Citrus Sinensis ID: 002275
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 944 | 2.2.26 [Sep-21-2011] | |||||||
| P98205 | 1107 | Phospholipid-transporting | yes | no | 1.0 | 0.852 | 0.878 | 0.0 | |
| P70704 | 1149 | Probable phospholipid-tra | yes | no | 0.955 | 0.785 | 0.382 | 1e-176 | |
| Q29449 | 1149 | Probable phospholipid-tra | yes | no | 0.955 | 0.785 | 0.379 | 1e-173 | |
| Q9Y2Q0 | 1164 | Probable phospholipid-tra | yes | no | 0.955 | 0.774 | 0.374 | 1e-173 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | no | 0.954 | 0.716 | 0.377 | 1e-168 | |
| P98200 | 1148 | Probable phospholipid-tra | no | no | 0.949 | 0.780 | 0.369 | 1e-166 | |
| Q9NTI2 | 1148 | Probable phospholipid-tra | no | no | 0.939 | 0.772 | 0.372 | 1e-164 | |
| P39524 | 1355 | Probable phospholipid-tra | yes | no | 0.956 | 0.666 | 0.366 | 1e-164 | |
| Q8TF62 | 1192 | Probable phospholipid-tra | no | no | 0.951 | 0.753 | 0.348 | 1e-160 | |
| P98198 | 1209 | Probable phospholipid-tra | no | no | 0.957 | 0.747 | 0.351 | 1e-160 |
| >sp|P98205|ALA2_ARATH Phospholipid-transporting ATPase 2 OS=Arabidopsis thaliana GN=ALA2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1743 bits (4514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/944 (87%), Positives = 890/944 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ET
Sbjct: 901 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETN 944
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Requires an interaction with a protein of the ALIS family for activity. Specific for phosphatidylserine and has no activity with lysolipid, phosphatidylcholine or phosphatidylethanolamine. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|P70704|AT8A1_MOUSE Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 619 bits (1596), Expect = e-176, Method: Compositional matrix adjust.
Identities = 354/925 (38%), Positives = 541/925 (58%), Gaps = 23/925 (2%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + K WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L+ + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LHLHYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGLL 417
A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D LL
Sbjct: 390 MARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSSQFGDEKTFNDPSLL 449
Query: 418 NAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474
+ + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 450 DNLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVFT 508
Query: 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-Y 533
+ + I G +YE+L LEFTS RKRMSVVV+ SG + L KGAD I
Sbjct: 509 GRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVR-TPSGKLRLYCKGADTVIYERL 567
Query: 534 AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
A + ++ +EQ++ GLRTLC A E+ E +++EW ++ AS+++ +R ++ E
Sbjct: 568 AETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRASTSVQNRLLKLEE 627
Query: 594 VCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
+ +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC +
Sbjct: 628 SYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCRLL 687
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKA 712
+ ++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 688 --KRNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQY 745
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
F +LA+ + ICCRV+P QK+++VE++ K TLAIGDG NDV MIQ A +GVGISG
Sbjct: 746 FLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGISG 805
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I+F+F++
Sbjct: 806 NEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFVN 865
Query: 832 GLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPST 890
G SG LF + YNV +T++P L I ++ + ++++P++ Q N
Sbjct: 866 GFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPELYKTSQNALDFNTKV 925
Query: 891 FAGWFGRSLFHAIVAFVISIHVYAY 915
F LFH+++ F + Y
Sbjct: 926 FWVHCLNGLFHSVILFWFPLKALQY 950
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q29449|AT8A1_BOVIN Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 610 bits (1573), Expect = e-173, Method: Compositional matrix adjust.
Identities = 351/925 (37%), Positives = 535/925 (57%), Gaps = 23/925 (2%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 215 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + + WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LNLNYGGANNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGLL 417
A + ++ +L QV+YI +DKTGTLT N M F++C I G+ YG + GD D LL
Sbjct: 390 MARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSLL 449
Query: 418 NAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474
+ + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 450 ENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVFT 508
Query: 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-Y 533
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 509 GRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGKLRLYCKGADTVIYDRL 567
Query: 534 AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++ E
Sbjct: 568 AETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLEE 627
Query: 594 VCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
+ +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 628 SYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKL- 686
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKA 712
++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 -RRKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQY 745
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
F +LA+ + ICCRV+P QK+++VE++ K TLAIGDG NDV MIQ A +GVGISG
Sbjct: 746 FLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGISG 805
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I+F+F++
Sbjct: 806 NEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRGSKCILYCFYKNIVLYIIEIWFAFVN 865
Query: 832 GLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPST 890
G SG LF + YNV +T++P L I ++ + ++++P++ Q N
Sbjct: 866 GFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKEYMLKYPELYKTSQNALDFNTKV 925
Query: 891 FAGWFGRSLFHAIVAFVISIHVYAY 915
F LFH+++ F + Y
Sbjct: 926 FWVHCLNGLFHSVILFWFPLKALQY 950
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 610 bits (1572), Expect = e-173, Method: Compositional matrix adjust.
Identities = 352/940 (37%), Positives = 539/940 (57%), Gaps = 38/940 (4%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
IV + + +P DL+ + +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 EIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDVDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + K WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN---------------- 405
A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG+
Sbjct: 390 MARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGHVPEPEDYGCSPDEWQN 449
Query: 406 -ETGD--ALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+ GD D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 450 SQFGDEKTFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + + ++ I+ + D +L R T+ + D A ++D
Sbjct: 688 KQETAINIGHSCKLL--KKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYK 865
Query: 817 SLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 875
++++ I+I+F+F++G SG LF + YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 876 ILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY 915
+ Q N F LFH+++ F + Y
Sbjct: 926 LYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQY 965
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 356/943 (37%), Positives = 544/943 (57%), Gaps = 42/943 (4%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I +ND S + + N +S KY+ FLPK L EQFS++ N +FL A +Q IT
Sbjct: 145 RQIILND--YSANHFLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFFLFTAVVQQIPGIT 202
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PVN +T GP++ + +VS KE +D R D++ NE +V++ Q +D+ VG
Sbjct: 203 PVNRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGTGFVEKQWKDVVVG 262
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLHK 181
+IV + P DLVL+ +S+P+G+CY+ETA LDGET+LK + +P + L +
Sbjct: 263 DIVKIVSETFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALPETAGLLKPVELGQ 322
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G ++ P+ ++ FD L+LLP D ++ PL+ +L+ LRNT W G+ V+T
Sbjct: 323 LSGEVKSEQPNNNLYTFDATLKLLPS--DREL-PLSPDQLLLRGAQLRNTPWVYGIVVFT 379
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA--GNVWKDTEARKQW 299
G+E+KL K T+V+ ++ + +F+ I V + ++ + +
Sbjct: 380 GHESKLMKNTTETPIKRTSVEKQVN--SQILFLLCIFVFLCFASSLGALIHRSVYGSALS 437
Query: 300 YVLYPQEFP--WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
YV Y +++ L L F +L S ++PIS+ V+ +LV+ + A+ I D +M + ET
Sbjct: 438 YVKYTSNRAGMFFKGL---LTFWILYSNLVPISLFVTFELVRYIQAQLISSDLDMYNEET 494
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN------------ 405
DTP+ +++ E+L QV YI +DKTGTLT N+M FR+C I G+ Y +
Sbjct: 495 DTPAACRTSSLVEELGQVGYIFSDKTGTLTRNQMEFRQCTIAGVAYADVIPEDRQFTSED 554
Query: 406 -ETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKA-GAILYKAQSQDEE 460
++ + D L S + + +FL V+++C+TVIP ++ +I Y+A S DE
Sbjct: 555 LDSDMYIYDFDTLKENLKHSENASLIHQFLLVLSICHTVIPEYDESTNSIKYQASSPDEG 614
Query: 461 ALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNIS 520
ALV AA + + + ++ + G YE+L EF S RKRMS+V + C G I
Sbjct: 615 ALVKGAASIGYKFLARKPHLVTVSIFGKDESYELLHICEFNSTRKRMSIVFR-CPDGKIR 673
Query: 521 LLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKE 579
L KGAD I+ A +T + +E Y+ +GLRTLC+A REV EDEYQ WS +F+
Sbjct: 674 LYVKGADTVIMERLASDNPYLQTTIHHLEDYATVGLRTLCIAMREVPEDEYQRWSTVFET 733
Query: 580 ASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDK 639
A+S+L+DR ++ + + +E DL +LG TAIEDRLQDGVP+TI TL+ AGI W+LTGD+
Sbjct: 734 AASSLVDRAQKLMDAAEEIEKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDR 793
Query: 640 QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM---RITTSEPKDVAFV 696
Q TAI I +SC I E G L+ ++ +T++ S+ L ++ TT + +A V
Sbjct: 794 QETAINIGMSCKLID-EDMG-LVIVNEETKEATAESVMAKLSSIYRNEATTGNVESMALV 851
Query: 697 VDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGG 754
+DG +L AL + F ELA L R ICCRV+P QKA +V+++K + LAIGDG
Sbjct: 852 IDGVSLTYALDFSLERRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGA 911
Query: 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSF 814
NDV MIQ A +GVGISG EGLQA R++D+SI +F +LK+L+LVHG + Y R + L YSF
Sbjct: 912 NDVPMIQAAHVGVGISGMEGLQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSF 971
Query: 815 YKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSI-PVLVSTIDKDLSEGTVMQH 873
YK++ + Q +++F + SG +F S S+ YNV +T + PV++ D+ +S G + Q+
Sbjct: 972 YKNIALYMTQFWYAFCNAFSGQVIFESWSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQY 1031
Query: 874 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE 916
PQ+ Q N F W +H+++ F+ SI V+ Y+
Sbjct: 1032 PQLYQLGQRSEFFNLKRFWSWITNGFYHSLLLFLCSIAVFYYD 1074
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98200|AT8A2_MOUSE Probable phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust.
Identities = 351/949 (36%), Positives = 534/949 (56%), Gaps = 53/949 (5%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ +C NR+S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RIIYLNQSHLNK--FCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+ I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL +S+PQG+CYVETA LDGET+LK R + M ++L K
Sbjct: 134 DIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQTRDVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L L +L+ LRNT+W GV VYT
Sbjct: 194 LSGRIECEGPNRHLYDFTGNLHL----DGKSSVALGPDQILLRGTQLRNTQWVFGVVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G+++KL K + V+ + + +F +V+ +V W + K WY+
Sbjct: 250 GHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKSWYI 309
Query: 302 ----LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
F Y LL F +L + +IPIS+ V+L++VK A FI+WD +M E
Sbjct: 310 KKMDTNSDNFG-YNLLT----FIILYNNLIPISLLVTLEVVKYTQALFINWDMDMYYIEN 364
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG------------- 404
DTP+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG
Sbjct: 365 DTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREQSSDD 424
Query: 405 --------NETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYK 453
N++ D D LL I P + FLT++AVC+TV+P K I+Y+
Sbjct: 425 FCRMTSCTNDSCD-FNDPRLLKNIEDQHPTAPCIQEFLTLLAVCHTVVPEKD-GDEIIYQ 482
Query: 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD 513
A S DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+
Sbjct: 483 ASSPDEAALVKGAKKLGFVFTGRTPYSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR- 541
Query: 514 CHSGNISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEY 570
SG + L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY
Sbjct: 542 LPSGQLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEY 599
Query: 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 630
+EW +++EAS L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I
Sbjct: 600 EEWLKVYQEASIILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEI 659
Query: 631 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690
W+LTGDKQ TAI I SC +S LL D + D ++ + + +
Sbjct: 660 KIWVLTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKE 717
Query: 691 KDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTL 748
DVA ++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TL
Sbjct: 718 NDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITL 777
Query: 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAF 808
AIGDG NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR
Sbjct: 778 AIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTK 837
Query: 809 LSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSE 867
Y FYK++++ I+++F+F++G SG LF + YNV +T++P I ++ ++
Sbjct: 838 CILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQ 897
Query: 868 GTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE 916
++++ PQ+ Q N F G +L H+++ F + + ++
Sbjct: 898 ESMLRFPQLYRITQNAEGFNTKVFWGHCINALVHSLILFWVPMKALEHD 946
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9NTI2|AT8A2_HUMAN Probable phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 579 bits (1493), Expect = e-164, Method: Compositional matrix adjust.
Identities = 349/938 (37%), Positives = 530/938 (56%), Gaps = 51/938 (5%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ + N++S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RTIYLNQPHLNK--FRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PLI I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL+ +S+PQ +CYVETA LDGET+LK R + M E+L K
Sbjct: 134 DIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L + L +L+ LRNT+W G+ VYT
Sbjct: 194 LSGTIECEGPNRHLYDFTGNLNL----DGKSLVALGPDQILLRGTQLRNTQWVFGIVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL K + V+ + + +F +V+ +V W + K WY+
Sbjct: 250 GHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRSHGEKNWYI 309
Query: 302 ----LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
F Y LL F +L + +IPIS+ V+L++VK A FI+WD +M
Sbjct: 310 KKMDTTSDNFG-YNLLT----FIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIGN 364
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN------------ 405
DTP+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG+
Sbjct: 365 DTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREPSSDD 424
Query: 406 ------ETGDA--LKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKA 454
D+ D LL I P + FLT++AVC+TV+P K I+Y+A
Sbjct: 425 FCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQEFLTLLAVCHTVVPEKD-GDNIIYQA 483
Query: 455 QSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514
S DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+
Sbjct: 484 SSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR-T 542
Query: 515 HSGNISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEYQ 571
SG + L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY+
Sbjct: 543 PSGRLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYE 600
Query: 572 EWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631
EW +++EAS+ L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I
Sbjct: 601 EWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIK 660
Query: 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691
W+LTGDKQ TAI I SC +S LL D + D ++ + + +
Sbjct: 661 IWVLTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKEN 718
Query: 692 DVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLA 749
DVA ++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TLA
Sbjct: 719 DVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLA 778
Query: 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFL 809
IGDG NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR
Sbjct: 779 IGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKC 838
Query: 810 SQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEG 868
Y FYK++++ I+++F+F++G SG LF + YNV +T++P I ++ ++
Sbjct: 839 ILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQE 898
Query: 869 TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAF 906
++++ PQ+ Q G N F G +L H+++ F
Sbjct: 899 SMLRFPQLYKITQNGEGFNTKVFWGHCINALVHSLILF 936
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P39524|ATC3_YEAST Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 347/946 (36%), Positives = 536/946 (56%), Gaps = 43/946 (4%)
Query: 3 RYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
R I+IND + Y N +S KY FLPK L+++FS++ N +FL + +Q +
Sbjct: 183 RVIHINDSLANSSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQQVPHV 242
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQ--DI 119
+P N +T G L+ + VSA KE +D R SDK+ N + + ++ + DI
Sbjct: 243 SPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEAHDDFVEKRWIDI 302
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG-MDFEL 178
RVG+I+ ++ + +P D +++ +S+P+G+CY+ETA LDGET+LK + +D +
Sbjct: 303 RVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKFIDVKT 362
Query: 179 LHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238
L + G + P+ + ++G + L ++ PL+ IL+ LRNT W G+
Sbjct: 363 LKNMNGKVVSEQPNSSLYTYEGTMTL-----NDRQIPLSPDQMILRGATLRNTAWIFGLV 417
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQ 298
++TG+ETKL K TAV+ +I++ A+F ++V+I++ + GNV T K
Sbjct: 418 IFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTV-LIVLILISSIGNVIMSTADAKH 476
Query: 299 WYVLYPQEFPWYELLVIP-LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
LY + L L F +L S ++PIS+ V+++L+K A I D ++ +T
Sbjct: 477 LSYLYLEGTNKAGLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDLYYEKT 536
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY-------------- 403
DTP+ +++ E+L Q+EYI +DKTGTLT N M F+ C I G Y
Sbjct: 537 DTPTVVRTSSLVEELGQIEYIFSDKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKTATVED 596
Query: 404 GNETG----DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
G E G D LK L + SP + FLT++A C+TVIP G+I Y+A S DE
Sbjct: 597 GIEVGYRKFDDLKK-KLNDPSDEDSPIINDFLTLLATCHTVIPEFQSDGSIKYQAASPDE 655
Query: 460 EALVHAAAQL--HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 517
ALV A L ++ N+ + ++ G +Y++L EF S RKRMS + + G
Sbjct: 656 GALVQGGADLGYKFIIRKPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFR-FPDG 714
Query: 518 NISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575
+I L KGAD IL A Q + +E Y+ GLRTLCLA R++ E EY+EW+
Sbjct: 715 SIKLFCKGADTVILERLDDEANQYVEATMRHLEDYASEGLRTLCLAMRDISEGEYEEWNS 774
Query: 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635
++ EA++TL +R ++ E +E +L ++G TAIED+LQDGVPETI TL++AGI W+L
Sbjct: 775 IYNEAATTLDNRAEKLDEAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKIWVL 834
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS-LERV--LLTMRITTSEPKD 692
TGD+Q TAI I +SC +S + LL I+ +T D+ R+ LE++ L +++T +
Sbjct: 835 TGDRQETAINIGMSCRLLSEDM--NLLIINEETRDDTERNLLEKINALNEHQLSTHDMNT 892
Query: 693 VAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAI 750
+A V+DG +L AL+ +A L + ICCRV+P QKA +V+++K LAI
Sbjct: 893 LALVIDGKSLGFALEPELEDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLAI 952
Query: 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 810
GDG NDV MIQ A +GVGISG EG+QAAR+AD ++G+F+FLK+L+LVHG +SY R +
Sbjct: 953 GDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISVAI 1012
Query: 811 QYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTS-IPVLVSTIDKDLSEGT 869
YSFYK+ + Q ++ F + SG S+ S ++ YN+F+T P ++ D+ +S
Sbjct: 1013 LYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRL 1072
Query: 870 VMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY 915
+ ++PQ+ Q G+ + F GW FH+ + F+ +I +Y Y
Sbjct: 1073 LERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRY 1118
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids (Potential). Seems to be involved in ribosome assembly. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q8TF62|AT8B4_HUMAN Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 339/972 (34%), Positives = 533/972 (54%), Gaps = 74/972 (7%)
Query: 1 MKRYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWS 59
++R + ND E ++ Y NR+ KY ++ FLP NL+EQF R N YFL + LQL
Sbjct: 11 VERIVKANDREYNEKFQYADNRIHTSKYNILTFLPINLFEQFQRVANAYFLCLLILQLIP 70
Query: 60 LITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDI 119
I+ + +T PL+ + ++A K+A DDY R+ SD + N ++ V+ + + ++
Sbjct: 71 EISSLTWFTTIVPLVLVITMTAVKDATDDYFRHKSDNQVNNRQSEVLINSKLQNEKWMNV 130
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR--LIPAACMGMDFE 177
+VG+I+ L N V DL+L+ +S+P G+CYVETA LDGET+LK R L + +G D
Sbjct: 131 KVGDIIKLENNQFVAADLLLLSSSEPHGLCYVETAELDGETNLKVRHALSVTSELGADIS 190
Query: 178 LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGV 237
L G++ C P+ + +F G L + L + IL+ C LRNT W G+
Sbjct: 191 RLAGFDGIVVCEVPNNKLDKFMGILSW-----KDSKHSLNNEKIILRGCILRNTSWCFGM 245
Query: 238 AVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK 297
++ G +TKL G + K T++D +++ L IF F I + I+L ++W+ +
Sbjct: 246 VIFAGPDTKLMQNSGKTKFKRTSIDRLMNTLVLWIFGFLICLGIILAIGNSIWESQTGDQ 305
Query: 298 QWYVLYPQEFPWYELLVIPLRFE---LLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID 354
L+ E + L F ++ + ++PIS+ VS+++++ ++ FI+WD +M
Sbjct: 306 FRTFLFWNEGEKSSVFSGFLTFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDRKMYY 365
Query: 355 PETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALK-- 412
P+ A T ++E+L Q+EYI +DKTGTLT+N M F+RC I G YG E D L
Sbjct: 366 SRKAIPAVARTTTLNEELGQIEYIFSDKTGTLTQNIMTFKRCSINGRIYG-EVHDDLDQK 424
Query: 413 -------------------------DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKA 447
D L+ +I G P V FL ++A+C+TV+ ++ A
Sbjct: 425 TEITQEKEPVDFSVKSQADREFQFFDHHLMESIKMGDPKVHEFLRLLALCHTVMSEENSA 484
Query: 448 GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRM 507
G ++Y+ QS DE ALV AA + ++ + I+ G+++ Y++L L+F + RKRM
Sbjct: 485 GELIYQVQSPDEGALVTAARNFGFIFKSRTPETITIEELGTLVTYQLLAFLDFNNTRKRM 544
Query: 508 SVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV--EAVEQYSQLGLRTLCLAWREV 565
SV+V++ G I L SKGAD + H + + + + +++ GLRTL +A+R++
Sbjct: 545 SVIVRN-PEGQIKLYSKGADTILFEKLHPSNEVLLSLTSDHLSEFAGEGLRTLAIAYRDL 603
Query: 566 EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625
++ ++EW M ++A++ +R+ RIA + + +E DL +LG TA+ED+LQ+GV ET+ +L
Sbjct: 604 DDKYFKEWHKMLEDANAATEERDERIAGLYEEIERDLMLLGATAVEDKLQEGVIETVTSL 663
Query: 626 RKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV------------- 672
A I W+LTGDKQ TAI I +CN ++ + + I G EV
Sbjct: 664 SLANIKIWVLTGDKQETAINIGYACNMLTDD-MNDVFVIAGNNAVEVREELRKAKQNLFG 722
Query: 673 -----------CRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILS 720
C +++ L + + D A +++G +L AL+ + ELA +
Sbjct: 723 QNRNFSNGHVVCEKKQQLELDSIVEETITGDYALIINGHSLAHALESDVKNDLLELACMC 782
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYR---TLAIGDGGNDVRMIQKADIGVGISGREGLQA 777
+T ICCRVTP QKAQ+VEL+K YR TLAIGDG NDV MI+ A IGVGISG+EGLQA
Sbjct: 783 KTVICCRVTPLQKAQVVELVKK--YRNAVTLAIGDGANDVSMIKSAHIGVGISGQEGLQA 840
Query: 778 ARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTS 837
A+DYS +FR+L+RL+LVHGR+SY R Y FYK+ + +F F G S +
Sbjct: 841 VLASDYSFAQFRYLQRLLLVHGRWSYFRMCKFLCYFFYKNFAFTLVHFWFGFFCGFSAQT 900
Query: 838 LFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG 896
+++ + +N+ YTS+PVL I D+D+S+ + PQ+ Q L N F
Sbjct: 901 VYDQWFITLFNIVYTSLPVLAMGIFDQDVSDQNSVDCPQLYKPGQLNLLFNKRKFFICVL 960
Query: 897 RSLFHAIVAFVI 908
++ ++V F I
Sbjct: 961 HGIYTSLVLFFI 972
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98198|AT8B2_HUMAN Probable phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 342/974 (35%), Positives = 541/974 (55%), Gaps = 70/974 (7%)
Query: 2 KRYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+R ND E ++ Y +N + KY ++ FLP NL+EQF N YFL + LQL
Sbjct: 32 ERRARANDREYNEKFQYASNCIKTSKYNILTFLPVNLFEQFQEVANTYFLFLLILQLIPQ 91
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
I+ ++ +T PL+ + ++A K+A DDY R+ SD + N ++ V+ GI + Q ++
Sbjct: 92 ISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLINGILQQEQWMNVC 151
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELL 179
VG+I+ L N V DL+L+ +S+P G+CY+ETA LDGET++K R IP D L
Sbjct: 152 VGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTSELGDISKL 211
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
K G + C P+ + +F G L + + PL+ +N +L+ C LRNTEW G+ +
Sbjct: 212 AKFDGEVICEPPNNKLDKFSGTL-----YWKENKFPLSNQNMLLRGCVLRNTEWCFGLVI 266
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWK-DTEARKQ 298
+ G +TKL G + K T++D +++ L IF F + + ++L +W+ + R Q
Sbjct: 267 FAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGMRFQ 326
Query: 299 WYVLYPQ--EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPE 356
Y+ + + + ++ + + ++ + ++PIS+ VS+++++ ++ FI+WD +M +
Sbjct: 327 VYLPWDEAVDSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMFCMK 386
Query: 357 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN---------ET 407
TP+ A T ++E+L QVEYI +DKTGTLT+N M+F +C I G YG+ E
Sbjct: 387 KRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFNKCSINGHSYGDVFDVLGHKAEL 446
Query: 408 GDALK-----------------DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 450
G+ + D LL A+ G P F ++++C+TV+ + G +
Sbjct: 447 GERPEPVDFSFNPLADKKFLFWDPSLLEAVKIGDPHTHEFFRLLSLCHTVMSEEKNEGEL 506
Query: 451 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 510
YKAQS DE ALV AA V ++ + + G+ + Y++L L+F + RKRMSV+
Sbjct: 507 YYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHEMGTAITYQLLAILDFNNIRKRMSVI 566
Query: 511 VKDCHSGNISLLSKGADEAILPYAHAGQQT--RTFVEAVEQYSQLGLRTLCLAWREVEED 568
V++ G I L KGAD +L H Q T ++ + +Y+ GLRTL LA+++++E+
Sbjct: 567 VRN-PEGKIRLYCKGADTILLDRLHHSTQELLNTTMDHLNEYAGEGLRTLVLAYKDLDEE 625
Query: 569 EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628
Y+EW+ +AS RE R+A + + +E+++ +LG TAIED+LQ GVPETI L A
Sbjct: 626 YYEEWAERRLQASLAQDSREDRLASIYEEVENNMMLLGATAIEDKLQQGVPETIALLTLA 685
Query: 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM----- 683
I W+LTGDKQ TA+ I SC ++ + ++ + G T EV L + M
Sbjct: 686 NIKIWVLTGDKQETAVNIGYSCKMLT-DDMTEVFIVTGHTVLEVREELRKAREKMMDSSR 744
Query: 684 ----------RITTSEPKDV--------AFVVDGWALEIALK-HYRKAFTELAILSRTAI 724
++++S+ V A V++G +L AL+ F E A + I
Sbjct: 745 SVGNGFTYQDKLSSSKLTSVLEAVAGEYALVINGHSLAHALEADMELEFLETACACKAVI 804
Query: 725 CCRVTPSQKAQLVELLKSCDYR---TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781
CCRVTP QKAQ+VEL+K Y+ TLAIGDG NDV MI+ A IGVGISG+EG+QA A+
Sbjct: 805 CCRVTPLQKAQVVELVKK--YKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLAS 862
Query: 782 DYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNS 841
DYS +F+FL+RL+LVHGR+SY R Y FYK+ + +F F G S ++++
Sbjct: 863 DYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQ 922
Query: 842 VSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
+ YN+ YTS+PVL + D+D+ E M++P++ Q L N F + ++
Sbjct: 923 YFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIY 982
Query: 901 HAIVAFVISIHVYA 914
+++ F I V+A
Sbjct: 983 TSVLMFFIPYGVFA 996
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 944 | ||||||
| 356543847 | 1107 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.852 | 0.884 | 0.0 | |
| 356549902 | 1106 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.853 | 0.882 | 0.0 | |
| 225446426 | 1105 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.854 | 0.905 | 0.0 | |
| 302143322 | 1135 | unnamed protein product [Vitis vinifera] | 1.0 | 0.831 | 0.877 | 0.0 | |
| 224132912 | 1107 | aminophospholipid ATPase [Populus tricho | 1.0 | 0.852 | 0.887 | 0.0 | |
| 334188194 | 1107 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.852 | 0.878 | 0.0 | |
| 334188192 | 1139 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.828 | 0.876 | 0.0 | |
| 449478968 | 1103 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 1.0 | 0.855 | 0.873 | 0.0 | |
| 449438125 | 1112 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 1.0 | 0.848 | 0.866 | 0.0 | |
| 297794981 | 1096 | hypothetical protein ARALYDRAFT_356659 [ | 0.988 | 0.851 | 0.868 | 0.0 |
| >gi|356543847|ref|XP_003540371.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1774 bits (4596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 835/944 (88%), Positives = 898/944 (95%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSDKKANEKEVWVVK+GIKK IQ+QD+
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIQAQDVH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+ACMG+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACMGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K WY
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAA++LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAASRLHMVYFNKSGNI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LE+KF+ S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEVKFSTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LLSIDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HAIV FVISIH YA++KSEMEEVSMVALSGCIWLQAFVV +ET
Sbjct: 901 HAIVVFVISIHAYAFDKSEMEEVSMVALSGCIWLQAFVVTMETN 944
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549902|ref|XP_003543329.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1771 bits (4588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 833/944 (88%), Positives = 896/944 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSD KANEKEVWVVK+GIKK IQ+QDI
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDNKANEKEVWVVKKGIKKHIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+AC+G+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACVGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K WY
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAAA+LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAAARLHMVYFNKSGNI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LE+KFN S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYAHAG+QT
Sbjct: 481 LEVKFNTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYAHAGKQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETI+TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIKTLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLLIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQILFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVLDKDLSEKTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HAIV FVISIH YAY+KSEMEEVSMVALSGCIW+QAFVV +ET
Sbjct: 901 HAIVVFVISIHAYAYDKSEMEEVSMVALSGCIWIQAFVVTMETN 944
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446426|ref|XP_002276115.1| PREDICTED: phospholipid-transporting ATPase 2-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1770 bits (4584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 855/944 (90%), Positives = 904/944 (95%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLG AGNVWKDTEA KQWY
Sbjct: 241 TGNETKLGMSRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEAVKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP++ PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD +MID ET TP
Sbjct: 301 VLYPKKGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNQMIDQETSTP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN MIFRRCCIGGIFYGNE+GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENIMIFRRCCIGGIFYGNESGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGSPDVI+FLTVMA+CNTVIP KSK GAI YKAQSQDE+ALV AAA+LHMV VNKNA+
Sbjct: 421 SSGSPDVIQFLTVMALCNTVIPVKSKTGAISYKAQSQDEDALVQAAARLHMVFVNKNANT 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI FN S++QYE+L+TLEFTSDRKRMSVVVKDC +G I LLSKGADEAI+PYA AGQQT
Sbjct: 481 LEINFNASIIQYEVLDTLEFTSDRKRMSVVVKDCQNGKIFLLSKGADEAIIPYACAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RTF EAVEQYSQLGLRTLCLAWRE++EDEY++WSLMFKEA+STL+DREWR+AEVCQRLEH
Sbjct: 541 RTFTEAVEQYSQLGLRTLCLAWRELKEDEYRDWSLMFKEANSTLVDREWRLAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL I+GKTEDEV RSL+RVLLTMRITTSEPKDVAFV+DGWALEIALKHYRKAFT+LAILS
Sbjct: 661 LLLINGKTEDEVGRSLDRVLLTMRITTSEPKDVAFVIDGWALEIALKHYRKAFTDLAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTA+CCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTALCCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSIPVLVSVLDKDLSEKTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HAIV FVISIH YAYEKSEMEEVSMVALSGCIWLQAFVV +ET
Sbjct: 901 HAIVVFVISIHAYAYEKSEMEEVSMVALSGCIWLQAFVVTIETN 944
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143322|emb|CBI21883.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1755 bits (4545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 855/974 (87%), Positives = 904/974 (92%), Gaps = 30/974 (3%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TG------------------------------NETKLGMTRGIPEPKLTAVDAMIDKLTG 270
TG NETKLGM+RGIPEPKLTAVDAMIDKLTG
Sbjct: 241 TGKDTRALLNNGRVLFGGSFQVFLLKAFDCLRNETKLGMSRGIPEPKLTAVDAMIDKLTG 300
Query: 271 AIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPIS 330
AIFVFQIVVVIVLG AGNVWKDTEA KQWYVLYP++ PWYELLVIPLRFELLCSIMIPIS
Sbjct: 301 AIFVFQIVVVIVLGIAGNVWKDTEAVKQWYVLYPKKGPWYELLVIPLRFELLCSIMIPIS 360
Query: 331 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 390
IKVSLDLVKSLYAKFIDWD +MID ET TPSHATNTAISEDL QVEYILTDKTGTLTEN
Sbjct: 361 IKVSLDLVKSLYAKFIDWDNQMIDQETSTPSHATNTAISEDLGQVEYILTDKTGTLTENI 420
Query: 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 450
MIFRRCCIGGIFYGNE+GDALKDV LLNA++SGSPDVI+FLTVMA+CNTVIP KSK GAI
Sbjct: 421 MIFRRCCIGGIFYGNESGDALKDVELLNAVSSGSPDVIQFLTVMALCNTVIPVKSKTGAI 480
Query: 451 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 510
YKAQSQDE+ALV AAA+LHMV VNKNA+ LEI FN S++QYE+L+TLEFTSDRKRMSVV
Sbjct: 481 SYKAQSQDEDALVQAAARLHMVFVNKNANTLEINFNASIIQYEVLDTLEFTSDRKRMSVV 540
Query: 511 VKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEY 570
VKDC +G I LLSKGADEAI+PYA AGQQTRTF EAVEQYSQLGLRTLCLAWRE++EDEY
Sbjct: 541 VKDCQNGKIFLLSKGADEAIIPYACAGQQTRTFTEAVEQYSQLGLRTLCLAWRELKEDEY 600
Query: 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 630
++WSLMFKEA+STL+DREWR+AEVCQRLEHDL++LGVTAIEDRLQDGVPETIETLRKAGI
Sbjct: 601 RDWSLMFKEANSTLVDREWRLAEVCQRLEHDLEILGVTAIEDRLQDGVPETIETLRKAGI 660
Query: 631 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690
NFWMLTGDKQNTAIQIALSCNFISPEPKGQLL I+GKTEDEV RSL+RVLLTMRITTSEP
Sbjct: 661 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLLINGKTEDEVGRSLDRVLLTMRITTSEP 720
Query: 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI 750
KDVAFV+DGWALEIALKHYRKAFT+LAILSRTA+CCRVTPSQKAQLVE+LKSCDYRTLAI
Sbjct: 721 KDVAFVIDGWALEIALKHYRKAFTDLAILSRTALCCRVTPSQKAQLVEILKSCDYRTLAI 780
Query: 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 810
GDGGNDVRMIQ+ADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS
Sbjct: 781 GDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 840
Query: 811 QYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTV 870
QYSFYKSLLICFIQIFFSFISG+SGTSLFNSVSLMAYNVFYTSIPVLVS +DKDLSE TV
Sbjct: 841 QYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEKTV 900
Query: 871 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSG 930
MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIV FVISIH YAYEKSEMEEVSMVALSG
Sbjct: 901 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYEKSEMEEVSMVALSG 960
Query: 931 CIWLQAFVVALETK 944
CIWLQAFVV +ET
Sbjct: 961 CIWLQAFVVTIETN 974
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132912|ref|XP_002327910.1| aminophospholipid ATPase [Populus trichocarpa] gi|222837319|gb|EEE75698.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 840/946 (88%), Positives = 891/946 (94%), Gaps = 2/946 (0%)
Query: 1 MKRYIYINDDETS--QDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLW 58
MKR++YINDDE+S DLYC NR+SNRKYTL+NFLPKNL EQFSRFMNQYFLLIACLQLW
Sbjct: 1 MKRFVYINDDESSPTHDLYCDNRISNRKYTLLNFLPKNLMEQFSRFMNQYFLLIACLQLW 60
Query: 59 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQD 118
SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEK+VW+V++GIKK IQ+QD
Sbjct: 61 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKQVWIVRKGIKKHIQAQD 120
Query: 119 IRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFEL 178
I VGN+VWLRENDEVPCDLVLIGTSDPQG+CY+ETAALDGE DLKTR+ P+ACMG+DFEL
Sbjct: 121 ICVGNLVWLRENDEVPCDLVLIGTSDPQGLCYIETAALDGEIDLKTRVTPSACMGIDFEL 180
Query: 179 LHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238
LHKIKGVIECP PDKDIRR D NLRL PPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA
Sbjct: 181 LHKIKGVIECPNPDKDIRRLDANLRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 240
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQ 298
VYTGNETKLGM+RGIPEPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 241 VYTGNETKLGMSRGIPEPKLTALDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEARKL 300
Query: 299 WYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD 358
WYVLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD EMID ET+
Sbjct: 301 WYVLYPDEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDREMIDLETE 360
Query: 359 TPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLN 418
TPSHATNTAISEDL QVEYILTDKTGTLTEN+M+FR CCI G FYGNE GDA KD LLN
Sbjct: 361 TPSHATNTAISEDLGQVEYILTDKTGTLTENKMVFRICCISGNFYGNEAGDASKDKQLLN 420
Query: 419 AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478
AI+SGSPDV+RFLTVMA+CNTVIP +SK GAILYKAQSQDE+ALVHAAA+L+MVLV KN
Sbjct: 421 AISSGSPDVVRFLTVMAICNTVIPVQSKTGAILYKAQSQDEDALVHAAAKLNMVLVCKNG 480
Query: 479 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ 538
+ILE++FN S +QYE+LETLEFTSDRKRMSVVV+DC +G I LLSKGADEAILPYA GQ
Sbjct: 481 NILELRFNTSAIQYEVLETLEFTSDRKRMSVVVRDCQNGKILLLSKGADEAILPYASPGQ 540
Query: 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
QTR F EAVEQYSQLGLRTLCLAWRE++EDEY+EWS MF+EASSTL+DREWRIAEVCQRL
Sbjct: 541 QTRIFNEAVEQYSQLGLRTLCLAWRELKEDEYEEWSFMFREASSTLVDREWRIAEVCQRL 600
Query: 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658
E DL+VLGVTAIEDRLQDGVPETI TLRKAGI+FWMLTGDKQNTAIQIALSCNFISPEPK
Sbjct: 601 ERDLEVLGVTAIEDRLQDGVPETIYTLRKAGIHFWMLTGDKQNTAIQIALSCNFISPEPK 660
Query: 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
GQLL IDGKTE+EV RSLERVLLTMR T SEPKDVAFVVDGWALEIALKHY KAFTELAI
Sbjct: 661 GQLLLIDGKTEEEVGRSLERVLLTMRTTASEPKDVAFVVDGWALEIALKHYWKAFTELAI 720
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
LSRTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAA
Sbjct: 721 LSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAA 780
Query: 779 RAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL 838
RAADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSL
Sbjct: 781 RAADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSL 840
Query: 839 FNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRS 898
FNSVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRS
Sbjct: 841 FNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRS 900
Query: 899 LFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
LFHAIV FVISIH YA+EKSEMEEV MVALSGCIWLQAFVV LET
Sbjct: 901 LFHAIVVFVISIHAYAFEKSEMEEVGMVALSGCIWLQAFVVTLETN 946
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188194|ref|NP_001190471.1| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229647|sp|P98205.1|ALA2_ARATH RecName: Full=Phospholipid-transporting ATPase 2; Short=AtALA2; AltName: Full=Aminophospholipid ATPase 2; AltName: Full=Aminophospholipid flippase 2 gi|332007696|gb|AED95079.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1743 bits (4514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/944 (87%), Positives = 890/944 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ET
Sbjct: 901 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETN 944
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188192|ref|NP_568633.2| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|332007695|gb|AED95078.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1738 bits (4500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/944 (87%), Positives = 889/944 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+ R++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 33 LDRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 92
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 93 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 152
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 153 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 212
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 213 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 272
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 273 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 332
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 333 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 392
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 393 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 452
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 453 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 512
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 513 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 572
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 573 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 632
