Query         002268
Match_columns 944
No_of_seqs    40 out of 42
Neff          3.3 
Searched_HMMs 29240
Date          Mon Mar 25 19:26:37 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002268.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002268hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1i84_S Smooth muscle myosin he  97.6 0.00012   4E-09   89.6  10.1   13   21-33    324-336 (1184)
  2 1i84_S Smooth muscle myosin he  97.5 0.00024 8.1E-09   86.9  10.0   32  556-588  1148-1179(1184)
  3 3na7_A HP0958; flagellar bioge  95.2     3.2 0.00011   42.8  22.1   59  481-540     8-66  (256)
  4 3na7_A HP0958; flagellar bioge  94.0     5.4 0.00019   41.1  20.3   90  492-599    97-186 (256)
  5 3vkg_A Dynein heavy chain, cyt  93.1      15  0.0005   50.4  26.9   30  208-238  1665-1694(3245)
  6 2dfs_A Myosin-5A; myosin-V, in  92.1     2.7 9.3E-05   51.8  17.2   92  488-603   987-1078(1080)
  7 3vkg_A Dynein heavy chain, cyt  89.2      50  0.0017   45.5  26.0   32  715-747  2391-2422(3245)
  8 2dfs_A Myosin-5A; myosin-V, in  88.2      17 0.00058   45.0  19.4   24  489-512  1020-1043(1080)
  9 3oja_B Anopheles plasmodium-re  84.2      19 0.00065   40.1  15.7   70  443-515   463-532 (597)
 10 3oja_B Anopheles plasmodium-re  83.6     7.3 0.00025   43.4  12.1   18  489-506   562-579 (597)
 11 2efr_A General control protein  78.2      56  0.0019   32.4  19.0  135  128-301     3-137 (155)
 12 2ocy_A RAB guanine nucleotide   72.9      78  0.0027   31.4  14.9  131   50-212    12-142 (154)
 13 3oja_A Leucine-rich immune mol  71.5      75  0.0026   34.7  15.4   63  483-545   419-481 (487)
 14 2eqb_B RAB guanine nucleotide   68.3      68  0.0023   29.8  11.8   92   77-182     3-94  (97)
 15 3q8t_A Beclin-1; autophagy, AT  65.3      41  0.0014   30.7   9.8   63  659-721     6-68  (96)
 16 3oja_A Leucine-rich immune mol  63.5 1.3E+02  0.0043   33.0  15.1   52  655-706   433-484 (487)
 17 3mq9_A Bone marrow stromal ant  56.7      72  0.0025   34.7  11.7   96  129-225   370-469 (471)
 18 2b9c_A Striated-muscle alpha t  55.7 1.2E+02  0.0042   29.5  11.9   41  162-202     8-48  (147)
 19 2fxo_A Myosin heavy chain, car  53.0 1.5E+02  0.0051   27.8  15.5   34  492-525    83-116 (129)
 20 2v71_A Nuclear distribution pr  51.7 2.1E+02  0.0073   29.2  16.5   46  435-480   104-153 (189)
 21 2e7s_A RAB guanine nucleotide   50.6      32  0.0011   33.5   6.8   75  116-207    51-125 (135)
 22 3hnw_A Uncharacterized protein  49.0      98  0.0034   29.8   9.9   59  489-547    72-130 (138)
 23 2v71_A Nuclear distribution pr  48.0 2.4E+02  0.0083   28.8  16.4  112  189-310    46-157 (189)
 24 3ghg_A Fibrinogen alpha chain;  37.9 2.8E+02  0.0096   32.4  12.8  135  334-492    50-187 (562)
 25 4erc_A Dual specificity protei  33.8      21 0.00073   32.2   2.6   35    1-36      1-36  (150)
 26 3teq_A Stromal interaction mol  30.1      51  0.0017   30.9   4.4   43  144-186    22-79  (101)
 27 3i00_A HIP-I, huntingtin-inter  28.6 2.6E+02  0.0089   26.5   9.1   64  444-517    16-79  (120)
 28 3geb_A EYES absent homolog 2;   26.5      38  0.0013   36.4   3.3   49  765-814    70-118 (274)
 29 3u1c_A Tropomyosin alpha-1 cha  26.0 2.4E+02  0.0082   25.6   8.1   61  148-208    35-95  (101)
 30 3q8t_A Beclin-1; autophagy, AT  24.8 3.9E+02   0.013   24.2  12.5   50  656-705    10-59  (96)
 31 1xri_A AT1G05000; structural g  23.9      39  0.0013   30.8   2.5   34    1-36      1-34  (151)
 32 3e5a_B Targeting protein for X  22.9      31  0.0011   27.9   1.4   20  851-870     6-25  (44)
 33 3o0z_A RHO-associated protein   22.8   6E+02    0.02   25.6  13.7  109  180-288    36-151 (168)
 34 2fxo_A Myosin heavy chain, car  21.6   5E+02   0.017   24.3  16.9   29  470-498    89-117 (129)
 35 1m1j_B Fibrinogen beta chain;   21.0 7.2E+02   0.025   28.4  12.3   54  227-280   100-160 (464)
 36 3nmd_A CGMP dependent protein   20.5 2.2E+02  0.0074   25.3   6.3   47  283-329    19-65  (72)
 37 2jee_A YIIU; FTSZ, septum, coi  20.0 4.9E+02   0.017   23.5   8.9   56  464-519    13-68  (81)

No 1  
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.62  E-value=0.00012  Score=89.58  Aligned_cols=13  Identities=15%  Similarity=0.378  Sum_probs=6.3

Q ss_pred             CCCcHHHHHHHHH
Q 002268           21 PLSDESIWKRLKE   33 (944)
Q Consensus        21 ~~~d~~iWkr~~e   33 (944)
                      +.+|.+.|..++.
T Consensus       324 ~~~d~~~f~~~~~  336 (1184)
T 1i84_S          324 AQQDDEMFQETLE  336 (1184)
T ss_dssp             TCCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHH
Confidence            3445555555443


