Query 002270
Match_columns 944
No_of_seqs 357 out of 1615
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 19:31:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.7 2.5E-17 8.5E-22 152.6 6.6 93 715-821 4-102 (111)
2 2kwj_A Zinc finger protein DPF 99.6 8.1E-17 2.8E-21 150.7 3.5 92 719-824 2-109 (114)
3 4gne_A Histone-lysine N-methyl 99.6 3.4E-16 1.2E-20 146.1 6.0 90 712-818 9-100 (107)
4 3v43_A Histone acetyltransfera 99.6 7.6E-16 2.6E-20 143.6 3.7 92 717-821 4-110 (112)
5 3ask_A E3 ubiquitin-protein li 99.6 2.5E-15 8.5E-20 155.9 7.1 155 609-821 66-223 (226)
6 1mm2_A MI2-beta; PHD, zinc fin 99.2 2E-11 6.9E-16 103.1 5.2 50 713-762 4-55 (61)
7 2lbm_A Transcriptional regulat 99.2 1.1E-11 3.8E-16 120.9 3.7 95 648-762 13-116 (142)
8 2yql_A PHD finger protein 21A; 99.1 4.4E-11 1.5E-15 99.1 4.1 50 712-761 3-54 (56)
9 1fp0_A KAP-1 corepressor; PHD 99.1 6.1E-11 2.1E-15 107.5 5.3 48 714-761 21-70 (88)
10 1xwh_A Autoimmune regulator; P 99.1 4.7E-11 1.6E-15 102.0 3.8 48 715-762 5-54 (66)
11 3u5n_A E3 ubiquitin-protein li 99.1 6E-11 2E-15 120.7 4.2 49 713-761 2-52 (207)
12 2lri_C Autoimmune regulator; Z 99.0 7.2E-11 2.4E-15 101.6 3.7 46 716-761 10-57 (66)
13 2l5u_A Chromodomain-helicase-D 99.0 5.7E-11 2E-15 100.3 3.0 48 714-761 7-56 (61)
14 3o36_A Transcription intermedi 99.0 9.2E-11 3.2E-15 117.0 4.6 46 716-761 2-49 (184)
15 2puy_A PHD finger protein 21A; 99.0 8.1E-11 2.8E-15 98.7 3.3 48 715-762 2-51 (60)
16 2l43_A N-teminal domain from h 99.0 1.1E-10 3.7E-15 105.4 3.7 48 715-762 22-74 (88)
17 2ku3_A Bromodomain-containing 99.0 7.3E-11 2.5E-15 102.8 1.8 48 715-762 13-65 (71)
18 2yt5_A Metal-response element- 98.9 3.4E-10 1.2E-14 96.0 3.4 49 714-762 2-60 (66)
19 2e6r_A Jumonji/ARID domain-con 98.9 8.5E-10 2.9E-14 100.2 5.2 57 714-770 12-73 (92)
20 2ro1_A Transcription intermedi 98.8 1.7E-09 5.7E-14 109.3 4.5 46 718-763 2-49 (189)
21 1wev_A Riken cDNA 1110020M19; 98.8 1.2E-09 4.1E-14 98.4 2.9 47 717-763 15-72 (88)
22 1f62_A Transcription factor WS 98.7 2.7E-09 9.3E-14 86.4 2.5 42 720-761 2-48 (51)
23 2e6s_A E3 ubiquitin-protein li 98.7 1.1E-08 3.6E-13 90.5 4.4 45 717-761 25-75 (77)
24 3v43_A Histone acetyltransfera 98.7 4.5E-09 1.5E-13 98.0 2.0 42 720-761 63-110 (112)
25 2kwj_A Zinc finger protein DPF 98.6 5.7E-09 1.9E-13 97.7 1.3 42 720-761 60-106 (114)
26 2ysm_A Myeloid/lymphoid or mix 98.6 2.2E-08 7.6E-13 92.6 4.3 42 720-761 56-102 (111)
27 3ql9_A Transcriptional regulat 98.6 9.3E-09 3.2E-13 99.0 1.6 50 713-762 52-110 (129)
28 3asl_A E3 ubiquitin-protein li 98.6 1.9E-08 6.5E-13 87.3 3.1 42 720-761 20-67 (70)
29 3shb_A E3 ubiquitin-protein li 98.6 2.5E-08 8.4E-13 88.3 3.7 56 752-821 19-75 (77)
30 1wen_A Inhibitor of growth fam 98.5 5.9E-08 2E-12 84.5 5.1 44 717-761 15-63 (71)
31 3ask_A E3 ubiquitin-protein li 98.5 4.2E-08 1.5E-12 102.1 3.8 44 718-761 174-223 (226)
32 3asl_A E3 ubiquitin-protein li 98.5 5.2E-08 1.8E-12 84.5 3.6 57 751-821 10-67 (70)
33 2e6s_A E3 ubiquitin-protein li 98.5 8.3E-08 2.8E-12 84.9 4.2 54 753-820 20-74 (77)
34 1weu_A Inhibitor of growth fam 98.5 1.3E-07 4.3E-12 86.3 5.3 44 717-761 35-83 (91)
35 3shb_A E3 ubiquitin-protein li 98.4 8.2E-08 2.8E-12 85.0 3.5 42 720-761 28-75 (77)
36 2vnf_A ING 4, P29ING4, inhibit 98.4 5.2E-08 1.8E-12 82.1 1.7 44 717-761 9-57 (60)
37 2jmi_A Protein YNG1, ING1 homo 98.4 9.2E-08 3.1E-12 87.1 3.4 45 716-761 24-74 (90)
38 3c6w_A P28ING5, inhibitor of g 98.4 5.4E-08 1.8E-12 81.9 1.7 44 717-761 8-56 (59)
39 2k16_A Transcription initiatio 98.4 6.1E-08 2.1E-12 84.2 2.0 48 714-761 14-66 (75)
40 2g6q_A Inhibitor of growth pro 98.4 6.1E-08 2.1E-12 82.4 1.7 44 717-761 10-58 (62)
41 2lv9_A Histone-lysine N-methyl 98.1 1.4E-06 4.7E-11 79.9 4.5 41 720-761 32-74 (98)
42 1x4i_A Inhibitor of growth pro 97.9 3.3E-06 1.1E-10 73.4 2.0 45 717-762 5-54 (70)
43 2e6r_A Jumonji/ARID domain-con 97.8 3.7E-06 1.3E-10 76.4 1.4 56 752-821 8-64 (92)
44 1f62_A Transcription factor WS 97.8 6.3E-06 2.1E-10 66.6 1.4 46 762-821 3-48 (51)
45 1we9_A PHD finger family prote 97.7 1.4E-05 4.9E-10 67.3 3.1 46 716-761 4-56 (64)
46 2lri_C Autoimmune regulator; Z 97.6 1.6E-05 5.5E-10 68.4 1.7 34 783-821 24-57 (66)
47 2ri7_A Nucleosome-remodeling f 97.6 5.6E-06 1.9E-10 81.6 -2.0 46 716-762 6-58 (174)
48 3db3_A E3 ubiquitin-protein li 97.5 2.7E-05 9.3E-10 77.2 1.8 79 608-705 82-160 (161)
49 4bbq_A Lysine-specific demethy 97.5 9.2E-06 3.2E-10 75.4 -1.5 88 720-818 9-110 (117)
50 2xb1_A Pygopus homolog 2, B-ce 97.5 2.2E-05 7.6E-10 72.9 0.9 43 719-761 4-59 (105)
51 2puy_A PHD finger protein 21A; 97.4 3.1E-05 1.1E-09 64.8 1.3 36 782-822 16-51 (60)
52 1fp0_A KAP-1 corepressor; PHD 97.4 0.00011 3.7E-09 66.8 4.8 35 782-821 36-70 (88)
53 1mm2_A MI2-beta; PHD, zinc fin 97.4 5.1E-05 1.7E-09 64.0 2.2 35 782-821 20-54 (61)
54 1wem_A Death associated transc 97.4 2.5E-05 8.5E-10 68.1 0.3 47 714-761 12-68 (76)
55 2yql_A PHD finger protein 21A; 97.4 3.7E-05 1.3E-09 63.6 1.1 34 782-820 20-53 (56)
56 1xwh_A Autoimmune regulator; P 97.4 4.3E-05 1.5E-09 65.3 1.4 35 782-821 19-53 (66)
57 1wil_A KIAA1045 protein; ring 97.4 5.4E-05 1.8E-09 68.4 2.0 48 714-761 11-74 (89)
58 2l5u_A Chromodomain-helicase-D 97.3 5.8E-05 2E-09 63.7 1.7 35 782-821 22-56 (61)
59 1wev_A Riken cDNA 1110020M19; 97.3 3.5E-05 1.2E-09 69.4 0.3 41 781-822 31-71 (88)
60 1wew_A DNA-binding family prot 97.2 0.0001 3.5E-09 64.9 2.1 44 717-761 15-70 (78)
61 2vpb_A Hpygo1, pygopus homolog 97.2 4.5E-05 1.5E-09 65.4 -0.3 46 716-761 6-64 (65)
62 3o70_A PHD finger protein 13; 97.2 0.00021 7.1E-09 61.7 3.5 44 717-761 18-65 (68)
63 2k16_A Transcription initiatio 97.2 0.00013 4.3E-09 63.3 1.9 36 782-822 32-67 (75)
64 1wee_A PHD finger family prote 97.2 0.00014 5E-09 62.8 2.3 46 715-761 13-64 (72)
65 2yt5_A Metal-response element- 97.1 9.5E-05 3.2E-09 62.5 0.3 39 781-821 21-59 (66)
66 1wep_A PHF8; structural genomi 97.1 0.00011 3.8E-09 64.6 0.7 44 717-761 11-61 (79)
67 2ku3_A Bromodomain-containing 97.0 0.00015 5E-09 63.2 1.2 35 781-822 31-65 (71)
68 3o36_A Transcription intermedi 97.0 0.00022 7.6E-09 71.1 2.0 35 783-822 16-50 (184)
69 3u5n_A E3 ubiquitin-protein li 96.9 0.0002 6.8E-09 72.9 1.2 36 782-822 18-53 (207)
70 2rsd_A E3 SUMO-protein ligase 96.9 0.00037 1.3E-08 59.8 2.6 42 719-761 11-63 (68)
71 2kgg_A Histone demethylase jar 96.9 0.00022 7.5E-09 58.3 1.1 42 720-761 4-52 (52)
72 2l43_A N-teminal domain from h 96.9 0.00018 6E-09 65.0 0.6 34 781-821 40-73 (88)
73 2ro1_A Transcription intermedi 96.9 0.00026 8.9E-09 71.5 1.9 35 783-822 14-48 (189)
74 2lv9_A Histone-lysine N-methyl 96.6 0.00076 2.6E-08 61.8 2.3 34 782-821 41-74 (98)
75 3kqi_A GRC5, PHD finger protei 96.5 0.00072 2.4E-08 59.0 1.3 42 719-761 11-59 (75)
76 3o7a_A PHD finger protein 13 v 96.3 0.0012 4.1E-08 53.8 1.8 39 723-761 8-50 (52)
77 2jmi_A Protein YNG1, ING1 homo 96.2 0.0016 5.4E-08 59.4 2.2 36 782-823 38-76 (90)
78 3kv5_D JMJC domain-containing 96.0 0.00091 3.1E-08 76.6 -0.7 44 717-761 36-86 (488)
79 2xb1_A Pygopus homolog 2, B-ce 96.0 0.0011 3.8E-08 61.5 -0.1 54 760-822 4-60 (105)
80 3lqh_A Histone-lysine N-methyl 96.0 0.0018 6.3E-08 65.6 1.4 43 719-761 3-61 (183)
81 2lbm_A Transcriptional regulat 95.9 0.0019 6.6E-08 63.2 1.0 40 781-821 73-115 (142)
82 3pur_A Lysine-specific demethy 95.7 0.0038 1.3E-07 72.0 2.7 34 728-761 56-92 (528)
83 2vpb_A Hpygo1, pygopus homolog 95.6 0.00094 3.2E-08 57.3 -2.2 39 782-821 23-64 (65)
84 1we9_A PHD finger family prote 95.5 0.004 1.4E-07 52.3 1.5 36 782-821 21-56 (64)
85 3a1b_A DNA (cytosine-5)-methyl 95.2 0.0037 1.3E-07 62.3 0.3 49 713-761 74-132 (159)
86 2kgg_A Histone demethylase jar 95.0 0.0055 1.9E-07 50.0 0.8 48 760-820 3-51 (52)
87 1wen_A Inhibitor of growth fam 94.9 0.01 3.4E-07 51.7 2.3 33 782-821 28-63 (71)
88 4gne_A Histone-lysine N-methyl 94.9 0.0076 2.6E-07 56.4 1.5 31 782-818 26-58 (107)
89 1wee_A PHD finger family prote 94.7 0.01 3.6E-07 51.2 1.7 36 782-822 30-65 (72)
90 1weu_A Inhibitor of growth fam 94.6 0.012 4.1E-07 53.7 1.9 33 782-821 48-83 (91)
91 2vnf_A ING 4, P29ING4, inhibit 94.4 0.0083 2.9E-07 50.4 0.5 33 782-821 22-57 (60)
92 2ri7_A Nucleosome-remodeling f 94.4 0.0065 2.2E-07 59.8 -0.3 39 782-824 22-60 (174)
93 3o70_A PHD finger protein 13; 94.3 0.013 4.5E-07 50.5 1.5 34 782-821 32-65 (68)
94 3kv4_A PHD finger protein 8; e 94.3 0.0037 1.3E-07 70.9 -2.6 39 723-761 9-54 (447)
95 1x4i_A Inhibitor of growth pro 94.2 0.023 7.8E-07 49.3 2.8 35 782-823 18-55 (70)
96 3c6w_A P28ING5, inhibitor of g 94.2 0.0096 3.3E-07 50.0 0.4 33 782-821 21-56 (59)
97 2g6q_A Inhibitor of growth pro 94.2 0.012 4E-07 50.0 0.8 33 782-821 23-58 (62)
98 1wep_A PHF8; structural genomi 94.1 0.012 4.2E-07 51.6 0.8 38 781-822 25-62 (79)
99 2rsd_A E3 SUMO-protein ligase 93.8 0.021 7.2E-07 48.9 1.7 41 781-822 22-64 (68)
100 2pv0_B DNA (cytosine-5)-methyl 93.7 0.02 6.7E-07 64.0 1.8 49 713-761 88-146 (386)
101 1wil_A KIAA1045 protein; ring 93.4 0.035 1.2E-06 50.4 2.5 65 743-823 4-76 (89)
102 1wem_A Death associated transc 92.6 0.0085 2.9E-07 52.1 -2.5 40 782-822 29-69 (76)
103 3o7a_A PHD finger protein 13 v 92.4 0.035 1.2E-06 45.1 1.0 35 781-821 16-50 (52)
104 3kqi_A GRC5, PHD finger protei 92.4 0.025 8.5E-07 49.2 0.1 37 782-822 24-60 (75)
105 2ku7_A MLL1 PHD3-CYP33 RRM chi 90.8 0.052 1.8E-06 49.8 0.5 35 730-764 2-45 (140)
106 1wew_A DNA-binding family prot 90.8 0.11 3.8E-06 45.5 2.5 41 781-822 28-71 (78)
107 3pur_A Lysine-specific demethy 90.0 0.13 4.3E-06 59.7 2.7 38 781-822 56-93 (528)
108 3kv5_D JMJC domain-containing 88.6 0.078 2.7E-06 60.8 -0.3 38 781-822 50-87 (488)
109 3ql9_A Transcriptional regulat 88.4 0.056 1.9E-06 52.3 -1.4 40 781-821 67-109 (129)
110 4bbq_A Lysine-specific demethy 88.1 0.12 4.1E-06 47.8 0.7 33 729-761 74-112 (117)
111 3lqh_A Histone-lysine N-methyl 87.6 0.17 5.9E-06 51.3 1.5 34 762-800 5-38 (183)
112 3rsn_A SET1/ASH2 histone methy 85.1 0.4 1.4E-05 48.6 2.7 50 764-822 9-58 (177)
113 3c2i_A Methyl-CPG-binding prot 81.5 2.7 9.3E-05 39.0 6.4 43 404-446 24-69 (97)
114 3kv4_A PHD finger protein 8; e 80.4 0.23 7.9E-06 56.5 -1.3 38 781-822 18-55 (447)
115 2ky8_A Methyl-CPG-binding doma 80.2 1.8 6.2E-05 37.9 4.5 52 404-464 13-67 (72)
116 2ku7_A MLL1 PHD3-CYP33 RRM chi 77.6 0.43 1.5E-05 43.7 -0.2 18 783-800 2-19 (140)
117 2d8s_A Cellular modulator of i 75.3 0.53 1.8E-05 41.5 -0.3 47 716-762 13-66 (80)
118 3rsn_A SET1/ASH2 histone methy 74.1 1.2 4.2E-05 45.1 2.0 28 720-748 7-38 (177)
119 1d9n_A Methyl-CPG-binding prot 73.7 3.1 0.00011 36.8 4.2 40 404-443 11-53 (75)
120 1vyx_A ORF K3, K3RING; zinc-bi 71.1 0.37 1.3E-05 40.3 -2.2 47 715-761 3-54 (60)
121 2ct0_A Non-SMC element 1 homol 70.5 1.7 5.7E-05 38.1 1.8 45 717-761 14-59 (74)
122 1iym_A EL5; ring-H2 finger, ub 65.1 3.5 0.00012 32.2 2.5 43 717-761 4-50 (55)
123 3vxv_A Methyl-CPG-binding doma 64.5 6.8 0.00023 34.1 4.3 59 404-467 6-67 (69)
124 3k1l_B Fancl; UBC, ring, RWD, 63.6 2.7 9.3E-05 46.9 2.1 32 716-747 306-345 (381)
125 1ub1_A MECP2, attachment regio 62.6 4.1 0.00014 39.7 2.9 57 404-465 38-97 (133)
126 1x4j_A Ring finger protein 38; 59.7 1.9 6.7E-05 36.1 0.1 44 716-761 21-67 (75)
127 2ect_A Ring finger protein 126 59.7 5.6 0.00019 33.4 2.9 45 716-762 13-60 (78)
128 4ap4_A E3 ubiquitin ligase RNF 59.0 0.28 9.4E-06 44.7 -5.7 43 717-761 6-55 (133)
129 2pv0_B DNA (cytosine-5)-methyl 57.6 0.69 2.3E-05 51.9 -3.9 39 782-821 104-146 (386)
130 2kiz_A E3 ubiquitin-protein li 56.8 2 6.8E-05 35.3 -0.3 46 715-762 11-59 (69)
131 2ecl_A Ring-box protein 2; RNF 55.7 3.4 0.00012 35.6 1.0 28 732-761 44-71 (81)
132 3a1b_A DNA (cytosine-5)-methyl 53.7 0.98 3.4E-05 45.1 -3.2 39 782-821 90-132 (159)
133 2ecm_A Ring finger and CHY zin 53.2 2.9 9.9E-05 32.6 0.1 43 717-761 4-50 (55)
134 1v87_A Deltex protein 2; ring- 52.4 2.6 8.7E-05 38.0 -0.4 32 733-764 58-92 (114)
135 1bor_A Transcription factor PM 50.6 18 0.0006 29.0 4.3 40 717-761 5-44 (56)
136 2l0b_A E3 ubiquitin-protein li 49.9 3.3 0.00011 36.4 -0.1 44 716-761 38-84 (91)
137 3nw0_A Non-structural maintena 48.9 5.2 0.00018 41.8 1.2 45 718-762 180-225 (238)
138 2yur_A Retinoblastoma-binding 48.1 4.9 0.00017 33.8 0.7 46 716-761 13-59 (74)
139 3dpl_R Ring-box protein 1; ubi 45.3 4.2 0.00014 37.5 -0.2 26 734-761 71-96 (106)
140 4a0k_B E3 ubiquitin-protein li 44.5 5.5 0.00019 37.6 0.5 25 735-761 83-107 (117)
141 2ysl_A Tripartite motif-contai 43.5 13 0.00045 30.5 2.6 45 716-761 18-64 (73)
142 2d8t_A Dactylidin, ring finger 41.7 8.6 0.00029 31.9 1.2 44 716-762 13-57 (71)
143 2ecj_A Tripartite motif-contai 39.6 14 0.00046 28.9 2.0 45 716-760 13-58 (58)
144 2ecn_A Ring finger protein 141 39.3 7.2 0.00025 32.0 0.4 44 716-762 13-56 (70)
145 2egp_A Tripartite motif-contai 38.6 17 0.00058 30.2 2.6 45 716-761 10-60 (79)
146 1chc_A Equine herpes virus-1 r 36.8 7.3 0.00025 31.7 0.0 44 717-762 4-48 (68)
147 2ep4_A Ring finger protein 24; 36.6 4.6 0.00016 33.5 -1.2 45 716-762 13-60 (74)
148 2k1p_A Zinc finger RAN-binding 36.3 19 0.00063 27.0 2.2 11 751-761 3-13 (33)
149 2lk0_A RNA-binding protein 5; 36.1 12 0.00041 27.9 1.1 10 752-761 3-12 (32)
150 2ecw_A Tripartite motif-contai 35.9 23 0.00079 29.5 3.0 45 716-761 17-66 (85)
151 3pfq_A PKC-B, PKC-beta, protei 35.3 12 0.00042 43.7 1.6 75 719-800 49-147 (674)
152 2jrp_A Putative cytoplasmic pr 33.8 13 0.00045 33.5 1.1 22 719-740 3-28 (81)
153 1weq_A PHD finger protein 7; s 33.7 23 0.00079 32.1 2.7 32 729-761 45-77 (85)
154 2ysj_A Tripartite motif-contai 33.0 15 0.00052 29.5 1.3 44 716-760 18-63 (63)
155 2ecv_A Tripartite motif-contai 32.8 14 0.00048 30.8 1.2 45 716-761 17-66 (85)
156 2ckl_B Ubiquitin ligase protei 31.8 9.1 0.00031 36.8 -0.2 44 717-761 53-97 (165)
157 3l11_A E3 ubiquitin-protein li 30.7 20 0.0007 32.2 1.9 44 717-761 14-57 (115)
158 2csy_A Zinc finger protein 183 30.1 10 0.00034 32.2 -0.2 45 715-761 12-56 (81)
159 2lq6_A Bromodomain-containing 29.9 15 0.00051 33.0 0.9 29 718-746 17-49 (87)
160 2ea6_A Ring finger protein 4; 29.7 5.1 0.00017 32.4 -2.1 44 716-761 13-63 (69)
161 2ct2_A Tripartite motif protei 29.5 9.7 0.00033 32.3 -0.4 46 716-761 13-63 (88)
162 3lrq_A E3 ubiquitin-protein li 29.5 7.9 0.00027 34.5 -1.0 44 718-762 22-66 (100)
163 2ecy_A TNF receptor-associated 29.1 12 0.0004 30.5 0.0 44 717-761 14-57 (66)
164 3ng2_A RNF4, snurf, ring finge 29.0 9.7 0.00033 31.1 -0.5 44 717-762 9-59 (71)
165 2d8v_A Zinc finger FYVE domain 28.8 32 0.0011 30.0 2.7 20 716-736 6-25 (67)
166 1t1h_A Gspef-atpub14, armadill 28.2 14 0.00048 30.9 0.4 44 716-761 6-50 (78)
167 2fiy_A Protein FDHE homolog; F 28.0 28 0.00096 37.9 2.7 28 716-743 180-221 (309)
168 1jm7_A BRCA1, breast cancer ty 26.9 19 0.00066 31.9 1.0 44 718-761 21-65 (112)
169 3ztg_A E3 ubiquitin-protein li 26.6 9.8 0.00033 32.9 -0.9 46 716-761 11-57 (92)
170 4ayc_A E3 ubiquitin-protein li 23.5 17 0.00059 34.0 0.1 28 718-746 53-81 (138)
171 2xeu_A Ring finger protein 4; 23.1 11 0.00037 30.0 -1.2 42 718-761 3-51 (64)
172 3fl2_A E3 ubiquitin-protein li 23.0 14 0.00048 33.8 -0.7 44 718-762 52-95 (124)
173 2lq6_A Bromodomain-containing 22.4 28 0.00096 31.2 1.2 38 750-800 11-50 (87)
174 2ckl_A Polycomb group ring fin 21.9 21 0.00071 31.9 0.3 30 717-746 14-44 (108)
175 1jm7_B BARD1, BRCA1-associated 21.2 63 0.0022 29.3 3.3 40 718-761 22-62 (117)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.68 E-value=2.5e-17 Score=152.55 Aligned_cols=93 Identities=35% Similarity=0.911 Sum_probs=77.9
Q ss_pred CCCCCcccccCCCCce---eeeCCCCCcCCCccCCCCC--CCCCCccCCccc-ccccCCCCCCCCCCCCCCCcceecCcc
Q 002270 715 DPNDDTCGICGDGGDL---ICCDGCPSTFHQSCLDIQM--LPPGDWHCPNCT-CKFCGLAGEDDAEGDDTTTSALLPCAM 788 (944)
Q Consensus 715 d~ndd~C~VCgdgGdL---LcCD~Cp~aFH~~CL~p~~--vP~g~W~Cp~C~-C~iCG~~~~ds~eed~~s~~~Ll~Cdq 788 (944)
+.|+++|.+|+++|++ |+|+.|+++||+.||+++. ++.+.|+|+.|. |.+|+..+.+ ..|+.|++
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C~~C~~~~~~---------~~ll~Cd~ 74 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGED---------SKMLVCDT 74 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCCTTTCCCSCC---------TTEEECSS
T ss_pred CCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcccccCccCCC---------CCeeECCC
Confidence 4588999999998876 9999999999999999865 457899999995 9999887643 24899999
Q ss_pred chhhhhccccccccccccCCCCCccceeCccch
Q 002270 789 CEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 789 CeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
|+++||..|+.| ++...|.+.|||+ .|.