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 633 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 692
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 693 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 752
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 753 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 812
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 813 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 872
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 873 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 932
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ET
Sbjct: 933 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETN 976
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449478968|ref|XP_004155467.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1726 bits (4471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/944 (87%), Positives = 894/944 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYF LIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFXLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK WY
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V +P+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AGQQT
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+AEVCQRLE
Sbjct: 541 RTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLER 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
+ +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CNFISPEPKGQ
Sbjct: 601 NFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+AFTELAILS
Sbjct: 661 LLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGR+LNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HA+V FVISIH YA EKSEM EVSMVALSGCIWLQAFVV LET
Sbjct: 901 HAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETN 944
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438125|ref|XP_004136840.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1721 bits (4456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 826/953 (86%), Positives = 895/953 (93%), Gaps = 9/953 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK WY
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V +P+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--- 537
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AG
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGNRK 540
Query: 538 ------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRI 591
QQTRTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+
Sbjct: 541 IXILYFQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRL 600
Query: 592 AEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
AEVCQRLE + +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CN
Sbjct: 601 AEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCN 660
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 711
FISPEPKGQLL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+
Sbjct: 661 FISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRR 720
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISG
Sbjct: 721 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISG 780
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFIS
Sbjct: 781 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFIS 840
Query: 832 GLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTF 891
G+SGTSLFNSVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGR+LNPSTF
Sbjct: 841 GVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTF 900
Query: 892 AGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
AGWFGRSLFHA+V FVISIH YA EKSEM EVSMVALSGCIWLQAFVV LET
Sbjct: 901 AGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETN 953
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297794981|ref|XP_002865375.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] gi|297311210|gb|EFH41634.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1711 bits (4432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/944 (86%), Positives = 878/944 (93%), Gaps = 11/944 (1%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGVAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTVIP +SKAG I+YKAQSQDE+ALV AAA+LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVIPVQSKAGDIVYKAQSQDEDALVIAAAKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGS+++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSIIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYACAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKT+++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+ K F ELAILS
Sbjct: 661 LLMIDGKTKEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHHKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF LFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF-----------LFN 829
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTSIPVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 830 SVSLMAYNVFYTSIPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 889
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETK 944
HAIV FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ET
Sbjct: 890 HAIVVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETN 933
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 944 | ||||||
| DICTYBASE|DDB_G0282959 | 1536 | DDB_G0282959 "transmembrane pr | 0.426 | 0.262 | 0.468 | 1.5e-191 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.518 | 0.372 | 0.370 | 2.1e-158 | |
| MGI|MGI:1330848 | 1149 | Atp8a1 "ATPase, aminophospholi | 0.952 | 0.782 | 0.371 | 5.8e-153 | |
| UNIPROTKB|Q9Y2Q0 | 1164 | ATP8A1 "Probable phospholipid- | 0.534 | 0.433 | 0.377 | 2.5e-151 | |
| UNIPROTKB|F1NX55 | 1150 | ATP8A1 "Uncharacterized protei | 0.940 | 0.772 | 0.374 | 4.7e-151 | |
| UNIPROTKB|Q29449 | 1149 | ATP8A1 "Probable phospholipid- | 0.952 | 0.782 | 0.368 | 9.8e-151 | |
| FB|FBgn0259221 | 1350 | CG42321 [Drosophila melanogast | 0.952 | 0.665 | 0.377 | 2e-150 | |
| UNIPROTKB|F1PHG9 | 1164 | ATP8A1 "Uncharacterized protei | 0.534 | 0.433 | 0.377 | 4.6e-150 | |
| UNIPROTKB|E1BN98 | 1145 | ATP8A1 "Probable phospholipid- | 0.849 | 0.700 | 0.394 | 2.7e-148 | |
| ZFIN|ZDB-GENE-100209-2 | 1135 | atp8a2 "ATPase, aminophospholi | 0.507 | 0.422 | 0.390 | 9.6e-148 |
| DICTYBASE|DDB_G0282959 DDB_G0282959 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 936 (334.5 bits), Expect = 1.5e-191, Sum P(4) = 1.5e-191
Identities = 192/410 (46%), Positives = 264/410 (64%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY ND E ++ Y +NR+SN KYT++ F+PKNL EQF R MN YFL+I LQL+ IT
Sbjct: 22 RTIYANDIERNKK-YPSNRISNTKYTIITFIPKNLMEQFGRAMNIYFLMIGILQLFPSIT 80
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PV+P STWG L FIFA+SA KEA+DDYNR DKKANE+ +++ K+ IQSQ+I VG
Sbjct: 81 PVDPVSTWGALFFIFAISAVKEAFDDYNRSRRDKKANERIYNILRNNEKQQIQSQNILVG 140
Query: 123 NIVWLRENDEVPCDLVLIGTSDP-QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHK 181
+IV+L EN+E+PCDL+++ TSD YV+T+ LDGETDLK + G++ L
Sbjct: 141 DIVYLTENEEIPCDLLVLSTSDKITNSLYVQTSNLDGETDLKIKYSIKETSGLELSQLKS 200
Query: 182 IKGVIECPGPDKDIRRFDGNL-----RLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236
+GV+ECP P+ +I +FD L R + F +D P+ N +LQ+ +L+NT + G
Sbjct: 201 FQGVLECPVPNAEINKFDSRLSMRANRKVNTFSHSDWLPVDSSNLVLQATHLKNTNYIYG 260
Query: 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEAR 296
+ VYTGNETKLG + K T +D I++ T G G+ + +
Sbjct: 261 LVVYTGNETKLGKNKMDVPTKWTKLDKQINRTTIVIFCIQLTLVLIFGFIGDYIRIIQGH 320
Query: 297 KQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPE 356
QWY+ Y + ++IPLRF LL S+MIPIS+KV++D++K YA FI+WD +M + +
Sbjct: 321 TQWYLDYDDTSLSSKTIIIPLRFLLLNSMMIPISLKVTIDVIKYAYALFINWDLKMYNSD 380
Query: 357 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 406
D P+ A +TA+SEDL Q+EYI TDKTGTLTEN M+F +C I GI Y +
Sbjct: 381 IDCPATANSTALSEDLGQIEYIFTDKTGTLTENVMLFSKCSINGIVYNKD 430
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 861 (308.1 bits), Expect = 2.1e-158, Sum P(2) = 2.1e-158
Identities = 186/502 (37%), Positives = 293/502 (58%)
Query: 430 FLTVMAVCNTVIPAKSKA--GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG 487
FLT++AVC++V+P + I+Y+A S DE ALV AA L N++ + + G
Sbjct: 617 FLTLLAVCHSVVPDRPNKDDSEIIYEASSPDEAALVSAAKNLGYAFYNRDPTGCLVNIRG 676
Query: 488 SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV--E 545
+ ++E+L LEF SDRKRMSV+ ++ G I L KGAD +LP Q+ + E
Sbjct: 677 KIERFEVLNVLEFNSDRKRMSVICRN-PQGRIILYCKGADTTVLPLLRKDQEELYSITLE 735
Query: 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVL 605
++ ++ GLRTLCLA+ +EE++YQ+W+ ++KEA+ ++ DR+ ++ +V + +E +L ++
Sbjct: 736 FLQDFAADGLRTLCLAYTYLEEEDYQQWNELYKEAAISIQDRDMKVDKVSELIERNLSLI 795
Query: 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID 665
G TAIED+LQ+GVP+ I L KA I W+LTGDKQ TAI I SC+ ++ + + ++ ++
Sbjct: 796 GSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMR--IIILN 853
Query: 666 GKTEDEVCRSLERVL---LTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 721
G +++V ++ + + + A VV+G L AL+ + F ELA +
Sbjct: 854 GSNQEDVHNQIQGAIDAYFSDDAENHQNSGFALVVEGSCLNFALEGELKSVFLELAANCK 913
Query: 722 TAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
+ ICCR TP QKAQ+V++++ + TLAIGDG NDV MIQ A IG+GISG EG+QA A
Sbjct: 914 SVICCRTTPLQKAQVVKMVRDTLRAVTLAIGDGANDVSMIQAAHIGIGISGHEGMQAVMA 973
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXXXN 840
+DYSI +F FL RL++VHGR+ Y R + L Y FYK +
Sbjct: 974 SDYSIAQFSFLYRLLVVHGRWDYKRNSKLMLYCFYKNMVFAMTQFWFGIYNSFSAQTMFD 1033
Query: 841 SVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSL 899
S S+ +NV +T +P++V I D+D+S + ++PQ+ Q N W +
Sbjct: 1034 SWSISIFNVVFTGLPIIVCAIFDQDVSAESSQKYPQLYASGQKDSEFNLRVLWVWIVEAW 1093
Query: 900 FHAIVAFVISIHVYAYEKSEME 921
H++V F +Y++ + +E
Sbjct: 1094 IHSVVIFFGVYGLYSHGSTLLE 1115
|
|
| MGI|MGI:1330848 Atp8a1 "ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
Identities = 345/928 (37%), Positives = 522/928 (56%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + K WY+
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWYL 330
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L+ + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 331 HLHYGGASNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSSQFGDEKTFNDPSL 448
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L+ + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LDNLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSVVV+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVRT-PSGKLRLYCKGADTVIYER 566
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E +++EW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRASTSVQNRLLKLE 626
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCRL 686
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 LKRN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXX 830
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFV 864
Query: 831 XXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPS 889
+ YNV +T++P L I ++ + ++++P++ Y + L+ +
Sbjct: 865 NGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPEL--YKTSQNALDFN 922
Query: 890 TFAGWFG--RSLFHAIVAFVISIHVYAY 915
T W LFH+++ F + Y
Sbjct: 923 TKVFWVHCLNGLFHSVILFWFPLKALQY 950
|
|
| UNIPROTKB|Q9Y2Q0 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 849 (303.9 bits), Expect = 2.5e-151, Sum P(2) = 2.5e-151
Identities = 197/522 (37%), Positives = 294/522 (56%)
Query: 403 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + G ++ +G D +L R T+ + D A ++D
Sbjct: 688 KQETAINIGHSCKLLKKN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYK 865
Query: 817 XXXXXXXXXXXXXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 875
+ YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 876 ILFYCQAGRLLNPSTFAGWFG--RSLFHAIVAFVISIHVYAY 915
+ Y + L+ +T W LFH+++ F + Y
Sbjct: 926 L--YKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQY 965
|
|
| UNIPROTKB|F1NX55 ATP8A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
Identities = 345/922 (37%), Positives = 522/922 (56%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANAFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAVKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVDVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL--IPAACMGMDFELLH 180
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +P D E L
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQQGLPLTSDIKDIESLM 214
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
++ G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VY
Sbjct: 215 RLSGRIECESPNRHLYDFVGNIRL----DGHGTVPLGSDQILLRGAQLRNTQWVHGIVVY 270
Query: 241 TGNETKLGMTRGIPEPKLTAVDAM--IDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQ 298
TG++TKL P K++ V+ + I L +G+A VW + +
Sbjct: 271 TGHDTKLMQNSTSPPLKMSNVERITNIQILILFCILIAMSLICSIGSA--VWNRRHSERD 328
Query: 299 WYV-LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
WY+ L + L L F +L + +IPIS+ V+L++VK + A FI+WD +M T
Sbjct: 329 WYLDLNYGGASNFGLNF--LTFIILFNNLIPISLLVTLEVVKFIQAYFINWDIDMHYEPT 386
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG--NETGDA--LKD 413
DT + A + ++E+L QV+YI +DKTGTLT N M F++C + G+ YG ++ GD D
Sbjct: 387 DTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTVAGVAYGQGSQNGDEKMFSD 446
Query: 414 VGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470
LL + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA L
Sbjct: 447 SSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAARHLR 505
Query: 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAI 530
V + + I+ G +YE+L LEFTS RKRMSV+V+ +G + L KGAD I
Sbjct: 506 FVFTGRTPDSVIIESLGHEERYELLNVLEFTSSRKRMSVIVRT-PTGKLRLYCKGADTVI 564
Query: 531 LP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589
A + + ++ +EQ++ GLRTLC A E+ E +YQEW ++ AS+ + +R
Sbjct: 565 YDRLAESSKYKEITLKHLEQFATEGLRTLCFAVAEISESDYQEWLDVYHRASTAIQNRAL 624
Query: 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649
++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I S
Sbjct: 625 KLEESYELIEKNLQLLGATAIEDKLQDKVPETIETLMKADIKIWILTGDKQETAINIGHS 684
Query: 650 CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH- 708
C + G ++ +G D +L T+ + D A ++DG +L+ AL
Sbjct: 685 CKLLRKN-MGLIVINEGSL-DGTRETLSHHCSTLGDALRKENDFALIIDGKSLKYALTFG 742
Query: 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV 767
R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GV
Sbjct: 743 VRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGANDVSMIQTAHVGV 802
Query: 768 GISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXX 827
GISG EGLQAA ++DYSI +F++LK L+LVHG ++YNR A Y FYK
Sbjct: 803 GISGNEGLQAANSSDYSIAQFKYLKNLLLVHGAWNYNRVAKCILYCFYKNIVLYIIEIWF 862
Query: 828 XXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLL 886
+ YNV +T++P L I ++ + ++++P++ Y + L
Sbjct: 863 AFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPEL--YKTSQNAL 920
Query: 887 NPSTFAGWFG--RSLFHAIVAF 906
+ +T W LFH+ + F
Sbjct: 921 DFNTKVFWVHCLNGLFHSFILF 942
|
|
| UNIPROTKB|Q29449 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 342/928 (36%), Positives = 519/928 (55%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 215 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + + WY+
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWYL 330
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 331 NLNYGGANNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++ +L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSL 448
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKLRLYCKGADTVIYDR 566
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLE 626
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCK- 685
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ + G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 686 LRRKNMGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXX 830
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRGSKCILYCFYKNIVLYIIEIWFAFV 864
Query: 831 XXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPS 889
+ YNV +T++P L I ++ + ++++P++ Y + L+ +
Sbjct: 865 NGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKEYMLKYPEL--YKTSQNALDFN 922
Query: 890 TFAGWFG--RSLFHAIVAFVISIHVYAY 915
T W LFH+++ F + Y
Sbjct: 923 TKVFWVHCLNGLFHSVILFWFPLKALQY 950
|
|
| FB|FBgn0259221 CG42321 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1468 (521.8 bits), Expect = 2.0e-150, P = 2.0e-150
Identities = 350/928 (37%), Positives = 526/928 (56%)
Query: 2 KRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
+R I +N + ++ Y NR++ KY+ ++FLP L+EQF R+ N +FLLIA LQ +
Sbjct: 216 RRIINLNGPQPTK--YGNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEV 273
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV 121
+P +T PL+FI +VSA KE +D R+ +D + N + + + G ++ ++ V
Sbjct: 274 SPTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWCTVRWSELTV 333
Query: 122 GNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLH 180
G+I+ + N P DL+L+ +S+PQ +C++ETA LDGET+LK R +PA ++ + L
Sbjct: 334 GDIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQ 393
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNT-ILQ-SCYLRNTEWACGVA 238
+++G IEC P++ + F+G LR + P + N +LQ LRNT W G+
Sbjct: 394 RLEGRIECELPNRHLYEFNGVLR------ETGKPPAALGNDQVLQRGAILRNTAWVFGIV 447
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXL----GTAGNVWKDTE 294
VY+G ETKL M P + +DKLT L G W
Sbjct: 448 VYSGQETKL-MKNSTSAPLKRST---VDKLTNTQILMLFMILISLCIISGLCNLFWTREH 503
Query: 295 ARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID 354
+ WY L +F L L F +L + +IPIS++V+L+LV+ L A FI++D EM
Sbjct: 504 SETDWY-LGLTDFKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYH 562
Query: 355 PETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE-TGDALKD 413
E++TP+ A + ++E+L V+YI +DKTGTLT+N M F++C I G Y E T + +
Sbjct: 563 EESNTPAMARTSNLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYTAERTPEESQL 622
Query: 414 VGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
V + S + FL +++VC+TVIP + + G ++Y A S DE ALV A + +
Sbjct: 623 VQNILGRHETSAVIEEFLELLSVCHTVIPERKENGNMIYHAASPDERALVEGAQKFGYIF 682
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ +EI G +YE+L LEFTS RKRMS++V+ + I L KGAD I
Sbjct: 683 DTRTPKYVEINALGVRKRYEVLNVLEFTSSRKRMSLIVRTPEN-KIKLFCKGADTVIYER 741
Query: 533 YAHAGQQTRT-FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRI 591
A GQ R + +E+++ GLRTLCLA ++ D YQEWS F +AS L +RE ++
Sbjct: 742 LAPQGQAFREQTLRHLEEFASDGLRTLCLAVADIRPDVYQEWSQTFDKASVALQNRESKL 801
Query: 592 AEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
+ +E++L++LG TAIEDRLQDGVPETI +L AGI W+LTGDKQ TAI I SC
Sbjct: 802 EDAANLIENNLRLLGATAIEDRLQDGVPETIASLLDAGIYIWVLTGDKQETAINIGYSCR 861
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYR 710
IS ++ ++ ++ D + R + ++++ +VA V+DG L+ AL R
Sbjct: 862 LISHSM--DIIILNEESLDATREVIHRHYGEFKSSSAKDANVALVIDGTTLKYALSCDLR 919
Query: 711 KAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGI 769
F +L IL R ICCRV+P QKA++VE++ +S + TLAIGDG NDV MIQKA++G+GI
Sbjct: 920 NDFQDLCILCRVVICCRVSPMQKAEVVEMVTQSTNAVTLAIGDGANDVAMIQKANVGIGI 979
Query: 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXX 829
SG EGLQAA A+DYSI +FR+L+RL+LVHG ++Y R + L YSFYK
Sbjct: 980 SGVEGLQAACASDYSIAQFRYLQRLLLVHGAWNYARISKLILYSFYKNVCLYVIELWFAV 1039
Query: 830 XXXXXXXXXXNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNP 888
++ YNV +T++P + +K + T++++P + Q +L N
Sbjct: 1040 YSGWSGQILFERWTIGLYNVLFTAMPPFAMGLFEKFCTAETMIRYPMLYKTSQNAKLFNV 1099
Query: 889 STFAGWFGRSLFHAIVAFVISIHVYAYE 916
F W +L H++ F + + Y E
Sbjct: 1100 KVFWIWIFNALLHSVFLFWLPLAAYTKE 1127
|
|
| UNIPROTKB|F1PHG9 ATP8A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 842 (301.5 bits), Expect = 4.6e-150, Sum P(2) = 4.6e-150
Identities = 197/522 (37%), Positives = 293/522 (56%)
Query: 403 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + G ++ +G D +L R + + D A ++D
Sbjct: 688 KQETAINIGHSCKLLRKN-MGMIVINEGSL-DATRETLGRHCTILGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYK 865
Query: 817 XXXXXXXXXXXXXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 875
+ YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 876 ILFYCQAGRLLNPSTFAGWFG--RSLFHAIVAFVISIHVYAY 915
+ Y + L+ +T W LFH+++ F + Y
Sbjct: 926 L--YKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQY 965
|
|
| UNIPROTKB|E1BN98 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 326/826 (39%), Positives = 482/826 (58%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 34 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 91
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 92 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 151
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 152 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 211
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 212 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 267
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + + WY+
Sbjct: 268 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWYL 327
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 328 NLNYGGANNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 385
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 386 AMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSL 445
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 446 LENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 504
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 505 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKLRLYCKGADTVIYDR 563
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++
Sbjct: 564 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLE 623
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 624 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKL 683
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 684 LRKN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 741
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 742 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 801
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 802 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYK 847
|
|
| ZFIN|ZDB-GENE-100209-2 atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 836 (299.3 bits), Expect = 9.6e-148, Sum P(2) = 9.6e-148
Identities = 190/487 (39%), Positives = 274/487 (56%)
Query: 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483
SP + FLT+MAVC+TV+P + I+Y+A S DE ALV A L V + + I
Sbjct: 474 SPQICEFLTMMAVCHTVVPERED-NQIIYQASSPDEGALVKGAKSLGFVFTARTPHSVII 532
Query: 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543
+ G YE+L LEF+S+RKRMSV+V+ +GN+ L KGAD I + Q +
Sbjct: 533 EARGKEQTYELLNVLEFSSNRKRMSVIVRT-PTGNLRLYCKGADNVIFERLNVTSQYKEL 591
Query: 544 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602
A +EQ++ GLRTLC A+ ++EE Y EW + S+ L DR ++ E + +E +L
Sbjct: 592 TVAHLEQFATEGLRTLCFAYVDLEEGAYLEWLKEYNRISTVLKDRAQKLEECYELIEKNL 651
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL 662
+LG TAIEDRLQ GVPETI TL +A I W+LTGDKQ TAI I SC +S L+
Sbjct: 652 LLLGATAIEDRLQAGVPETIATLMRADIKIWVLTGDKQETAINIGYSCRLVSHGMS--LI 709
Query: 663 SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 721
++ + D +L ++ + + ++A ++DG L+ AL R+AF +LA+ +
Sbjct: 710 IVNEDSLDATRATLTAHCSSLGDSLRKENELALIIDGQTLKYALSFEVRQAFLDLALSCK 769
Query: 722 TAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
ICCRV+P QK+++V+++K TLAIGDG NDV MIQ A +GVGISG EG+QA +
Sbjct: 770 AVICCRVSPLQKSEIVDMVKKHVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNS 829
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXXXN 840
+DYSI +F +L++L+LVHG +SYNR Y FYK
Sbjct: 830 SDYSIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFE 889
Query: 841 SVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSL 899
+ YNV +T++P I D+ S+ +++ PQ+ Q N F G +L
Sbjct: 890 RWCIGLYNVIFTALPPFTLGIFDRPCSQQNMIRFPQLYRITQNAEGFNTKVFWGHCINAL 949
Query: 900 FHAIVAF 906
H+I+ F
Sbjct: 950 IHSIILF 956
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P98205 | ALA2_ARATH | 3, ., 6, ., 3, ., 1 | 0.8781 | 1.0 | 0.8527 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 944 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-132 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-73 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-33 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-24 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-23 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-18 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-13 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 7e-12 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 8e-12 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-10 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-10 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 9e-10 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 6e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-07 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 4e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-06 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-05 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 9e-05 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-04 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-04 | |
| PRK13582 | 205 | PRK13582, thrH, phosphoserine phosphatase; Provisi | 2e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 2e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 0.001 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 0.001 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 0.001 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.002 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 0.002 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 0.004 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 845 bits (2185), Expect = 0.0
Identities = 372/949 (39%), Positives = 545/949 (57%), Gaps = 59/949 (6%)
Query: 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFI 76
+C+N++S KYT++ FLPKNL+EQF RF N YFL++A LQ +++P ++ PL F+
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 77 FAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIK-KLIQSQDIRVGNIVWLRENDEVPC 135
V+A KEA +D R DK+ N + V++ + I +D+RVG+IV +++++ +P
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 136 DLVLIGTSDPQGVCYVETAALDGETDLKTR--LIPAACMGMDFELLHKIKGVIECPGPDK 193
DL+L+ +S+P GVCYVETA LDGET+LK R L M +D + + G IEC P+
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM-LDEDDIKNFSGEIECEQPNA 179
Query: 194 DIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGI 253
+ F GN+ + PL+ N +L+ C LRNT+W GV VYTG++TKL
Sbjct: 180 SLYSFQGNMT----INGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235
Query: 254 PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY---PQEFPWY 310
K + ++ ++ L +F V+ ++ +W D + WY+ +
Sbjct: 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAAN 295
Query: 311 ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISE 370
L F +L S +IPIS+ VSL+LVKS+ A FI+ D +M +TDTP+ + ++E
Sbjct: 296 GFFSF-LTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNE 354
Query: 371 DLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG---NETGDAL-KDVGLLN-------- 418
+L QVEYI +DKTGTLT+N M F++C I G+ YG E D + + +G
Sbjct: 355 ELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLV 414
Query: 419 ---AITSGSPDVIR--------------FLTVMAVCNTVIP--AKSKAGAILYKAQSQDE 459
T P ++ F +A+C+TV+P I Y+A S DE
Sbjct: 415 ESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDE 474
Query: 460 EALVHAAAQLHMVLVNK--NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 517
ALV AA + V + + L I+ +G +YEIL LEF SDRKRMSV+V+ G
Sbjct: 475 AALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVR-NPDG 533
Query: 518 NISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575
I LL KGAD I + Q E +E Y+ GLRTLC+A+RE+ E+EY+EW+
Sbjct: 534 RIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNE 593
Query: 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635
+ EAS+ L DRE ++ V + +E DL +LG TAIED+LQ+GVPETIE LR+AGI W+L
Sbjct: 594 EYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVL 653
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE------ 689
TGDK TAI I SC +S + + I + D + + T+ E
Sbjct: 654 TGDKVETAINIGYSCRLLSRNME--QIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGD 711
Query: 690 PKDVAFVVDGWALEIALKHY-RKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRT 747
+VA V+DG +L AL K F +LA+ + ICCRV+PSQKA +V L+K S T
Sbjct: 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771
Query: 748 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTA 807
LAIGDG NDV MIQ+AD+GVGISG+EG+QA A+D++IG+FRFL +L+LVHGR+SY R +
Sbjct: 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRIS 831
Query: 808 FLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLV-STIDKDLS 866
+ Y FYK+L+ IQ ++SF +G SG +L+ ++ YNVF+T++PV+ D+D+S
Sbjct: 832 KMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVS 891
Query: 867 EGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY 915
+++PQ+ Q G+ + TF GW ++ ++V F + Y
Sbjct: 892 ASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYIL 940
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 567 bits (1463), Expect = 0.0
Identities = 344/1007 (34%), Positives = 532/1007 (52%), Gaps = 86/1007 (8%)
Query: 3 RYIYINDDETSQDLY--CANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACL-QLWS 59
R +Y+ND E S + + N + KY++ +FLP+NL+EQF R YFL+IA L QL
Sbjct: 71 RLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ 130
Query: 60 LITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDI 119
L AS PL F+ V+A K+A++D+ R+ SD+ N + WV+ + + +DI
Sbjct: 131 LAVFGRGASIL-PLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDI 189
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179
RVG I+ ++ ND +PCD+VL+ TSDP GV YV+T LDGE++LKTR + E
Sbjct: 190 RVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEK- 248
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
KI G+I+C P+++I F N+ +D L N IL+ C L+NT WA GVAV
Sbjct: 249 EKINGLIKCEKPNRNIYGFQANME-----VDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEA---- 295
Y G ETK + K + ++ ++ + +F I + ++ VW
Sbjct: 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELD 363
Query: 296 ------RKQWYVLYPQEFPWY----ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKF 345
RK + P+ + +Y E+ L ++ IMIPIS+ +S++LV+ A F
Sbjct: 364 TIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYF 423
Query: 346 IDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405
+ D +M D +++ I+EDL Q++Y+ +DKTGTLTEN+M F+ I G+ Y +
Sbjct: 424 MIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSD 483
Query: 406 ET---------------GDALK-------DVGLLNAITSGS-----PDVIRFLTVMAVCN 438
G L+ D LL SG V F +A CN
Sbjct: 484 GRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543
Query: 439 TVIP------AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQY 492
T++P + + Y+ +S DE+ALV+AAA +L+ + + + I +G ++
Sbjct: 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRF 603
Query: 493 EILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT---RTFVEAVEQ 549
+L EF SDRKRMSV++ C + + KGAD ++ R +
Sbjct: 604 NVLGLHEFDSDRKRMSVIL-GCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHT 662
Query: 550 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTA 609
YS LGLRTL + RE+ + E+++W F+ AS+ LI R + +V +E++L +LG +A
Sbjct: 663 YSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASA 722
Query: 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669
IED+LQ GVPE IE+LR AGI W+LTGDKQ TAI I S ++ K + I+ ++
Sbjct: 723 IEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTN--KMTQIIINSNSK 780
Query: 670 DEVCRSLERVLLTMR--ITTSEPKD------------VAFVVDGWALEIAL-KHYRKAFT 714
+ +SLE L+ + T S VA ++DG +L L +
Sbjct: 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLF 840
Query: 715 ELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGRE 773
+LA +CCRV P QKA +V L+K+ TLAIGDG NDV MIQ AD+GVGISG+E
Sbjct: 841 QLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQE 900
Query: 774 GLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGL 833
G QA A+D+++G+FRFL L+LVHG ++Y R ++ Y+FY++ + + ++ +
Sbjct: 901 GRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCF 960
Query: 834 SGTSLFNSVSLMAYNVFYTSIP-VLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFA 892
+ T+ N S + Y+V YT++P ++V +DKDLS T++++PQ+ Q N F
Sbjct: 961 TLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020
Query: 893 GWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVV 939
+L+ + V F + + +AY S ++ S+ G +W A V+
Sbjct: 1021 LTMIDTLWQSAVVFFVPL--FAYWASTIDGSSI----GDLWTLAVVI 1061
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 419 bits (1080), Expect = e-132
Identities = 222/954 (23%), Positives = 358/954 (37%), Gaps = 181/954 (18%)
Query: 7 INDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ--LWSLITPV 64
++++E + L + + L K L QF L+ A L + +
Sbjct: 45 LSEEEVKRRLKKYGPNELPEEKKRSLLKKFL-RQFKDPFIILLLVAALLSAFVGDWVDAG 103
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNI 124
A ++ I A+ + + + KK + + V++ G I + ++ G+I
Sbjct: 104 VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDI 163
Query: 125 VWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKG 184
V L D VP DL L+ +SD V+ +AL GE+ + D L
Sbjct: 164 VLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK-QALPLTKSDAPL------ 212
Query: 185 VIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244
G D+D N + + + A G+ V TG E
Sbjct: 213 -----GLDRD-------------------------NMLFSGTTVVSGR-AKGIVVATGFE 241
Query: 245 TKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
T+ G + T + ++KL + V +V+ ++ G
Sbjct: 242 TEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVG-------------- 287
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L+ E L L +P + + + +L A+ + D ++
Sbjct: 288 LFRGGNGLLESF---LTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV-------- 336
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT 421
+ E L V+ I +DKTGTLT+N+M ++ Y N G + D L
Sbjct: 337 --RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKI------YINGGGKDIDDKDLK---- 384
Query: 422 SGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 481
SP ++RFL A+CN+V P K+ Y+A E ALV A +L L + S L
Sbjct: 385 -DSPALLRFLLAAALCNSVTPEKNGW----YQAGDPTEGALVEFAEKLGFSL---DLSGL 436
Query: 482 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTR 541
E++ Y IL + F S+RKRMSV+VK G L KGA E IL
Sbjct: 437 EVE-------YPILAEIPFDSERKRMSVIVKT-DEGKYILFVKGAPEVILERC------- 481
Query: 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHD 601
+ +E ++ GLRTL A +E+ + + ++ +K+ D E +E D
Sbjct: 482 KSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDE------IESD 535
Query: 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQL 661
L LG+T IED ++ V E IE LR+AGI WM+TGD TAI IA C
Sbjct: 536 LVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECG---------- 585
Query: 662 LSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA-ILS 720
I + V+DG L+ ELA ++
Sbjct: 586 -----------------------IEAEAESAL--VIDGAELDALSDE------ELAELVE 614
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
++ RV+P QKA++VE L+ + GDG ND ++ AD+G+ + G EG AA+
Sbjct: 615 ELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKE 673
Query: 781 AD--YSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG--T 836
A + L +V GR Y Y K+ ++ I L
Sbjct: 674 AADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN----VGEVLTLLIYSLFNLFF 729
Query: 837 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG 896
+ L+ N+ S+P L ++ E VM+ P L N F +
Sbjct: 730 LPLTPLQLLWINLLTDSLPALALGVED--PESDVMKRPPRGP---EEGLFNRKIFWRFIL 784
Query: 897 RSLFHAIVAFVISIHVYAYE-----------KSEMEEVSMVALSGCIWLQAFVV 939
+ + F+++ +Y ++ ++ + L L V
Sbjct: 785 IIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAV 838
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 8e-73
Identities = 135/598 (22%), Positives = 215/598 (35%), Gaps = 163/598 (27%)
Query: 72 PLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLREND 131
L+F+ V K +D R LSD+ N + V++ G K+ I ++D+ G++V ++ +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE-IPAKDLVPGDVVLVKSGE 64
Query: 132 EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGP 191
VP D VL+ G C+V+ + L GE++ + L G I
Sbjct: 65 TVPADGVLL-----SGSCFVDESNLTGESNPVLK----------TALKETQSGTITGDLV 109
Query: 192 DKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251
F G L + +T + T V V TG ET R
Sbjct: 110 FAGTYVFGGTLIV----------VVTPTGIL-------TTVGRIAVVVKTGFET-----R 147
Query: 252 GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYE 311
+ K ++ I + + + V + W ++
Sbjct: 148 TPLQSKRDRLENFI--FILFLLLLALAVFLY--LFIRGWDPN--------------SIFK 189
Query: 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371
L LR ++ I++P ++ ++ + ++ + N E+
Sbjct: 190 AL---LRALIVLVIVVPPALPAAVTVALAVGDA------RLAK----KGILVRNLNALEE 236
Query: 372 LAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFL 431
L +V+Y+ +DKTGTLT+N+M + I G N V N SG P
Sbjct: 237 LGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNS----SSLVACDNNYLSGDP------ 286
Query: 432 TVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQ 491
E+AL+ +A + K + +
Sbjct: 287 --------------------------MEKALLKSAELV-------------GKADKGNKE 307
Query: 492 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551
Y+IL+ F+S KRMSV+V+ G+ L KGA E IL + + E + +
Sbjct: 308 YKILDVFPFSSVLKRMSVIVET-PDGSDLLFVKGAPEFILERCN------NYEEKYLELA 360
Query: 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIE 611
+ GLR L A +E LE DL+ LG+ E
Sbjct: 361 RQGLRVLAFASKE---------------------------------LEDDLEFLGLITFE 387
Query: 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-----SPEPKGQLLSI 664
D L+ ETIE L+ AGI M+TGD TA IA SPE K Q++
Sbjct: 388 DPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGIDVFARVSPEQKLQIVEA 445
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 3e-33
Identities = 164/777 (21%), Positives = 268/777 (34%), Gaps = 164/777 (21%)
Query: 48 YFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRY-----LSDKKANEKE 102
Y + + LW L + + I +S+T + Y L D +
Sbjct: 177 YVFQVFSVILWLL------DEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQS 230
Query: 103 VWVVKQGIKKLIQSQDIRVGNIVWLRENDE--VPCDLVLIGTSDPQGVCYVETAALDGET 160
V V++ G I S ++ G+IV + +E +PCD VL+ G C V + L GE+
Sbjct: 231 VIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGES 285
Query: 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKN 220
+P +K I G D + F+ +
Sbjct: 286 ------VPV------------LKFPIPDNGDDDED-----------LFLYETSKKHVLFG 316
Query: 221 --TILQSCYLRNTEWACGVAVYTGNET-KLGMTRGIPEPKLTAV----DAMIDKLTGAIF 273
ILQ + V TG T K + R I PK D+ L A+
Sbjct: 317 GTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVL 376
Query: 274 -VFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIP---- 328
+ + I+ L I LR + +I++P
Sbjct: 377 ALIGFIYTIIELIKDGR---------------------PLGKIILRSLDIITIVVPPALP 415
Query: 329 ----ISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384
I I SL +K P N A +++ DKTG
Sbjct: 416 AELSIGINNSLARLKKKGIF-------CTSPFR------INFA-----GKIDVCCFDKTG 457
Query: 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAK 444
TLTE+ + R + G+ E + + L +A C+++ +
Sbjct: 458 TLTEDGLDLR--GVQGLSGNQEFLKIVTEDSSLK--------PSITHKALATCHSLTKLE 507
Query: 445 SK-AGAILYKAQSQD-----EEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETL 498
K G L K + EE +A+ +L + + I+
Sbjct: 508 GKLVGDPLDKKMFEATGWTLEED--DESAEPTSILAVV------RTDDPPQ-ELSIIRRF 558
Query: 499 EFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTL 558
+F+S +RMSV+V + KGA E I + E ++ Y++ G R L
Sbjct: 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVL 618
Query: 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618
LA++E+ + Q+ + ++A +E +L LG E+ L+
Sbjct: 619 ALAYKELPKLTLQKAQDLSRDA-----------------VESNLTFLGFIVFENPLKPDT 661
Query: 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 678
E I+ L++A I M+TGD TA+ +A C ++P +L+ E ++
Sbjct: 662 KEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNT-LILAEAEPPESGKPNQIKF 720
Query: 679 V----LLTMRITTSEP-------------KDVAFVVDGWALEIALKHYRKAFTELAILSR 721
+ P + G A + H + L LS
Sbjct: 721 EVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRL--LSH 778
Query: 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
T + R+ P QK LVELL+ DY GDG ND +++AD+G+ +S E AA
Sbjct: 779 TTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-24
Identities = 124/490 (25%), Positives = 172/490 (35%), Gaps = 114/490 (23%)
Query: 363 ATNTAISEDLAQVE------YILTDKTGTLTENRMIFRRC-------------CIGGIFY 403
A AI L VE I +DKTGTLT N+M + C+ G Y
Sbjct: 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTY 330
Query: 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463
G +KD G + + T+ A+CN ++ + K E AL
Sbjct: 331 -APEGGVIKDDGPVAG--GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAAL- 386
Query: 464 HAAAQLHMVLVNK---NASILEIKFNG-------SVLQ--YEILETLEFTSDRKRMSVVV 511
VLV K A+ + SV ++ L TLEF+ DRK MSV+
Sbjct: 387 -------KVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLC 439
Query: 512 KDCHSGNISLLSKGADEAILPYAH------------AGQQTRTFVEAVEQYSQL-GLRTL 558
K S L KGA E +L + T + +++ LR L
Sbjct: 440 KP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCL 497
Query: 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618
LA++ D + +E DL +GV + D + V
Sbjct: 498 ALAFK----DIPDPREEDLLSDPANFE-----------AIESDLTFIGVVGMLDPPRPEV 542
Query: 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 678
+ IE R AGI M+TGD + TA I SP+ S G+ D
Sbjct: 543 ADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-------- 594
Query: 679 VLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE 738
E+ R A + SR PS K++LVE
Sbjct: 595 ------------------------EMGPAKQRAACRSAVLFSRV------EPSHKSELVE 624
Query: 739 LLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGKFRFLKRLILV 797
LL+ GDG ND ++KADIG+ + SG E A A+D + F + V
Sbjct: 625 LLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTE--VAKEASDMVLADDNFATIVAAV 682
Query: 798 H-GRYSYNRT 806
GR YN
Sbjct: 683 EEGRAIYNNM 692
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 8e-23
Identities = 113/495 (22%), Positives = 185/495 (37%), Gaps = 126/495 (25%)
Query: 378 ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVC 437