No 2  
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.47  E-value=0.00024  Score=86.91  Aligned_cols=32  Identities=13%  Similarity=0.187  Sum_probs=0.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhHHHHHHhhhh
Q 002268          556 SLRQERDAMRDQHKRDVDSLNREREEFMNKMVH  588 (944)
Q Consensus       556 rLK~Ek~~~r~~~krelE~L~~ekEsF~~~M~h  588 (944)
                      .|..+...++..+.. +...+...-+...+|+.
T Consensus      1148 ~L~~ele~L~~~Iee-l~~vn~aq~el~~~~e~ 1179 (1184)
T 1i84_S         1148 DLSEELEALKTELED-TLDTTATQQELRGSDYK 1179 (1184)
T ss_dssp             ---------------------------------
T ss_pred             HHHHHHHHHHHHHHH-HhhHHHHHHHHHhhhcc
Confidence            344444444444432 33334444444444443


No 3  
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=95.20  E-value=3.2  Score=42.78  Aligned_cols=59  Identities=17%  Similarity=0.165  Sum_probs=41.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 002268          481 GELSVLEIKLKEELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVA  540 (944)
Q Consensus       481 ~E~~~Lq~eLKeEId~~R~Qke~L~kEae~Lk~eK~kFE~EWE~LDEKR~el~KEa~~I~  540 (944)
                      .-|+.||. +=.+|+.++++...|-++.++|..+...+......+......+.++...+.
T Consensus         8 ~~L~~LQ~-lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e   66 (256)
T 3na7_A            8 KQLIEISH-LDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNE   66 (256)
T ss_dssp             HHHHHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34555654 445888888888888888888888887777777776666666665554443


No 4  
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=93.96  E-value=5.4  Score=41.10  Aligned_cols=90  Identities=17%  Similarity=0.185  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhh
Q 002268          492 EELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVAVERVVVSKSLKDERDSLRQERDAMRDQHKRD  571 (944)
Q Consensus       492 eEId~~R~Qke~L~kEae~Lk~eK~kFE~EWE~LDEKR~el~KEa~~I~eEre~lek~~~~E~erLK~Ek~~~r~~~kre  571 (944)
                      .||+........+..+.-++-...+..+.+++.+....+.++.                  +.+.++.+.++.-..+..+
T Consensus        97 kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~------------------~l~~~~~~~~~~~~e~~~e  158 (256)
T 3na7_A           97 IEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEK------------------LALELESLVENEVKNIKET  158 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHH
Confidence            4444555555555555555444444444444444443333333                  3334445555666667777


Q ss_pred             hhhhhhhHHHHHHhhhhhhhhHHHHHHH
Q 002268          572 VDSLNREREEFMNKMVHEHSEWFTKIQQ  599 (944)
Q Consensus       572 lE~L~~ekEsF~~~M~hE~s~~~ek~q~  599 (944)
                      +..|.-.|+.|...|...=...+++|-.
T Consensus       159 ~~~l~~~r~~l~~~i~~~lL~~Yerir~  186 (256)
T 3na7_A          159 QQIIFKKKEDLVEKTEPKIYSFYERIRR  186 (256)
T ss_dssp             HHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            8888888888888888666666665543


No 5  
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.10  E-value=15  Score=50.44  Aligned_cols=30  Identities=10%  Similarity=0.003  Sum_probs=15.2

Q ss_pred             HhHhhhhhhhHHHHHHHHHhchHHHHHHhHH
Q 002268          208 IASFKADCEEKEREIIRERQSLSDRKKILQQ  238 (944)
Q Consensus       208 rlSf~~e~ea~e~~~~~qre~L~eweK~Lqe  238 (944)
                      ..+|.+.++.+.=++.+- =++.+|..-|+.
T Consensus      1665 LAa~i~~~~vfqi~i~k~-Y~~~~f~eDLk~ 1694 (3245)
T 3vkg_A         1665 FVAWMNGLSIYTIKVNNN-YKSSDFDDDLRM 1694 (3245)
T ss_dssp             HHHHHTTCEEECCC-----CCHHHHHHHHHH
T ss_pred             HHHHHhCCeeEEEeeeCC-CCHHHHHHHHHH
Confidence            456777777666555432 235566555543


No 6  
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=92.11  E-value=2.7  Score=51.81  Aligned_cols=92  Identities=17%  Similarity=0.314  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 002268          488 IKLKEELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVAVERVVVSKSLKDERDSLRQERDAMRDQ  567 (944)
Q Consensus       488 ~eLKeEId~~R~Qke~L~kEae~Lk~eK~kFE~EWE~LDEKR~el~KEa~~I~eEre~lek~~~~E~erLK~Ek~~~r~~  567 (944)
                      ..|.++|+..+.+-..+.+|-+.|++.......   .|.+|-..|++                  |-..|++..+++...
T Consensus       987 ~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~---~L~~kv~~L~~------------------e~~~L~qq~~~l~~~ 1045 (1080)
T 2dfs_A          987 LSLQEEIAKLRKELHQTQTEKKTIEEWADKYKH---ETEQLVSELKE------------------QNTLLKTEKEELNRR 1045 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH------------------HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH------------------HHHHHHHHHHHHHHH
Confidence            344555555555555555555555444333331   22233333333                  445555555555555


Q ss_pred             HHhhhhhhhhhHHHHHHhhhhhhhhHHHHHHHHHHH
Q 002268          568 HKRDVDSLNREREEFMNKMVHEHSEWFTKIQQERAD  603 (944)
Q Consensus       568 ~krelE~L~~ekEsF~~~M~hE~s~~~ek~q~Erad  603 (944)
                      +...-+.+.   +.+-..|++++..+..-...||+.
T Consensus      1046 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1080)
T 2dfs_A         1046 IHDQAKEIT---ETMEKKLVEETKQLELDLNDERLR 1078 (1080)
T ss_dssp             HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            544444333   566777777777777666666664


No 7  
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=89.15  E-value=50  Score=45.54  Aligned_cols=32  Identities=22%  Similarity=0.215  Sum_probs=17.9

Q ss_pred             hHHHHHHHHHhhhhhhHHhHHhHHhHhhhhhcc
Q 002268          715 REEIQAESERLKKLEDLKIAVDYMAVSEMQRSR  747 (944)
Q Consensus       715 Re~f~~~vE~lK~ckncg~~~~~~vLsdlq~s~  747 (944)
                      -..|-..-+.++.+-.-|-++ .|+++||.+-+
T Consensus      2391 e~~I~~~R~~YrpvA~r~s~L-yF~i~dL~~i~ 2422 (3245)
T 3vkg_A         2391 MQEISEVSALYNPMALSCSRV-YFAMEELSQFH 2422 (3245)
T ss_dssp             HHHHHHHHHHSHHHHHHHHHH-HHHHTGGGGST
T ss_pred             HHHHHHHHHHhHHHHHHHHHH-HHHHHHHhcCC
Confidence            344555555666655555444 67777776543