T Consensus 75 C~~~yH~~Cl~p----pl~~~P~g~W~C~-~C~ 102 (111)
T 2ysm_A 75 CDKGYHTFCLQP----VMKSVPTNGWKCK-NCR 102 (111)
T ss_dssp SCCEEEGGGSSS----CCSSCCSSCCCCH-HHH
T ss_pred CCcHHhHHhcCC----ccccCCCCCcCCc-CCc
Confidence 999999999987 3444577899996 553
No 2
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.63 E-value=8.1e-17 Score=150.68 Aligned_cols=92 Identities=29% Similarity=0.744 Sum_probs=75.3
Q ss_pred CcccccCCC----------CceeeeCCCCCcCCCccCCCC-----CCCCCCccCCcc-cccccCCCCCCCCCCCCCCCcc
Q 002270 719 DTCGICGDG----------GDLICCDGCPSTFHQSCLDIQ-----MLPPGDWHCPNC-TCKFCGLAGEDDAEGDDTTTSA 782 (944)
Q Consensus 719 d~C~VCgdg----------GdLLcCD~Cp~aFH~~CL~p~-----~vP~g~W~Cp~C-~C~iCG~~~~ds~eed~~s~~~ 782 (944)
+.|.+|..+ ++||+|+.|+++||+.||+++ .++.+.|+|+.| .|.+|+....+ ..
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~---------~~ 72 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSEND---------DQ 72 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCTTT---------TT
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCcccccCCC---------Cc
Confidence 578888643 489999999999999999975 467899999999 59999876532 35
Q ss_pred eecCccchhhhhccccccccccccCCCCCccceeCccchhhH
Q 002270 783 LLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQELS 824 (944)
Q Consensus 783 Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~CkeI~ 824 (944)
|+.|+.|+++||+.|+.| ++...|.+.|||+ .|...+
T Consensus 73 ll~Cd~C~~~yH~~Cl~p----pl~~~P~g~W~C~-~C~~~~ 109 (114)
T 2kwj_A 73 LLFCDDCDRGYHMYCLNP----PVAEPPEGSWSCH-LCWELL 109 (114)
T ss_dssp EEECSSSCCEEETTTSSS----CCSSCCSSCCCCH-HHHHHH
T ss_pred eEEcCCCCccccccccCC----CccCCCCCCeECc-cccchh
Confidence 899999999999999987 3445678899996 776543
No 3
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.61 E-value=3.4e-16 Score=146.11 Aligned_cols=90 Identities=31% Similarity=0.742 Sum_probs=77.5
Q ss_pred CCCCCCCCcccccCCCCceeeeC--CCCCcCCCccCCCCCCCCCCccCCcccccccCCCCCCCCCCCCCCCcceecCccc
Q 002270 712 DGDDPNDDTCGICGDGGDLICCD--GCPSTFHQSCLDIQMLPPGDWHCPNCTCKFCGLAGEDDAEGDDTTTSALLPCAMC 789 (944)
Q Consensus 712 dged~ndd~C~VCgdgGdLLcCD--~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C~iCG~~~~ds~eed~~s~~~Ll~CdqC 789 (944)
++.+.++++|.+|+++|+||+|| .|+++||+.||++..+|.|.|+||.|.|.+|++... +.|..|
T Consensus 9 ~~~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~C~~C~k~~~-------------~~C~~C 75 (107)
T 4gne_A 9 EPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAV-------------SFCEFC 75 (107)
T ss_dssp -CCCSSCSSCTTTCCCSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGBCTTTCSBCC-------------EECSSS
T ss_pred CCcCCCCCCCCcCCCCCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCCCCcCCCCCC-------------cCcCCC
Confidence 34567889999999999999999 899999999999999999999999999999988753 789999
Q ss_pred hhhhhccccccccccccCCCCCccceeCc
Q 002270 790 EKKYHKLCMQEMDALSDNLTGLVTSFCGR 818 (944)
Q Consensus 790 eR~YHv~CL~p~~~~pl~~~p~~~WFCs~ 818 (944)
..+||..|+.... ...+...|+|+.
T Consensus 76 p~sfC~~c~~g~l----~~~~~~~~~c~~ 100 (107)
T 4gne_A 76 PHSFCKDHEKGAL----VPSALEGRLCCS 100 (107)
T ss_dssp SCEECTTTCTTSC----EECTTTTCEECT
T ss_pred CcchhhhccCCcc----eecCCCCceecC
Confidence 9999999998632 223567899853
No 4
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.57 E-value=7.6e-16 Score=143.59 Aligned_cols=92 Identities=26% Similarity=0.647 Sum_probs=74.1
Q ss_pred CCCcccccCC---------CCceeeeCCCCCcCCCccCCCC-----CCCCCCccCCcc-cccccCCCCCCCCCCCCCCCc
Q 002270 717 NDDTCGICGD---------GGDLICCDGCPSTFHQSCLDIQ-----MLPPGDWHCPNC-TCKFCGLAGEDDAEGDDTTTS 781 (944)
Q Consensus 717 ndd~C~VCgd---------gGdLLcCD~Cp~aFH~~CL~p~-----~vP~g~W~Cp~C-~C~iCG~~~~ds~eed~~s~~ 781 (944)
+.++|.+|.. +++||.|+.|+++||++||++. .++.+.|+|+.| .|.+|+..+.+ ..
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~--------~~ 75 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKN--------AD 75 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCCCT--------TC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcCCC--------cc
Confidence 4578999953 4589999999999999999852 467899999999 59999876532 13
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|+++||+.|+.| ++...|.+.|||+ .|.
T Consensus 76 ~ll~Cd~C~~~yH~~Cl~p----~l~~~P~~~W~C~-~C~ 110 (112)
T 3v43_A 76 NMLFCDSCDRGFHMECCDP----PLTRMPKGMWICQ-ICR 110 (112)
T ss_dssp CCEECTTTCCEECGGGCSS----CCSSCCSSCCCCT-TTS
T ss_pred ceEEcCCCCCeeecccCCC----CCCCCCCCCeECC-CCC
Confidence 5899999999999999986 3445678899995 554
No 5
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.56 E-value=2.5e-15 Score=155.92 Aligned_cols=155 Identities=21% Similarity=0.380 Sum_probs=114.0
Q ss_pred CCcchhhhhhccCceeccceEEEeeccCcceeeeeeeecCCcccCCCCceeeceeeeeccCCccccCceeEeecCCcchh
Q 002270 609 GKLTLLSWLIDSGTVQLSQKVQYMNRRRTKVMLEGWITRDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIYLDSGVSLL 688 (944)
Q Consensus 609 ~kRTVLswLID~G~v~~~~kV~Y~n~k~~~~lL~G~it~~GI~C~CC~kvfS~S~FE~HAG~k~rrPy~nI~LedG~SLl 688 (944)
++|+.+.| ..+..++++|+|++...+..+|+|+.+.| .......+.+.|+++|+|+ |.||.
T Consensus 66 rar~~~~~-----~~l~~g~~vm~nyn~~~~~~~G~~y~~~I-------------~~~~~~r~~~~~~a~i~l~-g~sl~ 126 (226)
T 3ask_A 66 RARTIIKW-----QDLEVGQVVMLNYNPDNPKERGFWYDAEI-------------SRKRETRTARELYANVVLG-DDSLN 126 (226)
T ss_dssp CCCCBCCG-----GGCCTTCEEEEEECTTSTTSCCEEEEEEE-------------EEEEECSSCEEEEEEEECS-SSEEE
T ss_pred cccccCCc-----cccccCcEEEEecccCCccccCceeehhh-------------hhhhhcccccceeeEEEec-CCccc
Confidence 45777777 45556688999999998899999999987 3444556778899999998 99999
Q ss_pred hhhHHhhhccccccccCCccccCCC--CCCCCCcccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCcccccccC
Q 002270 689 QCQIDAWNKLKESESIGFESVDVDG--DDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTCKFCG 766 (944)
Q Consensus 689 dCqIeawnkq~~sEk~G~~pV~~dg--ed~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C~iCG 766 (944)
+|++.+..+.+.+|..+..+...+. ...++..|..|. +...|.|..|.|.+|+
T Consensus 127 ~c~i~f~~e~~~ie~~~~~~~~~~~~~~r~~~~~C~~c~-------------------------~~~~w~C~~c~C~vC~ 181 (226)
T 3ask_A 127 DCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGPSCKHCK-------------------------DDVNRLCRVCACHLCG 181 (226)
T ss_dssp EEEESCTTCCBCCCCSSSSCCCCSCCCCCCCSCCCTTTT-------------------------TCTTSCCTTTSCSSSC
T ss_pred ceeEEEecccccccccccccccccccccccCCccccccc-------------------------CCcCEecCCCCCcCCC
Confidence 9999988887777776654432211 123444555553 4567999999999998
Q ss_pred CCCCCCCCCCCCCCcceecCccchhhhhccccccccccccCCCCCc-cceeCccch
Q 002270 767 LAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDALSDNLTGLV-TSFCGRKCQ 821 (944)
Q Consensus 767 ~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~-~WFCs~~Ck 821 (944)
..... ..|+.|+.|+++||+.|+.| |+...|.+ .|||+ .|.
T Consensus 182 ~~~~~---------~~lL~CD~C~~~yH~~CL~P----PL~~vP~G~~W~Cp-~C~ 223 (226)
T 3ask_A 182 GRQDP---------DKQLMCDECDMAFHIYCLDP----PLSSVPSEDEWYCP-ECR 223 (226)
T ss_dssp CCCC-----------CCEECSSSCCEECSCC--C----CCCSCCSSSCCCCG-GGC
T ss_pred CCCCC---------CCeEEcCCCCcceeCccCCC----CcccCCCCCCCCCc-CCc
Confidence 76532 34899999999999999986 34455777 99996 553
No 6
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.16 E-value=2e-11 Score=103.05 Aligned_cols=50 Identities=50% Similarity=1.385 Sum_probs=45.3
Q ss_pred CCCCCCCcccccCCCCceeeeCCCCCcCCCccCCC--CCCCCCCccCCcccc
Q 002270 713 GDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDI--QMLPPGDWHCPNCTC 762 (944)
Q Consensus 713 ged~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p--~~vP~g~W~Cp~C~C 762 (944)
+++.+++.|.+|+++|+||+||.|+++||+.|++| +.+|.++|+|+.|..
T Consensus 4 ~~d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 55 (61)
T 1mm2_A 4 GSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 55 (61)
T ss_dssp CSCSSCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTT
T ss_pred cccCCCCcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcC
Confidence 45678999999999999999999999999999996 468999999999974
No 7
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=99.15 E-value=1.1e-11 Score=120.87 Aligned_cols=95 Identities=24% Similarity=0.569 Sum_probs=67.4
Q ss_pred CCcccCCCCceeeceeeeeccCCccccCceeEeecCCcchhhhhHHhhhccccccccCCccccCCCCCCCCCcccccCCC
Q 002270 648 DGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIYLDSGVSLLQCQIDAWNKLKESESIGFESVDVDGDDPNDDTCGICGDG 727 (944)
Q Consensus 648 ~GI~C~CC~kvfS~S~FE~HAG~k~rrPy~nI~LedG~SLldCqIeawnkq~~sEk~G~~pV~~dged~ndd~C~VCgdg 727 (944)
++|.|.+|+..++++++ ......|+..+.+ ...|....... ++ ..++|.++++|.+|+++
T Consensus 13 ~~i~Ct~Cg~~~~~~q~----~~~~~HPll~v~~-----C~~C~~~y~~~-------~~----~~d~Dg~~d~C~vC~~G 72 (142)
T 2lbm_A 13 GIVSCTACGQQVNHFQK----DSIYRHPSLQVLI-----CKNCFKYYMSD-------DI----SRDSDGMDEQCRWCAEG 72 (142)
T ss_dssp CCCBCTTTCSBSTTTCS----SSEEEETTTTEEE-----EHHHHHHHHHS-------CC----CBCTTSCBCSCSSSCCC
T ss_pred CCCEecCCCCccccccc----cchhcCCCccccc-----cHHHHHHHhcC-------Cc----eecCCCCCCeecccCCC
Confidence 78999999999876442 1112346554433 34454322211 11 12457789999999999
Q ss_pred CceeeeCCCCCcCCCccCCCCC---------CCCCCccCCcccc
Q 002270 728 GDLICCDGCPSTFHQSCLDIQM---------LPPGDWHCPNCTC 762 (944)
Q Consensus 728 GdLLcCD~Cp~aFH~~CL~p~~---------vP~g~W~Cp~C~C 762 (944)
|+|++||.||++||..|+.|+. .|.++|+|+.|.+
T Consensus 73 G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 73 GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 9999999999999999999643 4889999999964
No 8
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=4.4e-11 Score=99.09 Aligned_cols=50 Identities=38% Similarity=1.083 Sum_probs=45.2
Q ss_pred CCCCCCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 712 DGDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 712 dged~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
++.+.+++.|.+|+++++||+||.|+++||+.|++|+ .+|.+.|+|+.|.
T Consensus 3 ~g~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 3 SGSSGHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CCCCSSCCSCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCcCCCCCCCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 4567789999999999999999999999999999964 5899999999985
No 9
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.09 E-value=6.1e-11 Score=107.49 Aligned_cols=48 Identities=31% Similarity=0.808 Sum_probs=44.2
Q ss_pred CCCCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 714 DDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 714 ed~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
.+.+++.|.+|+++|+||+||.|+++||++|+.|+ .+|.++|+|+.|.
T Consensus 21 ~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~ 70 (88)
T 1fp0_A 21 LDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCH 70 (88)
T ss_dssp SSSSSSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCC
T ss_pred cCCCCCcCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCcccc
Confidence 46788999999999999999999999999999764 6899999999997
No 10
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.08 E-value=4.7e-11 Score=102.05 Aligned_cols=48 Identities=50% Similarity=1.358 Sum_probs=43.6
Q ss_pred CCCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCcccc
Q 002270 715 DPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCTC 762 (944)
Q Consensus 715 d~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~C 762 (944)
+.+++.|.+|+++|+||+||.|+++||+.|++|+ .+|.+.|+|+.|.-
T Consensus 5 ~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 5 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp CSCCCSBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 4578999999999999999999999999999964 68999999999963
No 11
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.06 E-value=6e-11 Score=120.69 Aligned_cols=49 Identities=49% Similarity=1.289 Sum_probs=44.5
Q ss_pred CCCCCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 713 GDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 713 ged~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
+++.+++.|.+|+++|+||+||.|+++||+.|+.|+ .+|.++|+|+.|.
T Consensus 2 ~~d~~~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~ 52 (207)
T 3u5n_A 2 DDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCR 52 (207)
T ss_dssp -CCSSCSSBTTTCCCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTS
T ss_pred CCCCCCCCCCCCCCCCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCcee
Confidence 356789999999999999999999999999999875 5899999999997
No 12
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.05 E-value=7.2e-11 Score=101.57 Aligned_cols=46 Identities=33% Similarity=0.850 Sum_probs=41.9
Q ss_pred CCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 716 PNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
.+...|.+|+++++||+||.|+++||++||.|+ .+|.++|+|+.|.
T Consensus 10 ~~~~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~ 57 (66)
T 2lri_C 10 APGARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCS 57 (66)
T ss_dssp CTTCCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTT
T ss_pred CCCCCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECcccc
Confidence 456789999999999999999999999999875 5899999999996
No 13
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.05 E-value=5.7e-11 Score=100.28 Aligned_cols=48 Identities=42% Similarity=1.198 Sum_probs=43.7
Q ss_pred CCCCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 714 DDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 714 ed~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
++.+++.|.+|+++++||+||.|+++||+.|++|+ .+|.+.|+|+.|.