I +DKTGTLT+N M + IG + +L + +++ + +++
Sbjct: 381 ICSDKTGTLTQNVMSVVQGYIGEQRFNVR--------DVLRNVPKHVRNIL--VEGISLN 430
Query: 438 NTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILET 497
++ + G + S+ E AL L L+ + ++++
Sbjct: 431 SSSEEVVDRGGKRAFIG-SKTECAL------LDFGLLLLRD--YQEVRAEE----KVVKI 477
Query: 498 LEFTSDRKRMSVVVKDCHSGN-ISLLSKGADEAILP----YAHAGQQTRTFVEA------ 546
F S+RK MSVVVK HSG KGA E +L + + +
Sbjct: 478 YPFNSERKFMSVVVK--HSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCA 535
Query: 547 --VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
+E + LRT+CLA+R+ +E+ L +
Sbjct: 536 DVIEPLASDALRTICLAYRDFAPEEFPRKDYP----------------------NKGLTL 573
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI 664
+GV I+D L+ GV E ++ ++AGI M+TGD +TA IA +C ++
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--------- 624
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL------AI 718
G A+E K F L I
Sbjct: 625 ---------------------------------GGLAME------GKEFRSLVYEEMDPI 645
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGISGREGLQ 776
L + + R +P K LV +LK GDG ND ++ AD+G +GISG E
Sbjct: 646 LPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTE--V 703
Query: 777 AARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG-L 833
A A+D + F + R + GR Y+ Q+ L + + + +F+ +
Sbjct: 704 AKEASDIILLDDNFASIVRAV-KWGRNVYDNIRKFLQF----QLTVNVVAVILTFVGSCI 758
Query: 834 SGTSLFNSVSLMAYN 848
S TS +V L+ N
Sbjct: 759 SSTSPLTAVQLLWVN 773
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 2e-18
Identities = 101/422 (23%), Positives = 158/422 (37%), Gaps = 94/422 (22%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRC-CIGGI------FYGNETGDALKDVGLLNAITS 422
E L V I +DKTGTLT+N M + G+ N+ G+ + D +L+ +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT 378
Query: 423 GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482
V R L +CN +++A +L + AL+ + +
Sbjct: 379 --VAVSRILEAGNLCNNAK-FRNEADTLLGNPT---DVALIELLMKFGL----------- 421
Query: 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRT 542
+ Y + + F+S+RK M+V + KGA E +L Y
Sbjct: 422 ---DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYC-------- 470
Query: 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHD- 601
Y + +TL L + + D QE + AS+ L R+ E
Sbjct: 471 -----TYYQKKDGKTLTLT--QQQRDVIQE--EAAEMASAGL-----RVIAFASGPEKGQ 516
Query: 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQL 661
L LG+ I D + GV E + TL G+ M+TGD Q TA+ IA S +
Sbjct: 517 LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ--- 573
Query: 662 LSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSR 721
S+ G+ D +D L I+ +
Sbjct: 574 -SVSGEKLDA-------------------------MDDQQLS-------------QIVPK 594
Query: 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-A 780
A+ R +P K ++V+ L+ GDG ND ++ ADIGV + G+ G A+ A
Sbjct: 595 VAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEA 653
Query: 781 AD 782
AD
Sbjct: 654 AD 655
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 1e-13
Identities = 93/423 (21%), Positives = 145/423 (34%), Gaps = 139/423 (32%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
TAI E+LA ++ + +DKTGTLT N++ + N G DV L A+ S
Sbjct: 278 TAI-EELAGMDILCSDKTGTLTLNKLSIDEIL----PFFN--GFDKDDVLLYAALASREE 330
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
D QD + ++ + E +
Sbjct: 331 D------------------------------QD---------AIDTAVLGSAKDLKEARD 351
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545
Y++LE + F KR V+D +G ++KGA + IL ++ VE
Sbjct: 352 G-----YKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVE 406
Query: 546 A-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
V++ + G R L +A DE W
Sbjct: 407 EKVDELASRGYRALGVA----RTDEEGRWHF----------------------------- 433
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFISPEPKGQ 660
LG+ + D + ETIE R G+ M+TGD TA ++ L N + +
Sbjct: 434 LGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTAD---V 490
Query: 661 LLSID--GKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
LL D + +E DG+A
Sbjct: 491 LLKGDNRDDLPSGLGEMVED------------------ADGFA----------------- 515
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
V P K ++VE+L+ + GDG ND ++KAD+G+ ++G AA
Sbjct: 516 --------EVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG--ATDAA 565
Query: 779 RAA 781
R+A
Sbjct: 566 RSA 568
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 7e-12
Identities = 104/480 (21%), Positives = 164/480 (34%), Gaps = 120/480 (25%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKD-----VGLLNAITSGS 424
E L V I +DKTGT+T+ +MI R+ I +G + D D G ++ I S
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPR--FGTISIDNSDDAFNPNEGNVSGIPRFS 411
Query: 425 P-----------DV----------------------IRFLTVMAVCNTVIPAKSKAGAIL 451
P D+ I+ L A+ N K A
Sbjct: 412 PYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATD-C 470
Query: 452 YKAQSQDEEALVHAAAQ----LHMVLV----------NKNASILEIKFNGSVLQYEILET 497
+KA E +H A+ H L N +S+ + Q+E +
Sbjct: 471 WKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE 530
Query: 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-----YAHAGQQTRTFVEA------ 546
F S+ KRM+ + +D H ++ +KGA E I+ G + +
Sbjct: 531 FPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELII 590
Query: 547 --VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
+E + GLR L A + ++ K + E DL+
Sbjct: 591 ANMESLAAEGLRVLAFASKSFDKA--DNNDDQLKNETLNR-----------ATAESDLEF 637
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI 664
LG+ I D ++ +E +AGIN MLTGD TA IA I P
Sbjct: 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN-------- 689
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724
I + + V+ G + A ++ + A+
Sbjct: 690 -------------------FIHDRDEIMDSMVMTGSQFD--------ALSDEEVDDLKAL 722
Query: 725 C---CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781
C R P K +++E L GDG ND ++ A++G+ + G G A+ A
Sbjct: 723 CLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDA 781
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 8e-12
Identities = 117/451 (25%), Positives = 182/451 (40%), Gaps = 106/451 (23%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE--TGDALKDVGLLNAITSGSPDV 427
E L I +DKTGTLT+NRM + +++ N+ D +D + + S
Sbjct: 339 ETLGSTSTICSDKTGTLTQNRMT-----VAHMWFDNQIHEADTTEDQSGV-SFDKSSATW 392
Query: 428 IRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEAL---VHAAAQLHMVLVNKNASIL 481
+ + +CN V A + IL +A + D E AL + M + +N ++
Sbjct: 393 LALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVV 452
Query: 482 EIKFNGSVLQYEI-LETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA---- 536
EI FN S +Y++ + E D + + L+ KGA E IL +
Sbjct: 453 EIPFN-STNKYQLSIHENEDPRDPRHL-------------LVMKGAPERILERCSSILIH 498
Query: 537 GQQ-------TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589
G++ F A + LG R L + ++++ E + + D
Sbjct: 499 GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD--- 555
Query: 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649
+L +G+ ++ D + VP+ + R AGI M+TGD TA IA
Sbjct: 556 -----------NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604
Query: 650 CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE--PKDV-AFVVDGWAL---- 702
IS E ++E + + I S+ P+D A VV G L
Sbjct: 605 VGIIS----------------EGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 703 -----EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI----GDG 753
EI H TE+ + +RT +P QK +VE C R AI GDG
Sbjct: 649 SEQLDEILKYH-----TEI-VFART------SPQQKLIIVE---GCQ-RQGAIVAVTGDG 692
Query: 754 GNDVRMIQKADIGV--GISGREGLQAARAAD 782
ND ++KADIGV GI+G + + +AAD
Sbjct: 693 VNDSPALKKADIGVAMGIAGSDV--SKQAAD 721
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 2e-11
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 724 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783
+ RV+P QK Q+VE L+ + GDG ND ++KAD+G+ + + AAD
Sbjct: 430 VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMGAKA------AADI 483
Query: 784 SIGKFRFLK-RLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
+ + GR ++ ++ +L++ + + I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVII 532
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 1e-10
Identities = 70/293 (23%), Positives = 109/293 (37%), Gaps = 82/293 (27%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE---AILPYAHAGQQTRTFVEAV 547
Y ++ L F R+R+SVVV+D G L+ KGA E A+ + G R EA
Sbjct: 438 GYRKVDELPFDFVRRRLSVVVEDAQ-GQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 548 --------EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLE 599
E Y+ G R L +A RE+ E ++ A+ E
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPGGE---------------SRAQYSTAD-----E 536
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKG 659
DL + G D ++ I LR+ G+ +LTGD I A C + EP
Sbjct: 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD---NPIVTAKICREVGLEPGE 593
Query: 660 QLL--SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717
LL I+ + + R +E
Sbjct: 594 PLLGTEIEAMDDAALAREVE---------------------------------------- 613
Query: 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770
+ ++TP QK+++++ L++ + +GDG ND ++ AD VGIS
Sbjct: 614 ---ERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD--VGIS 661
|
Length = 903 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 3e-10
Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 82/287 (28%)
Query: 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAG------QQTRTFVEAV 547
+ F DR+R+SVVV++ + L+ KGA E +L G + ++ ++ +
Sbjct: 412 IPFDFDRRRLSVVVEN-RAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDM 470
Query: 548 -EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606
+ ++ G+R + +A + +L EA T D E L + G
Sbjct: 471 TAEMNRQGIRVIAVATK----------TLKVGEADFTKTD------------EEQLIIEG 508
Query: 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL--SI 664
D ++ E I L K GIN +LTGD + +I C + + LL I
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI---CQEVGIDANDFLLGADI 565
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724
+ +++E+ R L + I
Sbjct: 566 EELSDEELARELR-------------------------------------------KYHI 582
Query: 725 CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
R+TP QK++++ LLK + +GDG ND ++KAD+G+ +
Sbjct: 583 FARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 9e-10
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533
+Y + + F S+RKRMS V K L KGA E IL
Sbjct: 45 RYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 6e-08
Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 66/220 (30%)
Query: 73 LIFIFAVSATKEAWDDYNRYLSDKK----ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLR 128
++ + ++A EA+ +Y + K V++ G ++ I + ++ VG+IV L+
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 129 ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188
D VP D +I +G V+ +AL GE+ +
Sbjct: 62 PGDRVPADGRII-----EGSLEVDESALTGESLPVEK----------------------- 93
Query: 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248
+ +T+ + + E + TG +T+LG
Sbjct: 94 ----------------------------SRGDTVFAGTVVLSGE-LKVIVTATGEDTELG 124
Query: 249 -MTRGI--PEPKLTAVDAMIDKLTG--AIFVFQIVVVIVL 283
+ R + + T + ++DKL V + +++ L
Sbjct: 125 KIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFL 164
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-07
Identities = 70/307 (22%), Positives = 123/307 (40%), Gaps = 89/307 (28%)
Query: 492 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAGQQ---TRTFV 544
++ ++ + F +R+RMSVVV + ++ + L+ KGA E IL H G+ +
Sbjct: 441 WQKIDEIPFDFERRRMSVVVAE-NTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIML 499
Query: 545 EAVEQ----YSQLGLRTLCLAWREV--EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
+++ ++ GLR + +A + + E +YQ D
Sbjct: 500 RRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ------------RAD------------ 535
Query: 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658
E DL + G A D ++ ++ L+ +G+ +LTGD + A ++ C+ + +
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKV---CHEVGLDAG 592
Query: 659 GQLLS--IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716
L+ I+ ++DE+ E
Sbjct: 593 EVLIGSDIETLSDDELANLAE--------------------------------------- 613
Query: 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776
RT + R+TP K ++V LLK + +GDG ND ++ ADI GIS +
Sbjct: 614 ----RTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADI--GISVDGAVD 667
Query: 777 AAR-AAD 782
AR AAD
Sbjct: 668 IAREAAD 674
|
Length = 902 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 4e-06
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 62/227 (27%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVE 548
Q +EFT+ + RMS + D N ++ KGA +AI + A G +AV+
Sbjct: 365 QSLHATFVEFTA-QTRMSGINLD----NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVD 419
Query: 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVT 608
Q ++ G L VC+ D ++ GV
Sbjct: 420 QVARQGGTPLV----------------------------------VCE----DNRIYGVI 441
Query: 609 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC---NFIS---PEPK---- 658
++D ++ G+ E LRK GI M+TGD + TA IA +FI+ PE K
Sbjct: 442 YLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALI 501
Query: 659 ------GQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
G+L+++ G T D + V + M T K+ A +VD
Sbjct: 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVD 548
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 5e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
K++GV A+ D L+ E I L+ GI MLTGD + TA IA
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 5e-05
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
++ GV A+ D+L+ E I+ L++ GI MLTGD + TA +A
Sbjct: 404 ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA 448
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 9e-05
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIA 647
++LGV A+ D+L+ E I L++AG I MLTGD ++ A +A
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 46/232 (19%), Positives = 68/232 (29%), Gaps = 66/232 (28%)
Query: 540 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE---WSLMFKEASSTLIDREWRIAEVCQ 596
V E + L +A + + L+ + L E +
Sbjct: 15 GEPVVPEAEALLEA-AAALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRA 73
Query: 597 RLE----HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
DL VLG+ A+ D L G E ++ L++AGI +LTGD + TA IA
Sbjct: 74 GATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIA----- 128
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKA 712
+LL + D D + L K K
Sbjct: 129 -------RLLGLF--------------------------DALVSADLYGLVGVGKPDPKI 155
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764
F +E L L +GDG ND+ + A
Sbjct: 156 F--------------------ELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ ++LGV ++D ++ G+ E LRK GI M+TGD TA IA
Sbjct: 434 ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481
|
Length = 681 |
| >gnl|CDD|237437 PRK13582, thrH, phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767
P K Q V+ LKS YR +A GD ND M+ +AD G+
Sbjct: 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI 167
|
Length = 205 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS 675
+ V E IE L++ ++ + T D E + +
Sbjct: 82 EDVKEIIEYLKENNLSILLYTDDG--------AYILNDVSEKIVREERYVKSFVLVIDDF 133
Query: 676 LERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTA-ICCRVTP--SQ 732
+ + + V D L+ K ++ F L ++ + + P
Sbjct: 134 EL-------LEDEDINKILIVTDPEDLDELEKELKELFGSLITITSSGPGYLEIMPKGVS 186
Query: 733 KA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGK 787
K L + L +A GDG ND+ M++ A +GV + + ++A AADY G
Sbjct: 187 KGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKA--AADYVTGS 244
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 0.001
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ VLG+ A++D L+ + I L+ GI MLTGD A IA
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA 602
|
Length = 741 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL--QAARAADYSI 785
P KA+++ LK + + +G+G ND+ +++AD+G+ +EG+ + AD +
Sbjct: 79 PEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 0.001
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 46/154 (29%)
Query: 496 ETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQL 553
+ F++ + RMS V D + KGA +AI Y ++ G AV++ ++
Sbjct: 370 TFVPFSA-QTRMSGVDLDGRE-----IRKGAVDAIRRYVESNGGHFPAELDAAVDEVARK 423
Query: 554 GLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 613
G L +A D +VLGV ++D
Sbjct: 424 GGTPLVVA--------------------------------------EDNRVLGVIYLKDI 445
Query: 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
++ G+ E LRK GI M+TGD TA IA
Sbjct: 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 479
|
Length = 679 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 747 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787
T+A+GDG ND+ MI+ A +G+ + + LQ + AD I K
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQ--QKADICINK 209
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.002
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIA 647
D LG + D + E I L+ GI MLTGD++ A ++A
Sbjct: 350 DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA 397
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 94 SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVET 153
S K ++ V++ G K I ++ + VG++V ++ D +P DL +I C V+
Sbjct: 134 SFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDN 189
Query: 154 AALDGETDLKTR 165
++L GE++ +TR
Sbjct: 190 SSLTGESEPQTR 201
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 733 KAQLVELLKSCDY---RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789
L EL T+A GD ND+ M++ A + + ++ + L+A R
Sbjct: 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWPIDLR 205
Query: 790 FLKRLI 795
+ L+
Sbjct: 206 AVLYLL 211
|
Length = 212 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 944 | |||
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.85 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.54 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.52 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.51 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.5 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.48 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.44 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.42 | |
| PLN02887 | 580 | hydrolase family protein | 99.41 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.4 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.4 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.37 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.34 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.34 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.32 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.27 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.25 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.11 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.04 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.02 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.96 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.94 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.9 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.9 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.84 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.84 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.83 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.82 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.8 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.79 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.76 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 98.72 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.62 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.58 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.57 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.56 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.51 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.38 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.25 | |
| PLN02423 | 245 | phosphomannomutase | 98.23 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.23 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.19 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.15 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.03 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.02 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.98 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.92 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.88 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.85 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.83 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.82 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.73 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.71 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.69 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.65 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.6 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.59 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.58 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.56 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.46 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 97.42 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.42 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.42 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.4 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.4 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.35 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.3 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.29 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.26 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 97.22 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.07 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.05 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.98 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.92 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.9 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.88 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.77 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.61 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.6 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.59 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.57 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.55 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.51 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.5 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.45 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.45 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.41 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.32 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.29 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.1 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.08 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.08 | |
| PLN02940 | 382 | riboflavin kinase | 96.0 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.95 | |
| PLN02151 | 354 | trehalose-phosphatase | 95.88 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.83 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.63 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.58 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.48 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.39 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.32 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.27 | |
| PLN02811 | 220 | hydrolase | 95.2 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.14 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.11 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.08 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.07 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.96 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 94.82 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.79 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.77 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.75 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.61 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 94.32 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.12 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 93.8 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 93.71 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 93.7 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 93.39 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 92.8 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.51 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.16 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.89 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 91.58 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 91.39 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 91.25 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 91.2 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.71 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 90.51 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 90.41 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 88.09 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 88.05 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 88.0 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.95 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 87.43 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 87.02 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 86.78 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 86.78 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 86.2 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 85.58 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 85.51 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 85.13 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 84.17 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 84.01 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 82.43 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 81.79 |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-144 Score=1322.95 Aligned_cols=932 Identities=34% Similarity=0.589 Sum_probs=799.3
Q ss_pred ccEEEEcCCcc--ccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHH
Q 002275 2 KRYIYINDDET--SQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAV 79 (944)
Q Consensus 2 ~r~~~~~~~~~--r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i 79 (944)
.|.||+|+.+. .+.+|+.|++.++||++|+|||++||+||++++|+|||+++++++++.+++.++.++++|+++++++
T Consensus 70 ~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v 149 (1178)
T PLN03190 70 ARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLV 149 (1178)
T ss_pred ceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHH
Confidence 59999998753 2347999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCC
Q 002275 80 SATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (944)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGE 159 (944)
++++++++|++|++++++.|+++++|+|+|++++++|++|+|||||+|++||++|||+++++|++++|.|+||||+||||
T Consensus 150 ~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGE 229 (1178)
T PLN03190 150 TAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGE 229 (1178)
T ss_pred HHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEE
Q 002275 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (944)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~ 239 (944)
|.|+.|.+...+... .....++.|.++|+.|+.++++|+|++++. +...+++.+|+++|||.+++++|++|+|+
T Consensus 230 t~~k~k~~~~~~~~~-~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~-----~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 230 SNLKTRYAKQETLSK-IPEKEKINGLIKCEKPNRNIYGFQANMEVD-----GKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred eeeeEecccchhhhc-chhhhhceEEEEEeCCCccceeEEEEEEEC-----CCcccCCccceeeccceecCCceEEEEEE
Confidence 999999887654422 123456789999999999999999999974 34467899999999999999999999999
Q ss_pred EecCCceeeccCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCC----------c--
Q 002275 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE----------F-- 307 (944)
Q Consensus 240 ~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------~-- 307 (944)
|||++|+++++...++.|.+++++.+|+++.+++++.+++++++++++..|........||+.+... .
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 9999999999988888899999999999999999888888888877766665422223344321100 0
Q ss_pred -ch-hhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCc
Q 002275 308 -PW-YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (944)
Q Consensus 308 -~~-~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGT 385 (944)
.+ ...+..++++++++..+||++|+|++++++..++++|++|.+|++...+.++.+|+.+++|+||+|++||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 01 1224455666778889999999999999999999999999999999988889999999999999999999999999
Q ss_pred ccccceEEEEEEEcCEeecCCCCCC----------------------CCchhhhhhhcC-----CChhHHHHHHHhhhcc
Q 002275 386 LTENRMIFRRCCIGGIFYGNETGDA----------------------LKDVGLLNAITS-----GSPDVIRFLTVMAVCN 438 (944)
Q Consensus 386 LT~~~~~v~~i~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~-----~~~~~~~~~~~~~~c~ 438 (944)
||+|+|.+++|++++..|+...... ..+..+...... ..+.+.+++.++++||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999998886421100 001111111100 0123568999999999
Q ss_pred eecccccC---C---CceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEE
Q 002275 439 TVIPAKSK---A---GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVK 512 (944)
Q Consensus 439 ~~~~~~~~---~---~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~ 512 (944)
++.+...+ + +.+.|.++||+|.||+++|+++|+.+..++++.+.+...+....|++++.+||+|+||||||+++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~ 623 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILG 623 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEE
Confidence 99875211 2 23568899999999999999999999999999999999899999999999999999999999999
Q ss_pred ecCCCcEEEEecCchhhcccccccC---CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHH
Q 002275 513 DCHSGNISLLSKGADEAILPYAHAG---QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589 (944)
Q Consensus 513 ~~~~~~~~l~~KGa~e~i~~~~~~~---~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~ 589 (944)
++ ++++++|+||||+.|+++|... ...+++.+++++|+.+|+|||++|||.++++++.+|...|.++..++.+|++
T Consensus 624 ~~-~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 624 CP-DKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred cC-CCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 75 5678999999999999999743 3356788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCH
Q 002275 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669 (944)
Q Consensus 590 ~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~ 669 (944)
.+++..+++|+||+++|+++++|++|++++++|++|+++||++||+|||+..+|.++|++||++.++.. .+.+++...
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~--~i~i~~~~~ 780 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMT--QIIINSNSK 780 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCe--eEEecCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999988654 444554443
Q ss_pred HHHHHHHHHHHHHhh--------------cccCCCCcEEEEEcchhHHHHHH-HHHHHHHhhhhccceeEEEEeChhhHH
Q 002275 670 DEVCRSLERVLLTMR--------------ITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKA 734 (944)
Q Consensus 670 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~lv~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~p~~K~ 734 (944)
+.....++....... .......+..++++|..+..+.+ ...+.|.++...++.++|||++|.||+
T Consensus 781 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa 860 (1178)
T PLN03190 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKA 860 (1178)
T ss_pred hhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHH
Confidence 333222222111000 00112345789999999998875 355677788888888899999999999
Q ss_pred HHHHHHhhc-CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHHHhhhhhhhhhhhhhhHHhh
Q 002275 735 QLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYS 813 (944)
Q Consensus 735 ~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~ 813 (944)
++|+.+|+. ++.|+|+|||.||++||++|||||+++|.++.+|+.+|||++..|++|.+|+++|||++|.|+..++.|.
T Consensus 861 ~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 861 GIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999987 5789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHh-hhhccCCCChhhhhcCCccccccccCCCCChHHHH
Q 002275 814 FYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFA 892 (944)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 892 (944)
||||+++.++++||+++++|+|+++|+++.+.+||++||.+|++ ++++|+|.+++.++++|++|+.++++..++.+.|+
T Consensus 941 fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~ 1020 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHH
Confidence 99999999999999999999999999999999999999999999 56999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCcchhhhhHHHHHHHHHHHHHhhhee
Q 002275 893 GWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALE 942 (944)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 942 (944)
.|++.++|||+++||++++.+.....+......++++.+++...+.++++
T Consensus 1021 ~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~ 1070 (1178)
T PLN03190 1021 LTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMD 1070 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHH
Confidence 99999999999999999887764332322333444455555555554443
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-137 Score=1276.25 Aligned_cols=920 Identities=40% Similarity=0.704 Sum_probs=791.8
Q ss_pred CCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHHHhhhhH
Q 002275 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDK 96 (944)
Q Consensus 17 ~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~~~~~~~~ 96 (944)
|++|++.++||++|+|+|+.||+||++++|+|||+++++++++.+++.++.++++|+++++++++++++++|++|+++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 78999999999999999999999999999999999999999998888888899999999999999999999999999999
Q ss_pred HhcceEEEEEEC-CeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeeccccccCC-
Q 002275 97 KANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGM- 174 (944)
Q Consensus 97 ~~~~~~~~V~r~-g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~- 174 (944)
+.|+++|+|+|+ |++++++|+||+|||||.|++||+||||++|++|++++|.|+||||+|||||.|+.|++...+...
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 899999999999999999999999999999999999889999999999999999999987655433
Q ss_pred CHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccCCCC
Q 002275 175 DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIP 254 (944)
Q Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~~~~ 254 (944)
..+.+..++|.++|+.|+.++++|+|++++.+ .+..|++.+|++++||.+++++|++|+|++||++|+++++....
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~----~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~ 236 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTING----DRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQA 236 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECC----CCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCC
Confidence 34556778999999999999999999999843 14568899999999999999889999999999999999998888
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCC--CcchhhhhHhHHHHHHHhccccceEEE
Q 002275 255 EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ--EFPWYELLVIPLRFELLCSIMIPISIK 332 (944)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~iP~~l~ 332 (944)
+.|.+++++.+|+++.+++.++++++++.+++...|........||+.... .......+..+++++.+++.++|++|+
T Consensus 237 ~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~ 316 (1057)
T TIGR01652 237 PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLY 316 (1057)
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeee
Confidence 889999999999999998888888888777766566543333357764221 111223344456677789999999999
Q ss_pred eeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCC---
Q 002275 333 VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGD--- 409 (944)
Q Consensus 333 v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~--- 409 (944)
+++++++.++++|+++|.+|++++.+.++.+|+.+++|+||+|++||+|||||||+|+|++++|++++..|+.....
T Consensus 317 v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~ 396 (1057)
T TIGR01652 317 VSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKD 396 (1057)
T ss_pred ehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHH
Confidence 99999999999999999999998877789999999999999999999999999999999999999999888642110
Q ss_pred -----------------------CCCchhhhhhhc---CCChhHHHHHHHhhhcceecccc--cCCCceeeecCCccHHH
Q 002275 410 -----------------------ALKDVGLLNAIT---SGSPDVIRFLTVMAVCNTVIPAK--SKAGAILYKAQSQDEEA 461 (944)
Q Consensus 410 -----------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~c~~~~~~~--~~~~~~~~~~~~p~e~a 461 (944)
.+.+.++.+... ...+...++++++++||++.+.. ++++.+.|.++||+|.|
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~A 476 (1057)
T TIGR01652 397 AIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAA 476 (1057)
T ss_pred HhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHH
Confidence 000111111111 11234678999999999998874 22244778899999999
Q ss_pred HHHHHHhCCeEEEeecCc--EEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC--
Q 002275 462 LVHAAAQLHMVLVNKNAS--ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-- 537 (944)
Q Consensus 462 ll~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~-- 537 (944)
++++|+..|+.+.+++.+ .+.++..+....|++++.+||+|+||||||+++++ ++++++|+||||+.|+++|...
T Consensus 477 Ll~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~-~~~~~l~~KGA~e~il~~~~~~~~ 555 (1057)
T TIGR01652 477 LVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIFKRLSSGGN 555 (1057)
T ss_pred HHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeC-CCeEEEEEeCcHHHHHHHhhccch
Confidence 999999999999988877 45556677788999999999999999999999986 4678999999999999999742
Q ss_pred CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCC
Q 002275 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (944)
Q Consensus 538 ~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~ 617 (944)
...+++.+++++++.+|+||+++|||.++++++.+|.++|.++..++.+|++.+++.++++|+||+|+|+++++|++|++
T Consensus 556 ~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~ 635 (1057)
T TIGR01652 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEG 635 (1057)
T ss_pred hHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhc
Confidence 23567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHH---HHHHHHHHHhh---cccCCCC
Q 002275 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC---RSLERVLLTMR---ITTSEPK 691 (944)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~ 691 (944)
++++|+.|+++||++||+|||+.+||.++|++||++..+.. ++.+++...++.. ..+........ .......
T Consensus 636 v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 636 VPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNME--QIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred cHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCe--EEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999987554 5555554433221 11111111000 0112245
Q ss_pred cEEEEEcchhHHHHHHH-HHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc-CCeEEEecCCccchhhhhhcCeeEEe
Q 002275 692 DVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
+..++++|+.++.+.+. .+++|.++...++..+|||++|+||+++|+.+|+. |+.|+|+|||.||++||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 67889999999877664 35667777777788899999999999999999997 99999999999999999999999999
Q ss_pred cccchHHHhhhCcEeeccccchhHHHhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhh
Q 002275 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNV 849 (944)
Q Consensus 770 ~gn~~~~~k~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 849 (944)
+|+++.+++.+||+++.+|+++.++++.|||++|.|+++++.|.+|+|+++.++++++.++++++|.++|++++++|+|+
T Consensus 794 ~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~ 873 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNV 873 (1057)
T ss_pred cChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 89998889999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhh-hccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccC-------cchh
Q 002275 850 FYTSIPVLVS-TIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEK-------SEME 921 (944)
Q Consensus 850 ~~~~~~~~~~-~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 921 (944)
+++.+|++++ .+|+|++++.++++|.+|+.++++..++.++|+.|++.+++|++++++++++.+.... .+..
T Consensus 874 ~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~ 953 (1057)
T TIGR01652 874 FFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFS 953 (1057)
T ss_pred HHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchh
Confidence 9999999965 7889999999999999999999999999999999999999999999999888776522 2345
Q ss_pred hhhHHHHHHHHHHHHHhhheec
Q 002275 922 EVSMVALSGCIWLQAFVVALET 943 (944)
Q Consensus 922 ~~~~~~f~~~~~~~~~~~~~~~ 943 (944)
..+++.|+.+++...+.+++++
T Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~ 975 (1057)
T TIGR01652 954 SVGVIVFTALVVIVNLKIALEI 975 (1057)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 6777788888888777766554
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-140 Score=1231.27 Aligned_cols=902 Identities=43% Similarity=0.732 Sum_probs=802.1
Q ss_pred ccEEEEcCC---ccccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHH
Q 002275 2 KRYIYINDD---ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFA 78 (944)
Q Consensus 2 ~r~~~~~~~---~~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 78 (944)
.|.+|.|+. +.+..+|..|+++++||++++|+|++||+||+++.|+|||+++++++++ +.+.++..+.+|+++++.