No 8  
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=88.16  E-value=17  Score=44.98  Aligned_cols=24  Identities=17%  Similarity=0.268  Sum_probs=10.5

Q ss_pred             HHHHHHHHHHHHHHHhHHhhHHHH
Q 002268          489 KLKEELDVVRAQKLELMVETDKLQ  512 (944)
Q Consensus       489 eLKeEId~~R~Qke~L~kEae~Lk  512 (944)
                      .|.+.|..+..+...|....|+|.
T Consensus      1020 ~L~~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A         1020 ETEQLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444444444444444444444


No 9  
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=84.17  E-value=19  Score=40.06  Aligned_cols=70  Identities=11%  Similarity=0.107  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHH
Q 002268          443 EEVNIIKSDLQKSLSSLDEKKKQVNCAKDKLEAMKSEAGELSVLEIKLKEELDVVRAQKLELMVETDKLQLEK  515 (944)
Q Consensus       443 Eel~~lK~dlEK~~a~~e~q~~qi~ee~e~Lkite~Er~E~~~Lq~eLKeEId~~R~Qke~L~kEae~Lk~eK  515 (944)
                      .++..++.++...-+.+......|....+.+.+.+++..+   ....|++++.+.+.....+..+...++++.
T Consensus       463 ~~i~~l~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  532 (597)
T 3oja_B          463 AEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYRLPKDGLAR---SSDNLNKVFTHLKERQAFKLRETQARRTEA  532 (597)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSSC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCccccccCC---HHHHHHHHHHHHHhhhhhhHHHHHHHHHhh
Confidence            4555555555555556666666666666665555433322   224455555555555444444444444433


No 10 
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=83.64  E-value=7.3  Score=43.37  Aligned_cols=18  Identities=22%  Similarity=0.344  Sum_probs=7.5

Q ss_pred             HHHHHHHHHHHHHHHhHH
Q 002268          489 KLKEELDVVRAQKLELMV  506 (944)
Q Consensus       489 eLKeEId~~R~Qke~L~k  506 (944)
                      +|++|+...+.+...|+.
T Consensus       562 ~l~~e~~~~~~~~~~l~~  579 (597)
T 3oja_B          562 ELRQETSLKRQKVKQLEA  579 (597)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            334444444444444433


No 11 
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=78.21  E-value=56  Score=32.35  Aligned_cols=135  Identities=16%  Similarity=0.150  Sum_probs=73.0

Q ss_pred             HhHHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhhhhHHHHHHhcchhHHhhhHHHHhhhhhHHHHH
Q 002268          128 ASLEKAVHEIRAESAETKVAADSKFAEARCMVENAQKKFAEAEAKLHAAESLQAEANRYHRSAERKLQEVVAREDDLSRR  207 (944)
Q Consensus       128 adLEKAL~emr~E~AeiK~~sesKlaeA~aLv~~~eeKs~evE~Kl~aAea~~AEa~Rk~s~~erkL~evEaRE~~Lrre  207 (944)
                      ..||.-|++. ++-|.      .|..++..    ++.-+..+|.++.+|+++..+.---...+...|+.+++++..-...
T Consensus         3 ~~lE~qlkea-ae~ad------~KyeEvaR----~E~dLEraEERae~aE~k~~eLEeeL~~v~~nlKsLE~seekasqr   71 (155)
T 2efr_A            3 KQLEDKVEEL-LSKNY------HLENEVAR----LKKLLERAEERAELSEGKSAELEEELKTVTNNLKSLEAQAEKYSQK   71 (155)
T ss_dssp             HHHHHHHHHH-HHHHH------HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHhH------HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHHHH
Confidence            4577777777 45444      44446555    6666667778888888776666555556666666666655432211


Q ss_pred             HhHhhhhhhhHHHHHHHHHhchHHHHHHhHHHHHHHHHHhhhhhhhhHhhhhhHHHHhHhHHHHHHHhhcHHHHHHHHhh
Q 002268          208 IASFKADCEEKEREIIRERQSLSDRKKILQQEHERLLDAQTLLNEREDHILSKLQELSRKEKELEASRANVEEKFKALNE  287 (944)
Q Consensus       208 rlSf~~e~ea~e~~~~~qre~L~eweK~Lqe~eerl~e~q~~lNqREe~~~e~~~~l~~kEkeLEe~~~kie~~~~~Lk~  287 (944)
                             -+.|+.+|       ....-+|.+.+.|.-              .-.+.+..+++.++.+.-.+.......+.
T Consensus        72 -------Ed~yEeqI-------k~L~~kLKEAE~RAE--------------~AERsv~kLEk~id~lEd~L~~~Kek~~~  123 (155)
T 2efr_A           72 -------EDKYEEEI-------KVLSDKLKEAETRAE--------------FAERSVTKLEKSIDDLEDELYAQKLKYKA  123 (155)
T ss_dssp             -------HHHHHHHH-------HHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHH-------HHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   11222222       223334444444443              34444555555555555555555555555


Q ss_pred             hhhhhhHhHHHHhh
Q 002268          288 EKSNLDLTLVSLLK  301 (944)
Q Consensus       288 ke~dl~~r~~~l~~  301 (944)
                      -...|...+..|+.
T Consensus       124 i~~eLd~tl~el~~  137 (155)
T 2efr_A          124 ISEEMKQLEDKVEE  137 (155)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            55555566665554