T Consensus 7 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~ 56 (61)
T 2l5u_A 7 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 56 (61)
T ss_dssp SSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGG
T ss_pred cCCCCCCCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECcccc
Confidence 35578899999999999999999999999999984 5899999999996
No 14
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.04 E-value=9.2e-11 Score=117.05 Aligned_cols=46 Identities=46% Similarity=1.275 Sum_probs=42.8
Q ss_pred CCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 716 PNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
+|++.|.+|+++|+||+||.|+++||..|+.|+ .+|.++|+|+.|.
T Consensus 2 ~~~~~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~ 49 (184)
T 3o36_A 2 PNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCR 49 (184)
T ss_dssp CSCSSCTTTCCCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTS
T ss_pred CCCCccccCCCCCeeeecCCCCcccCccccCCCCCCCCCCCEECcccc
Confidence 588999999999999999999999999999875 5899999999997
No 15
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.03 E-value=8.1e-11 Score=98.68 Aligned_cols=48 Identities=38% Similarity=1.022 Sum_probs=43.4
Q ss_pred CCCCCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCcccc
Q 002270 715 DPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCTC 762 (944)
Q Consensus 715 d~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~C 762 (944)
|.+++.|.+|+++|+||+||.|+++||+.|++|+ .+|.+.|+|+.|..
T Consensus 2 d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 2 MIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CCCCSSCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCCCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 4578999999999999999999999999999964 58999999999964
No 16
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.02 E-value=1.1e-10 Score=105.40 Aligned_cols=48 Identities=35% Similarity=0.913 Sum_probs=44.3
Q ss_pred CCCCCcccccCCCC-----ceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 715 DPNDDTCGICGDGG-----DLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 715 d~ndd~C~VCgdgG-----dLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
..+++.|.+|++++ +||+||.|+.+||+.|++|+.+|.+.|||+.|..
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~ 74 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 74 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccC
Confidence 45778999999887 8999999999999999999999999999999975
No 17
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.00 E-value=7.3e-11 Score=102.84 Aligned_cols=48 Identities=35% Similarity=0.913 Sum_probs=43.7
Q ss_pred CCCCCcccccCCCC-----ceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 715 DPNDDTCGICGDGG-----DLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 715 d~ndd~C~VCgdgG-----dLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
..+++.|.+|++++ +||+||.|+.+||++|++|+.+|+++|||+.|..
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 45788999998775 8999999999999999999999999999999964
No 18
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.94 E-value=3.4e-10 Score=95.98 Aligned_cols=49 Identities=24% Similarity=0.807 Sum_probs=42.7
Q ss_pred CCCCCCcccccCCC-----CceeeeCCCCCcCCCccCCCCC----C-CCCCccCCcccc
Q 002270 714 DDPNDDTCGICGDG-----GDLICCDGCPSTFHQSCLDIQM----L-PPGDWHCPNCTC 762 (944)
Q Consensus 714 ed~ndd~C~VCgdg-----GdLLcCD~Cp~aFH~~CL~p~~----v-P~g~W~Cp~C~C 762 (944)
++.++..|.+|+.+ ++||+||.|+.+||+.|++|+. + |.+.|+|+.|..
T Consensus 2 ~~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 2 SSGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CCCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcC
Confidence 35578899999976 7899999999999999999864 3 889999999963
No 19
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=8.5e-10 Score=100.23 Aligned_cols=57 Identities=33% Similarity=0.845 Sum_probs=48.3
Q ss_pred CCCCCCcccccCCCCc---eeeeCCCCCcCCCccCCCC--CCCCCCccCCcccccccCCCCC
Q 002270 714 DDPNDDTCGICGDGGD---LICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCTCKFCGLAGE 770 (944)
Q Consensus 714 ed~ndd~C~VCgdgGd---LLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~C~iCG~~~~ 770 (944)
...++..|.+|+.+++ ||+||.|+++||+.||+|+ .+|.++|+|+.|....|+....
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~~~~~~~ 73 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPE 73 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHHHSCCSS
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCccccCCcc
Confidence 4456789999998764 9999999999999999964 5899999999999777766543
No 20
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.82 E-value=1.7e-09 Score=109.27 Aligned_cols=46 Identities=30% Similarity=0.821 Sum_probs=41.9
Q ss_pred CCcccccCCCCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccccc
Q 002270 718 DDTCGICGDGGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCTCK 763 (944)
Q Consensus 718 dd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~C~ 763 (944)
++.|.+|+++|+||+||.|+++||+.|+.|+ .+|.|+|+|+.|...
T Consensus 2 ~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 5799999999999999999999999999764 589999999999853
No 21
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.82 E-value=1.2e-09 Score=98.42 Aligned_cols=47 Identities=30% Similarity=0.707 Sum_probs=41.3
Q ss_pred CCCcccccCCC-----CceeeeCCCCCcCCCccCCCCC------CCCCCccCCccccc
Q 002270 717 NDDTCGICGDG-----GDLICCDGCPSTFHQSCLDIQM------LPPGDWHCPNCTCK 763 (944)
Q Consensus 717 ndd~C~VCgdg-----GdLLcCD~Cp~aFH~~CL~p~~------vP~g~W~Cp~C~C~ 763 (944)
++..|.+|+.+ ++||+||.|+++||++|++|+. +|.+.|+|+.|...
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 56799999876 6899999999999999999863 79999999999743
No 22
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.74 E-value=2.7e-09 Score=86.41 Aligned_cols=42 Identities=43% Similarity=1.147 Sum_probs=36.9
Q ss_pred cccccCCCC---ceeeeCCCCCcCCCccCCC--CCCCCCCccCCccc
Q 002270 720 TCGICGDGG---DLICCDGCPSTFHQSCLDI--QMLPPGDWHCPNCT 761 (944)
Q Consensus 720 ~C~VCgdgG---dLLcCD~Cp~aFH~~CL~p--~~vP~g~W~Cp~C~ 761 (944)
.|.+|+.++ +||+||.|+++||+.|+.| ..+|.++|+|+.|.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~ 48 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ 48 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTS
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcc
Confidence 589998654 6999999999999999976 46899999999995
No 23
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=1.1e-08 Score=90.53 Aligned_cols=45 Identities=31% Similarity=0.927 Sum_probs=39.5
Q ss_pred CCCcccccC---CCCceeeeCCCCCcCCCccCCCC--CCCCC-CccCCccc
Q 002270 717 NDDTCGICG---DGGDLICCDGCPSTFHQSCLDIQ--MLPPG-DWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCg---dgGdLLcCD~Cp~aFH~~CL~p~--~vP~g-~W~Cp~C~ 761 (944)
++..|.+|+ ++++||+||.|+++||++||+|+ .+|.+ +|+|+.|.
T Consensus 25 ~~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 25 HSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp SSSSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTC
T ss_pred CCCCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCcc
Confidence 345899998 57889999999999999999964 58999 99999995
No 24
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.67 E-value=4.5e-09 Score=98.02 Aligned_cols=42 Identities=38% Similarity=1.012 Sum_probs=37.3
Q ss_pred cccccCCC----CceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 720 TCGICGDG----GDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 720 ~C~VCgdg----GdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
.|.+|++. ++||+||.|+++||++||.|+ .+|.++|+|+.|.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~ 110 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR 110 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTS
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCC
Confidence 78999865 479999999999999999864 6899999999996
No 25
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.63 E-value=5.7e-09 Score=97.69 Aligned_cols=42 Identities=36% Similarity=0.989 Sum_probs=37.5
Q ss_pred cccccCC---CCceeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 720 TCGICGD---GGDLICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 720 ~C~VCgd---gGdLLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
.|.+|+. +++||+||.|+++||++||+|+ .+|.++|+|+.|.
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~ 106 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCW 106 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECcccc
Confidence 6888986 5789999999999999999964 6899999999885
No 26
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.60 E-value=2.2e-08 Score=92.65 Aligned_cols=42 Identities=33% Similarity=1.024 Sum_probs=37.4
Q ss_pred cccccCCCCc---eeeeCCCCCcCCCccCCCC--CCCCCCccCCccc
Q 002270 720 TCGICGDGGD---LICCDGCPSTFHQSCLDIQ--MLPPGDWHCPNCT 761 (944)
Q Consensus 720 ~C~VCgdgGd---LLcCD~Cp~aFH~~CL~p~--~vP~g~W~Cp~C~ 761 (944)
.|.+|+..++ ||.||.|+++||++|+.|+ .+|.+.|+|+.|.
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~ 102 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCR 102 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHH
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCc
Confidence 7899987765 9999999999999999965 5899999999885
No 27
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.59 E-value=9.3e-09 Score=99.03 Aligned_cols=50 Identities=34% Similarity=0.891 Sum_probs=44.2
Q ss_pred CCCCCCCcccccCCCCceeeeCCCCCcCCCccCCCC-------CC--CCCCccCCcccc
Q 002270 713 GDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQ-------ML--PPGDWHCPNCTC 762 (944)
Q Consensus 713 ged~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~-------~v--P~g~W~Cp~C~C 762 (944)
++|.++++|.+|+++|+|++||.||++||..|+.+. .+ |.++|+|+.|.+
T Consensus 52 d~Dg~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 52 DSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CTTSCBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 457789999999999999999999999999999863 23 889999999974
No 28
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.58 E-value=1.9e-08 Score=87.28 Aligned_cols=42 Identities=40% Similarity=1.119 Sum_probs=37.4
Q ss_pred cccccC---CCCceeeeCCCCCcCCCccCCCC--CCCCC-CccCCccc
Q 002270 720 TCGICG---DGGDLICCDGCPSTFHQSCLDIQ--MLPPG-DWHCPNCT 761 (944)
Q Consensus 720 ~C~VCg---dgGdLLcCD~Cp~aFH~~CL~p~--~vP~g-~W~Cp~C~ 761 (944)
.|.+|+ ++++||+||.|+++||++||+|+ .+|.+ +|+|+.|.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 67 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCcc
Confidence 678888 56789999999999999999964 58999 99999996
No 29
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.58 E-value=2.5e-08 Score=88.32 Aligned_cols=56 Identities=21% Similarity=0.621 Sum_probs=44.8
Q ss_pred CCCccCCcccccccCCCCCCCCCCCCCCCcceecCccchhhhhccccccccccccCCCCCcc-ceeCccch
Q 002270 752 PGDWHCPNCTCKFCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDALSDNLTGLVT-SFCGRKCQ 821 (944)
Q Consensus 752 ~g~W~Cp~C~C~iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~-WFCs~~Ck 821 (944)
+..|+|+.|.|.+|+..... ..|+.|+.|+++||+.|+.| ++...|.+. |||+ .|.
T Consensus 19 ~~~W~C~~C~C~vC~~~~d~---------~~ll~CD~C~~~yH~~Cl~P----pL~~~P~g~~W~C~-~C~ 75 (77)
T 3shb_A 19 DVNRLCRVCACHLCGGRQDP---------DKQLMCDECDMAFHIYCLDP----PLSSVPSEDEWYCP-ECR 75 (77)
T ss_dssp CTTSCCTTTSBTTTCCCSCG---------GGEEECTTTCCEEETTTSSS----CCSSCCSSSCCCCT-TTC
T ss_pred CCCCCCCCCcCCccCCCCCC---------cceeEeCCCCCccCcccCCC----cccCCCCCCceECc-Ccc
Confidence 36799999999999877532 35899999999999999987 344556777 9995 554
No 30
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.54 E-value=5.9e-08 Score=84.52 Aligned_cols=44 Identities=36% Similarity=1.091 Sum_probs=39.2
Q ss_pred CCCcccccCC--CCceeeeCC--CC-CcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGD--GGDLICCDG--CP-STFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd--gGdLLcCD~--Cp-~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+..+| +|+. .|+||.||. |+ .+||..|+++...|.+.|||+.|.
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~ 63 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCS 63 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTS
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCC
Confidence 45678 7987 689999999 88 699999999999999999999996
No 31
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.50 E-value=4.2e-08 Score=102.12 Aligned_cols=44 Identities=36% Similarity=0.988 Sum_probs=35.8
Q ss_pred CCcccccCC---CCceeeeCCCCCcCCCccCCCC--CCCCC-CccCCccc
Q 002270 718 DDTCGICGD---GGDLICCDGCPSTFHQSCLDIQ--MLPPG-DWHCPNCT 761 (944)
Q Consensus 718 dd~C~VCgd---gGdLLcCD~Cp~aFH~~CL~p~--~vP~g-~W~Cp~C~ 761 (944)
+..|.+|+. +++||+||.|+++||+.||+|+ .+|.+ +|+|+.|.
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 223 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCc
Confidence 458999986 6789999999999999999975 58999 99999996
No 32
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.50 E-value=5.2e-08 Score=84.54 Aligned_cols=57 Identities=21% Similarity=0.610 Sum_probs=45.1
Q ss_pred CCCCccCCcccccccCCCCCCCCCCCCCCCcceecCccchhhhhccccccccccccCCCCCc-cceeCccch
Q 002270 751 PPGDWHCPNCTCKFCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDALSDNLTGLV-TSFCGRKCQ 821 (944)
Q Consensus 751 P~g~W~Cp~C~C~iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~-~WFCs~~Ck 821 (944)
....|+|+.|.|.+|+.... .+.|+.|+.|+++||+.||.| ++...|.+ .|||+ .|.
T Consensus 10 ~~~~w~C~~C~C~~C~~~~~---------~~~ll~CD~C~~~yH~~Cl~P----pl~~~P~g~~W~C~-~C~ 67 (70)
T 3asl_A 10 DDVNRLCRVCACHLCGGRQD---------PDKQLMCDECDMAFHIYCLDP----PLSSVPSEDEWYCP-ECR 67 (70)
T ss_dssp TCTTSCCTTTSBTTTCCCSC---------GGGEEECTTTCCEEEGGGSSS----CCSSCCSSSCCCCT-TTS
T ss_pred CCCCeECCCCCCcCCCCcCC---------CCCEEEcCCCCCceecccCCC----CcCCCCCCCCcCCc-Ccc
Confidence 44679999999999987653 245899999999999999986 34445677 99995 553
No 33
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=8.3e-08 Score=84.86 Aligned_cols=54 Identities=26% Similarity=0.674 Sum_probs=43.5
Q ss_pred CCccCCcccccccCCCCCCCCCCCCCCCcceecCccchhhhhccccccccccccCCCCCc-cceeCccc
Q 002270 753 GDWHCPNCTCKFCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDALSDNLTGLV-TSFCGRKC 820 (944)
Q Consensus 753 g~W~Cp~C~C~iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~-~WFCs~~C 820 (944)
..|+|+.|.|.+|+..... ..|+.|+.|+++||+.||.| |+...|.+ .|||+ .|
T Consensus 20 ~~w~C~~c~C~vC~~~~~~---------~~ll~CD~C~~~yH~~Cl~P----pl~~~P~g~~W~C~-~C 74 (77)
T 2e6s_A 20 PEKKCHSCSCRVCGGKHEP---------NMQLLCDECNVAYHIYCLNP----PLDKVPEEEYWYCP-SC 74 (77)
T ss_dssp SSSCCSSSSCSSSCCCCCS---------TTEEECSSSCCEEETTSSSS----CCSSCCCSSCCCCT-TT
T ss_pred CCeECCCCCCcCcCCcCCC---------CCEEEcCCCCccccccccCC----CccCCCCCCCcCCc-Cc
Confidence 4699999999999876432 35899999999999999986 34445677 99995 55
No 34
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.46 E-value=1.3e-07 Score=86.30 Aligned_cols=44 Identities=36% Similarity=1.091 Sum_probs=38.9
Q ss_pred CCCcccccCC--CCceeeeCC--CC-CcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGD--GGDLICCDG--CP-STFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd--gGdLLcCD~--Cp-~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
...+| +|+. .|+||+||. |+ .+||..|++++..|.+.|||+.|.
T Consensus 35 e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~ 83 (91)
T 1weu_A 35 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCS 83 (91)
T ss_dssp CCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTC
T ss_pred CCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCcc
Confidence 44567 9987 689999999 88 799999999999999999999996
No 35
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.44 E-value=8.2e-08 Score=84.96 Aligned_cols=42 Identities=40% Similarity=1.104 Sum_probs=36.3
Q ss_pred cccccCCC---CceeeeCCCCCcCCCccCCCC--CCCCCC-ccCCccc
Q 002270 720 TCGICGDG---GDLICCDGCPSTFHQSCLDIQ--MLPPGD-WHCPNCT 761 (944)
Q Consensus 720 ~C~VCgdg---GdLLcCD~Cp~aFH~~CL~p~--~vP~g~-W~Cp~C~ 761 (944)
.|.+|+.. ++||+||.|+++||++||+|+ .+|.++ |+|+.|.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 75 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCcc
Confidence 57777754 569999999999999999975 589998 9999995
No 36
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.42 E-value=5.2e-08 Score=82.12 Aligned_cols=44 Identities=36% Similarity=1.091 Sum_probs=38.4
Q ss_pred CCCcccccCC--CCceeeeCC--CC-CcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGD--GGDLICCDG--CP-STFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd--gGdLLcCD~--Cp-~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
....| +|+. .|+||.||. |+ .+||+.|++++.+|.+.|+|+.|.
T Consensus 9 e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~ 57 (60)
T 2vnf_A 9 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCS 57 (60)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHH
T ss_pred CCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCcc
Confidence 34567 8986 688999999 77 799999999999999999999885
No 37
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.42 E-value=9.2e-08 Score=87.07 Aligned_cols=45 Identities=29% Similarity=0.890 Sum_probs=38.4
Q ss_pred CCCCcccccCC--CCceeeeCCCC---CcCCCccCCCCCCCCCCccCCc-cc
Q 002270 716 PNDDTCGICGD--GGDLICCDGCP---STFHQSCLDIQMLPPGDWHCPN-CT 761 (944)
Q Consensus 716 ~ndd~C~VCgd--gGdLLcCD~Cp---~aFH~~CL~p~~vP~g~W~Cp~-C~ 761 (944)
....+| +|+. .|+||.||.|. .+||+.|++++..|.+.|||+. |.
T Consensus 24 ~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 24 QEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCK 74 (90)
T ss_dssp CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHH
T ss_pred CCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhc
Confidence 345678 8984 67899999955 8999999999999999999999 75
No 38
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.42 E-value=5.4e-08 Score=81.93 Aligned_cols=44 Identities=41% Similarity=1.171 Sum_probs=38.7
Q ss_pred CCCcccccCC--CCceeeeCC--CC-CcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGD--GGDLICCDG--CP-STFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd--gGdLLcCD~--Cp-~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+...| +|++ .|+||.||. |+ .+||..|++++..|.+.|+||.|.
T Consensus 8 e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~ 56 (59)
T 3c6w_A 8 EPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCV 56 (59)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHH
T ss_pred CCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCcc
Confidence 34567 8986 789999999 88 699999999999999999999985
No 39
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.42 E-value=6.1e-08 Score=84.16 Aligned_cols=48 Identities=27% Similarity=0.657 Sum_probs=39.6
Q ss_pred CCCCCCcccccCCC---CceeeeCCCCCcCCCccCCCCC--CCCCCccCCccc
Q 002270 714 DDPNDDTCGICGDG---GDLICCDGCPSTFHQSCLDIQM--LPPGDWHCPNCT 761 (944)
Q Consensus 714 ed~ndd~C~VCgdg---GdLLcCD~Cp~aFH~~CL~p~~--vP~g~W~Cp~C~ 761 (944)
+..+...|.+|+.. +.||+||.|+.+||..|++++. .|.+.|+|+.|.
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~ 66 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCA 66 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTH
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhcc
Confidence 34456789999864 4699999999999999999865 455899999996
No 40
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.41 E-value=6.1e-08 Score=82.42 Aligned_cols=44 Identities=41% Similarity=1.151 Sum_probs=38.6
Q ss_pred CCCcccccCC--CCceeeeCC--CC-CcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGD--GGDLICCDG--CP-STFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd--gGdLLcCD~--Cp-~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+...| +|++ .|+||.||. |+ .+||..|+++...|.+.|+||.|.
T Consensus 10 e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~ 58 (62)
T 2g6q_A 10 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCR 58 (62)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHH
T ss_pred CCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcc
Confidence 34567 8987 789999999 77 899999999999999999999985
No 41
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.14 E-value=1.4e-06 Score=79.94 Aligned_cols=41 Identities=37% Similarity=0.984 Sum_probs=33.7
Q ss_pred cccccCCCCceeeeCCCCCcCCCccCCCCC--CCCCCccCCccc
Q 002270 720 TCGICGDGGDLICCDGCPSTFHQSCLDIQM--LPPGDWHCPNCT 761 (944)
Q Consensus 720 ~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~--vP~g~W~Cp~C~ 761 (944)
+|..|.+++.||+||.|+.+||..|++|+. +| ..|+|+.|.