T Consensus 14 ~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~~vl~ 92 (1151)
T KOG0206|consen 14 SRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLLFVLG 92 (1151)
T ss_pred ceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeeceeeeeh
Confidence 489999996 3456799999999999999999999999999999999999999999999 789999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHhcceEEEEEECCe-EEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEecccc
Q 002275 79 VSATKEAWDDYNRYLSDKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (944)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~-~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~Lt 157 (944)
+++++++++|++|+++|+++|+++|.|.|++. +++..|++|+|||+|.+..+|.+|||.+||+|++++|.|+|++++|+
T Consensus 93 ~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 93 ITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 99999999999999999999999999999644 89999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeccccccCC-CHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEE
Q 002275 158 GETDLKTRLIPAACMGM-DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (944)
Q Consensus 158 GEs~p~~K~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~ 236 (944)
||++++.|++...+... ..+...+..+.++|+.|+.+++.|+|++...+ ...|+..+|++++||.++|++|++|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~-----~~~pl~~~~~Llrg~~lrNT~~v~G 247 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQG-----QIYPLSPDNLLLRGSRLRNTEWVYG 247 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeecc-----CCCCCcHHHcccCCceeccCcEEEE
Confidence 99999999987666553 24457788999999999999999999998532 1128899999999999999999999
Q ss_pred EEEEecCCceeeccCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccc---cceeeecCCCcchhhhh
Q 002275 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEAR---KQWYVLYPQEFPWYELL 313 (944)
Q Consensus 237 ~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 313 (944)
+|++||++|+++++...++.|++++++.+|.....++++.++++++..+...+|...... ..||+.... .....+
T Consensus 248 ~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 325 (1151)
T KOG0206|consen 248 VVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE--AAYAGF 325 (1151)
T ss_pred EEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch--HHHHHH
Confidence 999999999999999999999999999999999998888888888888777666653211 245554322 333455
Q ss_pred HhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEE
Q 002275 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (944)
Q Consensus 314 ~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 393 (944)
..++++.+++..++|++|++++++.+..++.||++|.+|++.+.+.++.+|+.++.|+||+|++|++|||||||+|.|.+
T Consensus 326 ~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F 405 (1151)
T KOG0206|consen 326 VHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEF 405 (1151)
T ss_pred HHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeee
Confidence 66677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCEeecCCCCC---------------------CCCchhhhhhhcC---CChhHHHHHHHhhhcceecccccCC-C
Q 002275 394 RRCCIGGIFYGNETGD---------------------ALKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAKSKA-G 448 (944)
Q Consensus 394 ~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~c~~~~~~~~~~-~ 448 (944)
++|+++|..|+..... .+.+..+.+.... ..+...++++++++||++.+..+++ +
T Consensus 406 ~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~ 485 (1151)
T KOG0206|consen 406 KKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG 485 (1151)
T ss_pred ecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc
Confidence 9999999988764221 1122222222222 3456779999999999999988444 4
Q ss_pred ceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchh
Q 002275 449 AILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE 528 (944)
Q Consensus 449 ~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e 528 (944)
.+.|++.+|+|.|++++|++.|+.+..++++.+.+...+....|+++..+||+|.|||||||||++ +|++.+|+|||+.
T Consensus 486 ~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p-~g~i~LycKGADs 564 (1151)
T KOG0206|consen 486 KLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP-DGRILLYCKGADS 564 (1151)
T ss_pred ceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC-CCcEEEEEcCcch
Confidence 889999999999999999999999999999999998777778999999999999999999999998 5799999999999
Q ss_pred hcccccccCC--chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEee
Q 002275 529 AILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606 (944)
Q Consensus 529 ~i~~~~~~~~--~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG 606 (944)
+|.+++..+. ..++..+++++|+.+|+|++|+|||.++++|+.+|.++|.++..++.+|++.+++.++.+|+||+++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 9999998532 34566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCH------HHHH---HHHH
Q 002275 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVC---RSLE 677 (944)
Q Consensus 607 ~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~------~~~~---~~~~ 677 (944)
.+++||+++++++++|++|++||||+|++|||..+||.+++.+|+++.++.. .+.++.... +... +.+.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~--~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMK--LIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCce--EEEEecCChhhhcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998876 444433321 1111 1111
Q ss_pred H----HHHHhhcccCCCCcEEEEEcchhHHHHHHH-HHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh-cCCeEEEec
Q 002275 678 R----VLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIG 751 (944)
Q Consensus 678 ~----~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~-~~~~v~~iG 751 (944)
. ........... ...+++++|+.+.+.++. .+..|.++...|+.++|||++|.||+.+|+..++ .+..++|||
T Consensus 723 ~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIG 801 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIG 801 (1151)
T ss_pred HhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEee
Confidence 1 11111111111 478999999999988876 5568889999999999999999999999999975 478999999
Q ss_pred CCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHHHhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhh
Q 002275 752 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831 (944)
Q Consensus 752 Dg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (944)
||.||++|++.|||||+++|.++.+|..+||+.+..|+++.+++++|||+.|.|+++++.|.||||+.+++++|||.+++
T Consensus 802 DGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~ 881 (1151)
T KOG0206|consen 802 DGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFN 881 (1151)
T ss_pred CCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhhHHHHhhhhhhhhhHh-hhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhh
Q 002275 832 GLSGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISI 910 (944)
Q Consensus 832 ~~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (944)
+|+|++++..+++.+||++|+.+|++ .+.+|+|++.+.+++.|.+|+.++++..++++.|+.|++.+++|++++||+++
T Consensus 882 gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~ 961 (1151)
T KOG0206|consen 882 GFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPY 961 (1151)
T ss_pred CCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeH
Confidence 99999999999999999999999999 66999999999999999999999999999999999999999999999999999
Q ss_pred hhhcc
Q 002275 911 HVYAY 915 (944)
Q Consensus 911 ~~~~~ 915 (944)
.++..
T Consensus 962 ~~~~~ 966 (1151)
T KOG0206|consen 962 LVFEE 966 (1151)
T ss_pred hhhee
Confidence 88853
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-125 Score=1008.56 Aligned_cols=892 Identities=34% Similarity=0.564 Sum_probs=783.0
Q ss_pred cEEEEcCC-ccccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHH
Q 002275 3 RYIYINDD-ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSA 81 (944)
Q Consensus 3 r~~~~~~~-~~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~ 81 (944)
|++-+... ..++++|.+|.+.+.||.+++|+|..+++||+.+.|+|||+.+..++++.+.-..+.++|.|+.+++.++.
T Consensus 64 rt~~~~~~~~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl 143 (1051)
T KOG0210|consen 64 RTVNISFGPHYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITL 143 (1051)
T ss_pred ceeecccCCCcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHH
Confidence 44444332 25889999999999999999999999999999999999999999999988777777889999999999999
Q ss_pred HHHHHHHHHHhhhhHHhcceEEEEE-ECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCC
Q 002275 82 TKEAWDDYNRYLSDKKANEKEVWVV-KQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (944)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~V~-r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs 160 (944)
++++.+|++|++.|+..|+...+++ |+|.... |+++|+|||+|.+..|++||||+++|.+++++|+|++.+..||||+
T Consensus 144 ~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGET 222 (1051)
T KOG0210|consen 144 IKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGET 222 (1051)
T ss_pred HHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcc
Confidence 9999999999999999999998887 6665444 9999999999999999999999999999999999999999999999
Q ss_pred CceeeeccccccCCCHh-hhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEE
Q 002275 161 DLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (944)
Q Consensus 161 ~p~~K~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~ 239 (944)
..+.|.|.+.++..+.+ .+.+++ +..+.|..++++|-|++++.+ ++++++++.+|++|++|.+.+| .++|+|+
T Consensus 223 DWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d---~~~~~~LsventLWanTVvAs~-t~~gvVv 296 (1051)
T KOG0210|consen 223 DWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITD---SDKPESLSVENTLWANTVVASG-TAIGVVV 296 (1051)
T ss_pred cceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEec---CCCCCcccccceeeeeeeEecC-cEEEEEE
Confidence 99999999888877654 566666 788999999999999999853 3445899999999999999999 5999999
Q ss_pred EecCCceeeccCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHH
Q 002275 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRF 319 (944)
Q Consensus 240 ~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (944)
|||.+|+..++...++.|-.-++..+|.+.++++.+++++++++...-. -+..|+-. .++|
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g----------------~~~~wyi~---~~Rf 357 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG----------------FGSDWYIY---IIRF 357 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc----------------CCCchHHH---HHHH
Confidence 9999999999999999999999999999999999888887776654321 11233332 3678
Q ss_pred HHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEc
Q 002275 320 ELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIG 399 (944)
Q Consensus 320 ~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~ 399 (944)
+++++..+|++|-+.+++++.+.+..++.|.++ .+..+|++++-|+||+++++.+|||||||+|+|.+++++++
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLG 431 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLG 431 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeee
Confidence 889999999999999999999999977777655 34679999999999999999999999999999999999999
Q ss_pred CEeecCCCCCCCCc--hhhh----------hh--hcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHH
Q 002275 400 GIFYGNETGDALKD--VGLL----------NA--ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (944)
Q Consensus 400 ~~~~~~~~~~~~~~--~~~~----------~~--~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~ 465 (944)
-..|..+..+.... ++.. .. -...+..+.+...++++||+++|..+++|...|++.+|+|.|++++
T Consensus 432 Tv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkw 511 (1051)
T KOG0210|consen 432 TVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKW 511 (1051)
T ss_pred eeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEe
Confidence 87776542221110 0000 00 0112334678999999999999999999999999999999999999
Q ss_pred HHhCCeEEEeecCcEEEEEEC-CeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHHH
Q 002275 466 AAQLHMVLVNKNASILEIKFN-GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (944)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (944)
....|..+..|+.+.+....+ +...+|+++..+||+|+.|||++||+++.++++.+|.|||+..|...... .++++
T Consensus 512 Te~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---NdWle 588 (1051)
T KOG0210|consen 512 TETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---NDWLE 588 (1051)
T ss_pred eeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---chhhh
Confidence 999999999999998887664 56689999999999999999999999998999999999999999887643 47889
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHH-HHhccceEeeEeccccccCCChHHHHH
Q 002275 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ-RLEHDLKVLGVTAIEDRLQDGVPETIE 623 (944)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~l~~lG~i~~~d~lr~~~~~aI~ 623 (944)
+...+|+.+|+|++++|+|.++++|++.+...|++|+.+..||++++.+..+ .+|+||+++|+.|+||+++++++.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 9999999999999999999999999999999999999999999999999887 899999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecC-CCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhH
Q 002275 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (944)
Q Consensus 624 ~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~ 702 (944)
.||+||||+||+|||..+||..+|+..+++..++. +..+.. ....+...+++.. ....+.+++++|+++
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~--ihv~~~v~sr~dah~eL~~l--------R~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQY--IHVIRSVTSRGDAHNELNNL--------RRKTDCALVIDGESL 738 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCce--EEEEEecCCchHHHHHHHHh--------hcCCCcEEEEcCchH
Confidence 99999999999999999999999999999987664 333322 2233444433332 245678999999999
Q ss_pred HHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc-CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhC
Q 002275 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (944)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~A 781 (944)
+..++.++++|.++.+.+..+++||++|.||+++++.+++. +..|+|+|||.||++|+++||+||++-|+++.++.-+|
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 99999999999999999999999999999999999999985 88999999999999999999999999999999999999
Q ss_pred cEeeccccchhHHHhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhc
Q 002275 782 DYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI 861 (944)
Q Consensus 782 d~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 861 (944)
|+.++.|..+.+++++|||.+|.|.+++-+|.+.++++++.+|..|.....|...++|..+.|..|..++|.+|.+++..
T Consensus 819 DfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~ 898 (1051)
T KOG0210|consen 819 DFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVL 898 (1051)
T ss_pred cccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeee
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred cCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccCcchhhhhHHHHHHHHHHHHHhhhe
Q 002275 862 DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 862 ~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
|+|+.++..+.+|++||--..++.++.++|+.|++.++|||.++.+..+..+...-.. ..++.|+.+++.+++.+++
T Consensus 899 d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~ef~~---ivaisFtaLi~tELiMVaL 975 (1051)
T KOG0210|consen 899 DRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDTEFIH---IVAISFTALILTELIMVAL 975 (1051)
T ss_pred cccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhhhheE---eeeeeeHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998866555443222 2355677777777766665
Q ss_pred e
Q 002275 942 E 942 (944)
Q Consensus 942 ~ 942 (944)
.
T Consensus 976 t 976 (1051)
T KOG0210|consen 976 T 976 (1051)
T ss_pred h
Confidence 4
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-110 Score=1013.97 Aligned_cols=761 Identities=28% Similarity=0.392 Sum_probs=614.9
Q ss_pred cccccCCCceeeeccc-cccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccc-cchhhhHHHHHHHHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPA-STWGPLIFIFAVSATKEAWDDY 89 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~i~~i~~~~~~~~~~ 89 (944)
+|+++||.|+++..+. ++| ..++.||+++++++++++++++++... ..+. ..+..++.+++++++.+++|++
T Consensus 52 ~r~~~~G~N~~~~~~~~~~~----~~fl~~f~~~~~~iL~~~a~~s~~~~~--~~~~~~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 52 RRLKKYGPNELPEEKKRSLL----KKFLRQFKDPFIILLLVAALLSAFVGD--WVDAGVDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHhhcCCccccccccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhhc--ccccCcceeeehHHHHHHHHHHHHHHH
Confidence 5888999999998765 555 889999999998888888888776441 1111 3344566677788888899999
Q ss_pred HHhh---hhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeee
Q 002275 90 NRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (944)
Q Consensus 90 ~~~~---~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~ 166 (944)
++.+ +++++.+.+++|+|||++++|++++|||||||.|+.||+||||++|+++++ +.||||+|||||.|+.|.
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K~ 201 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEKQ 201 (917)
T ss_pred HHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhcc
Confidence 9865 467778899999999999999999999999999999999999999998876 699999999999999996
Q ss_pred ccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCce
Q 002275 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (944)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~ 246 (944)
+..... .+.| ..++..|++|+||.+.+| .+.|+|++||.+|+
T Consensus 202 ~~~~~~---------------~~~~----------------------~~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T~ 243 (917)
T COG0474 202 ALPLTK---------------SDAP----------------------LGLDRDNMLFSGTTVVSG-RAKGIVVATGFETE 243 (917)
T ss_pred cccccc---------------cccc----------------------ccCCccceEEeCCEEEcc-eEEEEEEEEcCccH
Confidence 532110 0000 002578999999999999 69999999999999
Q ss_pred eeccCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHHh
Q 002275 247 LGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (944)
Q Consensus 247 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (944)
.|++... .....+|+++.++++...++.++++++++.++.+... ....|...+..++ .++
T Consensus 244 ~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~v---~l~ 306 (917)
T COG0474 244 FGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFR--------------GGNGLLESFLTAL---ALA 306 (917)
T ss_pred HHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------cCccHHHHHHHHH---HHH
Confidence 9998763 2257799999999999999888888887777665211 1112555555444 488
Q ss_pred ccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEee
Q 002275 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (944)
Q Consensus 324 ~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~ 403 (944)
+.++|++||+.++++..+++. +|.+++ +.+|+++++|+||++++||||||||||+|+|+|++++..+.
T Consensus 307 va~IPegLp~~vti~la~g~~------~mak~~----~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~-- 374 (917)
T COG0474 307 VAAVPEGLPAVVTIALALGAQ------RMAKDN----AIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG-- 374 (917)
T ss_pred HhccccchHHHHHHHHHHHHH------HHHhcc----chhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--
Confidence 899999999999998888887 444443 67899999999999999999999999999999999999851
Q ss_pred cCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEE
Q 002275 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483 (944)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~ 483 (944)
..+.+ + .....++...+++.++++||+..+..+ + ++..+||+|.|+++++.+.|... ..
T Consensus 375 -~~~~~---~-----~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~---~~----- 433 (917)
T COG0474 375 -GKDID---D-----KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL---DL----- 433 (917)
T ss_pred -ccccc---c-----cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC---CH-----
Confidence 00000 0 111233445578999999999887655 3 67789999999999999988633 10
Q ss_pred EECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhccccccc--------CCchhHHHHHHHHHHhccc
Q 002275 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--------GQQTRTFVEAVEQYSQLGL 555 (944)
Q Consensus 484 ~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~--------~~~~~~~~~~~~~~~~~G~ 555 (944)
......+++++++||+|+||||+++++.. ++++++++|||||.|+++|+. +..++.+.+..++|+.+|+
T Consensus 434 --~~~~~~~~~~~~~PFdS~rKrMsviv~~~-~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~gl 510 (917)
T COG0474 434 --SGLEVEYPILAEIPFDSERKRMSVIVKTD-EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGL 510 (917)
T ss_pred --HHHhhhcceeEEecCCCCceEEEEEEEcC-CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 22344568899999999999999999954 455999999999999999974 2345778899999999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEE
Q 002275 556 RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635 (944)
Q Consensus 556 rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~ 635 (944)
||+++|||.++.++... .. ++.|+||+|+|+++|+||+|++++++|+.|+++||++||+
T Consensus 511 Rvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~Mi 569 (917)
T COG0474 511 RVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMI 569 (917)
T ss_pred HHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEE
Confidence 99999999776543210 01 4678999999999999999999999999999999999999
Q ss_pred cCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHh
Q 002275 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715 (944)
Q Consensus 636 TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~ 715 (944)
|||+..||.++|++||+...... .++++|..++...++. +.+
T Consensus 570 TGD~~~TA~aIa~~~Gi~~~~~~-----------------------------------~~vi~G~el~~l~~~e---l~~ 611 (917)
T COG0474 570 TGDHVETAIAIAKECGIEAEAES-----------------------------------ALVIDGAELDALSDEE---LAE 611 (917)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCc-----------------------------------eeEeehHHhhhcCHHH---HHH
Confidence 99999999999999998544221 3466777766655441 111
Q ss_pred hhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-
Q 002275 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL- 794 (944)
Q Consensus 716 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l- 794 (944)
. ..+..+|||++|+||.++|+.+|+.|+.|+|+|||.||+||||.|||||||.+++.+.++++||+++.++++....
T Consensus 612 ~--~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~ 689 (917)
T COG0474 612 L--VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVL 689 (917)
T ss_pred H--hhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHH
Confidence 1 1223499999999999999999999999999999999999999999999994444444455999999998886655
Q ss_pred HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCC
Q 002275 795 ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHP 874 (944)
Q Consensus 795 ~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 874 (944)
.+.|||++|.|+++++.|.+++|+...++.+++.++..+ ..+|.++|++|+|++++++|+++++.++ ++.++|++|
T Consensus 690 av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~--~~~~~m~~~ 765 (917)
T COG0474 690 AVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED--PESDVMKRP 765 (917)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC--CcccccccC
Confidence 589999999999999999999999988888888887766 5689999999999999999999988874 788999998
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccCc--------chhhhhHHHHHHHHHHHHHhhhe
Q 002275 875 QILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKS--------EMEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 875 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
| .++.+.+++++.++.|++...+++.++++++|..++.... .....++++|+.+++++.++.+.
T Consensus 766 ~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 837 (917)
T COG0474 766 P---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLA 837 (917)
T ss_pred C---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 3788889999999999999999999999888877665432 15678899999999999887653
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-111 Score=929.73 Aligned_cols=793 Identities=21% Similarity=0.257 Sum_probs=596.9
Q ss_pred cccccCCCceeeecc-ccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~-~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~~ 90 (944)
.|++.||.|+++... .+.| +.+++||.+++..++|+.++++++.. ++...+.+.+++++++.+++||||+
T Consensus 31 ~r~~~yG~Nel~~ee~~~~w----k~vLeQF~n~Li~iLL~sA~ISfvl~-----~~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 31 RRRKKYGENELPAEEGESLW----KLVLEQFDNPLILILLLSAAISFVLA-----DFDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHhcCCccCccccCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHH-----hcccceeeeeeeeeeeeeeeeeehh
Confidence 699999999999866 5666 99999999999888888888888754 2333445666777888899999999
Q ss_pred Hhhh---hHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeec
Q 002275 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (944)
Q Consensus 91 ~~~~---~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~ 167 (944)
++|+ ++++.|+.|+|+|+|+.+.+++++|||||||.|+-||+||||.||++..+ +.||||+|||||.|+.|..
T Consensus 102 aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~t 177 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKDT 177 (972)
T ss_pred hHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccccC
Confidence 9886 56677899999999999999999999999999999999999999999887 8999999999999999943
Q ss_pred cccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCcee
Q 002275 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (944)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~ 247 (944)
... | .+++...-++.|++|+||.+..| .+.|+|+.||.+|.+
T Consensus 178 ~~v--------------------~-----------------~~~~~~~~dk~NiaFsGT~V~~G-~a~GIVi~TG~nTei 219 (972)
T KOG0202|consen 178 DAV--------------------P-----------------KDENADVQDKKNIAFSGTLVVAG-RAKGIVIGTGLNTEI 219 (972)
T ss_pred ccc--------------------c-----------------CCCCCccccceeeEeecceeecC-ceeEEEEeccccchH
Confidence 210 0 01111112678999999999999 799999999999999
Q ss_pred eccCC---CCCCccchHHHHHHHHHHHHH-HHHHHHHHHHHh-hcchhcccccccceeeecCCCcchhhhhHhHHHHHHH
Q 002275 248 GMTRG---IPEPKLTAVDAMIDKLTGAIF-VFQIVVVIVLGT-AGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (944)
Q Consensus 248 ~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (944)
|++.+ ..+..++|+|+.+|.+...+. .+.++.+.+..+ ++++. .-.+...|+ ..+..+|.++++ +
T Consensus 220 G~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~-~p~~~g~~f------k~~~~~f~IaVs---L 289 (972)
T KOG0202|consen 220 GKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL-DPVHGGSWF------KGALYYFKIAVS---L 289 (972)
T ss_pred HHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-cccccccch------hchhhhhhHHHH---H
Confidence 98654 345567999999999887776 332222222222 22111 000000111 233455665555 7
Q ss_pred hccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEe
Q 002275 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (944)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (944)
.+.+||+|||+.++....++.+ +|.+++ +.+|++.++|+||.+++||+|||||||+|+|.+.++++.+..
T Consensus 290 AVAAIPEGLPaVvT~tLALG~~------rMakkn----aIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~ 359 (972)
T KOG0202|consen 290 AVAAIPEGLPAVVTTTLALGTR------RMAKKN----AIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGG 359 (972)
T ss_pred HHHhccCCCcchhhhhHHHhHH------HHHhhh----hhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccc
Confidence 7889999999766555555554 677666 679999999999999999999999999999999999998765
Q ss_pred ecCC-----CCCCC-------CchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCC
Q 002275 403 YGNE-----TGDAL-------KDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470 (944)
Q Consensus 403 ~~~~-----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g 470 (944)
+... .+..+ .+...........+.+.++....++||.+....++. ..+...|.|+|.||..++.+.|
T Consensus 360 ~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~ 438 (972)
T KOG0202|consen 360 TATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMG 438 (972)
T ss_pred cccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcC
Confidence 5443 11111 111000011224566889999999999988776554 3333468999999999999998
Q ss_pred eEEEeecCc-EEEE-EECC-eEEEEEEEEeecCCCCCCeeEEEEEecCC-CcEEEEecCchhhccccccc----------
Q 002275 471 MVLVNKNAS-ILEI-KFNG-SVLQYEILETLEFTSDRKRMSVVVKDCHS-GNISLLSKGADEAILPYAHA---------- 536 (944)
Q Consensus 471 ~~~~~~~~~-~~~~-~~~~-~~~~~~~l~~~~f~s~~k~~sviv~~~~~-~~~~l~~KGa~e~i~~~~~~---------- 536 (944)
+.-...... ...- ..+. ....++...++||+++||+|+|.+.++.+ .++.+|+|||+|.|+++|+.
T Consensus 439 l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~ 518 (972)
T KOG0202|consen 439 LPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKV 518 (972)
T ss_pred CCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceee
Confidence 754221110 0000 0000 12345677999999999999999998754 35899999999999999952
Q ss_pred ---CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHH--HHHHHhccceEeeEeccc
Q 002275 537 ---GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE--VCQRLEHDLKVLGVTAIE 611 (944)
Q Consensus 537 ---~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~e~~l~~lG~i~~~ 611 (944)
+..++.+.+...+|+.+|+||+++|+++.+..- ..++.+.+ -+..+|+||+|+|++|+.
T Consensus 519 pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~----------------~~~~~l~~~s~~~~~E~~LtFvGlVGi~ 582 (972)
T KOG0202|consen 519 PLTQASRETILANVYEMGSEGLRVLALASKDSPGQV----------------PDDQDLNDTSNRATAESDLTFVGLVGIL 582 (972)
T ss_pred eCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC----------------hhhhhhcccccccccccceEEEEEeecc
Confidence 123467889999999999999999999766310 00011111 235678999999999999
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
||+|++++++|+.|+++||+|.|+|||+..||.++|+++|+...+.+-.--
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~----------------------------- 633 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSM----------------------------- 633 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccc-----------------------------
Confidence 999999999999999999999999999999999999999987665421111
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
+.+|.+++.+.+...+. ......+|+|++|.+|.++|+.||+.|+.|+|+|||+||+|+||.||+|||| |
T Consensus 634 ----~~TG~efD~ls~~~~~~-----~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM-G 703 (972)
T KOG0202|consen 634 ----ALTGSEFDDLSDEELDD-----AVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM-G 703 (972)
T ss_pred ----ccchhhhhcCCHHHHHH-----HhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee-c
Confidence 23444433332221111 1244789999999999999999999999999999999999999999999999 7
Q ss_pred -cchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccc-cchhhhHHHHhh
Q 002275 772 -REGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGT-SLFNSVSLMAYN 848 (944)
Q Consensus 772 -n~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~ 848 (944)
++.+.+|++||+|+.||+|..++ .+.|||.+|+|++.++.|.+..|+.-....++-. ..|. .+++++|+||+|
T Consensus 704 ~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~a----a~~~p~pL~pvQiLWiN 779 (972)
T KOG0202|consen 704 ISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTA----AFGIPEPLIPVQILWIN 779 (972)
T ss_pred CCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH----HhCCCCcccchhhheee
Confidence 55555666999999999998888 4789999999999999999887775433333322 2233 458999999999
Q ss_pred hhhhhhhHhhhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccCcc--h------
Q 002275 849 VFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE--M------ 920 (944)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------ 920 (944)
+++|.+|+-++.++ |+++++|++||+ ..++.+++++.++.++..++|.++...+.+..-+.+..+. .
T Consensus 780 lvtDG~PA~aLG~e--p~D~DiM~kpPR---~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~ 854 (972)
T KOG0202|consen 780 LVTDGPPATALGFE--PVDPDIMKKPPR---DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHY 854 (972)
T ss_pred eeccCCchhhcCCC--CCChhHHhCCCC---CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcch
Confidence 99999999999998 799999999995 8889999999999998888888877665555444321110 0
Q ss_pred -----------------hhhhHHHHHHHHHHHHHhhh
Q 002275 921 -----------------EEVSMVALSGCIWLQAFVVA 940 (944)
Q Consensus 921 -----------------~~~~~~~f~~~~~~~~~~~~ 940 (944)
.-..|++|+.+++...||-+
T Consensus 855 ~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL 891 (972)
T KOG0202|consen 855 NSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNAL 891 (972)
T ss_pred hhhcccccccchhhhcccccceEEEeehhHHHHHHHh
Confidence 12237888888888888765
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-111 Score=920.60 Aligned_cols=767 Identities=22% Similarity=0.324 Sum_probs=586.8
Q ss_pred cccccCCCceeeeccc-cccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhh-------hHHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGP-------LIFIFAVSATK 83 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------l~~i~~i~~~~ 83 (944)
.|++.||+|.++.++. ++| .++|+.|.+..-++++++|++++...+........|+. ++++++++++.
T Consensus 127 ~Rr~~fG~N~~p~k~~K~Fl----~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 127 RRRKIFGSNTYPEKPPKGFL----RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHhcCCCCCCCCCCccHH----HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 6899999999999885 566 78999999999888888999988876654333334422 12222234443
Q ss_pred HHHHHHHHhhhhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCce
Q 002275 84 EAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLK 163 (944)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~ 163 (944)
++-++.+-++..++..+.++.|+|||+.++|+..||+||||+.|+.||.+||||+++++++ +.+|||++||||+++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~v 278 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDHV 278 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcce
Confidence 3333333333344445678999999999999999999999999999999999999998877 999999999999999
Q ss_pred eeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecC
Q 002275 164 TRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGN 243 (944)
Q Consensus 164 ~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~ 243 (944)
.|.+ ..+-++++||++.+| .+.++|+.+|.
T Consensus 279 ~k~~-------------------------------------------------~~dPfLlSGTkv~eG-sgkMlVTaVGm 308 (1034)
T KOG0204|consen 279 QKSL-------------------------------------------------DKDPFLLSGTKVMEG-SGKMLVTAVGM 308 (1034)
T ss_pred eccC-------------------------------------------------CCCCeEeecceeecC-cceEEEEEeee
Confidence 9932 344589999999999 79999999999
Q ss_pred CceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hcc-c--ccccceeeecCCCcchhhhhHh
Q 002275 244 ETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV--WKD-T--EARKQWYVLYPQEFPWYELLVI 315 (944)
Q Consensus 244 ~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 315 (944)
+|.+|++.. .....++|+|-++++++..+..+.++++++.+++... +.. . .....|-........+..+|.+
T Consensus 309 nt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i 388 (1034)
T KOG0204|consen 309 NTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFII 388 (1034)
T ss_pred cchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhh
Confidence 999998654 2334679999999998877766665555444433211 111 0 0000010000000111222222
Q ss_pred HHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEE
Q 002275 316 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395 (944)
Q Consensus 316 ~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 395 (944)
+++ +++.++|+|||.++.++.....+ +|.+++ .++|.+++||+||..++||+|||||||+|+|+|.+
T Consensus 389 ~VT---ilVVAVPEGLPLAVTLsLAys~k------kMmkD~----~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~ 455 (1034)
T KOG0204|consen 389 AVT---ILVVAVPEGLPLAVTLSLAYSMK------KMMKDN----NLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQ 455 (1034)
T ss_pred eeE---EEEEECCCCccHHHHHHHHHHHH------HHhcch----hHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEe
Confidence 222 68889999998666665555555 455554 46999999999999999999999999999999999
Q ss_pred EEEcCEeecCCCCCCCCchhhhhhhcCCChhHHH-HHHHhhhcceecccccCC-CceeeecCCccHHHHHHHHHhCCeEE
Q 002275 396 CCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR-FLTVMAVCNTVIPAKSKA-GAILYKAQSQDEEALVHAAAQLHMVL 473 (944)
Q Consensus 396 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~~~~~~-~~~~~~~~~p~e~all~~a~~~g~~~ 473 (944)
.|+++..|..+..+. ..-++.+.+ ++.+++...+.....++. |......|+|+|.||+.++..+|.++
T Consensus 456 ~~~~~~~~k~~~~~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~ 525 (1034)
T KOG0204|consen 456 SYIGSEHYKVNSPKS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDF 525 (1034)
T ss_pred eeeccccccccCccc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcch
Confidence 999988776433221 112344444 344444444444333333 33445679999999999999999865
Q ss_pred EeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhccccccc------------CCchh
Q 002275 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA------------GQQTR 541 (944)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~------------~~~~~ 541 (944)
+..+.+.++.+.+||+|+||+|+++++.++++.| +|+|||+|.++..|.. ++...
T Consensus 526 ------------~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~ 592 (1034)
T KOG0204|consen 526 ------------QDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK 592 (1034)
T ss_pred ------------HhhcchhheeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHH
Confidence 3345667889999999999999999998765555 9999999999999972 12335
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHH--HHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChH
Q 002275 542 TFVEAVEQYSQLGLRTLCLAWREVEED--EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVP 619 (944)
Q Consensus 542 ~~~~~~~~~~~~G~rvl~~A~k~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~ 619 (944)
.+++.++.|+.+|+|++|+|||+.... +...|.+ .+..+.+++++|++|++||+||+++
T Consensus 593 ~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRPgV~ 653 (1034)
T KOG0204|consen 593 SFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRPGVP 653 (1034)
T ss_pred HHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCCCcH
Confidence 678899999999999999999995443 1111111 0245689999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcc
Q 002275 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (944)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~ 699 (944)
+||+.|+++||.|.|+|||+..||+++|.+|||+.++.. ...++|..+.+..
T Consensus 654 ~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s-------------------------- 705 (1034)
T KOG0204|consen 654 EAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFRELS-------------------------- 705 (1034)
T ss_pred HHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhhhcC--------------------------
Confidence 999999999999999999999999999999999998765 4555555443321
Q ss_pred hhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhh
Q 002275 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (944)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~ 779 (944)
++.+ .....+..+.+|.+|.+|..+|+.|++.|+.|++.|||.||.|+|++||||.|| |-+++++++
T Consensus 706 -------~ee~-----~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAM-GIaGTeVAK 772 (1034)
T KOG0204|consen 706 -------QEER-----DKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAM-GIAGTEVAK 772 (1034)
T ss_pred -------HHHH-----HhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhc-cccchhhhh
Confidence 1111 112345689999999999999999999999999999999999999999999999 877776655
Q ss_pred -hCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHh
Q 002275 780 -AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL 857 (944)
Q Consensus 780 -~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 857 (944)
+||+|++|++|.++. .+.+||+.|.+++++++|++.-|+...++.|.-+. .+|.+++.++||||+|++||++.++
T Consensus 773 EaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~---~~~dsPLtAVQlLWVNLIMDTLgAL 849 (1034)
T KOG0204|consen 773 EASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSAC---ATGDSPLTAVQLLWVNLIMDTLGAL 849 (1034)
T ss_pred hhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhh---hcCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999998777 57999999999999999999888765444443332 3567889999999999999999999
Q ss_pred hhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhccc------CcchhhhhHHHHHHH
Q 002275 858 VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE------KSEMEEVSMVALSGC 931 (944)
Q Consensus 858 ~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~f~~~ 931 (944)
++++| ||.+++|++|| ++|+..+++..||.+++++++||-++++.+.|.....- ++...+..|+.|+++
T Consensus 850 ALATe--pPt~~Lm~RkP---~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtF 924 (1034)
T KOG0204|consen 850 ALATE--PPTDELMKRKP---VGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTF 924 (1034)
T ss_pred HhccC--CCChHHhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHH
Confidence 99998 57777999988 59999999999999999999999999999988664321 122446679999999
Q ss_pred HHHHHHhhh
Q 002275 932 IWLQAFVVA 940 (944)
Q Consensus 932 ~~~~~~~~~ 940 (944)
+|+|+||-.
T Consensus 925 V~~qvFNEi 933 (1034)
T KOG0204|consen 925 VFCQVFNEI 933 (1034)
T ss_pred HHHHHHHHH
Confidence 999999853
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-107 Score=990.68 Aligned_cols=797 Identities=20% Similarity=0.241 Sum_probs=600.0
Q ss_pred ccccccCCCceeeeccc-cccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~ 89 (944)
++|+++||+|+++.++. ++| +.+++||++|++++++++++++++.. .+...+.+++++++++++.++|++
T Consensus 33 ~~rl~~~G~N~l~~~~~~s~~----~~~l~q~~~~~~~iL~~aails~~~~-----~~~~~~iIl~vv~in~~i~~~QE~ 103 (1053)
T TIGR01523 33 QHRLKEVGENRLEADSGIDAK----AMLLHQVCNAMCMVLIIAAAISFAMH-----DWIEGGVISAIIALNILIGFIQEY 103 (1053)
T ss_pred HHHHHHcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHh-----hHHHHHHHHhHHHHHHHHHHHHHH
Confidence 36999999999999875 566 89999999999988888888887642 223345566777789999999999
Q ss_pred HHhhh---hHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeee
Q 002275 90 NRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (944)
Q Consensus 90 ~~~~~---~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~ 166 (944)
+++++ ++++.+.+++|+|||++++|+++||||||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 104 ~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~ 179 (1053)
T TIGR01523 104 KAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKD 179 (1053)
T ss_pred HHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceecc
Confidence 98886 45567789999999999999999999999999999999999999998766 999999999999999996
Q ss_pred ccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccc-cCcCceeeecceeecCceEEEEEEEecCCc
Q 002275 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCP-LTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (944)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~-~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T 245 (944)
+.... . .....+ .+..|++|+||.+.+| .+.|+|++||.+|
T Consensus 180 ~~~~~------------------~-------------------~~~~~~~~d~~n~lf~GT~V~~G-~g~~vVvatG~~T 221 (1053)
T TIGR01523 180 AHATF------------------G-------------------KEEDTPIGDRINLAFSSSAVTKG-RAKGICIATALNS 221 (1053)
T ss_pred ccccc------------------c-------------------ccccCCcccCCCccccCceEEee-eEEEEEEEecCcc
Confidence 42100 0 000011 2567899999999999 6999999999999
Q ss_pred eeeccCCCC---C-----C------------------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002275 246 KLGMTRGIP---E-----P------------------------------KLTAVDAMIDKLTGAIFVFQIVVVIVLGTAG 287 (944)
Q Consensus 246 ~~~~~~~~~---~-----~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 287 (944)
.+|++.... + + .++|+++.+++++..++.++++++++.+++.