No 12 
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=72.89  E-value=78  Score=31.43  Aligned_cols=131  Identities=18%  Similarity=0.266  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHhhHhhhhhhhhHHHHHHh
Q 002268           50 IAYIAKLETEIFEHQHHMGLLILEKKELASKYEQIKASAEAAELLQKHDRASHLSAIAEARKREESLKKTLGVEKECIAS  129 (944)
Q Consensus        50 ia~IskLE~ElydYQynMGLLLiEkKEwtSK~eel~qa~~eae~~lKREqaahl~ALsEaeKREEnLkKALgvEKqCVad  129 (944)
                      |.+.+.||-+|..-.++....    +.=.+.|+.++.-+....           +-++.+..--.-|..+|.-|+.--..
T Consensus        12 in~qs~LeD~L~~~R~el~~~----~~ri~~lE~~r~~~~~l~-----------~~~~~~~~e~~~L~~~l~~E~~~R~~   76 (154)
T 2ocy_A           12 VDKQSHLEEQLNKSLKTIASQ----KAAIENYNQLKEDYNTLK-----------RELSDRDDEVKRLREDIAKENELRTK   76 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH----HHHHHTTHHHHHHHHHHH-----------THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhccHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH-----------HHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence            566677777776665554322    122233333333322211           11233333334455666666666666


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhhhhHHHHHHhcchhHHhhhHHHHhhhhhHHHHHHh
Q 002268          130 LEKAVHEIRAESAETKVAADSKFAEARCMVENAQKKFAEAEAKLHAAESLQAEANRYHRSAERKLQEVVAREDDLSRRIA  209 (944)
Q Consensus       130 LEKAL~emr~E~AeiK~~sesKlaeA~aLv~~~eeKs~evE~Kl~aAea~~AEa~Rk~s~~erkL~evEaRE~~Lrrerl  209 (944)
                      .|+....|..|.-+.   +-|=|.+||.||+.+...-.              .+-++...+...|.+.+.+-+.|+.+.-
T Consensus        77 aE~~~~~ie~ElEeL---TasLFeEAN~MVa~ar~~~~--------------~~e~r~~~L~~ql~e~~~~l~~lq~ql~  139 (154)
T 2ocy_A           77 AEEEADKLNKEVEDL---TASLFDEANNMVADARKEKY--------------AIEILNKRLTEQLREKDTLLDTLTLQLK  139 (154)
T ss_dssp             HHTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777777777777763   33568999999987644433              3444555566666666666666665544


Q ss_pred             Hhh
Q 002268          210 SFK  212 (944)
Q Consensus       210 Sf~  212 (944)
                      .++
T Consensus       140 ~LK  142 (154)
T 2ocy_A          140 NLK  142 (154)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433


No 13 
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=71.49  E-value=75  Score=34.72  Aligned_cols=63  Identities=8%  Similarity=-0.039  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 002268          483 LSVLEIKLKEELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVAVERVV  545 (944)
Q Consensus       483 ~~~Lq~eLKeEId~~R~Qke~L~kEae~Lk~eK~kFE~EWE~LDEKR~el~KEa~~I~eEre~  545 (944)
                      +..+.+++-.|++..++.......+.+.|++++++-+++-+.+|..-++..-...+...+...
T Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  481 (487)
T 3oja_A          419 YEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQN  481 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHHHHHH
Confidence            333444455555555555555566666666666666666666666555555555555444433


No 14 
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=68.29  E-value=68  Score=29.84  Aligned_cols=92  Identities=22%  Similarity=0.233  Sum_probs=59.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHhhHhhhhhhhhHHHHHHhHHHHHHHHHhhhhhhhhhhhhhhhHHH
Q 002268           77 LASKYEQIKASAEAAELLQKHDRASHLSAIAEARKREESLKKTLGVEKECIASLEKAVHEIRAESAETKVAADSKFAEAR  156 (944)
Q Consensus        77 wtSK~eel~qa~~eae~~lKREqaahl~ALsEaeKREEnLkKALgvEKqCVadLEKAL~emr~E~AeiK~~sesKlaeA~  156 (944)
                      +.+.|+.++..+...+.-++.           ++.--.-|...|.-|+.--...|.....|..|.-+.   +-|=|.+||
T Consensus         3 ~~~~~e~lre~l~~le~~~~~-----------~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeL---TasLFeEAN   68 (97)
T 2eqb_B            3 LGSNYNQLKEDYNTLKRELSD-----------RDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDL---TASLFDEAN   68 (97)
T ss_dssp             --CCHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence            345566666666666533322           344444466666666666667788888888877773   335689999


Q ss_pred             HHHHHHhhhhHHHHHhhhhhhHHHHH
Q 002268          157 CMVENAQKKFAEAEAKLHAAESLQAE  182 (944)
Q Consensus       157 aLv~~~eeKs~evE~Kl~aAea~~AE  182 (944)
                      .||+.+......++.|...-.+-+++
T Consensus        69 ~MVa~ar~e~~~~e~kn~~L~~qL~d   94 (97)
T 2eqb_B           69 NMVADARKEKYAIEILNKRLTEQLRE   94 (97)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999977777777766655555544


No 15 
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=65.31  E-value=41  Score=30.65  Aligned_cols=63  Identities=16%  Similarity=0.320  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 002268          659 LEQVTLEIKRLDLERMEINMDRQRRDREWAELNNSIEELMVQRQKLEEQRQLLHADREEIQAE  721 (944)
Q Consensus       659 ~E~v~lE~~rLe~Er~Ei~~~ke~le~e~~Em~kdIeeL~~ls~KLk~QRE~~~~eRe~f~~~  721 (944)
                      ++.+..++..|..|-..+...-..++.+.+.+...|..|...+..|..+-+.|.++++.|..+
T Consensus         6 ~~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~q   68 (96)
T 3q8t_A            6 SEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQ   68 (96)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            345556666666777777777777888888888899999999999999999999999888543


No 16 
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=63.49  E-value=1.3e+02  Score=32.95  Aligned_cols=52  Identities=21%  Similarity=0.258  Sum_probs=27.2

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHhhHHHHHHHHHHHHH
Q 002268          655 AEKELEQVTLEIKRLDLERMEINMDRQRRDREWAELNNSIEELMVQRQKLEE  706 (944)
Q Consensus       655 a~kE~E~v~lE~~rLe~Er~Ei~~~ke~le~e~~Em~kdIeeL~~ls~KLk~  706 (944)
                      +.+.|+.++.+..++..|...+...-..++.+.++++...-.++++...|-.
T Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (487)
T 3oja_A          433 AIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNLAS  484 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHHHHHHHHH
Confidence            3444444444444444444444444445556666666666666665555543


No 17 
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=56.71  E-value=72  Score=34.72  Aligned_cols=96  Identities=17%  Similarity=0.221  Sum_probs=58.3

