0.034 Score=59.50 Aligned_cols=229 Identities=13% Similarity=0.071 Sum_probs=116.2
Q ss_pred CCCEEEEEE-cC----CCeEEEEcCCCCccc-cccccccccceEEEEEecCCCEEEEEEcC-----CcEEEEEcCCCe--
Q 002266 28 QAHHLVTAS-SS----ETTISIHDPLLPSNL-PKILRHHRDGVTALALSPNSTCLASGSID-----HSVKLYKFPGGE-- 94 (945)
Q Consensus 28 dg~~L~t~g-~~----dg~V~IWd~~~~~~~-~~~l~~h~~~V~~la~spdg~~Lasgs~D-----g~V~iwdl~~g~-- 94 (945)
++..++.+| .. -..+.+||..+..-. ...+........++ ..++.+++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 444555554 22 246788887654311 11111111111222 2356777777754 468999987654
Q ss_pred -ee--eecccCCCCEEEEEEecCCCEEEEEECCC-----cEEEEEcCCCeEEEE--EecCCCCEEEEEEccCCCEEEEEe
Q 002266 95 -FQ--TNITRFTLPIRVLAFNKSGSMLAAAGDDE-----GIKLINTIDGSIARV--LKGHKGPVTGLAFDPNSEYLASID 164 (945)
Q Consensus 95 -~~--~~l~~~~~~V~~l~fspdg~~Lasgs~Dg-----~I~iwd~~~~~~~~~--l~~h~~~V~~lafspdg~~Las~s 164 (945)
-. ..+.........+. .++.+++.|+.++ .+.+||+.+.+-... +.........+.+ ++++++.|+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred eeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 22 11211111122222 2677777776543 588999887653332 2211112222222 677777776
Q ss_pred CC-----CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcE--EEee
Q 002266 165 SI-----GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-----NDVVMYDRDTAEK--LFSL 232 (945)
Q Consensus 165 ~D-----g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d-----g~I~vwD~~t~~~--~~~~ 232 (945)
.+ ..+.+||+.+.+-... ... +. .......+.+ +++.+++|+.+ ..+.+||+.+.+- +..+
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~-~~~-p~---~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNV-TPM-AT---KRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEE-CCC-SS---CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred CCCCcccceEEEEeCCCCcEEeC-CCC-Cc---ccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 54 3588999887754322 111 11 1111122222 67777777764 4699999986543 2222
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeee
Q 002266 233 RGDHVQPICFLSWSPNGKYMATSSLD-----RQILIWDVGKKLDI 272 (945)
Q Consensus 233 ~~~h~~~I~~l~fSpdg~~Lasgs~D-----g~I~IWD~~~~~~i 272 (945)
.. .......+.+ ++++++.|+.+ ..|.+||+.+.+-.
T Consensus 241 p~-~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 241 TT-PRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp SS-CCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred CC-cccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 21 1111222222 67777777655 35788888776543
No 315
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.92 E-value=0.32 Score=53.42 Aligned_cols=235 Identities=17% Similarity=0.138 Sum_probs=124.4
Q ss_pred CCCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccc-----cccccccccceEEEEEecC---CCEEEEE-E--cCCcE
Q 002266 17 AASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNL-----PKILRHHRDGVTALALSPN---STCLASG-S--IDHSV 85 (945)
Q Consensus 17 ~~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~-----~~~l~~h~~~V~~la~spd---g~~Lasg-s--~Dg~V 85 (945)
...-+.|+|.|+|+.+++-- ..|.|++++...+... .............|+++|+ +.+|+.. + .++.|
T Consensus 31 L~~P~~ia~~pdG~llVter-~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSR-DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSCEEEEET-TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCcEEEEEe-cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 45678999999999776652 4899999975443211 1122234567899999995 3444432 2 34566
Q ss_pred EEEEcCCCe--------eeee---cc-cCCCCEEEEEEecCCCEEEEEEC-------------CCcEEEEEcCCC-----
Q 002266 86 KLYKFPGGE--------FQTN---IT-RFTLPIRVLAFNKSGSMLAAAGD-------------DEGIKLINTIDG----- 135 (945)
Q Consensus 86 ~iwdl~~g~--------~~~~---l~-~~~~~V~~l~fspdg~~Lasgs~-------------Dg~I~iwd~~~~----- 135 (945)
.-|.+..+. .... +. ........|.|.|+|.+.++.++ .|.|.-++....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 667665421 1111 11 11223467999999987777543 355655555322
Q ss_pred ---eEEEEEecCCCCEEEEEEccCCCEEEEE-eCCCcEEEEEccCCeeeeeecc---------c-CCCC--CCCCCCceE
Q 002266 136 ---SIARVLKGHKGPVTGLAFDPNSEYLASI-DSIGTVIYWELQSGRELHNLKR---------V-APDI--GSDPSSMNV 199 (945)
Q Consensus 136 ---~~~~~l~~h~~~V~~lafspdg~~Las~-s~Dg~I~iwDl~t~~~i~~~~~---------~-~~~~--~~~~~~i~~ 199 (945)
.....-.+|.. ...++|+|+|.++++- +.++.-.|.-+..+... -+.. . .+.. ..+......
T Consensus 190 Pf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny-GwP~~~g~~~~~~~~~P~~~~~~~~~ap~G 267 (347)
T 3das_A 190 PFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY-GWPEAEGKGGGSGFHDPVAQWSTDEASPSG 267 (347)
T ss_dssp SSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC-CTTTCCSSCCCTTCCCCSEEECTTTCCEEE
T ss_pred CCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEe-cCCcccCCCCCccccCCcEecCCCCCCCcc
Confidence 11111234543 4679999987755543 22332333333332210 0000 0 0000 000013345
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEeecCCCCCCeEEEEEcCCCCEEEEEE
Q 002266 200 LSWSPDGETLAVPGLKNDVVMYDRDTAEK----LFSLRGDHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 200 l~~spdg~~La~gs~dg~I~vwD~~t~~~----~~~~~~~h~~~I~~l~fSpdg~~Lasgs 256 (945)
++|. +|..+...-..+.|..+.+..... ...+.+ ....+..|+..|||.++++..
T Consensus 268 ~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~-~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 268 IAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEG-EYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTT-TSSCEEEEEEEETTEEEEEEC
T ss_pred eEEE-cCceeeccccCCEEEEEEecCCceecceEEeecC-CCCCccEEEECCCCcEEEEEc
Confidence 6665 355555555566777776654432 222332 446789999999987666544
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.89 E-value=0.074 Score=56.80 Aligned_cols=224 Identities=11% Similarity=0.093 Sum_probs=114.4
Q ss_pred CCCEEEEEE-cC-----CcEEEEEcCCCeeeeecccCCCC-EEEEEEecCCCEEEEEECC-----CcEEEEEcCCCe---
Q 002266 72 NSTCLASGS-ID-----HSVKLYKFPGGEFQTNITRFTLP-IRVLAFNKSGSMLAAAGDD-----EGIKLINTIDGS--- 136 (945)
Q Consensus 72 dg~~Lasgs-~D-----g~V~iwdl~~g~~~~~l~~~~~~-V~~l~fspdg~~Lasgs~D-----g~I~iwd~~~~~--- 136 (945)
++.+++.|+ .+ ..+.+||..+.+-.. +.....+ ....+...++.+++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF-LPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe-CCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 344555555 22 468888887765322 2211111 1111222366777777755 358999988765
Q ss_pred EEEE--EecCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE
Q 002266 137 IARV--LKGHKGPVTGLAFDPNSEYLASIDSI-----GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL 209 (945)
Q Consensus 137 ~~~~--l~~h~~~V~~lafspdg~~Las~s~D-----g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L 209 (945)
-... +.........+.+ ++.+++.|+.+ ..+.+||+.+.+-...-. . +.. ......+.+ +++.+
T Consensus 93 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~-p~~---r~~~~~~~~--~~~iy 163 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD-M-QTA---REGAGLVVA--SGVIY 163 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE-C-SSC---CBSCEEEEE--TTEEE
T ss_pred eEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCC-C-CCC---cccceEEEE--CCEEE
Confidence 3222 1111122222222 56677777644 358899988765332211 1 110 111122222 67777
Q ss_pred EEEeCC-----CeEEEEECCCCcEEE--eecCCCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeeeeeccC
Q 002266 210 AVPGLK-----NDVVMYDRDTAEKLF--SLRGDHVQPICFLSWSPNGKYMATSSLD-----RQILIWDVGKKLDIDRQKF 277 (945)
Q Consensus 210 a~gs~d-----g~I~vwD~~t~~~~~--~~~~~h~~~I~~l~fSpdg~~Lasgs~D-----g~I~IWD~~~~~~i~~~~~ 277 (945)
+.|+.+ ..+.+||+.+.+-.. .+.. .......+.+ ++++++.|+.+ ..+.+||+.+..-......
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMAT-KRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCc-ccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 777654 468999987654322 2221 1111222222 67777777754 4689999988765544222
Q ss_pred C--CCeeEEEEecCCCEEEEEEcCC-----eEEEEecCC
Q 002266 278 D--DRICCMAWKPIGNALAVIDVMG-----KYGVWESVV 309 (945)
Q Consensus 278 ~--~~V~~la~spdg~~Las~s~DG-----~I~iWd~~~ 309 (945)
. ..-.+++ .-+++.++.|+.++ .+.+||+..
T Consensus 241 p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 241 TTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 1 1111222 22566666666553 456666654
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.85 E-value=0.049 Score=60.27 Aligned_cols=197 Identities=11% Similarity=0.103 Sum_probs=111.4
Q ss_pred EEEEEECCCCCEEEEEE-----------cCCCeEEEEcCCCCcccccc--ccc-----cccceEEEEEec--CCC-EEEE
Q 002266 20 FCSILWDQQAHHLVTAS-----------SSETTISIHDPLLPSNLPKI--LRH-----HRDGVTALALSP--NST-CLAS 78 (945)
Q Consensus 20 V~svafspdg~~L~t~g-----------~~dg~V~IWd~~~~~~~~~~--l~~-----h~~~V~~la~sp--dg~-~Las 78 (945)
.-.+...|+|..+++++ ..+|.|.++|..+....... +.+ ..-....|.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34566788876554441 25899999998743211111 111 223567777766 454 4544
Q ss_pred EE-c--CCcEEEEEcCCC-ee---eeecccC-CCCEEEEEEecCCCEEEEEE-----------------CCCcEEEEEcC
Q 002266 79 GS-I--DHSVKLYKFPGG-EF---QTNITRF-TLPIRVLAFNKSGSMLAAAG-----------------DDEGIKLINTI 133 (945)
Q Consensus 79 gs-~--Dg~V~iwdl~~g-~~---~~~l~~~-~~~V~~l~fspdg~~Lasgs-----------------~Dg~I~iwd~~ 133 (945)
+. . +.+|.+|++..+ .. ...+... -....++.+.++|.+.++.. ..|.|..++.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 43 2 467888877543 21 2222221 23578999999998776653 1234555554
Q ss_pred CCeEEEEEecCCCCEEEEEEccCCCEEEEEe-CCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcC-CCCEEEE
Q 002266 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASID-SIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSP-DGETLAV 211 (945)
Q Consensus 134 ~~~~~~~l~~h~~~V~~lafspdg~~Las~s-~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~sp-dg~~La~ 211 (945)
++.. .+...-...+.|+|+||+++|+.+. ..+.|..|++.....+...... .. ......+++.+ +|++.++
T Consensus 211 -~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~---~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 211 -NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SF---DTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp -TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--EC---SSEEEEEEECTTTCCEEEE
T ss_pred -CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eC---CCCCceEEEeCCCCcEEEE
Confidence 3322 2333335679999999998877664 5678999998642212111111 01 24456789998 5987775
Q ss_pred EeCC-CeEEEEECC
Q 002266 212 PGLK-NDVVMYDRD 224 (945)
Q Consensus 212 gs~d-g~I~vwD~~ 224 (945)
+..+ +.|..|+..
T Consensus 284 ~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 284 CHPNGMRIFFYDAE 297 (355)
T ss_dssp EESCHHHHHSCCTT
T ss_pred ecCCceEEEEECCC
Confidence 5433 345555543
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.80 E-value=0.14 Score=54.89 Aligned_cols=218 Identities=10% Similarity=0.039 Sum_probs=112.2
Q ss_pred CCeEEEEcCCCCccc-cccccccccceEEEEEecCCCEEEEEEcC----CcEEEEEcCCCeeeee--cccCCCCEEEEEE
Q 002266 39 ETTISIHDPLLPSNL-PKILRHHRDGVTALALSPNSTCLASGSID----HSVKLYKFPGGEFQTN--ITRFTLPIRVLAF 111 (945)
Q Consensus 39 dg~V~IWd~~~~~~~-~~~l~~h~~~V~~la~spdg~~Lasgs~D----g~V~iwdl~~g~~~~~--l~~~~~~V~~l~f 111 (945)
...+.+||..+..-. ...+........++. -++.+++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 99 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA- 99 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE-
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE-
Confidence 457888987765311 111111111112222 356677777754 6788999887653322 111111122222
Q ss_pred ecCCCEEEEEECC------CcEEEEEcCCCeEEEEE--ecCCCCEEEEEEccCCCEEEEEeC---------CCcEEEEEc
Q 002266 112 NKSGSMLAAAGDD------EGIKLINTIDGSIARVL--KGHKGPVTGLAFDPNSEYLASIDS---------IGTVIYWEL 174 (945)
Q Consensus 112 spdg~~Lasgs~D------g~I~iwd~~~~~~~~~l--~~h~~~V~~lafspdg~~Las~s~---------Dg~I~iwDl 174 (945)
-++.+++.|+.+ ..+.+||+.+.+-...- .........+.+ ++++++.|+. -..+.+||+
T Consensus 100 -~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 100 -AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp -ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred -ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCC
Confidence 267777887765 45889999877543321 111111122222 5666666653 345889999
Q ss_pred cCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCc--EEEeecCCCCCCeEEEEEcC
Q 002266 175 QSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-----NDVVMYDRDTAE--KLFSLRGDHVQPICFLSWSP 247 (945)
Q Consensus 175 ~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d-----g~I~vwD~~t~~--~~~~~~~~h~~~I~~l~fSp 247 (945)
.+.+-... ... +. .......+.+ +++.+++|+.+ ..+.+||+.+.+ .+..+.. .......+.+
T Consensus 177 ~~~~W~~~-~~~-p~---~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~-- 246 (306)
T 3ii7_A 177 ATETWTEL-CPM-IE---ARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW-KGVTVKCAAV-- 246 (306)
T ss_dssp TTTEEEEE-CCC-SS---CCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC-CBSCCEEEEE--
T ss_pred CCCeEEEC-CCc-cc---hhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC-CccceeEEEE--
Confidence 87753322 111 11 0111122222 67777777653 468999988754 2222221 1122223333
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCeee
Q 002266 248 NGKYMATSSLD-----RQILIWDVGKKLDI 272 (945)
Q Consensus 248 dg~~Lasgs~D-----g~I~IWD~~~~~~i 272 (945)
++++++.|+.+ ..+.+||+.+.+-.
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 67777888754 46888888776443
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.80 E-value=0.071 Score=57.04 Aligned_cols=187 Identities=14% Similarity=0.089 Sum_probs=98.4
Q ss_pred CCCEEEEEEcC-----CcEEEEEcCCCeeeee--cccCCCCEEEEEEecCCCEEEEEECCC-----cEEEEEcCCCeEEE
Q 002266 72 NSTCLASGSID-----HSVKLYKFPGGEFQTN--ITRFTLPIRVLAFNKSGSMLAAAGDDE-----GIKLINTIDGSIAR 139 (945)
Q Consensus 72 dg~~Lasgs~D-----g~V~iwdl~~g~~~~~--l~~~~~~V~~l~fspdg~~Lasgs~Dg-----~I~iwd~~~~~~~~ 139 (945)
++.+++.|+.+ ..+.+||..+.+-... +.........+. -++..++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56677777754 3588999877653222 111111112222 2677888887654 47788987765433
Q ss_pred E--EecCCCCEEEEEEccCCCEEEEEeCC-------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEE
Q 002266 140 V--LKGHKGPVTGLAFDPNSEYLASIDSI-------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLA 210 (945)
Q Consensus 140 ~--l~~h~~~V~~lafspdg~~Las~s~D-------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La 210 (945)
. +.........+.+ ++++++.|+.+ ..+.+||+.+.+-... ... +. .......+.+ +++.++
T Consensus 139 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~-p~---~r~~~~~~~~--~~~iyv 209 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI-AEM-ST---RRSGAGVGVL--NNLLYA 209 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE-CCC-SS---CCBSCEEEEE--TTEEEE
T ss_pred cCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC-CCC-cc---ccccccEEEE--CCEEEE
Confidence 2 1111111222222 56666666543 3588999887653322 111 11 0111122222 677788
Q ss_pred EEeCC-----CeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECCC-----eEEEEECCCCeee
Q 002266 211 VPGLK-----NDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLDR-----QILIWDVGKKLDI 272 (945)
Q Consensus 211 ~gs~d-----g~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg-----~I~IWD~~~~~~i 272 (945)
+|+.+ ..+.+||..+.+- +..+.. .......+. -++++++.|+.++ .+.+||+.+.+-.
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTTNAWRQVADMNM-CRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ECCCCCCcccceEEEEeCCCCCEeeCCCCCC-ccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 87764 4699999886542 222221 111112222 2677777777553 4788888776543
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.65 E-value=0.19 Score=53.69 Aligned_cols=223 Identities=15% Similarity=0.148 Sum_probs=113.1
Q ss_pred CEEEEEEcC----CcEEEEEcCCCeeeee--cccCCCCEEEEEEecCCCEEEEEECCC-----cEEEEEcCCCeEEEEE-
Q 002266 74 TCLASGSID----HSVKLYKFPGGEFQTN--ITRFTLPIRVLAFNKSGSMLAAAGDDE-----GIKLINTIDGSIARVL- 141 (945)
Q Consensus 74 ~~Lasgs~D----g~V~iwdl~~g~~~~~--l~~~~~~V~~l~fspdg~~Lasgs~Dg-----~I~iwd~~~~~~~~~l- 141 (945)
.+++.|+.+ ..+.+||+.+.+-... +......-..+. -++.+++.|+.++ .+.+||+.+.+-...-
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 344555432 3577888776653221 111111111222 2667777777543 5889998876533221
Q ss_pred -ecCCCCEEEEEEccCCCEEEEEeCCC-----cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC
Q 002266 142 -KGHKGPVTGLAFDPNSEYLASIDSIG-----TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK 215 (945)
Q Consensus 142 -~~h~~~V~~lafspdg~~Las~s~Dg-----~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d 215 (945)
.........+.+ ++.+++.|+.++ .+.+||+.+.+-... ... +. .......+.+ +++.++.|+.+
T Consensus 95 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~-p~---~r~~~~~~~~--~~~iyv~GG~~ 165 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV-APM-NT---RRSSVGVGVV--GGLLYAVGGYD 165 (302)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-CCC-SS---CCBSCEEEEE--TTEEEEECCEE
T ss_pred CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeec-CCC-CC---cccCceEEEE--CCEEEEEeCCC
Confidence 111112222222 567777777553 577888877653322 111 11 1111122222 66777777642
Q ss_pred -------CeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeeeeeccCC--C
Q 002266 216 -------NDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLD-----RQILIWDVGKKLDIDRQKFD--D 279 (945)
Q Consensus 216 -------g~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D-----g~I~IWD~~~~~~i~~~~~~--~ 279 (945)
..+.+||..+.+- +..+.. .......+.+ ++++++.|+.+ ..+.+||+.+..-....... .
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r 242 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEMST-RRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR 242 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCCCccccEEEEEeCCCCcEEECCCCcc-ccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc
Confidence 4589999886543 222222 1111222222 67777777754 36899999887655442221 1
Q ss_pred CeeEEEEecCCCEEEEEEcCC-----eEEEEecCCCC
Q 002266 280 RICCMAWKPIGNALAVIDVMG-----KYGVWESVVPS 311 (945)
Q Consensus 280 ~V~~la~spdg~~Las~s~DG-----~I~iWd~~~~~ 311 (945)
.-.+++ ..+++.++.|+.++ .+.+||+....
T Consensus 243 ~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 243 RNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ccCeEE-EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 111222 23566666666553 36777765543
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.65 E-value=0.14 Score=55.08 Aligned_cols=226 Identities=11% Similarity=0.070 Sum_probs=112.9
Q ss_pred EEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEc----C-------CcEEEEEcCCCeeeeec
Q 002266 31 HLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI----D-------HSVKLYKFPGGEFQTNI 99 (945)
Q Consensus 31 ~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~----D-------g~V~iwdl~~g~~~~~l 99 (945)
.|+..|+ ..+.+||..+..-....+..........+...++.+++.|+. + ..+.+||..+.+-. .+
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~ 82 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GM 82 (315)
T ss_dssp EEEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-EC
T ss_pred EEEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-EC
Confidence 3444442 578999987764211111111122223333457788888874 1 12778888776532 22
Q ss_pred ccCCCCEE--EEEEecCCCEEEEEECC--------CcEEEEEcCCCeEEEE--EecCCCCEEEEEEccCCCEEEEEeC-C
Q 002266 100 TRFTLPIR--VLAFNKSGSMLAAAGDD--------EGIKLINTIDGSIARV--LKGHKGPVTGLAFDPNSEYLASIDS-I 166 (945)
Q Consensus 100 ~~~~~~V~--~l~fspdg~~Lasgs~D--------g~I~iwd~~~~~~~~~--l~~h~~~V~~lafspdg~~Las~s~-D 166 (945)
.....+-. +++. -++..++.|+.+ ..+.+||+.+.+-... +.........+. -++++++.|+. +
T Consensus 83 ~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 159 (315)
T 4asc_A 83 PPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGS 159 (315)
T ss_dssp CCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCT
T ss_pred CCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCC
Confidence 22111111 1122 266777777632 3588999987653221 111111112222 35667777765 2
Q ss_pred -----CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcE--EEeecC
Q 002266 167 -----GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN-----DVVMYDRDTAEK--LFSLRG 234 (945)
Q Consensus 167 -----g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg-----~I~vwD~~t~~~--~~~~~~ 234 (945)
..+.+||+.+.+-... ... +. .......+.+ +++.+++|+.++ .+.+||+.+.+- +..+..
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~-~~~-p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 232 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKEL-APM-QT---ARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ 232 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEEC-CCC-SS---CCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS
T ss_pred CCcccceEEEEeCCCCeEEEC-CCC-CC---chhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC
Confidence 3689999887643221 111 11 1111122222 677788887654 588999876542 222221
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCC--------------eEEEEECCCCeee
Q 002266 235 DHVQPICFLSWSPNGKYMATSSLDR--------------QILIWDVGKKLDI 272 (945)
Q Consensus 235 ~h~~~I~~l~fSpdg~~Lasgs~Dg--------------~I~IWD~~~~~~i 272 (945)
.......+.+ ++++++.|+.++ .|.+||+.+.+-.