T Consensus 222 ~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~ 301 (1053)
T TIGR01523 222 EIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAH 301 (1053)
T ss_pred HHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875411 0 0 1389999999999988777776666555432
Q ss_pred chhcccccccceeeecCCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCccccccc
Q 002275 288 NVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTA 367 (944)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 367 (944)
.. . .+...+.+++ .+++.++|++||+.++++..++++ +|.+++ +++|+++
T Consensus 302 ~~---------------~--~~~~~~~~av---~l~Va~VPegLp~~vti~La~g~~------rMak~~----~lVr~L~ 351 (1053)
T TIGR01523 302 KF---------------D--VDKEVAIYAI---CLAISIIPESLIAVLSITMAMGAA------NMSKRN----VIVRKLD 351 (1053)
T ss_pred hh---------------h--hhHHHHHHHH---HHHHHHcccchHHHHHHHHHHHHH------HHHhcC----CEeccch
Confidence 10 0 1123333333 367789999999888777777766 566554 7899999
Q ss_pred ccccccceEEEEecCcCcccccceEEEEEEEcCE-eecCCC-CCCCC-----------------------chhhhhh---
Q 002275 368 ISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI-FYGNET-GDALK-----------------------DVGLLNA--- 419 (944)
Q Consensus 368 ~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~-~~~~~~-~~~~~-----------------------~~~~~~~--- 419 (944)
++|+||++++||+|||||||+|+|+|++++.++. .+.... +..+. +.+....
T Consensus 352 avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1053)
T TIGR01523 352 ALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKD 431 (1053)
T ss_pred hhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999998642 221100 00000 0000000
Q ss_pred -hc-----C--CChhHHHHHHHhhhcceecccccC-CCceeeecCCccHHHHHHHHHhCCeEEE---e------ecC---
Q 002275 420 -IT-----S--GSPDVIRFLTVMAVCNTVIPAKSK-AGAILYKAQSQDEEALVHAAAQLHMVLV---N------KNA--- 478 (944)
Q Consensus 420 -~~-----~--~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~~~~~p~e~all~~a~~~g~~~~---~------~~~--- 478 (944)
.. . .++...+++.+.++||++....++ ++. +...|||+|.||++++.+.|+... . ...
T Consensus 432 ~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~-~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~ 510 (1053)
T TIGR01523 432 ELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDC-WKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQ 510 (1053)
T ss_pred cccccccccccccHHHHHHHHHHHhccCCeeeccCCCCc-eeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccc
Confidence 00 0 113456788999999987764322 222 123589999999999998886321 0 000
Q ss_pred cEEEE-EECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC-------------CchhHHH
Q 002275 479 SILEI-KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-------------QQTRTFV 544 (944)
Q Consensus 479 ~~~~~-~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~-------------~~~~~~~ 544 (944)
..... ...+....|++++.+||+|+||||++++++.+++.+++|+|||||.|+++|... ..++++.
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~ 590 (1053)
T TIGR01523 511 SSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELII 590 (1053)
T ss_pred cccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHH
Confidence 00000 001123468899999999999999999997544458899999999999999631 0135577
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHH
Q 002275 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (944)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~ 624 (944)
+.+++|+.+|+||+++|||.++.++...+ .+.. ... .++.+|+||+|+|+++++||+|++++++|++
T Consensus 591 ~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~~--------~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~ 657 (1053)
T TIGR01523 591 ANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ETL--------NRATAESDLEFLGLIGIYDPPRNESAGAVEK 657 (1053)
T ss_pred HHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---ccc--------chhhhccCCEEEEEEeeecCCchhHHHHHHH
Confidence 88999999999999999999986543211 0000 000 1135789999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHH
Q 002275 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (944)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~ 704 (944)
|+++||++||+|||+..+|.++|+++||...+.. ... .......+++|..++.
T Consensus 658 l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~----~~~-----------------------~~~~~~~vitG~~l~~ 710 (1053)
T TIGR01523 658 CHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI----HDR-----------------------DEIMDSMVMTGSQFDA 710 (1053)
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc----ccc-----------------------cccccceeeehHHhhh
Confidence 9999999999999999999999999999754210 000 0001124677877765
Q ss_pred HHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc-cchHHHhhhCcE
Q 002275 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADY 783 (944)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~k~~Ad~ 783 (944)
..+...+.. .....+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||||||| | ++.+.++++||+
T Consensus 711 l~~~~l~~~-----~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm-g~~gt~vak~aADi 784 (1053)
T TIGR01523 711 LSDEEVDDL-----KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDASDI 784 (1053)
T ss_pred cCHHHHHHH-----hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec-CCCccHHHHHhcCE
Confidence 543322211 233579999999999999999999999999999999999999999999999 7 555556779999
Q ss_pred eeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhcccccc--chhhhHHHHhhhhhhhhhHhhhh
Q 002275 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTS--LFNSVSLMAYNVFYTSIPVLVST 860 (944)
Q Consensus 784 v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~~~~~~~~~~~ 860 (944)
++.++++.... .+.+||++|+|+++++.|.+++|+...++.+++.++..++|.+ +++++|++|+|++++.+|+++++
T Consensus 785 vl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~ 864 (1053)
T TIGR01523 785 VLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLG 864 (1053)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhc
Confidence 99987775444 4799999999999999999999998888888888877666754 58899999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcc---c---C----------cchhhhh
Q 002275 861 IDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY---E---K----------SEMEEVS 924 (944)
Q Consensus 861 ~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~----------~~~~~~~ 924 (944)
+| ++++++|++||+ .+...++++.++..+++.+++.+++.+...+..++. . . .+..+.+
T Consensus 865 ~e--~~~~~~m~~~Pr---~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 939 (1053)
T TIGR01523 865 LE--KAAPDLMDRLPH---DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKAR 939 (1053)
T ss_pred cC--CCChhHHhcCCC---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhH
Confidence 87 699999999995 667789999998888888888877665544432211 0 0 1234578
Q ss_pred HHHHHHHHHHHHHhhh
Q 002275 925 MVALSGCIWLQAFVVA 940 (944)
Q Consensus 925 ~~~f~~~~~~~~~~~~ 940 (944)
|++|++++++|+++.+
T Consensus 940 t~~f~~l~~~~~~~~~ 955 (1053)
T TIGR01523 940 SAAFATMTFCALILAV 955 (1053)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999864
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-104 Score=971.97 Aligned_cols=797 Identities=19% Similarity=0.228 Sum_probs=598.0
Q ss_pred ccccccCCCceeeecccc-ccccchHHHHHHHhhHHHHHHHHHHHHhhcccccc--------cccccchhhhHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--------VNPASTWGPLIFIFAVSA 81 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~-~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~l~~i~~i~~ 81 (944)
++|+++||+|+++.++.+ +| +.|++||++|++++++++++++++..... ...+...+++++++++++
T Consensus 43 ~~rl~~~G~N~l~~~~~~~~~----~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 43 AEILARDGPNALTPPPTTPEW----VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHhCCCCCCCCCCCCHH----HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 479999999999887654 55 88999999999988888888866532110 011222345667777899
Q ss_pred HHHHHHHHHHhhhhHHh---cceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccC
Q 002275 82 TKEAWDDYNRYLSDKKA---NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (944)
Q Consensus 82 ~~~~~~~~~~~~~~~~~---~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtG 158 (944)
++++++++++++.++++ .+.+++|+|||++++|+++||||||+|.|++||+|||||+++++++ +.||||+|||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTG 194 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTG 194 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCC
Confidence 99999999998876655 4679999999999999999999999999999999999999996554 8999999999
Q ss_pred CCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEE
Q 002275 159 ETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (944)
Q Consensus 159 Es~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V 238 (944)
||.|+.|.+.. ....+++..|++|+||.+.+| .+.++|
T Consensus 195 ES~pv~K~~~~-----------------------------------------~~~~~~~~~n~l~~Gt~v~~G-~~~~~V 232 (997)
T TIGR01106 195 ESEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TARGIV 232 (997)
T ss_pred CCCceeccCCC-----------------------------------------cccCccccCCeEEeccEeeee-eEEEEE
Confidence 99999995421 111244678999999999998 799999
Q ss_pred EEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHh
Q 002275 239 VYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVI 315 (944)
Q Consensus 239 ~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (944)
++||.+|++|++.+ ..+.+++|+++.+++++..+..++++++++.++++... ...|...+.+
T Consensus 233 ~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 297 (997)
T TIGR01106 233 VNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------------GYTWLEAVIF 297 (997)
T ss_pred EEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHHHHHHH
Confidence 99999999999766 34556799999999999887777666665555443211 1133444443
Q ss_pred HHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEE
Q 002275 316 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395 (944)
Q Consensus 316 ~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 395 (944)
+++ +++.++|++|++++.++...++. +|.+. ++++|+++++|+||++++||||||||||+|+|+|++
T Consensus 298 ~i~---v~v~~iP~~L~~~v~i~l~~~~~------~m~~~----~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~ 364 (997)
T TIGR01106 298 LIG---IIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH 364 (997)
T ss_pred HHH---HHhhcCCccchHHHHHHHHHHHH------HHHHC----CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEE
Confidence 333 56667999999988888777765 44433 488999999999999999999999999999999999
Q ss_pred EEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCc---eeeecCCccHHHHHHHHHhCCeE
Q 002275 396 CCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMV 472 (944)
Q Consensus 396 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~---~~~~~~~p~e~all~~a~~~g~~ 472 (944)
+++++..|..+......... .....+....++.++++||++.+..+.++. -.+..+||+|.|+++++...+..
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~ 440 (997)
T TIGR01106 365 MWFDNQIHEADTTEDQSGVS----FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGS 440 (997)
T ss_pred EEECCeEEecCCccCCCCcc----CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCC
Confidence 99988766432211100000 011123445788899999987764332211 12346899999999999864321
Q ss_pred EEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEec--CCCcEEEEecCchhhccccccc----C-------Cc
Q 002275 473 LVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----G-------QQ 539 (944)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~--~~~~~~l~~KGa~e~i~~~~~~----~-------~~ 539 (944)
. .+.+..++.++.+||+|+||||+++++.. +++++++|+|||||.|+++|+. + +.
T Consensus 441 ~------------~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~ 508 (997)
T TIGR01106 441 V------------MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEEL 508 (997)
T ss_pred H------------HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHH
Confidence 1 11234577889999999999999988642 2346889999999999999962 1 12
Q ss_pred hhHHHHHHHHHHhccceEEEEEEEecCHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCCh
Q 002275 540 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE-WSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618 (944)
Q Consensus 540 ~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~ 618 (944)
++.+.+.+++++.+|+||+++|||.++.+++.+ |.. +.+ ..+..|+||+|+|+++++||+|+++
T Consensus 509 ~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v 573 (997)
T TIGR01106 509 KEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAV 573 (997)
T ss_pred HHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc----------cch-----hhhccccCcEEEEEEeccCCChHHH
Confidence 345778899999999999999999987654321 100 000 0123478999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEc
Q 002275 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698 (944)
Q Consensus 619 ~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 698 (944)
+++|++|+++||+++|+|||+..+|.++|+++|++.++... .++....+....+ ..........+++
T Consensus 574 ~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~---------~~~i~~~~~~~~~----~~~~~~~~~~vi~ 640 (997)
T TIGR01106 574 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET---------VEDIAARLNIPVS----QVNPRDAKACVVH 640 (997)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccc---------hhhhhhhcccccc----ccccccccceEEE
Confidence 99999999999999999999999999999999998664320 0111111000000 0011122246889
Q ss_pred chhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHH-H
Q 002275 699 GWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ-A 777 (944)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~-~ 777 (944)
|..++...++. +.++.......+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||||||| |+.+.+ +
T Consensus 641 G~~l~~l~~~e---l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam-g~~G~~va 716 (997)
T TIGR01106 641 GSDLKDMTSEQ---LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVS 716 (997)
T ss_pred hHHhhhCCHHH---HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec-CCcccHHH
Confidence 98887654432 222222223469999999999999999999999999999999999999999999999 765444 5
Q ss_pred hhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhH
Q 002275 778 ARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPV 856 (944)
Q Consensus 778 k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 856 (944)
+++||+|+.++++.... .+.|||++|.|+++.+.|.++.|+...++.+++.++.. ..+++++|++|+|+++|.+|+
T Consensus 717 k~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qlL~inli~d~lp~ 793 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI---PLPLGTITILCIDLGTDMVPA 793 (997)
T ss_pred HHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---cchhHHHHHHHHHHHHHHHHH
Confidence 66999999998775555 47999999999999999999999988777777766533 346899999999999999999
Q ss_pred hhhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHH-HHHHHHHHHHhhhhhhhcc---------cC---------
Q 002275 857 LVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYAY---------EK--------- 917 (944)
Q Consensus 857 ~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~--------- 917 (944)
+++++| ++++++|++||+ ..+.+.++++.+++.+++ .+++++++.++..+..+++ ..
T Consensus 794 ~al~~e--~~~~~~m~~~P~--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 869 (997)
T TIGR01106 794 ISLAYE--KAESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWI 869 (997)
T ss_pred HHHhcC--CCCcccccCCCc--CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccc
Confidence 999997 688999998885 234678999988877654 5778887766655433210 00
Q ss_pred ------cc-----------hhhhhHHHHHHHHHHHHHhhh
Q 002275 918 ------SE-----------MEEVSMVALSGCIWLQAFVVA 940 (944)
Q Consensus 918 ------~~-----------~~~~~~~~f~~~~~~~~~~~~ 940 (944)
.+ ....+|++|++++++|+|+++
T Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~ 909 (997)
T TIGR01106 870 NDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLI 909 (997)
T ss_pred cccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHH
Confidence 00 014689999999999999986
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-103 Score=962.91 Aligned_cols=761 Identities=21% Similarity=0.292 Sum_probs=572.3
Q ss_pred ccccccCCCceeeeccc-cccccchHHHHHHHhhHHHHHHHHHHHHhhccccc-----ccccccchh---hhHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT-----PVNPASTWG---PLIFIFAVSA 81 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~---~l~~i~~i~~ 81 (944)
++|+++||+|+++.++. ++| +.+++||+++++++++++++++++.... +.++...|. .+++++++..
T Consensus 67 ~~r~~~yG~N~l~~~~~~s~~----~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~ 142 (941)
T TIGR01517 67 ERREKVYGKNELPEKPPKSFL----QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVV 142 (941)
T ss_pred HHHHHHhCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHh
Confidence 47999999999999876 455 8899999999999988888888874321 122222332 2233344455
Q ss_pred HHHHHHHHHHhhhhHH----hcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEecccc
Q 002275 82 TKEAWDDYNRYLSDKK----ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (944)
Q Consensus 82 ~~~~~~~~~~~~~~~~----~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~Lt 157 (944)
++.+++++++.++.++ .++.+++|+|||++++|+++||||||||.|++||+|||||+|++++ .+.||||+||
T Consensus 143 ~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~LT 218 (941)
T TIGR01517 143 LVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSIT 218 (941)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecccC
Confidence 6667777776654333 3467899999999999999999999999999999999999999543 4999999999
Q ss_pred CCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEE
Q 002275 158 GETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGV 237 (944)
Q Consensus 158 GEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~ 237 (944)
|||.|+.|.+ ...|++|+||.+.+| .+.++
T Consensus 219 GES~pv~K~~-------------------------------------------------~~~n~v~~GT~v~~G-~~~~i 248 (941)
T TIGR01517 219 GESDPIKKGA-------------------------------------------------PKDSFLLSGTVVNEG-SGRML 248 (941)
T ss_pred CCCCcccccC-------------------------------------------------CCCceEEeCCeEEee-EEEEE
Confidence 9999999943 235789999999999 79999
Q ss_pred EEEecCCceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hcccccccceeeecCCCcchhhh
Q 002275 238 AVYTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV---WKDTEARKQWYVLYPQEFPWYEL 312 (944)
Q Consensus 238 V~~tG~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 312 (944)
|++||.+|.+|++... ...+++|+++.++++...+..+.++++++.++++.. +........ . .......+...
T Consensus 249 V~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 326 (941)
T TIGR01517 249 VTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR-D-TEEDAQTFLDH 326 (941)
T ss_pred EEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-c-cchhhHHHHHH
Confidence 9999999999986442 122457999999999888776666555544443321 110000000 0 00000123333
Q ss_pred hHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceE
Q 002275 313 LVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 392 (944)
Q Consensus 313 ~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~ 392 (944)
+. .++.+++.++|++||+.++++...... +|.+++ +++|+++++|+||++++||||||||||+|+|+
T Consensus 327 ~~---~al~llv~~iP~~Lp~~vti~l~~~~~------~mak~~----ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~ 393 (941)
T TIGR01517 327 FI---IAVTIVVVAVPEGLPLAVTIALAYSMK------KMMKDN----NLVRHLAACETMGSATAICSDKTGTLTQNVMS 393 (941)
T ss_pred HH---HHHHHHHhhCCCchHHHHHHHHHHHHH------HHHhCC----CEEechHHhhhccCceEEEEcCcCceeeceEE
Confidence 33 334477888999998766666555544 555443 78999999999999999999999999999999
Q ss_pred EEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeE
Q 002275 393 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMV 472 (944)
Q Consensus 393 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~ 472 (944)
+++++..+..+..++. .. ..++...+++...+.||+..+...++....+..+||+|.|+++++++.|..
T Consensus 394 v~~~~~~~~~~~~~~~--------~~---~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~ 462 (941)
T TIGR01517 394 VVQGYIGEQRFNVRDV--------LR---NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRD 462 (941)
T ss_pred EEEEEEecceEecCcc--------cc---cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCC
Confidence 9999876544432110 00 011234455556666666544322111223456899999999999876642
Q ss_pred EEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC-----C------chh
Q 002275 473 LVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----Q------QTR 541 (944)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~-----~------~~~ 541 (944)
.. .....+++++.+||++++|||+++++.. ++++++++|||||.|++.|... . ..+
T Consensus 463 ~~------------~~~~~~~~~~~~pF~s~~k~msvv~~~~-~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~ 529 (941)
T TIGR01517 463 YQ------------EVRAEEKVVKIYPFNSERKFMSVVVKHS-GGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKD 529 (941)
T ss_pred HH------------HHHhhchhccccccCCCCCeEEEEEEeC-CCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHH
Confidence 10 0123456788999999999999999974 4568999999999999999631 1 134
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHH
Q 002275 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (944)
Q Consensus 542 ~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~a 621 (944)
++.+.+++++.+|+||+++|||.++.++..++ +..|+||+|+|+++++||+|++++++
T Consensus 530 ~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~a 587 (941)
T TIGR01517 530 RCADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVREA 587 (941)
T ss_pred HHHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHHH
Confidence 57788899999999999999999875442211 12368999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchh
Q 002275 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (944)
Q Consensus 622 I~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~ 701 (944)
|++|+++||+++|+|||+..+|.++|+++|+..++.. +++|..
T Consensus 588 I~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~-------------------------------------vi~G~~ 630 (941)
T TIGR01517 588 VQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGL-------------------------------------AMEGKE 630 (941)
T ss_pred HHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCce-------------------------------------EeeHHH
Confidence 9999999999999999999999999999999765321 233333
Q ss_pred HHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc-cchHHHhhh
Q 002275 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARA 780 (944)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~k~~ 780 (944)
++...++ .+.+ ...+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||| | ++.+.++++
T Consensus 631 ~~~l~~~---el~~--~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm-g~~gtdvAk~a 704 (941)
T TIGR01517 631 FRRLVYE---EMDP--ILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM-GISGTEVAKEA 704 (941)
T ss_pred hhhCCHH---HHHH--HhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec-CCCccHHHHHh
Confidence 3322111 1111 1234679999999999999999999999999999999999999999999999 7 555556779
Q ss_pred CcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhh
Q 002275 781 ADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVS 859 (944)
Q Consensus 781 Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 859 (944)
||+++.++++.... ++.+||++|.|+++++.|.+++|+...++.++..++.+ ..+++++|++|+|++++.+|++++
T Consensus 705 ADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~~~qil~inl~~d~~~al~l 781 (941)
T TIGR01517 705 SDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLTAVQLLWVNLIMDTLAALAL 781 (941)
T ss_pred CCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHhhHHHH
Confidence 99999987775444 46999999999999999999999987777666555543 457999999999999999999999
Q ss_pred hccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhccc--Cc-------chhhhhHHHHHH
Q 002275 860 TIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE--KS-------EMEEVSMVALSG 930 (944)
Q Consensus 860 ~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~f~~ 930 (944)
++| +|++++|++||+ .++..++++.+|..+++++++++++.+++.+....+. .. .....+|++|++
T Consensus 782 ~~e--~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~ 856 (941)
T TIGR01517 782 ATE--PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNT 856 (941)
T ss_pred ccC--CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHH
Confidence 887 689999999995 5677899999999999999999998877766443211 11 124678999999
Q ss_pred HHHHHHHhhhe
Q 002275 931 CIWLQAFVVAL 941 (944)
Q Consensus 931 ~~~~~~~~~~~ 941 (944)
++++|+|+.+.
T Consensus 857 ~v~~~~~~~~~ 867 (941)
T TIGR01517 857 FVLLQLFNEIN 867 (941)
T ss_pred HHHHHHHHHHH
Confidence 99999999753
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-101 Score=940.60 Aligned_cols=778 Identities=22% Similarity=0.274 Sum_probs=578.7
Q ss_pred HHHHHhhHHHHHHHHHHHHhhccccccc--ccccch---hhhHHHHHHHHHHHHHHHHHHhhhhH---HhcceEEEEEEC
Q 002275 37 LWEQFSRFMNQYFLLIACLQLWSLITPV--NPASTW---GPLIFIFAVSATKEAWDDYNRYLSDK---KANEKEVWVVKQ 108 (944)
Q Consensus 37 l~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~---~~l~~i~~i~~~~~~~~~~~~~~~~~---~~~~~~~~V~r~ 108 (944)
+++||++|++++++++++++++..+.+. .....| +.++++++++++++++++++++++.+ ++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 4789999999999999999987653321 111223 44556677788899999999887644 456789999999
Q ss_pred CeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEe
Q 002275 109 GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188 (944)
Q Consensus 109 g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~ 188 (944)
|++++|+++||||||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.+...
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~------------------ 138 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESV------------------ 138 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCccccccccc------------------
Confidence 999999999999999999999999999999996654 9999999999999999964210
Q ss_pred cCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccCC---CCCCccchHHHHH
Q 002275 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMI 265 (944)
Q Consensus 189 ~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~ 265 (944)
| +.+..+.+.+|++|+||.+.+| ++.++|++||.+|++|++.+ ..+.+++|+++.+
T Consensus 139 --~------------------~~~~~~~~~~n~l~~GT~v~~G-~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l 197 (917)
T TIGR01116 139 --P------------------DERAVNQDKKNMLFSGTLVVAG-KARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKL 197 (917)
T ss_pred --C------------------ccccCcccccceeeeCCEEecc-eEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHH
Confidence 0 0111123567999999999998 79999999999999998543 4556789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHh-HHHHHHHhccccceEEEeeHHHHHHHHHH
Q 002275 266 DKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVI-PLRFELLCSIMIPISIKVSLDLVKSLYAK 344 (944)
Q Consensus 266 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~iP~~l~v~l~~~~~~~~~ 344 (944)
++++..++.+.++++++.++++..+. ........|...+.. +...+.+++.++|++||++++++...+++
T Consensus 198 ~~~~~~l~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~ 268 (917)
T TIGR01116 198 DEFGELLSKVIGLICILVWVINIGHF---------NDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 268 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---------ccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH
Confidence 99998887766665555544332110 000001122221111 11223367889999999999888888876
Q ss_pred hhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCC-----CCCCCCc-hhhhh
Q 002275 345 FIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE-----TGDALKD-VGLLN 418 (944)
Q Consensus 345 ~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~-----~~~~~~~-~~~~~ 418 (944)
+|.++ ++++|+++++|+||++++||||||||||+|+|++++++..+..+... .+..+.. .....
T Consensus 269 ------~m~~~----~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (917)
T TIGR01116 269 ------KMAKK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIK 338 (917)
T ss_pred ------HHHHC----CcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccc
Confidence 44443 37899999999999999999999999999999999998765321000 0000000 00000
Q ss_pred h---h-cCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECC----eEE
Q 002275 419 A---I-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG----SVL 490 (944)
Q Consensus 419 ~---~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~----~~~ 490 (944)
. . ...++...+++.++++||++....++++......+||+|.|+++++.+.|+...............+ ...
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 418 (917)
T TIGR01116 339 DDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWND 418 (917)
T ss_pred cCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHh
Confidence 0 0 0012345678899999999776543322211225899999999999998876543332222221111 134
Q ss_pred EEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhccccccc-----CC-------chhHHHHHHHHHHh-ccceE
Q 002275 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFVEAVEQYSQ-LGLRT 557 (944)
Q Consensus 491 ~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~-----~~-------~~~~~~~~~~~~~~-~G~rv 557 (944)
.|++++.+||+|+||||+++++. ++++.+|+|||||.|+++|+. +. ..+++.+.+++|+. +|+||
T Consensus 419 ~~~~~~~~pF~s~rK~msviv~~--~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRv 496 (917)
T TIGR01116 419 KFKKLATLEFSRDRKSMSVLCKP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRC 496 (917)
T ss_pred hcceeeecccChhhCeEEEEEee--CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeE
Confidence 57889999999999999999986 467899999999999999963 11 13457788999999 99999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcC
Q 002275 558 LCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTG 637 (944)
Q Consensus 558 l~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TG 637 (944)
+++|||.++.++... ...+ ...++.+|+|++|+|+++++||+|++++++|++||++|++++|+||
T Consensus 497 l~~A~k~~~~~~~~~----------~~~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTG 561 (917)
T TIGR01116 497 LALAFKDIPDPREED----------LLSD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITG 561 (917)
T ss_pred EEEEEEECCcccccc----------cccc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecC
Confidence 999999987543110 0000 0122467899999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhh
Q 002275 638 DKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717 (944)
Q Consensus 638 d~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~ 717 (944)
|+..+|.++|+++|+..++...... .++|..++...+... ..
T Consensus 562 D~~~tA~~ia~~~gi~~~~~~v~~~---------------------------------~~~g~~l~~~~~~~~-----~~ 603 (917)
T TIGR01116 562 DNKETAEAICRRIGIFSPDEDVTFK---------------------------------SFTGREFDEMGPAKQ-----RA 603 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCccccce---------------------------------eeeHHHHhhCCHHHH-----HH
Confidence 9999999999999997654320011 223333222111110 11
Q ss_pred hccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-Hh
Q 002275 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-IL 796 (944)
Q Consensus 718 ~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l 796 (944)
...+..+|+|++|+||.++++.+++.|+.|+|+|||.||+|||+.||+|||| |++.+.++++||+++.++++.... ++
T Consensus 604 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 604 ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred hhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 2345679999999999999999999999999999999999999999999999 777677777999999986664433 36
Q ss_pred hhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCcc
Q 002275 797 VHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQI 876 (944)
Q Consensus 797 ~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 876 (944)
.|||++|.|+++.+.|.+++|+...++.+++.++.. ..+|++.|++|+|++++.+|+++++++ ++++++|++||+
T Consensus 683 ~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qll~inli~d~lp~~~l~~~--~~~~~~m~~pP~ 757 (917)
T TIGR01116 683 EEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI---PEGLIPVQLLWVNLVTDGLPATALGFN--PPDKDIMWKPPR 757 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC---CchHHHHHHHHHHHHHHHHHHHHHhcC--CcchhHhcCCCC
Confidence 999999999999999999999988777777665422 257999999999999999999998887 578999999995
Q ss_pred ccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcc-cC--------------c--------chhhhhHHHHHHHHH
Q 002275 877 LFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY-EK--------------S--------EMEEVSMVALSGCIW 933 (944)
Q Consensus 877 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~--------~~~~~~~~~f~~~~~ 933 (944)
.+++.++++++|+.|++.+++++++.++..++.+.. .. . .....+|++|+++++
T Consensus 758 ---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~ 834 (917)
T TIGR01116 758 ---RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVV 834 (917)
T ss_pred ---CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHH
Confidence 678899999999999999999998854443322211 00 0 123567999999999
Q ss_pred HHHHhhh
Q 002275 934 LQAFVVA 940 (944)
Q Consensus 934 ~~~~~~~ 940 (944)
+|+|+.+
T Consensus 835 ~q~~~~~ 841 (917)
T TIGR01116 835 IEMFNAL 841 (917)
T ss_pred HHHHHHH
Confidence 9999875
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-99 Score=923.83 Aligned_cols=746 Identities=20% Similarity=0.271 Sum_probs=570.2
Q ss_pred ccccccCCCceeeeccc-cccccchHHHHHHH-hhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQF-SRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDD 88 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~ 88 (944)
++|+++||+|+++.++. ++| +.+++|| ++|++++++++++++++.. .+ ...+.++++++++.+.+++++
T Consensus 31 ~~r~~~~G~N~i~~~~~~s~~----~~~l~~~~~~~~~~~L~~aa~ls~~~g----~~-~~~~~i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 31 SHRRAFHGWNEFDVEEDESLW----KKFLSQFVKNPLILLLIASAVISVFMG----NI-DDAVSITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHhcCCCcCCCCCCCCHH----HHHHHHHhhChHHHHHHHHHHHHHHHc----ch-hhHHHHHhHHHHHHHHHHHHH
Confidence 46999999999998774 555 8899999 9999888888888877543 22 222334445556777899999
Q ss_pred HHHhhhhH---HhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceee
Q 002275 89 YNRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR 165 (944)
Q Consensus 89 ~~~~~~~~---~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K 165 (944)
++++++.+ ++.+.+++|+|||++++|+++||||||||.|++||+|||||+|+++++ +.||||+|||||.|+.|
T Consensus 102 ~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K 177 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSK 177 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceec
Confidence 98877654 456789999999999999999999999999999999999999996544 89999999999999999
Q ss_pred eccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCc
Q 002275 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (944)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T 245 (944)
.+.+... +......+.+|++|+||.+.+| .+.++|++||.+|
T Consensus 178 ~~~~~~~-------------------------------------~~~~~~~~~~n~v~~GT~v~~G-~~~~~V~~tG~~T 219 (884)
T TIGR01522 178 VTAPIPA-------------------------------------ATNGDLAERSNIAFMGTLVRCG-HGKGIVVGTGSNT 219 (884)
T ss_pred ccccccc-------------------------------------cccccccccCceEEeCCEEEee-eEEEEEEEecCcc
Confidence 6532100 0001112567899999999998 7999999999999
Q ss_pred eeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHH
Q 002275 246 KLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (944)
Q Consensus 246 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (944)
.+|++.+ ..+..++|+++.+++++.++.++.++++++.+++++. .+..+...+..+++ +
T Consensus 220 ~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~v~---l 281 (884)
T TIGR01522 220 EFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF---------------QGKDWLEMFTISVS---L 281 (884)
T ss_pred HHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hcCCHHHHHHHHHH---H
Confidence 9998754 3455679999999999988776655444443333211 11234455554443 6
Q ss_pred hccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEe
Q 002275 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (944)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (944)
++.++|++||+++.++...... +|.++ ++++|+++++|+||++++||||||||||+|+|.|++++..+..
T Consensus 282 lv~aiP~~Lp~~vt~~l~~~~~------r~ak~----~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~ 351 (884)
T TIGR01522 282 AVAAIPEGLPIIVTVTLALGVL------RMSKK----RAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGL 351 (884)
T ss_pred HHHHccchHHHHHHHHHHHHHH------HHhhc----CCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCce
Confidence 7788999998877666666554 45444 3789999999999999999999999999999999999876543
Q ss_pred ecCCCC-------CCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEe
Q 002275 403 YGNETG-------DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN 475 (944)
Q Consensus 403 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~ 475 (944)
+...+. ....+.+... ...++...+++.+.++||++.....+ + ...+||+|.|+++++++.|...
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~-~---~~~g~p~e~All~~~~~~~~~~-- 423 (884)
T TIGR01522 352 HTMLNAVSLNQFGEVIVDGDVLH--GFYTVAVSRILEAGNLCNNAKFRNEA-D---TLLGNPTDVALIELLMKFGLDD-- 423 (884)
T ss_pred EeeccCCccCCCCcccccccccc--cccCHHHHHHHHHHhhhCCCeecCCC-C---CcCCChHHHHHHHHHHHcCcHh--
Confidence 211000 0000000000 11234566788899999987643221 1 1247999999999998876521
Q ss_pred ecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhccccccc-----CC-------chhHH
Q 002275 476 KNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTF 543 (944)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~-----~~-------~~~~~ 543 (944)
....++.++.+||+|+||||+++++...++++++++||+||.|+..|.. +. .++++
T Consensus 424 ------------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i 491 (884)
T TIGR01522 424 ------------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVI 491 (884)
T ss_pred ------------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHH
Confidence 1234677899999999999999998766678899999999999999963 11 12456
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHH
Q 002275 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (944)
Q Consensus 544 ~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~ 623 (944)
.+.+++++.+|+|++++|||.++ .+++|+|+++++||+||+++++|+
T Consensus 492 ~~~~~~~a~~G~rvl~~A~~~~~---------------------------------~~l~~lGli~l~Dp~r~~~~~~i~ 538 (884)
T TIGR01522 492 QEEAAEMASAGLRVIAFASGPEK---------------------------------GQLTFLGLVGINDPPRPGVKEAVT 538 (884)
T ss_pred HHHHHHHHhcCCEEEEEEEEcCC---------------------------------CCeEEEEEEeccCcchhHHHHHHH
Confidence 77888999999999999998652 589999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHH
Q 002275 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (944)
Q Consensus 624 ~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~ 703 (944)
+|+++|++++|+|||+..+|.++|+++|+...... +++|..++
T Consensus 539 ~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------~v~g~~l~ 581 (884)
T TIGR01522 539 TLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------SVSGEKLD 581 (884)
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------eeEhHHhH
Confidence 99999999999999999999999999999765432 12232222
Q ss_pred HHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHh-hhCc
Q 002275 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAAD 782 (944)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k-~~Ad 782 (944)
...+. .+.+ ...+..+|+|++|+||..+++.+|+.|+.|+|+|||.||+|||+.||||||| |.++.+++ ++||
T Consensus 582 ~~~~~---~l~~--~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaD 655 (884)
T TIGR01522 582 AMDDQ---QLSQ--IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAAD 655 (884)
T ss_pred hCCHH---HHHH--HhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcC
Confidence 21111 1111 1235689999999999999999999999999999999999999999999999 75444454 5999
Q ss_pred EeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhc
Q 002275 783 YSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI 861 (944)
Q Consensus 783 ~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 861 (944)
+++.++++.... .+.+||++|+|+++++.|.+..|+...++.+++.++ ....+++++|++|+|++++.+|++++.+
T Consensus 656 ivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~---~~~~pl~~~qiL~inl~~d~~~a~~l~~ 732 (884)
T TIGR01522 656 MILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM---GFPNPLNAMQILWINILMDGPPAQSLGV 732 (884)
T ss_pred EEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH---cCCCchhHHHHHHHHHHHHhhHHHHhcc
Confidence 999987775555 478999999999999999999888755444433332 2235799999999999999999999998
Q ss_pred cCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccCcchhhhhHHHHHHHHHHHHHhhh
Q 002275 862 DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVA 940 (944)
Q Consensus 862 ~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 940 (944)
| ++++++|++||+ .+++.++++.+|..+++++++++++.+++.+..+... ......+|++|++++++|+|+.+
T Consensus 733 e--~~~~~~m~~~P~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~t~~f~~~v~~q~~~~~ 805 (884)
T TIGR01522 733 E--PVDKDVMRKPPR---PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDG-VITARDTTMTFTCFVFFDMFNAL 805 (884)
T ss_pred C--CCChhHhhCCCC---CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-cchhhHHHHHHHHHHHHHHHHHH
Confidence 7 688999999984 6788999999999999999998877665544333221 11235679999999999999975
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-98 Score=925.86 Aligned_cols=797 Identities=19% Similarity=0.229 Sum_probs=575.8
Q ss_pred cccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~~~ 91 (944)
+|+++||+|+++.+++++| +.++++|.+|+++++++.+++++. . +++.+.+.++++++++.+...+++++.