Q ss_pred             hHHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhhhhHHHHHHhcchhHHhhhH----HHHhhhhhHH
Q 002268          129 SLEKAVHEIRAESAETKVAADSKFAEARCMVENAQKKFAEAEAKLHAAESLQAEANRYHRSAERKL----QEVVAREDDL  204 (944)
Q Consensus       129 dLEKAL~emr~E~AeiK~~sesKlaeA~aLv~~~eeKs~evE~Kl~aAea~~AEa~Rk~s~~erkL----~evEaRE~~L  204 (944)
                      +.+.||.++......+ +..-.+-++|.....-+++++.++...+..+++..+-|||.--.+.-+|    -.-++|-..|
T Consensus       370 t~eeal~~~~~~i~~~-l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (471)
T 3mq9_A          370 TVDEALKDAQTRITAA-RDGLRAVMEARNVTHLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEEL  448 (471)
T ss_dssp             CHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH-HHhhHHHHHhhhHHHHHHHHHHHHhhhHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566666666555443 3333456688888999999999999999999999999999754443333    2223333333


Q ss_pred             HHHHhHhhhhhhhHHHHHHHH
Q 002268          205 SRRIASFKADCEEKEREIIRE  225 (944)
Q Consensus       205 rrerlSf~~e~ea~e~~~~~q  225 (944)
                      .-++..++.+.+..++++..+
T Consensus       449 ~~~~~~~~~~~~~~~~~~~~~  469 (471)
T 3mq9_A          449 EGEITTLNHKLQDASAEVERL  469 (471)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            333444444444444444333


No 18 
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=55.71  E-value=1.2e+02  Score=29.46  Aligned_cols=41  Identities=20%  Similarity=0.311  Sum_probs=25.9

Q ss_pred             HhhhhHHHHHhhhhhhHHHHHHhcchhHHhhhHHHHhhhhh
Q 002268          162 AQKKFAEAEAKLHAAESLQAEANRYHRSAERKLQEVVARED  202 (944)
Q Consensus       162 ~eeKs~evE~Kl~aAea~~AEa~Rk~s~~erkL~evEaRE~  202 (944)
                      +++.+.-++..|..|-.++.+|.-...+.+|..+-++.|..
T Consensus         8 lEeeLer~eerl~~a~~kLeeaek~adE~eR~~k~lE~r~~   48 (147)
T 2b9c_A            8 VEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQ   48 (147)
T ss_dssp             ---CCGGGGTTTTHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            34444556666777777777777777777777766666654


No 19 
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=53.03  E-value=1.5e+02  Score=27.84  Aligned_cols=34  Identities=15%  Similarity=0.137  Sum_probs=15.6

Q ss_pred             HHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhh
Q 002268          492 EELDVVRAQKLELMVETDKLQLEKAKFEAEWEMI  525 (944)
Q Consensus       492 eEId~~R~Qke~L~kEae~Lk~eK~kFE~EWE~L  525 (944)
                      ..|..+-.+.+........|...|.+.+.++..|
T Consensus        83 ~~l~el~~rleeeee~~~~L~~~kkkle~e~~~L  116 (129)
T 2fxo_A           83 AKVKEMNKRLEDEEEMNAELTAKKRKLEDECSEL  116 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333344444444444444555555555554444


No 20 
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=51.73  E-value=2.1e+02  Score=29.18  Aligned_cols=46  Identities=26%  Similarity=0.377  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----hhhhhHHHHHHHHHHHhhhhhhhhhh
Q 002268          435 KSLLQKEKEEVNIIKSDLQK----SLSSLDEKKKQVNCAKDKLEAMKSEA  480 (944)
Q Consensus       435 k~~L~~ekEel~~lK~dlEK----~~a~~e~q~~qi~ee~e~Lkite~Er  480 (944)
                      +..|....-+|...++|+|.    .-+++++-..+.+.+.|+...+++|=
T Consensus       104 ~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El  153 (189)
T 2v71_A          104 KEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESEL  153 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            33334444444444444443    23445555556666666666655443


No 21 
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=50.62  E-value=32  Score=33.54  Aligned_cols=75  Identities=21%  Similarity=0.257  Sum_probs=42.8

Q ss_pred             hhhhhhhHHHHHHhHHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhhhhHHHHHHhcchhHHhhhHH
Q 002268          116 LKKTLGVEKECIASLEKAVHEIRAESAETKVAADSKFAEARCMVENAQKKFAEAEAKLHAAESLQAEANRYHRSAERKLQ  195 (944)
Q Consensus       116 LkKALgvEKqCVadLEKAL~emr~E~AeiK~~sesKlaeA~aLv~~~eeKs~evE~Kl~aAea~~AEa~Rk~s~~erkL~  195 (944)
                      |..+|.-|+.--...|.....|..|.-+.   +-|=|.+||.||+.+......++              ++...+.+.|.
T Consensus        51 L~~~l~eE~~~R~~aE~~~~~ie~ElE~L---TasLFeEAN~MVa~ar~~~~~~e--------------~r~~~L~~ql~  113 (135)
T 2e7s_A           51 LREDIAKENELRTKAEEEADKLNKEVEDL---TASLFDEANNLVADARMEKYAIE--------------ILNKRLTEQLR  113 (135)
T ss_dssp             HHHHHHHTTSHHHHHHHTTHHHHHHHHHH---HHHHHHHHHHHHHHTTHHHHHHH--------------HHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHH
Confidence            55555555555555666667777666663   23568999999988755444444              44455555555


Q ss_pred             HHhhhhhHHHHH
Q 002268          196 EVVAREDDLSRR  207 (944)
Q Consensus       196 evEaRE~~Lrre  207 (944)
                      +.+++-+.|+.+
T Consensus       114 e~e~ll~~lq~Q  125 (135)
T 2e7s_A          114 EKDMLLDTLTLQ  125 (135)
T ss_dssp             HHHHCC------
T ss_pred             HHHHHHHHHHHH
Confidence            555555555444


No 22 
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=48.97  E-value=98  Score=29.84  Aligned_cols=59  Identities=19%  Similarity=0.090  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 002268          489 KLKEELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVAVERVVVS  547 (944)
Q Consensus       489 eLKeEId~~R~Qke~L~kEae~Lk~eK~kFE~EWE~LDEKR~el~KEa~~I~eEre~le  547 (944)
                      +++++++.++.+...+.+|..+||.+....-..-+.+...-++|+++......+-..++
T Consensus        72 k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le  130 (138)
T 3hnw_A           72 KAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLE  130 (138)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566677777777777777777776666655555555555555555555554444443