T Consensus 32 iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p-~~w~C~~C~ 74 (98)
T 2lv9_A 32 ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIP-DTYLCERCQ 74 (98)
T ss_dssp TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCC-SSBCCTTTS
T ss_pred ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCC-CCEECCCCc
Confidence 455555678899999999999999999863 45 479999995
No 42
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.90 E-value=3.3e-06 Score=73.40 Aligned_cols=45 Identities=36% Similarity=0.980 Sum_probs=37.3
Q ss_pred CCCcccccCC--CCceeeeCCCC---CcCCCccCCCCCCCCCCccCCcccc
Q 002270 717 NDDTCGICGD--GGDLICCDGCP---STFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 717 ndd~C~VCgd--gGdLLcCD~Cp---~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
...+| +|.. .|+||.||.|. .+||..|+++...|.+.|+|+.|.-
T Consensus 5 ~~~yC-~C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~ 54 (70)
T 1x4i_A 5 SSGYC-ICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTA 54 (70)
T ss_dssp CCCCS-TTSCCCCSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCeEE-EcCCCCCCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCc
Confidence 34566 4874 56899999964 7999999999988999999999974
No 43
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=3.7e-06 Score=76.40 Aligned_cols=56 Identities=23% Similarity=0.450 Sum_probs=43.0
Q ss_pred CCCccCCccc-ccccCCCCCCCCCCCCCCCcceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 752 PGDWHCPNCT-CKFCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 752 ~g~W~Cp~C~-C~iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
...|.|..+. |.+|+..+. ...|+.|+.|+++||+.|+.| ++..+|.+.|||+ .|.
T Consensus 8 ~s~~~~~~~~~C~vC~~~~~---------~~~ll~CD~C~~~~H~~Cl~P----pl~~~P~g~W~C~-~C~ 64 (92)
T 2e6r_A 8 HSSAQFIDSYICQVCSRGDE---------DDKLLFCDGCDDNYHIFCLLP----PLPEIPRGIWRCP-KCI 64 (92)
T ss_dssp CCCCCCCCCCCCSSSCCSGG---------GGGCEECTTTCCEECSSSSSS----CCSSCCSSCCCCH-HHH
T ss_pred CchhhccCCCCCccCCCcCC---------CCCEEEcCCCCchhccccCCC----CcccCCCCCcCCc-cCc
Confidence 4568888875 888877653 235899999999999999986 3445677899995 664
No 44
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.76 E-value=6.3e-06 Score=66.64 Aligned_cols=46 Identities=33% Similarity=0.686 Sum_probs=33.9
Q ss_pred ccccCCCCCCCCCCCCCCCcceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 762 CKFCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 762 C~iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
|.+|+..+.. ..|+.|+.|+++||..|+.| ++...|.+.|||+ .|.
T Consensus 3 C~vC~~~~~~---------~~ll~Cd~C~~~~H~~Cl~p----~l~~~P~g~W~C~-~C~ 48 (51)
T 1f62_A 3 CKVCRKKGED---------DKLILCDECNKAFHLFCLRP----ALYEVPDGEWQCP-ACQ 48 (51)
T ss_dssp CTTTCCSSCC---------SCCEECTTTCCEECHHHHCT----TCCSCCSSCCSCT-TTS
T ss_pred CCCCCCCCCC---------CCEEECCCCChhhCcccCCC----CcCCCCCCcEECc-Ccc
Confidence 5567665432 35899999999999999986 3344577899995 664
No 45
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.72 E-value=1.4e-05 Score=67.25 Aligned_cols=46 Identities=35% Similarity=0.911 Sum_probs=37.6
Q ss_pred CCCCcccccCC----CCceeeeCCCCCcCCCccCCCCCCC---CCCccCCccc
Q 002270 716 PNDDTCGICGD----GGDLICCDGCPSTFHQSCLDIQMLP---PGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgd----gGdLLcCD~Cp~aFH~~CL~p~~vP---~g~W~Cp~C~ 761 (944)
.+...|.+|+. ++.||.||.|...||..|++++..+ ...|+|+.|.
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~ 56 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCS 56 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHH
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCc
Confidence 45678999974 4569999999999999999986432 3689999986
No 46
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=97.61 E-value=1.6e-05 Score=68.41 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=28.2
Q ss_pred eecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 783 LLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 783 Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
|+.|+.|+++||+.|+.+ ++...|.+.|||+ .|.
T Consensus 24 ll~Cd~C~~~~H~~Cl~P----~l~~~P~g~W~C~-~C~ 57 (66)
T 2lri_C 24 VLRCTHCAAAFHWRCHFP----AGTSRPGTGLRCR-SCS 57 (66)
T ss_dssp CEECSSSCCEECHHHHCT----TTCCCCSSSCCCT-TTT
T ss_pred EEECCCCCCceecccCCC----ccCcCCCCCEECc-ccc
Confidence 799999999999999986 3445678899994 674
No 47
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.56 E-value=5.6e-06 Score=81.61 Aligned_cols=46 Identities=28% Similarity=0.669 Sum_probs=36.7
Q ss_pred CCCCcccccCCC----CceeeeCCCCCcCCCccCCCCC---CCCCCccCCcccc
Q 002270 716 PNDDTCGICGDG----GDLICCDGCPSTFHQSCLDIQM---LPPGDWHCPNCTC 762 (944)
Q Consensus 716 ~ndd~C~VCgdg----GdLLcCD~Cp~aFH~~CL~p~~---vP~g~W~Cp~C~C 762 (944)
.+...| +|+.+ +.|++||.|+.+||..|+++.. .+.+.|+|+.|.-
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 356789 99853 5699999999999999999753 2367899999973
No 48
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=97.49 E-value=2.7e-05 Score=77.18 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=68.8
Q ss_pred CCCcchhhhhhccCceeccceEEEeeccCcceeeeeeeecCCcccCCCCceeeceeeeeccCCccccCceeEeecCCcch
Q 002270 608 AGKLTLLSWLIDSGTVQLSQKVQYMNRRRTKVMLEGWITRDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIYLDSGVSL 687 (944)
Q Consensus 608 ~~kRTVLswLID~G~v~~~~kV~Y~n~k~~~~lL~G~it~~GI~C~CC~kvfS~S~FE~HAG~k~rrPy~nI~LedG~SL 687 (944)
+++||+|.| ..+..++++|+||+.+++..+|+|+++.| .+.+...+.+.-+.+|+|++ .+|
T Consensus 82 pRARt~l~w-----~~L~vGqvVMvNYN~d~PkerGfWYDaeI-------------~~~~~~rT~rEl~~~i~LG~-d~l 142 (161)
T 3db3_A 82 ARARTIIKW-----QDLEVGQVVMLNYNPDNPKERGFWYDAEI-------------SRKRETRTARELYANVVLGD-DSL 142 (161)
T ss_dssp CCCCCBCCG-----GGCCTTCEEEEEECSSSTTSCCEEEEEEE-------------EEEEECSSCEEEEEEEECSS-SEE
T ss_pred cceEEeccH-----HHCCcCcEEEEecCCCCccccceeEEEEE-------------eeehhhhhhheeEEEEEECC-Ccc
Confidence 578999999 88899999999999999999999999987 44555667777899999987 999
Q ss_pred hhhhHHhhhccccccccC
Q 002270 688 LQCQIDAWNKLKESESIG 705 (944)
Q Consensus 688 ldCqIeawnkq~~sEk~G 705 (944)
.+|.|.+..+.+++|++|
T Consensus 143 ndcri~fvdEIykIE~pg 160 (161)
T 3db3_A 143 NDCRIIFVDEVFKIERPG 160 (161)
T ss_dssp EEEEESCTTCCBCCCCC-
T ss_pred cceEEEEeeeEEEEecCC
Confidence 999999998889988765
No 49
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.49 E-value=9.2e-06 Score=75.44 Aligned_cols=88 Identities=17% Similarity=0.282 Sum_probs=52.3
Q ss_pred cccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCcccccccC--------------CCCCCCCCCCCCCCcceec
Q 002270 720 TCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTCKFCG--------------LAGEDDAEGDDTTTSALLP 785 (944)
Q Consensus 720 ~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C~iCG--------------~~~~ds~eed~~s~~~Ll~ 785 (944)
+|.+|+.. -|+.|...||+.|++++ .|.|..|....|. ...... .+......|+.
T Consensus 9 ~C~~C~~~----~C~~C~~c~~~~~~~~~-----~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~--~~~~~~~~m~~ 77 (117)
T 4bbq_A 9 KCKACVQG----ECGVCHYCRDMKKFGGP-----GRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNE--ETQDFEKKLME 77 (117)
T ss_dssp CSHHHHSC----CCSCSHHHHHSGGGTSC-----CCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHH--HHCCGGGSCEE
T ss_pred cCcCcCCc----CCCCCCCCcCCcccCCC-----CccccchhheeeccccccccccccccCcccccc--cccccCcceEE
Confidence 56666654 39999999999999764 2555555422221 111000 00111235889
Q ss_pred CccchhhhhccccccccccccCCCCCccceeCc
Q 002270 786 CAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGR 818 (944)
Q Consensus 786 CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~ 818 (944)
|+.|+.+||..|+...............|+|+.
T Consensus 78 C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~ 110 (117)
T 4bbq_A 78 CCICNEIVHPGCLQMDGEGLLNEELPNCWECPK 110 (117)
T ss_dssp ETTTCCEECGGGCCSCCCCEECSSSSSEEECTT
T ss_pred eeecCCeEECCCCCCCccccccccCCCCeECCC
Confidence 999999999999986432222222335699964
No 50
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.47 E-value=2.2e-05 Score=72.86 Aligned_cols=43 Identities=30% Similarity=0.811 Sum_probs=36.4
Q ss_pred CcccccCCC----CceeeeC-CCCCcCCCccCCCCC--------CCCCCccCCccc
Q 002270 719 DTCGICGDG----GDLICCD-GCPSTFHQSCLDIQM--------LPPGDWHCPNCT 761 (944)
Q Consensus 719 d~C~VCgdg----GdLLcCD-~Cp~aFH~~CL~p~~--------vP~g~W~Cp~C~ 761 (944)
..|.+|... ++++.|| .|..+||..|++++. .|...|+|+.|.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~ 59 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCL 59 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECcccc
Confidence 479999754 6799998 999999999999863 467889999997
No 51
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.44 E-value=3.1e-05 Score=64.77 Aligned_cols=36 Identities=28% Similarity=0.611 Sum_probs=28.8
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
.|+.|+.|.++||..|+.| ++...|.+.|||+ .|..
T Consensus 16 ~ll~Cd~C~~~fH~~Cl~p----pl~~~p~g~W~C~-~C~~ 51 (60)
T 2puy_A 16 QLLMCDTCSRVYHLDCLDP----PLKTIPKGMWICP-RCQD 51 (60)
T ss_dssp SCEECSSSSCEECGGGSSS----CCSSCCCSCCCCH-HHHH
T ss_pred cEEEcCCCCcCEECCcCCC----CcCCCCCCceECh-hccC
Confidence 4899999999999999986 3344577899995 5654
No 52
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.43 E-value=0.00011 Score=66.80 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=28.6
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|+++||+.|+.| ++...|.+.|||+ .|.
T Consensus 36 ~LL~CD~C~~~fH~~Cl~P----pL~~~P~g~W~C~-~C~ 70 (88)
T 1fp0_A 36 DLVMCNQCEFCFHLDCHLP----ALQDVPGEEWSCS-LCH 70 (88)
T ss_dssp CCEECTTSSCEECTTSSST----TCCCCCSSSCCCC-SCC
T ss_pred CEEECCCCCCceecccCCC----CCCCCcCCCcCCc-ccc
Confidence 3799999999999999986 3445678999995 664
No 53
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=97.41 E-value=5.1e-05 Score=64.00 Aligned_cols=35 Identities=26% Similarity=0.552 Sum_probs=28.3
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|.++||+.|+.+ ++...+.+.|||+ .|.
T Consensus 20 ~ll~Cd~C~~~fH~~Cl~p----pl~~~p~g~W~C~-~C~ 54 (61)
T 1mm2_A 20 ELLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCP-RCT 54 (61)
T ss_dssp SCBCCSSSCCCBCSSSSSS----CCSSCCSSCCCCT-TTT
T ss_pred CEEEcCCCCHHHcccccCC----CcCcCCCCccCCh-hhc
Confidence 4899999999999999986 3344577899995 564
No 54
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.40 E-value=2.5e-05 Score=68.08 Aligned_cols=47 Identities=45% Similarity=0.958 Sum_probs=37.4
Q ss_pred CCCCCCcccccCCC---CceeeeCCCCCcCCCccCCCCCC-------CCCCccCCccc
Q 002270 714 DDPNDDTCGICGDG---GDLICCDGCPSTFHQSCLDIQML-------PPGDWHCPNCT 761 (944)
Q Consensus 714 ed~ndd~C~VCgdg---GdLLcCD~Cp~aFH~~CL~p~~v-------P~g~W~Cp~C~ 761 (944)
.+++...| +|+.. +.||.||.|..+||..|+++... +...|+|+.|.
T Consensus 12 ~d~~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~ 68 (76)
T 1wem_A 12 YDPNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68 (76)
T ss_dssp CCTTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHH
T ss_pred cCCCCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCc
Confidence 34556678 79853 57999999999999999998643 34789999886
No 55
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.39 E-value=3.7e-05 Score=63.60 Aligned_cols=34 Identities=26% Similarity=0.594 Sum_probs=27.6
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccc
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKC 820 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~C 820 (944)
.|+.|+.|.++||+.|+.| ++...|.+.|||+ .|
T Consensus 20 ~ll~Cd~C~~~~H~~Cl~p----pl~~~p~g~W~C~-~C 53 (56)
T 2yql_A 20 QLLMCDTCSRVYHLDCLDP----PLKTIPKGMWICP-RC 53 (56)
T ss_dssp CCEECSSSSCEECSSSSSS----CCCSCCCSSCCCH-HH
T ss_pred eEEEcCCCCcceECccCCC----CcCCCCCCceECh-hh
Confidence 4899999999999999986 3344577899995 55
No 56
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=97.38 E-value=4.3e-05 Score=65.25 Aligned_cols=35 Identities=23% Similarity=0.484 Sum_probs=28.3
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|.++||..|+.| ++...|.+.|||+ .|.
T Consensus 19 ~ll~CD~C~~~fH~~Cl~p----pl~~~P~g~W~C~-~C~ 53 (66)
T 1xwh_A 19 ELICCDGCPRAFHLACLSP----PLREIPSGTWRCS-SCL 53 (66)
T ss_dssp SCEECSSCCCEECTTTSSS----CCSSCCSSCCCCH-HHH
T ss_pred CEEEcCCCChhhcccccCC----CcCcCCCCCeECc-ccc
Confidence 4899999999999999986 3344577899995 664
No 57
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.37 E-value=5.4e-05 Score=68.39 Aligned_cols=48 Identities=29% Similarity=0.754 Sum_probs=39.5
Q ss_pred CCCCCCcccccC--CCCceeeeCCCCCcCCCccCCCC--------------CCCCCCccCCccc
Q 002270 714 DDPNDDTCGICG--DGGDLICCDGCPSTFHQSCLDIQ--------------MLPPGDWHCPNCT 761 (944)
Q Consensus 714 ed~ndd~C~VCg--dgGdLLcCD~Cp~aFH~~CL~p~--------------~vP~g~W~Cp~C~ 761 (944)
..++|+.|.||. ..++|+.|..|++.||..||... ..+...|.|+.|.
T Consensus 11 ~~~~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 11 PVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CCCCSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred CCCCCcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 456899999998 67889999999999999999641 1245679999995
No 58
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.33 E-value=5.8e-05 Score=63.66 Aligned_cols=35 Identities=20% Similarity=0.567 Sum_probs=28.4
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|.++||+.|+.+. +...|.+.|||+ .|.
T Consensus 22 ~ll~CD~C~~~fH~~Cl~p~----l~~~p~g~W~C~-~C~ 56 (61)
T 2l5u_A 22 EIILCDTCPRAYHMVCLDPD----MEKAPEGKWSCP-HCE 56 (61)
T ss_dssp SEEECSSSSCEEEHHHHCTT----CCSCCCSSCCCT-TGG
T ss_pred cEEECCCCChhhhhhccCCC----CCCCCCCceECc-ccc
Confidence 48999999999999999863 334577899995 664
No 59
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.32 E-value=3.5e-05 Score=69.39 Aligned_cols=41 Identities=20% Similarity=0.530 Sum_probs=29.4
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
+.|+.|+.|.++||+.|+.|.........+.+.|||. .|..
T Consensus 31 ~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~-~C~~ 71 (88)
T 1wev_A 31 NQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCA-RCTR 71 (88)
T ss_dssp CCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCH-HHHH
T ss_pred CceEECCCCCCeEcCccCCCcccccccCCCCCCeeCc-cccc
Confidence 4599999999999999998742210012477899994 6644
No 60
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.23 E-value=0.0001 Score=64.85 Aligned_cols=44 Identities=27% Similarity=0.739 Sum_probs=35.5
Q ss_pred CCCcccccCC---CCceeeeC--CCCCcCCCccCCCCCCC-------CCCccCCccc
Q 002270 717 NDDTCGICGD---GGDLICCD--GCPSTFHQSCLDIQMLP-------PGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd---gGdLLcCD--~Cp~aFH~~CL~p~~vP-------~g~W~Cp~C~ 761 (944)
....| +|+. .|.||.|| .|..+||..|++++..+ ...|+|+.|.
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~ 70 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICR 70 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHH
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCC
Confidence 34567 7975 46799999 99999999999986544 2579999886
No 61
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.21 E-value=4.5e-05 Score=65.44 Aligned_cols=46 Identities=30% Similarity=0.784 Sum_probs=36.4
Q ss_pred CCCCcccccCCC----CceeeeC-CCCCcCCCccCCCCC--------CCCCCccCCccc
Q 002270 716 PNDDTCGICGDG----GDLICCD-GCPSTFHQSCLDIQM--------LPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdg----GdLLcCD-~Cp~aFH~~CL~p~~--------vP~g~W~Cp~C~ 761 (944)
+....|.+|..+ ..++.|| .|...||..|+++.. .|.+.|+|+.|.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 345689999853 3599999 999999999999853 377899999884
No 62
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.17 E-value=0.00021 Score=61.75 Aligned_cols=44 Identities=32% Similarity=0.716 Sum_probs=34.4
Q ss_pred CCCcccccCC---CCceeeeCCCCCcCCCccCCCCCC-CCCCccCCccc
Q 002270 717 NDDTCGICGD---GGDLICCDGCPSTFHQSCLDIQML-PPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd---gGdLLcCD~Cp~aFH~~CL~p~~v-P~g~W~Cp~C~ 761 (944)
....| +|+. ++.||.||.|..+||..|+++... ....|+|+.|.
T Consensus 18 ~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~ 65 (68)
T 3o70_A 18 GLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 65 (68)
T ss_dssp TCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHH
T ss_pred CceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCC
Confidence 44567 8875 345999999999999999998642 23689999885
No 63
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.15 E-value=0.00013 Score=63.29 Aligned_cols=36 Identities=28% Similarity=0.645 Sum_probs=27.3
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
.|+.|+.|+.+||..|+.+.. ...+...|||+ .|..
T Consensus 32 ~mi~CD~C~~wfH~~Cv~~~~----~~~~~~~w~C~-~C~~ 67 (75)
T 2k16_A 32 PMIGCDDCDDWYHWPCVGIMA----APPEEMQWFCP-KCAN 67 (75)
T ss_dssp CEEECSSSSSEEEHHHHTCSS----CCCSSSCCCCT-TTHH
T ss_pred CEEEcCCCCcccccccCCCCc----cCCCCCCEECh-hccC
Confidence 489999999999999998632 22245789995 6643
No 64
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.15 E-value=0.00014 Score=62.79 Aligned_cols=46 Identities=33% Similarity=0.819 Sum_probs=35.4
Q ss_pred CCCCCcccccCCC---C-ceeeeCCCCCcCCCccCCCCC--CCCCCccCCccc
Q 002270 715 DPNDDTCGICGDG---G-DLICCDGCPSTFHQSCLDIQM--LPPGDWHCPNCT 761 (944)
Q Consensus 715 d~ndd~C~VCgdg---G-dLLcCD~Cp~aFH~~CL~p~~--vP~g~W~Cp~C~ 761 (944)
+.....| +|+.. | .||.||.|..+||..|+++.. .....|+|+.|.
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~ 64 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCI 64 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHH
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCcc
Confidence 3344578 69753 4 599999999999999999863 234789999886
No 65
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.06 E-value=9.5e-05 Score=62.50 Aligned_cols=39 Identities=23% Similarity=0.542 Sum_probs=27.9
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
+.|+.|+.|+++||+.|+.+..... ...+.+.|||+ .|.