T Consensus 233 -~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 233 -ERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp -CCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred -cccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 1111222222 667777776532 3667777765443
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.63 E-value=0.24 Score=52.94 Aligned_cols=223 Identities=10% Similarity=-0.002 Sum_probs=115.8
Q ss_pred CEEEEEEc--CCcEEEEEcCCCeeeee--cccCCCCEEEEEEecCCCEEEEEECC----CcEEEEEcCCCeEEEEEe--c
Q 002266 74 TCLASGSI--DHSVKLYKFPGGEFQTN--ITRFTLPIRVLAFNKSGSMLAAAGDD----EGIKLINTIDGSIARVLK--G 143 (945)
Q Consensus 74 ~~Lasgs~--Dg~V~iwdl~~g~~~~~--l~~~~~~V~~l~fspdg~~Lasgs~D----g~I~iwd~~~~~~~~~l~--~ 143 (945)
.+++.|+. ...+.+||..+.+-... +.........+. -++.+++.|+.+ ..+.+||+.+.+-...-. .
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555554 35788999887653321 111111112222 366777787755 568899998875433221 1
Q ss_pred CCCCEEEEEEccCCCEEEEEeCC------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC---
Q 002266 144 HKGPVTGLAFDPNSEYLASIDSI------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL--- 214 (945)
Q Consensus 144 h~~~V~~lafspdg~~Las~s~D------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~--- 214 (945)
.......+.+ ++.+++.|+.+ ..+.+||+.+.+-... ... +.. ......+. -+++.++.|+.
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~-~~~-p~~---r~~~~~~~--~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK-PSM-LTQ---RCSHGMVE--ANGLIYVCGGSLGN 161 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE-CCC-SSC---CBSCEEEE--ETTEEEEECCEESC
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC-CCC-cCC---cceeEEEE--ECCEEEEECCCCCC
Confidence 1112222222 56777777765 3588999887753322 111 110 11112222 26677777764
Q ss_pred ------CCeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeeeeeccCCCC-
Q 002266 215 ------KNDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLD-----RQILIWDVGKKLDIDRQKFDDR- 280 (945)
Q Consensus 215 ------dg~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D-----g~I~IWD~~~~~~i~~~~~~~~- 280 (945)
-..+.+||..+.+- +..+.. ....-..+.+ ++++++.|+.+ ..+.+||+.+..-.........
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPMIE-ARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CCcccccceEEEeCCCCCeEEECCCccc-hhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc
Confidence 34588999887643 222221 1111122222 66777776643 4689999988755444222111
Q ss_pred -eeEEEEecCCCEEEEEEcC-----CeEEEEecCCCC
Q 002266 281 -ICCMAWKPIGNALAVIDVM-----GKYGVWESVVPS 311 (945)
Q Consensus 281 -V~~la~spdg~~Las~s~D-----G~I~iWd~~~~~ 311 (945)
-.+++.. ++..++.|+.+ ..+.+||+....
T Consensus 239 ~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 239 VTVKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp SCCEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred cceeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 1122222 56677777644 457777776544
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.61 E-value=0.28 Score=54.18 Aligned_cols=188 Identities=16% Similarity=0.149 Sum_probs=110.0
Q ss_pred CEEEEEEecCCCEEEEE------------ECCCcEEEEEcCC--CeE-EEEEec-----CCCCEEEEEEcc--CCC-EEE
Q 002266 105 PIRVLAFNKSGSMLAAA------------GDDEGIKLINTID--GSI-ARVLKG-----HKGPVTGLAFDP--NSE-YLA 161 (945)
Q Consensus 105 ~V~~l~fspdg~~Lasg------------s~Dg~I~iwd~~~--~~~-~~~l~~-----h~~~V~~lafsp--dg~-~La 161 (945)
...++.+.++|..++++ ..+|.|.++|+.+ ++. ...+.+ .......|.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34556666765444443 2688999999874 222 112222 234678888866 454 444
Q ss_pred EE-eC--CCcEEEEEccCCee-eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEe-----------------CCCeEEE
Q 002266 162 SI-DS--IGTVIYWELQSGRE-LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPG-----------------LKNDVVM 220 (945)
Q Consensus 162 s~-s~--Dg~I~iwDl~t~~~-i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs-----------------~dg~I~v 220 (945)
++ .. +.+|.+|++..... ...+..... ......+.+.+.++|.+.++.. ..|.|+.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g---~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH---KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECC---TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEecccc---CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 44 33 46788888765422 221211111 1234568899999998776643 1255666
Q ss_pred EECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCC-Ceeee--eccCCCCeeEEEEec-CCCEEEE
Q 002266 221 YDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSS-LDRQILIWDVGK-KLDID--RQKFDDRICCMAWKP-IGNALAV 295 (945)
Q Consensus 221 wD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs-~Dg~I~IWD~~~-~~~i~--~~~~~~~V~~la~sp-dg~~Las 295 (945)
||....+ .+.. .-...+.++|||||++|+.+. ..+.|+.|++.. +.... .+......-.+++.+ +|++.++
T Consensus 208 ~d~~~~~---~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 208 YSPNDVR---VVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp ECTTCCE---EEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEE
T ss_pred EECCeEE---Eeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEE
Confidence 6664222 1211 234578899999998877665 578999999863 33221 233355677888888 5887776
Q ss_pred EEcC
Q 002266 296 IDVM 299 (945)
Q Consensus 296 ~s~D 299 (945)
+..+
T Consensus 284 ~~~~ 287 (355)
T 3sre_A 284 CHPN 287 (355)
T ss_dssp EESC
T ss_pred ecCC
Confidence 6544
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.49 E-value=0.13 Score=57.48 Aligned_cols=141 Identities=15% Similarity=0.188 Sum_probs=88.1
Q ss_pred EEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecC----CCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCee------
Q 002266 110 AFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGH----KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRE------ 179 (945)
Q Consensus 110 ~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h----~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~------ 179 (945)
....+|..++++- ++.||.-++......+.+... -..|..+..+|+|++||..+. ..|.|..+..+..
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence 3445666666654 467887787755444555433 236888999999999998864 6899988873321
Q ss_pred ------eeeecccCCCCCCCCCCceEEEEcC---CCCEEEEEeCCCeEEEEECCCCc--EEEeecC--------CCCCCe
Q 002266 180 ------LHNLKRVAPDIGSDPSSMNVLSWSP---DGETLAVPGLKNDVVMYDRDTAE--KLFSLRG--------DHVQPI 240 (945)
Q Consensus 180 ------i~~~~~~~~~~~~~~~~i~~l~~sp---dg~~La~gs~dg~I~vwD~~t~~--~~~~~~~--------~h~~~I 240 (945)
.+.+... +.......+|..+.||| .|..|++-..|+.|++||+.... +. .+.. .....|
T Consensus 105 ~~~~~q~~ty~l~-~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 105 IQDAFQIFHYSID-EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHTTEEEEEEGG-GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred cccccceeEEEcC-CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 1112111 11112357799999999 45789999999999999998522 22 2221 122467
Q ss_pred EEEEEcCCCCEEEE
Q 002266 241 CFLSWSPNGKYMAT 254 (945)
Q Consensus 241 ~~l~fSpdg~~Las 254 (945)
.+++|+++|-.|..
T Consensus 183 ~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 183 TDLEFSKDGLTLYC 196 (452)
T ss_dssp EEEEECTTSSCEEE
T ss_pred EEEEEcCCCcEEEE
Confidence 77777775443333
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.44 E-value=0.12 Score=56.67 Aligned_cols=236 Identities=10% Similarity=0.000 Sum_probs=116.7
Q ss_pred CCCEEEEEEcCCCeEEEEcCCCCccccccccc----cccceEEEEEecCCCEEEEEEc-C---------CcEEEEEcCCC
Q 002266 28 QAHHLVTASSSETTISIHDPLLPSNLPKILRH----HRDGVTALALSPNSTCLASGSI-D---------HSVKLYKFPGG 93 (945)
Q Consensus 28 dg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~----h~~~V~~la~spdg~~Lasgs~-D---------g~V~iwdl~~g 93 (945)
+++.++++|.....+.+||..........+.. ......++. -++.+++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF--IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE--ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE--ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666666655668899998642111111111 111112222 25667777765 2 46889998876
Q ss_pred eeeeecccC-CCCEEEEEEecCCCEEEEEECC---------------------------------------CcEEEEEcC
Q 002266 94 EFQTNITRF-TLPIRVLAFNKSGSMLAAAGDD---------------------------------------EGIKLINTI 133 (945)
Q Consensus 94 ~~~~~l~~~-~~~V~~l~fspdg~~Lasgs~D---------------------------------------g~I~iwd~~ 133 (945)
+-...-... .......+...++++++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 533221111 1111111222577888888754 468899998
Q ss_pred CCeEEEEEecC-CCCE-EEEEEccCCCEEEEEeC------CCcEEEEEc--cCCeeeeeecccCCCCCCCCCCceEEEEc
Q 002266 134 DGSIARVLKGH-KGPV-TGLAFDPNSEYLASIDS------IGTVIYWEL--QSGRELHNLKRVAPDIGSDPSSMNVLSWS 203 (945)
Q Consensus 134 ~~~~~~~l~~h-~~~V-~~lafspdg~~Las~s~------Dg~I~iwDl--~t~~~i~~~~~~~~~~~~~~~~i~~l~~s 203 (945)
+.+-...-... ...- .+++.. ++.+++.|+. ...+.+||+ .+..-. .+... + .........+..
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~-~---~~~~~~~~~~~~ 250 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPV-S---SPDGVAGGFAGI 250 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCS-S---TTTCCBSCEEEE
T ss_pred CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCC-C---CCcccccceEEE
Confidence 76543322111 1111 223322 5666666653 235777876 333221 11111 1 001111111223
Q ss_pred CCCCEEEEEeCC----------------------CeEEEEECCC--CcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCC
Q 002266 204 PDGETLAVPGLK----------------------NDVVMYDRDT--AEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDR 259 (945)
Q Consensus 204 pdg~~La~gs~d----------------------g~I~vwD~~t--~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg 259 (945)
.+++.+++|+.+ ..+.+||+.+ |..+..+.... ..-.+ ..-++++++.|+.++
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~--~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR-AYGVS--LPWNNSLLIIGGETA 327 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC-BSSEE--EEETTEEEEEEEECG
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc-cccee--EEeCCEEEEEeeeCC
Confidence 367777777632 2578899875 45555544321 22222 234778888888643
Q ss_pred ------eEEEEECCCCeeeee
Q 002266 260 ------QILIWDVGKKLDIDR 274 (945)
Q Consensus 260 ------~I~IWD~~~~~~i~~ 274 (945)
.|.++++++++.+..
T Consensus 328 ~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 328 GGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp GGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCEeeeEEEEEEcCcEeEee
Confidence 466678888877665
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.35 E-value=4 Score=52.19 Aligned_cols=272 Identities=11% Similarity=0.029 Sum_probs=151.6
Q ss_pred ECCCCCEEEEEEcCCCeEEEEcCCCCcc-----ccccc----cccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCe-
Q 002266 25 WDQQAHHLVTASSSETTISIHDPLLPSN-----LPKIL----RHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGE- 94 (945)
Q Consensus 25 fspdg~~L~t~g~~dg~V~IWd~~~~~~-----~~~~l----~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~- 94 (945)
+..++.+++.+. .+|.+.+-.+...+. ....+ -+......++++-.+| +|+.|+..|.=.+|.+....
T Consensus 282 ~~~~~~~~LL~~-~~G~l~~l~l~~d~~~~~~~~V~~l~i~~~~~~~~~ssl~~l~~g-~lFvgS~~Gds~l~~~~~~~~ 359 (1158)
T 3ei3_A 282 VDPNGSRYLLGD-MEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG-VVFVGSRLGDSQLVKLNVDSN 359 (1158)
T ss_dssp CSTTSSEEEEEE-TTCEEEEEEEEEEC-----CEEEEEEEEEEEECSCCSEEEECSTT-EEEEECSSSCEEEEEECSSCC
T ss_pred EecCCCEEEEEe-CCCCEEEEEEEEcCCccCceeEEEEEEEEcCCccCccEEEEECCC-EEEEEEecCCcEEEEEecCCC
Confidence 344556666665 888887654332211 11111 1112233567776655 88888988888888776432
Q ss_pred -------eeeecccCCCCEEEEEEecC----CCEEEEEE---CCCcEEEEEcCCC-eEEEEEe-cCCCCEEEEEEc---c
Q 002266 95 -------FQTNITRFTLPIRVLAFNKS----GSMLAAAG---DDEGIKLINTIDG-SIARVLK-GHKGPVTGLAFD---P 155 (945)
Q Consensus 95 -------~~~~l~~~~~~V~~l~fspd----g~~Lasgs---~Dg~I~iwd~~~~-~~~~~l~-~h~~~V~~lafs---p 155 (945)
.+..+. .-+||.+++.... ...|++++ .+|.++++.-.-+ .....+. ..-..++.+... .
T Consensus 360 ~~~~~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~ 438 (1158)
T 3ei3_A 360 EQGSYVVAMETFT-NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE 438 (1158)
T ss_dssp TTSCCEEEEEEEC-CCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEEEEEEECCCSCCEEEEECCCSSCS
T ss_pred CccceEEeEeeec-CcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEEEEEeecCCCccEEEEEeecCCCC
Confidence 222232 3468988888642 23555554 3567877643211 1122221 122345555432 2
Q ss_pred CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCC
Q 002266 156 NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGD 235 (945)
Q Consensus 156 dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~ 235 (945)
...+|+.+..+.+ .|+.+... .+..+.. ..+......+.+-.+ .++ .++=.+ ...|++++......+..+...
T Consensus 439 ~~~yLvlS~~~~T-~Vl~i~~e-~veev~~--~gf~~~~~TL~~~~l-~~~-~ivQVt-~~~Irli~~~~~~~~~~w~~p 511 (1158)
T 3ei3_A 439 TDDTLVLSFVGQT-RVLMLNGE-EVEETEL--MGFVDDQQTFFCGNV-AHQ-QLIQIT-SASVRLVSQEPKALVSEWKEP 511 (1158)
T ss_dssp SCCEEEEEETTEE-EEEEEETT-EEEEECC--TTCCSSSCEEEEEEE-TTT-EEEEEE-SSCEEEEESSSCCEEEEECCT
T ss_pred CCCEEEEECCCCe-EEEEEeCC-ccccccc--ccccCCCCcEEEEEc-CCC-eEEEEe-cCEEEEEECCCCeEEEEEECC
Confidence 3568888777666 56665332 2332221 111111122222222 233 343333 456888888766666666654
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeee--eeccCCCCeeEEEEecC------CCEEEEEEc-CCeEEEEe
Q 002266 236 HVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI--DRQKFDDRICCMAWKPI------GNALAVIDV-MGKYGVWE 306 (945)
Q Consensus 236 h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i--~~~~~~~~V~~la~spd------g~~Las~s~-DG~I~iWd 306 (945)
....|...+.. +.+++.++ ++.|.++++..+... ........|.|+++.|. +.++++|.. |++|+|++
T Consensus 512 ~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 512 QAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp TCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 44567776654 34666665 678888888765433 23455778999999863 368999997 99999999
Q ss_pred cCC
Q 002266 307 SVV 309 (945)
Q Consensus 307 ~~~ 309 (945)
+..
T Consensus 589 L~~ 591 (1158)
T 3ei3_A 589 LPS 591 (1158)
T ss_dssp TTT
T ss_pred CCC
Confidence 863
No 327
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.32 E-value=1.3 Score=50.69 Aligned_cols=105 Identities=12% Similarity=0.185 Sum_probs=61.2
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccc-ccccc------ccccceEEEEEecC---CCEEEEEEc------
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNL-PKILR------HHRDGVTALALSPN---STCLASGSI------ 81 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~-~~~l~------~h~~~V~~la~spd---g~~Lasgs~------ 81 (945)
....+|+|.|+|+.+++-. ..+.|++++...+... ...+. .....+..|+|+|+ +..|+.+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~-~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTER-ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEET-TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEc-CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4578999999999777653 3347888875433211 11111 12467789999995 455544432
Q ss_pred -------CCcEEEEEcCCC--ee---eeec---c-cCCCCEEEEEEecCCCEEEEEEC
Q 002266 82 -------DHSVKLYKFPGG--EF---QTNI---T-RFTLPIRVLAFNKSGSMLAAAGD 123 (945)
Q Consensus 82 -------Dg~V~iwdl~~g--~~---~~~l---~-~~~~~V~~l~fspdg~~Lasgs~ 123 (945)
...|..|++..+ .. ...+ . ........|+|.|+|.+.++.++
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666655322 11 1111 1 11235789999999987777554
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.32 E-value=0.15 Score=54.67 Aligned_cols=230 Identities=14% Similarity=0.080 Sum_probs=115.2
Q ss_pred CCCCEEEEEEc---CCCeEEEEcCCCCccc-cccccccccceEEEEEecCCCEEEEEEc----C-----CcEEEEEcCCC
Q 002266 27 QQAHHLVTASS---SETTISIHDPLLPSNL-PKILRHHRDGVTALALSPNSTCLASGSI----D-----HSVKLYKFPGG 93 (945)
Q Consensus 27 pdg~~L~t~g~---~dg~V~IWd~~~~~~~-~~~l~~h~~~V~~la~spdg~~Lasgs~----D-----g~V~iwdl~~g 93 (945)
-++..++.+|. .-..+.+||..+..-. ...+....... +++. -++.+++.|+. + ..+.+||..+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 35566666652 1246788887654311 00111101111 2222 25667777665 2 46889998776
Q ss_pred eeeee--cccCCCCEEEEEEecCCCEEEEEECC-----CcEEEEEcCCCeEEEE--EecCCCCEEEEEEccCCCEEEEEe
Q 002266 94 EFQTN--ITRFTLPIRVLAFNKSGSMLAAAGDD-----EGIKLINTIDGSIARV--LKGHKGPVTGLAFDPNSEYLASID 164 (945)
Q Consensus 94 ~~~~~--l~~~~~~V~~l~fspdg~~Lasgs~D-----g~I~iwd~~~~~~~~~--l~~h~~~V~~lafspdg~~Las~s 164 (945)
+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.+++.|+
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 176 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGG 176 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeC
Confidence 53222 1111111222222 66777777643 3588899887653322 1111112222333 566777776
Q ss_pred CC-----CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE--ee
Q 002266 165 SI-----GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-----NDVVMYDRDTAEKLF--SL 232 (945)
Q Consensus 165 ~D-----g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d-----g~I~vwD~~t~~~~~--~~ 232 (945)
.+ ..+.+||+.+.+-... ... +. .......+.+ +++.+++|+.+ ..+.+||+.+.+-.. .+
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~-~~~-p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMI-TAM-NT---IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEC-CCC-SS---CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred CCCCCcCceEEEEeCCCCeEeeC-CCC-CC---ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence 54 4588999877653322 111 11 1111122333 67777887764 569999988754322 22
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeee
Q 002266 233 RGDHVQPICFLSWSPNGKYMATSSLD-----RQILIWDVGKKLDI 272 (945)
Q Consensus 233 ~~~h~~~I~~l~fSpdg~~Lasgs~D-----g~I~IWD~~~~~~i 272 (945)
.. .......+.+ ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 250 p~-~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 250 KH-RRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp SS-CCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CC-CccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 21 1111122222 66777777643 35778887765443
No 329
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.32 E-value=3.1 Score=50.56 Aligned_cols=276 Identities=13% Similarity=0.098 Sum_probs=155.0
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccc----cccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRH----HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG 93 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~----h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g 93 (945)
..|.++....+|...+.+ .. -+..++..+.......... ....|.++...+++..|..|+. +-|..++..++
T Consensus 146 ~~i~~i~~d~~g~lWigt--~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGT--YN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp SCEEEEEECTTCCEEEEE--TT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CeEEEEEEcCCCCEEEEe--CC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 568999888888866643 33 4777776543211111111 1234888888877775555554 34888887776
Q ss_pred eeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEec-------CCCCEEEEEEccCCCEEEEEeCC
Q 002266 94 EFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKG-------HKGPVTGLAFDPNSEYLASIDSI 166 (945)
Q Consensus 94 ~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~-------h~~~V~~lafspdg~~Las~s~D 166 (945)
+...........|.++....+|.+. +|+. +-+.+++..++........ ....|.++..+.+|.+-+ |+..
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~lW-igT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~ 298 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGDLL-AGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDY 298 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCCEE-EEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESS
T ss_pred eEEeccCCCCCeEEEEEEcCCCCEE-EEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCC
Confidence 5432211123357788777777654 4554 4588888776554322111 234689999888887444 4455
Q ss_pred CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEeecC------CCCC
Q 002266 167 GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE--KLFSLRG------DHVQ 238 (945)
Q Consensus 167 g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~--~~~~~~~------~h~~ 238 (945)
| +.++... . ....+.............|.++.-..+|.+. +|+.+ .+..++..++. ....+.. -...
T Consensus 299 G-l~~~~~~-~-~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lW-iGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 373 (758)
T 3ott_A 299 G-ISLSRYN-S-ALQFIPISQITGTGDGNQFYSLFRDSKGFYW-FGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHN 373 (758)
T ss_dssp S-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECTTCCEE-EEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCS
T ss_pred c-ccccccC-C-ceeEEecccCCCCCCCceEEEEEEcCCCCEE-EeeCC-cceeecccccccceeEEeccCCcCCCCCCC
Confidence 6 5444321 1 1111110000001123457778777777644 45544 57777766532 1111211 0124
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec--c-----CCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ--K-----FDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~--~-----~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.|.++.-..+|++.+ |+ ++-|..||..++...... . ....|.++.-..+|+ |-.|+..+-|.+++..
T Consensus 374 ~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 374 RIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKH 447 (758)
T ss_dssp CEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHH
T ss_pred ceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccc
Confidence 588888888887554 44 457999999887654331 1 123577777766664 5556666568888743
No 330
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.28 E-value=0.39 Score=51.75 Aligned_cols=198 Identities=6% Similarity=0.055 Sum_probs=114.3
Q ss_pred ecCCCEEEEEEc--CCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECC--------------CcEEEEEcC
Q 002266 70 SPNSTCLASGSI--DHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDD--------------EGIKLINTI 133 (945)
Q Consensus 70 spdg~~Lasgs~--Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~D--------------g~I~iwd~~ 133 (945)
+.++.+|+.... ++.|+..+..... ...+... .+--++++|.+|+.+... ..|+..++.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 356667776542 4566666654333 3333321 234567899998888653 357777776
Q ss_pred CCeEEEEEecCCCCEEEEEEccCCCEEEEEe--CCC--cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE
Q 002266 134 DGSIARVLKGHKGPVTGLAFDPNSEYLASID--SIG--TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL 209 (945)
Q Consensus 134 ~~~~~~~l~~h~~~V~~lafspdg~~Las~s--~Dg--~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L 209 (945)
.+.... +.. .. +..|++++++|+.+. .++ .|...++.... ...+... . + ..|+++|+.|
T Consensus 97 g~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~-------~--~--~~~~~~g~~i 159 (302)
T 3s25_A 97 GHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNH-------Y--L--FTCNTSDRYF 159 (302)
T ss_dssp SCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESS-------C--C--CCSEEETTEE
T ss_pred CCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCC-------C--c--eEeeEECCEE
Confidence 655332 322 22 236778888888776 334 45555554332 2223211 0 1 3456788888
Q ss_pred EEEeC-CCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECC--CeEEEEECCCCeeeeeccCCCCeeEEEE
Q 002266 210 AVPGL-KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLD--RQILIWDVGKKLDIDRQKFDDRICCMAW 286 (945)
Q Consensus 210 a~gs~-dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D--g~I~IWD~~~~~~i~~~~~~~~V~~la~ 286 (945)
+..+. ...|++.++..+.....+.+ ... ..++|++.+|+-.... ..|..-++......... ...+ ..|
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt--~~~~--~~~ 230 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYDC----NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT--EANI--EHY 230 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEECS----CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECS--CSCE--EEE
T ss_pred EEEeCCCceEEEEECCCCCEEEEeCC----Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe--CCCc--ceE
Confidence 87665 57899999887654433332 222 3466999988877644 35666677665433332 2233 348
Q ss_pred ecCCCEEEEEEc
Q 002266 287 KPIGNALAVIDV 298 (945)
Q Consensus 287 spdg~~Las~s~ 298 (945)
+|++..|+.++.
