Your job contains 1 sequence.
>002271
MQEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLR
LEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQAR
DGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEETNGDVSAAEAVAPLNSAQ
RLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETA
KDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIH
DQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYARE
AREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAGEE
SVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVINH
RDFEERSNYYDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSR
RIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVE
IEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQ
KLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLAS
LNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQ
ELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRA
LVEERDSSGGKLKGQGTGTLLHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAA
LENLEKFQEEAKTARIGMWQYGDIQSDDEDPLPSAVRKVAGGRR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002271
(944 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159218 - symbol:Tudor2 "TUDOR-SN protein 2" s... 1704 2.3e-313 2
ZFIN|ZDB-GENE-030131-3124 - symbol:snd1 "staphylococcal n... 669 4.5e-113 3
RGD|631340 - symbol:Snd1 "staphylococcal nuclease and tud... 661 2.2e-111 3
UNIPROTKB|Q66X93 - symbol:Snd1 "Staphylococcal nuclease d... 661 2.2e-111 3
MGI|MGI:1929266 - symbol:Snd1 "staphylococcal nuclease an... 656 2.8e-111 3
UNIPROTKB|Q7KZF4 - symbol:SND1 "Staphylococcal nuclease d... 657 4.5e-111 3
UNIPROTKB|Q863B3 - symbol:SND1 "Staphylococcal nuclease d... 653 7.3e-111 3
UNIPROTKB|E2RH91 - symbol:SND1 "Uncharacterized protein" ... 654 9.2e-111 3
FB|FBgn0035121 - symbol:Tudor-SN "Tudor-SN" species:7227 ... 467 2.0e-79 3
ASPGD|ASPL0000052132 - symbol:AN0242 species:162425 "Emer... 572 1.5e-78 3
DICTYBASE|DDB_G0279659 - symbol:snd1 "Staphylococcus nucl... 441 1.6e-77 4
UNIPROTKB|G5EHM8 - symbol:MGCH7_ch7g348 "Nuclease domain-... 546 9.7e-74 3
WB|WBGene00006626 - symbol:tsn-1 species:6239 "Caenorhabd... 345 4.2e-66 3
POMBASE|SPCC645.08c - symbol:snd1 "RNA-binding protein Sn... 465 3.0e-65 3
UNIPROTKB|F1SML4 - symbol:SND1 "Uncharacterized protein" ... 307 5.3e-62 3
UNIPROTKB|H7C597 - symbol:SND1 "Staphylococcal nuclease d... 259 2.1e-28 2
UNIPROTKB|B7WPM2 - symbol:TDRD1 "Tudor domain-containing ... 195 2.3e-11 1
UNIPROTKB|H9KV62 - symbol:TDRD1 "Tudor domain-containing ... 195 2.4e-11 1
UNIPROTKB|H9KV63 - symbol:TDRD1 "Tudor domain-containing ... 195 2.4e-11 1
UNIPROTKB|Q9BXT4 - symbol:TDRD1 "Tudor domain-containing ... 195 2.6e-11 1
RGD|1306140 - symbol:Tdrd1 "tudor domain containing 1" sp... 193 4.3e-11 1
MGI|MGI:1933218 - symbol:Tdrd1 "tudor domain containing 1... 183 5.1e-10 1
UNIPROTKB|F1MZE7 - symbol:TDRD1 "Uncharacterized protein"... 182 6.6e-10 1
UNIPROTKB|I3LGS1 - symbol:TDRD1 "Uncharacterized protein"... 175 2.6e-09 1
UNIPROTKB|F1Q1V6 - symbol:TDRD1 "Uncharacterized protein"... 176 2.9e-09 1
UNIPROTKB|I3LKM6 - symbol:TDRD1 "Uncharacterized protein"... 175 3.7e-09 1
UNIPROTKB|E1BWC3 - symbol:E1BWC3 "Uncharacterized protein... 178 2.2e-08 2
UNIPROTKB|E1BWC2 - symbol:E1BWC2 "Uncharacterized protein... 166 9.6e-08 2
ZFIN|ZDB-GENE-070803-1 - symbol:tdrd1 "tudor domain conta... 157 3.2e-07 1
UNIPROTKB|I3LDE1 - symbol:LOC100521234 "Uncharacterized p... 124 1.1e-06 1
UNIPROTKB|A9CPT4 - symbol:tdrd1 "Tudor domain-containing ... 151 1.3e-06 1
POMBASE|SPBC19F8.04c - symbol:SPBC19F8.04c "nuclease" spe... 128 1.7e-05 2
UNIPROTKB|F1NF10 - symbol:F1NF10 "Uncharacterized protein... 138 1.9e-05 1
UNIPROTKB|E1BGM7 - symbol:TDRD6 "Uncharacterized protein"... 131 0.00015 3
UNIPROTKB|O60522 - symbol:TDRD6 "Tudor domain-containing ... 140 0.00053 2
>TAIR|locus:2159218 [details] [associations]
symbol:Tudor2 "TUDOR-SN protein 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009686
"gibberellin biosynthetic process" evidence=IMP] [GO:0009845 "seed
germination" evidence=IMP] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009306 "protein secretion" evidence=IGI]
[GO:0009651 "response to salt stress" evidence=IGI;RCA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 GO:GO:0005783 GO:GO:0005829 GO:GO:0009506
EMBL:CP002688 GO:GO:0046686 GO:GO:0005635 GO:GO:0006950
GO:GO:0009306 GO:GO:0003723 GO:GO:0009845 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AB010069 Gene3D:2.40.50.90 GO:GO:0009686
SUPFAM:SSF50199 HOGENOM:HOG000173592 KO:K15979 OMA:RFYVQTV
EMBL:BT002044 IPI:IPI00517332 RefSeq:NP_200986.1 UniGene:At.21985
ProteinModelPortal:Q9FLT0 SMR:Q9FLT0 STRING:Q9FLT0 PRIDE:Q9FLT0
EnsemblPlants:AT5G61780.1 GeneID:836300 KEGG:ath:AT5G61780
TAIR:At5g61780 InParanoid:Q9FLT0 PhylomeDB:Q9FLT0
ProtClustDB:CLSN2686944 ArrayExpress:Q9FLT0 Genevestigator:Q9FLT0
Uniprot:Q9FLT0
Length = 985
Score = 1704 (604.9 bits), Expect = 2.3e-313, Sum P(2) = 2.3e-313
Identities = 333/523 (63%), Positives = 412/523 (78%)
Query: 423 GATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHRD 482
GA + R++DFGS+FL SP KG+ +AVA AA P G N+AEL++SRGLG V+ HRD
Sbjct: 474 GAGD-RVMDFGSVFLPSPTKGD----TAVA---AAATP-GANIAELIISRGLGTVVRHRD 524
Query: 483 FEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRI 542
FEERSN+YD +S+K+ P +HI DLT+A KKA+DFLP LQR +I
Sbjct: 525 FEERSNHYDALLAAEARAIAGKKNIHSAKDSPALHIADLTVASAKKAKDFLPSLQRINQI 584
Query: 543 PAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIE 602
AVVEYVLSGHRFK+ IPKE+CSIAF+FSGVRCPGR E YS EA+ LMR+KI+QRDVEI
Sbjct: 585 SAVVEYVLSGHRFKLYIPKESCSIAFAFSGVRCPGRGEPYSEEAIALMRRKIMQRDVEIV 644
Query: 603 VETVDRTGTFLGSLWE--SRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQ 660
VE VDRTGTFLGS+WE S+TN LLEAGLAK+QT FG+DRIP++H+LE AE+SAK+Q
Sbjct: 645 VENVDRTGTFLGSMWEKNSKTNAGTYLLEAGLAKMQTGFGADRIPEAHILEMAERSAKNQ 704
Query: 661 KLKIWENYVEGEEVSNGAA-VEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLA 719
KLKIWENYVEGEEV NG++ VE +QKE LKVVVTE+LGGG+FYVQ VGDQKVAS+Q QLA
Sbjct: 705 KLKIWENYVEGEEVVNGSSKVETRQKETLKVVVTEVLGGGRFYVQTVGDQKVASIQNQLA 764
Query: 720 SLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGN 779
+L+L++AP+IG+FNPKKG+IVLAQFS DNSWNRAMIVN PR V+S ++FEVFYIDYGN
Sbjct: 765 ALSLKDAPIIGSFNPKKGDIVLAQFSLDNSWNRAMIVNGPRGAVQSPEEEFEVFYIDYGN 824
Query: 780 QELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFR 839
QE+VPY+ +RP+DPS+SS P LAQLC LAYIK+P E+++G +A E+L+ T S EFR
Sbjct: 825 QEIVPYSAIRPVDPSVSSAPGLAQLCRLAYIKVPGKEEDFGRDAGEYLHTVTLESGKEFR 884
Query: 840 ALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQA 899
A+VEERD+S VTL+AVD EIS+N M+QEG+AR+E+R+RW +D+QA
Sbjct: 885 AVVEERDTSGGKVKGQGTGTELVVTLIAVDDEISVNAAMLQEGIARMEKRRRWEPKDKQA 944
Query: 900 ALENLEKFQEEAKTARIGMWQYGDIQSDDEDPLPSAVRKVAGG 942
AL+ LEKFQ+EA+ +R G+W+YGDIQSDDED +P VRK G
Sbjct: 945 ALDALEKFQDEARKSRTGIWEYGDIQSDDEDNVP--VRKPGRG 985
Score = 1326 (471.8 bits), Expect = 2.3e-313, Sum P(2) = 2.3e-313
Identities = 261/389 (67%), Positives = 311/389 (79%)
Query: 2 QEVTFRVDYAVPNI-GREFGTVILGDKNVAMLVVSEGWAKVKEQGSQ-KGEASPFLAELL 59
+EV F+VDY V I GREFG+V LG++N+A LVV GWAKV+ G Q + + SP++AEL
Sbjct: 78 KEVAFKVDYKVEAIAGREFGSVYLGNENLAKLVVQNGWAKVRRPGQQNQDKVSPYIAELE 137
Query: 60 RLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQA 119
+LEEQA+ +G GRWSKVPGAAEASIRNLPPSA+GDS NF+AM LL A+KG+PM+GIVEQ
Sbjct: 138 QLEEQAQQEGFGRWSKVPGAAEASIRNLPPSAVGDSGNFDAMGLLAASKGKPMEGIVEQV 197
Query: 120 RDGSTLRVYLLPEFQFVQVFVAGXXXXXXX---XXXXXXXDTD-TEETNGDVSAAEAVAP 175
RDGST+RVYLLPEFQFVQVFVAG D D T +NGD SA E P
Sbjct: 198 RDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQEAVVDPDVTATSNGDASA-ETRGP 256
Query: 176 LNSAQRLXXXXXXXXXXXXDEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYP 235
L +AQRL D PFA++AKYFTE+RVLNR+VRIVLEGVDKF NLIGSV+Y
Sbjct: 257 LTTAQRLAASAASSVEVSSD-PFAMEAKYFTELRVLNRDVRIVLEGVDKFNNLIGSVYYS 315
Query: 236 DGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSN 295
DG+T KDL +ELVENGLAKY+EWSANM++E+AK++LKA +LQ KK R++MW NYVPP SN
Sbjct: 316 DGDTVKDLGLELVENGLAKYVEWSANMLDEEAKKKLKATELQCKKNRVKMWANYVPPASN 375
Query: 296 SKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPA 355
SKAIHDQNFTGKVVEVVSGDC++VADDSIP+G+ +AERRV LSSIR PK+GNPR++EKPA
Sbjct: 376 SKAIHDQNFTGKVVEVVSGDCLVVADDSIPFGSPMAERRVCLSSIRSPKMGNPRREEKPA 435
Query: 356 AYAREAREFLRTRLIGRQVNVQMEYSRKV 384
YAREA+EFLR +LIG +V VQMEYSRK+
Sbjct: 436 PYAREAKEFLRQKLIGMEVIVQMEYSRKI 464
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EP++ +A +++ R+V IV+E VD+ +GS++ + +T + L+E GLAK
Sbjct: 622 EPYSEEAIALMRRKIMQRDVEIVVENVDRTGTFLGSMWEKNSKT--NAGTYLLEAGLAKM 679
Query: 256 -IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS----NSKAIHDQNFTGKVV- 309
+ A+ + E L+ A+ AK +L++W NYV + +SK Q T KVV
Sbjct: 680 QTGFGADRIPE--AHILEMAERSAKNQKLKIWENYVEGEEVVNGSSKVETRQKETLKVVV 737
Query: 310 -EVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG--NPRKDE 352
EV+ G V ++ + LS P IG NP+K +
Sbjct: 738 TEVLGGGRFYVQTVGDQKVASIQNQLAALSLKDAPIIGSFNPKKGD 783
Score = 116 (45.9 bits), Expect = 2.3e-185, Sum P(2) = 2.3e-185
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 298 AIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAY 357
A +Q G+V V SGDC+++ + E+ + LSS+ PK+ ++P A+
Sbjct: 6 ATENQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGGIDEPFAW 65
Query: 358 AREAREFLRTRLIGRQVNVQMEYSRKVV 385
E+REFLR IG++V +++Y + +
Sbjct: 66 --ESREFLRKLCIGKEVAFKVDYKVEAI 91
Score = 116 (45.9 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 43/166 (25%), Positives = 79/166 (47%)
Query: 579 NERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESR----TNVAVILLEAGLAK 634
++ ++ EA ++L RDV I +E VD+ +GS++ S ++ + L+E GLAK
Sbjct: 275 SDPFAMEAKYFTELRVLNRDVRIVLEGVDKFNNLIGSVYYSDGDTVKDLGLELVENGLAK 334
Query: 635 LQTSFGSDRIPDS--HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 692
+ ++ + + L+ E K ++K+W NYV SN A+ Q KVV
Sbjct: 335 Y-VEWSANMLDEEAKKKLKATELQCKKNRVKMWANYVP--PASNSKAIHD-QNFTGKVV- 389
Query: 693 TEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGE 738
E++ G V + + ++ L+ +P +G NP++ E
Sbjct: 390 -EVVSGDCLVVADDSIPFGSPMAERRVCLSSIRSPKMG--NPRREE 432
Score = 62 (26.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 877 LMVQEGLARVERRKRWGSRDRQAA-LENLEKFQEEAKTARIGMWQY--GDIQSDDEDPLP 933
L+VQ G A+V RR ++D+ + + LE+ +E+A+ G W G ++ + P
Sbjct: 109 LVVQNGWAKV-RRPGQQNQDKVSPYIAELEQLEEQAQQEGFGRWSKVPGAAEASIRNLPP 167
Query: 934 SAV 936
SAV
Sbjct: 168 SAV 170
Score = 57 (25.1 bits), Expect = 3.9e-179, Sum P(2) = 3.9e-179
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEPFA +++ F + +EV ++ K + + G F ++LA +V+NG AK
Sbjct: 60 DEPFAWESREFLRKLCIGKEVAFKVDY--KVEAIAGREFGSVYLGNENLAKLVVQNGWAK 117
Score = 48 (22.0 bits), Expect = 3.1e-138, Sum P(2) = 3.1e-138
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 576 PGRNER---YSNEALLLMRQKILQRDVEIEVE 604
P R E+ Y+ EA +RQK++ +V +++E
Sbjct: 428 PRREEKPAPYAREAKEFLRQKLIGMEVIVQME 459
Score = 44 (20.5 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 531 DFLPFLQRSRRIP--AVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNE 585
D + L S+ P +VE V G +V + E + +G++ P R S +
Sbjct: 177 DAMGLLAASKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQ 233
>ZFIN|ZDB-GENE-030131-3124 [details] [associations]
symbol:snd1 "staphylococcal nuclease domain
containing 1" species:7955 "Danio rerio" [GO:0016442 "RNA-induced
silencing complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] InterPro:IPR002071
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 ZFIN:ZDB-GENE-030131-3124
GO:GO:0005737 GO:GO:0003676 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 HOGENOM:HOG000173592
HOVERGEN:HBG057234 EMBL:BX897731 EMBL:BX855622 EMBL:BX890545
EMBL:CR931778 IPI:IPI00493820 UniGene:Dr.76177 SMR:Q5RGK8
Ensembl:ENSDART00000040405 InParanoid:Q5RGK8 Uniprot:Q5RGK8
Length = 913
Score = 669 (240.6 bits), Expect = 4.5e-113, Sum P(3) = 4.5e-113
Identities = 173/485 (35%), Positives = 261/485 (53%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 450 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 509
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
++ +KA+ F PFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 510 IS-GETQKAKQFFPFLQRAGRSEAVVEYVFSGSRLKLYMPKETCLITFLLAGIECPRGSR 568
Query: 579 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 630
N E YS EA+L ++ +LQR+VE+EVE++D+ G F+G L N++V L+E
Sbjct: 569 NMPGGMQVAEPYSEEAMLFTKELVLQREVEVEVESMDKAGNFIGWLHIEGVNLSVALVEN 628
Query: 631 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 688
L+K+ F ++R L AE+SA+ +K K+W NY E EEV+ + + +
Sbjct: 629 ALSKVH--FTAERSSYYKTLVSAEESARQRKEKLWANYEEKPKEEVAQVTEAKERVAKYR 686
Query: 689 KVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 747
V VTEI G FY Q V K+ ++ + + + PV G+F P++GE +A+F AD
Sbjct: 687 SVYVTEITDGLHFYAQDVETGTKLENLMESMRGEIAAQPPVEGSFAPRRGEFCIAKF-AD 745
Query: 748 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQLC 805
W RA + EKVES K VFYIDYGN+E++ +L + P+ S+ PP A
Sbjct: 746 GEWYRARV-----EKVESPA-KVHVFYIDYGNREVLSSTRLAALPPAFSTRTLPPQATEY 799
Query: 806 SLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTL 865
+ AYI++P ED +A + + +N+ + L+ S VTL
Sbjct: 800 AFAYIQVPQDEDARA-DAVDSVVRDIHNT----QCLLNVEYSGSVCP---------QVTL 845
Query: 866 VAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQ 925
D + + +V+EG+ V+ RK + Q + QE AK+AR+ +W+YGD +
Sbjct: 846 QFADTKEDVGLGLVKEGMVMVDIRKE---KYLQKMVTEYLNAQESAKSARLNIWRYGDFR 902
Query: 926 SDDED 930
DD D
Sbjct: 903 DDDAD 907
Score = 302 (111.4 bits), Expect = 4.5e-113, Sum P(3) = 4.5e-113
Identities = 75/196 (38%), Positives = 124/196 (63%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE + ++G++ +P+G +L L++ G A+
Sbjct: 243 EPFAAEAKFFTESRLLQRDVQIILESCPN-QVILGTILHPNGNIT-EL---LLKEGFARC 297
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + + A++ L+AA+ AK+ ++R+W +YV P +N D+ F KV++VV+ D
Sbjct: 298 VDWSMAVYTQGAEK-LRAAERSAKERKVRIWKDYVAPTANLDQ-KDRQFVAKVMQVVNAD 355
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-G---NPRKDEK--PA---AYAREAREFLR 366
I+V +S Y + ++LSSIR P++ G N KD++ P Y EAREFLR
Sbjct: 356 AIVVKLNSGEY------KTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIPYMFEAREFLR 409
Query: 367 TRLIGRQVNVQMEYSR 382
+LIG++VNV ++Y R
Sbjct: 410 KKLIGKKVNVTVDYIR 425
Score = 179 (68.1 bits), Expect = 4.5e-113, Sum P(3) = 4.5e-113
Identities = 52/145 (35%), Positives = 79/145 (54%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F V+ P GRE+G V LG +N+A +V+EG A V+ +G +G +P
Sbjct: 93 KEVCFTVENKTPQ-GREYGMVYLGKDTSGENIAESLVAEGLAMVRREGI-RGN-NPEQVR 149
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L LE+QAK G WS+ G +IR+L + I + NF +D+ +P+ I+E
Sbjct: 150 LCDLEDQAKSSKKGLWSE--GGGSHTIRDLKYT-IENPRNF-----VDSLHQKPVNAIIE 201
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDG +R LLP++ V V ++G
Sbjct: 202 HVRDGCMVRALLLPDYYLVTVMLSG 226
Score = 149 (57.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 54/218 (24%), Positives = 99/218 (45%)
Query: 461 AGVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
+G N+AE +V+ GL V R+ +N S+ I+D
Sbjct: 119 SGENIAESLVAEGLAMV--RREGIRGNNPEQVRLCDLEDQAKSSKKGLWSEGGGSHTIRD 176
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP---- 576
L ++ R+F+ L + + + A++E+V G + L+ + + SG++ P
Sbjct: 177 LKYT-IENPRNFVDSLHQ-KPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSGIKSPTFKR 234
Query: 577 ---GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAG 631
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 235 EADGSETPEPFAAEAKFFTESRLLQRDVQIILESCPNQ-VILGTILHPNGNITELLLKEG 293
Query: 632 LAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYV 669
A+ + + L AE+SAK +K++IW++YV
Sbjct: 294 FARCVDWSMAVYTQGAEKLRAAERSAKERKVRIWKDYV 331
Score = 119 (46.9 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EP++ +A FT+ VL REV + +E +DK N IG + + +G +L++ LVEN L+K
Sbjct: 578 EPYSEEAMLFTKELVLQREVEVEVESMDKAGNFIGWL-HIEGV---NLSVALVENALSK- 632
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 289
+ ++A + L +A+ A++ + ++W NY
Sbjct: 633 VHFTAE--RSSYYKTLVSAEESARQRKEKLWANY 664
Score = 109 (43.4 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 290 VPPQ-SNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKI--- 345
VP Q +S+A Q G V V+SG IIV P G ER++NLS+IR +
Sbjct: 5 VPAQVQSSQASAPQLQRGIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGALARR 62
Query: 346 ---GNP-RKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
G P KD +A +AREF+R ++IG++V +E
Sbjct: 63 AIQGQPDTKDTPDEPWAFQAREFMRKKVIGKEVCFTVE 100
Score = 108 (43.1 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 49/199 (24%), Positives = 82/199 (41%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEP+A A+ F +V+ +EV +E G V+ + +++A LV GLA
Sbjct: 75 DEPWAFQAREFMRKKVIGKEVCFTVENKTPQGREYGMVYLGKDTSGENIAESLVAEGLAM 134
Query: 255 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTN-----------YV--PPQSNSKAIHD 301
+ R D QAK ++ +W+ Y P++ ++H
Sbjct: 135 VRREGIRGNNPEQVRLCDLED-QAKSSKKGLWSEGGGSHTIRDLKYTIENPRNFVDSLH- 192
Query: 302 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRK-DEKPAAYARE 360
Q ++E V C++ A +P + V LS I+ P E P +A E
Sbjct: 193 QKPVNAIIEHVRDGCMVRAL-LLPDYYLVT---VMLSGIKSPTFKREADGSETPEPFAAE 248
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 249 AKFFTESRLLQRDVQIILE 267
Score = 89 (36.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 38/143 (26%), Positives = 59/143 (41%)
Query: 1 MQEVTFRVDYAVPNIG-REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELL 59
++ T ++ VP R TV +G N+A +VS+G A V + S ELL
Sbjct: 424 IRAATNAMEMGVPAFPERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELL 483
Query: 60 RLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQA 119
E +A G G SK E I + + G++ GR + +VE
Sbjct: 484 AAEARAIKNGKGLHSK----KEVPIHRVADIS-GETQKAKQFFPFLQRAGRS-EAVVEYV 537
Query: 120 RDGSTLRVYLLPEFQFVQVFVAG 142
GS L++Y+ E + +AG
Sbjct: 538 FSGSRLKLYMPKETCLITFLLAG 560
Score = 68 (29.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 878 MVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYG 922
+V EGLA V R G+ Q L +LE ++AK+++ G+W G
Sbjct: 127 LVAEGLAMVRREGIRGNNPEQVRLCDLE---DQAKSSKKGLWSEG 168
Score = 50 (22.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 337 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
L+ I CP+ P + Y+ EA F + ++ R+V V++E
Sbjct: 558 LAGIECPRGSRNMPGGMQVAEPYSEEAMLFTKELVLQREVEVEVE 602
Score = 41 (19.5 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 20 GTVILGDKNVAMLVVSEGWAK 40
GT++ + N+ L++ EG+A+
Sbjct: 276 GTILHPNGNITELLLKEGFAR 296
Score = 41 (19.5 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 28/120 (23%), Positives = 51/120 (42%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTF---LG-SLWESRTNVAVILLEAGLAKLQT 637
Y EA +R+K++ + V + V+ + R T +G + RT V + +A+
Sbjct: 400 YMFEAREFLRKKLIGKKVNVTVDYI-RAATNAMEMGVPAFPERTCATVTIGGINIAEALV 458
Query: 638 SFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
S G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 459 SKGLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 512
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 268 KRRLKAADLQAKKTRLRMWTNYVPPQSNSKA 298
K + D++ +K +M T Y+ Q ++K+
Sbjct: 860 KEGMVMVDIRKEKYLQKMVTEYLNAQESAKS 890
>RGD|631340 [details] [associations]
symbol:Snd1 "staphylococcal nuclease and tudor domain containing
1" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
RGD:631340 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355 GO:GO:0006351
GO:GO:0003676 GO:GO:0003713 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
CTD:27044 HOVERGEN:HBG057234 KO:K15979 EMBL:AY697864 EMBL:BC072471