T Consensus 147 ~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~-~----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 147 QRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL-D----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999887776 889999999998666555444332 1 222233444555666777888888888
Q ss_pred hhhhHHhc--ceEEEEEECCeEEEEeeccCccccEEEEe--cCccccccEEEEeccCCCceEEEEeccccCCCCceeeec
Q 002275 92 YLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLR--ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (944)
Q Consensus 92 ~~~~~~~~--~~~~~V~r~g~~~~I~~~~lvvGDII~l~--~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~ 167 (944)
.++++++. +..++|+|||++++|+++||||||||.|+ +|++|||||+|+ +|.|.||||+|||||.|+.|.+
T Consensus 218 ~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll-----~g~~~VdES~LTGES~Pv~K~~ 292 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGESVPVLKFP 292 (1054)
T ss_pred HHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEE-----eCcEEEecccccCCccceeccc
Confidence 77776653 66899999999999999999999999999 999999999999 6779999999999999999975
Q ss_pred cccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeec------CceEEEEEEEe
Q 002275 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN------TEWACGVAVYT 241 (944)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~------g~~~~~~V~~t 241 (944)
...... .+.+. ...+...+|++|+||.+.+ .+.+.|+|++|
T Consensus 293 ~~~~~~-----------------~~~~~----------------~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~T 339 (1054)
T TIGR01657 293 IPDNGD-----------------DDEDL----------------FLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRT 339 (1054)
T ss_pred CCcccc-----------------ccccc----------------cccccccceEEEcCCEEEEEecCCCCCcEEEEEEeC
Confidence 421000 00000 0011256789999999985 13699999999
Q ss_pred cCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHH
Q 002275 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLR 318 (944)
Q Consensus 242 G~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (944)
|.+|..|++.+ ..++..+++++...++...++.++++.+++.++.+ .. .+.++...+ +.
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~--------------~~~~~~~~~---l~ 401 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IK--------------DGRPLGKII---LR 401 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------------cCCcHHHHH---HH
Confidence 99999998765 34455678888888877665554443332222111 00 112333443 44
Q ss_pred HHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEE
Q 002275 319 FELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCI 398 (944)
Q Consensus 319 ~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~ 398 (944)
++.+++.++|++||++++++...+.. +|.+. ++.++++.++|++|+++++|||||||||+|+|.|.+++.
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~------rL~k~----~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~ 471 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLA------RLKKK----GIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQG 471 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHH------HHHHC----CEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEec
Confidence 55688899999999988888777665 45444 388999999999999999999999999999999999986
Q ss_pred cCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecC
Q 002275 399 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478 (944)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~ 478 (944)
.+...... .... .........+..++++||++.... +. ..|||+|.|+++++ ++.+.....
T Consensus 472 ~~~~~~~~--~~~~--------~~~~~~~~~~~~~~a~C~~~~~~~---~~---~~Gdp~E~al~~~~---~~~~~~~~~ 532 (1054)
T TIGR01657 472 LSGNQEFL--KIVT--------EDSSLKPSITHKALATCHSLTKLE---GK---LVGDPLDKKMFEAT---GWTLEEDDE 532 (1054)
T ss_pred ccCccccc--cccc--------cccccCchHHHHHHHhCCeeEEEC---CE---EecCHHHHHHHHhC---CCEEECCCC
Confidence 43211000 0000 001122345677899999986542 22 35999999999976 333322010
Q ss_pred cEE------EEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHHHHHHHHHHh
Q 002275 479 SIL------EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQ 552 (944)
Q Consensus 479 ~~~------~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~ 552 (944)
... .+...+....+++++.+||+|++|||||+++..+++++++|+|||||.|+++|..+..++++.+.+++|+.
T Consensus 533 ~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~ 612 (1054)
T TIGR01657 533 SAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTR 612 (1054)
T ss_pred cccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHh
Confidence 000 00011223578999999999999999999998766778999999999999999977778899999999999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeE
Q 002275 553 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 632 (944)
Q Consensus 553 ~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v 632 (944)
+|+||+++|||++++.+..++.+ ..++++|+||+|+|+++|+||+|++++++|++|+++||++
T Consensus 613 ~G~RVLalA~k~l~~~~~~~~~~-----------------~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v 675 (1054)
T TIGR01657 613 EGYRVLALAYKELPKLTLQKAQD-----------------LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRT 675 (1054)
T ss_pred cCCEEEEEEEeecCccchhhhhh-----------------ccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeE
Confidence 99999999999997433221110 1124678999999999999999999999999999999999
Q ss_pred EEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCC-------------HHHH-----HHHHHHHHHHhhcccCCCCcEE
Q 002275 633 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT-------------EDEV-----CRSLERVLLTMRITTSEPKDVA 694 (944)
Q Consensus 633 ~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 694 (944)
+|+|||+..||.++|+++||+.++.. ++..+-.. .++. ......................
T Consensus 676 ~miTGD~~~TA~~iA~~~gii~~~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1054)
T TIGR01657 676 VMITGDNPLTAVHVARECGIVNPSNT--LILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYH 753 (1054)
T ss_pred EEECCCCHHHHHHHHHHcCCCCCCce--EEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceE
Confidence 99999999999999999999876432 22111000 0000 0000000000000011123456
Q ss_pred EEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccch
Q 002275 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREG 774 (944)
Q Consensus 695 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~ 774 (944)
++++|+.++.+.+...+.+.++ ..+..+|||++|+||.++|+.+|+.|+.|+|+|||.||+||||+||||||| +++
T Consensus 754 ~~itG~~l~~l~~~~~~~l~~~--~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam-~~~- 829 (1054)
T TIGR01657 754 LAMSGKAFAVLQAHSPELLLRL--LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL-SEA- 829 (1054)
T ss_pred EEEEcHHHHHHHHhhHHHHHHH--HhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceee-ccc-
Confidence 8999999887655443444443 244679999999999999999999999999999999999999999999999 544
Q ss_pred HHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhh
Q 002275 775 LQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTS 853 (944)
Q Consensus 775 ~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 853 (944)
+++.+||+++.++++.... ++.+||+++.++.+.++|.+..+++..+... ...+.+ .+++++|++|+|++++.
T Consensus 830 -das~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~----~l~~~~-~~l~~~Q~l~i~li~~~ 903 (1054)
T TIGR01657 830 -EASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVS----ILYLIG-SNLGDGQFLTIDLLLIF 903 (1054)
T ss_pred -cceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHcc-CcCccHHHHHHHHHHHH
Confidence 3668999999987775555 5789999999998887777665554332222 111223 55789999999999999
Q ss_pred hhHhhhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhccc------C------cchh
Q 002275 854 IPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE------K------SEME 921 (944)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------~~~~ 921 (944)
++++++.++ +|++++|++|| ...++++.++..++++++++.++.++..+...... . ....
T Consensus 904 ~~~l~l~~~--~p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1054)
T TIGR01657 904 PVALLMSRN--KPLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPN 975 (1054)
T ss_pred HHHHHHHcC--CchhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCcc
Confidence 999998887 58899999887 36899999999999999999988877766554211 0 0123
Q ss_pred hhhHHHHHHHHHHHHHhh
Q 002275 922 EVSMVALSGCIWLQAFVV 939 (944)
Q Consensus 922 ~~~~~~f~~~~~~~~~~~ 939 (944)
..+|++|....+.++...
T Consensus 976 ~~~T~~f~~~~~~~~~~~ 993 (1054)
T TIGR01657 976 LLNTVLFFVSSFQYLITA 993 (1054)
T ss_pred HHHHHHHHHHHHHHHHhe
Confidence 446888865555555443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-97 Score=894.92 Aligned_cols=721 Identities=18% Similarity=0.229 Sum_probs=538.2
Q ss_pred ccccccCCCceeeecccc-ccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~-~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~ 89 (944)
++|+++||+|+++.++.+ +| +.|++||++|++++++++++++++.. .+...+.++++++++.++++++++
T Consensus 74 ~~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~p~~~lL~~aa~ls~~~~-----~~~~a~~I~~iv~i~~~i~~~qe~ 144 (902)
T PRK10517 74 ESAREQHGENELPAQKPLPWW----VHLWVCYRNPFNILLTILGAISYATE-----DLFAAGVIALMVAISTLLNFIQEA 144 (902)
T ss_pred HHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 379999999999998865 55 89999999999988888888877532 223344566677789999999999
Q ss_pred HHhhh---hHHhcceEEEEEEC------CeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCC
Q 002275 90 NRYLS---DKKANEKEVWVVKQ------GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (944)
Q Consensus 90 ~~~~~---~~~~~~~~~~V~r~------g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs 160 (944)
++.++ ++++.+.+++|+|| |++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||||
T Consensus 145 ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES 220 (902)
T PRK10517 145 RSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGES 220 (902)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCC
Confidence 98765 56667889999999 789999999999999999999999999999996544 899999999999
Q ss_pred CceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEE
Q 002275 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (944)
Q Consensus 161 ~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~ 240 (944)
.|+.|.+.+.. +.+..+.+.+|++|+||.+.+| .+.++|++
T Consensus 221 ~PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~V~~G-~~~~vV~a 261 (902)
T PRK10517 221 LPVEKFATTRQ--------------------------------------PEHSNPLECDTLCFMGTNVVSG-TAQAVVIA 261 (902)
T ss_pred Cceeccccccc--------------------------------------ccccCccccccceeeCceEeee-eEEEEEEE
Confidence 99999653110 0111223678999999999999 69999999
Q ss_pred ecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHH
Q 002275 241 TGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL 317 (944)
Q Consensus 241 tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (944)
||.+|.+|++.+ ..+.+++|+++.+++++.++..++++++.+.++++... ..+|...+.+++
T Consensus 262 tG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~---------------~~~~~~~l~~al 326 (902)
T PRK10517 262 TGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT---------------KGDWWEAALFAL 326 (902)
T ss_pred eccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---------------cCCHHHHHHHHH
Confidence 999999998754 34556799999999999887777666665554443211 123445555444
Q ss_pred HHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEE
Q 002275 318 RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 397 (944)
Q Consensus 318 ~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~ 397 (944)
+ +++.++|++||+.+.++...++. +|.++ ++++|+++++|+||++|+||||||||||+|+|+|.++.
T Consensus 327 s---v~V~~~Pe~LP~~vt~~la~g~~------~mak~----~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~ 393 (902)
T PRK10517 327 S---VAVGLTPEMLPMIVTSTLARGAV------KLSKQ----KVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT 393 (902)
T ss_pred H---HHHHHcccHHHHHHHHHHHHHHH------HHHhC----CcEEecchhhhhccCCCEEEecCCCccccceEEEEEEe
Confidence 4 66778999998766655555443 45444 38899999999999999999999999999999998763
Q ss_pred EcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeec
Q 002275 398 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (944)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~ 477 (944)
... + .+..+++...++|.... . ..+||.|.|+++++...+.
T Consensus 394 ~~~---~--------------------~~~~~ll~~a~l~~~~~-----~-----~~~~p~d~All~~a~~~~~------ 434 (902)
T PRK10517 394 DIS---G--------------------KTSERVLHSAWLNSHYQ-----T-----GLKNLLDTAVLEGVDEESA------ 434 (902)
T ss_pred cCC---C--------------------CCHHHHHHHHHhcCCcC-----C-----CCCCHHHHHHHHHHHhcch------
Confidence 100 0 00123444444443221 1 1479999999999865321
Q ss_pred CcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC----C-------chhHHHHH
Q 002275 478 ASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q-------QTRTFVEA 546 (944)
Q Consensus 478 ~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~----~-------~~~~~~~~ 546 (944)
......|+.++++||++++|+|+++++.. ++.+.+++||+||.++++|... . ..+++.+.
T Consensus 435 --------~~~~~~~~~~~~~pFds~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 505 (902)
T PRK10517 435 --------RSLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRV 505 (902)
T ss_pred --------hhhhhcCceEEEeeeCCCcceEEEEEEEC-CCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHH
Confidence 01123466788999999999999999864 4567899999999999999631 1 12446677
Q ss_pred HHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHH
Q 002275 547 VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLR 626 (944)
Q Consensus 547 ~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~ 626 (944)
.++++.+|+||+++|||+++.++.. + ....|+|++|+|+++|+||+||+++++|++|+
T Consensus 506 ~~~~a~~G~rvlavA~k~~~~~~~~-~---------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~ 563 (902)
T PRK10517 506 TDTLNRQGLRVVAVATKYLPAREGD-Y---------------------QRADESDLILEGYIAFLDPPKETTAPALKALK 563 (902)
T ss_pred HHHHHhcCCEEEEEEEecCCccccc-c---------------------ccccccCceeeehHhhhCcchhhHHHHHHHHH
Confidence 8899999999999999988653210 0 00126899999999999999999999999999
Q ss_pred HcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHH
Q 002275 627 KAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIAL 706 (944)
Q Consensus 627 ~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~ 706 (944)
++||+++|+|||+..+|.++|+++||... . +++|..++...
T Consensus 564 ~aGI~v~miTGD~~~tA~~IA~~lGI~~~--~-------------------------------------v~~G~el~~l~ 604 (902)
T PRK10517 564 ASGVTVKILTGDSELVAAKVCHEVGLDAG--E-------------------------------------VLIGSDIETLS 604 (902)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCcc--C-------------------------------------ceeHHHHHhCC
Confidence 99999999999999999999999999421 1 12233222211
Q ss_pred HHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeec
Q 002275 707 KHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (944)
Q Consensus 707 ~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~ 786 (944)
++ .+.+ ...+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|+|++||||||| |++.+.++++||+|+.
T Consensus 605 ~~---el~~--~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm-g~gtdvAkeaADiVLl 678 (902)
T PRK10517 605 DD---ELAN--LAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV-DGAVDIAREAADIILL 678 (902)
T ss_pred HH---HHHH--HHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe-CCcCHHHHHhCCEEEe
Confidence 11 0111 1233579999999999999999999999999999999999999999999999 7776667779999999
Q ss_pred cccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCC
Q 002275 787 KFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDL 865 (944)
Q Consensus 787 ~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 865 (944)
++++.... .+.+||++|.|+++++.|.+..|+...+..++..++. +..++.+.|++|+|+++| +|++++.+| +
T Consensus 679 dd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~d--~ 752 (902)
T PRK10517 679 EKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPFD--N 752 (902)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcCC--C
Confidence 98886655 4789999999999999999888876544444433332 224689999999999999 788888888 6
Q ss_pred ChhhhhcCCccccccccCCCCChHHHHH-HHHHHHHHHHHHHhhhhhhhcc-c-Ccc--hhhhhHHHHHHHHHHHHHhhh
Q 002275 866 SEGTVMQHPQILFYCQAGRLLNPSTFAG-WFGRSLFHAIVAFVISIHVYAY-E-KSE--MEEVSMVALSGCIWLQAFVVA 940 (944)
Q Consensus 866 ~~~~~~~~p~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~f~~~~~~~~~~~~ 940 (944)
+++++|++||+ ++...+.. .++.+++.+++.+...+..++. . ... ...+++.+|++++++|+|+++
T Consensus 753 ~~~~~m~~p~r---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~ 823 (902)
T PRK10517 753 VDDEQIQKPQR---------WNPADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVH 823 (902)
T ss_pred CChhhhcCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHH
Confidence 88999999984 22222222 2334444443322222221111 1 111 123556679999999999986
Q ss_pred e
Q 002275 941 L 941 (944)
Q Consensus 941 ~ 941 (944)
.
T Consensus 824 ~ 824 (902)
T PRK10517 824 M 824 (902)
T ss_pred h
Confidence 3
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-97 Score=893.64 Aligned_cols=742 Identities=19% Similarity=0.232 Sum_probs=540.1
Q ss_pred ccccccCCCceeeecccc-ccccchHHHHHHHhhHHHHHHHHHHHHhhccccccc------ccccchhhhHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGPLIFIFAVSATK 83 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~-~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~l~~i~~i~~~~ 83 (944)
++|+++||+|+++.++.+ +| +.|++||++|++++++++++++++...... ..+...+.++++++++.++
T Consensus 52 ~~rl~~~G~N~l~~~~~~~~~----~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i 127 (903)
T PRK15122 52 AERLQRYGPNEVAHEKPPHAL----VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLL 127 (903)
T ss_pred HHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHH
Confidence 479999999999987754 55 889999999999888888888876532110 0122334556667788899
Q ss_pred HHHHHHHHhhh---hHHhcceEEEEEECC------eEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEec
Q 002275 84 EAWDDYNRYLS---DKKANEKEVWVVKQG------IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETA 154 (944)
Q Consensus 84 ~~~~~~~~~~~---~~~~~~~~~~V~r~g------~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes 154 (944)
++++++++.++ ++++.+.+++|+||| ++++|++++|||||+|.|++||+|||||+|+++++ +.||||
T Consensus 128 ~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDES 203 (903)
T PRK15122 128 RFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQA 203 (903)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEcc
Confidence 99999998765 556677899999994 89999999999999999999999999999996554 899999
Q ss_pred cccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceE
Q 002275 155 ALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWA 234 (944)
Q Consensus 155 ~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~ 234 (944)
+|||||.|+.|.+.... +.-+.++ ...+.+....+.+|++|+||.+.+| .+
T Consensus 204 ~LTGES~PV~K~~~~~~--------------~~~~~~~--------------~~~~~~~~~~~~~n~vfaGT~V~~G-~~ 254 (903)
T PRK15122 204 VLTGEALPVEKYDTLGA--------------VAGKSAD--------------ALADDEGSLLDLPNICFMGTNVVSG-TA 254 (903)
T ss_pred ccCCCCcceeeeccccc--------------ccccccc--------------ccccccCCcccccceEEeCCEEEee-eE
Confidence 99999999999641000 0000000 0000111122568999999999999 79
Q ss_pred EEEEEEecCCceeeccCCCC--CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhh
Q 002275 235 CGVAVYTGNETKLGMTRGIP--EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYEL 312 (944)
Q Consensus 235 ~~~V~~tG~~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (944)
.++|++||.+|.+|++.+.. ...++++++.++++...+..++++++.+.+++.... ..++...
T Consensus 255 ~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~---------------~~~~~~~ 319 (903)
T PRK15122 255 TAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT---------------KGDWLEA 319 (903)
T ss_pred EEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---------------cCCHHHH
Confidence 99999999999999875522 445689999999988877666555544443332111 1234455
Q ss_pred hHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceE
Q 002275 313 LVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 392 (944)
Q Consensus 313 ~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~ 392 (944)
+.++++ +++.++|++||+.+.++...+.. +|.++ ++++|+++++|+||++|+||||||||||+|+|+
T Consensus 320 l~~ais---l~V~~~Pe~Lp~~vt~~La~g~~------~mak~----~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~ 386 (903)
T PRK15122 320 LLFALA---VAVGLTPEMLPMIVSSNLAKGAI------AMARR----KVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRII 386 (903)
T ss_pred HHHHHH---HHHHHccchHHHHHHHHHHHHHH------HHHHc----CCeecccchhhhhcCCcEEEecCCcccccCeEE
Confidence 554443 66778999998766655554443 44444 488999999999999999999999999999999
Q ss_pred EEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeE
Q 002275 393 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMV 472 (944)
Q Consensus 393 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~ 472 (944)
|.+++..+. . .+ .+++...++|+ .. + ...+||+|.|+++++.+.+..
T Consensus 387 V~~~~~~~~----~----------------~~---~~~l~~a~l~s-~~----~-----~~~~~p~e~All~~a~~~~~~ 433 (903)
T PRK15122 387 LEHHLDVSG----R----------------KD---ERVLQLAWLNS-FH----Q-----SGMKNLMDQAVVAFAEGNPEI 433 (903)
T ss_pred EEEEEcCCC----C----------------Ch---HHHHHHHHHhC-CC----C-----CCCCChHHHHHHHHHHHcCch
Confidence 998753210 0 01 12333333331 11 0 114799999999999876531
Q ss_pred EEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC----C-------chh
Q 002275 473 LVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q-------QTR 541 (944)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~----~-------~~~ 541 (944)
. ....++.++++||++.+|+|+++++.. ++++++++||+||.++++|..- . .++
T Consensus 434 ~--------------~~~~~~~~~~~pF~s~~k~ms~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~ 498 (903)
T PRK15122 434 V--------------KPAGYRKVDELPFDFVRRRLSVVVEDA-QGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRE 498 (903)
T ss_pred h--------------hhhcCceEEEeeeCCCcCEEEEEEEcC-CCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHH
Confidence 0 122456778899999999999999864 4678899999999999999631 1 124
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHH
Q 002275 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (944)
Q Consensus 542 ~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~a 621 (944)
++.+.+++++.+|+|++++|||.++.++.... ..+..|.|++|+|+++++||+||+++++
T Consensus 499 ~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~a 558 (903)
T PRK15122 499 RLLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAAPA 558 (903)
T ss_pred HHHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHHHH
Confidence 46777889999999999999998865431100 0013468999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchh
Q 002275 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (944)
Q Consensus 622 I~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~ 701 (944)
|++|+++||+++|+|||+..+|.++|+++||... . +++|.+
T Consensus 559 I~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~--~-------------------------------------vi~G~e 599 (903)
T PRK15122 559 IAALRENGVAVKVLTGDNPIVTAKICREVGLEPG--E-------------------------------------PLLGTE 599 (903)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--C-------------------------------------ccchHh
Confidence 9999999999999999999999999999999421 1 122322
Q ss_pred HHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhC
Q 002275 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (944)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~A 781 (944)
++...+. .+.+ ...+..+|+|++|+||.++|+.||+.|+.|+|+|||.||+|||+.||||||| |++.+.++++|
T Consensus 600 l~~~~~~---el~~--~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm-g~gtdvAkeaA 673 (903)
T PRK15122 600 IEAMDDA---ALAR--EVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV-DSGADIAKESA 673 (903)
T ss_pred hhhCCHH---HHHH--HhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe-CcccHHHHHhc
Confidence 2222111 1111 1234679999999999999999999999999999999999999999999999 77666667799
Q ss_pred cEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhh
Q 002275 782 DYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVST 860 (944)
Q Consensus 782 d~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 860 (944)
|+|+.++++.... .+.+||.+|.|+++++.|.+..|+...+..++..++ .+..++.+.|++|.|+++|+ |++++.
T Consensus 674 DiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~~nli~D~-~~lal~ 749 (903)
T PRK15122 674 DIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF---IPFLPMLAIHLLLQNLMYDI-SQLSLP 749 (903)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hccchhHHHHHHHHHHHHHH-HHHhhc
Confidence 9999998886655 478999999999999999988776544443333332 22356899999999999995 899888
Q ss_pred ccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccCcc-hhhhhHHHHHHHHHHHHHhh
Q 002275 861 IDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE-MEEVSMVALSGCIWLQAFVV 939 (944)
Q Consensus 861 ~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~ 939 (944)
+| |+++++| +||+ .++..++++.+++.....+ +.++..+++.++.+...... ...+++++|++++++|+|++
T Consensus 750 ~d--~~~~~~m-~~P~---~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~ 822 (903)
T PRK15122 750 WD--KMDKEFL-RKPR---KWDAKNIGRFMLWIGPTSS-IFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVV 822 (903)
T ss_pred CC--CCCHhhc-CCCC---CCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHH
Confidence 88 6888899 7773 6677788876654222222 22222232222222111101 02356788999999999998
Q ss_pred he
Q 002275 940 AL 941 (944)
Q Consensus 940 ~~ 941 (944)
+.
T Consensus 823 ~~ 824 (903)
T PRK15122 823 HM 824 (903)
T ss_pred Hh
Confidence 64
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-96 Score=889.40 Aligned_cols=722 Identities=18% Similarity=0.205 Sum_probs=535.7
Q ss_pred ccccccCCCceeeecccc-ccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~-~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~ 89 (944)
++|+++||+|+++.++.+ +| +.+++||++|++++++++++++++.. .+...+.++++++++.++++++++
T Consensus 40 ~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~p~~~iL~~~a~ls~~~~-----~~~~~~iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 40 TERLAEFGPNQTVEEKKVPNL----RLLIRAFNNPFIYILAMLMGVSYLTD-----DLEATVIIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHhcCCCcCCCCCCCCHH----HHHHHHHhhHHHHHHHHHHHHHHHHh-----hHHHHHHhhhHHHHHHHHHHHHHH
Confidence 369999999999998754 55 88999999999988888888877542 223334566677778889999999
Q ss_pred HHhhh---hHHhcceEEEEEE------CCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCC
Q 002275 90 NRYLS---DKKANEKEVWVVK------QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (944)
Q Consensus 90 ~~~~~---~~~~~~~~~~V~r------~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs 160 (944)
++.++ ++++.+.+++|+| ||++++|+++||||||||.|++||+|||||+|+++++ +.||||+|||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES 186 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGES 186 (867)
T ss_pred HHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCC
Confidence 88664 5566778999999 9999999999999999999999999999999996544 899999999999
Q ss_pred CceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEE
Q 002275 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (944)
Q Consensus 161 ~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~ 240 (944)
.|+.|.+.+.. ..+....+.+|++|+||.+.+| .+.++|++
T Consensus 187 ~PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~v~~G-~~~~~V~~ 227 (867)
T TIGR01524 187 LPVEKFVEDKR--------------------------------------ARDPEILERENLCFMGTNVLSG-HAQAVVLA 227 (867)
T ss_pred CcccccCCccc--------------------------------------cccccccccccceecCCeEEEe-EEEEEEEE
Confidence 99999653110 0011122568999999999999 79999999
Q ss_pred ecCCceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHH
Q 002275 241 TGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLR 318 (944)
Q Consensus 241 tG~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (944)
||.+|.+|++.+. .+..++|+++.+++++.++..++++++++.++++... ..+|...+..+++
T Consensus 228 tG~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~al~ 292 (867)
T TIGR01524 228 TGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM---------------KGDWLEAFLFALA 292 (867)
T ss_pred EcCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh---------------cCCHHHHHHHHHH
Confidence 9999999987542 2445689999999999988777776665554432111 1234445544444
Q ss_pred HHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEE
Q 002275 319 FELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCI 398 (944)
Q Consensus 319 ~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~ 398 (944)
+++.++|++||+.+.++....+. +|.++ ++++|+++++|+||++++||||||||||+|+|+|.+++.
T Consensus 293 ---l~v~~iP~~Lp~~vt~~la~g~~------~mak~----~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~ 359 (867)
T TIGR01524 293 ---VAVGLTPEMLPMIVSSNLAKGAI------NMSKK----KVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID 359 (867)
T ss_pred ---HHHHhCcchHHHHHHHHHHHHHH------HHHhC----CcEEccchhhhhccCccEEEecCCCccccCeEEEEEEec
Confidence 66778999998766666555544 45444 488999999999999999999999999999999998642
Q ss_pred cCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecC
Q 002275 399 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478 (944)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~ 478 (944)
.. .....+++...++|+... ...+||.|.|+++++......
T Consensus 360 ~~-----------------------~~~~~~~l~~a~l~~~~~----------~~~~~p~~~Al~~~~~~~~~~------ 400 (867)
T TIGR01524 360 SS-----------------------GETSERVLKMAWLNSYFQ----------TGWKNVLDHAVLAKLDESAAR------ 400 (867)
T ss_pred CC-----------------------CCCHHHHHHHHHHhCCCC----------CCCCChHHHHHHHHHHhhchh------
Confidence 10 000123344444433211 114699999999998753210
Q ss_pred cEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC-----------CchhHHHHHH
Q 002275 479 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAV 547 (944)
Q Consensus 479 ~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~-----------~~~~~~~~~~ 547 (944)
.....++.++.+||+|++|+|++++++. ++.+++++||+||.++++|+.. +..+++.+.+
T Consensus 401 --------~~~~~~~~~~~~pF~s~~k~ms~~v~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~ 471 (867)
T TIGR01524 401 --------QTASRWKKVDEIPFDFDRRRLSVVVENR-AEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471 (867)
T ss_pred --------hHhhcCceEEEeccCCCcCEEEEEEEcC-CceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHH
Confidence 1123466778899999999999999864 3457899999999999999631 1134577788
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHH
Q 002275 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (944)
Q Consensus 548 ~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~ 627 (944)
++++.+|+|++++|||+++.++.. + .+..|.+++|+|+++++||+|++++++|++|++
T Consensus 472 ~~~a~~G~rvlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~ 529 (867)
T TIGR01524 472 AEMNRQGIRVIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFK 529 (867)
T ss_pred HHHHhcCCEEEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHH
Confidence 999999999999999988654310 0 012357999999999999999999999999999
Q ss_pred cCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHH
Q 002275 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (944)
Q Consensus 628 ~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~ 707 (944)
+||+++|+|||+..+|.++|+++||.... .+.|. +++...+
T Consensus 530 aGI~vvmiTGD~~~tA~aIA~~lGI~~~~------v~~g~---------------------------------~l~~~~~ 570 (867)
T TIGR01524 530 NGINVKVLTGDNEIVTARICQEVGIDAND------FLLGA---------------------------------DIEELSD 570 (867)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCCCCC------eeecH---------------------------------hhhhCCH
Confidence 99999999999999999999999995321 11222 2211111
Q ss_pred HHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeecc
Q 002275 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (944)
Q Consensus 708 ~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~ 787 (944)
. .+.+ ...+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||||||| |++.+.++++||+|+.+
T Consensus 571 ~---el~~--~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm-g~gtdvAk~aADiVLld 644 (867)
T TIGR01524 571 E---ELAR--ELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV-DTAADIAKEASDIILLE 644 (867)
T ss_pred H---HHHH--HhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe-CCccHHHHHhCCEEEec
Confidence 0 0111 1234679999999999999999999999999999999999999999999999 77666677799999999
Q ss_pred ccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCC
Q 002275 788 FRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLS 866 (944)
Q Consensus 788 ~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 866 (944)
+++.... .+.+||++|+|+++++.|.+..|+...+..++..++ ....++++.|++|+|+++| +|++++++| ++
T Consensus 645 d~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~inl~~d-~~~~al~~~--~~ 718 (867)
T TIGR01524 645 KSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF---IPFLPMLSLHLLIQNLLYD-FSQLTLPWD--KM 718 (867)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHH-HHHHhhcCC--CC
Confidence 8886655 478999999999999999987777544443333332 1224689999999999999 799999988 68
Q ss_pred hhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHh---hhhhhhccc-CcchhhhhHHHHHHHHHHHHHhhhe
Q 002275 867 EGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFV---ISIHVYAYE-KSEMEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 867 ~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
++++|++|+. .+... ....+...+++.+++.+. +.+..+... ......+++.+|++++++|+++++.
T Consensus 719 ~~~~m~~p~~----~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 719 DREFLKKPHQ----WEQKG----MGRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred ChHhhCCCCC----CChhh----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 8999988873 22222 222223344443332222 222111101 1112235788899999999999864
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-94 Score=860.19 Aligned_cols=699 Identities=20% Similarity=0.205 Sum_probs=533.4
Q ss_pred ccccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~~ 90 (944)
++|+++||+|+++.++.++| +.|+++|++|+++.++++++++++.. + +.....++++++++..++++++++
T Consensus 8 ~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~~----~-~~~~~~i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 8 KKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIALE----N-WVDFVIILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhhc----c-hhhhhhhhhhhHHHHHHHHHHHHH
Confidence 47999999999998666655 78899999999888888888887643 2 233345566677788899999999
Q ss_pred Hhhh---hHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeec
Q 002275 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (944)
Q Consensus 91 ~~~~---~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~ 167 (944)
+.++ ++++.+++++|+|||++++|+++||||||||.|++||+|||||+++++++ +.||||+|||||.|+.|
T Consensus 79 a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K-- 152 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTK-- 152 (755)
T ss_pred HHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEe--
Confidence 8775 45557889999999999999999999999999999999999999994433 99999999999999999
Q ss_pred cccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCcee
Q 002275 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (944)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~ 247 (944)
..+|.+|+||.+.+| .+.++|++||.+|.+
T Consensus 153 -------------------------------------------------~~~~~v~aGT~v~~G-~~~~~V~~tG~~T~~ 182 (755)
T TIGR01647 153 -------------------------------------------------KTGDIAYSGSTVKQG-EAEAVVTATGMNTFF 182 (755)
T ss_pred -------------------------------------------------ccCCeeeccCEEEcc-EEEEEEEEcCCccHH
Confidence 346799999999999 799999999999999
Q ss_pred eccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHHhc
Q 002275 248 GMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCS 324 (944)
Q Consensus 248 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (944)
|++.+ ..+..++++++.+++++.++.++.++++++.++++.... ..++...+.++++ +++
T Consensus 183 g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~i~---vlv 245 (755)
T TIGR01647 183 GKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR--------------GESFREGLQFALV---LLV 245 (755)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------CCCHHHHHHHHHH---HHH
Confidence 98654 444566899999999999888777776666655542211 1234444444433 677
Q ss_pred cccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeec
Q 002275 325 IMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG 404 (944)
Q Consensus 325 ~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~ 404 (944)
.++|++||+.+.++...... +|.++ ++++|+++++|+||++|++|||||||||+|+|+|.+++..+..+
T Consensus 246 ~a~P~~Lp~~~~~~la~g~~------r~ak~----gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~- 314 (755)
T TIGR01647 246 GGIPIAMPAVLSVTMAVGAA------ELAKK----KAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF- 314 (755)
T ss_pred HhCCcchHHHHHHHHHHHHH------HHHhC----CeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC-
Confidence 88999998777666655544 45444 48999999999999999999999999999999999987542100
Q ss_pred CCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEE
Q 002275 405 NETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIK 484 (944)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~ 484 (944)
+..+++...++|+. ..++||.|.|+++++++.+.
T Consensus 315 ---------------------~~~~~l~~a~~~~~------------~~~~~pi~~Ai~~~~~~~~~------------- 348 (755)
T TIGR01647 315 ---------------------DKDDVLLYAALASR------------EEDQDAIDTAVLGSAKDLKE------------- 348 (755)
T ss_pred ---------------------CHHHHHHHHHHhCC------------CCCCChHHHHHHHHHHHhHH-------------
Confidence 11234455555542 11479999999998875431
Q ss_pred ECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC-CchhHHHHHHHHHHhccceEEEEEEE
Q 002275 485 FNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-QQTRTFVEAVEQYSQLGLRTLCLAWR 563 (944)
Q Consensus 485 ~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~G~rvl~~A~k 563 (944)
....++.++.+||++.+|+|+++++..++|+.++++||+||.+++.|+.. ..++++.+.+++++.+|+|++++|+|
T Consensus 349 ---~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~ 425 (755)
T TIGR01647 349 ---ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVART 425 (755)
T ss_pred ---HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEE
Confidence 12345677889999999999999987655778889999999999999753 23466788899999999999999997
Q ss_pred ecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002275 564 EVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTA 643 (944)
Q Consensus 564 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a 643 (944)
+. |.+++|+|+++++||+||+++++|++||++||+++|+|||+..+|
T Consensus 426 ~~---------------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 472 (755)
T TIGR01647 426 DE---------------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIA 472 (755)
T ss_pred cC---------------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 21 368999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhcccee
Q 002275 644 IQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTA 723 (944)
Q Consensus 644 ~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (944)
.++|+++||..... .+.. + .++...+...+ +.+.+ ...+..