T Consensus 231 ~~~g~~Iy~~~~ 242 (302)
T 3s25_A 231 NVYGSLIFYQRG 242 (302)
T ss_dssp EEETTEEEEEEC
T ss_pred EECCCEEEEEEC
Confidence 888888877644
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.20 E-value=0.15 Score=57.00 Aligned_cols=152 Identities=16% Similarity=0.177 Sum_probs=97.4
Q ss_pred EecCCCEEEEEEcCCcEEEEEcCCCeeeeecccC----CCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCe--------
Q 002266 69 LSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRF----TLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS-------- 136 (945)
Q Consensus 69 ~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~----~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~-------- 136 (945)
.+.+|..++.+- ++.||.-++......+.+... -..|..+..+|+|++||..+. ..|.|..+..+.
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccc
Confidence 345666666643 467887777643322232221 225788999999999999865 478888887321
Q ss_pred ----EEEEEec------CCCCEEEEEEccC---CCEEEEEeCCCcEEEEEccCCeee-eeecccCCC--CCCCCCCceEE
Q 002266 137 ----IARVLKG------HKGPVTGLAFDPN---SEYLASIDSIGTVIYWELQSGREL-HNLKRVAPD--IGSDPSSMNVL 200 (945)
Q Consensus 137 ----~~~~l~~------h~~~V~~lafspd---g~~Las~s~Dg~I~iwDl~t~~~i-~~~~~~~~~--~~~~~~~i~~l 200 (945)
..+.+.- ...+|..+.|||- +..|++-..|+.|++||+...... ..+...... .......+.++
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 1223332 2578999999994 568999999999999999863211 123221111 11223567899
Q ss_pred EEcCCCCEEEEEe--CCCeEEEEE
Q 002266 201 SWSPDGETLAVPG--LKNDVVMYD 222 (945)
Q Consensus 201 ~~spdg~~La~gs--~dg~I~vwD 222 (945)
+|.++|-.|.+.+ ..|.|+-.-
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEES
T ss_pred EEcCCCcEEEEEecCCCCCEEEEC
Confidence 9999887777755 778887553
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.11 E-value=0.4 Score=51.31 Aligned_cols=223 Identities=11% Similarity=0.074 Sum_probs=111.5
Q ss_pred CCCEEEEEEc----CCcEEEEEcCCCeeeeecccCCCC-E-EEEEEecCCCEEEEEEC----C-----CcEEEEEcCCCe
Q 002266 72 NSTCLASGSI----DHSVKLYKFPGGEFQTNITRFTLP-I-RVLAFNKSGSMLAAAGD----D-----EGIKLINTIDGS 136 (945)
Q Consensus 72 dg~~Lasgs~----Dg~V~iwdl~~g~~~~~l~~~~~~-V-~~l~fspdg~~Lasgs~----D-----g~I~iwd~~~~~ 136 (945)
++.+++.|+. -..+.+||..+.+-.. +.....+ . .+++ ..++.+++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLR-LADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeE-CCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3445555552 1357788877665322 1111111 0 1122 226677777765 2 468899988765
Q ss_pred EEEE--EecCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEE
Q 002266 137 IARV--LKGHKGPVTGLAFDPNSEYLASIDSI-----GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETL 209 (945)
Q Consensus 137 ~~~~--l~~h~~~V~~lafspdg~~Las~s~D-----g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~L 209 (945)
-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-. . +. .......+.+ +++.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~-p~---~r~~~~~~~~--~~~iy 172 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP-M-LT---RRIGVGVAVL--NRLLY 172 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCC-C-SS---CCBSCEEEEE--TTEEE
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCC-C-Cc---cccceEEEEE--CCEEE
Confidence 3322 1111112222333 56667776543 358889988765332211 1 11 1111122222 67777
Q ss_pred EEEeCC-----CeEEEEECCCCcEEE--eecCCCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeeeeeccC
Q 002266 210 AVPGLK-----NDVVMYDRDTAEKLF--SLRGDHVQPICFLSWSPNGKYMATSSLD-----RQILIWDVGKKLDIDRQKF 277 (945)
Q Consensus 210 a~gs~d-----g~I~vwD~~t~~~~~--~~~~~h~~~I~~l~fSpdg~~Lasgs~D-----g~I~IWD~~~~~~i~~~~~ 277 (945)
+.|+.+ ..+.+||+.+.+-.. .+.. .......+.+ ++++++.|+.+ ..+.+||+.+..-......
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMITAMNT-IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCCCCCC-ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence 777654 468999987654322 2221 1111222223 67777777654 5699999988765544222
Q ss_pred CC--CeeEEEEecCCCEEEEEEcC-----CeEEEEecCC
Q 002266 278 DD--RICCMAWKPIGNALAVIDVM-----GKYGVWESVV 309 (945)
Q Consensus 278 ~~--~V~~la~spdg~~Las~s~D-----G~I~iWd~~~ 309 (945)
.. .-.+++. -+++.++.|+.+ ..+.+||+..
T Consensus 250 p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 250 KHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp SSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 11 1122222 255566666643 3456666544
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.04 E-value=0.5 Score=50.79 Aligned_cols=218 Identities=13% Similarity=0.121 Sum_probs=106.2
Q ss_pred eEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEc----CC-------cEEEEEcCCCeeeeecccCCCC--EE
Q 002266 41 TISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSI----DH-------SVKLYKFPGGEFQTNITRFTLP--IR 107 (945)
Q Consensus 41 ~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~----Dg-------~V~iwdl~~g~~~~~l~~~~~~--V~ 107 (945)
.+.+||..+..-....+..........+...++.+++.|+. ++ .+.+||..+.+-.. +.....+ -.
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-LPPLPSARCLF 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-CSCBSSCBCSC
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-CCCCCcccccc
Confidence 47889987654211111111111122233456778888873 12 17788887665332 2111111 11
Q ss_pred EEEEecCCCEEEEEECC-------CcEEEEEcCCCeEEEEEecCCCCE--EEEEEccCCCEEEEEeC------CCcEEEE
Q 002266 108 VLAFNKSGSMLAAAGDD-------EGIKLINTIDGSIARVLKGHKGPV--TGLAFDPNSEYLASIDS------IGTVIYW 172 (945)
Q Consensus 108 ~l~fspdg~~Lasgs~D-------g~I~iwd~~~~~~~~~l~~h~~~V--~~lafspdg~~Las~s~------Dg~I~iw 172 (945)
+++. -++.+++.|+.+ ..+.+||+.+.+-...- ....+. .+++. .++.+++.|+. -..+.+|
T Consensus 104 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 104 GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 1222 266777888754 24788898876543221 111111 11222 35666676654 2358999
Q ss_pred EccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCc--EEEeecCCCCCCeEEEEE
Q 002266 173 ELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLK-----NDVVMYDRDTAE--KLFSLRGDHVQPICFLSW 245 (945)
Q Consensus 173 Dl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~d-----g~I~vwD~~t~~--~~~~~~~~h~~~I~~l~f 245 (945)
|+.+.+-... ... +. .......+.+ +++.+++|+.+ ..+.+||+.+.+ .+..+.. .......+
T Consensus 181 d~~~~~W~~~-~~~-p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~-- 250 (318)
T 2woz_A 181 NPKKGDWKDL-APM-KT---PRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ-ERSSISLV-- 250 (318)
T ss_dssp ETTTTEEEEE-CCC-SS---CCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSS-CCBSCEEE--
T ss_pred cCCCCEEEEC-CCC-CC---CcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCC-cccceEEE--
Confidence 9987753322 111 11 0111122222 67777777653 357889987654 2222221 11111222
Q ss_pred cCCCCEEEEEECC--------------CeEEEEECCCCeee
Q 002266 246 SPNGKYMATSSLD--------------RQILIWDVGKKLDI 272 (945)
Q Consensus 246 Spdg~~Lasgs~D--------------g~I~IWD~~~~~~i 272 (945)
.-++++++.|+.+ ..+.+||+.+.+-.
T Consensus 251 ~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 251 SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 2256777776643 34777787765443
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.00 E-value=1.2 Score=47.77 Aligned_cols=209 Identities=11% Similarity=0.069 Sum_probs=106.4
Q ss_pred EEEEEEcCCcEEEEEcCCCeeee-ecccCCCCEEEEEEecCCCEEEEEEC----CC-------cEEEEEcCCCeEEEEEe
Q 002266 75 CLASGSIDHSVKLYKFPGGEFQT-NITRFTLPIRVLAFNKSGSMLAAAGD----DE-------GIKLINTIDGSIARVLK 142 (945)
Q Consensus 75 ~Lasgs~Dg~V~iwdl~~g~~~~-~l~~~~~~V~~l~fspdg~~Lasgs~----Dg-------~I~iwd~~~~~~~~~l~ 142 (945)
+++.|+ ..+.+||..+++-.. .+..........+...++..++.|+. ++ .+.+||+.+.+-.. +.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence 344444 568999988776432 11111122233334457788888884 11 27788988765322 11
Q ss_pred cCCCC---EEEEEEccCCCEEEEEeCC--------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEE
Q 002266 143 GHKGP---VTGLAFDPNSEYLASIDSI--------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAV 211 (945)
Q Consensus 143 ~h~~~---V~~lafspdg~~Las~s~D--------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~ 211 (945)
.-..+ ...+.+ ++.+++.|+.+ ..+.+||+.+.+-.. +... +.. ... .+++. .+++.++.
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~-p~~---r~~-~~~~~-~~~~iyv~ 154 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE-SDPL-PYV---VYG-HTVLS-HMDLVYVI 154 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE-CCCC-SSC---CBS-CEEEE-ETTEEEEE
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE-CCCC-CCc---ccc-eeEEE-ECCEEEEE
Confidence 11111 112222 56666666632 358899988765322 1111 110 111 12222 36677777
Q ss_pred EeC------CCeEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECCC-----eEEEEECCCCeeeeeccCC
Q 002266 212 PGL------KNDVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLDR-----QILIWDVGKKLDIDRQKFD 278 (945)
Q Consensus 212 gs~------dg~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg-----~I~IWD~~~~~~i~~~~~~ 278 (945)
|+. -..+.+||..+.+- +..+.. ....-..+.+ ++++++.|+.++ .+.+||+.+.+-.......
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 231 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKFEWKELAPMQT-ARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFP 231 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCS
T ss_pred eCCCCCCcccceEEEEeCCCCeEEECCCCCC-chhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCC
Confidence 776 24699999886542 222221 1111122222 677778777654 5889999887555443221
Q ss_pred --CCeeEEEEecCCCEEEEEEcC
Q 002266 279 --DRICCMAWKPIGNALAVIDVM 299 (945)
Q Consensus 279 --~~V~~la~spdg~~Las~s~D 299 (945)
..-.+++ .-+++.++.|+.+
T Consensus 232 ~~r~~~~~~-~~~~~l~v~GG~~ 253 (315)
T 4asc_A 232 QERSSLSLV-SLVGTLYAIGGFA 253 (315)
T ss_dssp SCCBSCEEE-EETTEEEEEEEEE
T ss_pred CcccceeEE-EECCEEEEECCcc
Confidence 1112222 2256667777653
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.3 Score=53.47 Aligned_cols=205 Identities=11% Similarity=0.049 Sum_probs=111.6
Q ss_pred CEEEEEEcCCcEEEEEcCCCeeeeecccC-CCCEEEEEEe--cCCCEEEEE--ECCCcEEEEEcCCCeEEEEEec----C
Q 002266 74 TCLASGSIDHSVKLYKFPGGEFQTNITRF-TLPIRVLAFN--KSGSMLAAA--GDDEGIKLINTIDGSIARVLKG----H 144 (945)
Q Consensus 74 ~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~-~~~V~~l~fs--pdg~~Lasg--s~Dg~I~iwd~~~~~~~~~l~~----h 144 (945)
.+++.++.||.|.-+|..+|+..-.+... ..++....-. +.+..++++ +.||.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888899999999999999887776543 1222221100 112234443 5899999999988855444331 1
Q ss_pred CCCEEE---EEE-cc----CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEE---Ec--CCCCEEEE
Q 002266 145 KGPVTG---LAF-DP----NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLS---WS--PDGETLAV 211 (945)
Q Consensus 145 ~~~V~~---laf-sp----dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~---~s--pdg~~La~ 211 (945)
..++.. ... .+ .+..+++++.+|.+...|+.+|+.+..+....+..........|.. +. -.+..|++
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 223321 000 01 4567889999999999999999999887643211000000000111 10 12456777
Q ss_pred EeCCCeEEEEECCCCcEEEeecC----CCCCC--eE-EEEEcCCCCEEEEEECCCeEEEEECCCCeeee-eccCCCCe
Q 002266 212 PGLKNDVVMYDRDTAEKLFSLRG----DHVQP--IC-FLSWSPNGKYMATSSLDRQILIWDVGKKLDID-RQKFDDRI 281 (945)
Q Consensus 212 gs~dg~I~vwD~~t~~~~~~~~~----~h~~~--I~-~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~-~~~~~~~V 281 (945)
+..+..+.+.+ ++++ +..+.- ..... +. .-..+.++.+ +.++.||.|.-+|..++..+- ......++
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W~~~~l~sPv 245 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARWVSPTFPGII 245 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEEECCCCSSCE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEEEeecCCCCe
Confidence 77777777766 3443 221110 00000 00 0001224666 446788999999988888776 44455444
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.89 E-value=0.45 Score=60.73 Aligned_cols=257 Identities=11% Similarity=0.103 Sum_probs=148.5
Q ss_pred CCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCE
Q 002266 38 SETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSM 117 (945)
Q Consensus 38 ~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~ 117 (945)
....|.|.|+..+....+.-..- -+.-.+|..+.||.-. ..+++|+++.+...+.... ...+|.--.|-.+ +.
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~A----dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~-~~ 118 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL-NT 118 (1630)
T ss_pred CCceEEEEECCCCCCcccccccc----hhhccCCCcceEEEec-CCeEEEeehHHhhhhcccc-cCCCceEEEecCC-Ce
Confidence 34478888887765432221111 1233577777776644 6789999998876655544 3556777777655 34
Q ss_pred EEEEECCCcEEEEEcCC-CeEEEEEecC----CCCEEEEEEccCCCEEEEEe-------CCCcEEEEEccCCeeeeeecc
Q 002266 118 LAAAGDDEGIKLINTID-GSIARVLKGH----KGPVTGLAFDPNSEYLASID-------SIGTVIYWELQSGRELHNLKR 185 (945)
Q Consensus 118 Lasgs~Dg~I~iwd~~~-~~~~~~l~~h----~~~V~~lafspdg~~Las~s-------~Dg~I~iwDl~t~~~i~~~~~ 185 (945)
|+..+ +..|+.|++.. ..+...+..| ...|..-..+++.++++..+ ..|.+.+|+...+.. +.+.+
T Consensus 119 l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~ieg 196 (1630)
T 1xi4_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEG 196 (1630)
T ss_pred eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhH
Confidence 44443 45799999964 2343344333 46687888899999877544 347888888765422 22222
Q ss_pred cCCCCC-----CCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCC---cEEE-------eecC-CCCCCeEEEEEcCCC
Q 002266 186 VAPDIG-----SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA---EKLF-------SLRG-DHVQPICFLSWSPNG 249 (945)
Q Consensus 186 ~~~~~~-----~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~---~~~~-------~~~~-~h~~~I~~l~fSpdg 249 (945)
+...+. +...+..-++|.... ...+.++|.++... .+.+ .++. ....-..++..|+.-
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~------~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~ 270 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRG------QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 270 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEec------CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc
Confidence 211110 011111112222111 01268888887543 1111 1111 012233457778877
Q ss_pred CEEEEEECCCeEEEEECCCCeeeeeccC-CCCeeEEEEecCCCEEEEEEcCCeEEEEecCC
Q 002266 250 KYMATSSLDRQILIWDVGKKLDIDRQKF-DDRICCMAWKPIGNALAVIDVMGKYGVWESVV 309 (945)
Q Consensus 250 ~~Lasgs~Dg~I~IWD~~~~~~i~~~~~-~~~V~~la~spdg~~Las~s~DG~I~iWd~~~ 309 (945)
..+...+.-|.|.+||+.++..+..... ..+|...+-+....-++.....|.|.--.+..
T Consensus 271 g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 271 DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred CEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 7888888899999999999999887443 44555555554444566666778766555443
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.75 E-value=0.42 Score=52.56 Aligned_cols=116 Identities=18% Similarity=0.202 Sum_probs=68.6
Q ss_pred EEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC---CCEEEEE---e
Q 002266 140 VLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD---GETLAVP---G 213 (945)
Q Consensus 140 ~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd---g~~La~g---s 213 (945)
.+...-...+.|+|.|+|.++++--..|.|++++...+... .+................++++|+ +.+|++. .
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 33334456789999999997776655899999986555432 121111111123456788999995 4445443 2
Q ss_pred CCCeEEEEECCC----------CcEEE-eecCCCCCCeEEEEEcCCCCEEEEEE
Q 002266 214 LKNDVVMYDRDT----------AEKLF-SLRGDHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 214 ~dg~I~vwD~~t----------~~~~~-~~~~~h~~~I~~l~fSpdg~~Lasgs 256 (945)
.++.|.-|.... .+.+. .+..........|.|.|+|.+.++.+
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 355677776654 12222 23221222456799999998777754
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.69 E-value=0.65 Score=53.11 Aligned_cols=111 Identities=14% Similarity=0.217 Sum_probs=64.9
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCC--CCCCCCceEEEEcCC---CCEEEEEeC-----
Q 002266 145 KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDI--GSDPSSMNVLSWSPD---GETLAVPGL----- 214 (945)
Q Consensus 145 ~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~--~~~~~~i~~l~~spd---g~~La~gs~----- 214 (945)
-.....|+|.|+|+++++-...+.|++++..++.... +....... ......+..++|+|+ +..|.+...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~-~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKT-VFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeE-EecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3456899999999977765444578888765554322 11111111 012356778999995 555555432
Q ss_pred --------CCeEEEEECCCC-------cEEEe-ecCCCCCCeEEEEEcCCCCEEEEEE
Q 002266 215 --------KNDVVMYDRDTA-------EKLFS-LRGDHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 215 --------dg~I~vwD~~t~-------~~~~~-~~~~h~~~I~~l~fSpdg~~Lasgs 256 (945)
...|..|+.... +.+.. +..........|+|.|+|.+.++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665322 12222 3322233578899999998777655
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.51 E-value=4.9 Score=46.40 Aligned_cols=223 Identities=14% Similarity=0.108 Sum_probs=129.9
Q ss_pred CCCEEEEEE-cCCcEEEEEcCCCeeeeeccc-CCCCEEEEEEe--cCCCEEEEEEC-------CCcE------------E
Q 002266 72 NSTCLASGS-IDHSVKLYKFPGGEFQTNITR-FTLPIRVLAFN--KSGSMLAAAGD-------DEGI------------K 128 (945)
Q Consensus 72 dg~~Lasgs-~Dg~V~iwdl~~g~~~~~l~~-~~~~V~~l~fs--pdg~~Lasgs~-------Dg~I------------~ 128 (945)
||++|+.-. .+..|-..++...++...+.- ....+..++|. |+-.++++++. ||.. .
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 778888866 357788889888877665542 34578888886 67778888764 2221 1
Q ss_pred EEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCC---------------cEEEEEccC-------Ce--e-----
Q 002266 129 LINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIG---------------TVIYWELQS-------GR--E----- 179 (945)
Q Consensus 129 iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg---------------~I~iwDl~t-------~~--~----- 179 (945)
..|..+.+....+.. .+..-.+..+++|.+.++.+.+. .+.++++.. |+ .
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 123333332222211 22333455678888888876542 366666532 11 1
Q ss_pred eeeecccCCCC-C-------CCCCCceEEEEcCCCCEEEEEeC-CCeEEEEECCCCcE-------------EEeecCCCC
Q 002266 180 LHNLKRVAPDI-G-------SDPSSMNVLSWSPDGETLAVPGL-KNDVVMYDRDTAEK-------------LFSLRGDHV 237 (945)
Q Consensus 180 i~~~~~~~~~~-~-------~~~~~i~~l~~spdg~~La~gs~-dg~I~vwD~~t~~~-------------~~~~~~~h~ 237 (945)
+..+....... . ..+.....+..+|||+++++++. +.++.++|.+.... ..... -.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~G 377 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LG 377 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CC
Confidence 11111100000 0 01122345889999999988765 77899999874211 22222 23
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCC----------eeeeeccCCCCeeEEEE------ecCCCEEEEEE
Q 002266 238 QPICFLSWSPNGKYMATSSLDRQILIWDVGKK----------LDIDRQKFDDRICCMAW------KPIGNALAVID 297 (945)
Q Consensus 238 ~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~----------~~i~~~~~~~~V~~la~------spdg~~Las~s 297 (945)
......+|.++|....+...|..|.-|++... .++........+-.+.- .|+|++|++..