EMBL:U83883 IPI:IPI00471608 RefSeq:NP_073185.2 UniGene:Rn.36148
ProteinModelPortal:Q66X93 SMR:Q66X93 IntAct:Q66X93 STRING:Q66X93
PhosphoSite:Q66X93 PRIDE:Q66X93 GeneID:64635 KEGG:rno:64635
UCSC:RGD:631340 InParanoid:Q66X93 NextBio:613608
Genevestigator:Q66X93 GermOnline:ENSRNOG00000031173 Uniprot:Q66X93
Length = 909
Score = 661 (237.7 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 176/486 (36%), Positives = 261/486 (53%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 446 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 505
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 506 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 564
Query: 579 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 630
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 565 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEH 624
Query: 631 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 688
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 625 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEEQPVEEVMPVLEEKERSASYK 682
Query: 689 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 746
V VTEI FYVQ V G Q + + + + S PV GA+ P++GE +A+F
Sbjct: 683 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRSDISSHPPVEGAYAPRRGEFCIAKF-V 740
Query: 747 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 804
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 741 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGALPPAFSTRVLPAQATE 794
Query: 805 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 864
+ A+I++P ED +A + + N+ VE +S HVT
Sbjct: 795 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVT 840
Query: 865 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 924
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 841 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 897
Query: 925 QSDDED 930
++DD D
Sbjct: 898 RADDAD 903
Score = 310 (114.2 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 75/195 (38%), Positives = 125/195 (64%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 241 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 295
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 296 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 353
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 367
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 354 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 407
Query: 368 RLIGRQVNVQMEYSR 382
+LIG++V+V ++Y R
Sbjct: 408 KLIGKKVSVTVDYIR 422
Score = 163 (62.4 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 49/145 (33%), Positives = 77/145 (53%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F ++ P GRE+G + LG +N+A +V+EG A +E G + +P
Sbjct: 92 KEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLASRRE-GMRAN--NPEQNR 147
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L EEQAK G WS+ G +IR+L + I + +F +D++ +P+ I+E
Sbjct: 148 LSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF-----VDSHHQKPVNAIIE 199
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGS +R LLP+ V V ++G
Sbjct: 200 HVRDGSVVRALLLPDHYLVTVMLSG 224
Score = 147 (56.8 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 65/278 (23%), Positives = 122/278 (43%)
Query: 462 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 521
G N+AE +V+ GL + R+ +N S+ I+DL
Sbjct: 119 GENIAESLVAEGLAS---RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGSHTIRDL 175
Query: 522 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 576
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 176 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRE 233
Query: 577 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 632
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 234 TDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKEGF 292
Query: 633 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 692
A+ + + L AE+ AK ++L+IW +YV A ++ K K+ + V+
Sbjct: 293 ARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFVAKVM 347
Query: 693 TEILGGGKFYVQ-QVGDQK---VASVQQ-QLASLNLQE 725
++L V+ GD K ++S++ +L N+Q+
Sbjct: 348 -QVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGDNIQD 384
Score = 133 (51.9 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 74 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAS 133
Query: 255 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 312
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 134 RREGMRANNPEQN---RLSECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 186
Query: 313 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 360
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 187 DSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRETDGSETPEPFAAE 246
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 247 AKFFTESRLLQRDVQIILE 265
Score = 116 (45.9 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 574 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEHALSK- 628
Query: 256 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 289
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 629 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 660
Score = 96 (38.9 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 306 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 358
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 21 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 78
Query: 359 REAREFLRTRLIGRQVNVQME 379
AREFLR +LIG++V +E
Sbjct: 79 FPAREFLRKKLIGKEVCFTIE 99
Score = 94 (38.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 76
R TV +G N+A +VS+G A V + S ELL E +A G G SK
Sbjct: 437 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 495
Query: 77 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFV 136
E I + + GD+ GR + +VE GS L++YL E +
Sbjct: 496 ---KEVPIHRVADIS-GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLI 550
Query: 137 QVFVAG 142
+AG
Sbjct: 551 TFLLAG 556
Score = 48 (22.0 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 337 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 554 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 598
Score = 43 (20.2 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 20 GTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VP 77
GT++ + N+ L++ EG+A+ + AE LR E+ AK + L W VP
Sbjct: 274 GTILHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVP 330
Query: 78 GAA 80
A
Sbjct: 331 PTA 333
Score = 41 (19.5 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 639
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 397 YMFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 456
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 457 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 508
>UNIPROTKB|Q66X93 [details] [associations]
symbol:Snd1 "Staphylococcal nuclease domain-containing
protein 1" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
RGD:631340 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355 GO:GO:0006351
GO:GO:0003676 GO:GO:0003713 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
CTD:27044 HOVERGEN:HBG057234 KO:K15979 EMBL:AY697864 EMBL:BC072471
EMBL:U83883 IPI:IPI00471608 RefSeq:NP_073185.2 UniGene:Rn.36148
ProteinModelPortal:Q66X93 SMR:Q66X93 IntAct:Q66X93 STRING:Q66X93
PhosphoSite:Q66X93 PRIDE:Q66X93 GeneID:64635 KEGG:rno:64635
UCSC:RGD:631340 InParanoid:Q66X93 NextBio:613608
Genevestigator:Q66X93 GermOnline:ENSRNOG00000031173 Uniprot:Q66X93
Length = 909
Score = 661 (237.7 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 176/486 (36%), Positives = 261/486 (53%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 446 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 505
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 506 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 564
Query: 579 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 630
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 565 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEH 624
Query: 631 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 688
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 625 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEEQPVEEVMPVLEEKERSASYK 682
Query: 689 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 746
V VTEI FYVQ V G Q + + + + S PV GA+ P++GE +A+F
Sbjct: 683 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRSDISSHPPVEGAYAPRRGEFCIAKF-V 740
Query: 747 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 804
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 741 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGALPPAFSTRVLPAQATE 794
Query: 805 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 864
+ A+I++P ED +A + + N+ VE +S HVT
Sbjct: 795 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVT 840
Query: 865 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 924
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 841 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 897
Query: 925 QSDDED 930
++DD D
Sbjct: 898 RADDAD 903
Score = 310 (114.2 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 75/195 (38%), Positives = 125/195 (64%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 241 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 295
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 296 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 353
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 367
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 354 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 407
Query: 368 RLIGRQVNVQMEYSR 382
+LIG++V+V ++Y R
Sbjct: 408 KLIGKKVSVTVDYIR 422
Score = 163 (62.4 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 49/145 (33%), Positives = 77/145 (53%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F ++ P GRE+G + LG +N+A +V+EG A +E G + +P
Sbjct: 92 KEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLASRRE-GMRAN--NPEQNR 147
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L EEQAK G WS+ G +IR+L + I + +F +D++ +P+ I+E
Sbjct: 148 LSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF-----VDSHHQKPVNAIIE 199
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGS +R LLP+ V V ++G
Sbjct: 200 HVRDGSVVRALLLPDHYLVTVMLSG 224
Score = 147 (56.8 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 65/278 (23%), Positives = 122/278 (43%)
Query: 462 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 521
G N+AE +V+ GL + R+ +N S+ I+DL
Sbjct: 119 GENIAESLVAEGLAS---RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGSHTIRDL 175
Query: 522 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 576
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 176 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRE 233
Query: 577 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 632
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 234 TDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKEGF 292
Query: 633 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 692
A+ + + L AE+ AK ++L+IW +YV A ++ K K+ + V+
Sbjct: 293 ARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFVAKVM 347
Query: 693 TEILGGGKFYVQ-QVGDQK---VASVQQ-QLASLNLQE 725
++L V+ GD K ++S++ +L N+Q+
Sbjct: 348 -QVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGDNIQD 384
Score = 133 (51.9 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 74 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAS 133
Query: 255 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 312
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 134 RREGMRANNPEQN---RLSECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 186
Query: 313 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 360
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 187 DSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRETDGSETPEPFAAE 246
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 247 AKFFTESRLLQRDVQIILE 265
Score = 116 (45.9 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 574 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEHALSK- 628
Query: 256 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 289
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 629 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 660
Score = 96 (38.9 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 306 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 358
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 21 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 78
Query: 359 REAREFLRTRLIGRQVNVQME 379
AREFLR +LIG++V +E
Sbjct: 79 FPAREFLRKKLIGKEVCFTIE 99
Score = 94 (38.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 76
R TV +G N+A +VS+G A V + S ELL E +A G G SK
Sbjct: 437 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 495
Query: 77 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFV 136
E I + + GD+ GR + +VE GS L++YL E +
Sbjct: 496 ---KEVPIHRVADIS-GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLI 550
Query: 137 QVFVAG 142
+AG
Sbjct: 551 TFLLAG 556
Score = 48 (22.0 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 337 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 554 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 598
Score = 43 (20.2 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 20 GTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VP 77
GT++ + N+ L++ EG+A+ + AE LR E+ AK + L W VP
Sbjct: 274 GTILHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVP 330
Query: 78 GAA 80
A
Sbjct: 331 PTA 333
Score = 41 (19.5 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 639
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 397 YMFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 456
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 457 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 508
>MGI|MGI:1929266 [details] [associations]
symbol:Snd1 "staphylococcal nuclease and tudor domain
containing 1" species:10090 "Mus musculus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016442
"RNA-induced silencing complex" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
MGI:MGI:1929266 GO:GO:0005739 GO:GO:0005634 GO:GO:0042470
GO:GO:0006355 GO:GO:0006351 GO:GO:0003676 GO:GO:0090305
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525
SUPFAM:SSF50199 CTD:27044 GeneTree:ENSGT00510000047270
HOGENOM:HOG000173592 HOVERGEN:HBG057234 KO:K15979 OMA:IWKDYVA
OrthoDB:EOG45755W EMBL:AB021491 EMBL:AK088028 EMBL:AK161591
EMBL:BC007126 IPI:IPI00123129 RefSeq:NP_062750.2 UniGene:Mm.439987
ProteinModelPortal:Q78PY7 SMR:Q78PY7 DIP:DIP-32118N IntAct:Q78PY7
STRING:Q78PY7 PhosphoSite:Q78PY7 PaxDb:Q78PY7 PRIDE:Q78PY7
Ensembl:ENSMUST00000001460 GeneID:56463 KEGG:mmu:56463
UCSC:uc009bct.1 InParanoid:Q78PY7 NextBio:312718 Bgee:Q78PY7
Genevestigator:Q78PY7 GermOnline:ENSMUSG00000001424 Uniprot:Q78PY7
Length = 910
Score = 656 (236.0 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 174/486 (35%), Positives = 261/486 (53%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 579 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 630
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEQ 625
Query: 631 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 688
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 626 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEERPVEEVMPVLEEKERSASYK 683
Query: 689 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 746
V VTEI FYVQ V G Q + + + + + PV G++ P++GE +A+F
Sbjct: 684 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRNDISSHPPVEGSYAPRRGEFCIAKF-V 741
Query: 747 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 804
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 742 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATE 795
Query: 805 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 864
+ A+I++P ED +A + + N+ VE +S HVT
Sbjct: 796 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVT 841
Query: 865 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 924
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 842 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 898
Query: 925 QSDDED 930
++DD D
Sbjct: 899 RADDAD 904
Score = 317 (116.6 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 77/195 (39%), Positives = 125/195 (64%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE +NL+G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNLLGTILHPNGNIT-EL---LLKEGFARC 296
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 367
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 368 RLIGRQVNVQMEYSR 382
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 160 (61.4 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 48/145 (33%), Positives = 76/145 (52%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F ++ P GRE+G + LG +N+A +V+EG A + +G + +P
Sbjct: 93 KEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRAN--NPEQNR 148
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L EEQAK G WS+ G +IR+L + I + +F +D++ +P+ I+E
Sbjct: 149 LSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF-----VDSHHQKPVNAIIE 200
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGS +R LLP V V ++G
Sbjct: 201 HVRDGSVVRALLLPGHHLVTVMLSG 225
Score = 141 (54.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 55/222 (24%), Positives = 104/222 (46%)
Query: 518 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 576
I+DL ++ R F+ + + A++E+V G + L+ + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSGIKCPT 230
Query: 577 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 628
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-LLGTILHPNGNITELLL 289
Query: 629 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 688
+ G A+ + + L AE+ AK ++L+IW +YV A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFV 344
Query: 689 KVVVTEILGGGKFYVQ-QVGDQK---VASVQQ-QLASLNLQE 725
V+ ++L V+ GD K ++S++ +L N+Q+
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYKTIHLSSIRPPRLEGDNIQD 385
Score = 130 (50.8 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 54/199 (27%), Positives = 86/199 (43%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 255 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTN-----------Y-VPPQSNSKAIHD 301
E AN E++ RL + QAK ++ MW+ Y + + H
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKASKKGMWSEGNGSHTIRDLKYTIENPRHFVDSHH 191
Query: 302 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRK-DEKPAAYARE 360
Q ++E V D +V +P G+ L V LS I+CP E P +A E
Sbjct: 192 QKPVNAIIEHVR-DGSVVRALLLP-GHHLVT--VMLSGIKCPTFRRETDGSETPEPFAAE 247
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 115 (45.5 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEQALSK- 629
Query: 256 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 289
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 661
Score = 96 (38.9 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 306 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 358
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 79
Query: 359 REAREFLRTRLIGRQVNVQME 379
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 94 (38.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 76
R TV +G N+A +VS+G A V + S ELL E +A G G SK
Sbjct: 438 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 496
Query: 77 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFV 136
E I + + GD+ GR + +VE GS L++YL E +
Sbjct: 497 ---KEVPIHRVADIS-GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLI 551