T Consensus 21 ~~ll~Cd~C~~~~H~~C~~p~l~~~-~~~p~~~W~C~-~C~ 59 (66)
T 2yt5_A 21 NEMVICDKCGQGYHQLCHTPHIDSS-VIDSDEKWLCR-QCV 59 (66)
T ss_dssp BCEEECSSSCCEEETTTSSSCCCHH-HHHSSCCCCCH-HHH
T ss_pred CCEEECCCCChHHHhhhCCCccccc-ccCCCCCEECC-CCc
Confidence 4699999999999999998732110 01256899994 664
No 66
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.06 E-value=0.00011 Score=64.60 Aligned_cols=44 Identities=32% Similarity=0.728 Sum_probs=34.7
Q ss_pred CCCcccccCC----CCceeeeCCCCCcCCCccCCCCCC---CCCCccCCccc
Q 002270 717 NDDTCGICGD----GGDLICCDGCPSTFHQSCLDIQML---PPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd----gGdLLcCD~Cp~aFH~~CL~p~~v---P~g~W~Cp~C~ 761 (944)
....| +|+. .+.||.||.|..+||..|+++... ....|+|+.|.
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~ 61 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCE 61 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTT
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcc
Confidence 34467 7875 457999999999999999998542 23689999886
No 67
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.03 E-value=0.00015 Score=63.25 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=28.2
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
+.|+.|+.|+++||..|+.+.. .|.+.|||+ .|..
T Consensus 31 ~~ll~CD~C~~~~H~~Cl~~~~------vP~g~W~C~-~C~~ 65 (71)
T 2ku3_A 31 NVILFCDMCNLAVHQECYGVPY------IPEGQWLCR-HCLQ 65 (71)
T ss_dssp SCEEECSSSCCEEEHHHHTCSS------CCSSCCCCH-HHHH
T ss_pred CCEEECCCCCCccccccCCCCc------CCCCCcCCc-cCcC
Confidence 4689999999999999998631 467899994 6643
No 68
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=96.97 E-value=0.00022 Score=71.12 Aligned_cols=35 Identities=26% Similarity=0.465 Sum_probs=28.5
Q ss_pred eecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 783 LLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 783 Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
++.|+.|.++||..|+.| ++...|.+.|+|+ .|..
T Consensus 16 ll~Cd~C~~~~H~~C~~p----~l~~~p~~~W~C~-~C~~ 50 (184)
T 3o36_A 16 LLCCEKCPKVFHLSCHVP----TLTNFPSGEWICT-FCRD 50 (184)
T ss_dssp CEECSSSSCEECTTTSSS----CCSSCCSSCCCCT-TTSC
T ss_pred eeecCCCCcccCccccCC----CCCCCCCCCEECc-cccC
Confidence 799999999999999986 3345577899995 6754
No 69
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=96.93 E-value=0.0002 Score=72.89 Aligned_cols=36 Identities=25% Similarity=0.434 Sum_probs=28.9
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
.|+.|+.|+++||..|+.| ++...|.+.|||+ .|..
T Consensus 18 ~ll~Cd~C~~~~H~~Cl~p----~l~~~p~~~W~C~-~C~~ 53 (207)
T 3u5n_A 18 DLLCCEKCPKVFHLTCHVP----TLLSFPSGDWICT-FCRD 53 (207)
T ss_dssp EEEECSSSSCEECTTTSSS----CCSSCCSSCCCCT-TTSC
T ss_pred ceEEcCCCCCccCCccCCC----CCCCCCCCCEEeC-ceeC
Confidence 4899999999999999986 3345677899996 5653
No 70
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.91 E-value=0.00037 Score=59.75 Aligned_cols=42 Identities=29% Similarity=0.669 Sum_probs=32.4
Q ss_pred CcccccCC---CCceeeeCC--CCCcCCCccCCCCCCCC------CCccCCccc
Q 002270 719 DTCGICGD---GGDLICCDG--CPSTFHQSCLDIQMLPP------GDWHCPNCT 761 (944)
Q Consensus 719 d~C~VCgd---gGdLLcCD~--Cp~aFH~~CL~p~~vP~------g~W~Cp~C~ 761 (944)
..| +|+. .|.||.||. |..+||..|+++...|. ..|+|+.|+
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCR 63 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHH
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCcc
Confidence 356 6863 578999995 99999999999754332 369999985
No 71
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=96.91 E-value=0.00022 Score=58.27 Aligned_cols=42 Identities=33% Similarity=0.727 Sum_probs=32.2
Q ss_pred cccccCC----CCceeeeC-CCCCcCCCccCCCCCCC--CCCccCCccc
Q 002270 720 TCGICGD----GGDLICCD-GCPSTFHQSCLDIQMLP--PGDWHCPNCT 761 (944)
Q Consensus 720 ~C~VCgd----gGdLLcCD-~Cp~aFH~~CL~p~~vP--~g~W~Cp~C~ 761 (944)
.|.+|.. ++.++.|| .|...||..|+++...+ ...|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 3566764 34599999 89999999999986422 3789999984
No 72
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=96.91 E-value=0.00018 Score=64.97 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=27.9
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
+.|+.|+.|..+||+.|+.+.. .|.+.|||+ .|.
T Consensus 40 ~~ll~CD~C~~~fH~~Cl~p~~------vP~g~W~C~-~C~ 73 (88)
T 2l43_A 40 NVILFCDMCNLAVHQECYGVPY------IPEGQWLCR-HCL 73 (88)
T ss_dssp EEEEECSSSCCCCCHHHHTCSS------CCSSCCCCH-HHH
T ss_pred CCEEECCCCCchhhcccCCCCc------cCCCceECc-ccc
Confidence 4699999999999999998631 467899995 664
No 73
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=96.90 E-value=0.00026 Score=71.53 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=28.3
Q ss_pred eecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 783 LLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 783 Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
++.|+.|+++||..|+.| ++...|.+.|+|+ .|..
T Consensus 14 ll~Cd~C~~~~H~~Cl~p----~l~~~p~g~W~C~-~C~~ 48 (189)
T 2ro1_A 14 LVMCNQCEFCFHLDCHLP----ALQDVPGEEWSCS-LCHV 48 (189)
T ss_dssp CCCCTTTCCBCCSTTSTT----CCSSCCCTTCCTT-TTSC
T ss_pred eeECCCCCchhccccCCC----CcccCCCCCCCCc-CccC
Confidence 789999999999999986 3344577899995 6654
No 74
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=96.59 E-value=0.00076 Score=61.80 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=25.9
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|.++||..|+.+.. ...| ..|||+ .|.
T Consensus 41 ~mi~Cd~C~~w~H~~C~~~~~----~~~p-~~w~C~-~C~ 74 (98)
T 2lv9_A 41 YMICCDKCSVWQHIDCMGIDR----QHIP-DTYLCE-RCQ 74 (98)
T ss_dssp CEEEBTTTCBEEETTTTTCCT----TSCC-SSBCCT-TTS
T ss_pred cEEEcCCCCCcCcCcCCCCCc----cCCC-CCEECC-CCc
Confidence 589999999999999998632 2223 479995 675
No 75
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.47 E-value=0.00072 Score=58.96 Aligned_cols=42 Identities=36% Similarity=0.843 Sum_probs=33.3
Q ss_pred CcccccCC----CCceeeeCCCCCcCCCccCCCCCCCC---CCccCCccc
Q 002270 719 DTCGICGD----GGDLICCDGCPSTFHQSCLDIQMLPP---GDWHCPNCT 761 (944)
Q Consensus 719 d~C~VCgd----gGdLLcCD~Cp~aFH~~CL~p~~vP~---g~W~Cp~C~ 761 (944)
..| +|+. ++.||.||.|...||..|+++...+. ..|+|+.|.
T Consensus 11 ~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~ 59 (75)
T 3kqi_A 11 VYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCE 59 (75)
T ss_dssp EET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHH
T ss_pred eEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCc
Confidence 345 7874 35799999999999999999865432 579999886
No 76
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.34 E-value=0.0012 Score=53.83 Aligned_cols=39 Identities=31% Similarity=0.737 Sum_probs=31.1
Q ss_pred ccC---CCCceeeeCCCCCcCCCccCCCCCC-CCCCccCCccc
Q 002270 723 ICG---DGGDLICCDGCPSTFHQSCLDIQML-PPGDWHCPNCT 761 (944)
Q Consensus 723 VCg---dgGdLLcCD~Cp~aFH~~CL~p~~v-P~g~W~Cp~C~ 761 (944)
+|+ +++.||.||.|...||..|+++... ....|+|+.|.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~ 50 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 50 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHH
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCC
Confidence 465 3458999999999999999998642 23689999884
No 77
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=96.24 E-value=0.0016 Score=59.39 Aligned_cols=36 Identities=17% Similarity=0.461 Sum_probs=27.4
Q ss_pred ceecCccch---hhhhccccccccccccCCCCCccceeCccchhh
Q 002270 782 ALLPCAMCE---KKYHKLCMQEMDALSDNLTGLVTSFCGRKCQEL 823 (944)
Q Consensus 782 ~Ll~CdqCe---R~YHv~CL~p~~~~pl~~~p~~~WFCs~~CkeI 823 (944)
.|+.||.|+ .|||..|+... ..+.+.|||+..|..+
T Consensus 38 ~MI~CD~c~C~~eWfH~~CVgl~------~~p~~~W~Cp~cC~~~ 76 (90)
T 2jmi_A 38 PMVACDNPACPFEWFHYGCVGLK------QAPKGKWYCSKDCKEI 76 (90)
T ss_dssp SEECCCSSSCSCSCEETTTSSCS------SCTTSCCCSSHHHHHH
T ss_pred CEEEecCCCCccccCcCccCCCC------cCCCCCccCChhhcch
Confidence 489999977 89999999742 2245789997558754
No 78
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.00 E-value=0.00091 Score=76.56 Aligned_cols=44 Identities=34% Similarity=0.809 Sum_probs=35.2
Q ss_pred CCCcccccCC----CCceeeeCCCCCcCCCccCCCCCCCC---CCccCCccc
Q 002270 717 NDDTCGICGD----GGDLICCDGCPSTFHQSCLDIQMLPP---GDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgd----gGdLLcCD~Cp~aFH~~CL~p~~vP~---g~W~Cp~C~ 761 (944)
....| +|+. ++.|+.||.|...||..|+++...+. ..|+|+.|.
T Consensus 36 ~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~ 86 (488)
T 3kv5_D 36 PPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86 (488)
T ss_dssp CCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHH
T ss_pred CCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCc
Confidence 33456 7874 46799999999999999999865432 579999997
No 79
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=95.99 E-value=0.0011 Score=61.54 Aligned_cols=54 Identities=20% Similarity=0.455 Sum_probs=33.7
Q ss_pred ccccccCCCCCCCCCCCCCCCcceecCc-cchhhhhccccccccccccC--CCCCccceeCccchh
Q 002270 760 CTCKFCGLAGEDDAEGDDTTTSALLPCA-MCEKKYHKLCMQEMDALSDN--LTGLVTSFCGRKCQE 822 (944)
Q Consensus 760 C~C~iCG~~~~ds~eed~~s~~~Ll~Cd-qCeR~YHv~CL~p~~~~pl~--~~p~~~WFCs~~Cke 822 (944)
+.|.+|+++..++ ..|+.|+ .|+.|||..|+.-....... ..+...|+|+ .|..
T Consensus 4 ~~C~iC~~p~~~~--------~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp-~C~~ 60 (105)
T 2xb1_A 4 YPCGACRSEVNDD--------QDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACD-LCLK 60 (105)
T ss_dssp CBCTTTCSBCCTT--------SCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCH-HHHH
T ss_pred CCCCCCCCccCCC--------CCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECc-cccC
Confidence 3455666664321 2488997 99999999998753211110 1245789995 6653
No 80
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=95.97 E-value=0.0018 Score=65.57 Aligned_cols=43 Identities=28% Similarity=0.791 Sum_probs=33.4
Q ss_pred CcccccCC---CC----ceeeeCCCCCcCCCccCCCCC--------CCC-CCccCCccc
Q 002270 719 DTCGICGD---GG----DLICCDGCPSTFHQSCLDIQM--------LPP-GDWHCPNCT 761 (944)
Q Consensus 719 d~C~VCgd---gG----dLLcCD~Cp~aFH~~CL~p~~--------vP~-g~W~Cp~C~ 761 (944)
..|.+|+. .+ .||.||.|..+||..|+++.. .|+ ..|+|+.|.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~ 61 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 61 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCC
Confidence 46888863 23 499999999999999999852 232 379999996
No 81
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=95.88 E-value=0.0019 Score=63.24 Aligned_cols=40 Identities=18% Similarity=0.434 Sum_probs=27.9
Q ss_pred cceecCccchhhhhccccccccccc-c-CC-CCCccceeCccch
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALS-D-NL-TGLVTSFCGRKCQ 821 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~p-l-~~-~p~~~WFCs~~Ck 821 (944)
+.|+.|+.|.+.||..|+.+..... + .. .+.+.|+|+ .|.
T Consensus 73 G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~-~C~ 115 (142)
T 2lbm_A 73 GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCY-ICH 115 (142)
T ss_dssp SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCT-TTC
T ss_pred CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEee-ccc
Confidence 3589999999999999998642110 1 11 367899996 443
No 82
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=95.71 E-value=0.0038 Score=72.03 Aligned_cols=34 Identities=26% Similarity=0.721 Sum_probs=28.7
Q ss_pred CceeeeCCCCCcCCCccCCCCCC---CCCCccCCccc
Q 002270 728 GDLICCDGCPSTFHQSCLDIQML---PPGDWHCPNCT 761 (944)
Q Consensus 728 GdLLcCD~Cp~aFH~~CL~p~~v---P~g~W~Cp~C~ 761 (944)
..++.||.|...||..|+++... ....|+||.|.
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~ 92 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCV 92 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCc
Confidence 35999999999999999998642 23679999997
No 83
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=95.58 E-value=0.00094 Score=57.29 Aligned_cols=39 Identities=18% Similarity=0.457 Sum_probs=26.3
Q ss_pred ceecCc-cchhhhhcccccccccc--ccCCCCCccceeCccch
Q 002270 782 ALLPCA-MCEKKYHKLCMQEMDAL--SDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~Cd-qCeR~YHv~CL~p~~~~--pl~~~p~~~WFCs~~Ck 821 (944)
.++.|+ .|.++||..|+.-.... .+...+...|+|+ .|.
T Consensus 23 ~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~-~C~ 64 (65)
T 2vpb_A 23 DAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCD-TCM 64 (65)
T ss_dssp CEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCH-HHH
T ss_pred CeEecccCccccCchhccCCCHHHHHHhhccCCCcEECc-Ccc
Confidence 589999 99999999998743211 1111255789994 553
No 84
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=95.51 E-value=0.004 Score=52.32 Aligned_cols=36 Identities=22% Similarity=0.552 Sum_probs=25.4
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|+.|||..|+........ ....|+|+ .|.
T Consensus 21 ~mI~Cd~C~~WfH~~Cvgl~~~~~~---~~~~~~C~-~C~ 56 (64)
T 1we9_A 21 FWICCDLCEMWFHGKCVKITPARAE---HIKQYKCP-SCS 56 (64)
T ss_dssp CEEECSSSCCEEETTTTTCCTTGGG---GCSSCCCH-HHH
T ss_pred CEEEccCCCCCCCccccCcChhHhc---CCCcEECC-CCc
Confidence 5899999999999999875322111 12579984 664
No 85
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=95.20 E-value=0.0037 Score=62.33 Aligned_cols=49 Identities=29% Similarity=0.805 Sum_probs=40.4
Q ss_pred CCCCCCCcccccCCCCceeeeC--CCCCcCCCccCCC----C----CCCCCCccCCccc
Q 002270 713 GDDPNDDTCGICGDGGDLICCD--GCPSTFHQSCLDI----Q----MLPPGDWHCPNCT 761 (944)
Q Consensus 713 ged~ndd~C~VCgdgGdLLcCD--~Cp~aFH~~CL~p----~----~vP~g~W~Cp~C~ 761 (944)
++|..+..|.+|++||+|++|+ .|+++|-..|+.. . .....+|.|-.|.
T Consensus 74 DeDG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~ 132 (159)
T 3a1b_A 74 DDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCG 132 (159)
T ss_dssp CTTSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTC
T ss_pred CCCCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecC
Confidence 4456788999999999999999 7999999999963 1 2456789998775
No 86
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.02 E-value=0.0055 Score=49.98 Aligned_cols=48 Identities=19% Similarity=0.572 Sum_probs=32.2
Q ss_pred ccccccCCCCCCCCCCCCCCCcceecCc-cchhhhhccccccccccccCCCCCccceeCccc
Q 002270 760 CTCKFCGLAGEDDAEGDDTTTSALLPCA-MCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKC 820 (944)
Q Consensus 760 C~C~iCG~~~~ds~eed~~s~~~Ll~Cd-qCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~C 820 (944)
|.|.+|+.+..+. ..|+.|+ .|+.+||..|+.-..... ....|+|+ .|
T Consensus 3 c~cc~C~~p~~~~--------~~mI~Cd~~C~~WfH~~Cvgl~~~~~----~~~~~~C~-~C 51 (52)
T 2kgg_A 3 CAAQNCQRPCKDK--------VDWVQCDGGCDEWFHQVCVGVSPEMA----ENEDYICI-NC 51 (52)
T ss_dssp CSCTTCCCCCCTT--------CCEEECTTTTCCEEETTTTTCCHHHH----HHSCCCCS-CC
T ss_pred ccCCCCcCccCCC--------CcEEEeCCCCCccCcccccCCCcccc----CCCCEECC-CC
Confidence 5566777766422 3589999 899999999987532211 12679985 44
No 87
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=94.94 E-value=0.01 Score=51.71 Aligned_cols=33 Identities=21% Similarity=0.581 Sum_probs=25.3
Q ss_pred ceecCcc--ch-hhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAM--CE-KKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~Cdq--Ce-R~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+. |. .+||..|+... ..+.+.|||+ .|.
T Consensus 28 ~MI~CD~~~C~~~wfH~~Cvgl~------~~p~g~w~Cp-~C~ 63 (71)
T 1wen_A 28 EMIGCDNPDCSIEWFHFACVGLT------TKPRGKWFCP-RCS 63 (71)
T ss_dssp SEECCSCSSCSCCCEETTTTTCS------SCCSSCCCCT-TTS
T ss_pred CEeEeeCCCCCCccEecccCCcC------cCCCCCEECC-CCC
Confidence 5899999 77 79999999732 2345789996 664
No 88
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=94.90 E-value=0.0076 Score=56.43 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=25.5
Q ss_pred ceecCc--cchhhhhccccccccccccCCCCCccceeCc
Q 002270 782 ALLPCA--MCEKKYHKLCMQEMDALSDNLTGLVTSFCGR 818 (944)
Q Consensus 782 ~Ll~Cd--qCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~ 818 (944)
.|+.|+ .|.++||..|+.. ...|.+.|||+.
T Consensus 26 ~ll~CD~~~Cp~~fH~~Cl~L------~~~P~g~W~Cp~ 58 (107)
T 4gne_A 26 ELVMCDKKDCPKAYHLLCLNL------TQPPYGKWECPW 58 (107)
T ss_dssp EEEECCSTTCCCEECTGGGTC------SSCCSSCCCCGG
T ss_pred cEeEECCCCCCcccccccCcC------CcCCCCCEECCC
Confidence 589999 8999999999972 234678999974
No 89
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=94.67 E-value=0.01 Score=51.16 Aligned_cols=36 Identities=25% Similarity=0.413 Sum_probs=26.0
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
.|+.|+.|..|||..|+...... .....|+|+ .|..
T Consensus 30 ~mI~Cd~C~~W~H~~Cvg~~~~~----~~~~~~~C~-~C~~ 65 (72)
T 1wee_A 30 RMLACDGCGVWHHTRCIGINNAD----ALPSKFLCF-RCIE 65 (72)
T ss_dssp CEEECSSSCEEEETTTTTCCTTS----CCCSCCCCH-HHHH
T ss_pred cEEECCCCCCccCCeeeccCccc----cCCCcEECC-CccC
Confidence 48999999999999998753211 123689994 6643
No 90
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=94.56 E-value=0.012 Score=53.72 Aligned_cols=33 Identities=21% Similarity=0.581 Sum_probs=25.0
Q ss_pred ceecCcc--ch-hhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAM--CE-KKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~Cdq--Ce-R~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+. |. .|||..|+... ..+.+.|||+ .|.
T Consensus 48 ~MI~CD~~dC~~~WfH~~CVgl~------~~p~g~W~Cp-~C~ 83 (91)
T 1weu_A 48 EMIGCDNPDCSIEWFHFACVGLT------TKPRGKWFCP-RCS 83 (91)
T ss_dssp CCCCCSCSSCSCCCCCSTTTTCS------SCCCSSCCCT-TTC
T ss_pred CEeEecCCCCCCCCEecccCCcC------cCCCCCEECc-Ccc
Confidence 4899999 76 79999999742 1245789996 664
No 91
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=94.45 E-value=0.0083 Score=50.45 Aligned_cols=33 Identities=21% Similarity=0.581 Sum_probs=24.9
Q ss_pred ceecCcc--ch-hhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAM--CE-KKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~Cdq--Ce-R~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+. |. .+||..|+... ..|.+.|||+ .|.