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 46677999999955555668999999998653 33444333333333333 56788888764
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.46 E-value=1.5 Score=50.52 Aligned_cols=223 Identities=13% Similarity=0.124 Sum_probs=136.0
Q ss_pred EEEEEcCCcEEEEEcCCCeeeeecccCC-------------------------CCE--EEEEEe---cCCCEEEEEEC-C
Q 002266 76 LASGSIDHSVKLYKFPGGEFQTNITRFT-------------------------LPI--RVLAFN---KSGSMLAAAGD-D 124 (945)
Q Consensus 76 Lasgs~Dg~V~iwdl~~g~~~~~l~~~~-------------------------~~V--~~l~fs---pdg~~Lasgs~-D 124 (945)
|.+|+..|.|+|+-+++++.+..+.-+. +.. ..+++. -||++|.+-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 5678889999999999998776553221 111 123333 26778888764 4
Q ss_pred CcEEEEEcCCCeEEEEEe-cCCCCEEEEEEc--cCCCEEEEEeC-------CCcE---------EE---EEccCCeeeee
Q 002266 125 EGIKLINTIDGSIARVLK-GHKGPVTGLAFD--PNSEYLASIDS-------IGTV---------IY---WELQSGRELHN 182 (945)
Q Consensus 125 g~I~iwd~~~~~~~~~l~-~h~~~V~~lafs--pdg~~Las~s~-------Dg~I---------~i---wDl~t~~~i~~ 182 (945)
..|...++...++-..+. .....+.++.|- |+-.|+++++. ||.. .+ .|..+.+...+
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 568888998887766554 345678888886 67778887764 2221 11 11111111111
Q ss_pred ecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCC---------------eEEEEEC------------------------
Q 002266 183 LKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKN---------------DVVMYDR------------------------ 223 (945)
Q Consensus 183 ~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg---------------~I~vwD~------------------------ 223 (945)
+.. ......+...++|++.++.+.+. .+.++++
T Consensus 233 v~v--------~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD 304 (638)
T 3sbq_A 233 VIV--------DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLD 304 (638)
T ss_dssp EEE--------SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEE
T ss_pred EEc--------CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEc
Confidence 110 11223355677888877765321 3555553
Q ss_pred -CC----CcE-EEeecCCCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCC------ee-------eeeccCCCCeeE
Q 002266 224 -DT----AEK-LFSLRGDHVQPICFLSWSPNGKYMATSSL-DRQILIWDVGKK------LD-------IDRQKFDDRICC 283 (945)
Q Consensus 224 -~t----~~~-~~~~~~~h~~~I~~l~fSpdg~~Lasgs~-Dg~I~IWD~~~~------~~-------i~~~~~~~~V~~ 283 (945)
+. +.. ++.++ -......+.++|||+|++.++. +.++.|+|+.+- ++ +......-....
T Consensus 305 ~~~~~~~~~~~~~~iP--~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlH 382 (638)
T 3sbq_A 305 GRKKDGKDSKFTRYVP--VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLH 382 (638)
T ss_dssp CSCBTTBCCSSEEEEE--ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEE
T ss_pred cccccccCCceEEEEe--CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccE
Confidence 22 111 11111 1234456889999999887764 789999998742 11 223445567889
Q ss_pred EEEecCCCEEEEEEcCCeEEEEecC
Q 002266 284 MAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 284 la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.+|.++|+...+.-.|..|.-|++.
T Consensus 383 t~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 383 TTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EEECSSSEEEEEETTTTEEEEEEHH
T ss_pred EEECCCCceEeeeeecceEEEEecc
Confidence 9999999666666789999999975
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.44 E-value=0.36 Score=61.66 Aligned_cols=241 Identities=13% Similarity=0.090 Sum_probs=140.7
Q ss_pred ECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCC-CeeeeecccC-
Q 002266 25 WDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPG-GEFQTNITRF- 102 (945)
Q Consensus 25 fspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~-g~~~~~l~~~- 102 (945)
.+|..+.|+.-. ..++.|+|+.+..... ...- ..+|.--.|-.+. .|+..+ +..|+.|++.+ ..+...+.+|
T Consensus 73 MnP~~~iiALra--g~~lQiFnl~~k~klk-s~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 73 MNPASKVIALKA--GKTLQIFNIEMKSKMK-AHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred cCCCcceEEEec--CCeEEEeehHHhhhhc-cccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 577777676653 6799999997764322 2222 3567777887654 444433 35799999964 2344455555
Q ss_pred ---CCCEEEEEEecCCCEEEEEE-------CCCcEEEEEcCCCeEEEEEecCCCCEEEEEEcc--C-CCEEEEEeC---C
Q 002266 103 ---TLPIRVLAFNKSGSMLAAAG-------DDEGIKLINTIDGSIARVLKGHKGPVTGLAFDP--N-SEYLASIDS---I 166 (945)
Q Consensus 103 ---~~~V~~l~fspdg~~Lasgs-------~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafsp--d-g~~Las~s~---D 166 (945)
...|..-..+++.++++..| -.|.+.+|..+.+ ..+.+.||.+....+.... . ...++.+.. .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 34576777788889887654 2477889988654 3455666765554444421 1 123332222 3
Q ss_pred CcEEEEEccCC-eeeeeecccCCCCC----CCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeE
Q 002266 167 GTVIYWELQSG-RELHNLKRVAPDIG----SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPIC 241 (945)
Q Consensus 167 g~I~iwDl~t~-~~i~~~~~~~~~~~----~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~ 241 (945)
+.+.|.++... .....+......+. ........+..++.-..+.+-+.-|.|++||+.++.+++.-.- ...+|.
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri-s~~~iF 304 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIF 304 (1630)
T ss_pred ceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccc-cCCceE
Confidence 68888888543 11111110000000 1123335577788777788888999999999999998766543 334444
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCeeee
Q 002266 242 FLSWSPNGKYMATSSLDRQILIWDVGKKLDID 273 (945)
Q Consensus 242 ~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~ 273 (945)
..+-.....-+++....|.|.-..+.....+.
T Consensus 305 ~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~ 336 (1630)
T 1xi4_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 336 (1630)
T ss_pred EeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence 44444333334444466776666665554443
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.29 E-value=0.1 Score=53.26 Aligned_cols=178 Identities=17% Similarity=0.148 Sum_probs=94.7
Q ss_pred CEEEEEEcCCcEEEEEcCCCee------eeeccc-CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCe------EEEE
Q 002266 74 TCLASGSIDHSVKLYKFPGGEF------QTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGS------IARV 140 (945)
Q Consensus 74 ~~Lasgs~Dg~V~iwdl~~g~~------~~~l~~-~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~------~~~~ 140 (945)
..|++...| +|+.=..+.+.. ...+.. .=..+.+++|+|+|.+.++ .+|.++-.+..+.. ....
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 455666666 555544444431 111111 0136779999999987777 67776666654411 1111
Q ss_pred Ee--cCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCC-CCCCCceEEEEcCCCCEEEEEeCCCe
Q 002266 141 LK--GHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIG-SDPSSMNVLSWSPDGETLAVPGLKND 217 (945)
Q Consensus 141 l~--~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~-~~~~~i~~l~~spdg~~La~gs~dg~ 217 (945)
+- +-.. ...+.|+|+|.+.++ .||.|+-++-.+.....-+.. ...+. ..-..+..+.+.|+|.+.++. ++.
T Consensus 82 IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~-a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 82 IGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIAR-ATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp EECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-SEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred eccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceecc-ccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 11 1111 478999999988777 569887776432111000000 00000 011346789999999988887 777
Q ss_pred EEEEECCCCc------EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEE
Q 002266 218 VVMYDRDTAE------KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQIL 262 (945)
Q Consensus 218 I~vwD~~t~~------~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~ 262 (945)
++-....+.. ....+-...-.....+.|+++|.+.++. +|.++
T Consensus 156 lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 156 FYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred EEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 6543332111 0111111122344557789998877766 66443
No 343
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.26 E-value=0.2 Score=51.10 Aligned_cols=102 Identities=15% Similarity=0.128 Sum_probs=63.9
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCC--------EEEEEEecCCCEEEEEECCCcEEEEEcC
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLP--------IRVLAFNKSGSMLAAAGDDEGIKLINTI 133 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~--------V~~l~fspdg~~Lasgs~Dg~I~iwd~~ 133 (945)
..+..++|+|+|.+.++ .+|.++-.+..+.....-+. .... ..++.|.++|.+.++ .||.|+-++..
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 46789999999986666 67776666654422111111 1111 468899999988888 55888877753
Q ss_pred CCeEE------EEE-ecCCCCEEEEEEccCCCEEEEEeCCCcEE
Q 002266 134 DGSIA------RVL-KGHKGPVTGLAFDPNSEYLASIDSIGTVI 170 (945)
Q Consensus 134 ~~~~~------~~l-~~h~~~V~~lafspdg~~Las~s~Dg~I~ 170 (945)
+.... ..+ ..-=..+..|.|.|+|.+.++. |+.++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 32110 111 1111457999999999877776 77754
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.85 E-value=1.9 Score=46.01 Aligned_cols=179 Identities=8% Similarity=0.046 Sum_probs=90.8
Q ss_pred cEEEEEcCCCeeeee-cccCCCCEEEEEEecCCCEEEEEEC----CC-------cEEEEEcCCCeEEEE--EecCCCCEE
Q 002266 84 SVKLYKFPGGEFQTN-ITRFTLPIRVLAFNKSGSMLAAAGD----DE-------GIKLINTIDGSIARV--LKGHKGPVT 149 (945)
Q Consensus 84 ~V~iwdl~~g~~~~~-l~~~~~~V~~l~fspdg~~Lasgs~----Dg-------~I~iwd~~~~~~~~~--l~~h~~~V~ 149 (945)
.+.+||..+.+-... +..........+...++..++.|+. ++ .+.+||..+.+-... +........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 378899877764331 1111111223334457788888873 12 177888877654322 111111122
Q ss_pred EEEEccCCCEEEEEeCC-------CcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC------CC
Q 002266 150 GLAFDPNSEYLASIDSI-------GTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL------KN 216 (945)
Q Consensus 150 ~lafspdg~~Las~s~D-------g~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~------dg 216 (945)
.+.+ ++.+++.|+.+ ..+.+||+.+.+-...-... ... .. .+++. .+++.++.|+. -.
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r----~~-~~~~~-~~~~iyv~GG~~~~~~~~~ 175 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKV----YG-HNVIS-HNGMIYCLGGKTDDKKCTN 175 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCE----ES-CEEEE-ETTEEEEECCEESSSCBCC
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-Ccc----cc-cEEEE-ECCEEEEEcCCCCCCCccc
Confidence 2222 56677777654 24788888776533221111 100 11 11222 46777777764 24
Q ss_pred eEEEEECCCCcE--EEeecCCCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeeeee
Q 002266 217 DVVMYDRDTAEK--LFSLRGDHVQPICFLSWSPNGKYMATSSLD-----RQILIWDVGKKLDIDR 274 (945)
Q Consensus 217 ~I~vwD~~t~~~--~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D-----g~I~IWD~~~~~~i~~ 274 (945)
.+.+||..+.+- +..+.. .......+. -++++++.|+.+ ..+.+||+.+.+-...
T Consensus 176 ~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 176 RVFIYNPKKGDWKDLAPMKT-PRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp CEEEEETTTTEEEEECCCSS-CCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC
T ss_pred eEEEEcCCCCEEEECCCCCC-CcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEEC
Confidence 699999887542 222221 111112222 266777777643 3578899887655443
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.63 E-value=0.6 Score=50.98 Aligned_cols=218 Identities=9% Similarity=-0.045 Sum_probs=103.8
Q ss_pred CCCEEEEEEc-CCcEEEEEcCC-CeeeeecccCC----CCEEEEEEecCCCEEEEEEC-C---------CcEEEEEcCCC
Q 002266 72 NSTCLASGSI-DHSVKLYKFPG-GEFQTNITRFT----LPIRVLAFNKSGSMLAAAGD-D---------EGIKLINTIDG 135 (945)
Q Consensus 72 dg~~Lasgs~-Dg~V~iwdl~~-g~~~~~l~~~~----~~V~~l~fspdg~~Lasgs~-D---------g~I~iwd~~~~ 135 (945)
++.+++.|+. ...+.+||+.+ ......+.... .....+. -++.+++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF--IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE--ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE--ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5566666654 35688888763 11122222211 1112222 26677777765 2 36889999876
Q ss_pred eEEEE--Ee-cCCCCEEEEEEccCCCEEEEEeCC---------------------------------------CcEEEEE
Q 002266 136 SIARV--LK-GHKGPVTGLAFDPNSEYLASIDSI---------------------------------------GTVIYWE 173 (945)
Q Consensus 136 ~~~~~--l~-~h~~~V~~lafspdg~~Las~s~D---------------------------------------g~I~iwD 173 (945)
+-... +. .......++. .++++++.|+.+ ..+.+||
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 53322 11 1111222222 467777888754 4688999
Q ss_pred ccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC------CCeEEEEEC--CC--CcEEEeecCCCCCCeEEE
Q 002266 174 LQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL------KNDVVMYDR--DT--AEKLFSLRGDHVQPICFL 243 (945)
Q Consensus 174 l~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~------dg~I~vwD~--~t--~~~~~~~~~~h~~~I~~l 243 (945)
+.+.+-...-.. +.. ...-.+++.. +++.+++|+. ...+.+||+ .+ |..+..+.. ........
T Consensus 175 ~~~~~W~~~~~~--p~~---~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~-~~~~~~~~ 247 (357)
T 2uvk_A 175 PSTQQWSYAGES--PWY---GTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS-PDGVAGGF 247 (357)
T ss_dssp TTTTEEEEEEEC--SSC---CCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST-TTCCBSCE
T ss_pred CCCCcEEECCCC--CCC---CcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC-Ccccccce
Confidence 887653332111 110 0110122222 5667777664 346778876 33 333222211 11111111
Q ss_pred EEcCCCCEEEEEECC----------------------CeEEEEECCCCeeeeeccCCC-CeeEEEEecCCCEEEEEEcCC
Q 002266 244 SWSPNGKYMATSSLD----------------------RQILIWDVGKKLDIDRQKFDD-RICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 244 ~fSpdg~~Lasgs~D----------------------g~I~IWD~~~~~~i~~~~~~~-~V~~la~spdg~~Las~s~DG 300 (945)
+...++++++.|+.+ ..+.+||+.+.+-........ .....+...+++.++.|+.++
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECG
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCC
Confidence 223366777777632 257889987754433322111 111222334667777777553
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.41 E-value=1.1 Score=48.98 Aligned_cols=193 Identities=12% Similarity=0.054 Sum_probs=97.7
Q ss_pred EEEEEEcCCCeEEEEcCCCCcccccccccc-ccceEEEEEe--c-CCCEEEEE-EcCCcEEEEEcCCCeeeeeccc----
Q 002266 31 HLVTASSSETTISIHDPLLPSNLPKILRHH-RDGVTALALS--P-NSTCLASG-SIDHSVKLYKFPGGEFQTNITR---- 101 (945)
Q Consensus 31 ~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h-~~~V~~la~s--p-dg~~Lasg-s~Dg~V~iwdl~~g~~~~~l~~---- 101 (945)
.+++++ .||.|.-.|..++.... .+... ..++....-. + ++..++.. +.||.|..++..+|.....+..
T Consensus 12 ~V~v~t-~dG~l~Ald~~tG~~~W-~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 12 ILIAAD-VEGGLHAVDRRNGHIIW-SIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEE-TTSCEEEEETTTTEEEE-EECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred EEEEEe-CCCeEEEEECCCCcEEE-EecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 344444 78888888877764322 22221 1222221100 1 22333333 5789999999887754332221
Q ss_pred CCCCEEE---EEE-----ecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCC--CC-----EEEEEEc-----cCCCEEE
Q 002266 102 FTLPIRV---LAF-----NKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHK--GP-----VTGLAFD-----PNSEYLA 161 (945)
Q Consensus 102 ~~~~V~~---l~f-----spdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~--~~-----V~~lafs-----pdg~~La 161 (945)
...++.. ..+ ...+..+++|+.+|.+...|+.+|+.+..+.... .. ..|.... -.+..|+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 1223321 000 0145678999999999999999999998886421 11 1111111 1234566
Q ss_pred EEeCCCcEEEEEccCCeeeeeecc--cCCCCCCCCCCc-eEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Q 002266 162 SIDSIGTVIYWELQSGRELHNLKR--VAPDIGSDPSSM-NVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLF 230 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t~~~i~~~~~--~~~~~~~~~~~i-~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~ 230 (945)
.+..+..+.+.+ ++|+ +..+.. ..... . ...+ .....+.++.+ ++++.+|.|..+|..++..+.
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~-~-~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNV-L-DVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCT-T-THHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EecceEEEEEEC-CCCC-eEEEecccccccc-c-ccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 666666666655 3442 221110 00000 0 0000 00001234666 446789999999999988776
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.31 E-value=1 Score=54.53 Aligned_cols=198 Identities=7% Similarity=0.042 Sum_probs=106.1
Q ss_pred cCCCEEEEEEcC----CcEEEEEcCCCeeeeec-c------cCCCCEEEEEEec-CCCEEEEEECCC------cEEEEEc
Q 002266 71 PNSTCLASGSID----HSVKLYKFPGGEFQTNI-T------RFTLPIRVLAFNK-SGSMLAAAGDDE------GIKLINT 132 (945)
Q Consensus 71 pdg~~Lasgs~D----g~V~iwdl~~g~~~~~l-~------~~~~~V~~l~fsp-dg~~Lasgs~Dg------~I~iwd~ 132 (945)
.++.+++.|+.+ ..+.+||..+++-...- . .....-.+++... ++..++.||.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777777753 46889998776533221 1 0111112233333 777888887543 4788998
Q ss_pred CCCeEEEE--EecCCCCEEEEEEccCCCEEEEEeCCC--cEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC-CC
Q 002266 133 IDGSIARV--LKGHKGPVTGLAFDPNSEYLASIDSIG--TVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD-GE 207 (945)
Q Consensus 133 ~~~~~~~~--l~~h~~~V~~lafspdg~~Las~s~Dg--~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd-g~ 207 (945)
.+.+-... +...... .+++...++.+++.|+.++ .+.+||+.+..-...-.. ............+.+..+ ++
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~--g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPK--DEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCS--SGGGGSCCBSCEEEEETTTTE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCC--CCCCCcccceeEEEEeCCCCE
Confidence 87643322 1111111 2233324788888887655 689999988653222110 000011112233555655 67
Q ss_pred EEEEEeC--C-----CeEEEEECCCCc--------EEEeecCCCCCCeEEEEEcCCCCEEEEEEC--------CCeEEEE
Q 002266 208 TLAVPGL--K-----NDVVMYDRDTAE--------KLFSLRGDHVQPICFLSWSPNGKYMATSSL--------DRQILIW 264 (945)
Q Consensus 208 ~La~gs~--d-----g~I~vwD~~t~~--------~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~--------Dg~I~IW 264 (945)
.++.|+. + +.+.+||+.+.. .+............ ++...++++++.|+. ...|.+|
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 7777765 2 468999987655 22221110111122 223333777777774 3469999
Q ss_pred ECCCCeee
Q 002266 265 DVGKKLDI 272 (945)
Q Consensus 265 D~~~~~~i 272 (945)
|+.+....
T Consensus 632 d~~t~~W~ 639 (695)
T 2zwa_A 632 DPLSETLT 639 (695)
T ss_dssp ETTTTEEE
T ss_pred ECCCCeEE
Confidence 99887654
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.86 E-value=2.4 Score=51.11 Aligned_cols=196 Identities=14% Similarity=0.101 Sum_probs=102.5
Q ss_pred CCCCEEEEEEc---CCCeEEEEcCCCCcccccc-------ccccccceEEEEEec-CCCEEEEEEcC------CcEEEEE
Q 002266 27 QQAHHLVTASS---SETTISIHDPLLPSNLPKI-------LRHHRDGVTALALSP-NSTCLASGSID------HSVKLYK 89 (945)
Q Consensus 27 pdg~~L~t~g~---~dg~V~IWd~~~~~~~~~~-------l~~h~~~V~~la~sp-dg~~Lasgs~D------g~V~iwd 89 (945)
.++..++.||. .-..+.+||..+..-.... +...... .+++..+ ++.+++.|+.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 45666666652 1246788887665311111 0111111 2333333 67777887754 3588899
Q ss_pred cCCCeeeeecccCCCC--EEEEEEecCCCEEEEEECCC--cEEEEEcCCCeEEEEE-----ecCCCCEEEEEEccC-CCE
Q 002266 90 FPGGEFQTNITRFTLP--IRVLAFNKSGSMLAAAGDDE--GIKLINTIDGSIARVL-----KGHKGPVTGLAFDPN-SEY 159 (945)
Q Consensus 90 l~~g~~~~~l~~~~~~--V~~l~fspdg~~Lasgs~Dg--~I~iwd~~~~~~~~~l-----~~h~~~V~~lafspd-g~~ 159 (945)
..+..-.. +.....+ -.+++...++.+++.|+.++ .+.+||+.+..-...- .........+.+..+ +.+
T Consensus 475 ~~t~~W~~-~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 475 MKTREWSM-IKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTTEEEE-CCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCCcEEE-CCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 87754322 1111111 11223324788888887655 6899999887543221 111222233555655 667
Q ss_pred EEEEeC--C-----CcEEEEEccCCee-----eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC--------CCeEE
Q 002266 160 LASIDS--I-----GTVIYWELQSGRE-----LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL--------KNDVV 219 (945)
Q Consensus 160 Las~s~--D-----g~I~iwDl~t~~~-----i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~--------dg~I~ 219 (945)
++.|+. + ..+.+||+.+..- ...+... +.. . .. -..++...+++.+++|+. ...|.
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~-p~~-~-R~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH-PLF-Q-RY-GSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC-GGG-C-CB-SCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC-CCC-C-cc-cceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 777765 2 3588999988761 1222111 000 0 01 112333334777888774 34699
Q ss_pred EEECCCCcE
Q 002266 220 MYDRDTAEK 228 (945)
Q Consensus 220 vwD~~t~~~ 228 (945)
+||+.+.+-
T Consensus 630 ~yd~~t~~W 638 (695)
T 2zwa_A 630 SLDPLSETL 638 (695)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCeE
Confidence 999987653
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.67 E-value=17 Score=41.39 Aligned_cols=106 Identities=18% Similarity=0.183 Sum_probs=60.8
Q ss_pred CCEEEEEECCCCC-EEEEEEcCCCeEEEEcCCCCc--cc----cccccc-----cccceEEEEEecC----CCEEEEEEc
Q 002266 18 ASFCSILWDQQAH-HLVTASSSETTISIHDPLLPS--NL----PKILRH-----HRDGVTALALSPN----STCLASGSI 81 (945)
Q Consensus 18 ~~V~svafspdg~-~L~t~g~~dg~V~IWd~~~~~--~~----~~~l~~-----h~~~V~~la~spd----g~~Lasgs~ 81 (945)
..-+.|+|.|+|+ .|+++- ..|.|++++..... .. ...+.. .......|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~e-r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILE-KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEE-TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEe-CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3467899999996 444443 78999999753221 11 111111 1457889999996 444444332
Q ss_pred C------------CcEEEEEcCCC----------eeeeecc--cCCCCEEEEEEecCCCEEEEEECC
Q 002266 82 D------------HSVKLYKFPGG----------EFQTNIT--RFTLPIRVLAFNKSGSMLAAAGDD 124 (945)
Q Consensus 82 D------------g~V~iwdl~~g----------~~~~~l~--~~~~~V~~l~fspdg~~Lasgs~D 124 (945)
+ ..|.-|.+..+ +.+..+. ........|+|.|||.+.++.++.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 14555665421 1121111 123456889999999887776654
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.17 E-value=6.1 Score=41.73 Aligned_cols=222 Identities=15% Similarity=0.072 Sum_probs=114.0
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEE
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVL 141 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l 141 (945)
..|..|+.... ..++. . ||.|+.|-......+..-......|..++.... ..++. . ||.|+.|-......+..-
T Consensus 24 ~~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 24 SGVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SSCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 46777776543 23333 5 899999976542212111112335666766543 33344 4 899999976542211111
Q ss_pred ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEE
Q 002266 142 KGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMY 221 (945)
Q Consensus 142 ~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vw 221 (945)
..-...|..++..... .+.-. +|.|+.|-......+.. +. .....+..++... .+.++-. +|.|+.|
T Consensus 98 ~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~-----~~--~~~~~i~~i~~G~--~~~~~l~-~G~v~~w 164 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTV-----PA--EAQSGVTALDGGV--YTALAVK-NGGVIAW 164 (282)
T ss_dssp GGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSC-----CG--GGGSSEEEEEECS--SEEEEEE-TTEEEEE
T ss_pred cccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCC-----Cc--cCCCCeEEEEccc--CEEEEEE-CCEEEEe
Confidence 1113467777766443 33334 89999997654322110 00 0112344454432 2333334 7889988
Q ss_pred ECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeee-ccCCCCeeEEEEecCCCEEEEEEcCC
Q 002266 222 DRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDR-QKFDDRICCMAWKPIGNALAVIDVMG 300 (945)
Q Consensus 222 D~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~-~~~~~~V~~la~spdg~~Las~s~DG 300 (945)
-......+. ++......|..++...+ +.+.- .||.|+.|-....-.+.. ......|..++-... ..++.. ||
T Consensus 165 G~n~~gqlg-~p~~~~~~v~~i~~G~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-h~~al~--~g 237 (282)
T 3qhy_B 165 GDNYFGQTT-VPAEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW-YSLALK--NG 237 (282)
T ss_dssp ECCTTSTTS-CCGGGGSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS-CEEEEE--TT
T ss_pred cCCCCCCCC-CceecCCCeEEEEecCC--EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC-EEEEEE--CC
Confidence 765422211 11112345777765443 33333 599999997654322221 122245677765433 234444 99
Q ss_pred eEEEEecCC
Q 002266 301 KYGVWESVV 309 (945)
Q Consensus 301 ~I~iWd~~~ 309 (945)
.|+.|=...