Query: 137 QVFVAG 142
+AG
Sbjct: 552 TFLLAG 557
Score = 48 (22.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 337 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 43 (20.2 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 20 GTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VP 77
GT++ + N+ L++ EG+A+ + AE LR E+ AK + L W VP
Sbjct: 275 GTILHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVP 331
Query: 78 GAA 80
A
Sbjct: 332 PTA 334
Score = 41 (19.5 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 639
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>UNIPROTKB|Q7KZF4 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042470 "melanosome" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 EMBL:U22055 GO:GO:0005739
GO:GO:0005634 GO:GO:0005737 GO:GO:0042470 GO:GO:0019048
GO:GO:0006355 GO:GO:0006351 GO:GO:0003676 GO:GO:0090305
GO:GO:0003712 GO:GO:0031047 GO:GO:0016442 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90
eggNOG:COG1525 SUPFAM:SSF50199 CTD:27044 HOVERGEN:HBG057234
KO:K15979 OMA:IWKDYVA EMBL:BT009785 EMBL:BC017180 IPI:IPI00140420
PIR:I38968 RefSeq:NP_055205.2 UniGene:Hs.122523 PDB:2E6N PDB:2HQE
PDB:2HQX PDB:2O4X PDB:3BDL PDB:3OMC PDB:3OMG PDBsum:2E6N
PDBsum:2HQE PDBsum:2HQX PDBsum:2O4X PDBsum:3BDL PDBsum:3OMC
PDBsum:3OMG ProteinModelPortal:Q7KZF4 SMR:Q7KZF4 DIP:DIP-29613N
IntAct:Q7KZF4 STRING:Q7KZF4 PhosphoSite:Q7KZF4 DMDM:60415926
REPRODUCTION-2DPAGE:IPI00140420 PaxDb:Q7KZF4 PeptideAtlas:Q7KZF4
PRIDE:Q7KZF4 DNASU:27044 Ensembl:ENST00000354725 GeneID:27044
KEGG:hsa:27044 UCSC:uc003vmi.3 GeneCards:GC07P127292
HGNC:HGNC:30646 HPA:CAB019323 HPA:HPA002529 HPA:HPA002632
MIM:602181 neXtProt:NX_Q7KZF4 PharmGKB:PA162404053
InParanoid:Q7KZF4 OrthoDB:EOG45755W PhylomeDB:Q7KZF4 ChiTaRS:SND1
EvolutionaryTrace:Q7KZF4 GenomeRNAi:27044 NextBio:49626
ArrayExpress:Q7KZF4 Bgee:Q7KZF4 CleanEx:HS_SND1
Genevestigator:Q7KZF4 Uniprot:Q7KZF4
Length = 910
Score = 657 (236.3 bits), Expect = 4.5e-111, Sum P(3) = 4.5e-111
Identities = 172/486 (35%), Positives = 262/486 (53%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 579 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 630
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDGANLSVLLVEH 625
Query: 631 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 688
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 626 ALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSASYK 683
Query: 689 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 746
V VTEI FYVQ V G Q + + + + + PV G++ P++GE +A+F
Sbjct: 684 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-V 741
Query: 747 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 804
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 742 DGEWYRARV-----EKVESPA-KIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATE 795
Query: 805 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 864
+ A+I++P +D+ +A + + N+ + L+ S HVT
Sbjct: 796 YAFAFIQVPQ-DDDARTDAVDSVVRDIQNT----QCLLNVEHLSAGCP---------HVT 841
Query: 865 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 924
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 842 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 898
Query: 925 QSDDED 930
++DD D
Sbjct: 899 RADDAD 904
Score = 308 (113.5 bits), Expect = 4.5e-111, Sum P(3) = 4.5e-111
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 367
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 368 RLIGRQVNVQMEYSR 382
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 166 (63.5 bits), Expect = 4.5e-111, Sum P(3) = 4.5e-111
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F ++ P GRE+G + LG +N+A +V+EG A + +G + +P
Sbjct: 93 KEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRAN--NPEQNR 148
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L EEQAK G WS+ G +IR+L + I + +F +D++ +P+ I+E
Sbjct: 149 LSECEEQAKAAKKGMWSE--GNGSHTIRDLKYT-IENPRHF-----VDSHHQKPVNAIIE 200
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGS +R LLP++ V V ++G
Sbjct: 201 HVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 145 (56.1 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 518 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 576
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 577 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 628
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 629 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 688
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 689 KVVVTEILGGGKFYVQ-QVGDQK 710
V+ ++L V+ GD K
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYK 366
Score = 129 (50.5 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 55/199 (27%), Positives = 84/199 (42%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 255 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 312
E AN E++ RL + QAK + MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKAAKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 313 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 360
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 116 (45.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 32/94 (34%), Positives = 56/94 (59%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HIDGA---NLSVLLVEHALSK- 629
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 289
+ ++A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTAE--RSSYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 96 (38.9 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 306 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 358
G + V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIIKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 359 REAREFLRTRLIGRQVNVQME 379
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 94 (38.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 76
R TV +G N+A +VS+G A V + S ELL E +A G G SK
Sbjct: 438 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 496
Query: 77 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFV 136
E I + + GD+ GR + +VE GS L++YL E +
Sbjct: 497 ---KEVPIHRVADIS-GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLI 551
Query: 137 QVFVAG 142
+AG
Sbjct: 552 TFLLAG 557
Score = 48 (22.0 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 337 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 42 (19.8 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 20 GTVILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 61
GT++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 275 GTILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 41 (19.5 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 639
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>UNIPROTKB|Q863B3 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9913 "Bos taurus" [GO:0042470 "melanosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005739 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355
GO:GO:0006351 GO:GO:0003676 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
EMBL:AY273893 EMBL:BC104504 IPI:IPI00695802 RefSeq:NP_991353.1
UniGene:Bt.61314 ProteinModelPortal:Q863B3 SMR:Q863B3 STRING:Q863B3
PRIDE:Q863B3 Ensembl:ENSBTAT00000014154 GeneID:404098
KEGG:bta:404098 CTD:27044 GeneTree:ENSGT00510000047270
HOGENOM:HOG000173592 HOVERGEN:HBG057234 KO:K15979 OMA:IWKDYVA
NextBio:20817543 ArrayExpress:Q863B3 Uniprot:Q863B3
Length = 910
Score = 653 (234.9 bits), Expect = 7.3e-111, Sum P(3) = 7.3e-111
Identities = 176/511 (34%), Positives = 268/511 (52%)
Query: 438 LSPIKGEGDDASAVAQSNAAGQP-AGVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXX 495
+ P D A ++ A G+N+AE +VS+GL VI +R D ++RS++YD
Sbjct: 422 IRPASPATDTVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLA 481
Query: 496 XXXXXXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRF 555
+S KE P+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R
Sbjct: 482 AEARAIKNGKGLHSKKEVPIHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL 540
Query: 556 KVLIPKETCSIAFSFSGVRCP--GRN--------ERYSNEALLLMRQKILQRDVEIEVET 605
K+ +PKETC I F +G+ CP RN E +S EA L ++ +LQR+VE+EVE+
Sbjct: 541 KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVES 600
Query: 606 VDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 665
+D+ G F+G L N++V+L+E L+K+ F ++R L AE++AK +K K+W
Sbjct: 601 MDKAGNFIGWLHIDGANLSVLLVEHALSKVH--FTAERSAYYKSLLSAEEAAKQKKEKVW 658
Query: 666 ENYVEGEEVSNGAAVEGKQKEVL--KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASL 721
+Y E +E K++ V VTEI FYVQ V G Q + + + + +
Sbjct: 659 AHYEEQPVEELMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRND 717
Query: 722 NLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQE 781
PV G++ P++GE +A+F D W RA + EKVES K VFYIDYGN+E
Sbjct: 718 IASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARV-----EKVESPA-KVHVFYIDYGNRE 770
Query: 782 LVPYNKLRPIDPSLSST--PPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFR 839
++P +L + P+ S+ P A + A+I++P ED +A + + N+ +
Sbjct: 771 ILPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQDEDAR-TDAVDSVVRDIQNT----Q 825
Query: 840 ALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQA 899
L+ S HVTL D++ + +V+EGL VE RK + Q
Sbjct: 826 CLLNVEHLSAGCP---------HVTLQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQK 873
Query: 900 ALENLEKFQEEAKTARIGMWQYGDIQSDDED 930
+ QE AK+AR+ +W+YGD ++DD D
Sbjct: 874 VITEYLNAQESAKSARLNLWRYGDFRADDAD 904
Score = 308 (113.5 bits), Expect = 7.3e-111, Sum P(3) = 7.3e-111
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 367
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 368 RLIGRQVNVQMEYSR 382
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 168 (64.2 bits), Expect = 7.3e-111, Sum P(3) = 7.3e-111
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F ++ P GRE+G + LG +N+A +V+EG A + +G + +P
Sbjct: 93 KEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRAN--NPEQNR 148
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L EEQAK G WS+ G +IR+L + I + +F +D++ +P+ I+E
Sbjct: 149 LAECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF-----VDSHHQKPVNAIIE 200
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGS +R LLP++ V V ++G
Sbjct: 201 HVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 145 (56.1 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 518 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 576
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 577 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 628
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 629 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 688
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 689 KVVVTEILGGGKFYVQ-QVGDQK 710
V+ ++L V+ GD K
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYK 366
Score = 129 (50.5 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 255 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 312
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLAECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 313 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 360
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 116 (45.9 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HIDGA---NLSVLLVEHALSK- 629
Query: 256 IEWSANMMEEDAK-RRLKAADLQAKKTRLRMWTNY 289
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTA---ERSAYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 98 (39.6 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 306 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPK------IGNP-RKDEKPAAYA 358
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPWA 79
Query: 359 REAREFLRTRLIGRQVNVQME 379
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 94 (38.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 76
R TV +G N+A +VS+G A V + S ELL E +A G G SK
Sbjct: 438 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 496
Query: 77 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFV 136
E I + + GD+ GR + +VE GS L++YL E +
Sbjct: 497 ---KEVPIHRVADIS-GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLI 551
Query: 137 QVFVAG 142
+AG
Sbjct: 552 TFLLAG 557
Score = 48 (22.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 337 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 42 (19.8 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 20 GTVILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 61
GT++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 275 GTILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 42 (19.8 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 639
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATDTVPAFSERTCATVTIGGINIAEALVSK 457
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>UNIPROTKB|E2RH91 [details] [associations]
symbol:SND1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0016442
"RNA-induced silencing complex" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 GO:GO:0005739 GO:GO:0003676 GO:GO:0090305
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
CTD:27044 GeneTree:ENSGT00510000047270 KO:K15979 OMA:IWKDYVA
EMBL:AAEX03009276 EMBL:AAEX03009275 RefSeq:XP_532436.3
Ensembl:ENSCAFT00000002687 GeneID:475204 KEGG:cfa:475204
Uniprot:E2RH91
Length = 910
Score = 654 (235.3 bits), Expect = 9.2e-111, Sum P(3) = 9.2e-111
Identities = 173/486 (35%), Positives = 261/486 (53%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 579 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 630
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDSANLSVLLVEH 625
Query: 631 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 688
L+K+ F ++R L AE++AK +K K+W +Y E EEV + +
Sbjct: 626 ALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEVVPVLEEKERSASYK 683
Query: 689 KVVVTEILGGGKFYVQQV--GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 746
V VTEI FYVQ V G Q + + + + + PV G++ P++GE +A+F
Sbjct: 684 PVFVTEITDDLHFYVQDVETGTQ-LEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-V 741
Query: 747 DNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQL 804
D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A
Sbjct: 742 DGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATE 795
Query: 805 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 864
+ A+I++P ED +A + + N+ + L+ S HVT
Sbjct: 796 YAFAFIQVPQDEDAR-TDAVDSVVRDIQNT----QCLLNVEHLSAGCP---------HVT 841
Query: 865 LVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDI 924
L D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD
Sbjct: 842 LQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDF 898
Query: 925 QSDDED 930
++DD D
Sbjct: 899 RADDAD 904
Score = 308 (113.5 bits), Expect = 9.2e-111, Sum P(3) = 9.2e-111
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 367
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 368 RLIGRQVNVQMEYSR 382
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 166 (63.5 bits), Expect = 9.2e-111, Sum P(3) = 9.2e-111
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F ++ P GRE+G + LG +N+A +V+EG A + +G + +P
Sbjct: 93 KEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRAN--NPEQNR 148
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L EEQAK G WS+ G +IR+L + I + +F +D++ +P+ I+E
Sbjct: 149 LSECEEQAKAAKKGMWSE--GNGSHTIRDLKYT-IENPRHF-----VDSHHQKPVNAIIE 200
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGS +R LLP++ V V ++G
Sbjct: 201 HVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 145 (56.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 518 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 576
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 577 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 628
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 629 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 688
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 689 KVVVTEILGGGKFYVQ-QVGDQK 710
V+ ++L V+ GD K
Sbjct: 345 AKVM-QVLNADAIVVKLNSGDYK 366
Score = 121 (47.7 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 54/199 (27%), Positives = 83/199 (41%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DE +A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEAWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 255 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 312
E AN E++ RL + QAK + MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKAAKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 313 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 360
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 111 (44.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF+ +A FT+ VL REV + +E +DK N IG + ++A +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHI---DSA-NLSVLLVEHALSK- 629
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 289
+ ++A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTAE--RSSYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 102 (41.0 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 33/81 (40%), Positives = 43/81 (53%)
Query: 306 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 358
G V V+SG IIV P G ER++NLS+IR + P KD A+A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEAWA 79
Query: 359 REAREFLRTRLIGRQVNVQME 379
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 94 (38.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 76
R TV +G N+A +VS+G A V + S ELL E +A G G SK
Sbjct: 438 RTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK- 496
Query: 77 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFV 136
E I + + GD+ GR + +VE GS L++YL E +
Sbjct: 497 ---KEVPIHRVADIS-GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLI 551
Query: 137 QVFVAG 142
+AG
Sbjct: 552 TFLLAG 557
Score = 48 (22.0 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 337 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 379
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 42 (19.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 20 GTVILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 61
GT++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 275 GTILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 41 (19.5 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 639
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
>FB|FBgn0035121 [details] [associations]
symbol:Tudor-SN "Tudor-SN" species:7227 "Drosophila
melanogaster" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA;TAS] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005875 EMBL:AE014296 GO:GO:0005811 GO:GO:0003676
GO:GO:0016788 GO:GO:0031047 GO:GO:0016442 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 KO:K15979 OMA:IWKDYVA
FlyBase:FBgn0035121 EMBL:BT003270 RefSeq:NP_612021.1 UniGene:Dm.795
PDB:2WAC PDBsum:2WAC SMR:Q9W0S7 IntAct:Q9W0S7 MINT:MINT-801242
STRING:Q9W0S7 EnsemblMetazoa:FBtr0072519 EnsemblMetazoa:FBtr0332107
GeneID:38045 KEGG:dme:Dmel_CG7008 UCSC:CG7008-RA CTD:38045
InParanoid:Q9W0S7 EvolutionaryTrace:Q9W0S7 GenomeRNAi:38045
NextBio:806702 Uniprot:Q9W0S7
Length = 926
Score = 467 (169.5 bits), Expect = 2.0e-79, Sum P(3) = 2.0e-79
Identities = 142/488 (29%), Positives = 230/488 (47%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G NVAE +V++GL + +R D ++RS+ YD ++ K+ + + D
Sbjct: 456 GQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVND 515
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP---- 576
LT+ + +LP QR+ R A+VE+V SG R ++ +PK++C + F +G+ CP
Sbjct: 516 LTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAGISCPRSSR 575