T Consensus 22 ~mi~CD~cdC~~~wfH~~Cvgl~------~~p~g~w~C~-~C~ 57 (60)
T 2vnf_A 22 EMIGCDNPDCSIEWFHFACVGLT------TKPRGKWFCP-RCS 57 (60)
T ss_dssp EEEECSCTTCSSCEEETGGGTCS------SCCSSCCCCH-HHH
T ss_pred CEEEeCCCCCCCceEehhcCCCC------cCCCCCEECc-Ccc
Confidence 5899999 55 89999999832 2345789996 564
No 92
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=94.41 E-value=0.0065 Score=59.78 Aligned_cols=39 Identities=21% Similarity=0.495 Sum_probs=27.7
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccchhhH
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQELS 824 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~CkeI~ 824 (944)
.|+.|+.|++|||..|+...... ......|+|+ .|....
T Consensus 22 ~mi~Cd~C~~WfH~~Cv~~~~~~---~~~~~~~~C~-~C~~~~ 60 (174)
T 2ri7_A 22 FYIGCDRCQNWYHGRCVGILQSE---AELIDEYVCP-QCQSTE 60 (174)
T ss_dssp CEEECTTTCCEEEHHHHTCCHHH---HTTCSSCCCH-HHHHHH
T ss_pred CEeECCCCCchhChhhcCCchhh---ccCccCeecC-CCcchh
Confidence 58999999999999998743211 1134689995 776543
No 93
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=94.31 E-value=0.013 Score=50.49 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=25.4
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|..|||..|+..... . ....|+|+ .|.
T Consensus 32 ~MIqCd~C~~WfH~~Cvgi~~~----~-~~~~~~C~-~C~ 65 (68)
T 3o70_A 32 PMIECNECHTWIHLSCAKIRKS----N-VPEVFVCQ-KCR 65 (68)
T ss_dssp CEEECTTTCCEEETTTTTCCTT----S-CCSSCCCH-HHH
T ss_pred CEEECCCCCccccccccCcCcc----c-CCCcEECC-CCC
Confidence 5899999999999999985322 1 12689994 554
No 94
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.27 E-value=0.0037 Score=70.93 Aligned_cols=39 Identities=36% Similarity=0.790 Sum_probs=32.1
Q ss_pred ccCC----CCceeeeCCCCCcCCCccCCCCCCC---CCCccCCccc
Q 002270 723 ICGD----GGDLICCDGCPSTFHQSCLDIQMLP---PGDWHCPNCT 761 (944)
Q Consensus 723 VCgd----gGdLLcCD~Cp~aFH~~CL~p~~vP---~g~W~Cp~C~ 761 (944)
+|+. ++.|+.||.|...||..|+++...+ ...|+|+.|.
T Consensus 9 iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~ 54 (447)
T 3kv4_A 9 LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54 (447)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHH
T ss_pred eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCc
Confidence 6764 4679999999999999999986432 2679999997
No 95
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.20 E-value=0.023 Score=49.31 Aligned_cols=35 Identities=14% Similarity=0.413 Sum_probs=26.5
Q ss_pred ceecCccch---hhhhccccccccccccCCCCCccceeCccchhh
Q 002270 782 ALLPCAMCE---KKYHKLCMQEMDALSDNLTGLVTSFCGRKCQEL 823 (944)
Q Consensus 782 ~Ll~CdqCe---R~YHv~CL~p~~~~pl~~~p~~~WFCs~~CkeI 823 (944)
.|+.||.|+ .+||..|+.... .+.+.|||+ .|...
T Consensus 18 ~MI~CD~cdC~~~WfH~~Cvgl~~------~p~~~w~Cp-~C~~~ 55 (70)
T 1x4i_A 18 EMVGCDNQDCPIEWFHYGCVGLTE------APKGKWYCP-QCTAA 55 (70)
T ss_dssp SEECCSCTTCSCCCEEHHHHTCSS------CCSSCCCCH-HHHHH
T ss_pred CEeEeCCCCCCccCCcccccccCc------CCCCCEECC-CCCcc
Confidence 589999985 899999998422 246889995 66543
No 96
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=94.19 E-value=0.0096 Score=50.02 Aligned_cols=33 Identities=21% Similarity=0.577 Sum_probs=25.0
Q ss_pred ceecCcc--ch-hhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAM--CE-KKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~Cdq--Ce-R~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.||. |. .+||..|+.-. ..+.+.|||+ .|.
T Consensus 21 ~mi~CD~~~C~~~wfH~~Cvgl~------~~p~~~w~Cp-~C~ 56 (59)
T 3c6w_A 21 EMIGCDNPDCPIEWFHFACVDLT------TKPKGKWFCP-RCV 56 (59)
T ss_dssp EEEECSCTTCSSCEEETGGGTCS------SCCSSCCCCH-HHH
T ss_pred CeeEeeCCCCCCCCEecccCCcc------cCCCCCEECc-Ccc
Confidence 5899999 77 69999999832 2245789995 553
No 97
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=94.17 E-value=0.012 Score=50.03 Aligned_cols=33 Identities=18% Similarity=0.438 Sum_probs=25.1
Q ss_pred ceecCccch---hhhhccccccccccccCCCCCccceeCccch
Q 002270 782 ALLPCAMCE---KKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~CdqCe---R~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
.|+.|+.|+ .+||..|+.... .+.+.|||+ .|.
T Consensus 23 ~MI~CD~c~C~~~WfH~~Cvgl~~------~p~~~w~Cp-~C~ 58 (62)
T 2g6q_A 23 EMIGCDNEQCPIEWFHFSCVSLTY------KPKGKWYCP-KCR 58 (62)
T ss_dssp EEEECSCTTCSSCEEETGGGTCSS------CCSSCCCCH-HHH
T ss_pred CeeeeeCCCCCcccEecccCCcCc------CCCCCEECc-Ccc
Confidence 589999944 999999998421 245889996 564
No 98
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=94.05 E-value=0.012 Score=51.58 Aligned_cols=38 Identities=16% Similarity=0.568 Sum_probs=26.7
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
..|+.|+.|+.|||..|+.-..... .....|+|+ .|..
T Consensus 25 ~~MIqCd~C~~WfH~~Cvgl~~~~~---~~~~~~~C~-~C~~ 62 (79)
T 1wep_A 25 HFMIECGLCQDWFHGSCVGIEEENA---VDIDIYHCP-DCEA 62 (79)
T ss_dssp SCEEEBTTTCCEEEHHHHTCCHHHH---TTCSBBCCT-TTTT
T ss_pred CceEEcCCCCCcEEeeecCcccccc---cCCCeEECC-Cccc
Confidence 3589999999999999987532211 123679995 6654
No 99
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=93.78 E-value=0.021 Score=48.87 Aligned_cols=41 Identities=17% Similarity=0.408 Sum_probs=26.9
Q ss_pred cceecCc--cchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 781 SALLPCA--MCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~Cd--qCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
+.|+.|+ .|..|||..|+.-.............||| ..|+.
T Consensus 22 g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C-~~Cr~ 64 (68)
T 2rsd_A 22 DSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYC-ELCRL 64 (68)
T ss_dssp SCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCC-HHHHH
T ss_pred CCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEEC-cCccC
Confidence 3589998 69999999998643222222122357999 46753
No 100
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=93.73 E-value=0.02 Score=64.04 Aligned_cols=49 Identities=29% Similarity=0.748 Sum_probs=40.3
Q ss_pred CCCCCCCcccccCCCCceeeeC--CCCCcCCCccCCCC--------CCCCCCccCCccc
Q 002270 713 GDDPNDDTCGICGDGGDLICCD--GCPSTFHQSCLDIQ--------MLPPGDWHCPNCT 761 (944)
Q Consensus 713 ged~ndd~C~VCgdgGdLLcCD--~Cp~aFH~~CL~p~--------~vP~g~W~Cp~C~ 761 (944)
++|..+..|.+|+++|+|++|| .|+++|-..|+..- ......|.|-.|.
T Consensus 88 D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~ 146 (386)
T 2pv0_B 88 DDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCL 146 (386)
T ss_dssp CSSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTS
T ss_pred CCCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcC
Confidence 3466788999999999999999 89999999999631 1334789998886
No 101
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=93.37 E-value=0.035 Score=50.39 Aligned_cols=65 Identities=18% Similarity=0.456 Sum_probs=42.0
Q ss_pred ccCCCCCCCCCCccCCcccccccCCCCCCCCCCCCCCCcceecCccchhhhhccccccccc--------cccCCCCCccc
Q 002270 743 SCLDIQMLPPGDWHCPNCTCKFCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDA--------LSDNLTGLVTS 814 (944)
Q Consensus 743 ~CL~p~~vP~g~W~Cp~C~C~iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~--------~pl~~~p~~~W 814 (944)
.|+++...+..+-.|.-| .... ...++.|..|.|.||..||..... ..+.......|
T Consensus 4 ~~~~~~e~~~~D~~C~VC-----~~~t----------~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GW 68 (89)
T 1wil_A 4 GSSGPREPVVNDEMCDVC-----EVWT----------AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGW 68 (89)
T ss_dssp CCCCSCCCCCCSCCCTTT-----CCCC----------SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSC
T ss_pred cccCcccCCCCCcccCcc-----cccc----------ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCc
Confidence 466664433455556644 3322 234799999999999999987522 22334467889
Q ss_pred eeCccchhh
Q 002270 815 FCGRKCQEL 823 (944)
Q Consensus 815 FCs~~CkeI 823 (944)
.| .+|..+
T Consensus 69 SC-~~CenL 76 (89)
T 1wil_A 69 SC-HYCDNI 76 (89)
T ss_dssp CC-TTTCCC
T ss_pred cc-cccchh
Confidence 99 588665
No 102
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=92.65 E-value=0.0085 Score=52.06 Aligned_cols=40 Identities=23% Similarity=0.443 Sum_probs=25.9
Q ss_pred ceecCccchhhhhccccccccccccCC-CCCccceeCccchh
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNL-TGLVTSFCGRKCQE 822 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~-~p~~~WFCs~~Cke 822 (944)
.|+.|+.|+.|||..|+.......... .....|+|+ .|..
T Consensus 29 ~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~-~C~~ 69 (76)
T 1wem_A 29 FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP-NCTI 69 (76)
T ss_dssp CEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCH-HHHH
T ss_pred CEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECc-CCcC
Confidence 589999999999999987532110000 013579995 6643
No 103
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=92.38 E-value=0.035 Score=45.13 Aligned_cols=35 Identities=20% Similarity=0.449 Sum_probs=25.6
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccch
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Ck 821 (944)
..|+.|+.|..+||..|+...... ....|+|+ .|.
T Consensus 16 ~~MI~Cd~C~~W~H~~Cvgi~~~~-----~~~~~~C~-~C~ 50 (52)
T 3o7a_A 16 RPMIECNECHTWIHLSCAKIRKSN-----VPEVFVCQ-KCR 50 (52)
T ss_dssp CCEEECTTTCCEEETTTTTCCGGG-----CCSSCCCH-HHH
T ss_pred CCEEEcCCCCccccccccCCCccc-----CCCcEECc-CCC
Confidence 358999999999999998854321 12579984 554
No 104
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=92.37 E-value=0.025 Score=49.22 Aligned_cols=37 Identities=16% Similarity=0.565 Sum_probs=26.0
Q ss_pred ceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 782 ALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 782 ~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
.|+.|+.|+.+||..|+....... .....|+|+ .|..
T Consensus 24 ~MI~Cd~C~~WfH~~Cvg~~~~~~---~~~~~~~C~-~C~~ 60 (75)
T 3kqi_A 24 FMIECDACKDWFHGSCVGVEEEEA---PDIDIYHCP-NCEK 60 (75)
T ss_dssp CEEECTTTCCEEEHHHHTCCTTTG---GGBSSCCCH-HHHH
T ss_pred CEEEcCCCCCCEeccccccccccc---CCCCEEECC-CCcc
Confidence 589999999999999987532211 112579985 7754
No 105
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=90.79 E-value=0.052 Score=49.83 Aligned_cols=35 Identities=29% Similarity=0.742 Sum_probs=28.2
Q ss_pred eeeeCCCCCcCCCccCCCC--------CCC-CCCccCCcccccc
Q 002270 730 LICCDGCPSTFHQSCLDIQ--------MLP-PGDWHCPNCTCKF 764 (944)
Q Consensus 730 LLcCD~Cp~aFH~~CL~p~--------~vP-~g~W~Cp~C~C~i 764 (944)
|+.||.|..+||..|+++. ..| ...|.||.|....
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 7899999999999999874 245 3469999997543
No 106
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=90.78 E-value=0.11 Score=45.51 Aligned_cols=41 Identities=22% Similarity=0.396 Sum_probs=26.8
Q ss_pred cceecCc--cchhhhhcccccccccccc-CCCCCccceeCccchh
Q 002270 781 SALLPCA--MCEKKYHKLCMQEMDALSD-NLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~Cd--qCeR~YHv~CL~p~~~~pl-~~~p~~~WFCs~~Cke 822 (944)
..|+.|+ .|..|||..|+.-...... .......|||+ .|..
T Consensus 28 g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~-~C~~ 71 (78)
T 1wew_A 28 DSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCE-ICRL 71 (78)
T ss_dssp SCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCH-HHHH
T ss_pred CCEEEECCccCCccccCEEEccccccccccccCCCCEECC-CCCc
Confidence 3599999 9999999999874322110 00123689995 6643
No 107
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=89.96 E-value=0.13 Score=59.68 Aligned_cols=38 Identities=26% Similarity=0.475 Sum_probs=27.3
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
..|+.||.|+.|||..|+.-... .......|+|+ .|..
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~---~a~~~~~y~Cp-~C~~ 93 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQF---EYYLYEKFFCP-KCVP 93 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGG---GTTTEEECCCT-TTHH
T ss_pred CCEEECCCCCcCCCCcCCCCChh---HhcCCCeEECc-CCcC
Confidence 46899999999999999874321 11234789996 5764
No 108
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=88.60 E-value=0.078 Score=60.84 Aligned_cols=38 Identities=16% Similarity=0.527 Sum_probs=26.4
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
..|+.|+.|+.|||..|+.-..... .....|+|+ .|..
T Consensus 50 ~~MIqCd~C~~WfH~~Cvgl~~~~~---~~~~~~~C~-~C~~ 87 (488)
T 3kv5_D 50 RFMIECDICKDWFHGSCVGVEEHHA---VDIDLYHCP-NCAV 87 (488)
T ss_dssp SCEEEBTTTCCEEEHHHHTCCGGGG---GGEEEBCCH-HHHH
T ss_pred CCeEEccCCCCceeeeecCcCcccc---cCCCEEECC-CCcC
Confidence 3589999999999999987432211 112679995 6654
No 109
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=88.41 E-value=0.056 Score=52.26 Aligned_cols=40 Identities=18% Similarity=0.453 Sum_probs=27.5
Q ss_pred cceecCccchhhhhcccccccccc--ccCC-CCCccceeCccch
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDAL--SDNL-TGLVTSFCGRKCQ 821 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~--pl~~-~p~~~WFCs~~Ck 821 (944)
+.++.|+.|.+.||..|+.+.... .... .+.+.|+|. .|.
T Consensus 67 G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~-~C~ 109 (129)
T 3ql9_A 67 GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCY-ICH 109 (129)
T ss_dssp SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCT-TTC
T ss_pred CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcC-CcC
Confidence 358999999999999999863110 0111 257899995 553
No 110
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=88.09 E-value=0.12 Score=47.78 Aligned_cols=33 Identities=36% Similarity=0.920 Sum_probs=26.2
Q ss_pred ceeeeCCCCCcCCCccCCCCC--CC----CCCccCCccc
Q 002270 729 DLICCDGCPSTFHQSCLDIQM--LP----PGDWHCPNCT 761 (944)
Q Consensus 729 dLLcCD~Cp~aFH~~CL~p~~--vP----~g~W~Cp~C~ 761 (944)
.|+.|+.|..+||..|+++.. ++ ...|.|+.|.
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~ 112 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCY 112 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC
T ss_pred ceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCc
Confidence 489999999999999999742 12 2349999885
No 111
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=87.63 E-value=0.17 Score=51.26 Aligned_cols=34 Identities=26% Similarity=0.688 Sum_probs=23.7
Q ss_pred ccccCCCCCCCCCCCCCCCcceecCccchhhhhcccccc
Q 002270 762 CKFCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQE 800 (944)
Q Consensus 762 C~iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p 800 (944)
|.+|++...++. ....|+.|+.|++|||..|...
T Consensus 5 CpiC~k~Y~~~~-----~~~~MIqCd~C~~W~H~~Cvgi 38 (183)
T 3lqh_A 5 CPLCDKCYDDDD-----YESKMMQCGKCDRWVHSKCENL 38 (183)
T ss_dssp CTTTCCBCTTCC-----TTCCEEECTTTCCEEEGGGSSC
T ss_pred CCCCcCccCCcc-----cCCCeEECCCCCcccchhcccc
Confidence 445565544321 1345899999999999999875
No 112
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=85.14 E-value=0.4 Score=48.62 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=29.7
Q ss_pred ccCCCCCCCCCCCCCCCcceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 764 FCGLAGEDDAEGDDTTTSALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 764 iCG~~~~ds~eed~~s~~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
.||..+.... .+++|..|.++||..|+.......+... ...-|.|..|..
T Consensus 9 YCG~~~~~~~--------~mLqC~~C~qWFH~~Cl~~~~~~~lp~~-~fY~F~C~~C~~ 58 (177)
T 3rsn_A 9 DEENGRQLGE--------VELQCGICTKWFTADTFGIDTSSCLPFM-TNYSFHCNVCHH 58 (177)
T ss_dssp --CTTCCTTS--------CEEECTTTCCEEEGGGGTCCCTTCCTTC-CSEEEECTTTST
T ss_pred EcCCCCCCCc--------eeEeeccccceecHHHhcccccCccccc-eeEEEEccccCC
Confidence 5677665432 5899999999999999985332111101 123344577775
No 113
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=81.54 E-value=2.7 Score=38.96 Aligned_cols=43 Identities=30% Similarity=0.497 Sum_probs=34.9
Q ss_pred HhcCeeeeeccCCC---CCcccceeeCCCCceeeehHHHHHHHHHH
Q 002270 404 VEAGWTIDYRPRKN---RDYLDAVYINPTGTAYWSIIKAYDALTKQ 446 (944)
Q Consensus 404 ~~agwtid~rpr~~---r~y~d~vy~~p~g~~~wsi~kay~~~~~~ 446 (944)
|-.||+-...+|.. --..|..||+|+|+-+=|-...-..|.++
T Consensus 24 lP~GW~re~~~R~~G~s~gk~DvYY~sP~GkkfRSk~ev~ryL~~~ 69 (97)
T 3c2i_A 24 LPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIMYFEKV 69 (97)
T ss_dssp SCTTCEEEEEECCSSTTTTCEEEEEECTTSCEECSHHHHHHHHHHH
T ss_pred CCCCCEEEEEEecCCCCCCcceEEEECCCCCEEECHHHHHHHHHHC
Confidence 66899999999986 34789999999999999977665555443
No 114
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=80.40 E-value=0.23 Score=56.48 Aligned_cols=38 Identities=18% Similarity=0.574 Sum_probs=26.4
Q ss_pred cceecCccchhhhhccccccccccccCCCCCccceeCccchh
Q 002270 781 SALLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQE 822 (944)
Q Consensus 781 ~~Ll~CdqCeR~YHv~CL~p~~~~pl~~~p~~~WFCs~~Cke 822 (944)
..|+.|+.|+.|||..|+.-..... .....|+|+ .|..