T Consensus 238 ~v~~wG~n~ 246 (282)
T 3qhy_B 238 KVIAWGSSR 246 (282)
T ss_dssp EEEEESTTC
T ss_pred EEEEecCCC
Confidence 999996543
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.57 E-value=22 Score=40.38 Aligned_cols=106 Identities=13% Similarity=0.017 Sum_probs=60.9
Q ss_pred cceEEEEEecCCC-EEEEEEcCCcEEEEEcCCCe---eeeecc----c-----CCCCEEEEEEecC----CCEEEEEECC
Q 002266 62 DGVTALALSPNST-CLASGSIDHSVKLYKFPGGE---FQTNIT----R-----FTLPIRVLAFNKS----GSMLAAAGDD 124 (945)
Q Consensus 62 ~~V~~la~spdg~-~Lasgs~Dg~V~iwdl~~g~---~~~~l~----~-----~~~~V~~l~fspd----g~~Lasgs~D 124 (945)
...+.|+|.|+|. .|+++...|.|++++..... .+..+. . .......|+|+|+ +.+.++-+..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4568999999996 45555788999999743221 111111 1 1356789999995 4333333321
Q ss_pred ------------CcEEEEEcCC----------CeEEEEEe--cCCCCEEEEEEccCCCEEEEEeCCC
Q 002266 125 ------------EGIKLINTID----------GSIARVLK--GHKGPVTGLAFDPNSEYLASIDSIG 167 (945)
Q Consensus 125 ------------g~I~iwd~~~----------~~~~~~l~--~h~~~V~~lafspdg~~Las~s~Dg 167 (945)
..|.-|.+.. .+.+..+. ........|+|.|||.++++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1344455532 12333332 1223468899999998777665443
No 352
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=90.23 E-value=13 Score=44.68 Aligned_cols=238 Identities=12% Similarity=0.001 Sum_probs=122.1
Q ss_pred EEEE-ECCCCCEEEEEEc----CCCeEEEEcCCCCccccccccc-ccc------ceEEEEEecCCCEEEEEE--------
Q 002266 21 CSIL-WDQQAHHLVTASS----SETTISIHDPLLPSNLPKILRH-HRD------GVTALALSPNSTCLASGS-------- 80 (945)
Q Consensus 21 ~sva-fspdg~~L~t~g~----~dg~V~IWd~~~~~~~~~~l~~-h~~------~V~~la~spdg~~Lasgs-------- 80 (945)
..+. ++|++++++.+-+ .-..++++|+.++..+...+.. -+. ....++|..+..++++..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3444 8999999887632 3347899999887544433331 011 113458874444444311
Q ss_pred --cCCcEEEEEcCCCee--eeecccCCCCE-EEEEEecCCCE-----EEEEECC---CcEEEEEcCC--CeEEEEEecCC
Q 002266 81 --IDHSVKLYKFPGGEF--QTNITRFTLPI-RVLAFNKSGSM-----LAAAGDD---EGIKLINTID--GSIARVLKGHK 145 (945)
Q Consensus 81 --~Dg~V~iwdl~~g~~--~~~l~~~~~~V-~~l~fspdg~~-----Lasgs~D---g~I~iwd~~~--~~~~~~l~~h~ 145 (945)
....|+.|.+.+... ...+......+ .....++++.+ +++.+.+ ..+.+.+... +. ...+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC
Confidence 125688888765421 12233222222 33445566652 4443322 3466666653 33 22332222
Q ss_pred CCEEEEEEccCCCEEEEE----------eCCCcEEEEEccCCe-------eeeeecccCCCCCCCCCCceEEEEcCCCCE
Q 002266 146 GPVTGLAFDPNSEYLASI----------DSIGTVIYWELQSGR-------ELHNLKRVAPDIGSDPSSMNVLSWSPDGET 208 (945)
Q Consensus 146 ~~V~~lafspdg~~Las~----------s~Dg~I~iwDl~t~~-------~i~~~~~~~~~~~~~~~~i~~l~~spdg~~ 208 (945)
.. .+..+.++.+++.. ...+.|.+.++.++. ....+-. + .....+..+.|..+ .+
T Consensus 291 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~l~~~~~~~~-~l 362 (711)
T 4hvt_A 291 DA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT--P---TANEVFNFISTTKD-RV 362 (711)
T ss_dssp TC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC--C---CTTEEEEEEEECSS-CE
T ss_pred cc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC--C---CCCCeEEEEEEECC-EE
Confidence 21 12344455555532 135678888887642 1111111 1 12345667888865 55
Q ss_pred EEEEeCCC--eEEEEECCCCc-EEEe-ecCCCCCCeEEEEEcCCCC-EEEEEEC---CCeEEEEECC
Q 002266 209 LAVPGLKN--DVVMYDRDTAE-KLFS-LRGDHVQPICFLSWSPNGK-YMATSSL---DRQILIWDVG 267 (945)
Q Consensus 209 La~gs~dg--~I~vwD~~t~~-~~~~-~~~~h~~~I~~l~fSpdg~-~Lasgs~---Dg~I~IWD~~ 267 (945)
+++...++ .|.++++.++. .... +.....+.+..+.+++++. ++++.+. -+.+..+|+.
T Consensus 363 ~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 363 FLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 66665565 46777776654 1222 2221234576677777765 4444432 3678888876
No 353
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=87.45 E-value=31 Score=36.18 Aligned_cols=163 Identities=14% Similarity=0.059 Sum_probs=97.0
Q ss_pred ccccccccCCCCCEEEEEECCCCCEEEEEEcCCCeEEEEc---CCCCccccccccccccceEEEEEec--CCCEEEEEEc
Q 002266 7 KLREAHKCGNAASFCSILWDQQAHHLVTASSSETTISIHD---PLLPSNLPKILRHHRDGVTALALSP--NSTCLASGSI 81 (945)
Q Consensus 7 ~~~~aH~~gh~~~V~svafspdg~~L~t~g~~dg~V~IWd---~~~~~~~~~~l~~h~~~V~~la~sp--dg~~Lasgs~ 81 (945)
+...+|.. ..+.|..+.-.....+|+... +.|.++--. +....... .+. ....|..+-. + +..+++..+.
T Consensus 14 r~~~g~~~-~gD~~~~~~~~~t~~~ll~fT-~~G~v~~~~~~~lp~~~~~~-ll~-~~e~i~~v~~-~~~~~~~~v~~T~ 88 (276)
T 3no0_A 14 IPVEELPL-EKAPVVNILRVPFTEGLFLVS-NRGRVYWIAGSQALQGSKVS-LKS-REEKIVGAFI-REKFGNRLLLATK 88 (276)
T ss_dssp EEGGGCCS-SCCCEEEEEEEETTSCEEEEE-TTSEEEEECSHHHHTSEECC-CSS-TTCCEEEEEE-GGGSCSEEEEEET
T ss_pred eeccCCCC-CCCeEEEEEEECCCCEEEEEc-CCCeEEEEEhhhCccCcccc-cCC-CCCEEEEEEC-CcCCCCEEEEEeC
Confidence 44556753 345666655544555555554 678776533 22111111 132 3456666644 4 4678999999
Q ss_pred CCcEEEEEcCCCe------eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCC---------CeEEEEEecCCC
Q 002266 82 DHSVKLYKFPGGE------FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID---------GSIARVLKGHKG 146 (945)
Q Consensus 82 Dg~V~iwdl~~g~------~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~---------~~~~~~l~~h~~ 146 (945)
+|.|+...+..-. ....+. ....+..+........++..+..|.+..+.... |.....+. ...
T Consensus 89 ~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d 166 (276)
T 3no0_A 89 KGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KND 166 (276)
T ss_dssp TSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTC
T ss_pred CCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCC
Confidence 9999999875421 111122 234566665555667888999999988887532 11211232 235
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEEccC
Q 002266 147 PVTGLAFDPNSEYLASIDSIGTVIYWELQS 176 (945)
Q Consensus 147 ~V~~lafspdg~~Las~s~Dg~I~iwDl~t 176 (945)
.|..+...+++..++..+..|.++...+..
T Consensus 167 ~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 167 ETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred EEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 666666556667888889999998888754
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.10 E-value=39 Score=36.95 Aligned_cols=195 Identities=10% Similarity=-0.008 Sum_probs=90.8
Q ss_pred ceEEEEEec-C-CCEEEEEEcCCcEEEEEcCCCeeeeeccc-------------------CCCCEEEEEEecC-CCEEEE
Q 002266 63 GVTALALSP-N-STCLASGSIDHSVKLYKFPGGEFQTNITR-------------------FTLPIRVLAFNKS-GSMLAA 120 (945)
Q Consensus 63 ~V~~la~sp-d-g~~Lasgs~Dg~V~iwdl~~g~~~~~l~~-------------------~~~~V~~l~fspd-g~~Las 120 (945)
.|.+|++.| + ...|..++..+-|...+ ..|+....+.. ....+.+|.+.|. ...|.+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 578899987 2 45566666566554443 23332222211 1235788999873 345555
Q ss_pred EECCCcEEEEEcCCCeEEEEEecC-------------CCCEEEEEEccC-CCEEEEEeCCCcEEEEEccCCeeeeeeccc
Q 002266 121 AGDDEGIKLINTIDGSIARVLKGH-------------KGPVTGLAFDPN-SEYLASIDSIGTVIYWELQSGRELHNLKRV 186 (945)
Q Consensus 121 gs~Dg~I~iwd~~~~~~~~~l~~h-------------~~~V~~lafspd-g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~ 186 (945)
+..++.|...+ ..++.-..+... ...+.+|+++|. ...|+++...+ |...+ ..+..-..+...
T Consensus 195 g~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~~ 271 (394)
T 3b7f_A 195 GMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGDA 271 (394)
T ss_dssp EEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGGG
T ss_pred EECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCCC
Confidence 55444443332 222222222110 124889999986 35666665544 44433 223332222211
Q ss_pred CCCCCCCCCCceEEEEcC-CCCEEEEEeC-----------CCeEEEEECCC----CcEEEe-ecCCCC---CCeEEEEEc
Q 002266 187 APDIGSDPSSMNVLSWSP-DGETLAVPGL-----------KNDVVMYDRDT----AEKLFS-LRGDHV---QPICFLSWS 246 (945)
Q Consensus 187 ~~~~~~~~~~i~~l~~sp-dg~~La~gs~-----------dg~I~vwD~~t----~~~~~~-~~~~h~---~~I~~l~fS 246 (945)
.+. .....+..++++| +...|++++. ++...+|.... ++.+.. +..... .....++++
T Consensus 272 l~~--~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~ 349 (394)
T 3b7f_A 272 MPR--EVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTAD 349 (394)
T ss_dssp SCT--TTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEEC
T ss_pred CCC--CCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEEC
Confidence 110 0012345788887 3444555432 23344554433 333321 111000 012357888
Q ss_pred CC-CCEEEEEECCCeEEE
Q 002266 247 PN-GKYMATSSLDRQILI 263 (945)
Q Consensus 247 pd-g~~Lasgs~Dg~I~I 263 (945)
|. +..|+.++.++.|..
T Consensus 350 p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 350 AHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp CSSSCCEEEECTTSCEEE
T ss_pred CCCCCEEEEEeCCCeEEE
Confidence 74 445666665555543
No 355
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=84.26 E-value=43 Score=34.99 Aligned_cols=240 Identities=13% Similarity=0.085 Sum_probs=121.1
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcCCCeeee
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFPGGEFQT 97 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g~~~~ 97 (945)
..|..|+... .+.++. . ||.|+.|-.....++.... .....|..++....- .++. . ||.|+.|-......+.
T Consensus 24 ~~i~~ia~G~--~h~~~l-~-~G~v~~wG~n~~Gqlg~p~-~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGGY--FHGLAL-K-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEECS--SEEEEE-E-TTEEEEEECCSSSTTSCCG-GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCCcEEEeCC--CeEEEE-E-CCEEEEEeCCCCCCCCCCc-cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCC
Confidence 3466666543 333333 3 8899999755433322111 123467777765442 3333 4 8999999765422122
Q ss_pred ecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCC
Q 002266 98 NITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG 177 (945)
Q Consensus 98 ~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~ 177 (945)
.-......|..++.... ..++-. +|.|+.|-......+.........|..++..... .+.-. ||.|+.|-....
T Consensus 96 ~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTT
T ss_pred CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCC
Confidence 11122346777776643 333344 9999999765422111111223557777665433 22233 799999976543
Q ss_pred eeeeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEEC
Q 002266 178 RELHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSSL 257 (945)
Q Consensus 178 ~~i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~ 257 (945)
..+.. +.. ....+..++.... ..++. .+|.|+.|=......+- ++......|..++.... +.++-+
T Consensus 170 gqlg~-----p~~--~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~--h~~al~- 235 (282)
T 3qhy_B 170 GQTTV-----PAE--AQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGEW--YSLALK- 235 (282)
T ss_dssp STTSC-----CGG--GGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECSS--CEEEEE-
T ss_pred CCCCC-----cee--cCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCCC--EEEEEE-
Confidence 22110 000 0133555554332 23333 58999999765432211 11112245666665443 333333
Q ss_pred CCeEEEEECCCCeeeeeccCCCCeeEEEEec
Q 002266 258 DRQILIWDVGKKLDIDRQKFDDRICCMAWKP 288 (945)
Q Consensus 258 Dg~I~IWD~~~~~~i~~~~~~~~V~~la~sp 288 (945)
||.|+.|-......+.. ...|.+++-..
T Consensus 236 ~g~v~~wG~n~~gq~~v---~~~v~~iaaG~ 263 (282)
T 3qhy_B 236 NGKVIAWGSSRTAPSSV---QSGVSSIEAGP 263 (282)
T ss_dssp TTEEEEESTTCCCCGGG---SSCEEEEEECS
T ss_pred CCEEEEecCCCCccccC---CCCcEEEEECc
Confidence 99999997655433222 33455555443
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=83.58 E-value=88 Score=37.97 Aligned_cols=151 Identities=13% Similarity=0.130 Sum_probs=77.7
Q ss_pred ccceEEEEEecC-CCEEEEEEcCCcEEEEEcCCCeeeeecccC-------CCCEEEEEEecC-CCEEEEEECCCc----E
Q 002266 61 RDGVTALALSPN-STCLASGSIDHSVKLYKFPGGEFQTNITRF-------TLPIRVLAFNKS-GSMLAAAGDDEG----I 127 (945)
Q Consensus 61 ~~~V~~la~spd-g~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~-------~~~V~~l~fspd-g~~Lasgs~Dg~----I 127 (945)
...|.+|+++|. ...+++++..+.|...+ ..|+.-..+... ...+.+|++.|. ...++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999995 45667777777666554 344444333321 246999999984 344555443311 3
Q ss_pred EEEEcC-CCeEEEEEecC-------C--CCEEEEEEccC-CCEEEEEeCCCcEEEEEcc-CCeeeeeecccCCCCCCCCC
Q 002266 128 KLINTI-DGSIARVLKGH-------K--GPVTGLAFDPN-SEYLASIDSIGTVIYWELQ-SGRELHNLKRVAPDIGSDPS 195 (945)
Q Consensus 128 ~iwd~~-~~~~~~~l~~h-------~--~~V~~lafspd-g~~Las~s~Dg~I~iwDl~-t~~~i~~~~~~~~~~~~~~~ 195 (945)
.||-.. .|+.-..+... . ..+..++++|. ...++.+...+. ||-.. .|+.-..+... +.......
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~-~~~~~~~~ 169 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSI-PDAFTNGI 169 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTS-CCCCSTTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccC-ccccCCCC
Confidence 344333 34322222210 1 13567888884 345666553443 33332 23332222211 11101124
Q ss_pred CceEEEEcC-CCCEEEEEeCC
Q 002266 196 SMNVLSWSP-DGETLAVPGLK 215 (945)
Q Consensus 196 ~i~~l~~sp-dg~~La~gs~d 215 (945)
.+..+.++| ++..++++..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 567889998 45566666554
No 357
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=83.20 E-value=58 Score=35.65 Aligned_cols=236 Identities=10% Similarity=-0.008 Sum_probs=133.5
Q ss_pred ecCCCEEEEEEcCCcEEEEEcCC---------CeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC---C---
Q 002266 70 SPNSTCLASGSIDHSVKLYKFPG---------GEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI---D--- 134 (945)
Q Consensus 70 spdg~~Lasgs~Dg~V~iwdl~~---------g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~---~--- 134 (945)
-|+..++++.+.+|.|+--.+.. |.....+ .....+..+........|+..+..|.++.+... .
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~l-ke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAST-KEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEEC-SCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceeccc-CCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 46777899999999999876532 1111122 234556666666666778888888887666532 1
Q ss_pred ---CeEEE---EEecCCCCEEEEEEcc---CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCC
Q 002266 135 ---GSIAR---VLKGHKGPVTGLAFDP---NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPD 205 (945)
Q Consensus 135 ---~~~~~---~l~~h~~~V~~lafsp---dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spd 205 (945)
|..+. .+. ....|.++..-. .+.+|+.++..|.++...+..-.....-......+.. ...+..+.....
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 22111 122 235565554432 4568999999999999887543221100000011111 233444444445
Q ss_pred CCEEEEEeCCCeEEEEECCCCc-------EEEeecCCCCCCeEEEEEcC-------------------------------
Q 002266 206 GETLAVPGLKNDVVMYDRDTAE-------KLFSLRGDHVQPICFLSWSP------------------------------- 247 (945)
Q Consensus 206 g~~La~gs~dg~I~vwD~~t~~-------~~~~~~~~h~~~I~~l~fSp------------------------------- 247 (945)
...|+..+..|.+..|....-. -+.-+.-.....|.++...+
T Consensus 161 ~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~ 240 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 240 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------
T ss_pred CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccc
Confidence 5577777889988888754211 11112111234555555443
Q ss_pred ----CCCEEEEEECCCeEEEEECCCCeee-------eecc---CCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 248 ----NGKYMATSSLDRQILIWDVGKKLDI-------DRQK---FDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 248 ----dg~~Lasgs~Dg~I~IWD~~~~~~i-------~~~~---~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.+.+|++.+..|..+...+..-... ..+. -.+.+..+.+..+...|...+..|.+.-..+.
T Consensus 241 ~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 241 ADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp ------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred ccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 4568999999999998887432221 1111 23456666555555678788888887777654
No 358
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=73.75 E-value=97 Score=32.88 Aligned_cols=235 Identities=8% Similarity=0.017 Sum_probs=129.5
Q ss_pred cCCCEEEEEEcCCcEEEEEcCCCeeee-------ecc-cCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCC---C----
Q 002266 71 PNSTCLASGSIDHSVKLYKFPGGEFQT-------NIT-RFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID---G---- 135 (945)
Q Consensus 71 pdg~~Lasgs~Dg~V~iwdl~~g~~~~-------~l~-~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~---~---- 135 (945)
++..++++.+.+|.|+-..+..-.... .+. .....+..+........++..+..|.++-+.... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 456678889999999988764332111 111 2234455555555667788888999877766532 1
Q ss_pred --eE---EEEEecCCCCEEEEEEcc---CCCEEEEEeCCCcEEEEEccCCeeeeeecccCCCCCCCCCCceEEEEcCCCC
Q 002266 136 --SI---ARVLKGHKGPVTGLAFDP---NSEYLASIDSIGTVIYWELQSGRELHNLKRVAPDIGSDPSSMNVLSWSPDGE 207 (945)
Q Consensus 136 --~~---~~~l~~h~~~V~~lafsp---dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~~~~~~~~i~~l~~spdg~ 207 (945)
.. ...+. ....|..+...+ +..+|+..+..|.++...+..-............... ...+..+.....+.
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 00 00122 224455554333 4567888899999998887543211100000011112 34444444444456
Q ss_pred EEEEEeCCCeEEEEECCCC-------cEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeee--------
Q 002266 208 TLAVPGLKNDVVMYDRDTA-------EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI-------- 272 (945)
Q Consensus 208 ~La~gs~dg~I~vwD~~t~-------~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i-------- 272 (945)
.++..+.+|.+..+....- .-+..+.-.....|..+..-.++..|++.+..|..+...+..-...
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kGv~ 243 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGYT 243 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccCCCCCCEE
Confidence 7888889999999886531 1122222113455666666556677888899999999987432211
Q ss_pred -eecc--CCCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 273 -DRQK--FDDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 273 -~~~~--~~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
.... -...+.++........|...+..|.+.-...