Query: 577 ----G----RNERYSNEALLLMRQKILQRDVEIEVETVDRTGT-FLGSLW-ESRTNVAVI 626
G E + +EAL R+++LQRDV + ++T D+ G+ +G LW +S N++V
Sbjct: 576 PALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVA 635
Query: 627 LLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKE 686
L+E GLA++ F +++ L+ AE AK+ K IW NYVE EV V ++KE
Sbjct: 636 LVEEGLAEVH--FSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVE--EVPKEKTVTEEEKE 691
Query: 687 VLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQE--APVIGAF--NPKKGEIVLA 742
KVV + V ++ + Q + L+ + + F NP
Sbjct: 692 D-KVVAERKVNYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTP 750
Query: 743 QFSADNSWNRAMIVNA-PREKVESVN-DKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPP 800
+ D + + N R KVE V V YIDYGN+E +P N+L + P+ SS P
Sbjct: 751 K-RGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAALPPAFSSEKP 809
Query: 801 LAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXX 860
A +LA + +P ++E EA +E N + ++ S
Sbjct: 810 YATEYALALVALPT-DNEDKEEALRAFSEDVLNHKVQLNVELKVTGSPNLA--------- 859
Query: 861 XHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQ 920
TL ++ +V EGL E+R G R + ++ + QE A+ A + +W+
Sbjct: 860 ---TLRDPTTKVDFGKQLVAEGLVLAEQR---GERKLKELVDQYKAAQEAARVAHLAIWK 913
Query: 921 YGDIQSDD 928
YGDI DD
Sbjct: 914 YGDITQDD 921
Score = 251 (93.4 bits), Expect = 2.0e-79, Sum P(3) = 2.0e-79
Identities = 76/204 (37%), Positives = 113/204 (55%)
Query: 197 PFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYI 256
PFA +A+Y+ E R+L R+V I LE V+ N IG++ YP G A+ L E GLAK +
Sbjct: 248 PFADEARYYVETRLLQRDVEIRLESVNN-SNFIGTILYPKGNIAESLLRE----GLAKCV 302
Query: 257 EWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVP--PQSNSKAIHDQNFTGKVVEVVSG 314
+WS +M+ + L+AA+ AK+ RLR W +Y P NSK +++F+G VVEV +G
Sbjct: 303 DWSMAVMKTGTDK-LRAAERFAKEKRLRQWQDYQAKTPAFNSK---EKDFSGTVVEVFNG 358
Query: 315 DCIIVADDSIPYGNALAERRVNLSSIRCPK-----IGN---------PR-KDEKPA---A 356
D I V + G ++V SSIR P+ +G PR K+ +P
Sbjct: 359 DAINVR---LSNGQV---KKVFFSSIRPPRDQRAVVGTDGEEIVKAPPRGKNYRPLYEIP 412
Query: 357 YAREAREFLRTRLIGRQVNVQMEY 380
+ +AREFLR +LI ++V ++Y
Sbjct: 413 HMFDAREFLRKKLINKKVQCNLDY 436
Score = 205 (77.2 bits), Expect = 2.0e-79, Sum P(3) = 2.0e-79
Identities = 53/145 (36%), Positives = 78/145 (53%)
Query: 3 EVTFRVDYAVPNIGREFGTVILG-DK----NVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
EVTF D N RE+G V +G DK NV +V EG V+ +G E
Sbjct: 95 EVTFTFDKPA-NSNREYGFVWIGKDKETGENVVESIVREGLVSVRREGRPTAEQQT---- 149
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L+ LE+QA+ G G+WS AA+ +RN+ S+ N L+D G P++ I+E
Sbjct: 150 LIELEDQARAAGRGKWSPTASAAD-KVRNIK------WSHENPAHLVDIYGGNPVKAIIE 202
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGST+R +LLP+F ++ + ++G
Sbjct: 203 HVRDGSTVRAFLLPDFHYITLMISG 227
Score = 153 (58.9 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 48/175 (27%), Positives = 84/175 (48%)
Query: 542 IPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN------------ERYSNEALLL 589
+ A++E+V G + + + I SG+RCPG +++EA
Sbjct: 197 VKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFADEARYY 256
Query: 590 MRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHL 649
+ ++LQRDVEI +E+V+ + F+G++ + N+A LL GLAK + +
Sbjct: 257 VETRLLQRDVEIRLESVNNSN-FIGTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDK 315
Query: 650 LEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ 704
L AE+ AK ++L+ W++Y + A K+K+ VV E+ G V+
Sbjct: 316 LRAAERFAKEKRLRQWQDYQ-----AKTPAFNSKEKDFSGTVV-EVFNGDAINVR 364
Score = 148 (57.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 44/129 (34%), Positives = 71/129 (55%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKF-KNLIGSVFYPDGETAKDLAMELVENGLAK 254
EPF +A FT RVL R+V + ++ DK ++IG ++ G +L++ LVE GLA+
Sbjct: 587 EPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGA---NLSVALVEEGLAE 643
Query: 255 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVV--EVV 312
+ +SA E R+LK A+ +AK + +WTNYV K + ++ KVV V
Sbjct: 644 -VHFSAEKSEY--YRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKV 700
Query: 313 SGDCIIVAD 321
+ + +IV +
Sbjct: 701 NYENVIVTE 709
Score = 99 (39.9 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
Identities = 47/199 (23%), Positives = 81/199 (40%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY-PDGETAKDLAMELVENGLA 253
DEP+A +++ F +++ EV + G V+ D ET +++ +V GL
Sbjct: 76 DEPWAWESREFLRKKLIGVEVTFTFDKPANSNREYGFVWIGKDKETGENVVESIVREGLV 135
Query: 254 KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVS 313
E+ L+ A + + + N K H+ +V++
Sbjct: 136 SVRREGRPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHEN--PAHLVDIYG 193
Query: 314 GD---CII--VADDSIPYGNALAERR---VNLSSIRCPKI-----GNPRKDEKPAAYARE 360
G+ II V D S L + + +S IRCP + G P K +A E
Sbjct: 194 GNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVK-VPFADE 252
Query: 361 AREFLRTRLIGRQVNVQME 379
AR ++ TRL+ R V +++E
Sbjct: 253 ARYYVETRLLQRDVEIRLE 271
Score = 90 (36.7 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 302 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN-PRK--DE-KPAAY 357
++ +G V +V+SGD +++ G E+++ S + PK+ P DE K +
Sbjct: 23 KSLSGIVKQVLSGDTVVIRATK---GAPPPEKQITFSHVLAPKLARRPGAGGDETKDEPW 79
Query: 358 AREAREFLRTRLIGRQV 374
A E+REFLR +LIG +V
Sbjct: 80 AWESREFLRKKLIGVEV 96
Score = 84 (34.6 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 38/146 (26%), Positives = 64/146 (43%)
Query: 2 QEVTFRVDYAVP---NIGREFG-TVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
++V +DY P N ++ TV +G +NVA +V++G A + S +
Sbjct: 428 KKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQ 487
Query: 58 LLRLEEQAKLQGL-GRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIV 116
L+ E+QA ++GL G +K A + +L D S L + + IV
Sbjct: 488 LIAAEQQA-IKGLKGLHAKKDNAT-LRVNDLTV----DHSRIKVQYLPSWQRALRTEAIV 541
Query: 117 EQARDGSTLRVYLLPEFQFVQVFVAG 142
E GS LR+++ + V +AG
Sbjct: 542 EFVASGSRLRIFVPKDSCLVTFLLAG 567
Score = 76 (31.8 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 197 PFALDAKYFTEMRVLNREVRIVLEGVDKFK-NLIGSVFYPDGETAKDLAMELVENGLAKY 255
P DA+ F +++N++V+ L+ + + N Y +++A +V GLA
Sbjct: 412 PHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATC 471
Query: 256 IEWSANM-MEEDAKRRLKAAD---------LQAKKTRLRMWTNYVP-PQSNSKAIHDQNF 304
+ + + A +L AA+ L AKK + N + S K + ++
Sbjct: 472 VRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVNDLTVDHSRIKVQYLPSW 531
Query: 305 -----TGKVVE-VVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAA-- 356
T +VE V SG + + +P + L L+ I CP+ P + PA
Sbjct: 532 QRALRTEAIVEFVASGSRLRIF---VPKDSCLVT--FLLAGISCPRSSRPALNGVPAQEG 586
Query: 357 --YAREAREFLRTRLIGRQVNVQMEYSRK 383
+ EA F R R++ R V+V ++ + K
Sbjct: 587 EPFGDEALTFTRERVLQRDVSVHIDTTDK 615
Score = 42 (19.8 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPF 54
++V R++ +V N GT++ N+A ++ EG AK V + G+ K A+
Sbjct: 264 RDVEIRLE-SVNN-SNFIGTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDKLRAAER 321
Query: 55 LAELLRLEE 63
A+ RL +
Sbjct: 322 FAKEKRLRQ 330
Score = 42 (19.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 878 MVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQ 920
+++EGLA+ W + + L + AK R+ WQ
Sbjct: 293 LLREGLAKCVD---WSMAVMKTGTDKLRAAERFAKEKRLRQWQ 332
>ASPGD|ASPL0000052132 [details] [associations]
symbol:AN0242 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016788 "hydrolase activity, acting
on ester bonds" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 EMBL:BN001308 GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 EMBL:AACD01000005 eggNOG:COG1525
SUPFAM:SSF50199 HOGENOM:HOG000173592 KO:K15979 OMA:IWKDYVA
OrthoDB:EOG473T0D RefSeq:XP_657846.1 ProteinModelPortal:Q5BGT8
EnsemblFungi:CADANIAT00002482 GeneID:2876024 KEGG:ani:AN0242.2
Uniprot:Q5BGT8
Length = 882
Score = 572 (206.4 bits), Expect = 1.5e-78, Sum P(3) = 1.5e-78
Identities = 167/496 (33%), Positives = 253/496 (51%)
Query: 464 NVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLT 522
NVA +V G +VI HR D +RS YD +SSK P QD +
Sbjct: 409 NVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKPPKTKQYQDYS 468
Query: 523 MAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GRN- 579
+ ++KA+ + LQR +R+PA+V++V SG RF VL+P+E + SG+R P RN
Sbjct: 469 ES-LQKAKMEVSILQRQKRVPAIVDFVKSGSRFTVLVPRENAKLTLVLSGIRAPRSARNP 527
Query: 580 ----ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKL 635
E + NEA L ++ +QRDVEI+VET+D+ G F+G+L+ ++ N LLE GLA +
Sbjct: 528 GEASEPFGNEAHELANRRCMQRDVEIDVETIDKVGGFIGTLYVNKENFTKALLEEGLATV 587
Query: 636 QTSFGSDRIPDSHLLEQ--AEKSAKSQKLKIWENY------VEGEEVSNGAAVEG----K 683
++ +++ H E AE+ AK + +W ++ E EE ++G+AVE +
Sbjct: 588 H-AYSAEQ--SGHATEYFAAEQRAKEARKGLWHDWDPSKELEEEEEATSGSAVETEATTR 644
Query: 684 QKEVLKVVVTEI-LGGGKFYVQQVGDQKVASVQQQLA--SLNLQEAPVIGAFNPKK-GEI 739
+K+ V+VT + + +QQ+G A + A S ++ ++ P K G+
Sbjct: 645 RKDYRDVMVTYVDPTTARIKLQQIGTGTSALTELMSAFRSFHINKSNDNSLPGPPKAGDF 704
Query: 740 VLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTP 799
V A+F+ D W RA I REK ++ EV YIDYGN E++P++ LRP+ S+
Sbjct: 705 VAAKFTEDGEWYRAKIRRNDREKQQA-----EVLYIDYGNSEVLPWSALRPLSAQFSTQK 759
Query: 800 --PLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXX 857
P A L++I+ P Y EA ++ E TYN R LV D
Sbjct: 760 LRPQAVDAVLSFIQFPVNLPHYLEEAVSYIEEQTYN-----RELVANVD-------YVAP 807
Query: 858 XXXXHVTLVAVDA----EISINTLMVQEGLARVERR-KRWGSRDRQAALENLEKFQEEAK 912
HVTL+ + + SIN +V EGLA V R+ K W R L NL ++EA+
Sbjct: 808 EGTLHVTLLDPEGSKSLDQSINADIVHEGLATVPRKLKAW-ERAAGETLSNLRALEDEAR 866
Query: 913 TARIGMWQYGDIQSDD 928
+R GM +YGD+ +D
Sbjct: 867 ESRRGMHEYGDVGEED 882
Score = 168 (64.2 bits), Expect = 1.5e-78, Sum P(3) = 1.5e-78
Identities = 52/166 (31%), Positives = 93/166 (56%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EP+ +A+ F E R+L R+V++ L GV LI +V +P+G ++A L+E GLA+
Sbjct: 220 EPYGEEAQQFVESRILQRKVQVSLLGVTPQGQLIATVLHPNG----NIARYLLEAGLARC 275
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
+ + ++ + + ++ AK RL ++T V P+ + +Q++ VV V++ D
Sbjct: 276 HDHHSPLLGAEMAA-FRRSEKVAKDARLGLFTGLVAPKGPAGGATEQDYV--VVRVLNAD 332
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKP-AAYARE 360
I V + + G E++++LSSIR PK +P+ + P AA A+E
Sbjct: 333 TIFVRNKA---GQ---EKKLSLSSIRQPKPSDPK--QAPFAADAKE 370
Score = 150 (57.9 bits), Expect = 1.5e-78, Sum P(3) = 1.5e-78
Identities = 51/145 (35%), Positives = 76/145 (52%)
Query: 4 VTFRVDYAVPNIGREFGTVILGDKNVAM--LVVSEGWAKVKEQ-GSQKGEASPFLA--EL 58
V F+ Y+VP+ RE+G + L V + +VV EGW++V+E+ G + ++ LA E
Sbjct: 65 VQFQALYSVPSSQREYGKIKLPTFEVTLPEIVVQEGWSRVREEAGKRSDDSEETLAMLER 124
Query: 59 LR-LEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
LR LE+ A+ +G G W G E D N A +L+D G+ ++GIVE
Sbjct: 125 LRALEDHARTEGKGVWGSGNGRIETRY---------DLEN--AKSLVDEWSGKHLEGIVE 173
Query: 118 QARDGSTLRVYLL--PEFQFVQVFV 140
+ G L V LL PE + +QV V
Sbjct: 174 KVLTGDRLVVRLLVAPE-EHLQVIV 197
Score = 145 (56.1 bits), Expect = 3.9e-76, Sum P(3) = 3.9e-76
Identities = 45/146 (30%), Positives = 80/146 (54%)
Query: 242 DLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHD 301
++A L+E GLA+ + + ++ + + ++ AK RL ++T V P+ + +
Sbjct: 262 NIARYLLEAGLARCHDHHSPLLGAEMAA-FRRSEKVAKDARLGLFTGLVAPKGPAGGATE 320
Query: 302 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 361
Q++ VV V++ D I V + + G E++++LSSIR PK +P K A +A +A
Sbjct: 321 QDYV--VVRVLNADTIFVRNKA---GQ---EKKLSLSSIRQPKPSDP----KQAPFAADA 368
Query: 362 REFLRTRLIGRQVNVQMEYSRKVVVE 387
+EFLR R+IG+ V V + +K E
Sbjct: 369 KEFLRKRIIGKHVKVTIN-GKKPATE 393
Score = 133 (51.9 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 540 RRIPAVVEYVLSGHRF--KVLI-PKETCSIAFSFSGVRCP--------GRN---ERYSNE 585
+ + +VE VL+G R ++L+ P+E + +GVR P G+ E Y E
Sbjct: 166 KHLEGIVEKVLTGDRLVVRLLVAPEEHLQVIVVVAGVRAPATKRVGADGKEQPAEPYGEE 225
Query: 586 ALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIP 645
A + +ILQR V++ + V G + ++ N+A LLEAGLA+
Sbjct: 226 AQQFVESRILQRKVQVSLLGVTPQGQLIATVLHPNGNIARYLLEAGLARCHDHHSPLLGA 285
Query: 646 DSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ- 704
+ ++EK AK +L ++ V + + GA + VV +L +V+
Sbjct: 286 EMAAFRRSEKVAKDARLGLFTGLVAPKGPAGGATEQD-------YVVVRVLNADTIFVRN 338
Query: 705 QVGDQK---VASVQQQLASLNLQEAP 727
+ G +K ++S++Q S + ++AP
Sbjct: 339 KAGQEKKLSLSSIRQPKPS-DPKQAP 363
Score = 106 (42.4 bits), Expect = 5.7e-60, Sum P(2) = 5.7e-60
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 76
RE TVI G+ NVA+ +V G+A V + SP +L+ E +A+ G G WS
Sbjct: 398 REVATVIQGNTNVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSK 457
Query: 77 P 77
P
Sbjct: 458 P 458
Score = 105 (42.0 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 52/208 (25%), Positives = 90/208 (43%)
Query: 197 PFALDAKYFTEMRVLNREVRIVLEG----VDKFKNL-IGSVFYPDGETAKDLAMELVENG 251
PFA DAK F R++ + V++ + G + ++ + +V G T ++A+ LV+ G
Sbjct: 363 PFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEEREVATVI--QGNT--NVALALVQAG 418
Query: 252 LAKYIEWSANMMEEDA-KRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 310
A I + + L A+ +A+K MW++ PP++ + ++ +E
Sbjct: 419 YASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSK-PPKTKQYQDYSESLQKAKME 477
Query: 311 V--------VSGDCIIVADDS-----IPYGNALAERRVNLSSIRCPKIG-NPRKDEKPAA 356
V V V S +P NA + + LS IR P+ NP + +P
Sbjct: 478 VSILQRQKRVPAIVDFVKSGSRFTVLVPRENA--KLTLVLSGIRAPRSARNPGEASEP-- 533
Query: 357 YAREAREFLRTRLIGRQVNVQMEYSRKV 384
+ EA E R + R V + +E KV
Sbjct: 534 FGNEAHELANRRCMQRDVEIDVETIDKV 561
Score = 99 (39.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF +A R + R+V I +E +DK IG+++ ++ L+E GLA
Sbjct: 532 EPFGNEAHELANRRCMQRDVEIDVETIDKVGGFIGTLYV----NKENFTKALLEEGLATV 587
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 310
+SA + AA+ +AK+ R +W ++ P + + ++ +G VE
Sbjct: 588 HAYSAE--QSGHATEYFAAEQRAKEARKGLWHDWDPSKELEE--EEEATSGSAVE 638
Score = 98 (39.6 bits), Expect = 3.9e-59, Sum P(2) = 3.9e-59
Identities = 47/206 (22%), Positives = 96/206 (46%)
Query: 195 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 253
DEP+A ++ F ++ + V+ L V + G + P E L +V+ G +
Sbjct: 45 DEPYAFQSREFLRELLVGKVVQFQALYSVPSSQREYGKIKLPTFEVT--LPEIVVQEGWS 102
Query: 254 KYIEWSANMMEEDAK-----RRLKAADLQAKKTRLRMW--------TNYVPPQSNSKAIH 300
+ E + ++ + RL+A + A+ +W T Y N+K++
Sbjct: 103 RVREEAGKRSDDSEETLAMLERLRALEDHARTEGKGVWGSGNGRIETRY--DLENAKSLV 160
Query: 301 DQNFTGK----VVE-VVSGDCIIVADDSIPYGNALAERRVNLSSIRCP---KIGNPRKDE 352
D+ ++GK +VE V++GD ++V P + + V ++ +R P ++G K++
Sbjct: 161 DE-WSGKHLEGIVEKVLTGDRLVVRLLVAPEEHL--QVIVVVAGVRAPATKRVGADGKEQ 217
Query: 353 KPAAYAREAREFLRTRLIGRQVNVQM 378
Y EA++F+ +R++ R+V V +
Sbjct: 218 PAEPYGEEAQQFVESRILQRKVQVSL 243
Score = 93 (37.8 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 307 KVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLR 366
+V V+SGD ++++ N ER ++L+ + P++ R+ ++P YA ++REFLR
Sbjct: 6 RVKSVLSGDTVVLSH----VHNPAQERVLSLAYVSAPRLR--REGDEP--YAFQSREFLR 57
Query: 367 TRLIGRQVNVQMEYS 381
L+G+ V Q YS
Sbjct: 58 ELLVGKVVQFQALYS 72
Score = 78 (32.5 bits), Expect = 3.5e-23, Sum P(4) = 3.5e-23
Identities = 37/157 (23%), Positives = 74/157 (47%)
Query: 569 SFSGVRCPGRNER----YSNEALLLMRQKILQRDVEIEVE-----TVDRTGTFLGSLWES 619
S S +R P ++ ++ +A +R++I+ + V++ + T + ++ +
Sbjct: 347 SLSSIRQPKPSDPKQAPFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEEREVATVIQG 406
Query: 620 RTNVAVILLEAGLAKL--QTSFGSDRIP--DSHLLEQAEK--------SAKSQKLKIWEN 667
TNVA+ L++AG A + SDR P D ++ +AE S+K K K +++
Sbjct: 407 NTNVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKPPKTKQYQD 466
Query: 668 YVEG-EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYV 703
Y E ++ ++ +QK V +V + G +F V
Sbjct: 467 YSESLQKAKMEVSILQRQKRV-PAIVDFVKSGSRFTV 502
Score = 54 (24.1 bits), Expect = 3.5e-23, Sum P(4) = 3.5e-23
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 878 MVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGD----IQSDDEDPLP 933
+++EGLA V + + A E ++ AK AR G+W D ++ ++E
Sbjct: 579 LLEEGLATVHA---YSAEQSGHATEYFAA-EQRAKEARKGLWHDWDPSKELEEEEEATSG 634
Query: 934 SAVRKVAGGRR 944
SAV A RR
Sbjct: 635 SAVETEATTRR 645
>DICTYBASE|DDB_G0279659 [details] [associations]
symbol:snd1 "Staphylococcus nuclease (SNase-like)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 dictyBase:DDB_G0279659
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 PROSITE:PS50304
EMBL:AAFI02000032 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
KO:K15979 RefSeq:XP_641583.1 ProteinModelPortal:Q54WH0
EnsemblProtists:DDB0231754 GeneID:8622157 KEGG:ddi:DDB_G0279659
InParanoid:Q54WH0 OMA:RFYVQTV ProtClustDB:CLSZ2497222
Uniprot:Q54WH0
Length = 921
Score = 441 (160.3 bits), Expect = 1.6e-77, Sum P(4) = 1.6e-77
Identities = 135/406 (33%), Positives = 204/406 (50%)
Query: 450 AVAQSNAAGQP-----AGV-NVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXX 503
A+A SN +P G NV+ +V GL + H+ + R+ Y+
Sbjct: 432 AIASSNLPEKPYYSVFLGKGNVSLGLVEAGLARLTEHKGADNRAIDYEALITAENKAKKK 491
Query: 504 XXXCYSSKEP-PVMHIQDLTMAP--VK-KARDFLPFLQRSRRIPAVVEYVLSGHRFKVLI 559
YS+K+ P ++ D++ +K KA+ LP + R +PAVV+YV S R K+ I
Sbjct: 492 HSGLYSNKDSAPSFNVNDVSSEDKNLKAKAQKLLPHI-RGIVLPAVVDYVFSAQRVKLFI 550
Query: 560 PKETCSIAFSFSGVRCPGR--NERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 617
KE+C I F+ SGVR P R NE SN+AL R+ + Q DV I++E +D+ G F+G+L
Sbjct: 551 EKESCMINFTMSGVRAPRRDENEELSNQALGFSREHLHQHDVHIQIEDIDKGGNFIGTLM 610
Query: 618 ESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEE--VS 675
N A+ L+E G A + +R+ D E AE AKS +L +W+NY EE V+
Sbjct: 611 VGNKNFALSLVEMGFASIYDPM--NRLNDYQRFEDAENKAKSSRLNLWKNYDPEEEQRVA 668
Query: 676 NG-AAVEGKQKEVLKVVVTE-----ILGGGKFYVQQVGDQKVASVQQQLASLNLQ-EAPV 728
N AA E ++K+ K E ++ + Y+Q + K ++ QLASL + E
Sbjct: 669 NQKAAAEEERKQQQKAETGEAYIRAVVSPTEVYLQ-FANNKTKDIESQLASLEINNEDST 727
Query: 729 IGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVND-KFEVFYIDYGNQELVPYNK 787
I A PK G+IV + D W+R+ K+ S+ D K V ID G +E P ++
Sbjct: 728 IVAM-PKVGDIVKFKSQHDKKWHRS--------KITSIADGKINVNLIDLGERESFPQSQ 778
Query: 788 ----LRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNE 829
+R I+ L S P L L LA K P+ +D Y +A +F+ +
Sbjct: 779 SSTLIRNINHKLQSLPSLVTLVKLASCKNPSNDDIYN-DAMDFMEK 823
Score = 240 (89.5 bits), Expect = 1.6e-77, Sum P(4) = 1.6e-77
Identities = 66/201 (32%), Positives = 107/201 (53%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFAL+A+ F +L+R+V++ L+ DK NL G++ D +D+A EL++NGL Y
Sbjct: 239 EPFALEAESFISKNLLHRDVQLTLDTFDKQGNLFGTIKCAD----RDVACELLKNGLGTY 294
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGK---VVEVV 312
+ WS + LK A+ AK +R+W Y P S+S + + + + +
Sbjct: 295 VPWSGATRSAPDQMLLKQAEETAKGQGIRVW--YQSPSSSSTSSSSSSSSSSNEPYPKEI 352
Query: 313 SGDCIIVADDS---IPYGNALAERRVNLSSIRCPKIGNP-RKDEKPAA----YAREAREF 364
G I + ++ I N E +V L+SIR P P K++K + YA EA+E+
Sbjct: 353 DGKVIDIGNNGTVGILSENDRKEYKVTLASIRVPNFTKPSEKEDKDSKFERYYAYEAKEW 412
Query: 365 LRTRLIGRQVNVQMEYSRKVV 385
LR RLIG++V ++E+ R +
Sbjct: 413 LRKRLIGQKVIAKLEFIRPAI 433
Score = 177 (67.4 bits), Expect = 2.6e-21, Sum P(4) = 2.6e-21
Identities = 59/217 (27%), Positives = 103/217 (47%)
Query: 522 TMAPVKKARDFLPFLQ-RSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG--- 577
++ P+ F F + + +++ AVVE V + ++V I + SGV+CPG
Sbjct: 171 SIRPIHTINSFDLFNKLKGKQLTAVVEQVRNAASYRVTITPSFHTFLIQLSGVQCPGYKK 230
Query: 578 --RN----ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAG 631
N E ++ EA + + +L RDV++ ++T D+ G G++ + +VA LL+ G
Sbjct: 231 DNNNQMQPEPFALEAESFISKNLLHRDVQLTLDTFDKQGNLFGTIKCADRDVACELLKNG 290
Query: 632 LAKLQTSFGSDR-IPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL-K 689
L G+ R PD LL+QAE++AK Q +++W S+ ++ E K
Sbjct: 291 LGTYVPWSGATRSAPDQMLLKQAEETAKGQGIRVWYQSPSSSSTSSSSSSSSSSNEPYPK 350
Query: 690 VV---VTEILGGGKFYVQQVGDQKVASVQQQLASLNL 723