No 23 
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=48.03  E-value=2.4e+02  Score=28.77  Aligned_cols=112  Identities=16%  Similarity=0.224  Sum_probs=47.3

Q ss_pred             HHhhhHHHHhhhhhHHHHHHhHhhhhhhhHHHHHHHHHhchHHHHHHhHHHHHHHHHHhhhhhhhhHhhhhhHHHHhHhH
Q 002268          189 SAERKLQEVVAREDDLSRRIASFKADCEEKEREIIRERQSLSDRKKILQQEHERLLDAQTLLNEREDHILSKLQELSRKE  268 (944)
Q Consensus       189 ~~erkL~evEaRE~~LrrerlSf~~e~ea~e~~~~~qre~L~eweK~Lqe~eerl~e~q~~lNqREe~~~e~~~~l~~kE  268 (944)
                      +++..|..++.|...|+.....+..|++....-+..+.   +++-+.....+..+...+    .--..+...-+.|.+..
T Consensus        46 ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~---~e~~~~~~~Lq~el~~l~----~~~~~l~~~ireLEq~N  118 (189)
T 2v71_A           46 ELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQY---AQSYKQVSVLEDDLSQTR----AIKEQLHKYVRELEQAN  118 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHh
Confidence            34445555555555555555555555555544433322   222222222222222221    11122222333344444


Q ss_pred             HHHHHHhhcHHHHHHHHhhhhhhhhHhHHHHhhhHHHHHHHH
Q 002268          269 KELEASRANVEEKFKALNEEKSNLDLTLVSLLKREEAVIERE  310 (944)
Q Consensus       269 keLEe~~~kie~~~~~Lk~ke~dl~~r~~~l~~rEe~~~~~~  310 (944)
                      -+||.+...   ...+|.+-+..++.-|...+.=|-+++.+.
T Consensus       119 DdlEr~~R~---~~~SleD~e~kln~aiEr~alLE~El~EKe  157 (189)
T 2v71_A          119 DDLERAKRA---TIMSLEDFEQRLNQAIERNAFLESELDEKE  157 (189)
T ss_dssp             HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444433333   233344444555555555555555555433


No 24 
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=37.93  E-value=2.8e+02  Score=32.44  Aligned_cols=135  Identities=12%  Similarity=0.083  Sum_probs=73.4

Q ss_pred             HHHHHHHHhHHHHhhhhhhHHHHH---HHHhhhHHHHHHHHHHHHHhhhhhhhhhHHHHHhhhhhHHHhHHHHHHhhhhH
Q 002268          334 EIQKIIANHESALRVKQSEFEAEL---AIKYKLAEDEIEKKRRAWELRDLDLGQREESLLEREHDLEVQSRALVDKEKDL  410 (944)
Q Consensus       334 eIQkLldeh~a~L~~Kk~eFElEl---e~krKs~eeEle~K~~~~E~rEvel~h~Eekl~kREqaLe~k~~~lkeKEkdl  410 (944)
                      +||-||+.|+--|..+..++=.++   .+.+++.+.=+..+...|..+-......+..+.+--.+|+.+...|+++    
T Consensus        50 rLQglLdkqErDltkrINELKnqLEdlsKnsKdseqy~k~~~E~Lr~rq~q~~dNdNtynE~S~ELRRrIqyLKek----  125 (562)
T 3ghg_A           50 RMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRK----  125 (562)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTHHHHHHHHHHHHH----
T ss_pred             chhhhHHhhcCcHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH----
Confidence            689999999988887777665544   4456666666777777776666665555555555555555554444432    


Q ss_pred             HHHhhhhHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHH
Q 002268          411 VERSHLLEEKENKLIAFEKEADLKKSLLQKEKEEVNIIKSDLQKSLSSLDEKKKQVNCAKDKLEAMKSEAGELSVLEIKL  490 (944)
Q Consensus       411 ~~Ksk~LkEkEksL~aeEK~le~ek~~L~~ekEel~~lK~dlEK~~a~~e~q~~qi~ee~e~Lkite~Er~E~~~Lq~eL  490 (944)
                                          |..+..+|..=+-.|..+-.+|+++-+.|..|..--.--+.+-=.-+=+...|.-+|-+|
T Consensus       126 --------------------VdnQlsnIrvLQsnLedq~~kIQRLEvDIdiqirsCKgsCsr~~~~~vd~~sY~~~QKQL  185 (562)
T 3ghg_A          126 --------------------VIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQL  185 (562)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTBSCCCCCCCCHHHHHHHHHHH
T ss_pred             --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchheeecchHHHHHHHHHH
Confidence                                222222222222333334444445555555554443333444334444555565555555


Q ss_pred             HH
Q 002268          491 KE  492 (944)
Q Consensus       491 Ke  492 (944)
                      .|
T Consensus       186 eQ  187 (562)
T 3ghg_A          186 EQ  187 (562)
T ss_dssp             HH
T ss_pred             HH
Confidence            43


No 25 
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=33.79  E-value=21  Score=32.16  Aligned_cols=35  Identities=14%  Similarity=0.157  Sum_probs=29.4

Q ss_pred             CCCCCCCcccccCCCccccCCCC-cHHHHHHHHHccC
Q 002268            1 MASPSSGRLAITPSSRVLQSPLS-DESIWKRLKEAGL   36 (944)
Q Consensus         1 ~~~p~~~~l~~~~~~rv~~~~~~-d~~iWkr~~eaG~   36 (944)
                      |+.||.+--.|+||. +.+++.+ ...++..|+..|+
T Consensus         1 m~~pp~~~~~i~~~~-l~~~~~p~~~~~~~~L~~~gi   36 (150)
T 4erc_A            1 MGVQPPNFSWVLPGR-LAGLALPRLPAHYQFLLDLGV   36 (150)
T ss_dssp             CCCCCTTCEEEETTT-EEEESCCCSHHHHHHHHHTTE
T ss_pred             CCCCCCCCEEeccCc-eeeecCCCCHHHHHHHHHCCC
Confidence            889999888899984 6667776 7888999999995