T Consensus 244 ~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~ 281 (312)
T 1suu_A 244 SYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVA 281 (312)
T ss_dssp CSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEG
T ss_pred eeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 1111 1234544433345556777788886554443
No 359
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=72.90 E-value=1e+02 Score=32.86 Aligned_cols=235 Identities=7% Similarity=-0.018 Sum_probs=129.1
Q ss_pred cCCCEEEEEEcCCcEEEEEcCCCe----eeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCC---------CeE
Q 002266 71 PNSTCLASGSIDHSVKLYKFPGGE----FQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTID---------GSI 137 (945)
Q Consensus 71 pdg~~Lasgs~Dg~V~iwdl~~g~----~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~---------~~~ 137 (945)
|+..++++.+.+|.|+--.+..-+ ....+ .....+..+........|+..+..|.++-+.... |..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~l-ke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAM-KDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCC-CTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCcccccc-CCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 456678888999999887654211 00112 2234555555555667888888889876665421 221
Q ss_pred EE---EEecCCCCEEEEE-Ecc--CCCEEEEEeCCCcEEEEEccCCeeeeeeccc-CCCCCCCCCCceEEEEcCCCCEEE
Q 002266 138 AR---VLKGHKGPVTGLA-FDP--NSEYLASIDSIGTVIYWELQSGRELHNLKRV-APDIGSDPSSMNVLSWSPDGETLA 210 (945)
Q Consensus 138 ~~---~l~~h~~~V~~la-fsp--dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~-~~~~~~~~~~i~~l~~spdg~~La 210 (945)
+. .+. ....|.++. ... ++.+|+.++.+|.++...+..-.....-... ...... ...+..+........|+
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF 159 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE
Confidence 11 122 234455543 332 2568889999999999887543221100000 001111 23444444444556777
Q ss_pred EEeCCCeEEEEECCCCc-------EEEeecCCCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCee-------eeec
Q 002266 211 VPGLKNDVVMYDRDTAE-------KLFSLRGDHVQPICFLSWSPNGK-YMATSSLDRQILIWDVGKKLD-------IDRQ 275 (945)
Q Consensus 211 ~gs~dg~I~vwD~~t~~-------~~~~~~~~h~~~I~~l~fSpdg~-~Lasgs~Dg~I~IWD~~~~~~-------i~~~ 275 (945)
..+.+|.+..+....-. -+.-+.-.....|.++..-+.+. .|++.+..|..+..++..-.. +...
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~ 239 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVIL 239 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECS
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECe
Confidence 88889998888764311 12222222334566665444445 788888899888877743111 1111
Q ss_pred ----cCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 276 ----KFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 276 ----~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.....+..+.....+..++..+..|.+....+.
T Consensus 240 ~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 240 RELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp CCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred eecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 112245544333344567788888887766654
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=70.51 E-value=1.2e+02 Score=32.50 Aligned_cols=235 Identities=12% Similarity=0.038 Sum_probs=127.3
Q ss_pred CEEEEEEcCCCeEEEEcCCCC--------ccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEE---cCC------
Q 002266 30 HHLVTASSSETTISIHDPLLP--------SNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYK---FPG------ 92 (945)
Q Consensus 30 ~~L~t~g~~dg~V~IWd~~~~--------~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwd---l~~------ 92 (945)
..+++.+ .+|.|+--.+.+- ......+. ..+.+..+........|+.-+..|.++... ++.
T Consensus 4 ~v~v~ls-~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 4 DVVVTIT-ETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp EEEEEEE-TTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred cEEEEEe-CCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 3455554 7888876542110 00011112 234555555555556677667788776554 332
Q ss_pred Ceeeeeccc--CCCCEEEEEEec---CCCEEEEEECCCcEEEEEcCCC-------eEEEEEecCCCCEEEEEEccCCCEE
Q 002266 93 GEFQTNITR--FTLPIRVLAFNK---SGSMLAAAGDDEGIKLINTIDG-------SIARVLKGHKGPVTGLAFDPNSEYL 160 (945)
Q Consensus 93 g~~~~~l~~--~~~~V~~l~fsp---dg~~Lasgs~Dg~I~iwd~~~~-------~~~~~l~~h~~~V~~lafspdg~~L 160 (945)
|..+..+.. ....|..+...+ +..+++.++..|.|+...+... .....+.. .+.+..+........|
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~i 160 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDL 160 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEE
Confidence 222222211 234555554433 5789999999999999887542 22222333 3556656555556678
Q ss_pred EEEeCCCcEEEEEcc--CCeeeee-ecccC-CCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEE
Q 002266 161 ASIDSIGTVIYWELQ--SGRELHN-LKRVA-PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA-------EKL 229 (945)
Q Consensus 161 as~s~Dg~I~iwDl~--t~~~i~~-~~~~~-~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~-------~~~ 229 (945)
+..+..|.+..+... .-..... -.+.. -.+ .....|..+...+.+.+|++.+..|.++...+... +-+
T Consensus 161 ll~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~ 239 (327)
T 3uc1_A 161 LLVSANGQSIRFSATDEALRPMGRATSGVQGMRF-NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGV 239 (327)
T ss_dssp EEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC-CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred EEEECCCeEEEEECcccccCcCCcCCCCeeeecC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcE
Confidence 888889988888776 2111100 00000 011 12344555555556678888899999988875432 222
Q ss_pred EeecCC-CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 230 FSLRGD-HVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 230 ~~~~~~-h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
..+.-. ....+..+....+...++..+.+|.+.-++...
T Consensus 240 ~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 240 LTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp ESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 222211 123455554444455677777788888887644
No 361
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=68.23 E-value=1.4e+02 Score=32.46 Aligned_cols=236 Identities=11% Similarity=0.083 Sum_probs=122.4
Q ss_pred ceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-e----------eeeeccc-CCCCEEEEEEecCCCEEEEEECCCcEEEE
Q 002266 63 GVTALALSPNSTCLASGSIDHSVKLYKFPGG-E----------FQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIKLI 130 (945)
Q Consensus 63 ~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g-~----------~~~~l~~-~~~~V~~l~fspdg~~Lasgs~Dg~I~iw 130 (945)
.|..|+.. ....+.-..||.|+.|-.... + ....+.. ....+..++++.-....++-..+|.|+.|
T Consensus 54 ~i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w 131 (389)
T 3kci_A 54 RPVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 131 (389)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred ceEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence 34445433 345555578899999964321 1 1111221 22345666777666777777889999999
Q ss_pred EcCCC-----------eEEEEEecC-CCCEEEEEEccCCCEEEEEeCCCcEEEEEccCC-e-----ee-eeecccCCCCC
Q 002266 131 NTIDG-----------SIARVLKGH-KGPVTGLAFDPNSEYLASIDSIGTVIYWELQSG-R-----EL-HNLKRVAPDIG 191 (945)
Q Consensus 131 d~~~~-----------~~~~~l~~h-~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~-~-----~i-~~~~~~~~~~~ 191 (945)
-.... .....+... ...|..|+.. ..+.++...+|.|+.|-.... + .. .........
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~-- 207 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-- 207 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGG--
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecc--
Confidence 64321 011112211 2357666654 345556677899999975331 1 00 000000000
Q ss_pred CCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------cEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCe
Q 002266 192 SDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA-----------EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQ 260 (945)
Q Consensus 192 ~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~-----------~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~ 260 (945)
.....+..++......+.++-..+|.|+.|-.... .....+.......|..++.. ..+.++-..+|.
T Consensus 208 ~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~ 285 (389)
T 3kci_A 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGA 285 (389)
T ss_dssp GTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSC
T ss_pred cCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCe
Confidence 11233555555433345556677899999964321 11122221122345555543 345555678999
Q ss_pred EEEEECCCCe------------eeeeccC-CCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 261 ILIWDVGKKL------------DIDRQKF-DDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 261 I~IWD~~~~~------------~i~~~~~-~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
|+.|-....- +...... ...|..++.. ....++...||.|+.|=..
T Consensus 286 v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp EEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECC
T ss_pred EEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCC
Confidence 9999753311 1111111 2345555543 3456666899999999643
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=67.12 E-value=1.5e+02 Score=32.44 Aligned_cols=143 Identities=8% Similarity=0.039 Sum_probs=86.0
Q ss_pred cEEEEEcCCC--eEEEEEec------CCCCEEEEEEc---cC----CCEEEEEe-CCCcEEEEEccCCeeeeeecccC-C
Q 002266 126 GIKLINTIDG--SIARVLKG------HKGPVTGLAFD---PN----SEYLASID-SIGTVIYWELQSGRELHNLKRVA-P 188 (945)
Q Consensus 126 ~I~iwd~~~~--~~~~~l~~------h~~~V~~lafs---pd----g~~Las~s-~Dg~I~iwDl~t~~~i~~~~~~~-~ 188 (945)
.|.+||+.+. +.++++.- ....+..++++ |. +.++..+. ..+.|.|+|+.+++..+...... +
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778888888 77777642 13467888888 22 34544444 46789999999987665542111 1
Q ss_pred CCC------C----CCCCceEEEEcCC----CCEEEEEeCCC-eEEEEE---CCCC---cEEEeecC-CCCCCeEEEEEc
Q 002266 189 DIG------S----DPSSMNVLSWSPD----GETLAVPGLKN-DVVMYD---RDTA---EKLFSLRG-DHVQPICFLSWS 246 (945)
Q Consensus 189 ~~~------~----~~~~i~~l~~spd----g~~La~gs~dg-~I~vwD---~~t~---~~~~~~~~-~h~~~I~~l~fS 246 (945)
... + -...+..++++|+ ++.|......+ .++-.. ++.. ..+..+-. .....-..+++.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 100 0 0246788999997 77887766554 344333 1111 11111111 011334456775
Q ss_pred -CCCCEEEEEECCCeEEEEECCC
Q 002266 247 -PNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 247 -pdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
.+|.++++--....|..|+..+
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEeccCCeEEEEeCCC
Confidence 6788777777888999999876
No 363
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=66.25 E-value=1.4e+02 Score=31.60 Aligned_cols=234 Identities=11% Similarity=-0.002 Sum_probs=128.2
Q ss_pred CCCEEEEEEcCCcEEEEEcCCCeeeee-------c-ccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcC---C------
Q 002266 72 NSTCLASGSIDHSVKLYKFPGGEFQTN-------I-TRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTI---D------ 134 (945)
Q Consensus 72 dg~~Lasgs~Dg~V~iwdl~~g~~~~~-------l-~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~---~------ 134 (945)
+..++++.+.+|.|+--.+.+-+.... + ......+..+........|+..+..|.++-+... .
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 455788889999998877654221110 0 1123345555555566778888888887666542 2
Q ss_pred CeEEE---EEecCCCCEEEEEEc---cCCCEEEEEeCCCcEEEEEccCCeeeeeecc-cCCCCCCCCCCceEEEEcCCCC
Q 002266 135 GSIAR---VLKGHKGPVTGLAFD---PNSEYLASIDSIGTVIYWELQSGRELHNLKR-VAPDIGSDPSSMNVLSWSPDGE 207 (945)
Q Consensus 135 ~~~~~---~l~~h~~~V~~lafs---pdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~-~~~~~~~~~~~i~~l~~spdg~ 207 (945)
|..+. .+. ....|.++..- .++.+++..+..|.++...+..-..... .. .......+ ..+..+.......
T Consensus 82 G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r-~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 82 GRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT-AGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT-TCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc-CCeEEEEECCC-CEEEEEEEeCCCC
Confidence 22111 122 33456655432 3456788899999999988753211111 00 00111112 3444444444455
Q ss_pred EEEEEeCCCeEEEEECCCCc-------EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCee---------
Q 002266 208 TLAVPGLKNDVVMYDRDTAE-------KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLD--------- 271 (945)
Q Consensus 208 ~La~gs~dg~I~vwD~~t~~-------~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~--------- 271 (945)
.++..+..|.+..+....-. -+.-+.-.....|.++....++..|++.+..|.++-.++..-..
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~ 238 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVI 238 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEE
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEE
Confidence 67777889998888764211 11112212345666666555566788889999998887632111
Q ss_pred eeecc-CCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 272 IDRQK-FDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 272 i~~~~-~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
..... -.+.+..+....+...|+..+.+|.+..+...
T Consensus 239 ~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 239 SIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGG
T ss_pred eeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecc
Confidence 11111 12456555554455677888888887777654
No 364
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=66.19 E-value=1.5e+02 Score=32.04 Aligned_cols=188 Identities=11% Similarity=-0.050 Sum_probs=88.3
Q ss_pred CEEEEEEcCCcEEEEEcCC-Ceeeeec--ccCCCCEEEEEEec-CCCEEEEEECCC----cEEEEEcCCCeEEEEEec--
Q 002266 74 TCLASGSIDHSVKLYKFPG-GEFQTNI--TRFTLPIRVLAFNK-SGSMLAAAGDDE----GIKLINTIDGSIARVLKG-- 143 (945)
Q Consensus 74 ~~Lasgs~Dg~V~iwdl~~-g~~~~~l--~~~~~~V~~l~fsp-dg~~Lasgs~Dg----~I~iwd~~~~~~~~~l~~-- 143 (945)
..|.+|+..| +.+++... +.....+ ......|.+|++.| +...|.+++..+ .|... ...+..-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence 3666777766 55555432 2222211 12245699999998 333444454444 34332 222322111111
Q ss_pred ------------CCCCEEEEEEccC--CCEEEEEeCCCcEEEEEccCCeeeeeecccC--CC----------CCCCCCCc
Q 002266 144 ------------HKGPVTGLAFDPN--SEYLASIDSIGTVIYWELQSGRELHNLKRVA--PD----------IGSDPSSM 197 (945)
Q Consensus 144 ------------h~~~V~~lafspd--g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~--~~----------~~~~~~~i 197 (945)
....|.+|+++|. ...|.+++..+.|...+ ..++.-..+.... +. .......+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 1124778999872 45566555556554432 2232222221100 00 01122356
Q ss_pred eEEEEcC-CCCEEEEEeCCCeEEEEECC--CCcEEEe-ecCCC--------CCCeEEEEEcCC-CCEEEEEECCCeEEEE
Q 002266 198 NVLSWSP-DGETLAVPGLKNDVVMYDRD--TAEKLFS-LRGDH--------VQPICFLSWSPN-GKYMATSSLDRQILIW 264 (945)
Q Consensus 198 ~~l~~sp-dg~~La~gs~dg~I~vwD~~--t~~~~~~-~~~~h--------~~~I~~l~fSpd-g~~Lasgs~Dg~I~IW 264 (945)
..+.++| +...|++++..+.|...+-. +++.+.. ....+ ...+.++.++|. ...|..++..+ |...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 7899988 34556666555555554322 2322211 00000 134889999985 45666666444 5554
Q ss_pred E
Q 002266 265 D 265 (945)
Q Consensus 265 D 265 (945)
+
T Consensus 259 ~ 259 (394)
T 3b7f_A 259 D 259 (394)
T ss_dssp E
T ss_pred C
Confidence 4
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=64.38 E-value=2.4e+02 Score=33.70 Aligned_cols=218 Identities=8% Similarity=-0.007 Sum_probs=112.9
Q ss_pred eEEEE-EecCCCEEEEE-EcC----CcEEEEEcCCCeeeee-cc-cCCC------CEEEEEEecCCCEEEEEEC------
Q 002266 64 VTALA-LSPNSTCLASG-SID----HSVKLYKFPGGEFQTN-IT-RFTL------PIRVLAFNKSGSMLAAAGD------ 123 (945)
Q Consensus 64 V~~la-~spdg~~Lasg-s~D----g~V~iwdl~~g~~~~~-l~-~~~~------~V~~l~fspdg~~Lasgs~------ 123 (945)
...+. ++|++++++.+ +.. ..|+++|+.+++.+.. +. ..+. ....++|..+ ..+..+..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCc
Confidence 34455 78999877765 322 4699999999987642 22 0000 1134578743 44444321
Q ss_pred -----CCcEEEEEcCCCe--EEEEEecCCCC-EEEEEEccCCCE-----EEEEeCC---CcEEEEEccC--Ceeeeeecc
Q 002266 124 -----DEGIKLINTIDGS--IARVLKGHKGP-VTGLAFDPNSEY-----LASIDSI---GTVIYWELQS--GRELHNLKR 185 (945)
Q Consensus 124 -----Dg~I~iwd~~~~~--~~~~l~~h~~~-V~~lafspdg~~-----Las~s~D---g~I~iwDl~t--~~~i~~~~~ 185 (945)
...|+.|.+-+.. -...+.+.... -.+...++++.+ +++.+.+ ..+.+.+... +. ...+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeec
Confidence 2358888776542 23334433333 334555666662 4443322 3455556543 22 222211
Q ss_pred cCCCCCCCCCCceEEEEcCCCCEEEEE----------eCCCeEEEEECCCCc-------EEEe-ecCCCCCCeEEEEEcC
Q 002266 186 VAPDIGSDPSSMNVLSWSPDGETLAVP----------GLKNDVVMYDRDTAE-------KLFS-LRGDHVQPICFLSWSP 247 (945)
Q Consensus 186 ~~~~~~~~~~~i~~l~~spdg~~La~g----------s~dg~I~vwD~~t~~-------~~~~-~~~~h~~~I~~l~fSp 247 (945)
+. . ..+..+.++.+++.. ...+.|.++++.++. .... +.......+..+.|..
T Consensus 289 --~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 359 (711)
T 4hvt_A 289 --PS------D-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK 359 (711)
T ss_dssp --CT------T-CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS
T ss_pred --CC------c-ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC
Confidence 10 1 123445566555532 146779999987631 1122 3332445678888887
Q ss_pred CCCEEEEEECCCe--EEEEECCCCe-eeee-ccC--CCCeeEEEEecCCCEE
Q 002266 248 NGKYMATSSLDRQ--ILIWDVGKKL-DIDR-QKF--DDRICCMAWKPIGNAL 293 (945)
Q Consensus 248 dg~~Lasgs~Dg~--I~IWD~~~~~-~i~~-~~~--~~~V~~la~spdg~~L 293 (945)
+ .++++...++. |.++++.++. .... ... ...+..+.+.+++..+
T Consensus 360 ~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~ 410 (711)
T 4hvt_A 360 D-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEA 410 (711)
T ss_dssp S-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCE
T ss_pred C-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEE
Confidence 6 56666666764 6777776664 1222 222 2456666666666533
No 366
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.51 E-value=2.8e+02 Score=34.28 Aligned_cols=38 Identities=8% Similarity=0.133 Sum_probs=33.5
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeec
Q 002266 147 PVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184 (945)
Q Consensus 147 ~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~ 184 (945)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888899999999999999999999887754
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=62.12 E-value=1.6e+02 Score=31.07 Aligned_cols=195 Identities=12% Similarity=0.020 Sum_probs=108.1
Q ss_pred CCCCEEEEEEcCCCeEEEEcCCCCcc--------ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEcC---CC--
Q 002266 27 QQAHHLVTASSSETTISIHDPLLPSN--------LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKFP---GG-- 93 (945)
Q Consensus 27 pdg~~L~t~g~~dg~V~IWd~~~~~~--------~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~---~g-- 93 (945)
++..++++.+ .+|.|+--.+..-.. ....+.. .+.+..+........++..+..|.++-+... ..
T Consensus 6 ~~e~~~v~~T-~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QKENIVVMLT-KKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp --CEEEEEEE-TTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred CCCCEEEEEe-CCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 4666777776 899998775422110 0111222 2445555555555677777888987776643 11
Q ss_pred ----eeeeec-c-cCCCCEEEEEEec---CCCEEEEEECCCcEEEEEcCC-------CeEEEEEecCCCCEEEEEEccCC
Q 002266 94 ----EFQTNI-T-RFTLPIRVLAFNK---SGSMLAAAGDDEGIKLINTID-------GSIARVLKGHKGPVTGLAFDPNS 157 (945)
Q Consensus 94 ----~~~~~l-~-~~~~~V~~l~fsp---dg~~Lasgs~Dg~I~iwd~~~-------~~~~~~l~~h~~~V~~lafspdg 157 (945)
..+... . .....|..+...+ +..+|+..+..|.++...+.. |.....+.. .+.+..+.....+
T Consensus 84 ~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 84 ASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred cCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 111011 1 1223455554433 467889999999999888743 222222333 4566666665556
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeee-ecccC-CCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 002266 158 EYLASIDSIGTVIYWELQSGRELHN-LKRVA-PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT 225 (945)
Q Consensus 158 ~~Las~s~Dg~I~iwDl~t~~~i~~-~~~~~-~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t 225 (945)
..++..+.+|.+..+....-..... -.+.. -.. .....+..+..-.++..+++.+..|....+.+..
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L-~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL-KEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC-CTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe-CCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 6788888999999888754211100 00000 001 1233455555555566788888899999888753
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=61.46 E-value=1.7e+02 Score=31.16 Aligned_cols=232 Identities=8% Similarity=-0.025 Sum_probs=132.2
Q ss_pred CEEEEEEcCCcEEEEEcCCCe-------ee-eecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEc---CC------Ce
Q 002266 74 TCLASGSIDHSVKLYKFPGGE-------FQ-TNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINT---ID------GS 136 (945)
Q Consensus 74 ~~Lasgs~Dg~V~iwdl~~g~-------~~-~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~---~~------~~ 136 (945)
..+++.+.+|.|+--.+.+-. -. ..-......+..+........|+.-+..|.++.... .. |.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 466777888888876643211 01 111122344555555556677777788887665543 22 22
Q ss_pred EEEE---EecCCCCEEEEEEcc---CCCEEEEEeCCCcEEEEEccCCeeeeeeccc-CCCCCCCCCCceEEEEcCCCCEE
Q 002266 137 IARV---LKGHKGPVTGLAFDP---NSEYLASIDSIGTVIYWELQSGRELHNLKRV-APDIGSDPSSMNVLSWSPDGETL 209 (945)
Q Consensus 137 ~~~~---l~~h~~~V~~lafsp---dg~~Las~s~Dg~I~iwDl~t~~~i~~~~~~-~~~~~~~~~~i~~l~~spdg~~L 209 (945)
.+.. +. ....|..+..-+ +..++++.+.+|.++...+..-..... ... .... .....+..+........|
T Consensus 84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-~G~~~i~l-ke~D~lv~~~~~~~~d~i 160 (327)
T 3uc1_A 84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-GGIVAVNL-RDNDELVGAVLCSAGDDL 160 (327)
T ss_dssp EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-SCEESCBC-CTTCCEEEEEEECTTCEE
T ss_pred EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-CceEEEEE-CCCCEEEEEEEecCCCEE
Confidence 2111 22 234555554333 467999999999999988765322111 000 0111 122334444444455677
Q ss_pred EEEeCCCeEEEEECC--CCcE-------EEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeee-------e
Q 002266 210 AVPGLKNDVVMYDRD--TAEK-------LFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI-------D 273 (945)
Q Consensus 210 a~gs~dg~I~vwD~~--t~~~-------~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i-------~ 273 (945)
+..+..|.+..+... .-.. +.-+.-.....|.++...+.+.+|+..+..|.++.-.+..-... .
T Consensus 161 ll~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~ 240 (327)
T 3uc1_A 161 LLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVL 240 (327)
T ss_dssp EEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEE
Confidence 788889998888776 2111 11121123456777776666778999999999998876432211 1
Q ss_pred eccC---CCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 274 RQKF---DDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 274 ~~~~---~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.... .+.+..+........++..+.+|.+..+...