+ V +I G + D+K V LAS+ +
Sbjct: 351 EIDGKVIDIGNNGTVGILSENDRKEYKVT--LASIRV 385
Score = 141 (54.7 bits), Expect = 1.6e-77, Sum P(4) = 1.6e-77
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD---KNVAMLVVSEGWAKVKEQGSQKGEASPFLAEL 58
++V F DY P G++F +V L D ++ ++ EGWA + + K P L
Sbjct: 88 KKVQFFTDYTAPT-GKKFISVYLYDDLENSLNKQMIEEGWASLYRSTTGKENKKPEYLNL 146
Query: 59 LRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQ 118
++LE +A + LG +K P A SIR P I FN + KG+ + +VEQ
Sbjct: 147 IQLESEAISKELGIHNKNPIAITNSIR--PIHTINSFDLFNKL------KGKQLTAVVEQ 198
Query: 119 ARDGSTLRVYLLPEFQFVQVFVAG 142
R+ ++ RV + P F + ++G
Sbjct: 199 VRNAASYRVTITPSFHTFLIQLSG 222
Score = 127 (49.8 bits), Expect = 1.6e-77, Sum P(4) = 1.6e-77
Identities = 37/116 (31%), Positives = 60/116 (51%)
Query: 828 NEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVE 887
N+ YN + +F E D HV L++ +A I IN +V+ GL V+
Sbjct: 810 NDDIYNDAMDFMEK-EFLDLKVGVNIIRDIDGTQHV-LLSDNAGI-INGELVRNGLVSVD 866
Query: 888 RRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDEDPLPSAVRKVAGGR 943
R + S ++ L+ +++AK+ R+G+W++GDI SDDED P + K GG+
Sbjct: 867 RSTKLPS------IQQLQDEEQKAKSKRLGVWRFGDIDSDDEDDKPRSNFKGKGGK 916
Score = 107 (42.7 bits), Expect = 9.7e-20, Sum P(3) = 9.7e-20
Identities = 32/112 (28%), Positives = 57/112 (50%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
+E + A F+ + +V I +E +DK N IG++ + K+ A+ LVE G A
Sbjct: 572 NEELSNQALGFSREHLHQHDVHIQIEDIDKGGNFIGTLMVGN----KNFALSLVEMGFAS 627
Query: 255 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQ----SNSKAIHDQ 302
+ N + + +R + A+ +AK +RL +W NY P + +N KA ++
Sbjct: 628 IYD-PMNRLND--YQRFEDAENKAKSSRLNLWKNYDPEEEQRVANQKAAAEE 676
Score = 88 (36.0 bits), Expect = 3.9e-51, Sum P(3) = 3.9e-51
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 293 QSN--SKAIHDQNFTGKVVEVV-SGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPR 349
QSN I Q T VV V SGD +++ D + ++ + +LS + P++G
Sbjct: 5 QSNVPQSQIQPQVPTIGVVRAVNSGDSLVIQD--LKTADS-PKVEYSLSHLTVPRLGYHG 61
Query: 350 KDEKPAA----YAREAREFLRTRLIGRQVNVQMEYS 381
++KP +A E+REFLR++ IG++V +Y+
Sbjct: 62 SNDKPPTKDLPFAWESREFLRSKCIGKKVQFFTDYT 97
Score = 80 (33.2 bits), Expect = 2.7e-50, Sum P(3) = 2.7e-50
Identities = 42/197 (21%), Positives = 77/197 (39%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLE-GVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 253
D PFA +++ F + + ++V+ + K I Y D E + L +++E G A
Sbjct: 70 DLPFAWESREFLRSKCIGKKVQFFTDYTAPTGKKFISVYLYDDLENS--LNKQMIEEGWA 127
Query: 254 KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS--NS-KAIHDQN----FT- 305
S E L L+++ + + P + NS + IH N F
Sbjct: 128 SLYR-STTGKENKKPEYLNLIQLESEAISKELGIHNKNPIAITNSIRPIHTINSFDLFNK 186
Query: 306 --GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDE-KPAAYAREAR 362
GK + V A + + + LS ++CP ++ +P +A EA
Sbjct: 187 LKGKQLTAVVEQVRNAASYRVTITPSFHTFLIQLSGVQCPGYKKDNNNQMQPEPFALEAE 246
Query: 363 EFLRTRLIGRQVNVQME 379
F+ L+ R V + ++
Sbjct: 247 SFISKNLLHRDVQLTLD 263
Score = 74 (31.1 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 30/147 (20%), Positives = 66/147 (44%)
Query: 2 QEVTFRVDYAVPNIG------REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFL 55
Q+V ++++ P I + + +V LG NV++ +V G A++ E A +
Sbjct: 420 QKVIAKLEFIRPAIASSNLPEKPYYSVFLGKGNVSLGLVEAGLARLTEHKGADNRAIDYE 479
Query: 56 AELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGI 115
A L+ E +AK + G +S A ++ ++ S+ + A LL +G + +
Sbjct: 480 A-LITAENKAKKKHSGLYSNKDSAPSFNVNDV--SSEDKNLKAKAQKLLPHIRGIVLPAV 536
Query: 116 VEQARDGSTLRVYLLPEFQFVQVFVAG 142
V+ +++++ E + ++G
Sbjct: 537 VDYVFSAQRVKLFIEKESCMINFTMSG 563
Score = 71 (30.1 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 16 GREFGTVILGDKNVAMLVVSEGWAK-VKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWS 74
G FGT+ D++VA ++ G V G+ + L L + EE AK QG+ W
Sbjct: 269 GNLFGTIKCADRDVACELLKNGLGTYVPWSGATRSAPDQML--LKQAEETAKGQGIRVWY 326
Query: 75 KVPGAAEAS 83
+ P ++ S
Sbjct: 327 QSPSSSSTS 335
Score = 69 (29.3 bits), Expect = 5.1e-28, Sum P(3) = 5.1e-28
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 576 PGRNERYSNEALLLMRQKILQRDVEIEVETV-DRTGTFLGSLWESRTNVAVILLEAGLAK 634
P ++ Y N+A+ M ++ L D+++ V + D GT L ++ + L+ GL
Sbjct: 808 PSNDDIY-NDAMDFMEKEFL--DLKVGVNIIRDIDGTQHVLLSDNAGIINGELVRNGLVS 864
Query: 635 LQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 665
+ S ++P L+ E+ AKS++L +W
Sbjct: 865 VDRS---TKLPSIQQLQDEEQKAKSKRLGVW 892
Score = 69 (29.3 bits), Expect = 7.6e-16, Sum P(3) = 7.6e-16
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 198 FALDAKYFTEMRVLNREVRIVLEGVDKF---KNLIGSVFYPDGETAKDLAMELVENGLAK 254
+A +AK + R++ ++V LE + NL +Y ++++ LVE GLA+
Sbjct: 405 YAYEAKEWLRKRLIGQKVIAKLEFIRPAIASSNLPEKPYYSVFLGKGNVSLGLVEAGLAR 464
Query: 255 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS---NSKAIHDQNFTGKVVEV 311
E L A+ +AKK +++N S N + D+N K ++
Sbjct: 465 LTEHKGADNRAIDYEALITAENKAKKKHSGLYSNKDSAPSFNVNDVSSEDKNLKAKAQKL 524
Query: 312 VSGDCIIVADDSIPYGNALAERRVNLSSIRC------PKIGNPRKDEKPAAYAREAREFL 365
+ IV + Y + ++ + C + PR+DE + +A F
Sbjct: 525 LPHIRGIVLPAVVDYVFSAQRVKLFIEKESCMINFTMSGVRAPRRDENEEL-SNQALGFS 583
Query: 366 RTRLIGRQVNVQME 379
R L V++Q+E
Sbjct: 584 REHLHQHDVHIQIE 597
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 16 GREFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSK 75
G GT+++G+KN A+ +V G+A + + ++ + F E E +AK L W
Sbjct: 603 GNFIGTLMVGNKNFALSLVEMGFASIYDPMNRLNDYQRF--E--DAENKAKSSRLNLWKN 658
Query: 76 VPGAAEASIRNLPPSA 91
E + N +A
Sbjct: 659 YDPEEEQRVANQKAAA 674
Score = 53 (23.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 201 DAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSA 260
DA F E L+ +V GV+ +++ G+ + A + ELV NGL ++ S
Sbjct: 816 DAMDFMEKEFLDLKV-----GVNIIRDIDGTQHVLLSDNAGIINGELVRNGLVS-VDRST 869
Query: 261 NMMEEDAKRRLKAADLQAKKTRLRMW 286
+ + ++L+ + +AK RL +W
Sbjct: 870 KL---PSIQQLQDEEQKAKSKRLGVW 892
Score = 44 (20.5 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 862 HVTLVAVDAEIS-INTLMVQE---GLARVER--RKRWGSRDRQAALENLEKFQEEAKTAR 915
H+ + +D + I TLMV L+ VE + +R + E + +AK++R
Sbjct: 593 HIQIEDIDKGGNFIGTLMVGNKNFALSLVEMGFASIYDPMNRLNDYQRFEDAENKAKSSR 652
Query: 916 IGMWQYGDIQSD 927
+ +W+ D + +
Sbjct: 653 LNLWKNYDPEEE 664
Score = 40 (19.1 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 710 KVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSA 746
K+ ++ +AS NL E P F K G + L A
Sbjct: 425 KLEFIRPAIASSNLPEKPYYSVFLGK-GNVSLGLVEA 460
>UNIPROTKB|G5EHM8 [details] [associations]
symbol:MGCH7_ch7g348 "Nuclease domain-containing protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:CM000230 EMBL:CM001237 Gene3D:2.40.50.90
SUPFAM:SSF50199 KO:K15979 RefSeq:XP_003721166.1
ProteinModelPortal:G5EHM8 EnsemblFungi:MGG_12646T0 GeneID:5050519
KEGG:mgr:MGG_12646 Uniprot:G5EHM8
Length = 894
Score = 546 (197.3 bits), Expect = 9.7e-74, Sum P(3) = 9.7e-74
Identities = 162/521 (31%), Positives = 261/521 (50%)
Query: 442 KGEGD-DASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXX 499
+ EGD +A VA AG+ N+ ++V G +VI HR D +R+ YD
Sbjct: 388 EAEGDFEAKEVATVTQAGK----NIGLILVQEGYASVIRHRKDDTDRAPNYDELLAAQEQ 443
Query: 500 XXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLI 559
+S K P + D + + +++A+ L LQR +++PA+V++ SG RF +LI
Sbjct: 444 AKTDGKGMWSGKAPKIKQFTDASES-LQRAKIQLSVLQRQKKVPAIVDFCKSGSRFTILI 502
Query: 560 PKETCSIAFSFSGVRCP---GRN------ERYSNEALLLMRQKILQRDVEIEVETVDRTG 610
P+E+ + G+R P GRN E + EAL L ++ QRDVE++V +D+ G
Sbjct: 503 PRESVKLTLVLGGIRAPRAPGRNPQTDKGEPFGQEALDLANKRCNQRDVEVDVLDLDKVG 562
Query: 611 TFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYV- 669
F+G L+ R + A IL+E GLA + + +++ ++ L AEK AK + +W ++
Sbjct: 563 GFIGDLYVGRESFAKILVEEGLASVH-QYSAEKSGNATELNAAEKRAKEARKGMWHDWTP 621
Query: 670 -EGEEVSNG----AAVEG-----KQKEVLKVVVTEILGGGKFYVQQVGDQKVA--SVQQQ 717
+ +E G AAVE K ++ +VVT I G+ +Q+VG A ++ +
Sbjct: 622 SDDDEEDAGEQAAAAVESINIDKKPQDYRDIVVTNIEPNGRLKIQEVGKGTAALETMMTE 681
Query: 718 LASLNLQEAPVI--GAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYI 775
+ A + G NPK GE V A+FSAD W R I + R + EV YI
Sbjct: 682 FKKFHNNPANNVSGGLTNPKAGEYVAAKFSADGQWYRGRIRSNDRAAKMA-----EVVYI 736
Query: 776 DYGNQELVPYNKLRPID-PSLSSTPPLAQL--CSLAYIKIPALEDEYGPEAAEFLNEHTY 832
D+GN E P++KLRP+D P + AQ SL+++++P +Y EA + E T
Sbjct: 737 DFGNHEKQPWSKLRPLDQPQFTVQKLKAQATDASLSFVELPVNHPDYMNEALNAMAEMT- 795
Query: 833 NSSNEFRAL---VEERDSSXXXXXXXXXXXXXHVTLVAVDAEISINTLMVQEGLARVERR 889
+ AL V+ +D + + A+ S+N +V G A V R+
Sbjct: 796 -EGRQLVALYDFVDSKDGNLAYITIFDPKAGGSGGSGST-AKDSLNREIVANGYAMVPRK 853
Query: 890 -KRWG-SRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDD 928
K W S+ +A L++L++ + +AK R+GMW+YGDI ++
Sbjct: 854 LKPWERSKVFEATLKSLKEVESQAKQDRLGMWEYGDISFEE 894
Score = 177 (67.4 bits), Expect = 9.7e-74, Sum P(3) = 9.7e-74
Identities = 50/153 (32%), Positives = 81/153 (52%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
E + +AK F E R+L R+++I + G +L+ S+ +P G ++A L+E GLA+
Sbjct: 220 EEYGNEAKAFVETRLLQRKIKIDIVGASPQGHLVASLIHPRG----NIAEFLLEEGLARC 275
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++ + M+ E R L+AA+ +A+ RLR+ N + HD V +++ D
Sbjct: 276 NDFHSTMLGEKMAR-LRAAEKKAQDGRLRLHKNRAVKAAGEGGSHDMT----VAKIIGAD 330
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKIGNP 348
IIV S G AERR+N SS+R P+ P
Sbjct: 331 SIIVRSKS---G---AERRINFSSVRGPRTAEP 357
Score = 169 (64.5 bits), Expect = 6.7e-73, Sum P(3) = 6.7e-73
Identities = 48/138 (34%), Positives = 75/138 (54%)
Query: 242 DLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHD 301
++A L+E GLA+ ++ + M+ E R L+AA+ +A+ RLR+ N + HD
Sbjct: 262 NIAEFLLEEGLARCNDFHSTMLGEKMAR-LRAAEKKAQDGRLRLHKNRAVKAAGEGGSHD 320
Query: 302 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 361
V +++ D IIV S G AERR+N SS+R P+ P E P + EA
Sbjct: 321 MT----VAKIIGADSIIVRSKS---G---AERRINFSSVRGPRTAEP--SEAP--FREEA 366
Query: 362 REFLRTRLIGRQVNVQME 379
+EFLR +LIG+ V + ++
Sbjct: 367 KEFLRKKLIGKHVQITID 384
Score = 154 (59.3 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 538 RSRRIPAVVEYVLSGHRFKV---LIPKETCSIAFSFSGVRCP-----GRN------ERYS 583
+ + + V+E VLSG R V L K+ C + +G+R P G+N E Y
Sbjct: 164 KGKTVDGVIERVLSGDRLLVRLLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEEYG 223
Query: 584 NEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDR 643
NEA + ++LQR ++I++ G + SL R N+A LLE GLA+ F S
Sbjct: 224 NEAKAFVETRLLQRKIKIDIVGASPQGHLVASLIHPRGNIAEFLLEEGLARCN-DFHSTM 282
Query: 644 IPDSHL-LEQAEKSAKSQKLKIWEN 667
+ + L AEK A+ +L++ +N
Sbjct: 283 LGEKMARLRAAEKKAQDGRLRLHKN 307
Score = 130 (50.8 bits), Expect = 9.7e-74, Sum P(3) = 9.7e-74
Identities = 47/173 (27%), Positives = 73/173 (42%)
Query: 4 VTFRVDYAVPNIGREFGTVIL-GDKNVAMLVVSEGWAKVKEQGSQKGEASPFLA--ELLR 60
V ++ Y +P GRE+G+ I+ + +V GWAKV+E +K E L E+LR
Sbjct: 68 VQCKILYTIPGSGREYGSAIVKAGPELPDALVKAGWAKVREDAGKKEEDEEVLQRLEVLR 127
Query: 61 -LEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQA 119
LE +A+ G G W+ G E ++N + + KG+ + G++E+
Sbjct: 128 QLENEARSDGRGLWAGTGGHIE--VQN----------DLGGPEFMKEWKGKTVDGVIERV 175
Query: 120 RDGSTLRV-YLLPEFQFVQVF--VAGXXXXXXXXXXXXXXDTDTEETNGDVSA 169
G L V LL + + QV VAG EE + A
Sbjct: 176 LSGDRLLVRLLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEEYGNEAKA 228
Score = 108 (43.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 17 REFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWS-K 75
+E TV KN+ +++V EG+A V + +P ELL +EQAK G G WS K
Sbjct: 396 KEVATVTQAGKNIGLILVQEGYASVIRHRKDDTDRAPNYDELLAAQEQAKTDGKGMWSGK 455
Query: 76 VP 77
P
Sbjct: 456 AP 457
Score = 104 (41.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPF +A R R+V + + +DK IG ++ G + A LVE GLA
Sbjct: 532 EPFGQEALDLANKRCNQRDVEVDVLDLDKVGGFIGDLYV--GR--ESFAKILVEEGLASV 587
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++SA + L AA+ +AK+ R MW ++ P + + +Q VE ++ D
Sbjct: 588 HQYSAE--KSGNATELNAAEKRAKEARKGMWHDWTPSDDDEEDAGEQ--AAAAVESINID 643
Score = 88 (36.0 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 302 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 361
+ F V ++SGD ++++ + P N ER +L+ + P++ N DE A+A ++
Sbjct: 4 KTFIAVVKSILSGDTLVLSSPNNP--NL--ERTFSLAFVSAPRL-NKDGDE---AFAFQS 55
Query: 362 REFLRTRLIGRQVNVQMEYS 381
REFLR IG+ V ++ Y+
Sbjct: 56 REFLRESCIGKPVQCKILYT 75
Score = 83 (34.3 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 237 GETAKD-LAMELVENGLA----KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 286
G TAKD L E+V NG A K W + + E + LK + QAK+ RL MW
Sbjct: 831 GSTAKDSLNREIVANGYAMVPRKLKPWERSKVFEATLKSLKEVESQAKQDRLGMW 885
Score = 78 (32.5 bits), Expect = 1.0e-23, Sum P(4) = 1.0e-23
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 569 SFSGVRCPGRNER----YSNEALLLMRQKILQRDVEIEVE-TVDRTGTF----LGSLWES 619
+FS VR P E + EA +R+K++ + V+I ++ + G F + ++ ++
Sbjct: 345 NFSSVRGPRTAEPSEAPFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQA 404
Query: 620 RTNVAVILLEAGLAKL--QTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 665
N+ +IL++ G A + +DR P+ L A++ AK+ +W
Sbjct: 405 GKNIGLILVQEGYASVIRHRKDDTDRAPNYDELLAAQEQAKTDGKGMW 452
Score = 76 (31.8 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 45/202 (22%), Positives = 82/202 (40%)
Query: 195 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 253
DE FA ++ F + + V+ +L + GS G D LV+ G A
Sbjct: 48 DEAFAFQSREFLRESCIGKPVQCKILYTIPGSGREYGSAIVKAGPELPDA---LVKAGWA 104
Query: 254 KYIEWSANMMEEDAK--RRLKAA---DLQAKKTRLRMWTN---YVPPQSN------SKAI 299
K E A EED + +RL+ + +A+ +W ++ Q++ K
Sbjct: 105 KVRE-DAGKKEEDEEVLQRLEVLRQLENEARSDGRGLWAGTGGHIEVQNDLGGPEFMKEW 163
Query: 300 HDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP---KIGNPRKDEKPAA 356
+ G + V+SGD ++V + + ++ IR P + G +
Sbjct: 164 KGKTVDGVIERVLSGDRLLVR--LLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEE 221
Query: 357 YAREAREFLRTRLIGRQVNVQM 378
Y EA+ F+ TRL+ R++ + +
Sbjct: 222 YGNEAKAFVETRLLQRKIKIDI 243
Score = 71 (30.1 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFK-NLIGSVFYPDGETAKDLAMELVENGLA 253
+ PF +AK F +++ + V+I ++G + + + + K++ + LV+ G A
Sbjct: 359 EAPFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQAGKNIGLILVQEGYA 418
Query: 254 KYIEWSANMMEEDAKR-RLKAADLQAKKTRLRMWTNYVP 291
I + + L AA QAK MW+ P
Sbjct: 419 SVIRHRKDDTDRAPNYDELLAAQEQAKTDGKGMWSGKAP 457
Score = 70 (29.7 bits), Expect = 1.0e-23, Sum P(4) = 1.0e-23
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 873 SINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDED 930
S ++V+EGLA V + S ++ L ++ AK AR GMW DDE+
Sbjct: 574 SFAKILVEEGLASVHQY----SAEKSGNATELNAAEKRAKEARKGMWHDWTPSDDDEE 627
>WB|WBGene00006626 [details] [associations]
symbol:tsn-1 species:6239 "Caenorhabditis elegans"
[GO:0016442 "RNA-induced silencing complex" evidence=IEA;IPI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0035195 "gene silencing
by miRNA" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005829 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0000003 GO:GO:0003676 GO:GO:0016788 GO:GO:0016442
GO:GO:0035195 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
EMBL:FO081114 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 HOGENOM:HOG000173592 KO:K15979
OMA:IWKDYVA PIR:B88131 RefSeq:NP_494839.1 HSSP:P00644
ProteinModelPortal:Q19328 SMR:Q19328 STRING:Q19328 PaxDb:Q19328
EnsemblMetazoa:F10G7.2.1 EnsemblMetazoa:F10G7.2.2 GeneID:173811
KEGG:cel:CELE_F10G7.2 UCSC:F10G7.2.1 CTD:173811 WormBase:F10G7.2
InParanoid:Q19328 NextBio:881213 Uniprot:Q19328
Length = 914
Score = 345 (126.5 bits), Expect = 4.2e-66, Sum P(3) = 4.2e-66
Identities = 134/499 (26%), Positives = 225/499 (45%)
Query: 464 NVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSK--EPPVMH-IQ 519
N+AE ++SRGL V+ HR D E RS+ YD ++ K E H IQ
Sbjct: 445 NIAEGLISRGLSKVVRHRADDENRSSEYDTLLAAEANAEKGKKGLFADKTAEKKDTHRIQ 504
Query: 520 DLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--- 576
++T + KA+ FLP+LQR R VVE++ G R ++ IPKET I F G+ CP
Sbjct: 505 EIT-GDLAKAKQFLPYLQRGGRAEGVVEFLSGGSRLRIYIPKETVLITFLLGGINCPKGA 563
Query: 577 ---------GRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWES---RTNVA 624
G E +++EA R+ +LQ +V++EVE+ D+ G F+G L+ S T+ A
Sbjct: 564 RVGPGGVSTGAAEPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRA 623
Query: 625 VILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAA-VEGK 683
+ L EA ++ S H AE+S L EN + + + A E +
Sbjct: 624 INLSEA---LVENGLAS-----LHFT--AERSGHYNALLSAENKAKKAKKNIWANFTEEQ 673
Query: 684 QKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQ 743
+E ++V + K +QV +A + ++ N+++ P I + + LA+
Sbjct: 674 HQEEVEVQQADT-SERKQNFRQVAVTDIAPGALRFSAQNIEDGPKIEKMTTEMRQ-ALAE 731
Query: 744 ---FSADNSWNRAMIVNAP--------REKVESVN-DKFEVFYIDYGNQELVPYNKLRPI 791
+ + R + A R KVESV + E+ YIDYGN+E + KL I
Sbjct: 732 HPPLAGSYTTKRGDLCVAKFSQDGQWYRCKVESVRAGQAEIVYIDYGNRETIEAVKLAQI 791
Query: 792 DPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXX 851
++ P + +LA K+P ++Y ++ ++ + S+ F
Sbjct: 792 PAGFANFPAGVREYNLALAKLP--NEDYVQLTSDAFAQYLFGHSSVF------------I 837
Query: 852 XXXXXXXXXXHVTLV--AVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQE 909
+VT+ + + ++ I ++ EGLA + R+ R Q + + +E
Sbjct: 838 NSEYKVGTSEYVTVYYDSGNKKVDIGKSLIAEGLALADHRRE--PR-LQTLVNDYNTTEE 894
Query: 910 EAKTARIGMWQYGDIQSDD 928
A+ +R +W+YGD +D
Sbjct: 895 VARKSRKNIWEYGDFTGND 913
Score = 297 (109.6 bits), Expect = 4.2e-66, Sum P(3) = 4.2e-66
Identities = 73/195 (37%), Positives = 117/195 (60%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
E F+ +AK+F E R+L R+V+I+LE +N +GS+ +P G A+ L E G AK
Sbjct: 242 EAFSEEAKFFAESRLLQRDVQIILESTSN-QNFVGSIVHPKGNIAESLLRE----GYAKC 296
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+ A+ QAK+ RLR+W +Y P S++ + + FTGKVVE+V D
Sbjct: 297 VDWSIGLCTGGAQK-LRDAERQAKEKRLRLWKSY-QPTSSAYSGDRKAFTGKVVEIVLSD 354
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPK-------IGNPRKDEKPA---AYAREAREFL 365
++V D G+ E +++LSSIR P+ G P + +P + +AREFL
Sbjct: 355 AVVVQKDD---GS---EVKLHLSSIRLPRESGDDKATGGPGRQFRPLYDIPFMFQAREFL 408
Query: 366 RTRLIGRQVNVQMEY 380
R RL+G++V +Q++Y
Sbjct: 409 RKRLLGKKVQIQIDY 423
Score = 166 (63.5 bits), Expect = 4.2e-66, Sum P(3) = 4.2e-66
Identities = 51/147 (34%), Positives = 79/147 (53%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD------KNVAMLVVSEGWAKVKEQGSQKGEASPFL 55
Q VTF D+ + GR+ G + LG +NVA VS G +V+ QG E S
Sbjct: 94 QFVTFVRDFTATS-GRDHGRIYLGGTSPADAENVAEGAVSAGLLEVR-QGKVADEYS--- 148
Query: 56 AELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGI 115
+LL L+EQAK G G+W+ G +IR++ + D N L+D +P+ +
Sbjct: 149 TKLLELQEQAKSAGRGKWNSNAG----TIRDI--RWVID----NPRELVDKYAQKPIDAV 198
Query: 116 VEQARDGSTLRVYLLPEFQFVQVFVAG 142
+E RDGST+R +LLP F+++ + ++G
Sbjct: 199 IEMVRDGSTVRAFLLPNFEYITLQLSG 225
Score = 156 (60.0 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 50/159 (31%), Positives = 75/159 (47%)
Query: 542 IPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG-RN--------ERYSNEALLLMRQ 592
I AV+E V G + + I SGVR P RN E +S EA
Sbjct: 195 IDAVIEMVRDGSTVRAFLLPNFEYITLQLSGVRAPSTRNPNAADSRAEAFSEEAKFFAES 254
Query: 593 KILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAK-LQTSFGSDRIPDSHLLE 651
++LQRDV+I +E+ F+GS+ + N+A LL G AK + S G + L
Sbjct: 255 RLLQRDVQIILESTSNQN-FVGSIVHPKGNIAESLLREGYAKCVDWSIGLCT-GGAQKLR 312
Query: 652 QAEKSAKSQKLKIWENYVEGEEVSNG--AAVEGKQKEVL 688
AE+ AK ++L++W++Y +G A GK E++
Sbjct: 313 DAERQAKEKRLRLWKSYQPTSSAYSGDRKAFTGKVVEIV 351
Score = 145 (56.1 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 37/101 (36%), Positives = 57/101 (56%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY-PDGETAK--DLAMELVENGL 252
EPFA +A FT VL EV++ +E DK N +G ++ PDG T++ +L+ LVENGL
Sbjct: 576 EPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRAINLSEALVENGL 635