No 26 
>3teq_A Stromal interaction molecule 1; signaling protein; 1.90A {Homo sapiens}
Probab=30.07  E-value=51  Score=30.88  Aligned_cols=43  Identities=23%  Similarity=0.271  Sum_probs=33.5

Q ss_pred             hhhhhhhhhhHHHHHHHHHhhh---------------hHHHHHhhhhhhHHHHHHhcc
Q 002268          144 TKVAADSKFAEARCMVENAQKK---------------FAEAEAKLHAAESLQAEANRY  186 (944)
Q Consensus       144 iK~~sesKlaeA~aLv~~~eeK---------------s~evE~Kl~aAea~~AEa~Rk  186 (944)
                      -|.+|+.+|..|..-++.+.+|               +.+||.++++|...+.++.+-
T Consensus        22 kk~~aekql~~A~e~~eKl~KKrsS~~gs~~~ahs~slD~vD~~Il~Ak~aL~evt~~   79 (101)
T 3teq_A           22 KKQNAEKQLMVAKEGAEKIKKKRNTLFGTFHVAHSSSLDDVDHKILTAKQALSEATAA   79 (101)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHTCGGGGGTTCHHHHHHHHHHHHHHH
T ss_pred             hhccHHHHHHHHHHHHHHHHHhhhchheeeehhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            4578889999999999999998               346777777777777776653


No 27 
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=28.56  E-value=2.6e+02  Score=26.54  Aligned_cols=64  Identities=11%  Similarity=0.131  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHHHH
Q 002268          444 EVNIIKSDLQKSLSSLDEKKKQVNCAKDKLEAMKSEAGELSVLEIKLKEELDVVRAQKLELMVETDKLQLEKAK  517 (944)
Q Consensus       444 el~~lK~dlEK~~a~~e~q~~qi~ee~e~Lkite~Er~E~~~Lq~eLKeEId~~R~Qke~L~kEae~Lk~eK~k  517 (944)
                      .|..|+.+|+..+..++.=+.........|+--      .    +.|.-|++..|+++.....|.+.|+.+.+.
T Consensus        16 ~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~------i----~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~   79 (120)
T 3i00_A           16 LIERLYREISGLKAQLENMKTESQRVVLQLKGH------V----SELEADLAEQQHLRQQAADDCEFLRAELDE   79 (120)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            355566666666665554433333333333211      1    456677788888888888888888876653


No 28 
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=26.53  E-value=38  Score=36.38  Aligned_cols=49  Identities=14%  Similarity=0.239  Sum_probs=22.6

Q ss_pred             ccccccCCCCCccccccCCCCCCCCcccccccccCCCCCcchhHHHHHHH
Q 002268          765 TSLAHADLGSDQKFDVTNNGDRFNTPSVQKTASASPPSLARFSWIKRFAD  814 (944)
Q Consensus       765 ~~~~~~~~~~~~~~~~~n~~d~~~sp~~~~~~~~SP~s~~~~SWlrKCts  814 (944)
                      ..+...+.++|+.+..- +.|||.+|+...+....|++-|-|-|+||-|-
T Consensus        70 ddv~~dDnGqDLs~y~f-~~dgf~~~~~~~~lc~~~gvrggvDWmRKLAf  118 (274)
T 3geb_A           70 DDVSSDDNGQDLSTYNF-SADGFHSSAPGANLCLGSGVHGGVDWMRKLAF  118 (274)
T ss_dssp             TTTGGGCCCCCCSSCCS-SSSCC----------------CCSSHHHHHHH
T ss_pred             hhhhccCCccccccccc-ccccCCCCCccccccccccccchhHHHHHHHH
Confidence            34445666677665533 46889998765543445666688999999864


No 29 
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=26.01  E-value=2.4e+02  Score=25.63  Aligned_cols=61  Identities=15%  Similarity=0.100  Sum_probs=46.2

Q ss_pred             hhhhhhHHHHHHHHHhhhhHHHHHhhhhhhHHHHHHhcchhHHhhhHHHHhhhhhHHHHHH
Q 002268          148 ADSKFAEARCMVENAQKKFAEAEAKLHAAESLQAEANRYHRSAERKLQEVVAREDDLSRRI  208 (944)
Q Consensus       148 sesKlaeA~aLv~~~eeKs~evE~Kl~aAea~~AEa~Rk~s~~erkL~evEaRE~~Lrrer  208 (944)
                      ++.....+-.=|.+++.|..-+|.-|-.+...+.+++.+..+.+....+.|+--.+|.|.+
T Consensus        35 ~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~Rri   95 (101)
T 3u1c_A           35 AEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRI   95 (101)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445556667778888888888888888888888888888888888887777777776654


No 30 
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=24.78  E-value=3.9e+02  Score=24.19  Aligned_cols=50  Identities=20%  Similarity=0.318  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhhhhhhhhHHHHHHHhhHHHHHHHHHHHH
Q 002268          656 EKELEQVTLEIKRLDLERMEINMDRQRRDREWAELNNSIEELMVQRQKLE  705 (944)
Q Consensus       656 ~kE~E~v~lE~~rLe~Er~Ei~~~ke~le~e~~Em~kdIeeL~~ls~KLk  705 (944)
                      ..++..+..+-.+|-.|=.++..++..++.+..........|.....+.-
T Consensus        10 ~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w   59 (96)
T 3q8t_A           10 QRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQ   59 (96)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            33444444444444444444444444444444444444444444443333


No 31 
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=23.85  E-value=39  Score=30.84  Aligned_cols=34  Identities=18%  Similarity=0.263  Sum_probs=28.4

Q ss_pred             CCCCCCCcccccCCCccccCCCCcHHHHHHHHHccC
Q 002268            1 MASPSSGRLAITPSSRVLQSPLSDESIWKRLKEAGL   36 (944)
Q Consensus         1 ~~~p~~~~l~~~~~~rv~~~~~~d~~iWkr~~eaG~   36 (944)
                      |-.||.+--.|+||  +.+++..+..+|..|+..|+
T Consensus         1 ~~~pp~n~~~v~~~--l~~s~~~~~~d~~~L~~~gi   34 (151)
T 1xri_A            1 HLIPPLNFSMVDNG--IFRSGFPDSANFSFLQTLGL   34 (151)
T ss_dssp             CBCCCTTCEEEETT--EEEESCCCHHHHHHHHHHTC
T ss_pred             CccCCcCcCeeCCC--eEECCCcCccCHHHHHHCCC
Confidence            44577776679998  88999989999999999996