T Consensus 241 ~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 241 TVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 1111 3456655555555678888999988888764
No 369
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=57.25 E-value=3.2e+02 Score=32.91 Aligned_cols=145 Identities=17% Similarity=0.077 Sum_probs=72.0
Q ss_pred CCCEEEEEECCCCC-EEEEEEcCCCeEEEEcCCCCccccccccc-------cccceEEEEEecC-CCEEEEEEcCCc---
Q 002266 17 AASFCSILWDQQAH-HLVTASSSETTISIHDPLLPSNLPKILRH-------HRDGVTALALSPN-STCLASGSIDHS--- 84 (945)
Q Consensus 17 ~~~V~svafspdg~-~L~t~g~~dg~V~IWd~~~~~~~~~~l~~-------h~~~V~~la~spd-g~~Lasgs~Dg~--- 84 (945)
.+.|.+|+++|... .+++++ ..+.|...+- .......+.. ....|.+|+++|. ...++.+.....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~-~~ggv~rS~D--gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~ 90 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYART-DIGGAYRWDA--GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDE 90 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEE-SSSCEEEEET--TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSS
T ss_pred CCcEEEEEECCCCCCEEEEEe-cCCCEEEecC--CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCc
Confidence 35799999999753 444444 5666655541 1111111111 1346999999984 344554443211
Q ss_pred -EEEEE-cCCCeeeeecccC-------C--CCEEEEEEecC-CCEEEEEECCCcEEEEEcCC-CeEEEEEec------CC
Q 002266 85 -VKLYK-FPGGEFQTNITRF-------T--LPIRVLAFNKS-GSMLAAAGDDEGIKLINTID-GSIARVLKG------HK 145 (945)
Q Consensus 85 -V~iwd-l~~g~~~~~l~~~-------~--~~V~~l~fspd-g~~Lasgs~Dg~I~iwd~~~-~~~~~~l~~------h~ 145 (945)
-.||. ...|+.-..+... . ..+..+++.|. ...+.++...+.| |-..+ |+.-..+.. ..
T Consensus 91 ~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 91 WAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp CCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTT
T ss_pred ccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCC
Confidence 23443 3344433322110 1 13556888874 3455555534433 33333 332222221 12
Q ss_pred CCEEEEEEccC-CCEEEEEeCC
Q 002266 146 GPVTGLAFDPN-SEYLASIDSI 166 (945)
Q Consensus 146 ~~V~~lafspd-g~~Las~s~D 166 (945)
..+..|.++|. +..++++..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 45888999984 4456655554
No 370
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=57.12 E-value=3.1e+02 Score=32.69 Aligned_cols=103 Identities=14% Similarity=0.061 Sum_probs=51.7
Q ss_pred CEEEEEECCCCC-EEEEEEcCCCeEEEEcCCCCccccccccc-------cccceEEEEEec-CCCEEEEEEcC-------
Q 002266 19 SFCSILWDQQAH-HLVTASSSETTISIHDPLLPSNLPKILRH-------HRDGVTALALSP-NSTCLASGSID------- 82 (945)
Q Consensus 19 ~V~svafspdg~-~L~t~g~~dg~V~IWd~~~~~~~~~~l~~-------h~~~V~~la~sp-dg~~Lasgs~D------- 82 (945)
.|.+|+++|... .++++. ..+.|..++-. ......+.. ....|.+|+++| +...++++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~-~~ggv~rS~D~--G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~ 100 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARA-AIGGAYRWDPS--TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLP 100 (737)
T ss_dssp CCCEEEECSSSTTCEEEEC-SSSCEEEEETT--TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSC
T ss_pred eeeEEEECCCCCCEEEEEe-cCCcEEEeCCC--CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccccc
Confidence 799999999753 344443 45666555421 111111111 124699999998 43444444321
Q ss_pred CcEEEEEcC-CCeeeeeccc-C--------CCCEEEEEEecC-CCEEEEEECC
Q 002266 83 HSVKLYKFP-GGEFQTNITR-F--------TLPIRVLAFNKS-GSMLAAAGDD 124 (945)
Q Consensus 83 g~V~iwdl~-~g~~~~~l~~-~--------~~~V~~l~fspd-g~~Lasgs~D 124 (945)
+...||... .|+.-..+.. . ...+..|++.|. ...++++...
T Consensus 101 ~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 101 NMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred CCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 124555543 3332222111 1 012467889884 3556665533
No 371
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.74 E-value=1e+02 Score=38.28 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=32.6
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec
Q 002266 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ 275 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~ 275 (945)
.+.+++..++..++++-+.|++++||++.++.++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5677778888899999999999999999999988764
No 372
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=55.23 E-value=2.2e+02 Score=30.32 Aligned_cols=238 Identities=11% Similarity=0.023 Sum_probs=124.0
Q ss_pred CCCCEEEEEEcCCCeEEEEcCCCC---ccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEc---C------CCe
Q 002266 27 QQAHHLVTASSSETTISIHDPLLP---SNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF---P------GGE 94 (945)
Q Consensus 27 pdg~~L~t~g~~dg~V~IWd~~~~---~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl---~------~g~ 94 (945)
|+...+++.+ .+|.|+--.+..- ......+.. .+.+..+........|+..+..|.++-+.. + .|.
T Consensus 3 ~~e~~~v~lT-~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 ASEDVIVTVT-KDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SCCEEEEEEE-TTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred cCCcEEEEEe-CCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCc
Confidence 4566777776 8999987643211 011112222 344555555555567777788888766654 2 123
Q ss_pred eeeeccc--CCCCEEEEEEec---CCCEEEEEECCCcEEEEEcCC--------CeEEEEEecCCCCEEEEEEccCCCEEE
Q 002266 95 FQTNITR--FTLPIRVLAFNK---SGSMLAAAGDDEGIKLINTID--------GSIARVLKGHKGPVTGLAFDPNSEYLA 161 (945)
Q Consensus 95 ~~~~l~~--~~~~V~~l~fsp---dg~~Lasgs~Dg~I~iwd~~~--------~~~~~~l~~h~~~V~~lafspdg~~La 161 (945)
.+..+-. ....|..+...+ ++.+++.++..|.++...+.. +.....+.. .+.+..+........++
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE
Confidence 2222111 123455543333 266899999999999988742 212222332 25666665555566777
Q ss_pred EEeCCCcEEEEEccCCeeeee-ecccC-CCCCCCCCCceEEEEcCCCC-EEEEEeCCCeEEEEECCCC-------cEEEe
Q 002266 162 SIDSIGTVIYWELQSGRELHN-LKRVA-PDIGSDPSSMNVLSWSPDGE-TLAVPGLKNDVVMYDRDTA-------EKLFS 231 (945)
Q Consensus 162 s~s~Dg~I~iwDl~t~~~i~~-~~~~~-~~~~~~~~~i~~l~~spdg~-~La~gs~dg~I~vwD~~t~-------~~~~~ 231 (945)
..+.+|.+..+....-..... -.+.. -.. .....+..+...+++. .|++.+..|..+..++... +-+..
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L-~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~ 238 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNL-KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVI 238 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCC-CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEEC
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEe-CCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEEC
Confidence 888899988888754211110 00000 001 1223444554434444 7888888888888776531 11222
Q ss_pred ecC--CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 232 LRG--DHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 232 ~~~--~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
+.. .....+..+....++..++..+..|.+....+..
T Consensus 239 ~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 239 LRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp SCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred eeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 211 0122344333223334455666677666666543
No 373
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=54.98 E-value=2e+02 Score=29.81 Aligned_cols=200 Identities=11% Similarity=-0.006 Sum_probs=113.7
Q ss_pred CCEEEEEEecCCCEEEEEECCCcEEEEE---cCCCeEEEEEecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEccCCee
Q 002266 104 LPIRVLAFNKSGSMLAAAGDDEGIKLIN---TIDGSIARVLKGHKGPVTGLAFDP-NSEYLASIDSIGTVIYWELQSGRE 179 (945)
Q Consensus 104 ~~V~~l~fspdg~~Lasgs~Dg~I~iwd---~~~~~~~~~l~~h~~~V~~lafsp-dg~~Las~s~Dg~I~iwDl~t~~~ 179 (945)
..+..+.......+|+.-+..|.++-.. +........+. ....|..+.... +..+++..+.+|.++...+..-.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~- 101 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE- 101 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-
Confidence 3455554444555666667777665432 22221111122 345666664421 46789999999999999876543
Q ss_pred eeeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCC---------CcEEEeecCCCCCCeEEEEEcCCCC
Q 002266 180 LHNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDT---------AEKLFSLRGDHVQPICFLSWSPNGK 250 (945)
Q Consensus 180 i~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t---------~~~~~~~~~~h~~~I~~l~fSpdg~ 250 (945)
... .............+..+........++..+..|.+..+.... |.....+. ....|..+...+++.
T Consensus 102 ~~~-~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~--~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 102 YKA-QGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE--KNDETSGLRIWNGEP 178 (276)
T ss_dssp TCS-TTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTCCEEEEEEESSCS
T ss_pred hhc-CCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC--CCCEEEEEEEeCCCC
Confidence 111 110000011233455555555566788888899988887532 22222222 335676666556677
Q ss_pred EEEEEECCCeEEEEECCCCeee-------eeccCCCCeeEEEEecCCCEEEEEEcCCeEEE--EecC
Q 002266 251 YMATSSLDRQILIWDVGKKLDI-------DRQKFDDRICCMAWKPIGNALAVIDVMGKYGV--WESV 308 (945)
Q Consensus 251 ~Lasgs~Dg~I~IWD~~~~~~i-------~~~~~~~~V~~la~spdg~~Las~s~DG~I~i--Wd~~ 308 (945)
+++..+..|.++...+..-... ....-.+.+..+........++..+.+|.+.. ++..
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 8999999999999887432211 11122345555544444457888889998888 8764
No 374
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=54.84 E-value=3.3e+02 Score=32.39 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=54.8
Q ss_pred ceEEEEEecCC-CEEEEEEcCCcEEEEEcCCCeeeeecccC-------CCCEEEEEEec-CCCEEEEEECC-------Cc
Q 002266 63 GVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITRF-------TLPIRVLAFNK-SGSMLAAAGDD-------EG 126 (945)
Q Consensus 63 ~V~~la~spdg-~~Lasgs~Dg~V~iwdl~~g~~~~~l~~~-------~~~V~~l~fsp-dg~~Lasgs~D-------g~ 126 (945)
.|..|+++|.. ..++++...+.|..++ ..|+.-..+... ...|.+|++.| +...++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 78999999953 5566666566666665 334433333221 24689999998 33444444321 12
Q ss_pred EEEEEcCC-CeEEEEEe-cCC--------CCEEEEEEccC-CCEEEEEeC
Q 002266 127 IKLINTID-GSIARVLK-GHK--------GPVTGLAFDPN-SEYLASIDS 165 (945)
Q Consensus 127 I~iwd~~~-~~~~~~l~-~h~--------~~V~~lafspd-g~~Las~s~ 165 (945)
..||-..+ |+.-..+. ... ..+..|+++|. ...|+++..
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 44554443 32211111 111 12467999985 356666653
No 375
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.25 E-value=2.6e+02 Score=32.46 Aligned_cols=62 Identities=19% Similarity=0.165 Sum_probs=44.2
Q ss_pred CCceEEEEcCCCCEEEEEeC------------CCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEEE
Q 002266 195 SSMNVLSWSPDGETLAVPGL------------KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATSS 256 (945)
Q Consensus 195 ~~i~~l~~spdg~~La~gs~------------dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs 256 (945)
.....|+|.++|.+.++... .+.|..++..+++....+.......++.++|+||+++|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34567999999987764321 226788888778765555443456789999999999887663
No 376
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=49.99 E-value=2.5e+02 Score=29.50 Aligned_cols=237 Identities=11% Similarity=0.042 Sum_probs=123.1
Q ss_pred CCCCEEEEEEcCCCeEEEEcCCCCcc--------ccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEc---CC---
Q 002266 27 QQAHHLVTASSSETTISIHDPLLPSN--------LPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF---PG--- 92 (945)
Q Consensus 27 pdg~~L~t~g~~dg~V~IWd~~~~~~--------~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl---~~--- 92 (945)
|+...+++.+ .+|.|+--.+..-.. ....+.. .+.+..+........|+..+..|.++-+.. +.
T Consensus 1 ~~e~~~v~~T-~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 1 TQEDVVVTLS-HQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCCEEEEEEE-TTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCS
T ss_pred CCCcEEEEEe-CCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCC
Confidence 3455677775 899997665432110 0011222 234444444445566777788888766654 22
Q ss_pred ---Ceeeeecc--cCCCCEEEEEEe---cCCCEEEEEECCCcEEEEEcCC-------CeEEEEEecCCCCEEEEEEccCC
Q 002266 93 ---GEFQTNIT--RFTLPIRVLAFN---KSGSMLAAAGDDEGIKLINTID-------GSIARVLKGHKGPVTGLAFDPNS 157 (945)
Q Consensus 93 ---g~~~~~l~--~~~~~V~~l~fs---pdg~~Lasgs~Dg~I~iwd~~~-------~~~~~~l~~h~~~V~~lafspdg 157 (945)
|..+..+. .....|..+... .++.+++..+..|.++...+.. +.....+..+ +.+..+......
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 22221111 123346555432 3567899999999999987742 2122223333 566665555555
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeee-ecccC-CCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------E
Q 002266 158 EYLASIDSIGTVIYWELQSGRELHN-LKRVA-PDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE-------K 228 (945)
Q Consensus 158 ~~Las~s~Dg~I~iwDl~t~~~i~~-~~~~~-~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~-------~ 228 (945)
..++..+.+|.+..+....-..... -.+.. -.. .....+..+....++..+++.+..|.++..++.... -
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRL-GEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC-CTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCC
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEe-CCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCC
Confidence 6677788889888887653211100 00000 011 122345555444456678888889998888763221 1
Q ss_pred EE--eecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 229 LF--SLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 229 ~~--~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
+. .+.. ....+..+....+..-++..+.+|.+.-+.+..
T Consensus 237 ~~~~~~~~-~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 237 VISIKVTE-RNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EESSCCCT-TTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEeeEecC-CCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 11 1221 224454444433344555666677776666644
No 377
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=46.84 E-value=1.2e+02 Score=26.69 Aligned_cols=26 Identities=15% Similarity=0.373 Sum_probs=16.6
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 241 CFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 241 ~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
..+.+..+|.+++... ++.+ +|...+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 4567788888777643 4443 787654
No 378
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=45.09 E-value=3.3e+02 Score=29.42 Aligned_cols=230 Identities=9% Similarity=0.061 Sum_probs=116.3
Q ss_pred CEEEEEEcCCCeEEEEcCCCCcc----------ccccccc-cccceEEEEEecCCCEEEEEEcCCcEEEEEcCCC-----
Q 002266 30 HHLVTASSSETTISIHDPLLPSN----------LPKILRH-HRDGVTALALSPNSTCLASGSIDHSVKLYKFPGG----- 93 (945)
Q Consensus 30 ~~L~t~g~~dg~V~IWd~~~~~~----------~~~~l~~-h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~g----- 93 (945)
...++.. .+|.|+.|-.....+ .+..+.. ....+..++++.-..+.+.-..+|.|+.|-....
T Consensus 63 ~~~~~l~-~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 63 QTLFAVT-ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TEEEEEE-TTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CeEEEEc-CCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 3333333 688888885332211 1111111 1234555666666666677788999999964321
Q ss_pred ------eeeeecccC-CCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC----------e-EEEEEec-CCCCEEEEEEc
Q 002266 94 ------EFQTNITRF-TLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG----------S-IARVLKG-HKGPVTGLAFD 154 (945)
Q Consensus 94 ------~~~~~l~~~-~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~----------~-~~~~l~~-h~~~V~~lafs 154 (945)
.....+... ...|..++.. ....++-..+|.|+.|-.... . ....+.. ....|..++..
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 011112211 2256665543 455666678999999965321 0 1111111 23457777765
Q ss_pred cCCCEEEEEeCCCcEEEEEccCCeee-------eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCC-
Q 002266 155 PNSEYLASIDSIGTVIYWELQSGREL-------HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTA- 226 (945)
Q Consensus 155 pdg~~Las~s~Dg~I~iwDl~t~~~i-------~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~- 226 (945)
....+.++...+|.|+.|-......+ .......... ....+..++.. ..+.++-+.+|.|+.|=....
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~--~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~G 295 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYH 295 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGG--TTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGG
T ss_pred CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEeccc--CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCC
Confidence 43356666678999999965321100 0011000000 11224444432 334444467888988865321
Q ss_pred ----------cEEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q 002266 227 ----------EKLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGK 268 (945)
Q Consensus 227 ----------~~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~ 268 (945)
.....+.......|..++. ...+.++...||.|+.|=...
T Consensus 296 qLG~g~~~~~~~P~~v~~l~~~~v~~ia~--G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 296 RLGHGSDDHVRRPRQVQGLQGKKVIAIAT--GSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp TTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTCCEEEEECCT
T ss_pred CCCCCCCccccCCeEeccCCCCCEEEEEe--ccCeEEEECCCCCEEEeeCCC
Confidence 1112222212234555554 344556667899999997654
No 379
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=44.99 E-value=3.4e+02 Score=29.60 Aligned_cols=215 Identities=9% Similarity=0.031 Sum_probs=115.2
Q ss_pred ccCCCCCEEEEEECCCCCEEEEEEcC--------------CCeEEEEcCCCC--cccccccc------ccccceEEEEEe
Q 002266 13 KCGNAASFCSILWDQQAHHLVTASSS--------------ETTISIHDPLLP--SNLPKILR------HHRDGVTALALS 70 (945)
Q Consensus 13 ~~gh~~~V~svafspdg~~L~t~g~~--------------dg~V~IWd~~~~--~~~~~~l~------~h~~~V~~la~s 70 (945)
.|.+--.|..+...+++++-+.=.+. --.|.+||+.+. .. .+.+. .....+..+++.
T Consensus 82 ~~~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~l-i~~y~~p~~~~~~~S~l~di~VD 160 (381)
T 3q6k_A 82 TGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPE-VVRYYFPTRLVEKPTYFGGFAVD 160 (381)
T ss_dssp SSCSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCE-EEEEECCGGGCCCGGGEEEEEEE
T ss_pred cccceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCcee-EEEEECCHHhcccCCccceEEEe
Confidence 34667789999999988865543211 126788999887 42 22221 123567888887
Q ss_pred ---cC----CCEEEEEE-cCCcEEEEEcCCCeeeeecccCCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCCeEEEEEe
Q 002266 71 ---PN----STCLASGS-IDHSVKLYKFPGGEFQTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLK 142 (945)
Q Consensus 71 ---pd----g~~Lasgs-~Dg~V~iwdl~~g~~~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~~~~~~l~ 142 (945)
++ +.++..+. ..+-|.|||+.+++..+.+..+ |.|+.....+ -+|. .. .+
T Consensus 161 ~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~--------~~pd~~~~~~--i~G~----------~~-~~- 218 (381)
T 3q6k_A 161 VANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT--------FKAERPTKFD--YGGK----------EY-EF- 218 (381)
T ss_dssp ESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG--------GSCCSCEEEE--ETTE----------EE-EE-
T ss_pred cccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC--------CccccCcceE--ECCE----------Ee-Ee-
Confidence 22 23333333 3577999999999876655321 2343111111 1121 11 11
Q ss_pred cCCCCEEEEEEccC----CCEEEEEeCCCcEEEEEccC-----CeeeeeecccCCCCCCCCCCceEEEEc-CCCCEEEEE
Q 002266 143 GHKGPVTGLAFDPN----SEYLASIDSIGTVIYWELQS-----GRELHNLKRVAPDIGSDPSSMNVLSWS-PDGETLAVP 212 (945)
Q Consensus 143 ~h~~~V~~lafspd----g~~Las~s~Dg~I~iwDl~t-----~~~i~~~~~~~~~~~~~~~~i~~l~~s-pdg~~La~g 212 (945)
...|..|+++|+ ++.|..+...+ -++|.+.+ ......+.... .. ........+++. .+|..+++-
T Consensus 219 --~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G-~k-g~~s~~~~~~~D~~~G~ly~~~ 293 (381)
T 3q6k_A 219 --KAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLG-NR-GKYNDAIALAYDPKTKVIFFAE 293 (381)
T ss_dssp --CCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEE-EC-CTTCCEEEEEECTTTCEEEEEE
T ss_pred --ccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEee-ec-CCCCCcceEEEeCCCCeEEEEe
Confidence 356899999997 67777665544 24444432 11101111000 00 001222346675 577777777
Q ss_pred eCCCeEEEEECCC-C----cEEEeecCCCCCCeEEEEEcCCCCEEEEE
Q 002266 213 GLKNDVVMYDRDT-A----EKLFSLRGDHVQPICFLSWSPNGKYMATS 255 (945)
Q Consensus 213 s~dg~I~vwD~~t-~----~~~~~~~~~h~~~I~~l~fSpdg~~Lasg 255 (945)
-..+.|..|+..+ . ..........-..+..+.+.++|.+.+.+
T Consensus 294 ~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 294 ANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp SSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred ccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 7788999999875 1 11222222233356677776666544444
No 380
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=44.62 E-value=3.4e+02 Score=29.50 Aligned_cols=273 Identities=11% Similarity=0.054 Sum_probs=133.5
Q ss_pred CCEEEEEECCCCCEEEEEEcCCCeEEEEcCCCCcc----------ccccccc-cccceEEEEEecCCCEEEEEEcC-CcE
Q 002266 18 ASFCSILWDQQAHHLVTASSSETTISIHDPLLPSN----------LPKILRH-HRDGVTALALSPNSTCLASGSID-HSV 85 (945)
Q Consensus 18 ~~V~svafspdg~~L~t~g~~dg~V~IWd~~~~~~----------~~~~l~~-h~~~V~~la~spdg~~Lasgs~D-g~V 85 (945)
..|..|+.. +.+.++.. .+|.|+.|-.....+ .+..+.. ....|..++...+ +.+.-..+ +.|
T Consensus 16 ~~v~~ia~G--~~hs~al~-~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~--ht~al~~~gg~v 90 (406)
T 4d9s_A 16 RKVLIISAG--ASHSVALL-SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD--HTVAYSQSGMEV 90 (406)
T ss_dssp CCEEEEEEC--SSEEEEEE-TTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS--EEEEEETTTTEE
T ss_pred cceEEEecC--CCeEEEEE-eCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcc--eEEEEECCCCEE
Confidence 456666653 33444443 688999995432211 1111111 1235666665433 33333455 489
Q ss_pred EEEEcCCC-e----------eeeeccc-CCCCEEEEEEecCCCEEEEEECCCcEEEEEcCCC-e----------EEEEEe
Q 002266 86 KLYKFPGG-E----------FQTNITR-FTLPIRVLAFNKSGSMLAAAGDDEGIKLINTIDG-S----------IARVLK 142 (945)
Q Consensus 86 ~iwdl~~g-~----------~~~~l~~-~~~~V~~l~fspdg~~Lasgs~Dg~I~iwd~~~~-~----------~~~~l~ 142 (945)
+.|-.... + ....+.. ....|..|+.. ..+.++-..+|.|+.|-.... + ....+.
T Consensus 91 ~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~ 168 (406)
T 4d9s_A 91 YSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168 (406)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECG
T ss_pred EEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEec
Confidence 99964321 1 0111111 12356666653 345666678999999975431 1 111111
Q ss_pred c-CCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeee-------eeecccCCCCCCCCCCceEEEEcCCCCEEEEEeC
Q 002266 143 G-HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGREL-------HNLKRVAPDIGSDPSSMNVLSWSPDGETLAVPGL 214 (945)
Q Consensus 143 ~-h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i-------~~~~~~~~~~~~~~~~i~~l~~spdg~~La~gs~ 214 (945)
. ....|..++.. ..+.++...+|.|+.|-......+ ......... .....+..++. ...+.++-+.