Query: 253 AKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQ 293
A + ++A L +A+ +AKK + +W N+ Q
Sbjct: 636 AS-LHFTAE--RSGHYNALLSAENKAKKAKKNIWANFTEEQ 673
Score = 105 (42.0 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 53/214 (24%), Positives = 89/214 (41%)
Query: 178 SAQRLXXXXXXXXXXXXDEPFALDAKYFTEMRVLNREVRIVLE-----GVDKFKNLIGSV 232
+A RL DEP+A D++ + +++ + V V + G D + +G
Sbjct: 59 TAPRLGRRPTDSASATPDEPYAWDSREYLRQKLVGQFVTFVRDFTATSGRDHGRIYLGGT 118
Query: 233 FYPDGETAKDLAME--LVENGLAKYI-EWSANMME--EDAKRRLKAA-DLQAKKTRLRMW 286
D E + A+ L+E K E+S ++E E AK + + A R W
Sbjct: 119 SPADAENVAEGAVSAGLLEVRQGKVADEYSTKLLELQEQAKSAGRGKWNSNAGTIRDIRW 178
Query: 287 TNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG 346
P + K + Q V+E+V D V +P + + LS +R P
Sbjct: 179 VIDNPRELVDK--YAQKPIDAVIEMVR-DGSTVRAFLLPNFEYIT---LQLSGVRAPSTR 232
Query: 347 NPRK-DEKPAAYAREAREFLRTRLIGRQVNVQME 379
NP D + A++ EA+ F +RL+ R V + +E
Sbjct: 233 NPNAADSRAEAFSEEAKFFAESRLLQRDVQIILE 266
Score = 104 (41.7 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 287 TNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG 346
T VPP + S A + G V V+SGD +I+ P+ E V LS++ P++G
Sbjct: 8 TPTVPPPAASSA-NPAVRRGLVKSVLSGDAVILQGQ--PHNGPPPEWTVYLSNVTAPRLG 64
Query: 347 NPRKDEKPAA----YAREAREFLRTRLIGRQVNVQMEYS 381
D A YA ++RE+LR +L+G+ V +++
Sbjct: 65 RRPTDSASATPDEPYAWDSREYLRQKLVGQFVTFVRDFT 103
Score = 92 (37.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 41/174 (23%), Positives = 71/174 (40%)
Query: 2 QEVTFRVDYAVP---NIGREF-GTVILGDKNVAMLVVSEGWAKV-KEQGSQKGEASPFLA 56
++V ++DY P N + T+ +GD+N+A ++S G +KV + + + +S +
Sbjct: 415 KKVQIQIDYVQPKSENFPEKTCATIKIGDQNIAEGLISRGLSKVVRHRADDENRSSEY-D 473
Query: 57 ELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIV 116
LL E A+ G ++ AE + GD + L +G +G+V
Sbjct: 474 TLLAAEANAEKGKKGLFADK--TAEKKDTHRIQEITGDLAKAKQF-LPYLQRGGRAEGVV 530
Query: 117 EQARDGSTLRVYLLPEFQFVQVFVAGXXXXXXXXXXXXXXDTDTEETNGDVSAA 170
E GS LR+Y+ E + + G T E D +AA
Sbjct: 531 EFLSGGSRLRIYIPKETVLITFLLGGINCPKGARVGPGGVSTGAAEPFADEAAA 584
Score = 71 (30.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 27/118 (22%), Positives = 55/118 (46%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVD-KFKNLIGSVFYPDGETAKDLAMELVENGLA 253
D PF A+ F R+L ++V+I ++ V K +N +++A L+ GL+
Sbjct: 397 DIPFMFQAREFLRKRLLGKKVQIQIDYVQPKSENFPEKTCATIKIGDQNIAEGLISRGLS 456
Query: 254 KYIEWSANMMEEDAKR-RLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 310
K + A+ ++ L AA+ A+K + ++ + + ++ I Q TG + +
Sbjct: 457 KVVRHRADDENRSSEYDTLLAAEANAEKGKKGLFADKTAEKKDTHRI--QEITGDLAK 512
Score = 45 (20.9 bits), Expect = 3.7e-27, Sum P(2) = 3.7e-27
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 20 GTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGA 79
G+++ N+A ++ EG+AK + G + +L E QAK + L W
Sbjct: 275 GSIVHPKGNIAESLLREGYAKCVDWSI--GLCTGGAQKLRDAERQAKEKRLRLWKSYQPT 332
Query: 80 AEA 82
+ A
Sbjct: 333 SSA 335
Score = 43 (20.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 231 SVFYPDGETAKDLAMELVENGLA 253
+V+Y G D+ L+ GLA
Sbjct: 850 TVYYDSGNKKVDIGKSLIAEGLA 872
Score = 37 (18.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 894 SRDRQAALENLEKFQEEAK 912
+R+ AA E F EEAK
Sbjct: 231 TRNPNAADSRAEAFSEEAK 249
>POMBASE|SPCC645.08c [details] [associations]
symbol:snd1 "RNA-binding protein Snd1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016442 "RNA-induced
silencing complex" evidence=IEA] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0031048 "chromatin
silencing by small RNA" evidence=NAS] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 PomBase:SPCC645.08c GO:GO:0005829
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0016788
GO:GO:0031048 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
HOGENOM:HOG000173592 KO:K15979 OMA:IWKDYVA EMBL:AB108422 PIR:T41525
RefSeq:NP_588117.1 ProteinModelPortal:Q9Y7U7 STRING:Q9Y7U7
PRIDE:Q9Y7U7 EnsemblFungi:SPCC645.08c.1 GeneID:2539488
KEGG:spo:SPCC645.08c OrthoDB:EOG473T0D NextBio:20800650
Uniprot:Q9Y7U7
Length = 878
Score = 465 (168.7 bits), Expect = 3.0e-65, Sum P(3) = 3.0e-65
Identities = 139/483 (28%), Positives = 227/483 (46%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G NVA +VV G VI +R D +RS YD +S K+P +I +
Sbjct: 415 GTNVALMVVKSGYATVIRYRMDSVDRSPIYDFLIEAEKAAQEGRKGMWSGKKPAYENIVN 474
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
+ + ++ +R +L LQR+R++ ++E V+SG RF+ PKE C F+ +G+R P R
Sbjct: 475 ASESSLR-SRQYLSSLQRTRKLSVIIENVISGSRFRCFCPKENCYFMFACAGIRTPRTAR 533
Query: 579 NERYSNEAL----LLMRQKILQRDVEIEVETVDRTGTFLGSLWESR-TNVAVILLEAGLA 633
N++ E L + + +LQ D ++E+ +VD G FLG ++ + TN A+ LL GLA
Sbjct: 534 NDQEKGEPFAEESLSLAKSLLQHDAQVEILSVDNNGCFLGDIYVNHDTNFALKLLSQGLA 593
Query: 634 KLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQ--KE--VLK 689
Q + S E +AK QK+ +W +YV E+ + E + KE L
Sbjct: 594 WCQGYASQSNVQYSQY-HDTEAAAKEQKVGMWHDYVPPEKKAASTEKESENTVKEPIYLD 652
Query: 690 VVVTEILGGGKFYVQQVGD--QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 747
+V+++I GKF Q +G Q++ ++ L SL P + G V A + D
Sbjct: 653 IVLSDIAEDGKFSFQIIGTGIQQLETLMSDLGSLKKSFKP---SEKINVGMNVAAISALD 709
Query: 748 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 807
N+ R ++ RE N +V DYG+ E +P+ + + + + P AQL L
Sbjct: 710 NAMYRGRVLRCDRE-----NQAADVLLYDYGSVEQIPFKNISSLPDTYTKLKPQAQLARL 764
Query: 808 AYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVA 867
+Y+++P +Y +A E N + LV + D +
Sbjct: 765 SYVQLPPPSSDYYEDARLVFRELAMN-----KGLVAKVDGHEGNVYSVTLYNPSDGS--- 816
Query: 868 VDAEISINTLMVQEGLARVERRKRWGSRDRQ-AALENLEKFQEEAKTARIGMWQYGD-IQ 925
D IN +V G+A V +K+ ++ A+L LE+ Q+EA+ IG W YGD ++
Sbjct: 817 -DFSDCINAQLVALGMASVIPKKKTSHFEKDTASLNILEEHQQEARLNHIGFWVYGDPLE 875
Query: 926 SDD 928
+D
Sbjct: 876 YED 878
Score = 201 (75.8 bits), Expect = 3.0e-65, Sum P(3) = 3.0e-65
Identities = 64/192 (33%), Positives = 102/192 (53%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKN---LIGSVFYPDGETAKDLAMELVENGL 252
EP +AK F R+L R V V+E +D N +G+V +P G ++A L+ +GL
Sbjct: 223 EPCGDEAKQFVVTRLLQRNV--VIELLDLAPNGVSFLGNVLHPAG----NIATFLLSSGL 276
Query: 253 AKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVP--PQSNSKAIHDQNFTGKVVE 310
+ + + + + + L+ + +AK +RL +W N P NS ++ D ++ V
Sbjct: 277 GRVADNHISALGPETMQSLRTIERKAKISRLGIWKNISVSIPDINSLSLKD--YSAVVSR 334
Query: 311 VVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLRTRLI 370
V+S D + V D+ G E R+ LSSIR P+ N EK A Y EAREFLR ++I
Sbjct: 335 VISTDTLEVRKDN---G---VECRIQLSSIRHPRPSN----EKEAPYQLEAREFLRKKII 384
Query: 371 GRQVNVQMEYSR 382
G++V V +++ R
Sbjct: 385 GKRVQVSLDFIR 396
Score = 127 (49.8 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 51/185 (27%), Positives = 86/185 (46%)
Query: 558 LIPKETCSIAFSFSGVRCP-------------GRNERYSNEALLLMRQKILQRDVEIEVE 604
L PK+ + S +GVRCP E +EA + ++LQR+V IE+
Sbjct: 188 LSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGDEAKQFVVTRLLQRNVVIELL 247
Query: 605 TVDRTG-TFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS-HLLEQAEKSAKSQKL 662
+ G +FLG++ N+A LL +GL ++ + S P++ L E+ AK +L
Sbjct: 248 DLAPNGVSFLGNVLHPAGNIATFLLSSGLGRVADNHISALGPETMQSLRTIERKAKISRL 307
Query: 663 KIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLN 722
IW+N N +++ V +V+ T+ L K + Q ++S++ S N
Sbjct: 308 GIWKNISVSIPDINSLSLKDYSAVVSRVISTDTLEVRKDNGVECRIQ-LSSIRHPRPS-N 365
Query: 723 LQEAP 727
+EAP
Sbjct: 366 EKEAP 370
Score = 120 (47.3 bits), Expect = 3.0e-65, Sum P(3) = 3.0e-65
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 10 YAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQGSQ-KGEA-SPFLAELLRLEEQAKL 67
Y +P RE+G + + ++A ++ EG AK++ + ++ +G + + + L ++ A+
Sbjct: 75 YVIPTSKREYGRIRTSEFDLAESLLREGLAKLRPEATRNEGTSENSYFVSLEEAQDHAQQ 134
Query: 68 QGLGRWSKVPGAAEASIRNLPPSAIGDSSN-FNAMALLDANKGRPMQGIVEQARDGSTLR 126
LG W G ++ + + + +N N L A+KG+ + GIVE R+G +R
Sbjct: 135 YKLGIW----GPSDDVV-------VTEKANPANPAKFLKAHKGKKLNGIVETIRNGDQVR 183
Query: 127 V--YLLP-EFQFVQVFVAGXXXXXXXXXXXXXXDTDTE-ETNGD 166
V +L P + Q V + +AG T +E E GD
Sbjct: 184 VRLFLSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGD 227
Score = 101 (40.6 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 195 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAK-DLAMELVENGL 252
DEPFA +A+ F+ V+ R + L + K G + T++ DLA L+ GL
Sbjct: 49 DEPFAFEAQEFSRRLVVGRPASVSTLYVIPTSKREYGRI-----RTSEFDLAESLLREGL 103
Query: 253 AKYI-EWSAN--MMEEDAKRRLKAADLQAKKTRLRMW--------TNYVPPQSNSKAI-- 299
AK E + N E L+ A A++ +L +W T P + +K +
Sbjct: 104 AKLRPEATRNEGTSENSYFVSLEEAQDHAQQYKLGIWGPSDDVVVTEKANPANPAKFLKA 163
Query: 300 HDQNFTGKVVEVV-SGDCIIVADDSIPYGNALAERRVNLSSIRCPK----IGNPRK---D 351
H +VE + +GD + V P + L ++L+ +RCP+ +P + +
Sbjct: 164 HKGKKLNGIVETIRNGDQVRVRLFLSPKQHQLVT--ISLAGVRCPRSTFTATSPEQTSSE 221
Query: 352 EKPAAYAREAREFLRTRLIGRQVNVQM 378
++P EA++F+ TRL+ R V +++
Sbjct: 222 QEPCG--DEAKQFVVTRLLQRNVVIEL 246
Score = 88 (36.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 34/164 (20%), Positives = 75/164 (45%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA ++ + +L + ++ + VD +G + Y + +T + A++L+ GLA
Sbjct: 540 EPFAEESLSLAKS-LLQHDAQVEILSVDNNGCFLGDI-YVNHDT--NFALKLLSQGLA-- 593
Query: 256 IEWSANMMEEDAKRRLKAADLQA--KKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVS 313
W + + + D +A K+ ++ MW +YVPP+ + + ++ V E +
Sbjct: 594 --WCQGYASQSNVQYSQYHDTEAAAKEQKVGMWHDYVPPEKKAASTEKES-ENTVKEPIY 650
Query: 314 GDCII--VADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPA 355
D ++ +A+D + + + +G+ +K KP+
Sbjct: 651 LDIVLSDIAEDG-KFSFQIIGTGIQQLETLMSDLGSLKKSFKPS 693
Score = 78 (32.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 544 AVVEYVLSGHRFKVLIPKET-CSIAFSFSGVRCPG-RNER---YSNEALLLMRQKILQRD 598
AVV V+S +V C I S +R P NE+ Y EA +R+KI+ +
Sbjct: 330 AVVSRVISTDTLEVRKDNGVECRI--QLSSIRHPRPSNEKEAPYQLEAREFLRKKIIGKR 387
Query: 599 VEIEVETVDRTGTFLGSL------WESRTNVAVILLEAGLAK-LQTSFGS-DRIPDSHLL 650
V++ ++ + L ++ TNVA++++++G A ++ S DR P L
Sbjct: 388 VQVSLDFIRPGQNDLPAINNCTVKLSDGTNVALMVVKSGYATVIRYRMDSVDRSPIYDFL 447
Query: 651 EQAEKSAKSQKLKIWENYVEG-EEVSNGAAVEGKQKEVL 688
+AEK+A+ + +W E + N + + ++ L
Sbjct: 448 IEAEKAAQEGRKGMWSGKKPAYENIVNASESSLRSRQYL 486
Score = 77 (32.2 bits), Expect = 7.1e-45, Sum P(3) = 7.1e-45
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 313 SGDC--IIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLRTRLI 370
SGD I++ D++ + E++ +L+ + CP+ R+ ++P A+ EA+EF R ++
Sbjct: 14 SGDSFNILIKDNA----KKITEKQFSLAYVECPRFR--REGDEPFAF--EAQEFSRRLVV 65
Query: 371 GRQVNVQMEY 380
GR +V Y
Sbjct: 66 GRPASVSTLY 75
Score = 62 (26.9 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 8 VDYAVPNIGREF-GTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLR-LEEQA 65
+D A PN G F G V+ N+A ++S G +V + + P + LR +E +A
Sbjct: 247 LDLA-PN-GVSFLGNVLHPAGNIATFLLSSGLGRVAD--NHISALGPETMQSLRTIERKA 302
Query: 66 KLQGLGRWSKV 76
K+ LG W +
Sbjct: 303 KISRLGIWKNI 313
Score = 49 (22.3 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 460 PAGVNVAELVVSRGLGNVI-NH 480
PAG N+A ++S GLG V NH
Sbjct: 263 PAG-NIATFLLSSGLGRVADNH 283
Score = 37 (18.1 bits), Expect = 4.2e-48, Sum P(3) = 4.2e-48
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 448 ASAVAQSNAAGQPAGVNVAELVVSRGLG-NVI 478
A++ Q+++ +P G + VV+R L NV+
Sbjct: 212 ATSPEQTSSEQEPCGDEAKQFVVTRLLQRNVV 243
>UNIPROTKB|F1SML4 [details] [associations]
symbol:SND1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 Pfam:PF00565 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 GO:GO:0005739 GO:GO:0003676 GO:GO:0090305
GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 EMBL:CU861978 EMBL:CU640389
EMBL:CU856688 Ensembl:ENSSSCT00000018062 OMA:XYRARVE Uniprot:F1SML4
Length = 594
Score = 307 (113.1 bits), Expect = 5.3e-62, Sum P(3) = 5.3e-62
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 196 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 255
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L+++G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKDGFARC 296
Query: 256 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 315
++WS + A++ L+AA+ AK RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKDRRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 316 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 367
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 368 RLIGRQVNVQMEYSR 382
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 281 (104.0 bits), Expect = 5.3e-62, Sum P(3) = 5.3e-62
Identities = 62/149 (41%), Positives = 88/149 (59%)
Query: 462 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 520
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 521 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 578
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 579 N--------ERYSNEALLLMRQKILQRDV 599
N E +S EA L ++ +LQR+V
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREV 594
Score = 171 (65.3 bits), Expect = 5.3e-62, Sum P(3) = 5.3e-62
Identities = 48/145 (33%), Positives = 79/145 (54%)
Query: 2 QEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKEQGSQKGEASPFLAE 57
+EV F ++ P GRE+G + LG +N+A +V+EG A + +G + +P
Sbjct: 93 KEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRREGMRAN--NPEQNR 148
Query: 58 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVE 117
L EEQAK G WS+ G+ +IR+L + I + +F +D++ +P+ I+E
Sbjct: 149 LAECEEQAKAAKKGMWSE--GSGSQTIRDLKYT-IENPRHF-----VDSHHQKPVNAIIE 200
Query: 118 QARDGSTLRVYLLPEFQFVQVFVAG 142
RDGS +R LLP++ V V ++G
Sbjct: 201 HVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 147 (56.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 61/259 (23%), Positives = 111/259 (42%)
Query: 462 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 521
G N+AE +V+ GL R+ +N S+ I+DL
Sbjct: 120 GENIAESLVAEGLAT---RREGMRANNPEQNRLAECEEQAKAAKKGMWSEGSGSQTIRDL 176
Query: 522 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 576
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 177 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRRE 234
Query: 577 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 632
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 235 ADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKDGF 293
Query: 633 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 692
A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ + V+
Sbjct: 294 ARCVDWSIAVYTRGAEKLRAAERFAKDRRLRIWRDYV-----APTANLDQKDKQFVAKVM 348
Query: 693 TEILGGGKFYVQ-QVGDQK 710
++L V+ GD K
Sbjct: 349 -QVLNADAIVVKLNSGDYK 366
Score = 133 (51.9 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 56/199 (28%), Positives = 85/199 (42%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 254
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 255 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 312
E AN E++ RL + QAK + MW+ S S+ I D +T V
Sbjct: 135 RREGMRANNPEQN---RLAECEEQAKAAKKGMWSE----GSGSQTIRDLKYTIENPRHFV 187
Query: 313 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 360
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 361 AREFLRTRLIGRQVNVQME 379
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 97 (39.2 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 306 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 358
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 359 REAREFLRTRLIGRQVNVQME 379
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 50 (22.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 196 EPFALDAKYFTEMRVLNREV 215
EPF+ +A FT+ VL REV
Sbjct: 575 EPFSEEATLFTKELVLQREV 594
Score = 41 (19.5 bits), Expect = 5.9e-37, Sum P(3) = 5.9e-37
Identities = 25/118 (21%), Positives = 49/118 (41%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 639
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILG 697
G + + + ++S+ +L E + NG + K KEV V +I G
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEVPIHRVADISG 509
Score = 38 (18.4 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 6/21 (28%), Positives = 15/21 (71%)
Query: 20 GTVILGDKNVAMLVVSEGWAK 40
GT++ + N+ L++ +G+A+
Sbjct: 275 GTILHPNGNITELLLKDGFAR 295
>UNIPROTKB|H7C597 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016788 "hydrolase activity, acting on
ester bonds" evidence=IEA] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR002999 GO:GO:0003676 GO:GO:0016788 Pfam:PF00567
Gene3D:2.40.50.90 SUPFAM:SSF50199 EMBL:AC073934 HGNC:HGNC:30646
ChiTaRS:SND1 EMBL:AC006529 EMBL:AC008039 EMBL:AC009181
ProteinModelPortal:H7C597 Ensembl:ENST00000486037 Bgee:H7C597
Uniprot:H7C597
Length = 231
Score = 259 (96.2 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 59/144 (40%), Positives = 83/144 (57%)
Query: 467 ELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLTMAP 525
E +VS+GL VI +R D ++RS++YD +S KE P+ + D++
Sbjct: 1 EALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVADIS-GD 59
Query: 526 VKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GRN---- 579
+KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP RN
Sbjct: 60 TQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGARNLPGL 119
Query: 580 ----ERYSNEALLLMRQKILQRDV 599
E +S EA L ++ +LQR+V
Sbjct: 120 VQEGEPFSEEATLFTKELVLQREV 143
Score = 95 (38.5 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 663 KIWENYVEG--EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQV--GDQKVASVQQQL 718
++W +Y E EEV + + V VTEI FYVQ V G Q + + + +
Sbjct: 142 EVWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQ-LEKLMENM 200
Query: 719 ASLNLQEAPVIGAFNPKKGEIVLAQFSADNSW 750
+ PV G++ P++GE +A+F D W
Sbjct: 201 RNDIASHPPVEGSYAPRRGEFCIAKF-VDGEW 231
Score = 70 (29.7 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 31/110 (28%), Positives = 44/110 (40%)
Query: 33 VVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAI 92
+VS+G A V + S ELL E +A G G SK E I + +
Sbjct: 3 LVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS- 57
Query: 93 GDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 142
GD+ GR + +VE GS L++YL E + +AG
Sbjct: 58 GDTQKAKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 106
Score = 50 (22.7 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 196 EPFALDAKYFTEMRVLNREV 215
EPF+ +A FT+ VL REV
Sbjct: 124 EPFSEEATLFTKELVLQREV 143
>UNIPROTKB|B7WPM2 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 EMBL:AC022023
IPI:IPI00440758 HGNC:HGNC:11712 HOVERGEN:HBG108555
HOGENOM:HOG000081819 ProteinModelPortal:B7WPM2 SMR:B7WPM2
STRING:B7WPM2 Ensembl:ENST00000369281 ArrayExpress:B7WPM2
Bgee:B7WPM2 Uniprot:B7WPM2
Length = 1075
Score = 195 (73.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 659 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 718
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 719 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 777
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 778 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 814
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
>UNIPROTKB|H9KV62 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 EMBL:AC022023
HGNC:HGNC:11712 ProteinModelPortal:H9KV62 SMR:H9KV62
Ensembl:ENST00000369280 Bgee:H9KV62 Uniprot:H9KV62
Length = 1104
Score = 195 (73.7 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 659 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 718
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 719 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 777
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 778 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 814
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