T Consensus 18 ~~MIqCD~C~~WfH~~CVgi~~~~~---~~~~~y~C~-~C~~ 55 (447)
T 3kv4_A 18 RFMIECDMCQDWFHGSCVGVEEEKA---ADIDLYHCP-NCEV 55 (447)
T ss_dssp SCEEECTTTCCEEEHHHHTCCHHHH---TTEEECCCH-HHHH
T ss_pred CCeEEcCCCCcccccccCCcCcccc---cCCCEEECC-CCcc
Confidence 3589999999999999987432111 123679996 6643
No 115
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=80.15 E-value=1.8 Score=37.89 Aligned_cols=52 Identities=21% Similarity=0.327 Sum_probs=38.6
Q ss_pred HhcCeeeeeccCCC---CCcccceeeCCCCceeeehHHHHHHHHHHhccccccCCCCCCCCCCC
Q 002270 404 VEAGWTIDYRPRKN---RDYLDAVYINPTGTAYWSIIKAYDALTKQLNDEEDEAKPSADGSPFT 464 (944)
Q Consensus 404 ~~agwtid~rpr~~---r~y~d~vy~~p~g~~~wsi~kay~~~~~~~~~~~~~~~~~~~~~~~~ 464 (944)
|-.||+-..++|.+ .--.|.+|++|+|+-+=|....-.-| ++ -+..+.|.|+
T Consensus 13 Lp~GW~R~~~~R~~g~s~~k~DvyY~sP~Gkr~RS~~ev~~YL----~~-----~l~~~~FdF~ 67 (72)
T 2ky8_A 13 LPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYL----GN-----AVDLSCFDFR 67 (72)
T ss_dssp SCTTCEEEEEECCSSTTTTCEEEEEECTTCCEEESHHHHHHHH----TT-----SSCCTTCBTT
T ss_pred CCCCCEEEEEEecCCCCCCceEEEEECCCCCEeEcHHHHHHHH----hc-----CCChhhcCCC
Confidence 45799999999993 36899999999999998876654444 33 1444556664
No 116
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=77.56 E-value=0.43 Score=43.71 Aligned_cols=18 Identities=22% Similarity=0.735 Sum_probs=16.3
Q ss_pred eecCccchhhhhcccccc
Q 002270 783 LLPCAMCEKKYHKLCMQE 800 (944)
Q Consensus 783 Ll~CdqCeR~YHv~CL~p 800 (944)
|+.|+.|+.|||..|..-
T Consensus 2 mi~c~~c~~w~H~~c~~~ 19 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENL 19 (140)
T ss_dssp CCCCSCCSSCHHHHHCCC
T ss_pred ccccccCCCccCCccccc
Confidence 789999999999999763
No 117
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.32 E-value=0.53 Score=41.45 Aligned_cols=47 Identities=30% Similarity=0.616 Sum_probs=28.1
Q ss_pred CCCCcccccCCC----Cceee---eCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 716 PNDDTCGICGDG----GDLIC---CDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 716 ~ndd~C~VCgdg----GdLLc---CD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
..++.|.||.+. +.|+. |.++...||..||.....-.+...||.|+-
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~ 66 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKY 66 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCC
Confidence 356789999753 23432 223348999999975322223356777763
No 118
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=74.09 E-value=1.2 Score=45.12 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=20.9
Q ss_pred cccccCCCCc----eeeeCCCCCcCCCccCCCC
Q 002270 720 TCGICGDGGD----LICCDGCPSTFHQSCLDIQ 748 (944)
Q Consensus 720 ~C~VCgdgGd----LLcCD~Cp~aFH~~CL~p~ 748 (944)
.|. |+.+++ +|.|..|.+.||..|+...
T Consensus 7 yCY-CG~~~~~~~~mLqC~~C~qWFH~~Cl~~~ 38 (177)
T 3rsn_A 7 SVD-EENGRQLGEVELQCGICTKWFTADTFGID 38 (177)
T ss_dssp -----CTTCCTTSCEEECTTTCCEEEGGGGTCC
T ss_pred EEE-cCCCCCCCceeEeeccccceecHHHhccc
Confidence 564 887765 9999999999999999743
No 119
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=73.69 E-value=3.1 Score=36.78 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=31.7
Q ss_pred HhcCeeeeeccCCCC---CcccceeeCCCCceeeehHHHHHHH
Q 002270 404 VEAGWTIDYRPRKNR---DYLDAVYINPTGTAYWSIIKAYDAL 443 (944)
Q Consensus 404 ~~agwtid~rpr~~r---~y~d~vy~~p~g~~~wsi~kay~~~ 443 (944)
|-.||+-..++|.+- --.|..||+|+|+.+=|....-.-|
T Consensus 11 LP~GW~Re~~~R~~g~s~gk~DvyY~sP~Gkk~RS~~ev~ryL 53 (75)
T 1d9n_A 11 LGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL 53 (75)
T ss_dssp TCSSCEEEECSSSSSCTTCCCCEEEECSSSCEECSTHHHHHHH
T ss_pred CCCCCEEEEEEecCCCCCCceEEEEECCCCCeeecHHHHHHHh
Confidence 457999999999874 4799999999999887765543333
No 120
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=71.07 E-value=0.37 Score=40.30 Aligned_cols=47 Identities=26% Similarity=0.521 Sum_probs=27.9
Q ss_pred CCCCCcccccCCCC--ce-eee--CCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 715 DPNDDTCGICGDGG--DL-ICC--DGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 715 d~ndd~C~VCgdgG--dL-LcC--D~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+...+.|.||.+.+ +| .-| .+.-+.||..||.......+.+.|+.|.
T Consensus 3 ~~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~ 54 (60)
T 1vyx_A 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICG 54 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTC
T ss_pred CCCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCC
Confidence 34567899997532 22 233 2333499999997533223456777664
No 121
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.53 E-value=1.7 Score=38.12 Aligned_cols=45 Identities=22% Similarity=0.566 Sum_probs=30.5
Q ss_pred CCCcccccCCCC-ceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
..+.|.||.+.- .-+-|..|...||..|+.........-.||.|.
T Consensus 14 ~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr 59 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCN 59 (74)
T ss_dssp SSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTC
T ss_pred CCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCc
Confidence 457899997532 345788999999999997432222224577765
No 122
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=65.07 E-value=3.5 Score=32.20 Aligned_cols=43 Identities=26% Similarity=0.677 Sum_probs=28.2
Q ss_pred CCCcccccCCC---C-ceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDG---G-DLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdg---G-dLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
++..|.||.+. + .......|...||..|+.... .....||.|+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~--~~~~~CP~Cr 50 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL--GSHSTCPLCR 50 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT--TTCCSCSSSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHH--HcCCcCcCCC
Confidence 45689999753 2 244445699999999996432 1234688775
No 123
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=64.46 E-value=6.8 Score=34.06 Aligned_cols=59 Identities=25% Similarity=0.363 Sum_probs=39.9
Q ss_pred HhcCeeeeeccCCC---CCcccceeeCCCCceeeehHHHHHHHHHHhccccccCCCCCCCCCCCCCc
Q 002270 404 VEAGWTIDYRPRKN---RDYLDAVYINPTGTAYWSIIKAYDALTKQLNDEEDEAKPSADGSPFTPLP 467 (944)
Q Consensus 404 ~~agwtid~rpr~~---r~y~d~vy~~p~g~~~wsi~kay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (944)
|-.||+-..+.|.. .--.|.+|++|+|+.+=|....-.-|.++=+ ..+..+.|.|+..+
T Consensus 6 lp~GW~R~~~~R~~G~s~gk~DvyY~sP~Gkk~RSk~ev~~yL~~~~~-----~~l~~~~FdF~~p~ 67 (69)
T 3vxv_A 6 VPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGE-----TFLKPEDFNFTVLP 67 (69)
T ss_dssp SCTTCEEEEEECCSSTTTTCEEEEEECTTSCEECSHHHHHHHHHHHCC-----CCCCGGGSCCCCCC
T ss_pred CCCCCEEEEEEeccCCCCCcceEEEEcCCCCEeeCHHHHHHHHHhCCC-----CCCCHHHcceeCCC
Confidence 34799999999972 2345999999999998887765555544311 12344567776543
No 124
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=63.60 E-value=2.7 Score=46.88 Aligned_cols=32 Identities=38% Similarity=0.893 Sum_probs=23.7
Q ss_pred CCCCcccccCC----CCc--eeeeC--CCCCcCCCccCCC
Q 002270 716 PNDDTCGICGD----GGD--LICCD--GCPSTFHQSCLDI 747 (944)
Q Consensus 716 ~ndd~C~VCgd----gGd--LLcCD--~Cp~aFH~~CL~p 747 (944)
.....|.||-. .|. -..|+ .|...||..|+..
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~k 345 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEE 345 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHH
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHH
Confidence 34567999963 244 34688 7999999999963
No 125
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=62.55 E-value=4.1 Score=39.67 Aligned_cols=57 Identities=25% Similarity=0.423 Sum_probs=39.8
Q ss_pred HhcCeeeeeccCCC---CCcccceeeCCCCceeeehHHHHHHHHHHhccccccCCCCCCCCCCCC
Q 002270 404 VEAGWTIDYRPRKN---RDYLDAVYINPTGTAYWSIIKAYDALTKQLNDEEDEAKPSADGSPFTP 465 (944)
Q Consensus 404 ~~agwtid~rpr~~---r~y~d~vy~~p~g~~~wsi~kay~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (944)
|-.||+-...+|.. .-..|..||+|+|+.+=|-.....-| +... +.......|.|+.
T Consensus 38 LP~GWkRe~~~RksG~Sagk~DVYY~SP~GKkfRSk~Ev~ryL----~~~~-~~~~~~e~FdF~~ 97 (133)
T 1ub1_A 38 LPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYF----EKVG-DTSLDPNDFDFTV 97 (133)
T ss_dssp BTTBCEEEEEECCCSSSCCSEEEEEECTTSCEESSHHHHHHHH----TTSC-CCSCCGGGCCCCC
T ss_pred CCCCCEEEEEEecCCCCCCceeEEEECCCCCeeeCHHHHHHHH----HHCC-ccCCCHhHCcccc
Confidence 66899999999986 46799999999999998876544444 3222 1123334577763
No 126
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.71 E-value=1.9 Score=36.12 Aligned_cols=44 Identities=25% Similarity=0.620 Sum_probs=28.5
Q ss_pred CCCCcccccCC---CCceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 716 PNDDTCGICGD---GGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgd---gGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
..+..|.||.+ .++.+..-.|...||..|+..... ....||.|+
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~--~~~~CP~Cr 67 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK--ANRTCPICR 67 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHH--HCSSCTTTC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHH--cCCcCcCcC
Confidence 45678999984 344444556999999999964210 113577765
No 127
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=59.70 E-value=5.6 Score=33.35 Aligned_cols=45 Identities=24% Similarity=0.536 Sum_probs=28.1
Q ss_pred CCCCcccccCCC---CceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 716 PNDDTCGICGDG---GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 716 ~ndd~C~VCgdg---GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
..+..|.||.+. .+.+.--.|...||..|+..... ....||.|+-
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~--~~~~CP~Cr~ 60 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLE--QHDSCPVCRK 60 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHT--TTCSCTTTCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHH--cCCcCcCcCC
Confidence 456789999653 23333335899999999964211 1246777764
No 128
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=59.02 E-value=0.28 Score=44.70 Aligned_cols=43 Identities=35% Similarity=0.783 Sum_probs=28.3
Q ss_pred CCCcccccCCC-------CceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDG-------GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdg-------GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
++..|.||.+. ++.+.--.|+..||..|+..... ..-.||.|+
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr 55 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCR 55 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT--TCSBCTTTC
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH--hCCCCCCCC
Confidence 45689999752 34445568999999999964211 112688776
No 129
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=57.60 E-value=0.69 Score=51.87 Aligned_cols=39 Identities=23% Similarity=0.509 Sum_probs=24.9
Q ss_pred ceecCc--cchhhhhccccccccc--cccCCCCCccceeCccch
Q 002270 782 ALLPCA--MCEKKYHKLCMQEMDA--LSDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~Cd--qCeR~YHv~CL~p~~~--~pl~~~p~~~WFCs~~Ck 821 (944)
.++.|+ .|.+.|+..|+..... ..........|.|- .|.
T Consensus 104 ~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf-~C~ 146 (386)
T 2pv0_B 104 TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCY-LCL 146 (386)
T ss_dssp SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCT-TTS
T ss_pred eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEE-EcC
Confidence 489999 9999999999874211 00111234778874 554
No 130
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=56.78 E-value=2 Score=35.31 Aligned_cols=46 Identities=28% Similarity=0.686 Sum_probs=28.9
Q ss_pred CCCCCcccccCC---CCceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 715 DPNDDTCGICGD---GGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 715 d~ndd~C~VCgd---gGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
...+..|.||.+ .++.+..-.|...||..|+..... ....||.|+-
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~--~~~~CP~Cr~ 59 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLI--TNKKCPICRV 59 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCS
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHH--cCCCCcCcCc
Confidence 345678999964 334444556999999999964210 0124777763
No 131
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.72 E-value=3.4 Score=35.62 Aligned_cols=28 Identities=25% Similarity=0.737 Sum_probs=18.0
Q ss_pred eeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 732 CCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 732 cCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
.-..|...||..|+..-..-. -.||.|+
T Consensus 44 ~~~~C~H~FH~~Ci~~Wl~~~--~~CP~CR 71 (81)
T 2ecl_A 44 VWGECNHSFHNCCMSLWVKQN--NRCPLCQ 71 (81)
T ss_dssp EEETTSCEEEHHHHHHHTTTC--CBCTTTC
T ss_pred EeCCCCCccChHHHHHHHHhC--CCCCCcC
Confidence 334699999999997422111 2577775
No 132
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=53.66 E-value=0.98 Score=45.13 Aligned_cols=39 Identities=15% Similarity=0.307 Sum_probs=25.8
Q ss_pred ceecCc--cchhhhhcccccccccc--ccCCCCCccceeCccch
Q 002270 782 ALLPCA--MCEKKYHKLCMQEMDAL--SDNLTGLVTSFCGRKCQ 821 (944)
Q Consensus 782 ~Ll~Cd--qCeR~YHv~CL~p~~~~--pl~~~p~~~WFCs~~Ck 821 (944)
.++.|+ .|.+.|...|+.-.... ........+|.| =.|.
T Consensus 90 ~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~C-y~C~ 132 (159)
T 3a1b_A 90 EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNC-YMCG 132 (159)
T ss_dssp EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCC-TTTC
T ss_pred eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEE-EecC
Confidence 589999 79999999998742111 111234578988 3553
No 133
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=53.20 E-value=2.9 Score=32.63 Aligned_cols=43 Identities=21% Similarity=0.607 Sum_probs=28.6
Q ss_pred CCCcccccCCC----CceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDG----GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdg----GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
.+..|.||.+. ++....-.|...||..|+...... ...||.|+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~--~~~CP~Cr 50 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE--GYRCPLCS 50 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH--TCCCTTSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc--CCcCCCCC
Confidence 45689999753 234666679999999999632110 14588775
No 134
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=52.44 E-value=2.6 Score=38.03 Aligned_cols=32 Identities=28% Similarity=0.687 Sum_probs=20.7
Q ss_pred eCCCCCcCCCccCCCCC---CCCCCccCCcccccc
Q 002270 733 CDGCPSTFHQSCLDIQM---LPPGDWHCPNCTCKF 764 (944)
Q Consensus 733 CD~Cp~aFH~~CL~p~~---vP~g~W~Cp~C~C~i 764 (944)
.-.|...||..|+.... .....-.||.|+-.+
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCcc
Confidence 45689999999997421 113345688777443
No 135
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=50.61 E-value=18 Score=28.97 Aligned_cols=40 Identities=23% Similarity=0.465 Sum_probs=24.5
Q ss_pred CCCcccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
.+..|.+|.+.-.-..--.|...|+..|+.. ....||.|+
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~-----~~~~CP~Cr 44 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA-----SGMQCPICQ 44 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS-----SSSSCSSCC
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHcc-----CCCCCCcCC
Confidence 4567999986432111224788888888754 234577765
No 136
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=49.93 E-value=3.3 Score=36.40 Aligned_cols=44 Identities=30% Similarity=0.660 Sum_probs=28.0
Q ss_pred CCCCcccccCC---CCceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 716 PNDDTCGICGD---GGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgd---gGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
..+..|.||.+ .++.+..-.|...||..|+..... ..-.||.|+
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~--~~~~CP~Cr 84 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQ--KSGTCPVCR 84 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHT--TTCBCTTTC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHH--cCCcCcCcC
Confidence 35678999974 234343345999999999974221 123677775
No 137
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=48.92 E-value=5.2 Score=41.78 Aligned_cols=45 Identities=22% Similarity=0.544 Sum_probs=31.2
Q ss_pred CCcccccCCC-CceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 718 DDTCGICGDG-GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 718 dd~C~VCgdg-GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
...|.+|.+- -.-..|..|+..||..|+.--......-.||.|..
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 5689999862 23478989999999999964322233446877653
No 138
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=48.05 E-value=4.9 Score=33.78 Aligned_cols=46 Identities=26% Similarity=0.709 Sum_probs=28.3
Q ss_pred CCCCcccccCCCC-ceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 716 PNDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
..+..|.||.+.- +-+.-..|...||..|+.......+...||.|+
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr 59 (74)
T 2yur_A 13 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH 59 (74)
T ss_dssp CGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSC
T ss_pred CCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCC
Confidence 4566899998643 333334489999999986422111234577765
No 139
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=45.33 E-value=4.2 Score=37.52 Aligned_cols=26 Identities=23% Similarity=0.459 Sum_probs=17.6
Q ss_pred CCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 734 DGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 734 D~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
-.|...||..|+..... ..-.||.|+
T Consensus 71 ~~C~H~FH~~Ci~~Wl~--~~~~CP~Cr 96 (106)
T 3dpl_R 71 GVCNHAFHFHCISRWLK--TRQVCPLDN 96 (106)
T ss_dssp ETTSCEEEHHHHHHHHT--TCSBCSSSC
T ss_pred cccCcEECHHHHHHHHH--cCCcCcCCC
Confidence 46999999999975211 123577775
No 140
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=44.47 E-value=5.5 Score=37.61 Aligned_cols=25 Identities=24% Similarity=0.491 Sum_probs=0.0
Q ss_pred CCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 735 GCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 735 ~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
.|...||..|+.....- .-.||.|+
T Consensus 83 ~C~H~FH~~CI~~Wl~~--~~~CP~Cr 107 (117)
T 4a0k_B 83 VCNHAFHFHCISRWLKT--RQVCPLDN 107 (117)
T ss_dssp ---------------------------
T ss_pred CcCceEcHHHHHHHHHc--CCcCCCCC
Confidence 68899999999753211 23477665
No 141
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.50 E-value=13 Score=30.46 Aligned_cols=45 Identities=24% Similarity=0.493 Sum_probs=28.8
Q ss_pred CCCCcccccCCCC-ceeeeCCCCCcCCCccCCCCCC-CCCCccCCccc
Q 002270 716 PNDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQML-PPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~~v-P~g~W~Cp~C~ 761 (944)
..+..|.||.+.- +.+.. .|...||..|+..... ......||.|+
T Consensus 18 ~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr 64 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCK 64 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHHHCSSSCSCCCCSSSC
T ss_pred ccCCEeccCCcccCCeEEc-CCCChhhHHHHHHHHHcCCCCCCCCCCC
Confidence 4567899998643 32222 7999999999864221 12345687775
No 142
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.66 E-value=8.6 Score=31.85 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=27.5
Q ss_pred CCCCcccccCCCC-ceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 716 PNDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 716 ~ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
..+..|.||.+.- +.+.. .|...||..|+..... ....||.|+-
T Consensus 13 ~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~--~~~~CP~Cr~ 57 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSL-PCKHVFCYLCVKGASW--LGKRCALCRQ 57 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEE-TTTEEEEHHHHHHCTT--CSSBCSSSCC
T ss_pred CCCCCCccCCcccCCCEEc-cCCCHHHHHHHHHHHH--CCCcCcCcCc
Confidence 4557899998643 32222 5998999999863211 1246777763
No 143
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.56 E-value=14 Score=28.94 Aligned_cols=45 Identities=20% Similarity=0.468 Sum_probs=26.8
Q ss_pred CCCCcccccCCCCceeeeCCCCCcCCCccCCCCCC-CCCCccCCcc
Q 002270 716 PNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQML-PPGDWHCPNC 760 (944)
Q Consensus 716 ~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~v-P~g~W~Cp~C 760 (944)
..+..|.||.+.-.-..--.|...||..|+..... ......||.|
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 34568999986322111125888899999864311 1245667766
No 144
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.29 E-value=7.2 Score=31.99 Aligned_cols=44 Identities=30% Similarity=0.650 Sum_probs=28.4
Q ss_pred CCCCcccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 716 PNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 716 ~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
..+..|.||.+.-.- .--.|...||..|+.... .....||.|+-
T Consensus 13 ~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~ 56 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-LILPCAHSFCQKCIDKWS--DRHRNCPICRL 56 (70)
T ss_dssp CCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSS--CCCSSCHHHHH
T ss_pred CCCCCCeeCCcCccC-cccCCCCcccHHHHHHHH--HCcCcCCCcCC
Confidence 346789999864332 334688889999986421 13456777653
No 145
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=38.59 E-value=17 Score=30.19 Aligned_cols=45 Identities=22% Similarity=0.548 Sum_probs=26.6
Q ss_pred CCCCcccccCCCC-ceeeeCCCCCcCCCccCCCCCCC-----CCCccCCccc
Q 002270 716 PNDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQMLP-----PGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~~vP-----~g~W~Cp~C~ 761 (944)
..+..|.+|.+.- +.+. -.|...||..|+...... .....||.|+
T Consensus 10 ~~~~~C~IC~~~~~~p~~-l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr 60 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLS-LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60 (79)
T ss_dssp CCCCEETTTTEECSSCCC-CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSC
T ss_pred ccCCCCcCCCcccCCeeE-CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCC
Confidence 3456899997532 2111 258888998898642111 2345677665
No 146
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=36.78 E-value=7.3 Score=31.70 Aligned_cols=44 Identities=20% Similarity=0.483 Sum_probs=28.3
Q ss_pred CCCcccccCCCC-ceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 717 NDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 717 ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
.+..|.+|.+.- +....-.|...||..|+.... .....||.|+-
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~ 48 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWI--RQNPTCPLCKV 48 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHH--HHSCSTTTTCC
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHH--hCcCcCcCCCh
Confidence 356899998754 323455799999999996321 11235777763
No 147
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.63 E-value=4.6 Score=33.55 Aligned_cols=45 Identities=24% Similarity=0.516 Sum_probs=27.1
Q ss_pred CCCCcccccCCC---CceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 716 PNDDTCGICGDG---GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 716 ~ndd~C~VCgdg---GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
..+..|.||.+. +..+.--.|...||..|+..... ....||.|+-
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~--~~~~CP~Cr~ 60 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE--VRKVCPLCNM 60 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHH--HCSBCTTTCC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHH--cCCcCCCcCc
Confidence 346789999753 22222225899999999964210 0125777764
No 148
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=36.32 E-value=19 Score=27.03 Aligned_cols=11 Identities=36% Similarity=1.380 Sum_probs=8.7
Q ss_pred CCCCccCCccc
Q 002270 751 PPGDWHCPNCT 761 (944)
Q Consensus 751 P~g~W~Cp~C~ 761 (944)
..++|.|+.|.