T Consensus 169 ~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~--~~~~~i~~va~--G~~ht~~l~~ 242 (406)
T 4d9s_A 169 AFEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVAC--GWRHTISVSY 242 (406)
T ss_dssp GGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCC--STTCCEEEEEE--CSSEEEEEET
T ss_pred ccCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecc--cCCceEEEEEE--CCCcEEEEcC
Confidence 1 12357666654 345555678899999965431110 000000000 11123444443 2334445567
Q ss_pred CCeEEEEECCCCc-----------EEEeecCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeee-----------
Q 002266 215 KNDVVMYDRDTAE-----------KLFSLRGDHVQPICFLSWSPNGKYMATSSLDRQILIWDVGKKLDI----------- 272 (945)
Q Consensus 215 dg~I~vwD~~t~~-----------~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i----------- 272 (945)
+|.|+.|-....- ....+.......|..++. ...+.++-..||.|+.|=....-.+
T Consensus 243 ~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~--G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p 320 (406)
T 4d9s_A 243 SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG--GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSP 320 (406)
T ss_dssp TCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEE
T ss_pred CCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEe--cCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccC
Confidence 8888888643211 112222112234555544 3445666678999999975431111
Q ss_pred eecc--CCCCeeEEEEecCCCEEEEEEcCCeEEEEec
Q 002266 273 DRQK--FDDRICCMAWKPIGNALAVIDVMGKYGVWES 307 (945)
Q Consensus 273 ~~~~--~~~~V~~la~spdg~~Las~s~DG~I~iWd~ 307 (945)
.... ....|..++.. ....++...+|.|+.|=.
T Consensus 321 ~~v~~~~~~~v~~va~G--~~hs~alt~~G~v~~wG~ 355 (406)
T 4d9s_A 321 VQVRFPDDQKVVQVSCG--WRHTLAVTERNNVFAWGR 355 (406)
T ss_dssp EEECCGGGCCEEEEEEC--SSEEEEEETTSCEEEEEC
T ss_pred EEEeccCCCcEEEEEeC--CCeEEEEeCCCCEEEecC
Confidence 0111 12345555443 345666678999999954
No 381
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=42.53 E-value=54 Score=38.36 Aligned_cols=59 Identities=19% Similarity=0.166 Sum_probs=43.6
Q ss_pred ceEEEEcCCCCEEEEEeC------------CCeEEEEECCCCcEEEeecCCCCCCeEEEEEcCCCCEEEEE
Q 002266 197 MNVLSWSPDGETLAVPGL------------KNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATS 255 (945)
Q Consensus 197 i~~l~~spdg~~La~gs~------------dg~I~vwD~~t~~~~~~~~~~h~~~I~~l~fSpdg~~Lasg 255 (945)
.-.|+|+|.|.++++-.. .+.+.+.+..+++....+..+....++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 456999999996655322 13467777777877666666567899999999999887665
No 382
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=35.39 E-value=4e+02 Score=33.64 Aligned_cols=38 Identities=8% Similarity=0.133 Sum_probs=31.9
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeec
Q 002266 147 PVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK 184 (945)
Q Consensus 147 ~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~ 184 (945)
.+.+++..++..++++-+.|++++||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556666788899999999999999999999888765
No 383
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.39 E-value=3.5e+02 Score=34.16 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=31.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeec
Q 002266 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQ 275 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~ 275 (945)
.+.+++..++..++++-+.|++++||++.++.++...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4455666778899999999999999999999887763
No 384
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=32.17 E-value=44 Score=32.54 Aligned_cols=46 Identities=17% Similarity=0.011 Sum_probs=37.1
Q ss_pred HHHHHhcCCccchHHHHHHHcCChhhHHHHHHHHHHcCCchHHHHH
Q 002266 743 LIASCCNGDKLVRATELVKLLSLDKSMQGAIKLVTKLKLPNLAERF 788 (945)
Q Consensus 743 Lf~~ac~~~~~~rA~~l~~~l~~~~sl~~A~k~A~~~~~~~La~ki 788 (945)
-|.+|.+.+++.+|+++|+.|..+..-.-=...|-+.+...||++-
T Consensus 11 rF~LAL~lg~l~~A~e~a~~l~~~~~Wk~Lg~~AL~~gn~~lAe~c 56 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKKLNDSITWERLIQEALAQGNASLAEMI 56 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHhCCHHHHHHHHHHHHHcCChHHHHHH
Confidence 3677888899999999999998887777777777777777777763
No 385
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=31.54 E-value=5.3e+02 Score=27.92 Aligned_cols=234 Identities=10% Similarity=0.066 Sum_probs=115.1
Q ss_pred ceEEEEEecCCCEEEEEEcCCcEEEEEcCC-Cee-----------eeecccCCCCEEEEEEecCCCEEEEEECCCcEEEE
Q 002266 63 GVTALALSPNSTCLASGSIDHSVKLYKFPG-GEF-----------QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIKLI 130 (945)
Q Consensus 63 ~V~~la~spdg~~Lasgs~Dg~V~iwdl~~-g~~-----------~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~iw 130 (945)
.|..|+.. +.+.+.-..||.|+.|-... +++ ..........|..|+.. ..+.++-..+|.|+.|
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G--~~hs~al~~~G~v~~w 151 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAG--DSHSACLLEDGRVFAW 151 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcC--cCeEEEEeCCCeEEEE
Confidence 46555543 44566667899999997533 110 00001123356655543 3455566789999999
Q ss_pred Ec--CC-CeE---------EEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeecc-------------
Q 002266 131 NT--ID-GSI---------ARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLKR------------- 185 (945)
Q Consensus 131 d~--~~-~~~---------~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~~------------- 185 (945)
-. .. +++ ..........|..|+.. ..+.++...+|.|+.|-....-.+-.-..
T Consensus 152 G~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~ 229 (423)
T 3mvd_K 152 GSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRD 229 (423)
T ss_dssp ECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTT
T ss_pred eCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCeEEEeeCCcCCccCCCccccccccccccccc
Confidence 75 22 221 11111223457777654 34555567889999997543211110000
Q ss_pred -cCCC--CCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------EEEeecCCCCCCeEEEEEcCCCCE
Q 002266 186 -VAPD--IGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE-----------KLFSLRGDHVQPICFLSWSPNGKY 251 (945)
Q Consensus 186 -~~~~--~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~-----------~~~~~~~~h~~~I~~l~fSpdg~~ 251 (945)
..+. .......+..++.. ....++.-+.++.|+.|-..... ....... ....|..++. ...+
T Consensus 230 ~~~p~~v~~~~~~~v~~i~~g-~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~-~~~~v~~ia~--G~~h 305 (423)
T 3mvd_K 230 LLRPTQLIITRAKPFEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT-ELKDIRHIAG--GQHH 305 (423)
T ss_dssp TSSCEEECCTTCCCEEEEEEE-TTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEE-CCCSEEEEEE--CSSE
T ss_pred ccCCeEEeecCCccEEEEEEC-CcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEc-CCCCeEEEEc--ccCe
Confidence 0000 00011223333332 11222332568888888643211 1111111 1234555543 3445
Q ss_pred EEEEECCCeEEEEECCCC-------------eeeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 252 MATSSLDRQILIWDVGKK-------------LDIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 252 Lasgs~Dg~I~IWD~~~~-------------~~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
.+.-..+|.|+.|=.... .+.........|..++... ..-++.+.+|.|+.|=..
T Consensus 306 t~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~--~hs~alt~~G~v~~wG~n 373 (423)
T 3mvd_K 306 TVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE--VCSYAVTIDGKLYSWGSG 373 (423)
T ss_dssp EEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET--TEEEEEETTSCEEEEECC
T ss_pred EEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC--CeEEEEcCCCCEEEECCC
Confidence 666677999999965321 0111112223566666543 355555889999999543
No 386
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=29.82 E-value=1.3e+02 Score=35.81 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=29.2
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeeeeeccC
Q 002266 239 PICFLSWSPNGKYMATSSLDRQILIWDVGKKLDIDRQKF 277 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~~i~~~~~ 277 (945)
.|.++.+ +..++++-+.|.++++|++.++.++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3444444 478999999999999999999998877443
No 387
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=29.18 E-value=5.7e+02 Score=27.58 Aligned_cols=233 Identities=10% Similarity=0.028 Sum_probs=114.7
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCC-Ce----------eeeecccC-CCCEEEEEEecCCCEEEEEECC-CcEE
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPG-GE----------FQTNITRF-TLPIRVLAFNKSGSMLAAAGDD-EGIK 128 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~-g~----------~~~~l~~~-~~~V~~l~fspdg~~Lasgs~D-g~I~ 128 (945)
..|..|+.. +.+.+.-..+|.|+.|-... ++ ....+... ...|..++... .+.++-..+ +.|+
T Consensus 16 ~~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~--~ht~al~~~gg~v~ 91 (406)
T 4d9s_A 16 RKVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA--DHTVAYSQSGMEVY 91 (406)
T ss_dssp CCEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECS--SEEEEEETTTTEEE
T ss_pred cceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCc--ceEEEEECCCCEEE
Confidence 456666543 33445556788888886432 11 11112211 23566666543 333333444 5888
Q ss_pred EEEcCCC---------eEE--EEEec-CCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeee-------eeecccCCC
Q 002266 129 LINTIDG---------SIA--RVLKG-HKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGREL-------HNLKRVAPD 189 (945)
Q Consensus 129 iwd~~~~---------~~~--~~l~~-h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i-------~~~~~~~~~ 189 (945)
.|-.... ... ..+.. ....|..|+.. ..+.+....+|.|+.|-....-.+ .........
T Consensus 92 ~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~ 169 (406)
T 4d9s_A 92 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 169 (406)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGG
T ss_pred EEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecc
Confidence 8854321 111 11111 22367777764 345556678899999975432110 000000000
Q ss_pred CCCCCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------EEEeecCCCCCCeEEEEEcCCCCEEEEEECC
Q 002266 190 IGSDPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE-----------KLFSLRGDHVQPICFLSWSPNGKYMATSSLD 258 (945)
Q Consensus 190 ~~~~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~-----------~~~~~~~~h~~~I~~l~fSpdg~~Lasgs~D 258 (945)
.....|..++. ...+.++-+.+|.|+.|-..... ....+.......|..++. ...+.++-+.+
T Consensus 170 --~~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~--G~~ht~~l~~~ 243 (406)
T 4d9s_A 170 --FEGIRIKMVAA--GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC--GWRHTISVSYS 243 (406)
T ss_dssp --GTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE--CSSEEEEEETT
T ss_pred --cCCCcEEEEec--CCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE--CCCcEEEEcCC
Confidence 01123444443 33455555678899999643210 112222212245555554 34456666789
Q ss_pred CeEEEEECCCCeee-----------eecc--CCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 259 RQILIWDVGKKLDI-----------DRQK--FDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 259 g~I~IWD~~~~~~i-----------~~~~--~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
|.|+.|-....-.+ .... ....|..++-. ....++...+|.|+.|=..
T Consensus 244 G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n 304 (406)
T 4d9s_A 244 GALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WRHTMALTSDGKLYGWGWN 304 (406)
T ss_dssp CCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECC
T ss_pred CCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CCEEEEEcCCCeEEEeeCC
Confidence 99999975432111 1111 12335555433 3456666789999999643
No 388
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.67 E-value=1e+02 Score=36.08 Aligned_cols=58 Identities=16% Similarity=0.058 Sum_probs=40.8
Q ss_pred CeEEEEEcCCCCEEEEEECC------------CeEEEEECCCCeeeeec--cCCCCeeEEEEecCCCEEEEE
Q 002266 239 PICFLSWSPNGKYMATSSLD------------RQILIWDVGKKLDIDRQ--KFDDRICCMAWKPIGNALAVI 296 (945)
Q Consensus 239 ~I~~l~fSpdg~~Lasgs~D------------g~I~IWD~~~~~~i~~~--~~~~~V~~la~spdg~~Las~ 296 (945)
..-.|+|+|.|+++++-..+ ..+.+.+..++++.... .....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34669999999977665432 24566666777665542 245789999999999987664
No 389
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=28.52 E-value=5.9e+02 Score=27.48 Aligned_cols=149 Identities=14% Similarity=0.067 Sum_probs=86.6
Q ss_pred ECCCCCEEEEEEcCCCeEEEEcCCC------C--ccccccccccccceEEEEEecCCCEEEEEEcCCcEEEEEc---C--
Q 002266 25 WDQQAHHLVTASSSETTISIHDPLL------P--SNLPKILRHHRDGVTALALSPNSTCLASGSIDHSVKLYKF---P-- 91 (945)
Q Consensus 25 fspdg~~L~t~g~~dg~V~IWd~~~------~--~~~~~~l~~h~~~V~~la~spdg~~Lasgs~Dg~V~iwdl---~-- 91 (945)
+-|+..++++.+ .+|.|+--.+.. + ......+. ..+.+..+........|+..+..|.++-+.. +
T Consensus 3 lI~~e~~~v~lT-~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 3 LIAPEDVVVTLS-HAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCEEEEEE-SSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred cccCCCEEEEEe-CCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCC
Confidence 346778888886 899998754211 0 01111122 2455666655666667777788888776653 2
Q ss_pred ----CCeeeeecc--cCCCCEEEEEEec---CCCEEEEEECCCcEEEEEcCC-------CeEEEEEecCCCCEEEEEEcc
Q 002266 92 ----GGEFQTNIT--RFTLPIRVLAFNK---SGSMLAAAGDDEGIKLINTID-------GSIARVLKGHKGPVTGLAFDP 155 (945)
Q Consensus 92 ----~g~~~~~l~--~~~~~V~~l~fsp---dg~~Lasgs~Dg~I~iwd~~~-------~~~~~~l~~h~~~V~~lafsp 155 (945)
.|.....+. .....|..+.... ++.+|+.++..|.++...+.. +.....+.. .+.+..+....
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 122222111 1234555554432 456899999999999988643 222222332 34555555555
Q ss_pred CCCEEEEEeCCCcEEEEEccC
Q 002266 156 NSEYLASIDSIGTVIYWELQS 176 (945)
Q Consensus 156 dg~~Las~s~Dg~I~iwDl~t 176 (945)
....++..+.+|.+..+....
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGG
T ss_pred CCceEEEEeCCCeEEEEEccc
Confidence 556777788889888887643
No 390
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=27.59 E-value=8.4e+02 Score=28.97 Aligned_cols=154 Identities=14% Similarity=0.085 Sum_probs=74.3
Q ss_pred cccceEEEEEecCC-CEEEEEEcCCcEEEEEcCCCeeeeeccc------------CCCCEEEEEEec-CCCEEEEEECC-
Q 002266 60 HRDGVTALALSPNS-TCLASGSIDHSVKLYKFPGGEFQTNITR------------FTLPIRVLAFNK-SGSMLAAAGDD- 124 (945)
Q Consensus 60 h~~~V~~la~spdg-~~Lasgs~Dg~V~iwdl~~g~~~~~l~~------------~~~~V~~l~fsp-dg~~Lasgs~D- 124 (945)
-.+.|.+|+++|.+ ..++++...|.|.... ..|+.-..+.. ....+.++++.| +...+.++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 35689999999965 5666667666665443 33443333221 124589999988 33444443321
Q ss_pred ----CcEEEEEcCC-CeEEEEEec-C------CC--CEEEEEEccC-CCEEEEEeCCCcEEEEEccCCeeeeeecccCCC
Q 002266 125 ----EGIKLINTID-GSIARVLKG-H------KG--PVTGLAFDPN-SEYLASIDSIGTVIYWELQSGRELHNLKRVAPD 189 (945)
Q Consensus 125 ----g~I~iwd~~~-~~~~~~l~~-h------~~--~V~~lafspd-g~~Las~s~Dg~I~iwDl~t~~~i~~~~~~~~~ 189 (945)
....||-..+ |+.-..+.. . .+ ....|+++|. ...++++...+.|. .....|+.-..+... +.
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~~~~~~-~~ 175 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWSRMNQL-PD 175 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCEECTTS-CC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCccccccC-cc
Confidence 1233443333 332112111 0 11 1146888874 34555555444332 222233332222211 11
Q ss_pred CCCCCCCceEEEEcCC-CCEEEEEeCCC
Q 002266 190 IGSDPSSMNVLSWSPD-GETLAVPGLKN 216 (945)
Q Consensus 190 ~~~~~~~i~~l~~spd-g~~La~gs~dg 216 (945)
.......+..++++|. ...++++..++
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1112234678899884 44555555554
No 391
>1ov9_A VICH protein; dimer, helix, coiled-coil, DNA binding protein; 2.30A {Vibrio cholerae} SCOP: a.155.1.1
Probab=26.55 E-value=11 Score=28.58 Aligned_cols=44 Identities=20% Similarity=0.270 Sum_probs=35.5
Q ss_pred HHHcCChhhHHHHHHHHHHcCCchHHHHHHHHHHHHhccccccC
Q 002266 760 VKLLSLDKSMQGAIKLVTKLKLPNLAERFNSILEERLLSETKET 803 (945)
Q Consensus 760 ~~~l~~~~sl~~A~k~A~~~~~~~La~ki~~l~e~~~~~~~~~~ 803 (945)
-+.|.+..+|.+++|=-.--.|..+.+|+..+.++|.+++++.+
T Consensus 4 lk~L~niRsLRA~arelsle~Lee~~eKl~~Vv~Erree~~~~~ 47 (50)
T 1ov9_A 4 TKTLLNIRSLRAYARELTIEQLEEALDKLTTVVQERKEAEAEEI 47 (50)
T ss_dssp HHHHTCHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678889999998877777788899999999999877766654
No 392
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=24.37 E-value=1.7e+02 Score=33.91 Aligned_cols=59 Identities=14% Similarity=0.040 Sum_probs=41.8
Q ss_pred CCeEEEEEcCCCCEEEEEEC------------CCeEEEEECCCCeeeeecc--CCCCeeEEEEecCCCEEEEE
Q 002266 238 QPICFLSWSPNGKYMATSSL------------DRQILIWDVGKKLDIDRQK--FDDRICCMAWKPIGNALAVI 296 (945)
Q Consensus 238 ~~I~~l~fSpdg~~Lasgs~------------Dg~I~IWD~~~~~~i~~~~--~~~~V~~la~spdg~~Las~ 296 (945)
.....|.|+++|.+.++... ...|..++..++++..... ....++.++|+||++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 35677999999987774321 1257777777777655543 23568999999999987775
No 393
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=21.35 E-value=7.8e+02 Score=26.44 Aligned_cols=233 Identities=11% Similarity=-0.001 Sum_probs=117.3
Q ss_pred cceEEEEEecCCCEEEEEEcCCcEEEEEcCC-Cee------------eeecccCCCCEEEEEEecCCCEEEEEECCCcEE
Q 002266 62 DGVTALALSPNSTCLASGSIDHSVKLYKFPG-GEF------------QTNITRFTLPIRVLAFNKSGSMLAAAGDDEGIK 128 (945)
Q Consensus 62 ~~V~~la~spdg~~Lasgs~Dg~V~iwdl~~-g~~------------~~~l~~~~~~V~~l~fspdg~~Lasgs~Dg~I~ 128 (945)
..|..|+... .+.+.-..+|.|+.|-... +++ ...+ .....|..++.. ..+.++-..+|.|+
T Consensus 59 ~~i~~va~G~--~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~l~~~i~~va~G--~~hs~alt~~G~v~ 133 (413)
T 1a12_A 59 EDVVQAEAGG--MHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQVSAG--DSHTAALTDDGRVF 133 (413)
T ss_dssp SCEEEEEECS--SEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEEC-CCCSCEEEEEEC--SSEEEEEETTSCEE
T ss_pred CCeEEEEeCC--CeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEe-cCCCcEEEEecC--CCeEEEEcCCCcEE
Confidence 4566665543 3455557889999997543 110 0011 123356665543 34556667889999
Q ss_pred EEEc--CC-CeE-----------EEEEecCCCCEEEEEEccCCCEEEEEeCCCcEEEEEccCCeeeeeec----------
Q 002266 129 LINT--ID-GSI-----------ARVLKGHKGPVTGLAFDPNSEYLASIDSIGTVIYWELQSGRELHNLK---------- 184 (945)
Q Consensus 129 iwd~--~~-~~~-----------~~~l~~h~~~V~~lafspdg~~Las~s~Dg~I~iwDl~t~~~i~~~~---------- 184 (945)
.|-. .. +++ ...+ .....|..|+.- ..+.+..+.+|.|+.|=....-.+-.-.
T Consensus 134 ~wG~~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~ 210 (413)
T 1a12_A 134 LWGSFRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVASG--NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQ 210 (413)
T ss_dssp EEECEEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGG
T ss_pred EeeCCcCCCCccCcCCccccccCCEEe-cCCCCEEEEEec--CceEEEEcCCCCEEEeeCCCCCccCCCccccccccccc
Confidence 9964 21 110 1111 223467666654 3455556688999999764421111000
Q ss_pred ----ccCCC-CCC------CCCCceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------EEEeecCCCC--CCe
Q 002266 185 ----RVAPD-IGS------DPSSMNVLSWSPDGETLAVPGLKNDVVMYDRDTAE-----------KLFSLRGDHV--QPI 240 (945)
Q Consensus 185 ----~~~~~-~~~------~~~~i~~l~~spdg~~La~gs~dg~I~vwD~~t~~-----------~~~~~~~~h~--~~I 240 (945)
...+. ... ....|..++.. ..+.++-+.+|.|+.|-....- ....+..... ..|
T Consensus 211 ~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G--~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v 288 (413)
T 1a12_A 211 GLERLLVPKCVMLKSRGSRGHVRFQDAFCG--AYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSW 288 (413)
T ss_dssp GHHHHHSCEECCCBCSSCCSBCCEEEEEEE--TTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCE
T ss_pred cccccccCceEeeccccccCCccEEEEEeC--CCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceE
Confidence 00000 000 11234444443 2344444578889988654311 1112211011 235
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCe------------eeeeccCCCCeeEEEEecCCCEEEEEEcCCeEEEEecC
Q 002266 241 CFLSWSPNGKYMATSSLDRQILIWDVGKKL------------DIDRQKFDDRICCMAWKPIGNALAVIDVMGKYGVWESV 308 (945)
Q Consensus 241 ~~l~fSpdg~~Lasgs~Dg~I~IWD~~~~~------------~i~~~~~~~~V~~la~spdg~~Las~s~DG~I~iWd~~ 308 (945)
..++. ...+.++-..||.|+.|-....- ....+..-..|..++-. ....++...+|.|+.|=..
T Consensus 289 ~~ia~--G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G--~~hs~alt~~G~v~~wG~n 364 (413)
T 1a12_A 289 VGFSG--GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACG--ASVGYAVTKDGRVFAWGMG 364 (413)
T ss_dssp EEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEEC--SSEEEEEETTSCEEEEECC
T ss_pred EEEec--ccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEEC--cceEEEEeCCCCEEEecCC
Confidence 55554 34455666779999999753210 01111112256655543 3456667789999999543
Done!