No 32 
>3e5a_B Targeting protein for XKLP2; aurora A, serine/threonine-protein kinase, cofactor, TPX2, V inhibitor, phosphorylation, ATP-binding, cell cycle; HET: TPO VX6; 2.30A {Homo sapiens} PDB: 3ha6_B* 1ol5_B*
Probab=22.89  E-value=31  Score=27.91  Aligned_cols=20  Identities=20%  Similarity=0.463  Sum_probs=14.9

Q ss_pred             cccccCCCCceeccCCCchh
Q 002268          851 PVRYSFGEPKVILEVPSENE  870 (944)
Q Consensus       851 p~~~~~~e~~vi~evps~~~  870 (944)
                      ++.|||++|+-.+-.+|+++
T Consensus         6 ~~sYSfDaPt~finFtsl~~   25 (44)
T 3e5a_B            6 KSSYSYDAPSDFINFSSLDD   25 (44)
T ss_dssp             -CCCCCSSCCBCCCTTC---
T ss_pred             ccceeccCCccccccccccc
Confidence            56799999999999999976


No 33 
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=22.78  E-value=6e+02  Score=25.60  Aligned_cols=109  Identities=17%  Similarity=0.187  Sum_probs=0.0

Q ss_pred             HHHHhcchhHHhhhHHHHhhhhhHHHHHHhHhhhhhhhHHHHHHHHHhchHHHHHHhHHHHHHHHHHhhh---hhhhhHh
Q 002268          180 QAEANRYHRSAERKLQEVVAREDDLSRRIASFKADCEEKEREIIRERQSLSDRKKILQQEHERLLDAQTL---LNEREDH  256 (944)
Q Consensus       180 ~AEa~Rk~s~~erkL~evEaRE~~LrrerlSf~~e~ea~e~~~~~qre~L~eweK~Lqe~eerl~e~q~~---lNqREe~  256 (944)
                      .||+.-..+.++....|+..+-..|+..+.++..++-..-..+.-+|.+.+-..-...+.+.|+.-.+.=   +..|+.+
T Consensus        36 ~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k  115 (168)
T 3o0z_A           36 HTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEK  115 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH


Q ss_pred             hhhhHHHHhHhHHHHHHHhhcHH----HHHHHHhhh
Q 002268          257 ILSKLQELSRKEKELEASRANVE----EKFKALNEE  288 (944)
Q Consensus       257 ~~e~~~~l~~kEkeLEe~~~kie----~~~~~Lk~k  288 (944)
                      +..--+.|.-+=-.||-.+..++    -.+.+|...
T Consensus       116 ~~~e~r~L~Ekl~~lEKe~a~~eid~~~eLKalQ~~  151 (168)
T 3o0z_A          116 VEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQR  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH


No 34 
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=21.60  E-value=5e+02  Score=24.26  Aligned_cols=29  Identities=24%  Similarity=0.359  Sum_probs=11.0

Q ss_pred             HhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 002268          470 KDKLEAMKSEAGELSVLEIKLKEELDVVR  498 (944)
Q Consensus       470 ~e~Lkite~Er~E~~~Lq~eLKeEId~~R  498 (944)
                      .++|+-.++...++..--.+|-++|..++
T Consensus        89 ~~rleeeee~~~~L~~~kkkle~e~~~Lk  117 (129)
T 2fxo_A           89 NKRLEDEEEMNAELTAKKRKLEDECSELK  117 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333333333333333333


No 35 
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=20.99  E-value=7.2e+02  Score=28.44  Aligned_cols=54  Identities=15%  Similarity=0.076  Sum_probs=41.2

Q ss_pred             hchHHHHHHhHHHHHHHH-------HHhhhhhhhhHhhhhhHHHHhHhHHHHHHHhhcHHH
Q 002268          227 QSLSDRKKILQQEHERLL-------DAQTLLNEREDHILSKLQELSRKEKELEASRANVEE  280 (944)
Q Consensus       227 e~L~eweK~Lqe~eerl~-------e~q~~lNqREe~~~e~~~~l~~kEkeLEe~~~kie~  280 (944)
                      .+|++.+..|++..+.-.       ..+..+++++..+.++...++.....||..+..|..
T Consensus       100 ~~LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~~~~i~~  160 (464)
T 1m1j_B          100 PVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELHYNYIKD  160 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Confidence            566777777776655433       467778999999999999999999999887777753


No 36 
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=20.54  E-value=2.2e+02  Score=25.32  Aligned_cols=47  Identities=21%  Similarity=0.282  Sum_probs=38.4

Q ss_pred             HHHhhhhhhhhHhHHHHhhhHHHHHHHHHHHHHhHHhHHHHHHHHhh
Q 002268          283 KALNEEKSNLDLTLVSLLKREEAVIEREASLQKKEQKLLVSQETLAS  329 (944)
Q Consensus       283 ~~Lk~ke~dl~~r~~~l~~rEe~~~~~~~~L~~KEkeLl~leEKL~a  329 (944)
                      .++.+-+..|..+...|..++.-+..++..|..|+.++..|+-.|..
T Consensus        19 gti~eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK   65 (72)
T 3nmd_A           19 GSLRDLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK   65 (72)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666777888888889999999999999999999998888777654


No 37 
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=20.03  E-value=4.9e+02  Score=23.51  Aligned_cols=56  Identities=23%  Similarity=0.298  Sum_probs=31.8

Q ss_pred             HHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHH
Q 002268          464 KQVNCAKDKLEAMKSEAGELSVLEIKLKEELDVVRAQKLELMVETDKLQLEKAKFE  519 (944)
Q Consensus       464 ~qi~ee~e~Lkite~Er~E~~~Lq~eLKeEId~~R~Qke~L~kEae~Lk~eK~kFE  519 (944)
                      .+|..+-+....++-|=.|+-.--..|.++.+..|.....|..|...|+++...|.
T Consensus        13 ~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq   68 (81)
T 2jee_A           13 AKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQ   68 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence            34555555555555454444444455666666666666666666666666665543


Done!