Score = 159 (61.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D+
Sbjct: 499 VVAHIQTPEDFFCQQLQSGRKLAELQASLSKY-CDQLPPRSDFYPAIGDICCAQFSEDDQ 557
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 558 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAG 611
Query: 810 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 869
+K P+L + PEA + + N + + + +SS V+ V +D
Sbjct: 612 VK-PSL-GIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLD 669
Query: 870 AEISI 874
A ++
Sbjct: 670 AGFAV 674
Score = 40 (19.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 4 VTFRVDYAVPNIGREFGTVIL 24
VTF V+ +PN G+ V++
Sbjct: 421 VTFAVEVELPNSGKLLDHVLI 441
>UNIPROTKB|H9KV63 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 EMBL:AC022023
HGNC:HGNC:11712 ProteinModelPortal:H9KV63 SMR:H9KV63
Ensembl:ENST00000369282 Bgee:H9KV63 Uniprot:H9KV63
Length = 1113
Score = 195 (73.7 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 659 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 718
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 719 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 777
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 778 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 814
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
Score = 159 (61.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D+
Sbjct: 499 VVAHIQTPEDFFCQQLQSGRKLAELQASLSKY-CDQLPPRSDFYPAIGDICCAQFSEDDQ 557
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 558 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAG 611
Query: 810 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 869
+K P+L + PEA + + N + + + +SS V+ V +D
Sbjct: 612 VK-PSL-GIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLD 669
Query: 870 AEISI 874
A ++
Sbjct: 670 AGFAV 674
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 4 VTFRVDYAVPNIGREFGTVIL 24
VTF V+ +PN G+ V++
Sbjct: 421 VTFAVEVELPNSGKLLDHVLI 441
>UNIPROTKB|Q9BXT4 [details] [associations]
symbol:TDRD1 "Tudor domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0033391
"chromatoid body" evidence=IEA] [GO:0043186 "P granule"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0031047
"gene silencing by RNA" evidence=ISS] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0034587 "piRNA
metabolic process" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0007281 "germ cell development" evidence=ISS]
[GO:0071546 "pi-body" evidence=ISS] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0007275
GO:GO:0007126 GO:GO:0046872 EMBL:CH471066 GO:GO:0008270
GO:GO:0007283 GO:GO:0007281 GO:GO:0031047 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 GO:GO:0071546
GO:GO:0034587 GO:GO:0033391 eggNOG:NOG267246 EMBL:AC022023
EMBL:AK122916 EMBL:AK304331 EMBL:BC035010 EMBL:BC063133
EMBL:AF285606 EMBL:AK024735 IPI:IPI00394796 IPI:IPI00440758
IPI:IPI00647142 IPI:IPI00908751 RefSeq:NP_942090.1
UniGene:Hs.333132 ProteinModelPortal:Q9BXT4 SMR:Q9BXT4
IntAct:Q9BXT4 MINT:MINT-7242011 STRING:Q9BXT4 PhosphoSite:Q9BXT4
DMDM:206729901 PRIDE:Q9BXT4 Ensembl:ENST00000251864 GeneID:56165
KEGG:hsa:56165 UCSC:uc001lbf.3 UCSC:uc001lbg.1 UCSC:uc001lbi.1
UCSC:uc010qsc.2 CTD:56165 GeneCards:GC10P115929 H-InvDB:HIX0009225
HGNC:HGNC:11712 HPA:HPA037729 HPA:HPA037730 MIM:605796
neXtProt:NX_Q9BXT4 PharmGKB:PA36430 HOVERGEN:HBG108555
InParanoid:Q9BXT4 OMA:VGYVDYG GenomeRNAi:56165 NextBio:61802
ArrayExpress:Q9BXT4 Bgee:Q9BXT4 CleanEx:HS_TDRD1
Genevestigator:Q9BXT4 GermOnline:ENSG00000095627 Uniprot:Q9BXT4
Length = 1180
Score = 195 (73.7 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 659 SQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQL 718
++++ IW + ++ + ++ K+ +K VTE G FYVQ + + + Q
Sbjct: 240 TKEIAIWAERIMFSDLRS---LQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLS 296
Query: 719 ASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDY 777
ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDY
Sbjct: 297 ASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDY 351
Query: 778 GNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 814
GN+E++P N++ ++ ++ PP A C +A + IPA
Sbjct: 352 GNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
Score = 159 (61.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D+
Sbjct: 499 VVAHIQTPEDFFCQQLQSGRKLAELQASLSKY-CDQLPPRSDFYPAIGDICCAQFSEDDQ 557
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 558 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAG 611
Query: 810 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 869
+K P+L + PEA + + N + + + +SS V+ V +D
Sbjct: 612 VK-PSL-GIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLD 669
Query: 870 AEISI 874
A ++
Sbjct: 670 AGFAV 674
Score = 40 (19.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 4 VTFRVDYAVPNIGREFGTVIL 24
VTF V+ +PN G+ V++
Sbjct: 421 VTFAVEVELPNSGKLLDHVLI 441
>RGD|1306140 [details] [associations]
symbol:Tdrd1 "tudor domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0007281 "germ
cell development" evidence=IEA;ISO] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0031047
"gene silencing by RNA" evidence=IEA;ISO] [GO:0033391 "chromatoid
body" evidence=IEA;ISO] [GO:0034587 "piRNA metabolic process"
evidence=IEA;ISO] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=IEA;ISO] [GO:0043186 "P granule" evidence=ISO]
[GO:0071546 "pi-body" evidence=IEA;ISO] InterPro:IPR002893
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999
RGD:1306140 GO:GO:0046872 GO:GO:0008270 GO:GO:0007283 GO:GO:0007281
GO:GO:0031047 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
EMBL:CH473986 GeneTree:ENSGT00520000055580 CTD:56165 OMA:VGYVDYG
OrthoDB:EOG4C87RJ IPI:IPI00358529 RefSeq:NP_001099672.1
UniGene:Rn.156064 Ensembl:ENSRNOT00000023024 GeneID:292129
KEGG:rno:292129 UCSC:RGD:1306140 NextBio:633813 Uniprot:D4A3N0
Length = 1173
Score = 193 (73.0 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 46/134 (34%), Positives = 75/134 (55%)
Query: 683 KQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVI--GAFNPKKGEIV 740
K E+ K VTE G FYVQ + + + Q ASL A ++ + P KGE+
Sbjct: 255 KSMEI-KGTVTEFKHPGHFYVQLYSSEVLEYMNQLSASLKETYANMVPEDGYLPVKGEVC 313
Query: 741 LAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPP 800
+A+++ D +WNRA++ E V+ + K V YIDYGN+E++P +++ + S+S PP
Sbjct: 314 VAKYTVDQTWNRAVV-----EGVDVLQKKAHVLYIDYGNEEIIPVDRIHQLSRSISLFPP 368
Query: 801 LAQLCSLAYIKIPA 814
A C ++ + +PA
Sbjct: 369 SAIKCYVSGV-VPA 381
Score = 150 (57.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 49/134 (36%), Positives = 67/134 (50%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV I F+ QQ+ K+A +Q+ L+ P F P G++ AQFS D+
Sbjct: 493 VVAHIQTPEDFFCQQLQSGHKLAELQESLSEYCSHVTPR-SDFYPTIGDMCCAQFSEDDQ 551
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 552 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLKRLCPIIPKLLDLPMQALNCVLAG 605
Query: 810 IKIPALEDEYGPEA 823
+K P+L + PEA
Sbjct: 606 VK-PSL-GMWTPEA 617
Score = 143 (55.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 65/234 (27%), Positives = 103/234 (44%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGS 641
++ EA+ +MR+ + R V + V V GT +L E L A A L + F
Sbjct: 613 WTPEAICVMRKAVQNRMVTVRV--VGMQGT--RALVELVDKSVAPHLSASKALLDSGFA- 667
Query: 642 DRIPDSHLLEQAEKSAKSQKLKIWENYVEGE-EVSNGAAVEGKQKEVLKVVVTEILGGGK 700
I + ++ SA++ + + VEG EV VE E + V+V + G+
Sbjct: 668 --IEEKDIVADKGSSARASNVPL---AVEGAVEVLEWTWVEFTVDETVDVMVCMMHSPGE 722
Query: 701 FYVQQVGD---QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVN 757
FY + D +K+ + + LA Q+ P F + G A F+ D +W RA++
Sbjct: 723 FYCHCLKDDALKKLDDLNKSLADYCAQKPP--NGFKAEVGRPCCACFAGDGNWYRALV-- 778
Query: 758 APREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIK 811
+E + S N K V ++DYGN E V ++L I P P C L I+
Sbjct: 779 --KEILPSGNVK--VHFVDYGNVEEVTTDQLHAIAPQFLLLPFQGMQCWLVDIQ 828
Score = 48 (22.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 205 FTEMRVLNREVRIVLEG-VDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMM 263
F+++R L + ++G V +FK+ G FY +++ +E + A E ANM+
Sbjct: 245 FSDLRSLQLRKSMEIKGTVTEFKHP-GH-FYVQLYSSE--VLEYMNQLSASLKETYANMV 300
Query: 264 EEDAKRRLKAADLQAKKTRLRMWTNYV 290
ED +K AK T + W V
Sbjct: 301 PEDGYLPVKGEVCVAKYTVDQTWNRAV 327
Score = 39 (18.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 77 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIV 116
PG +E + R + IG N +L N G G+V
Sbjct: 455 PGTSEDTGRLTAENRIGAERNALVPTVLTLNVGDEFCGVV 494
>MGI|MGI:1933218 [details] [associations]
symbol:Tdrd1 "tudor domain containing 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0031047
"gene silencing by RNA" evidence=IMP] [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0034587 "piRNA metabolic process" evidence=IMP]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0071546 "pi-body"
evidence=IDA] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 MGI:MGI:1933218 GO:GO:0007275
GO:GO:0007126 GO:GO:0046872 GO:GO:0008270 GO:GO:0007283
GO:GO:0007281 GO:GO:0031047 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 GO:GO:0071546 GO:GO:0034587
GO:GO:0033391 PDB:4B9W PDBsum:4B9W eggNOG:NOG267246
GeneTree:ENSGT00520000055580 CTD:56165 HOVERGEN:HBG108555
OMA:VGYVDYG EMBL:AB067571 EMBL:AB183526 EMBL:AB183527 EMBL:AB183528
EMBL:AB183529 EMBL:AK029806 EMBL:AF285591 EMBL:BC129954
EMBL:BC129955 IPI:IPI00320916 RefSeq:NP_001002238.1
RefSeq:NP_001002240.1 RefSeq:NP_001002241.1 RefSeq:NP_113564.2
UniGene:Mm.247541 PDB:4B9X PDBsum:4B9X ProteinModelPortal:Q99MV1
SMR:Q99MV1 DIP:DIP-48523N STRING:Q99MV1 PhosphoSite:Q99MV1
PaxDb:Q99MV1 PRIDE:Q99MV1 Ensembl:ENSMUST00000078723
Ensembl:ENSMUST00000111604 Ensembl:ENSMUST00000111606
Ensembl:ENSMUST00000121249 GeneID:83561 KEGG:mmu:83561
UCSC:uc008hzi.1 HOGENOM:HOG000081819 InParanoid:Q8CDN7
OrthoDB:EOG4C87RJ NextBio:350650 Bgee:Q99MV1 CleanEx:MM_TDRD1
Genevestigator:Q99MV1 GermOnline:ENSMUSG00000025081 Uniprot:Q99MV1
Length = 1172
Score = 183 (69.5 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 42/133 (31%), Positives = 71/133 (53%)
Query: 683 KQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVI--GAFNPKKGEIV 740
K+ +K VTE FY+Q + + ++ Q SL A V+ + P KGE+
Sbjct: 255 KKTMEIKGTVTEFKHPSNFYIQLYSSEVLENMNQLSTSLKETYANVVPEDGYLPVKGEVC 314
Query: 741 LAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPP 800
+A+++ D +WNRA++ + V+ + K V YIDYGN+E++P + + P+ L PP
Sbjct: 315 VAKYTVDQTWNRAIV-----QAVDVLQRKAHVLYIDYGNEEMIPIDSVHPLSRGLDLFPP 369
Query: 801 LAQLCSLAYIKIP 813
A C ++ + IP
Sbjct: 370 SAIKCCVSGV-IP 381
Score = 153 (58.9 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 51/144 (35%), Positives = 70/144 (48%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV I F+ QQ+ K+A +Q+ L+ P F P G++ AQFS D+
Sbjct: 494 VVAHIQTPEDFFCQQLQSGHKLAELQESLSEYCGHVIPR-SDFYPTIGDVCCAQFSEDDQ 552
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 553 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLKRLCPIIPKLLDLPMQALNCVLAG 606
Query: 810 IKIPALEDEYGPEAAEFLNEHTYN 833
+K P+L + PEA + E N
Sbjct: 607 VK-PSL-GIWTPEAVCVMKEMVQN 628
Score = 133 (51.9 bits), Expect = 0.00012, P = 0.00012
Identities = 64/236 (27%), Positives = 102/236 (43%)
Query: 582 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGS 641
++ EA+ +M++ + R V + V V GT +L E + A A + + F
Sbjct: 614 WTPEAVCVMKEMVQNRMVTVRV--VGMLGT--RALVELIDKSVAPHVSASKALIDSGFA- 668
Query: 642 DRIPDSHLLEQAEKSAKSQKLKIWENYVEGE-EVSNGAAVEGKQKEVLKVVVTEILGGGK 700
I + + A+K + + +EG E VE E + VVV + G+
Sbjct: 669 --IKEKDV---ADKGSSMHTASV-PLAIEGPAEALEWTWVEFTVDETVDVVVCMMYSPGE 722
Query: 701 FYVQQVGD---QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVN 757
FY + D +K+ + Q LA Q+ P F + G A FS D +W RA++
Sbjct: 723 FYCHFLKDDALEKLDDLNQSLADYCAQKPP--NGFKAEIGRPCCAFFSGDGNWYRALV-- 778
Query: 758 APREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIP 813
+E + S N K V ++DYGN E V ++L+ I P P C L I+ P
Sbjct: 779 --KEILPSGNVK--VHFVDYGNVEEVTTDQLQAILPQFLLLPFQGMQCWLVDIQPP 830
>UNIPROTKB|F1MZE7 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071546 "pi-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0033391
"chromatoid body" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872
GO:GO:0008270 GO:GO:0007283 GO:GO:0007281 GO:GO:0031047
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 GO:GO:0043046
GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
GeneTree:ENSGT00520000055580 OMA:VGYVDYG EMBL:DAAA02059266
IPI:IPI00712365 Ensembl:ENSBTAT00000009002 Uniprot:F1MZE7
Length = 1184
Score = 182 (69.1 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 45/129 (34%), Positives = 70/129 (54%)
Query: 688 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFN--PKKGEIVLAQFS 745
+K VTE G FYVQ + + + Q ASL A + P KGEI +A+++
Sbjct: 267 IKGTVTEFKHPGDFYVQLYSSEVLECMNQLSASLKETYANKAHEEDHVPVKGEICVAKYT 326
Query: 746 ADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLC 805
D +WNR +I + V+ + +V YIDYGN+E++P N++ ++ + PP A C
Sbjct: 327 VDQTWNRVII-----QDVDLLQKVAQVLYIDYGNEEVIPINRIHQLNRKIDLFPPCAIRC 381
Query: 806 SLAYIKIPA 814
S+A + IPA
Sbjct: 382 SVASV-IPA 389
Score = 160 (61.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/185 (29%), Positives = 83/185 (44%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV + F+ QQ+ +K+A +Q+ L + P F P G+I AQFS D+
Sbjct: 502 VVAHVQTPEDFFCQQLQSGRKLAELQRSLGEY-CSQVPPRSDFYPTIGDICCAQFSEDDQ 560
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E ESV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 561 WYRASVLAYASE--ESVL----VGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAG 614
Query: 810 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 869
+K P+L + PEA + + N + + +SS VT ++
Sbjct: 615 VK-PSL-GIWTPEAVCLMKKIVQNKMITVNVVDKLENSSLVELTDRSVTPHISVTKALLN 672
Query: 870 AEISI 874
A ++
Sbjct: 673 AGFAV 677
>UNIPROTKB|I3LGS1 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS50865 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008270 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GeneTree:ENSGT00520000055580 EMBL:CU019667
Ensembl:ENSSSCT00000027996 Uniprot:I3LGS1
Length = 896
Score = 175 (66.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 688 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGA----FNPKKGEIVLAQ 743
+K VTE FYVQ + V+ QL+S +L+E A + P KGE+ +A+
Sbjct: 79 IKGTVTEFKHPSDFYVQLYSSE-VSEYMNQLSS-SLKETYANKAHEEDYIPVKGEVCVAK 136
Query: 744 FSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQ 803
++ D +WNR +I + ++ + K +V YIDYGN+E +P N++ + ++ PP A
Sbjct: 137 YTVDQTWNRVLI-----QDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAI 191
Query: 804 LCSLAYIKIPA 814
C +A + IPA
Sbjct: 192 KCFVASV-IPA 201
Score = 166 (63.5 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 57/181 (31%), Positives = 78/181 (43%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV I F+ QQ+ K+A +Q L+ + P F P G+I AQFS D
Sbjct: 319 VVAHIQTPEDFFCQQLQSGHKLAELQASLSQY-CSQVPPRSDFYPAIGDICCAQFSEDAQ 377
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E D V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 378 WYRASVLAYASE------DSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAG 431
Query: 810 IKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVD 869
+K P+L + PEA + + N R + +SS VT V +D
Sbjct: 432 VK-PSL-GIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLID 489
Query: 870 A 870
A
Sbjct: 490 A 490
>UNIPROTKB|F1Q1V6 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865
InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GeneTree:ENSGT00520000055580
OMA:VGYVDYG EMBL:AAEX03015539 Ensembl:ENSCAFT00000017934
Uniprot:F1Q1V6
Length = 1169
Score = 176 (67.0 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 42/140 (30%), Positives = 74/140 (52%)
Query: 688 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGA--FNPKKGEIVLAQFS 745
+K VTE FYVQ + + + Q S A + + P KGE+ +A+++
Sbjct: 256 IKGTVTEFKHPSDFYVQLYSSEVLEYMNQLSRSFKETYANMTQEEDYIPVKGEVCVAKYT 315
Query: 746 ADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLC 805
D +WNR +I ++++ + K +V YIDYGN+E++P N++ ++ ++ PP A C
Sbjct: 316 VDQTWNRVII-----QEIDMLQKKAQVLYIDYGNEEIIPINRIHQLNRNIGLFPPCAIKC 370
Query: 806 SLAYIKIPALEDEYGPEAAE 825
+A + IPA E + E +
Sbjct: 371 FVASV-IPA-EGNWSNECVK 388
Score = 148 (57.2 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 49/134 (36%), Positives = 68/134 (50%)
Query: 691 VVTEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNS 749
VV I F+ QQ+ K+A +Q L+ Q +P F P G+I A+FS D+
Sbjct: 490 VVAHIQTPEDFFCQQLQSGHKLAELQASLSEYCGQVSPR-SDFYPTIGDICCARFSEDDQ 548
Query: 750 WNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAY 809
W RA ++ E +SV V Y+DYGN E++ +L PI P L P A C LA
Sbjct: 549 WYRASVLAYASE--QSVL----VGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAG 602
Query: 810 IKIPALEDEYGPEA 823
+K P+L + PEA
Sbjct: 603 VK-PSL-GIWTPEA 614
Score = 47 (21.6 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 4 VTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWA-KVKEQGSQKGEASP 53
VTF VD +P+ G+ +L D +++ G+ K K Q S+K A P
Sbjct: 412 VTFAVDVMLPSSGK-----LLDD-----VLIEMGYGLKPKAQNSKKQSADP 452
>UNIPROTKB|I3LKM6 [details] [associations]
symbol:TDRD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071546 "pi-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0033391
"chromatoid body" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872
GO:GO:0008270 GO:GO:0007283 GO:GO:0007281 GO:GO:0031047
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 GO:GO:0043046
GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
GeneTree:ENSGT00520000055580 OMA:VGYVDYG EMBL:CU019667
Ensembl:ENSSSCT00000023111 Uniprot:I3LKM6
Length = 1183
Score = 175 (66.7 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 688 LKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGA----FNPKKGEIVLAQ 743
+K VTE FYVQ + V+ QL+S +L+E A + P KGE+ +A+
Sbjct: 267 IKGTVTEFKHPSDFYVQLYSSE-VSEYMNQLSS-SLKETYANKAHEEDYIPVKGEVCVAK 324
Query: 744 FSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQ 803
++ D +WNR +I + ++ + K +V YIDYGN+E +P N++ + ++ PP A
Sbjct: 325 YTVDQTWNRVLI-----QDLDVLQKKAQVLYIDYGNEERIPVNRIHKLSRNIDLFPPCAI 379
Query: 804 LCSLAYIKIPA 814
C +A + IPA
Sbjct: 380 KCFVASV-IPA 389
Score = 169 (64.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 90/359 (25%), Positives = 148/359 (41%)
Query: 518 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG 577
IQDL + KKA+ RIP + LS R L P C+I + V P
Sbjct: 336 IQDLDVLQ-KKAQVLYIDYGNEERIPVNRIHKLS--RNIDLFPP--CAIKCFVASV-IPA 389
Query: 578 RNERYSNEALLLMRQKILQRDVEIEVETV--DRTGTFLGSLWESRTNVAV--ILLEAGLA 633
+S++ + ++ +L++ +++ + + TF + + + + +L+E G
Sbjct: 390 EGN-WSSDCVRSIKSLLLEQCCSVKIVDILEEEVVTFAVDVMLTSSGKLLDHVLIEMGYG 448
Query: 634 -KLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVV 692
K + + DS L+ K K+ + + + + ++ E + VV
Sbjct: 449 LKPKGQNSKKQSADSGDLDDVGKMTAENKIVVDRSDLIPKVLTLNVGDE------FRGVV 502
Query: 693 TEILGGGKFYVQQV-GDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWN 751
I F+ QQ+ +K+A +Q L+ + P F P G+I AQFS D W
Sbjct: 503 AHIQTPEDFFCQQLQSGRKLAELQASLSQY-CSQVPPRSDFYPAIGDICCAQFSEDAQWY 561
Query: 752 RAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIK 811
RA ++ E D V Y+DYGN E++ +L PI P L P A C LA +K
Sbjct: 562 RASVLAYASE------DSVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCVLAGVK 615
Query: 812 IPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVDA 870
P+L + PEA + + N R + +SS VT V +DA
Sbjct: 616 -PSL-GIWTPEAICLMKKIVQNKMITVRVADKLENSSLVELTDRSVTPHISVTQVLIDA 672
>UNIPROTKB|E1BWC3 [details] [associations]
symbol:E1BWC3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IEA]