T Consensus 473 ~~IA~~lGI~~~~~-------~~~~---l------------------------~~~~~~~~~~~---~~~~~--~~~~~~ 513 (755)
T TIGR01647 473 KETARRLGLGTNIY-------TADV---L------------------------LKGDNRDDLPS---GELGE--MVEDAD 513 (755)
T ss_pred HHHHHHcCCCCCCc-------CHHH---h------------------------cCCcchhhCCH---HHHHH--HHHhCC
Confidence 99999999954211 0000 0 00000000000 00111 122356
Q ss_pred EEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-Hhhhhhhh
Q 002275 724 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYS 802 (944)
Q Consensus 724 v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~ 802 (944)
+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|+|+.||||||| |++.+.++++||+|+.++++.... .+.+||.+
T Consensus 514 vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~ 592 (755)
T TIGR01647 514 GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AGATDAARSAADIVLTEPGLSVIVDAILESRKI 592 (755)
T ss_pred EEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 777777777999999998886665 57899999
Q ss_pred hhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCcccccccc
Q 002275 803 YNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQA 882 (944)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~y~~~~~ 882 (944)
|+|+++++.|.+..|+...+..++..++. +.+ ++++|++|.|++.+. |++++.+|+..+ + ++|. +
T Consensus 593 ~~ni~k~i~~~~~~n~~~~~~~~~~~l~~---~~~-l~~~~il~~~l~~d~-~~~~l~~~~~~~-~---~~p~------~ 657 (755)
T TIGR01647 593 FQRMKSYVIYRIAETIRIVFFFGLLILIL---NFY-FPPIMVVIIAILNDG-TIMTIAYDNVKP-S---KLPQ------R 657 (755)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHh---Ccc-hhHHHHHHHHHHHhH-hHhhccCCCCCC-C---CCCC------c
Confidence 99999999999888876544433333322 234 899999999999996 688889985221 1 2232 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhhhhhhhc----ccC----cchhhhhHHHHHHHHHHHHHhhhe
Q 002275 883 GRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA----YEK----SEMEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
. .++ ..+...+..+++.++..+.+.++.+. ... .....++|++|++++++|.|+++.
T Consensus 658 ~-~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 722 (755)
T TIGR01647 658 W-NLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFV 722 (755)
T ss_pred c-chH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHhe
Confidence 1 122 34444455666666655544443332 111 123478999999999999999864
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=754.00 Aligned_cols=772 Identities=21% Similarity=0.241 Sum_probs=590.7
Q ss_pred ccccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhccccccc--------ccccchhhhHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV--------NPASTWGPLIFIFAVSAT 82 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~l~~i~~i~~~ 82 (944)
.+++.+-|+|.++.+|.+.- +..|.+|++..+.+.+++.++++++.+.... +..+.-+.+..++++..+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~---wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPE---WIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChH---HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 36899999999999987531 2568889998888888888888776432111 011112445556666777
Q ss_pred HHHHHHHHHhh---hhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCC
Q 002275 83 KEAWDDYNRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (944)
Q Consensus 83 ~~~~~~~~~~~---~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGE 159 (944)
..++|+.+..+ +.+.+.|+.|+|+|||....+.+++|||||+|.++-|++||||.+++++.+ |+||+|+||||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGe 217 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGE 217 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccc
Confidence 88888877644 567788999999999999999999999999999999999999999999988 99999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEE
Q 002275 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (944)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~ 239 (944)
|+|..+.+. -.+..|++..|+.+.+|.+.+| .++|+|+
T Consensus 218 sEP~~~~~~-----------------------------------------~t~~~~~Et~Ni~f~st~~veG-~~~givi 255 (1019)
T KOG0203|consen 218 SEPQTRSPE-----------------------------------------FTHENPLETRNIAFFSTNCVEG-TGRGIVI 255 (1019)
T ss_pred cCCccCCcc-----------------------------------------ccccCchhheeeeeeeeEEecc-eEEEEEE
Confidence 999988542 1122346889999999999999 7999999
Q ss_pred EecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhH
Q 002275 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (944)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (944)
+||.+|.+|+++. ..+..++|+++.++++..++...++++.+.++++.... +..|...+++
T Consensus 256 ~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~---------------gy~~l~avv~- 319 (1019)
T KOG0203|consen 256 ATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL---------------GYEWLRAVVF- 319 (1019)
T ss_pred ecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh---------------cchhHHHhhh-
Confidence 9999999999876 34667899999999999988888777776666554332 1133333333
Q ss_pred HHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEE
Q 002275 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (944)
Q Consensus 317 ~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i 396 (944)
++.+++..+|.+|++++......-++ +|.+++ +++||+.++|+||+.++||+|||||||+|+|+|.++
T Consensus 320 --~i~iivAnvPeGL~~tvTv~Ltltak------rMa~Kn----c~vknLeavetlGsts~I~SDktGTlTqnrMtVahl 387 (1019)
T KOG0203|consen 320 --LIGIIVANVPEGLLATVTVCLTLTAK------RMARKN----CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHL 387 (1019)
T ss_pred --hheeEEecCcCCccceehhhHHHHHH------HHhhce----eEEeeeeheeecccceeEeecceeeEEecceEEEee
Confidence 33477888999998877766665555 565554 899999999999999999999999999999999999
Q ss_pred EEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCcee---eecCCccHHHHHHHHHhCCeEE
Q 002275 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAIL---YKAQSQDEEALVHAAAQLHMVL 473 (944)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~---~~~~~p~e~all~~a~~~g~~~ 473 (944)
|.++.....+.....+ .......++....+.++..+||.+.....+++... -..|++.|.||++++.-.--.
T Consensus 388 w~d~~i~~~d~~~~~~----~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~- 462 (1019)
T KOG0203|consen 388 WFDNQIHEADTTEDQS----GQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGS- 462 (1019)
T ss_pred ccCCceeeeechhhhh----cccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcch-
Confidence 9988655432211111 11112236778899999999999988765544321 225899999999999743211
Q ss_pred EeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecC--CCcEEEEecCchhhccccccc-----------CCch
Q 002275 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHA-----------GQQT 540 (944)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~--~~~~~l~~KGa~e~i~~~~~~-----------~~~~ 540 (944)
....+..++.+.++||+|.+|+.-.+.+..+ +.++.+.+|||||.++++|+. .+..
T Consensus 463 -----------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~ 531 (1019)
T KOG0203|consen 463 -----------VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLK 531 (1019)
T ss_pred -----------HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHH
Confidence 1223566778889999999999988887542 357899999999999999973 1223
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHH
Q 002275 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (944)
Q Consensus 541 ~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~ 620 (944)
+.+.+...++...|-||++||++.++++++.+...-.- .. .+.--.++.|+|++++-||+|..+++
T Consensus 532 ~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~----d~----------~n~p~~nl~FlGl~s~idPPR~~vP~ 597 (1019)
T KOG0203|consen 532 EAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT----DD----------VNFPTDNLRFLGLISMIDPPRAAVPD 597 (1019)
T ss_pred HHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec----CC----------CCCcchhccccchhhccCCCcccCch
Confidence 56788889999999999999999998876553211000 00 01223689999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcch
Q 002275 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (944)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 700 (944)
|+.+||.+|||+.|+|||++.||.++|++.||+..... ..++....... .-.........+.++.|.
T Consensus 598 Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e---------t~e~~a~r~~~----~v~~vn~~~a~a~VihG~ 664 (1019)
T KOG0203|consen 598 AVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE---------TVEDIAKRLNI----PVEQVNSRDAKAAVIHGS 664 (1019)
T ss_pred hhhhhhhhCceEEEEecCccchhhhhhhheeeecCCch---------hhhhhHHhcCC----cccccCccccceEEEecc
Confidence 99999999999999999999999999999998765432 11111111000 000111222456778888
Q ss_pred hHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhh-
Q 002275 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR- 779 (944)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~- 779 (944)
++....++. ..++.......+|+|.+|+||..||+..|+.|..|+++|||+||.|+||.||+|||| |-++.++.+
T Consensus 665 eL~~~~~~q---ld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM-GiaGSDvsKq 740 (1019)
T KOG0203|consen 665 ELPDMSSEQ---LDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVSKQ 740 (1019)
T ss_pred cccccCHHH---HHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee-ccccchHHHh
Confidence 776554332 233333455689999999999999999999999999999999999999999999999 777776666
Q ss_pred hCcEeeccccchhHHH-hhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccc-hhhhHHHHhhhhhhhhhHh
Q 002275 780 AADYSIGKFRFLKRLI-LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL-FNSVSLMAYNVFYTSIPVL 857 (944)
Q Consensus 780 ~Ad~v~~~~~~l~~l~-l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~~~~~~~~~~ 857 (944)
+||+|+.|+++.+.+. +.+||.+|+|.++.+.|.+..|+.=..+-++| .+.|.|+ +..+++|.+.+..|.+|++
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~f----i~~giPLplgtitIL~IDLgTDmvPAi 816 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLF----ILFGIPLPLGTVTILCIDLGTDIVPAI 816 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHH----HHhCCCcccchhhhhhhHhhcccchhh
Confidence 8999999999988873 78999999999999999988776533332222 3345665 8899999999999999999
Q ss_pred hhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHH-HHHHHHHHHHhhhhhhhc
Q 002275 858 VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYA 914 (944)
Q Consensus 858 ~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 914 (944)
+++|| .+|.++|++||+ ..+.+++.|.+.+...++ .+.+|++..|+..|..++
T Consensus 817 SLAYE--~aEsDIM~r~PR--~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima 870 (1019)
T KOG0203|consen 817 SLAYE--KAESDIMLRPPR--NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMA 870 (1019)
T ss_pred hHhcc--CchhhHHhcCCC--CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 599999999996 457889999998776554 788888887777666553
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-85 Score=730.80 Aligned_cols=784 Identities=19% Similarity=0.256 Sum_probs=549.7
Q ss_pred cccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~~~ 91 (944)
+|+.-||+|.+..+.++.+ .+|.++...|+.+ +-+..+.+|.. .++..+...++++.+.|.....++..+.
T Consensus 168 ~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYl--FQ~fSv~lW~~---d~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 168 DRRIIYGRNVISLPIKSIS----QILVKEVLNPFYL--FQAFSVALWLA---DSYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred hHHhhcCCceeeeecccHH----HHHHHhccchHHH--HHhHHhhhhhc---ccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 5888999999999999877 7788888888743 33333333322 2233334445556667788888888877
Q ss_pred hhhhHHhc--ceEEEEEECCeEEEEeeccCccccEEEEec-CccccccEEEEeccCCCceEEEEeccccCCCCceeeecc
Q 002275 92 YLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLRE-NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (944)
Q Consensus 92 ~~~~~~~~--~~~~~V~r~g~~~~I~~~~lvvGDII~l~~-G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~ 168 (944)
.+..+++. ...|+|+|||.|++|.++|||||||+.+.+ |-..|||++|+ +|.|.||||+|||||.|+.|.|.
T Consensus 239 s~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li-----~g~civNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI-----SGDCIVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE-----eCcEEeecccccCCcccccccCC
Confidence 77777664 357899999999999999999999999999 99999999999 88899999999999999999876
Q ss_pred ccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeec-----CceEEEEEEEecC
Q 002275 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN-----TEWACGVAVYTGN 243 (944)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~-----g~~~~~~V~~tG~ 243 (944)
+.-.... ... .........+.+|.||.+.+ |+.+.++|++||.
T Consensus 314 ~~~~~~~-------~~~-------------------------~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF 361 (1140)
T KOG0208|consen 314 PMGTDSL-------DSI-------------------------TISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGF 361 (1140)
T ss_pred ccccccC-------cCe-------------------------eechhhcCcceeeccceEEEeecCCCCceEEEEEeccc
Confidence 4111000 000 00011145789999999876 4579999999999
Q ss_pred CceeeccCC-CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHH
Q 002275 244 ETKLGMTRG-IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (944)
Q Consensus 244 ~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (944)
+|..|++.+ ...+|..+++.+-|.+..+.+..++.++.+++.+..... .+.+...++ ++.+.+
T Consensus 362 ~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-------------~g~~~~~ii---irsLDl 425 (1140)
T KOG0208|consen 362 STTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-------------LGVPLKTII---IRSLDL 425 (1140)
T ss_pred cccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-------------cCCCHHHHh---hhhhcE
Confidence 999998755 455666666666666555444443333332222211110 122333333 344458
Q ss_pred hccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEe
Q 002275 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (944)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (944)
+...+|++||.++++....... +++++ ++.+.+++.+-..|++|++|||||||||++.+.+-.+..-...
T Consensus 426 iTi~VPPALPAaltvG~~~a~~------RLkkk----~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~ 495 (1140)
T KOG0208|consen 426 ITIVVPPALPAALTVGIIYAQS------RLKKK----GIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERN 495 (1140)
T ss_pred EEEecCCCchhhhhHHHHHHHH------HHHhc----CeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccc
Confidence 8899999999888877655443 34333 4889999999999999999999999999999999888753221
Q ss_pred ecCC--CCCCCCc--hhhhhh-hcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeec
Q 002275 403 YGNE--TGDALKD--VGLLNA-ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (944)
Q Consensus 403 ~~~~--~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~ 477 (944)
-... ......+ ....+. ..........+..++|.||+..... |.+ .|||.|.-+.+. .|+.+...+
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~---g~l---~GDPLdlkmfe~---t~w~~ee~~ 566 (1140)
T KOG0208|consen 496 VDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVD---GTL---VGDPLDLKMFES---TGWVYEEAD 566 (1140)
T ss_pred ccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeC---Cee---ccCceeeeeeec---cceEEEecc
Confidence 1000 0000000 000111 1111222457899999999877653 332 477887665543 345443321
Q ss_pred C-----------cEEEEEE-----CC----eEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC
Q 002275 478 A-----------SILEIKF-----NG----SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 537 (944)
Q Consensus 478 ~-----------~~~~~~~-----~~----~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~ 537 (944)
. ....++. ++ ....+-+++.+||+|..+||||||+++.+++..+|+|||||.|.+.|+++
T Consensus 567 ~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~ 646 (1140)
T KOG0208|consen 567 IEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE 646 (1140)
T ss_pred ccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc
Confidence 0 0011111 11 11268899999999999999999999888899999999999999999999
Q ss_pred CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCC
Q 002275 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (944)
Q Consensus 538 ~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~ 617 (944)
..+.++++.++.|+.+|+||+|+|+|.++.. .|.+. ..-.++.+|+||+|+|++.||+++|++
T Consensus 647 tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~--------------~~~~Rd~vEs~l~FlGLiVmeNkLK~~ 709 (1140)
T KOG0208|consen 647 TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKA--------------QKLSRDTVESNLEFLGLIVMENKLKEE 709 (1140)
T ss_pred cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHH--------------hhccHhhhhccceeeEEEEeecccccc
Confidence 9999999999999999999999999999875 22221 112346889999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHH----------HHHH----HHHHH--
Q 002275 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV----------CRSL----ERVLL-- 681 (944)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~----------~~~~----~~~~~-- 681 (944)
++.+|++|+++.|+.+|+|||+..||..+|++||++.+...-.+...+....+.. .... +...+
T Consensus 710 T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~ 789 (1140)
T KOG0208|consen 710 TKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLA 789 (1140)
T ss_pred cHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCcccc
Confidence 9999999999999999999999999999999999998865422222221110000 0000 00000
Q ss_pred --HhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhh
Q 002275 682 --TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (944)
Q Consensus 682 --~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~m 759 (944)
..........++.+.++|+.++.+.+...+.++++. .+..+|||++|.||.++|+.+|+.+..|+|+|||.||+.|
T Consensus 790 ~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il--~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgA 867 (1140)
T KOG0208|consen 790 SVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKIL--LKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGA 867 (1140)
T ss_pred CCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHH--hcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhh
Confidence 001112234568899999999998876666666653 4578999999999999999999999999999999999999
Q ss_pred hhhcCeeEEecccchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHH-HHHHHHHhhhcccccc
Q 002275 760 IQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC-FIQIFFSFISGLSGTS 837 (944)
Q Consensus 760 l~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 837 (944)
||+||+||+.+.++ |.-+|.+...-.+--..+ ++.|||+.+... |..+|.+.++ +++|.-.++ .+.-..
T Consensus 868 LKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTS-----f~~FkYMalYs~iqFisv~~-LY~~~~ 938 (1140)
T KOG0208|consen 868 LKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTS-----FACFKYMALYSAIQFISVVF-LYLINS 938 (1140)
T ss_pred hhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhh-----HHHHHHHHHHHHHHHHhhhe-eeeecc
Confidence 99999999995444 666888887744443333 479999988876 5555555544 455554444 344455
Q ss_pred chhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhh
Q 002275 838 LFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV 912 (944)
Q Consensus 838 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (944)
.++..|.++.+++..+.-++++... ++.++..-.+|+ ..+++.+.+...+++.++..++-+..++..
T Consensus 939 nl~D~Qfl~iDLlii~pia~~m~~~-~a~~~L~~~rP~-------~~L~s~~~~~~l~~q~vli~l~q~i~~l~~ 1005 (1140)
T KOG0208|consen 939 NLGDLQFLFIDLLIITPIAVMMSRF-DASDKLFPKRPP-------TNLLSKKILVPLLLQIVLICLVQWILTLIV 1005 (1140)
T ss_pred cccchhhhhhHHHHHHHHHHHHccC-cHHHHhcCCCCC-------ccccccchhhhhHHHHHHHHHHHHhhheee
Confidence 6799999999988876555544433 334333334444 468888888877777777777766666654
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-76 Score=675.67 Aligned_cols=542 Identities=18% Similarity=0.212 Sum_probs=402.5
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccc-----cc-ccchhhhHHHHHHHHHH----HHHHHHHHhhh---hHHhcce-EE
Q 002275 38 WEQFSRFMNQYFLLIACLQLWSLITPV-----NP-ASTWGPLIFIFAVSATK----EAWDDYNRYLS---DKKANEK-EV 103 (944)
Q Consensus 38 ~~~f~~~~~~~~l~~~~~~~~~~~~~~-----~~-~~~~~~l~~i~~i~~~~----~~~~~~~~~~~---~~~~~~~-~~ 103 (944)
-.+|++|+.+.+++.++++++....+. .+ ..+.+.++++++++.++ |.+.++|..++ ++++.++ ++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 357789998888888888776442211 10 01112233333334444 44446666554 4455554 67
Q ss_pred E-EEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeeccccccCCCHhhhccc
Q 002275 104 W-VVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (944)
Q Consensus 104 ~-V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~ 182 (944)
+ |.|||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+.
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g-------------- 167 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVI-----KGLATVDESAITGESAPVIKESG-------------- 167 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEE-----EcceEEecchhcCCCCceeccCC--------------
Confidence 6 679999999999999999999999999999999999 67789999999999999999431
Q ss_pred eEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccCC---CCCCccc
Q 002275 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (944)
Q Consensus 183 ~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~ 259 (944)
...+.+++||.+.+| ++.++|+++|.+|.+|++.+ ..+.+++
T Consensus 168 ----------------------------------~d~~~V~aGT~v~~G-~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 168 ----------------------------------GDFDNVIGGTSVASD-WLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred ----------------------------------CccCeeecCceeecc-eEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 111349999999999 79999999999999998744 4555678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHH
Q 002275 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (944)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~ 339 (944)
|+|.....+...+..+.+ +++.++.. .+. | . .+...+.+.+. +++.++|++|+..++++.
T Consensus 213 p~e~~l~~l~~~l~ii~l--~~~~~~~~-~~~--------~----~--~~~~~~~~~va---l~V~~IP~aL~~~~~~~~ 272 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFL--VVILTMYP-LAK--------F----L--NFNLSIAMLIA---LAVCLIPTTIGGLLSAIG 272 (673)
T ss_pred HHHHHHHHHHHHHhHHHH--HHHHHHHH-HHh--------h----c--cHHHHHHHHHH---HHHHhhhhhHHHHHHHHH
Confidence 998766554433322111 11111110 000 0 0 11111122222 344567999876666554
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCCCCCchhhhhh
Q 002275 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (944)
Q Consensus 340 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 419 (944)
..+.. +|.+. ++++|++.++|+||++|++|||||||||+|++.+.++...+
T Consensus 273 ~~g~~------r~ak~----gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------------- 323 (673)
T PRK14010 273 IAGMD------RVTQF----NILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------------- 323 (673)
T ss_pred HHHHH------HHhhC----CEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------------
Confidence 44433 44444 48999999999999999999999999999887776643210
Q ss_pred hcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeec
Q 002275 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 499 (944)
Q Consensus 420 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 499 (944)
..+..+++...+.|+.. +.||.+.|+++++++.++... ....+..|
T Consensus 324 ----~~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~a~~~~~~~~-----------------~~~~~~~p 369 (673)
T PRK14010 324 ----SSSFERLVKAAYESSIA-------------DDTPEGRSIVKLAYKQHIDLP-----------------QEVGEYIP 369 (673)
T ss_pred ----CccHHHHHHHHHHhcCC-------------CCChHHHHHHHHHHHcCCCch-----------------hhhcceec
Confidence 11223455666667632 369999999999987664310 00123479
Q ss_pred CCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC--CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 002275 500 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (944)
Q Consensus 500 f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~ 577 (944)
|++++|+|++.++ ++ .+.||+++.+++.|... ..+.++.+..++++.+|+|+++++
T Consensus 370 F~~~~k~~gv~~~----g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT----TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------- 427 (673)
T ss_pred cccccceeEEEEC----CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE----------------
Confidence 9999999998753 32 45599999999999742 224457777889999999999987
Q ss_pred HHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCC
Q 002275 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (944)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~ 657 (944)
.|++++|+++++|++|++++++|++||++||+++|+|||+..+|.++|+++|+
T Consensus 428 ----------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI----- 480 (673)
T PRK14010 428 ----------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----- 480 (673)
T ss_pred ----------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-----
Confidence 47899999999999999999999999999999999999999999999999998
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHH
Q 002275 658 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 737 (944)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 737 (944)
..+++|++|+||.++|
T Consensus 481 ----------------------------------------------------------------~~v~A~~~PedK~~iV 496 (673)
T PRK14010 481 ----------------------------------------------------------------DRFVAECKPEDKINVI 496 (673)
T ss_pred ----------------------------------------------------------------ceEEcCCCHHHHHHHH
Confidence 2478899999999999
Q ss_pred HHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhH
Q 002275 738 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYK 816 (944)
Q Consensus 738 ~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~ 816 (944)
+.+|+.|+.|+|+|||.||+|+|++||||||| |++.+.++++||+|+.++++.... .+.+||.+|.|+++++.|.+..
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~ 575 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAM-NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIAN 575 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEe-CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeec
Confidence 99999999999999999999999999999999 777777777999999998886666 4789999999999999999988
Q ss_pred HHHHHHHHHHHHhh
Q 002275 817 SLLICFIQIFFSFI 830 (944)
Q Consensus 817 ~~~~~~~~~~~~~~ 830 (944)
|+.-.+..+...+.
T Consensus 576 ~~~~~~~i~~a~~~ 589 (673)
T PRK14010 576 DIAKYFAILPAMFM 589 (673)
T ss_pred cHHHHHHHHHHHHH
Confidence 88655554443333
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-74 Score=666.07 Aligned_cols=535 Identities=20% Similarity=0.204 Sum_probs=407.7
Q ss_pred HHHHHhhHHHHHHHHHHHHhhccccccc------ccccchh---hhHHHHHHHHHHHHHHHHHHhhh---hHHhcce-EE
Q 002275 37 LWEQFSRFMNQYFLLIACLQLWSLITPV------NPASTWG---PLIFIFAVSATKEAWDDYNRYLS---DKKANEK-EV 103 (944)
Q Consensus 37 l~~~f~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~---~l~~i~~i~~~~~~~~~~~~~~~---~~~~~~~-~~ 103 (944)
--.||++|+.+.+++.++++++..+.+. .+...|. .+++.+++..+.+.++++|.+++ ++++.+. ++
T Consensus 27 ~~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a 106 (679)
T PRK01122 27 PRVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFA 106 (679)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 4468899998888888888876543211 1122332 23333445666777888887765 4455554 79
Q ss_pred EEEECCe-EEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeeccccccCCCHhhhccc
Q 002275 104 WVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (944)
Q Consensus 104 ~V~r~g~-~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~ 182 (944)
+|+|||+ +++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+.
T Consensus 107 ~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vi-----eG~a~VDESaLTGES~PV~K~~G-------------- 167 (679)
T PRK01122 107 RKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI-----EGVASVDESAITGESAPVIRESG-------------- 167 (679)
T ss_pred EEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEE-----EccEEEEcccccCCCCceEeCCC--------------
Confidence 9999988 899999999999999999999999999999 67799999999999999999532
Q ss_pred eEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccCC---CCCCccc
Q 002275 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (944)
Q Consensus 183 ~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~ 259 (944)
+..+.+++||.+.+| ++.+.|+++|.+|.++++.. ..+.+++
T Consensus 168 ----------------------------------~~~~~V~aGT~v~~G-~~~i~Vta~g~~S~lgki~~lve~a~~~kt 212 (679)
T PRK01122 168 ----------------------------------GDFSSVTGGTRVLSD-WIVIRITANPGESFLDRMIALVEGAKRQKT 212 (679)
T ss_pred ----------------------------------CccCeEEeceEEEee-eEEEEEEEecccCHHHHHHHHHHhccccCC
Confidence 111239999999998 79999999999999998654 4455678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHH
Q 002275 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (944)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~ 339 (944)
|++...+.+...++.+.+++++..+.++ ||. +..+ .+.+. +.+++.++|++++..+..+.
T Consensus 213 p~e~al~~l~~~l~~i~l~~~~~~~~~~-----------~~~----g~~~--~l~~~---iallV~aiP~alg~l~~~i~ 272 (679)
T PRK01122 213 PNEIALTILLAGLTIIFLLVVATLPPFA-----------AYS----GGAL--SITVL---VALLVCLIPTTIGGLLSAIG 272 (679)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHH-----------HHh----CchH--HHHHH---HHHHHHcccchhhhHHHHHH
Confidence 9998888766555443333322222211 111 0111 22222 23677889998765554443
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCCCCCchhhhhh
Q 002275 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (944)
Q Consensus 340 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 419 (944)
..... +|.+. ++++|++.++|+||++|++|||||||||+|+|++++++..+.
T Consensus 273 i~g~~------r~ak~----gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------------ 324 (679)
T PRK01122 273 IAGMD------RVLQA----NVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG------------------ 324 (679)
T ss_pred HHHHH------HHhcC----CeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC------------------
Confidence 33332 44444 489999999999999999999999999999999998753210
Q ss_pred hcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHh-CCeEEEeecCcEEEEEECCeEEEEEEEEee
Q 002275 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ-LHMVLVNKNASILEIKFNGSVLQYEILETL 498 (944)
Q Consensus 420 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 498 (944)
.+..+++.+.++|+.. ..||..+|+++++++ .+... ....++..+.+
T Consensus 325 -----~~~~~ll~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--------------~~~~~~~~~~~ 372 (679)
T PRK01122 325 -----VTEEELADAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--------------RDLQSLHATFV 372 (679)
T ss_pred -----CCHHHHHHHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--------------hhhccccceeE
Confidence 0112455666666532 357999999999976 33210 01124456788
Q ss_pred cCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC--CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHH
Q 002275 499 EFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLM 576 (944)
Q Consensus 499 ~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~ 576 (944)
||++.+++|++.++ | ..+.||++|.+++.|... ..++++.+.+++++.+|+|++++|
T Consensus 373 pF~s~~~~~gv~~~----g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va--------------- 431 (679)
T PRK01122 373 PFSAQTRMSGVDLD----G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA--------------- 431 (679)
T ss_pred eecCcCceEEEEEC----C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------
Confidence 99999988887542 3 478999999999999642 234677888899999999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC
Q 002275 577 FKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656 (944)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~ 656 (944)
.|++++|+++++|++|+++++++++||++||+++|+|||+..+|.++|+++|+
T Consensus 432 -----------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI---- 484 (679)
T PRK01122 432 -----------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---- 484 (679)
T ss_pred -----------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC----
Confidence 46789999999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHH
Q 002275 657 PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL 736 (944)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 736 (944)
..+++|++|++|.++
T Consensus 485 -----------------------------------------------------------------d~v~A~~~PedK~~i 499 (679)
T PRK01122 485 -----------------------------------------------------------------DDFLAEATPEDKLAL 499 (679)
T ss_pred -----------------------------------------------------------------cEEEccCCHHHHHHH
Confidence 246889999999999
Q ss_pred HHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhh
Q 002275 737 VELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFY 815 (944)
Q Consensus 737 v~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~ 815 (944)
|+.+|+.|+.|+|+|||.||+|+|++||||||| |++.+.++++||+|+.++++.... .+.+||+..-.--.+..|++.
T Consensus 500 V~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 500 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 999999999999999999999999999999999 777777777999999998886665 478999988766566677766
Q ss_pred HHHH
Q 002275 816 KSLL 819 (944)
Q Consensus 816 ~~~~ 819 (944)
.-+.
T Consensus 579 n~~~ 582 (679)
T PRK01122 579 NDVA 582 (679)
T ss_pred HHHH
Confidence 4443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-71 Score=638.60 Aligned_cols=542 Identities=20% Similarity=0.224 Sum_probs=406.6
Q ss_pred HHHHHhhHHHHHHHHHHHHhhcccccc------cc---cccch--hhhHHHHHHHHHHHHHHHHHHhhhhHHh---cce-
Q 002275 37 LWEQFSRFMNQYFLLIACLQLWSLITP------VN---PASTW--GPLIFIFAVSATKEAWDDYNRYLSDKKA---NEK- 101 (944)
Q Consensus 37 l~~~f~~~~~~~~l~~~~~~~~~~~~~------~~---~~~~~--~~l~~i~~i~~~~~~~~~~~~~~~~~~~---~~~- 101 (944)
-..||++|+.+.+++.++++++..+.+ .. |+..+ ..+++.+++..+.+.++++|.+++.+++ .+.
T Consensus 26 ~~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~ 105 (675)
T TIGR01497 26 PKAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTT 105 (675)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 446889999877777888877654321 01 22111 1122234456677888888877765444 444
Q ss_pred EEEEEE-CCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeeccccccCCCHhhhc
Q 002275 102 EVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180 (944)
Q Consensus 102 ~~~V~r-~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~ 180 (944)
.++|+| ||++++|++++|+|||+|.+++||+|||||+++ +|.+.||||+|||||.|+.|.+.
T Consensus 106 ~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g------------ 168 (675)
T TIGR01497 106 FAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVI-----EGVASVDESAITGESAPVIKESG------------ 168 (675)
T ss_pred eEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EccEEEEcccccCCCCceeecCC------------
Confidence 588885 899999999999999999999999999999999 67799999999999999999531
Q ss_pred cceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccCC---CCCCc
Q 002275 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPK 257 (944)
Q Consensus 181 ~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~ 257 (944)
+....+++||.+.+| ++.+.|+++|.+|.++++.. ..+.+
T Consensus 169 ------------------------------------~~~~~V~aGT~v~~G-~~~i~Vt~~g~~S~lgri~~lve~a~~~ 211 (675)
T TIGR01497 169 ------------------------------------GDFASVTGGTRILSD-WLVVECTANPGETFLDRMIALVEGAQRR 211 (675)
T ss_pred ------------------------------------CCcceeecCcEEEee-EEEEEEEEecccCHHHHHHHHHHhcccC
Confidence 001139999999998 89999999999999998754 45556
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHHhccccceEEEeeHHH
Q 002275 258 LTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDL 337 (944)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~ 337 (944)
++|+|...+.+...+.++.++++++.+.+ ..| ....+ .+.+. +.+++.++|+++......
T Consensus 212 ktplq~~l~~l~~~l~~v~li~~~~~~~~-~~~--------------~~~~~--~~~~l---vallV~aiP~aLg~l~~a 271 (675)
T TIGR01497 212 KTPNEIALTILLIALTLVFLLVTATLWPF-AAY--------------GGNAI--SVTVL---VALLVCLIPTTIGGLLSA 271 (675)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh--------------cChhH--HHHHH---HHHHHHhCchhhhhHHHH
Confidence 78999887776654433322222111110 001 01111 11222 235677889965432222
Q ss_pred HHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCCCCCchhhh
Q 002275 338 VKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLL 417 (944)
Q Consensus 338 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 417 (944)
....+.. +|.+. ++++|++.++|+||++|++|||||||||+|+|++.+++..+
T Consensus 272 v~iag~~------r~ar~----gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~----------------- 324 (675)
T TIGR01497 272 IGIAGMD------RVLGF----NVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQ----------------- 324 (675)
T ss_pred HHHHHHH------HHHHC----CeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecC-----------------
Confidence 2112221 34333 48999999999999999999999999999999999876421
Q ss_pred hhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEe
Q 002275 418 NAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILET 497 (944)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 497 (944)
+.+..+++...++|+.. ..||.++|+++++++.|.... ...++..+.
T Consensus 325 ------~~~~~~ll~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~--------------~~~~~~~~~ 371 (675)
T TIGR01497 325 ------GVDEKTLADAAQLASLA-------------DDTPEGKSIVILAKQLGIRED--------------DVQSLHATF 371 (675)
T ss_pred ------CCcHHHHHHHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcc--------------ccccccceE
Confidence 01123455666666532 368999999999988664211 011234567
Q ss_pred ecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC--CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHH
Q 002275 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575 (944)
Q Consensus 498 ~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~ 575 (944)
.||++.++++++.+. +| ..+.||++|.+++.|... ..+.++.+.+++++.+|.|++++|
T Consensus 372 ~pf~~~~~~sg~~~~---~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va-------------- 432 (675)
T TIGR01497 372 VEFTAQTRMSGINLD---NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC-------------- 432 (675)
T ss_pred EEEcCCCcEEEEEEe---CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEE--------------
Confidence 899999887776543 23 468999999999888532 234678888999999999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC
Q 002275 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (944)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~ 655 (944)
.+.+++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++|+
T Consensus 433 ------------------------~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI--- 485 (675)
T TIGR01497 433 ------------------------EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--- 485 (675)
T ss_pred ------------------------ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC---
Confidence 35689999999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHH
Q 002275 656 EPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQ 735 (944)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 735 (944)
..++++++|++|.+
T Consensus 486 ------------------------------------------------------------------~~v~a~~~PedK~~ 499 (675)
T TIGR01497 486 ------------------------------------------------------------------DDFIAEATPEDKIA 499 (675)
T ss_pred ------------------------------------------------------------------CEEEcCCCHHHHHH
Confidence 24678999999999
Q ss_pred HHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhh
Q 002275 736 LVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSF 814 (944)
Q Consensus 736 iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~ 814 (944)
+++.+|+.|+.|+|+|||.||+|||+.||+|||| +++.+.++++||+++.++++.... .+.+||+++-+...+..|++
T Consensus 500 ~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~ 578 (675)
T TIGR01497 500 LIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSI 578 (675)
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeee
Confidence 9999999999999999999999999999999999 777777888999999998886655 47899999998888888888
Q ss_pred hHHHHHHHHHH
Q 002275 815 YKSLLICFIQI 825 (944)
Q Consensus 815 ~~~~~~~~~~~ 825 (944)
...+.-+|..+
T Consensus 579 ~~~~~~~~~~~ 589 (675)
T TIGR01497 579 ANDVAKYFAII 589 (675)
T ss_pred cccHHHHHHHH
Confidence 77665554433
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-69 Score=590.29 Aligned_cols=782 Identities=19% Similarity=0.213 Sum_probs=505.3
Q ss_pred cCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHHHhhhh
Q 002275 16 LYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSD 95 (944)
Q Consensus 16 ~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~~~~~~~ 95 (944)
+||+|+.....+++- .+|.+.-..|+..|..+...+++ . ...|+++++.+++++.+-+.. .+|..+.....