T Consensus 3 ~~gDW~C~~C~ 13 (33)
T 2k1p_A 3 SANDWQCKTCS 13 (33)
T ss_dssp SSSSCBCSSSC
T ss_pred CCCCcccCCCC
Confidence 46899999774
No 149
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=36.07 E-value=12 Score=27.86 Aligned_cols=10 Identities=40% Similarity=1.159 Sum_probs=8.2
Q ss_pred CCCccCCccc
Q 002270 752 PGDWHCPNCT 761 (944)
Q Consensus 752 ~g~W~Cp~C~ 761 (944)
.|+|.|+.|.
T Consensus 3 ~gDW~C~~C~ 12 (32)
T 2lk0_A 3 FEDWLCNKCC 12 (32)
T ss_dssp CSEEECTTTC
T ss_pred CCCCCcCcCc
Confidence 4899999875
No 150
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=35.92 E-value=23 Score=29.46 Aligned_cols=45 Identities=24% Similarity=0.638 Sum_probs=28.1
Q ss_pred CCCCcccccCCCC-ceeeeCCCCCcCCCccCCCC----CCCCCCccCCccc
Q 002270 716 PNDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQ----MLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~----~vP~g~W~Cp~C~ 761 (944)
..+..|.||.+.- +-+. -.|...||..|+... ....+...||.|+
T Consensus 17 ~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr 66 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCR 66 (85)
T ss_dssp CTTTSCTTTCSCCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTC
T ss_pred ccCCCCcCCChhhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 3556899998643 2222 258888999998631 1122356788775
No 151
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=35.30 E-value=12 Score=43.73 Aligned_cols=75 Identities=21% Similarity=0.480 Sum_probs=22.6
Q ss_pred CcccccCCC-----CceeeeCCCCCcCCCccCCC-CCC------------C--CCCcc----CCcccccccCCCCCCCCC
Q 002270 719 DTCGICGDG-----GDLICCDGCPSTFHQSCLDI-QML------------P--PGDWH----CPNCTCKFCGLAGEDDAE 774 (944)
Q Consensus 719 d~C~VCgdg-----GdLLcCD~Cp~aFH~~CL~p-~~v------------P--~g~W~----Cp~C~C~iCG~~~~ds~e 774 (944)
.+|.+|++- -+-+.|..|.-..|..|... +.. + ...|. ..--.|..|+..-..-
T Consensus 49 ~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~g~-- 126 (674)
T 3pfq_A 49 TFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGL-- 126 (674)
T ss_dssp -----------------------------------------------------CCCCCEECCSSCCCCSSSCSCCBBS--
T ss_pred CccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccchh--
Confidence 589999752 36788999999999999863 100 0 01232 1111255665442100
Q ss_pred CCCCCCcceecCccchhhhhcccccc
Q 002270 775 GDDTTTSALLPCAMCEKKYHKLCMQE 800 (944)
Q Consensus 775 ed~~s~~~Ll~CdqCeR~YHv~CL~p 800 (944)
...-+.|..|..-+|..|...
T Consensus 127 -----~~qg~~C~~C~~~~H~~C~~~ 147 (674)
T 3pfq_A 127 -----IHQGMKCDTCMMNVHKRCVMN 147 (674)
T ss_dssp -----SSCEECCSSSCCCBCSSTTSS
T ss_pred -----hcCccccccCCcchhhhhhhc
Confidence 013489999999999999764
No 152
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=33.85 E-value=13 Score=33.48 Aligned_cols=22 Identities=36% Similarity=0.946 Sum_probs=13.6
Q ss_pred CcccccCC----CCceeeeCCCCCcC
Q 002270 719 DTCGICGD----GGDLICCDGCPSTF 740 (944)
Q Consensus 719 d~C~VCgd----gGdLLcCD~Cp~aF 740 (944)
..|..|.. .+....|..|.+-|
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~ 28 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDF 28 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEE
T ss_pred CCCCCCCCccccCCCceECccccccC
Confidence 46777764 23455688887643
No 153
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=33.73 E-value=23 Score=32.10 Aligned_cols=32 Identities=31% Similarity=0.835 Sum_probs=26.2
Q ss_pred ceeeeCCCCC-cCCCccCCCCCCCCCCccCCccc
Q 002270 729 DLICCDGCPS-TFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 729 dLLcCD~Cp~-aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+|+.|..|.. .-|..|..+. .....|.|..|.
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~l~-~~~~~weC~~C~ 77 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSSLR-PNSKKWECNECL 77 (85)
T ss_dssp BCEECSSSCCCEECSGGGTCC-TTCSCCCCTTTS
T ss_pred EEEeCcccCCchhHHHHhCCc-CCCCCEECCcCc
Confidence 4999999996 8999999864 245679999886
No 154
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.99 E-value=15 Score=29.47 Aligned_cols=44 Identities=25% Similarity=0.503 Sum_probs=27.1
Q ss_pred CCCCcccccCCCC-ceeeeCCCCCcCCCccCCCCCC-CCCCccCCcc
Q 002270 716 PNDDTCGICGDGG-DLICCDGCPSTFHQSCLDIQML-PPGDWHCPNC 760 (944)
Q Consensus 716 ~ndd~C~VCgdgG-dLLcCD~Cp~aFH~~CL~p~~v-P~g~W~Cp~C 760 (944)
..+..|.||.+.- +.+.- .|...||..|+..... ......||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC-TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe-CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 4567899998643 22222 7999999999863211 1234567766
No 155
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.76 E-value=14 Score=30.78 Aligned_cols=45 Identities=31% Similarity=0.635 Sum_probs=27.4
Q ss_pred CCCCcccccCCCCc-eeeeCCCCCcCCCccCCCCC----CCCCCccCCccc
Q 002270 716 PNDDTCGICGDGGD-LICCDGCPSTFHQSCLDIQM----LPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgGd-LLcCD~Cp~aFH~~CL~p~~----vP~g~W~Cp~C~ 761 (944)
..+..|.+|.+.-. .+. -.|...||..|+.... ...+...||.|+
T Consensus 17 ~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr 66 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLS-LDCGHSFCQACLTANHKKSMLDKGESSCPVCR 66 (85)
T ss_dssp CCCCCCTTTCSCCSSCBC-CSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTC
T ss_pred cCCCCCCCCCcccCCcee-CCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCC
Confidence 34568999986432 121 2688889888886311 123345677765
No 156
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=31.83 E-value=9.1 Score=36.84 Aligned_cols=44 Identities=25% Similarity=0.639 Sum_probs=27.7
Q ss_pred CCCcccccCCC-CceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDG-GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdg-GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
.+..|.||.+. .+-+.+..|...||..|+..... .+...||.|+
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr 97 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALR-SGNKECPTCR 97 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH-TTCCBCTTTC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH-hCcCCCCCCC
Confidence 34579999864 34555568999999999863211 1234566665
No 157
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=30.71 E-value=20 Score=32.25 Aligned_cols=44 Identities=23% Similarity=0.492 Sum_probs=25.0
Q ss_pred CCCcccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
.+..|.||.+.-.-..--.|...||..|+.... ..+...||.|+
T Consensus 14 ~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr 57 (115)
T 3l11_A 14 SECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCR 57 (115)
T ss_dssp HHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTC
T ss_pred CCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCC
Confidence 345799998542211112688888888885321 22335566664
No 158
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.13 E-value=10 Score=32.15 Aligned_cols=45 Identities=20% Similarity=0.313 Sum_probs=26.0
Q ss_pred CCCCCcccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 715 DPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 715 d~ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
......|.||.+.-.-..--.|...||..|+.... .....||.|+
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr 56 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHF--RATPRCYICD 56 (81)
T ss_dssp CCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHH--HHCSBCSSSC
T ss_pred CCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHH--HCCCcCCCcC
Confidence 33456899998643211224688888888885321 0123466665
No 159
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=29.88 E-value=15 Score=32.95 Aligned_cols=29 Identities=34% Similarity=0.788 Sum_probs=23.7
Q ss_pred CCcccccCC--CCceeeeCC--CCCcCCCccCC
Q 002270 718 DDTCGICGD--GGDLICCDG--CPSTFHQSCLD 746 (944)
Q Consensus 718 dd~C~VCgd--gGdLLcCD~--Cp~aFH~~CL~ 746 (944)
...|.+|.. .|--+-|.. |..+||..|.-
T Consensus 17 ~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 17 KLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHH
T ss_pred cCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHH
Confidence 457999985 377888875 99999999974
No 160
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.70 E-value=5.1 Score=32.39 Aligned_cols=44 Identities=34% Similarity=0.768 Sum_probs=28.6
Q ss_pred CCCCcccccCCC-------CceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 716 PNDDTCGICGDG-------GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdg-------GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
..+..|.||.+. ++.+.--.|...||..|+..... ....||.|+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr 63 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCR 63 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHH--HCSSCTTTC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHH--cCCCCCCCC
Confidence 456789999753 34445667999999999963210 022577765
No 161
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.47 E-value=9.7 Score=32.27 Aligned_cols=46 Identities=22% Similarity=0.377 Sum_probs=27.6
Q ss_pred CCCCcccccCCCCce----eeeCCCCCcCCCccCCCCC-CCCCCccCCccc
Q 002270 716 PNDDTCGICGDGGDL----ICCDGCPSTFHQSCLDIQM-LPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgGdL----LcCD~Cp~aFH~~CL~p~~-vP~g~W~Cp~C~ 761 (944)
.....|.||.+.-.. ..--.|...||..|+.... .......||.|+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr 63 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCS 63 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCC
Confidence 345689999753211 2223689999999986321 111345677776
No 162
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=29.47 E-value=7.9 Score=34.49 Aligned_cols=44 Identities=25% Similarity=0.507 Sum_probs=29.0
Q ss_pred CCcccccCCC-CceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 718 DDTCGICGDG-GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 718 dd~C~VCgdg-GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
+..|.||.+. .+.+.|-.|...||..|+...... ....||.|+.
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~-~~~~CP~Cr~ 66 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTE-QRAQCPHCRA 66 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHH-TCSBCTTTCC
T ss_pred CCCCccCCccccCccccCCCCChhhHHHHHHHHHH-CcCCCCCCCC
Confidence 4579999864 456667889999999999632100 1145776653
No 163
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.08 E-value=12 Score=30.49 Aligned_cols=44 Identities=18% Similarity=0.336 Sum_probs=26.1
Q ss_pred CCCcccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 717 NDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 717 ndd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
.+..|.+|.+.-.-..--.|...||..|+..... .....||.|+
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr 57 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQTECGHRFCESCMAALLS-SSSPKCTACQ 57 (66)
T ss_dssp CCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHT-TSSCCCTTTC
T ss_pred cCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHH-hCcCCCCCCC
Confidence 4567999986322111136888999999863211 2334577665
No 164
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=29.04 E-value=9.7 Score=31.06 Aligned_cols=44 Identities=34% Similarity=0.744 Sum_probs=29.0
Q ss_pred CCCcccccCCC-------CceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 717 NDDTCGICGDG-------GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 717 ndd~C~VCgdg-------GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
.+..|.||.+. ++.+..-.|...||..|+..... ..-.||.|+-
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~ 59 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRK 59 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--cCCCCCCCCC
Confidence 45789999753 44556678999999999963210 1125776653
No 165
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=28.77 E-value=32 Score=30.05 Aligned_cols=20 Identities=30% Similarity=0.853 Sum_probs=12.8
Q ss_pred CCCCcccccCCCCceeeeCCC
Q 002270 716 PNDDTCGICGDGGDLICCDGC 736 (944)
Q Consensus 716 ~ndd~C~VCgdgGdLLcCD~C 736 (944)
+...+|.||.+... |-|.+|
T Consensus 6 ee~pWC~ICneDAt-lrC~gC 25 (67)
T 2d8v_A 6 SGLPWCCICNEDAT-LRCAGC 25 (67)
T ss_dssp CCCSSCTTTCSCCC-EEETTT
T ss_pred cCCCeeEEeCCCCe-EEecCC
Confidence 45678889987644 445555
No 166
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=28.18 E-value=14 Score=30.85 Aligned_cols=44 Identities=18% Similarity=0.286 Sum_probs=26.5
Q ss_pred CCCCcccccCCCCc-eeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 716 PNDDTCGICGDGGD-LICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdgGd-LLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+.+-.|.+|.+.-. -+. -.|+..|+..|+.... ..+...||.|.
T Consensus 6 ~~~~~C~IC~~~~~~Pv~-~~CgH~fc~~Ci~~~~-~~~~~~CP~C~ 50 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVI-VSTGQTYERSSIQKWL-DAGHKTCPKSQ 50 (78)
T ss_dssp SSSSSCTTTSCCCSSEEE-ETTTEEEEHHHHHHHH-TTTCCBCTTTC
T ss_pred cccCCCCCccccccCCEE-cCCCCeecHHHHHHHH-HHCcCCCCCCc
Confidence 45678999987432 222 2588888888885321 12345566654
No 167
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=28.01 E-value=28 Score=37.86 Aligned_cols=28 Identities=25% Similarity=0.719 Sum_probs=19.5
Q ss_pred CCCCcccccCCC-------------C-ceeeeCCCCCcCCCc
Q 002270 716 PNDDTCGICGDG-------------G-DLICCDGCPSTFHQS 743 (944)
Q Consensus 716 ~ndd~C~VCgdg-------------G-dLLcCD~Cp~aFH~~ 743 (944)
.+...|.+||.. | ..+.|..|...+|..
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~ 221 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYV 221 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECC
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeec
Confidence 456799999741 2 278888888777643
No 168
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=26.86 E-value=19 Score=31.87 Aligned_cols=44 Identities=23% Similarity=0.406 Sum_probs=24.5
Q ss_pred CCcccccCCCCceeeeCCCCCcCCCccCCCCC-CCCCCccCCccc
Q 002270 718 DDTCGICGDGGDLICCDGCPSTFHQSCLDIQM-LPPGDWHCPNCT 761 (944)
Q Consensus 718 dd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~-vP~g~W~Cp~C~ 761 (944)
...|.+|.+.-.-..--.|...||..|+.... ...+...||.|+
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr 65 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCK 65 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTS
T ss_pred CCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCC
Confidence 35799997642211112688888888885321 112335576664
No 169
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=26.56 E-value=9.8 Score=32.86 Aligned_cols=46 Identities=26% Similarity=0.726 Sum_probs=25.5
Q ss_pred CCCCcccccCCC-CceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 716 PNDDTCGICGDG-GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 716 ~ndd~C~VCgdg-GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
..+-.|.+|.+. .+-+.-..|+.+|+..|+.......+...||.|+
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr 57 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH 57 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTC
T ss_pred CcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCC
Confidence 355689999853 2223333488888888875321111234566654
No 170
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=23.52 E-value=17 Score=34.04 Aligned_cols=28 Identities=21% Similarity=0.509 Sum_probs=19.1
Q ss_pred CCcccccCCCCc-eeeeCCCCCcCCCccCC
Q 002270 718 DDTCGICGDGGD-LICCDGCPSTFHQSCLD 746 (944)
Q Consensus 718 dd~C~VCgdgGd-LLcCD~Cp~aFH~~CL~ 746 (944)
+..|.||.+.-. .+. -.|+..||..|+.
T Consensus 53 ~~~C~iC~~~~~~~~~-~~CgH~fc~~Ci~ 81 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVT-LNCAHSFCSYCIN 81 (138)
T ss_dssp HSBCTTTCSBCSSEEE-ETTSCEEEHHHHH
T ss_pred cCCCcccCcccCCceE-CCCCCCccHHHHH
Confidence 357999986432 222 2588889888885
No 171
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=23.10 E-value=11 Score=29.95 Aligned_cols=42 Identities=36% Similarity=0.774 Sum_probs=26.8
Q ss_pred CCcccccCCC-------CceeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 718 DDTCGICGDG-------GDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 718 dd~C~VCgdg-------GdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+..|.+|.+. ++.+....|...||..|+..... ....||.|+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr 51 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCR 51 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHH--HCSBCTTTC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHH--cCCCCCCCC
Confidence 4579999753 33445568999999999963110 123577665
No 172
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=23.03 E-value=14 Score=33.85 Aligned_cols=44 Identities=20% Similarity=0.394 Sum_probs=26.0
Q ss_pred CCcccccCCCCceeeeCCCCCcCCCccCCCCCCCCCCccCCcccc
Q 002270 718 DDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTC 762 (944)
Q Consensus 718 dd~C~VCgdgGdLLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~C 762 (944)
+..|.||.+.-.-..--.|+..||..|+..... .....||.|+-
T Consensus 52 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~ 95 (124)
T 3fl2_A 52 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFR-AQVFSCPACRY 95 (124)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCC
T ss_pred CCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh-HCcCCCCCCCc
Confidence 457999986432111227888899889853211 22345776653
No 173
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=22.37 E-value=28 Score=31.16 Aligned_cols=38 Identities=34% Similarity=0.914 Sum_probs=25.7
Q ss_pred CCCCCccCCcccccccCCCCCCCCCCCCCCCcceecCcc--chhhhhcccccc
Q 002270 750 LPPGDWHCPNCTCKFCGLAGEDDAEGDDTTTSALLPCAM--CEKKYHKLCMQE 800 (944)
Q Consensus 750 vP~g~W~Cp~C~C~iCG~~~~ds~eed~~s~~~Ll~Cdq--CeR~YHv~CL~p 800 (944)
+|...|.= .|.+|.... .+.-+.|.. |...||+.|...
T Consensus 11 Ip~~R~~l---~C~iC~~~~----------~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 11 IPPARWKL---TCYLCKQKG----------VGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCCCCCC---CBTTTTBCC----------SSCEEECSCTTTCCEEEHHHHHH
T ss_pred CChHHhcC---CCcCCCCCC----------CcEeEecCCCCCCCcCcHHHHHH
Confidence 67777742 366775432 123588975 999999999664
No 174
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=21.94 E-value=21 Score=31.89 Aligned_cols=30 Identities=23% Similarity=0.478 Sum_probs=21.7
Q ss_pred CCCcccccCCC-CceeeeCCCCCcCCCccCC
Q 002270 717 NDDTCGICGDG-GDLICCDGCPSTFHQSCLD 746 (944)
Q Consensus 717 ndd~C~VCgdg-GdLLcCD~Cp~aFH~~CL~ 746 (944)
.+..|.+|.+. .+-+....|+..||..|+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~ 44 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIV 44 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHH
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHH
Confidence 35689999864 3444445788889888885
No 175
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=21.19 E-value=63 Score=29.26 Aligned_cols=40 Identities=25% Similarity=0.555 Sum_probs=23.4
Q ss_pred CCcccccCCCCc-eeeeCCCCCcCCCccCCCCCCCCCCccCCccc
Q 002270 718 DDTCGICGDGGD-LICCDGCPSTFHQSCLDIQMLPPGDWHCPNCT 761 (944)
Q Consensus 718 dd~C~VCgdgGd-LLcCD~Cp~aFH~~CL~p~~vP~g~W~Cp~C~ 761 (944)
+..|.||.+.-. -+.-..|+..|+..|+.-... ..||.|+
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~----~~CP~Cr 62 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG----TGCPVCY 62 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT----TBCSSSC
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc----CCCcCCC
Confidence 457999986432 222225788888888853211 3466654
Done!