[GO:0071546 "pi-body" evidence=IEA] InterPro:IPR002893 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50865 InterPro:IPR002999 GO:GO:0046872
GO:GO:0008270 GO:GO:0031047 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0071546 GO:GO:0034587 GO:GO:0033391
GeneTree:ENSGT00520000055580 OMA:VGYVDYG EMBL:AADN02030918
IPI:IPI00578444 Ensembl:ENSGALT00000014592 Uniprot:E1BWC3
Length = 1046
Score = 178 (67.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 86/314 (27%), Positives = 142/314 (45%)
Query: 549 VLSGHRFKVLIPK----ETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVE 604
VL R + +IPK +I + +G++ P +++EA+ LM+Q L +D V+
Sbjct: 452 VLQPARLRPMIPKLMDLPAQAIRCTLAGIK-PLLGA-WTSEAISLMKQ--LVKDKVFTVK 507
Query: 605 TVDRTG-TFLGSLWESRT----NVAVILLEAGLAKLQTSFGSDRIPDSHLLEQA---EKS 656
VD+ + L ++ N++ L+E G A + S + + + + QA E +
Sbjct: 508 VVDKESYRCVVELTDASVIPEINISRCLIEKGCAT-EASRMTLQATEMGGVMQANALEDT 566
Query: 657 AKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQ 716
A +K K W + S+ AV+ V+V + G+FY Q ++ ++
Sbjct: 567 ANKKKCK-WSKF------SHKGAVD--------VIVCTLYSPGEFYCQIANSNELCALNS 611
Query: 717 QLASL--NLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFY 774
SL Q+ P F PKKGE A FS D +W RA++ N ++V V +
Sbjct: 612 LNKSLFEYCQKTPP-NVFKPKKGEPCCALFSDDGNWYRALVENIISDRVVQVR------F 664
Query: 775 IDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNS 834
+DYGN E VP + +R I S P C L+ IK PA ++ PEA + ++ T
Sbjct: 665 VDYGNVEEVPVDNMRQISSSFLELPFQGIKCWLSGIK-PA-GSKWNPEATKRFHKCTSGM 722
Query: 835 SNEFRALVEERDSS 848
+ R RD +
Sbjct: 723 KLQARITSFSRDGA 736
Score = 166 (63.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 63/206 (30%), Positives = 92/206 (44%)
Query: 641 SDRIPDSHLLEQAEKS-AKSQKLKIWENYVEG----EEVSNG--AAVEGKQKEVLKVVVT 693
S+++ L+ S +KS + W+ +V G E+ S G ++E + L V VT
Sbjct: 757 SEKLAVKEELQDKNTSPSKSDEKAEWKCHVGGITDKEKTSLGHWESIELAVDQTLSVCVT 816
Query: 694 EILGGGKFYVQQV-----GDQKVASVQQ-QLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 747
E+ FYV GD+ + + + Q + +E P F PK GE A+FS D
Sbjct: 817 EVTSPDLFYVVPAYCKADGDKLLKQLTELQDYCKSCKEQP----FTPKLGEACCARFSGD 872
Query: 748 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 807
W RA+++ + VE V Y DYGN E VP + + PI S P CSL
Sbjct: 873 GRWYRAVVLKVSQSTVE-------VLYADYGNIETVPLSNVLPITDSFLKIPFQTITCSL 925
Query: 808 AYIKIPALEDEYGPEAAEFLNEHTYN 833
A IK + E+ P + L E N
Sbjct: 926 AAIK----KVEWSPLVLDTLKEMLLN 947
Score = 155 (59.6 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 686 EVLKVVVTEILGGGKFYVQQVG-DQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQF 744
+ VVV+ + F+ QQ+ +++A +Q L + P F P GE+ AQF
Sbjct: 362 DTFSVVVSHVQNPEDFFCQQIHIGRQLAELQGHLCEY-CNKLPSDPNFRPVSGELCCAQF 420
Query: 745 SADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQL 804
+ D+ W RA ++ E + V YIDYGN E++ +LRP+ P L P A
Sbjct: 421 TEDDVWYRAAVIAHASE------NNIVVGYIDYGNFEVLQPARLRPMIPKLMDLPAQAIR 474
Query: 805 CSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXXHVT 864
C+LA IK P L + EA + + F V +++S +T
Sbjct: 475 CTLAGIK-PLL-GAWTSEAISLMKQLV--KDKVFTVKVVDKES---------YRCVVELT 521
Query: 865 LVAVDAEISINTLMVQEGLA 884
+V EI+I+ ++++G A
Sbjct: 522 DASVIPEINISRCLIEKGCA 541
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 280 KTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDS 323
K L WT+ + + D+ FT KVV+ S C++ D+
Sbjct: 481 KPLLGAWTSEAISLMK-QLVKDKVFTVKVVDKESYRCVVELTDA 523
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 541 RIPAVVEYVLSGHRFKVLIPKETCSIAFSFS 571
R+P ++E VL+ FK ++ + S+ S
Sbjct: 110 RLPVLLEMVLTKEHFKKIMFSDLQSLGLKKS 140
>UNIPROTKB|E1BWC2 [details] [associations]
symbol:E1BWC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865
InterPro:IPR002999 GO:GO:0046872 GO:GO:0008270 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GeneTree:ENSGT00520000055580
EMBL:AADN02030918 IPI:IPI00589668 Ensembl:ENSGALT00000014593
Uniprot:E1BWC2
Length = 932
Score = 166 (63.5 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 63/206 (30%), Positives = 92/206 (44%)
Query: 641 SDRIPDSHLLEQAEKS-AKSQKLKIWENYVEG----EEVSNG--AAVEGKQKEVLKVVVT 693
S+++ L+ S +KS + W+ +V G E+ S G ++E + L V VT
Sbjct: 643 SEKLAVKEELQDKNTSPSKSDEKAEWKCHVGGITDKEKTSLGHWESIELAVDQTLSVCVT 702
Query: 694 EILGGGKFYVQQV-----GDQKVASVQQ-QLASLNLQEAPVIGAFNPKKGEIVLAQFSAD 747
E+ FYV GD+ + + + Q + +E P F PK GE A+FS D
Sbjct: 703 EVTSPDLFYVVPAYCKADGDKLLKQLTELQDYCKSCKEQP----FTPKLGEACCARFSGD 758
Query: 748 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 807
W RA+++ + VE V Y DYGN E VP + + PI S P CSL
Sbjct: 759 GRWYRAVVLKVSQSTVE-------VLYADYGNIETVPLSNVLPITDSFLKIPFQTITCSL 811
Query: 808 AYIKIPALEDEYGPEAAEFLNEHTYN 833
A IK + E+ P + L E N
Sbjct: 812 AAIK----KVEWSPLVLDTLKEMLLN 833
Score = 45 (20.9 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 271 LKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDS 323
L A K L WT+ + + D+ FT KVV+ S C++ D+
Sbjct: 415 LCCAQFTGIKPLLGAWTSEAISLMK-QLVKDKVFTVKVVDKESYRCVVELTDA 466
Score = 40 (19.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 541 RIPAVVEYVLSGHRFKVLIPKETCSIAFSFS 571
R+P ++E VL+ FK ++ + S+ S
Sbjct: 110 RLPVLLEMVLTKEHFKKIMFSDLQSLGLKKS 140
>ZFIN|ZDB-GENE-070803-1 [details] [associations]
symbol:tdrd1 "tudor domain containing 1" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030719 "P granule organization" evidence=IMP] [GO:0034584
"piRNA binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] [GO:0043186 "P granule" evidence=ISS] [GO:0031047
"gene silencing by RNA" evidence=IEA;ISS] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0034587 "piRNA
metabolic process" evidence=ISS] [GO:0007281 "germ cell
development" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0007126 "meiosis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865
InterPro:IPR002999 ZFIN:ZDB-GENE-070803-1 GO:GO:0046872
GO:GO:0008270 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0030719 GO:GO:0034584 GeneTree:ENSGT00520000055580 CTD:56165
EMBL:CR932360 IPI:IPI01016891 RefSeq:NP_001157500.1
UniGene:Dr.133744 Ensembl:ENSDART00000066249 GeneID:553522
KEGG:dre:553522 NextBio:20880267 Bgee:F1Q7S6 Uniprot:F1Q7S6
Length = 1176
Score = 157 (60.3 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 52/222 (23%), Positives = 92/222 (41%)
Query: 654 EKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGDQKVAS 713
E S +Q +I+ + + VS G+ ++G V ++ G F + ++ + S
Sbjct: 150 EISVDAQPKRIYRRDLHKKVVSKGSEIKG--------TVIDLRNPGMFSIHCQCEEMIES 201
Query: 714 VQQQLASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEV 772
+++ L + P+ GE+ +FS D +W RA I + V+ V
Sbjct: 202 LKKITQQLQKTYCSSFAQEYKPEVGELCAVKFSLDQNWYRAEI-----QAVDVARKTAGV 256
Query: 773 FYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTY 832
FYID+GN+E V + +RP+ ++ + PP A C +A +K P L + E + +
Sbjct: 257 FYIDFGNEENVALDHIRPLSENIDAVPPFALQCCIAGVK-P-LTGSWTGECCIAVRQLIA 314
Query: 833 NSSNEFRALVEERDSSXXXXXXXXXXXXXHVTLVAVDAEISI 874
S F L D HV+ +D +I
Sbjct: 315 GKSLTFTVLDIMNDGDLLAVDSLVSTLGKHVSTFLIDQSYAI 356
Score = 147 (56.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 44/143 (30%), Positives = 62/143 (43%)
Query: 691 VVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSW 750
VVT + + Q++ + + Q ++ F P G + + FS DN W
Sbjct: 411 VVTHLQSPSEILCQKLENASIIQQLQMNLRVHCSNTAASDDFRPAPGTVCCSLFSEDNQW 470
Query: 751 NRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYI 810
RA ++ S D+ V YID+GN E V N+LRPI L + A CSLA I
Sbjct: 471 YRAKVL------AYSSEDRVCVGYIDFGNSEEVELNRLRPISKELLALATQAIPCSLAGI 524
Query: 811 KIPALEDEYGPEAAEFLNEHTYN 833
K +L D + EA L N
Sbjct: 525 K--SLTDTWSDEAVLMLKHLVCN 545
>UNIPROTKB|I3LDE1 [details] [associations]
symbol:LOC100521234 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016788 "hydrolase activity, acting on ester
bonds" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565
GO:GO:0003676 GO:GO:0016788 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 EMBL:CU655914 RefSeq:XP_003134759.1
UniGene:Ssc.11771 Ensembl:ENSSSCT00000027805 GeneID:100521234
KEGG:ssc:100521234 Uniprot:I3LDE1
Length = 137
Score = 124 (48.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 862 HVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQY 921
HVTL D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+Y
Sbjct: 66 HVTLQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRY 122
Query: 922 GDIQSDDED 930
GD ++DD D
Sbjct: 123 GDFRADDAD 131
>UNIPROTKB|A9CPT4 [details] [associations]
symbol:tdrd1 "Tudor domain-containing protein 1"
species:8090 "Oryzias latipes" [GO:0007281 "germ cell development"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0031047 "gene silencing by RNA" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=ISS]
[GO:0043186 "P granule" evidence=ISS;IDA] [GO:0071546 "pi-body"
evidence=ISS] InterPro:IPR002893 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50865 InterPro:IPR002999 GO:GO:0007275 GO:GO:0007126
GO:GO:0046872 GO:GO:0008270 GO:GO:0007283 GO:GO:0007281
GO:GO:0031047 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 GO:GO:0071546 GO:GO:0034587 eggNOG:NOG267246
CTD:56165 EMBL:AB306932 RefSeq:NP_001116401.1 UniGene:Ola.20092
ProteinModelPortal:A9CPT4 GeneID:100144383 HOVERGEN:HBG108556
Uniprot:A9CPT4
Length = 1133
Score = 151 (58.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/137 (37%), Positives = 65/137 (47%)
Query: 690 VVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQE----APVIGAFNPKKGEIVLAQFS 745
VVV+ F VQ+V + A V Q L L L+E F P G + AQFS
Sbjct: 392 VVVSHFQSPTDFIVQKVEN---AGVIQDL-QLKLREHCSGVETQQDFRPAPGTVCCAQFS 447
Query: 746 ADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLC 805
D W RA ++ EK V YID+GN E V N LRPI P+L + P A C
Sbjct: 448 EDKQWYRAQVLAYSTEKSVCVG------YIDFGNSEEVDLNHLRPISPALLALPKQAISC 501
Query: 806 SLAYIKIPALEDEYGPE 822
LA ++ P +ED + E
Sbjct: 502 ILAGVQ-P-VEDSWSEE 516
Score = 137 (53.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 72/260 (27%), Positives = 107/260 (41%)
Query: 571 SGVRCPGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 630
+GV+ P +E +S+EALL + + + V +V + G + L +VA L+
Sbjct: 724 AGVK-PAGSE-WSSEALLWFQNLVDGAQLLARVVSVSQQGYGV-ELESGGQSVAAALVSQ 780
Query: 631 GLAKLQTSFGSD--RIPDSHLLE-------QAEKSAKSQKLKIWENYVEGEEVSNGAAVE 681
AK + D R P + + QA A + + E+ EE S A
Sbjct: 781 QFAKPSGNLSKDPVRSPTTKQEDLRGGDQSQALTPASNDTQAVCEDGKSEEEPSEVATFS 840
Query: 682 GKQK-------EVLKVVVTEILGGGKFY----VQQVGDQKVASVQQQLA--SLNLQEAPV 728
K E + V ++ FY +Q V QK+ V +LA N Q +
Sbjct: 841 SAWKTAELPLNETFQPCVAAVINPTLFYLLHPIQNVDQQKLQEVMLELALHCSNYQSSSS 900
Query: 729 IGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKL 788
+ P G AQFS D W RA+I+ E E+ + V Y DYGN E VP +++
Sbjct: 901 VDT-RPVPGAACCAQFSVDKIWYRAIIL----EVGEA---EMSVVYADYGNSEKVPVSQI 952
Query: 789 RPIDPSLSSTPPLAQLCSLA 808
PI L P C+LA
Sbjct: 953 LPIPTRLLQLPFKIIRCTLA 972
Score = 127 (49.8 bits), Expect = 0.00051, P = 0.00051
Identities = 47/181 (25%), Positives = 80/181 (44%)
Query: 645 PDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ 704
PDS + E S Q++ + + + + + GA ++G V E G+F+
Sbjct: 127 PDSDNVR--EDSLNIQRIYLKD--LNATKYTKGAEIQG--------AVVEFNSPGRFFFL 174
Query: 705 QVGDQKVASVQQQLASLNLQEAP--VIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPRE 761
D KV + + Q+ P +G + P GE+ QFS D +W R +I +
Sbjct: 175 PE-DPKVMEALMSITA-EXQKXPSSTVGTPYVPCVGEVCSVQFSXDLNWYRGLIQTLAAD 232
Query: 762 KVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGP 821
+ + V YIDYGN E VP +++P++ + P A C A + +P + D +
Sbjct: 233 QKTA-----HVLYIDYGNAENVPVERIKPLNIATKPYCPCAMECQXAGV-VPIV-DSWST 285
Query: 822 E 822
E
Sbjct: 286 E 286
Score = 126 (49.4 bits), Expect = 0.00065, P = 0.00065
Identities = 65/245 (26%), Positives = 99/245 (40%)
Query: 580 ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSF 639
+ +S E + M + I + V +E+++ + G L ++ E E +A+L S
Sbjct: 511 DSWSEECISTMLRMIANKTVNVEIQSAHK-GKALVAIIEGEG-----YSEINVAELLISA 564
Query: 640 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGG 699
DS+ L+Q E++ S + E S Q VL + +
Sbjct: 565 NYAAPADSNTLQQTEETTASAEPPASPPVCEPLVWSCVELPSDGQTVVLST--SAVTSPA 622
Query: 700 KFYVQQVGDQKVASVQQQLASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNA 758
+FY VG V +L Q F PK GE +FS D W RAM+
Sbjct: 623 EFYCC-VGPTTDHQVLMELGVQLKQHCQSDSTYFVPKVGEPCCVKFSGDGKWYRAMVK-- 679
Query: 759 PREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDE 818
E + D +V ++D+G+ +V LR I P L P A C LA +K PA E
Sbjct: 680 -----ELLGDVVKVNFVDFGHNMIVGKGCLRSITPKLLKLPFQAVRCWLAGVK-PA-GSE 732
Query: 819 YGPEA 823
+ EA
Sbjct: 733 WSSEA 737
>POMBASE|SPBC19F8.04c [details] [associations]
symbol:SPBC19F8.04c "nuclease" species:4896
"Schizosaccharomyces pombe" [GO:0004518 "nuclease activity"
evidence=ISM] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565
PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318
PomBase:SPBC19F8.04c GO:GO:0016021 GO:GO:0005739 GO:GO:0016020
GO:GO:0046872 EMBL:CU329671 GO:GO:0003676 GO:GO:0004519
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 HOGENOM:HOG000212133
SUPFAM:SSF50199 OrthoDB:EOG4QG0PC PIR:T39827 RefSeq:NP_596346.1
ProteinModelPortal:O60168 EnsemblFungi:SPBC19F8.04c.1
GeneID:2540556 KEGG:spo:SPBC19F8.04c OMA:QTLHIRL NextBio:20801682
Uniprot:O60168
Length = 230
Score = 128 (50.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 195 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSV-FYPDGET--AKDLAMELVENG 251
++P+AL+AK F ++ ++ VRI+ +D++ L+ V +YP KD+ +++ G
Sbjct: 120 EQPYALEAKEFLHNKLYHKSVRIIPLKIDRYARLVAGVQYYPIPHFFWKKDIGPQMIRKG 179
Query: 252 LAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWT 287
LA E S + K L A ++ AKK +L +W+
Sbjct: 180 LAVVYEGSDGVFCPTKKECLLALEIVAKKKKLSLWS 215
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 97 NFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLP 131
N+ + ++ K + M G V + DG R Y P
Sbjct: 42 NYLNNSTVENRKYKTMFGYVTRVGDGDNFRFYHTP 76
>UNIPROTKB|F1NF10 [details] [associations]
symbol:F1NF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0043186 "P
granule" evidence=IEA] InterPro:IPR002999 GO:GO:0005783
Pfam:PF00567 SMART:SM00333 PROSITE:PS50304 GO:GO:0043186
GeneTree:ENSGT00520000055580 EMBL:AADN02018214 IPI:IPI00593229
Ensembl:ENSGALT00000026969 OMA:CEFVEEV Uniprot:F1NF10
Length = 717
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 63/275 (22%), Positives = 122/275 (44%)
Query: 559 IPKETCSIAF-SFSGVRCPGRN-ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL 616
IP + I V+C + EA ++ +L+R ++ V + G L L
Sbjct: 261 IPSDAHDILLLPMQAVKCSLADVANVPQEATAWFKKAVLERQLKAIVVAKESGGKLLIEL 320
Query: 617 WESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSN 676
++ + + G ++S R D +LL+ A + ++ +L EG+ SN
Sbjct: 321 FDGESKNCRSKAQGGE---RSSKMHVREKDVNLLQPAAERERASELLA----SEGKVSSN 373
Query: 677 GAAVEGK-QKEVLKVVVTEILGGGKFYVQQVGDQ-KVASVQQQLASLNLQEAPVIGAFNP 734
A+ K ++E+ ++ E+ FYVQ D+ ++ S+ ++L + P G
Sbjct: 374 KDALLNKVEEEMQSLLSVEMDAESDFYVQLASDEAQLHSISERLKDEMPAKIPC-GELL- 431
Query: 735 KKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPS 794
+ G+++ A +S D+ W RA++ +EK + + YIDYGN +V +++ +
Sbjct: 432 QAGDLICALYSDDSLWYRAVV----KEKAS--DHLISIQYIDYGNTSVVDVDQVCRLPED 485
Query: 795 LSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNE 829
L S P + C L ++ D + +AA + E
Sbjct: 486 LESIPAIGVHCFLGGLECKRSTD-WAEKAALYFTE 519
>UNIPROTKB|E1BGM7 [details] [associations]
symbol:TDRD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043186 "P granule" evidence=IEA] [GO:0007281 "germ
cell development" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006021 InterPro:IPR002999 GO:GO:0005783 GO:GO:0003676
GO:GO:0007281 GO:GO:0016788 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 GO:GO:0043186
GeneTree:ENSGT00520000055580 CTD:221400 OMA:VYVSHIN
EMBL:DAAA02055162 IPI:IPI00695927 RefSeq:NP_001179259.1
UniGene:Bt.57460 PRIDE:E1BGM7 Ensembl:ENSBTAT00000013158
GeneID:512705 KEGG:bta:512705 NextBio:20870522 Uniprot:E1BGM7
Length = 2092
Score = 131 (51.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 60/226 (26%), Positives = 96/226 (42%)
Query: 618 ESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLK--IWENYVEGEEVS 675
+S T ++ L + + S D L AE S K+ KL+ + E + +
Sbjct: 1224 QSSTKTNLVTLHQDSVGNKNNQVSPLTTDKKLESSAEPSLKATKLEASLSERKLR-DSCD 1282
Query: 676 NGAAV---EGKQKEVLK-----VVVTEILGGGKFYVQQVGDQKVASVQQQLASLN-LQEA 726
G + E +K ++ V V+ I FYVQ D+ A + LN +
Sbjct: 1283 KGLPLKISEFPKKAIMPGFKTTVYVSHINDLSDFYVQLTEDE--AEIDHLSERLNDTRTR 1340
Query: 727 PVIGAFNP-KKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPY 785
P A P ++G+++ A F DN W RA +V P+ +ND V +IDYGN +V
Sbjct: 1341 PEYYAGPPLQRGDVICAVFPEDNLWYRA-VVKEPQ-----LNDLLSVQFIDYGNVSVVHT 1394
Query: 786 NKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHT 831
NK+ +D P L CSL +P + + E + ++ T
Sbjct: 1395 NKIGKLDRVNVLLPGLCIPCSLKGCGVPGILNH--KEVMHYFSQRT 1438
Score = 69 (29.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 580 ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRT---NVAVILLEAGLAKLQ 636
E +S EA+ ++ +L +++ I V + L ESRT N++ ++ +AG AK Q
Sbjct: 610 ENWSQEAISFFKKTVLHKELVIHVLDKQDNQYIIEILDESRTGEENISKVMAQAGFAKYQ 669
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 6/23 (26%), Positives = 15/23 (65%)
Query: 815 LEDEYGPEAAEFLNEHTYNSSNE 837
L DE+G A + ++ +T++ ++
Sbjct: 1458 LADEHGIIAEDMVSRYTFSEKSQ 1480
>UNIPROTKB|O60522 [details] [associations]
symbol:TDRD6 "Tudor domain-containing protein 6"
species:9606 "Homo sapiens" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007281 "germ cell development" evidence=IEA]
[GO:0043186 "P granule" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] InterPro:IPR002999 GO:GO:0005783
GO:GO:0007275 GO:GO:0007283 GO:GO:0007281 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0033391 GO:GO:0043186
EMBL:AL591242 EMBL:AK125838 EMBL:AK131455 EMBL:BX648686
EMBL:AF039442 IPI:IPI00030153 IPI:IPI00954510 RefSeq:NP_001010870.1
RefSeq:NP_001161831.1 UniGene:Hs.656983 ProteinModelPortal:O60522
SMR:O60522 STRING:O60522 PaxDb:O60522 PRIDE:O60522
Ensembl:ENST00000316081 Ensembl:ENST00000544460 GeneID:221400
KEGG:hsa:221400 UCSC:uc003oyj.3 CTD:221400 GeneCards:GC06P046702
H-InvDB:HIX0025021 HGNC:HGNC:21339 HPA:HPA035710 MIM:611200
neXtProt:NX_O60522 PharmGKB:PA134945900 eggNOG:NOG327358
HOGENOM:HOG000154540 HOVERGEN:HBG059095 InParanoid:O60522
OMA:VYVSHIN OrthoDB:EOG4N04D2 GenomeRNAi:221400 NextBio:91317
ArrayExpress:O60522 Bgee:O60522 CleanEx:HS_TDRD6
Genevestigator:O60522 GermOnline:ENSG00000180113 Uniprot:O60522
Length = 2096
Score = 140 (54.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 690 VVVTEILGGGKFYVQQVGDQ-KVASVQQQLASLNLQEAPVIGAFNP-KKGEIVLAQFSAD 747
V V+ I FYVQ + D+ +++ + ++L S+ + +G P ++G+++ A F D
Sbjct: 1309 VYVSHINDLSDFYVQLIEDEAEISHLSERLNSVKTRPEYYVGP--PLQRGDMICAVFPED 1366
Query: 748 NSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSL 807
N W RA+I K + ND V +IDYGN +V NK+ +D + P L CSL
Sbjct: 1367 NLWYRAVI------KEQQPNDLLSVQFIDYGNVSVVHTNKIGRLDLVNAILPGLCIHCSL 1420
Query: 808 AYIKIP 813
++P
Sbjct: 1421 QGFEVP 1426
Score = 43 (20.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 25 GDKNVAMLVVSEGWAKVKE 43
G++N++ ++ G+AK +E
Sbjct: 652 GEENISKVIAQAGYAKYQE 670
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 944 859 0.00083 122 3 11 22 0.43 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 621 (66 KB)
Total size of DFA: 379 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 68.06u 0.12s 68.18t Elapsed: 00:00:03
Total cpu time: 68.09u 0.12s 68.21t Elapsed: 00:00:03
Start: Sat May 11 09:04:36 2013 End: Sat May 11 09:04:39 2013