T Consensus 175 ~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWC--L--DeyWYySlFtLfMli~fE~tl-V~Qrm~~lse~ 245 (1160)
T KOG0209|consen 175 KYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWC--L--DEYWYYSLFTLFMLIAFEATL-VKQRMRTLSEF 245 (1160)
T ss_pred HhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHH--h--HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 499999999998876 67777777777444333333333 2 122344445555555543321 23333334444
Q ss_pred HHh--cceEEEEEECCeEEEEeeccCccccEEEEec---CccccccEEEEeccCCCceEEEEeccccCCCCceeeecccc
Q 002275 96 KKA--NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRE---NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAA 170 (944)
Q Consensus 96 ~~~--~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~---G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~ 170 (944)
+.+ .+..+.|+|+++|+.+.++||.|||+|.|.. ...||||.+|| +|+|.||||+|||||.|..|.++..
T Consensus 246 R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL-----~GsciVnEaMLtGESvPl~KE~Ie~ 320 (1160)
T KOG0209|consen 246 RTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL-----RGSCIVNEAMLTGESVPLMKESIEL 320 (1160)
T ss_pred HhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE-----ecceeechhhhcCCCcccccccccc
Confidence 444 4567899999999999999999999999988 56899999999 8999999999999999999977542
Q ss_pred ccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeec-------------CceEEEE
Q 002275 171 CMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN-------------TEWACGV 237 (944)
Q Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~-------------g~~~~~~ 237 (944)
-. .+.... ....++...+|.||++.+ | -+.+.
T Consensus 321 ~~---~d~~ld-------------------------------~~~d~k~hVlfGGTkivQht~p~~~slk~pDg-gc~a~ 365 (1160)
T KOG0209|consen 321 RD---SDDILD-------------------------------IDRDDKLHVLFGGTKIVQHTPPKKASLKTPDG-GCVAY 365 (1160)
T ss_pred CC---hhhhcc-------------------------------cccccceEEEEcCceEEEecCCccccccCCCC-CeEEE
Confidence 11 000000 000134457888888753 4 48999
Q ss_pred EEEecCCceeeccCCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhH
Q 002275 238 AVYTGNETKLGMTRGIP---EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV 314 (944)
Q Consensus 238 V~~tG~~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (944)
|++||.+|..|+..+.. ..+-+ ..|+=+.+++.+.++++++.. ++.|... ...+...--.
T Consensus 366 VlrTGFeTSQGkLvRtilf~aervT----aNn~Etf~FILFLlVFAiaAa--~Yvwv~G-----------skd~~RsrYK 428 (1160)
T KOG0209|consen 366 VLRTGFETSQGKLVRTILFSAERVT----ANNRETFIFILFLLVFAIAAA--GYVWVEG-----------SKDPTRSRYK 428 (1160)
T ss_pred EEeccccccCCceeeeEEecceeee----eccHHHHHHHHHHHHHHHHhh--heEEEec-----------ccCcchhhhh
Confidence 99999999999876531 11111 111222223333333333322 2233221 1111122223
Q ss_pred hHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEE
Q 002275 315 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 394 (944)
Q Consensus 315 ~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~ 394 (944)
.++.|.+++...+|.-||+.+++|-..... .+ .+.++.+..+--+.-.|+||+.|||||||||+..|.|.
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~------AL----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLI------AL----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHH------HH----HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 335677788999999999888887544322 11 12246677777778899999999999999999999999
Q ss_pred EEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEE
Q 002275 395 RCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474 (944)
Q Consensus 395 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~ 474 (944)
++.-... ++. . ... .+....+-+.+++.||+.....++ -.|||.|+|.+++. |+.+.
T Consensus 499 Gvag~~~----~~~-~------~~~---~s~~p~~t~~vlAscHsLv~le~~------lVGDPlEKA~l~~v---~W~~~ 555 (1160)
T KOG0209|consen 499 GVAGLSA----DEG-A------LTP---ASKAPNETVLVLASCHSLVLLEDK------LVGDPLEKATLEAV---GWNLE 555 (1160)
T ss_pred ecccccC----Ccc-c------ccc---hhhCCchHHHHHHHHHHHHHhcCc------ccCChHHHHHHHhc---Ccccc
Confidence 8753111 000 0 000 111122456789999997765433 25999999998765 44433
Q ss_pred eecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCC---CcEEEEecCchhhcccccccCCchhHHHHHHHHHH
Q 002275 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS---GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551 (944)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~---~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~ 551 (944)
..+.. ..-.+.....++.+.+.|+|..|||+|+++.... -++++.+|||||.|..+..+ .+.++++...+|+
T Consensus 556 k~~~v---~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--vP~dY~~iYk~yt 630 (1160)
T KOG0209|consen 556 KKNSV---CPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--VPKDYDEIYKRYT 630 (1160)
T ss_pred cCccc---CCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--CchhHHHHHHHHh
Confidence 22211 0112223357788999999999999999987432 35899999999999988763 4788999999999
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCe
Q 002275 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631 (944)
Q Consensus 552 ~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~ 631 (944)
.+|.||+|+|||.+..-..++ .-+.-++.+|+||+|.|++.|.-|++++++++|+.|++++|+
T Consensus 631 R~GsRVLALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~ 693 (1160)
T KOG0209|consen 631 RQGSRVLALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHR 693 (1160)
T ss_pred hccceEEEEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCce
Confidence 999999999999987422111 111234689999999999999999999999999999999999
Q ss_pred EEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHH--HHHHHHHHHHHHhhcccC-----CCCcEEEEEcchhHHH
Q 002275 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED--EVCRSLERVLLTMRITTS-----EPKDVAFVVDGWALEI 704 (944)
Q Consensus 632 v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~lv~~~~~~~~ 704 (944)
++|+|||++.||.++|+++|+...... +....+..-. -.+...+... .+..... -...+.++++|..++.
T Consensus 694 vvMITGDnpLTAchVak~v~iv~k~~~--vl~~~~~~~~~~~~w~s~d~t~-~lp~~p~~~~~~l~~~~dlcitG~~l~~ 770 (1160)
T KOG0209|consen 694 VVMITGDNPLTACHVAKEVGIVEKPTL--VLDLPEEGDGNQLEWVSVDGTI-VLPLKPGKKKTLLAETHDLCITGSALDH 770 (1160)
T ss_pred EEEEeCCCccchheehheeeeeccCce--eeccCccCCCceeeEecCCCce-eecCCCCccchhhhhhhhhhcchhHHHH
Confidence 999999999999999999998765221 1111110000 0000000000 0000000 0122345678887776
Q ss_pred HHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHH-------
Q 002275 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA------- 777 (944)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~------- 777 (944)
+...- .. ........+|+|+.|+||..++..+++.|..++|+|||.||+.+||+||||||.-.|..+..
T Consensus 771 l~~~~--~l--~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~ 846 (1160)
T KOG0209|consen 771 LQATD--QL--RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRR 846 (1160)
T ss_pred HhhhH--HH--HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhh
Confidence 65432 11 12234578999999999999999999999999999999999999999999999733322100
Q ss_pred ---------------------------------------------------------------hhhCcEeec--cccchh
Q 002275 778 ---------------------------------------------------------------ARAADYSIG--KFRFLK 792 (944)
Q Consensus 778 ---------------------------------------------------------------k~~Ad~v~~--~~~~l~ 792 (944)
.-+|.+... +-..+.
T Consensus 847 ~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~ 926 (1160)
T KOG0209|consen 847 KKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVT 926 (1160)
T ss_pred hhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHH
Confidence 001111111 011122
Q ss_pred HHHhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhc
Q 002275 793 RLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQ 872 (944)
Q Consensus 793 ~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (944)
+ +++.||+..-+. .+.||-+.++...-.|.....+..--=|+..|...-.+++ .+.++...+..|-+.+-+
T Consensus 927 ~-IIrQGRctLVtT-----lQMfKILALN~LisAYslSvlyldGVKfgD~QaTisGlLl---a~cFlfISrskPLetLSk 997 (1160)
T KOG0209|consen 927 H-IIRQGRCTLVTT-----LQMFKILALNCLISAYSLSVLYLDGVKFGDTQATISGLLL---AACFLFISRSKPLETLSK 997 (1160)
T ss_pred H-HHHhcchhHHHH-----HHHHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHHHHH---HHHHhheecCCchhhHhh
Confidence 2 468899988877 3445555555554455444433322336777766544332 333444555567666654
Q ss_pred -CCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccCc----------chhhhhHHHHHHHHHHHHHhhhe
Q 002275 873 -HPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKS----------EMEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 873 -~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
+|. ..+||..++...++|-+.|...+++++--++..... .++-+++..|..+...|.-++++
T Consensus 998 eRP~-------~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAV 1070 (1160)
T KOG0209|consen 998 ERPL-------PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAV 1070 (1160)
T ss_pred cCCC-------CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhh
Confidence 443 468999998888888888888888887766655321 23456677777777777766654
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-70 Score=581.08 Aligned_cols=599 Identities=18% Similarity=0.211 Sum_probs=439.7
Q ss_pred CccccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccc--cccchhhhHHHHHHHHHHHHHH
Q 002275 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTWGPLIFIFAVSATKEAWD 87 (944)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~l~~i~~i~~~~~~~~ 87 (944)
.++|++.||.|+++.+|.+.+ +.|+.-|..|..+..-.++++.....-.... .|..+..++..+++++.+.+++
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~Fve 117 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeee
Confidence 358999999999999887755 5667777888876655666555432111111 1223455666677788889999
Q ss_pred HHHHhh---hhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCcee
Q 002275 88 DYNRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164 (944)
Q Consensus 88 ~~~~~~---~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~ 164 (944)
|+++-. ++++-...++.|+|||+|.+++++.|||||||.++.|++||||++||+.. .+.||+|.|||||.|++
T Consensus 118 E~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLpvt 193 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLPVT 193 (942)
T ss_pred ccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccccc
Confidence 998754 35555677889999999999999999999999999999999999999755 39999999999999999
Q ss_pred eeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCC
Q 002275 165 RLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244 (944)
Q Consensus 165 K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~ 244 (944)
| ..++.+|+||.+++|+ +.++|++||.+
T Consensus 194 K---------------------------------------------------h~gd~vfSgSTcKqGE-~eaVViATg~~ 221 (942)
T KOG0205|consen 194 K---------------------------------------------------HPGDEVFSGSTCKQGE-IEAVVIATGVH 221 (942)
T ss_pred c---------------------------------------------------CCCCceecccccccce-EEEEEEEeccc
Confidence 9 4567899999999995 99999999999
Q ss_pred ceeeccCC--CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHH
Q 002275 245 TKLGMTRG--IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (944)
Q Consensus 245 T~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (944)
|..|+-+. .......++++.++-+..+.++..++ .+++.+.. . ||. ....+..... ....+
T Consensus 222 TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~-g~lie~~v-m---------y~~----q~R~~r~~i~--nLlvl 284 (942)
T KOG0205|consen 222 TFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIAL-GMLIEITV-M---------YPI----QHRLYRDGID--NLLVL 284 (942)
T ss_pred eeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHH-HHHHHHHh-h---------hhh----hhhhhhhhhh--hehee
Confidence 99998665 33566788999988876654333222 11111110 0 110 0111111110 11113
Q ss_pred hccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEE--E--EE
Q 002275 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR--C--CI 398 (944)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~--i--~~ 398 (944)
+..-+|+++|..++....+++-+ +. +++..+++..++|+|+.++++|+|||||||.|++.+.+ + +.
T Consensus 285 lIGgiPiamPtVlsvTMAiGs~r------La----qqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v 354 (942)
T KOG0205|consen 285 LIGGIPIAMPTVLSVTMAIGSHR------LS----QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFV 354 (942)
T ss_pred eecccccccceeeeehhhHHHHH------HH----hcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeee
Confidence 44458888875444333333332 22 23467899999999999999999999999999999876 2 22
Q ss_pred cCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecC
Q 002275 399 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478 (944)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~ 478 (944)
.+ -+++...++.|.+ + . ....|..|.|++...++-
T Consensus 355 ~g----------------------v~~D~~~L~A~rA--s--r----------~en~DAID~A~v~~L~dP--------- 389 (942)
T KOG0205|consen 355 KG----------------------VDKDDVLLTAARA--S--R----------KENQDAIDAAIVGMLADP--------- 389 (942)
T ss_pred cC----------------------CChHHHHHHHHHH--h--h----------hcChhhHHHHHHHhhcCH---------
Confidence 11 2233223333322 2 1 124688899999877541
Q ss_pred cEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhccccccc-CCchhHHHHHHHHHHhccceE
Q 002275 479 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-GQQTRTFVEAVEQYSQLGLRT 557 (944)
Q Consensus 479 ~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~G~rv 557 (944)
.+.+..|+.++.+||++..||....+.++ +|+.+..+||||+.|++.|+. .+.++++.+.+++|+.+|+|-
T Consensus 390 -------Keara~ikevhF~PFnPV~Krta~ty~d~-dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRS 461 (942)
T KOG0205|consen 390 -------KEARAGIKEVHFLPFNPVDKRTALTYIDP-DGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRS 461 (942)
T ss_pred -------HHHhhCceEEeeccCCccccceEEEEECC-CCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchh
Confidence 12356788999999999999999999997 688899999999999999975 455788999999999999999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcC
Q 002275 558 LCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTG 637 (944)
Q Consensus 558 l~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TG 637 (944)
+++|++..++... +.-...+.|+|+.-+.||+|.++.++|++....|+.|.|+||
T Consensus 462 LgVArq~v~e~~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmitg 516 (942)
T KOG0205|consen 462 LAVARQEVPEKTK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (942)
T ss_pred hhhhhhccccccc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecc
Confidence 9999998776431 122367899999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHcCCCCCCCCC-eEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhh
Q 002275 638 DKQNTAIQIALSCNFISPEPKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716 (944)
Q Consensus 638 d~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~ 716 (944)
|...-+...++.+|+-.+..++ .....++... +.+....
T Consensus 517 dqlaI~keTgrrlgmgtnmypss~llG~~~~~~---------------------------~~~~~v~------------- 556 (942)
T KOG0205|consen 517 DQLAIAKETGRRLGMGTNMYPSSALLGLGKDGS---------------------------MPGSPVD------------- 556 (942)
T ss_pred hHHHHHHhhhhhhccccCcCCchhhccCCCCCC---------------------------CCCCcHH-------------
Confidence 9999999999999885543221 1111110000 0000000
Q ss_pred hhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-H
Q 002275 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-I 795 (944)
Q Consensus 717 ~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~ 795 (944)
....+.+-|+.+.|++|.++|+.||+.++.+.|.|||+||+|+|+.||+|||+ ..+.+.+..+||+|++......++ .
T Consensus 557 elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav-a~atdaar~asdiVltepglSviI~a 635 (942)
T KOG0205|consen 557 ELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARSASDIVLTEPGLSVIISA 635 (942)
T ss_pred HHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee-ccchhhhcccccEEEcCCCchhhHHH
Confidence 01233677899999999999999999999999999999999999999999999 666655555899999987776555 4
Q ss_pred hhhhhhhhhhhhhhHHhhh
Q 002275 796 LVHGRYSYNRTAFLSQYSF 814 (944)
Q Consensus 796 l~~gr~~~~~~~~~~~~~~ 814 (944)
+..+|.+|+|.+....|.+
T Consensus 636 vltSraIfqrmknytiyav 654 (942)
T KOG0205|consen 636 VLTSRAIFQRMKNYTIYAV 654 (942)
T ss_pred HHHHHHHHHHHhhheeeee
Confidence 6789999999976665554
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-65 Score=583.77 Aligned_cols=490 Identities=20% Similarity=0.216 Sum_probs=374.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhh------hHHhcceEEEEEE-CCeEEEEeeccCccccEEEEecCccccccEEEEeccCCC
Q 002275 74 IFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (944)
Q Consensus 74 ~~i~~i~~~~~~~~~~~~~~~------~~~~~~~~~~V~r-~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~ 146 (944)
.+++++..+.++++++.+.++ +.++.|+++++++ ||++++||.++|+|||+|.|+|||+||+||+++ +
T Consensus 178 a~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~-----~ 252 (713)
T COG2217 178 AMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV-----S 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-----e
Confidence 344444455566666655443 4556789998877 555999999999999999999999999999999 8
Q ss_pred ceEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecc
Q 002275 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (944)
Q Consensus 147 g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt 226 (944)
|...||||+|||||.|+.| ..++.+++||
T Consensus 253 G~s~vDeS~iTGEs~PV~k---------------------------------------------------~~Gd~V~aGt 281 (713)
T COG2217 253 GSSSVDESMLTGESLPVEK---------------------------------------------------KPGDEVFAGT 281 (713)
T ss_pred CcEEeecchhhCCCCCEec---------------------------------------------------CCCCEEeeeE
Confidence 8899999999999999999 5678999999
Q ss_pred eeecCceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeec
Q 002275 227 YLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (944)
Q Consensus 227 ~~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (944)
.+.+| .....|+++|.+|.++++.+ .++.+++|.|+..|+++.++.+..++++++.+++|.++..
T Consensus 282 iN~~G-~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~----------- 349 (713)
T COG2217 282 VNLDG-SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG----------- 349 (713)
T ss_pred EECCc-cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----------
Confidence 99999 79999999999999998755 6777889999999999999999888888887775433221
Q ss_pred CCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCc
Q 002275 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (944)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKT 383 (944)
.+|...+..+++ +++.++||+|-.+...+.....- + ..+.++++|++.++|.++++|+++||||
T Consensus 350 ---~~~~~a~~~a~a---vLVIaCPCALgLAtP~ai~~g~g------~----aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 350 ---GDWETALYRALA---VLVIACPCALGLATPTAILVGIG------R----AARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred ---CcHHHHHHHHHh---heeeeCccHHHhHHHHHHHHHHH------H----HHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 123333333222 45555565553322222222111 0 1235699999999999999999999999
Q ss_pred CcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHH
Q 002275 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (944)
Q Consensus 384 GTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all 463 (944)
||||+|+|+|.++...+. +..+++...+.- +..+.||..+|++
T Consensus 414 GTLT~G~p~v~~v~~~~~------------------------~e~~~L~laAal-------------E~~S~HPiA~AIv 456 (713)
T COG2217 414 GTLTEGKPEVTDVVALDG------------------------DEDELLALAAAL-------------EQHSEHPLAKAIV 456 (713)
T ss_pred CCCcCCceEEEEEecCCC------------------------CHHHHHHHHHHH-------------HhcCCChHHHHHH
Confidence 999999999999865321 111222222211 1346899999999
Q ss_pred HHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHH
Q 002275 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (944)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (944)
++++..|... ... .+.+| .+.....+ +| ..+.-|++..+.+.-.+. ...
T Consensus 457 ~~a~~~~~~~---------------~~~---~~~i~----G~Gv~~~v----~g--~~v~vG~~~~~~~~~~~~---~~~ 505 (713)
T COG2217 457 KAAAERGLPD---------------VED---FEEIP----GRGVEAEV----DG--ERVLVGNARLLGEEGIDL---PLL 505 (713)
T ss_pred HHHHhcCCCC---------------ccc---eeeec----cCcEEEEE----CC--EEEEEcCHHHHhhcCCCc---cch
Confidence 9998766210 000 11111 11111111 23 345558877665432111 115
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHH
Q 002275 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (944)
Q Consensus 544 ~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~ 623 (944)
.+..+.+..+|..++.++ .|.+++|+++++|++|++++++|+
T Consensus 506 ~~~~~~~~~~G~t~v~va--------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~ 547 (713)
T COG2217 506 SERIEALESEGKTVVFVA--------------------------------------VDGKLVGVIALADELRPDAKEAIA 547 (713)
T ss_pred hhhHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEEeCCCChhHHHHHH
Confidence 567888899999988888 677999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHH
Q 002275 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (944)
Q Consensus 624 ~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~ 703 (944)
+||+.|+++.|+|||+..+|..+|+++||
T Consensus 548 ~L~~~Gi~~~mLTGDn~~~A~~iA~~lGI--------------------------------------------------- 576 (713)
T COG2217 548 ALKALGIKVVMLTGDNRRTAEAIAKELGI--------------------------------------------------- 576 (713)
T ss_pred HHHHCCCeEEEEcCCCHHHHHHHHHHcCh---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcE
Q 002275 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (944)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~ 783 (944)
..+++++.|++|.++|+.|++.|+.|+|+|||.||+|+|..||||||| |.+.+-+.++||+
T Consensus 577 ------------------d~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm-G~GtDvA~eaADv 637 (713)
T COG2217 577 ------------------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM-GSGTDVAIEAADV 637 (713)
T ss_pred ------------------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee-cCCcHHHHHhCCE
Confidence 346788999999999999999999999999999999999999999999 7777777779999
Q ss_pred eeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHH
Q 002275 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (944)
Q Consensus 784 v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (944)
++.+++..... .+..+|.+..++++++.|.+.+|.+...+
T Consensus 638 vL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ipl 678 (713)
T COG2217 638 VLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPL 678 (713)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998775544 46789999999999999999888865443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-64 Score=580.14 Aligned_cols=468 Identities=30% Similarity=0.391 Sum_probs=377.4
Q ss_pred HHHHHHHHHHHHHHHhhh---hHH--hcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEE
Q 002275 77 FAVSATKEAWDDYNRYLS---DKK--ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYV 151 (944)
Q Consensus 77 ~~i~~~~~~~~~~~~~~~---~~~--~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~V 151 (944)
+++..+.+.+++++..+. .++ +++++++|+|+| +++|++++|+|||+|.+++||+|||||+++ +|.+.|
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl-----~g~~~v 79 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL-----SGSCFV 79 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE-----EccEEE
Confidence 334444555555554332 333 788899999999 999999999999999999999999999999 677999
Q ss_pred EeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecC
Q 002275 152 ETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT 231 (944)
Q Consensus 152 des~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g 231 (944)
|||+|||||.|+.|. .++.+++|+.+.+|
T Consensus 80 des~LTGEs~pv~k~---------------------------------------------------~g~~v~~gs~~~~G 108 (499)
T TIGR01494 80 DESNLTGESVPVLKT---------------------------------------------------AGDAVFAGTYVFNG 108 (499)
T ss_pred EcccccCCCCCeeec---------------------------------------------------cCCccccCcEEecc
Confidence 999999999999993 34578999999998
Q ss_pred ceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCc
Q 002275 232 EWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLT-GAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEF 307 (944)
Q Consensus 232 ~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (944)
.....|..+|.+|..+++.. .....++++++..+++. .++.++.++++++.++++..+.. ...
T Consensus 109 -~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~------------~~~ 175 (499)
T TIGR01494 109 -TLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLW------------DPN 175 (499)
T ss_pred -EEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------ccc
Confidence 68999999999998887543 33444688899999988 66666666655555554322110 000
Q ss_pred chhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCccc
Q 002275 308 PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLT 387 (944)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT 387 (944)
.|...+ ..++.+++.++|++|++++.++...+.. ++.+. ++++|+++++|+||+++++|||||||||
T Consensus 176 ~~~~~~---~~~~~vl~~~~P~aL~~~~~~~~~~~~~------~~~~~----gilvk~~~~lE~l~~v~~i~fDKTGTLT 242 (499)
T TIGR01494 176 SIFKIF---LRALILLVIAIPIALPLAVTIALAVGDA------RLAKK----GIVVRSLNALEELGKVDYICSDKTGTLT 242 (499)
T ss_pred cHHHHH---HHHHHHHHHhcCCcHHHHHHHHHHHHHH------HHHHC----CcEEechhhhhhccCCcEEEeeCCCccc
Confidence 233333 3444588889999999988888877654 44443 5889999999999999999999999999
Q ss_pred ccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHH
Q 002275 388 ENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAA 467 (944)
Q Consensus 388 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~ 467 (944)
+|+|++++++..+. ++.++||.|.|++++++
T Consensus 243 ~~~~~v~~~~~~~~-------------------------------------------------~~~s~hp~~~ai~~~~~ 273 (499)
T TIGR01494 243 KNEMSFKKVSVLGG-------------------------------------------------EYLSGHPDERALVKSAK 273 (499)
T ss_pred cCceEEEEEEecCC-------------------------------------------------CcCCCChHHHHHHHHhh
Confidence 99999999865321 02358999999999886
Q ss_pred hCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHHHHHH
Q 002275 468 QLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAV 547 (944)
Q Consensus 468 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~ 547 (944)
..+ +...||++.+++|+++++.. ++ .|+||+++.+.+.|.. +.+.+
T Consensus 274 ~~~------------------------~~~~~f~~~~~~~~~~~~~~-~~---~~~~G~~~~i~~~~~~------~~~~~ 319 (499)
T TIGR01494 274 WKI------------------------LNVFEFSSVRKRMSVIVRGP-DG---TYVKGAPEFVLSRVKD------LEEKV 319 (499)
T ss_pred hcC------------------------cceeccCCCCceEEEEEecC-Cc---EEEeCCHHHHHHhhHH------HHHHH
Confidence 411 24579999999999999863 22 4789999999988742 44556
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHH
Q 002275 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (944)
Q Consensus 548 ~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~ 627 (944)
++++.+|+|++++|++ .+++|+++++|++|++++++|+.|++
T Consensus 320 ~~~~~~g~~~~~~a~~--------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~ 361 (499)
T TIGR01494 320 KELAQSGLRVLAVASK--------------------------------------ETLLGLLGLEDPLRDDAKETISELRE 361 (499)
T ss_pred HHHHhCCCEEEEEEEC--------------------------------------CeEEEEEEecCCCchhHHHHHHHHHH
Confidence 6788999999999953 36999999999999999999999999
Q ss_pred cCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHH
Q 002275 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (944)
Q Consensus 628 ~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~ 707 (944)
+|++++|+|||+..++..+|+++|+
T Consensus 362 ~gi~~~~ltGD~~~~a~~ia~~lgi------------------------------------------------------- 386 (499)
T TIGR01494 362 AGIRVIMLTGDNVLTAKAIAKELGI------------------------------------------------------- 386 (499)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHcCc-------------------------------------------------------
Confidence 9999999999999999999999985
Q ss_pred HHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeecc
Q 002275 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (944)
Q Consensus 708 ~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~ 787 (944)
+++++|++|.++++.+++.|+.|+|+|||.||++||+.||+|||| + ++++||+++.+
T Consensus 387 -----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~-~-----a~~~adivl~~ 443 (499)
T TIGR01494 387 -----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAM-G-----AKAAADIVLLD 443 (499)
T ss_pred -----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcccc-c-----hHHhCCeEEec
Confidence 246799999999999999999999999999999999999999999 5 57789999998
Q ss_pred ccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHH
Q 002275 788 FRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826 (944)
Q Consensus 788 ~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (944)
++..... ++.+||+++.++++++.|.+++|+......++
T Consensus 444 ~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 444 DNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6664433 57899999999999999999999875554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-62 Score=584.34 Aligned_cols=479 Identities=18% Similarity=0.201 Sum_probs=367.2
Q ss_pred HHHHHHHHHHHHHHHHhhh---hHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEE
Q 002275 76 IFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (944)
Q Consensus 76 i~~i~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vd 152 (944)
++.+...++.+.+.|..+. +.++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+++ +|.+.||
T Consensus 215 l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi-----~g~~~vd 289 (741)
T PRK11033 215 LFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL-----SPFASFD 289 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE-----ECcEEee
Confidence 3334445555555555443 4556788999999999999999999999999999999999999999 6779999
Q ss_pred eccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCc
Q 002275 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (944)
Q Consensus 153 es~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~ 232 (944)
||+|||||.|+.| ..++.+++||.+.+|
T Consensus 290 es~lTGEs~Pv~k---------------------------------------------------~~Gd~V~aGt~~~~G- 317 (741)
T PRK11033 290 ESALTGESIPVER---------------------------------------------------ATGEKVPAGATSVDR- 317 (741)
T ss_pred cccccCCCCCEec---------------------------------------------------CCCCeeccCCEEcCc-
Confidence 9999999999999 456789999999999
Q ss_pred eEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcch
Q 002275 233 WACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPW 309 (944)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (944)
.+.+.|+++|.+|.++++.+ ..+.+++|+++.+++++.++.++.++++++.++++..+.. .+|
T Consensus 318 ~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~--------------~~~ 383 (741)
T PRK11033 318 LVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFA--------------APW 383 (741)
T ss_pred eEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------CCH
Confidence 79999999999999998764 5566789999999999999999888888877776532211 122
Q ss_pred hhhhHhHHHHHHHhccccceEEE----eeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCc
Q 002275 310 YELLVIPLRFELLCSIMIPISIK----VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (944)
Q Consensus 310 ~~~~~~~~~~~~~~~~~iP~~l~----v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGT 385 (944)
...+..+++ +++.++|++|. +++..+....+ ++++++|++.++|.|+++++||||||||
T Consensus 384 ~~~i~~a~s---vlviacPcaL~latP~a~~~~l~~aa--------------r~gilik~~~alE~l~~v~~v~fDKTGT 446 (741)
T PRK11033 384 QEWIYRGLT---LLLIGCPCALVISTPAAITSGLAAAA--------------RRGALIKGGAALEQLGRVTTVAFDKTGT 446 (741)
T ss_pred HHHHHHHHH---HHHHhchhhhhhhhHHHHHHHHHHHH--------------HCCeEEcCcHHHHHhhCCCEEEEeCCCC
Confidence 222222222 44555666663 22222222222 2368999999999999999999999999
Q ss_pred ccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHH
Q 002275 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (944)
Q Consensus 386 LT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~ 465 (944)
||+|+|+|.++...+.. + ..+++...+... ..+.||.++|++++
T Consensus 447 LT~g~~~v~~~~~~~~~---------------------~--~~~~l~~aa~~e-------------~~s~hPia~Ai~~~ 490 (741)
T PRK11033 447 LTEGKPQVTDIHPATGI---------------------S--ESELLALAAAVE-------------QGSTHPLAQAIVRE 490 (741)
T ss_pred CcCCceEEEEEEecCCC---------------------C--HHHHHHHHHHHh-------------cCCCCHHHHHHHHH
Confidence 99999999998642210 0 112222222111 22579999999999
Q ss_pred HHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeE-EEEEecCCCcEEEEecCchhhcccccccCCchhHHH
Q 002275 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS-VVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (944)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~s-viv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (944)
+++.+.. +||.++++.+. .-++..-+|+. +.-|+++.+.+ ..+++.
T Consensus 491 a~~~~~~-------------------------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~------~~~~~~ 537 (741)
T PRK11033 491 AQVRGLA-------------------------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP------LADAFA 537 (741)
T ss_pred HHhcCCC-------------------------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh------ccHHHH
Confidence 9875532 23444444432 11221113333 33478877654 124566
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHH
Q 002275 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (944)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~ 624 (944)
+.++++..+|.|++++| .|.+++|+++++|++|++++++|++
T Consensus 538 ~~~~~~~~~g~~~v~va--------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~ 579 (741)
T PRK11033 538 GQINELESAGKTVVLVL--------------------------------------RNDDVLGLIALQDTLRADARQAISE 579 (741)
T ss_pred HHHHHHHhCCCEEEEEE--------------------------------------ECCEEEEEEEEecCCchhHHHHHHH
Confidence 67788999999999999 4678999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHH
Q 002275 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (944)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~ 704 (944)
|++.|++++|+|||+..++..+|+++|+.
T Consensus 580 L~~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------------------------------- 608 (741)
T PRK11033 580 LKALGIKGVMLTGDNPRAAAAIAGELGID--------------------------------------------------- 608 (741)
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------------------------------
Confidence 99999999999999999999999999982
Q ss_pred HHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEe
Q 002275 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (944)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v 784 (944)
.++++.|++|..+++.+++. +.|+|+|||.||+|||+.||+|||| |++.+.++++||++
T Consensus 609 -------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~adiv 667 (741)
T PRK11033 609 -------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETADAA 667 (741)
T ss_pred -------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhCCEE
Confidence 12356899999999999965 5799999999999999999999999 78777788899999
Q ss_pred eccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHH
Q 002275 785 IGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (944)
Q Consensus 785 ~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~ 821 (944)
+.+++..... ++..||.++.++++++.|.+.+|.++.
T Consensus 668 l~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i 705 (741)
T PRK11033 668 LTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFL 705 (741)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887664433 468999999999999999988876543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-62 Score=546.01 Aligned_cols=500 Identities=19% Similarity=0.216 Sum_probs=388.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh---hhHHhcceEEEEEECCe-EEEEeeccCccccEEEEecCccccccEEEEeccCCCc
Q 002275 72 PLIFIFAVSATKEAWDDYNRYL---SDKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (944)
Q Consensus 72 ~l~~i~~i~~~~~~~~~~~~~~---~~~~~~~~~~~V~r~g~-~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g 147 (944)
.++.++.+.-.+|.....+... .+.++.|.++.++.+|+ .++|+.+.|++||+|.|.||++||+||+++ +|
T Consensus 346 MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv-----~G 420 (951)
T KOG0207|consen 346 MLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV-----DG 420 (951)
T ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE-----eC
Confidence 3343444444444444433322 35567889999999997 899999999999999999999999999999 88
Q ss_pred eEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecce
Q 002275 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (944)
Q Consensus 148 ~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~ 227 (944)
+++||||.+|||+.|+.| ..++.+.+||.
T Consensus 421 ss~VDEs~iTGEs~PV~K---------------------------------------------------k~gs~ViaGsi 449 (951)
T KOG0207|consen 421 SSEVDESLITGESMPVPK---------------------------------------------------KKGSTVIAGSI 449 (951)
T ss_pred ceeechhhccCCceeccc---------------------------------------------------CCCCeeeeeee
Confidence 899999999999999999 45779999999
Q ss_pred eecCceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccc--ceeee
Q 002275 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--QWYVL 302 (944)
Q Consensus 228 ~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~ 302 (944)
+.+| ..+..++++|.||.++++.+ .++..+.|+|+.+|+++.++.++.++++++.+++|.++....... .|.
T Consensus 450 N~nG-~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~-- 526 (951)
T KOG0207|consen 450 NLNG-TLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFF-- 526 (951)
T ss_pred cCCc-eEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhh--
Confidence 9999 89999999999999998765 667788999999999999999999999988888876654321111 111
Q ss_pred cCCCcch-----hhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEE
Q 002275 303 YPQEFPW-----YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEY 377 (944)
Q Consensus 303 ~~~~~~~-----~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~ 377 (944)
..+ ..+.++.+.|||.+..+.|.+..+..+.+.. +|+++|..+++|.+.++++
T Consensus 527 ----~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~------------------nGvLIKGge~LE~~hkv~t 584 (951)
T KOG0207|consen 527 ----DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGAT------------------NGVLIKGGEALEKAHKVKT 584 (951)
T ss_pred ----HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhh------------------cceEEcCcHHHHHHhcCCE
Confidence 111 1222234557777777777777776665543 3589999999999999999
Q ss_pred EEecCcCcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCc
Q 002275 378 ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQ 457 (944)
Q Consensus 378 i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p 457 (944)
|+||||||||+|++.|+++...... -+..+++...+.-. -.+.||
T Consensus 585 VvFDKTGTLT~G~~~V~~~~~~~~~----------------------~~~~e~l~~v~a~E-------------s~SeHP 629 (951)
T KOG0207|consen 585 VVFDKTGTLTEGKPTVVDFKSLSNP----------------------ISLKEALALVAAME-------------SGSEHP 629 (951)
T ss_pred EEEcCCCceecceEEEEEEEecCCc----------------------ccHHHHHHHHHHHh-------------cCCcCc
Confidence 9999999999999999998654321 01122222221111 225899
Q ss_pred cHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC
Q 002275 458 DEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 537 (944)
Q Consensus 458 ~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~ 537 (944)
...|++++|++..... ..-..+..-.|..+.....+.+. ++- ..-|.-+.+...-.
T Consensus 630 ig~AIv~yak~~~~~~----------------~~~~~~~~~~~pg~g~~~~~~~~----~~~--i~iGN~~~~~r~~~-- 685 (951)
T KOG0207|consen 630 IGKAIVDYAKEKLVEP----------------NPEGVLSFEYFPGEGIYVTVTVD----GNE--VLIGNKEWMSRNGC-- 685 (951)
T ss_pred hHHHHHHHHHhccccc----------------CccccceeecccCCCcccceEEe----eeE--EeechHHHHHhcCC--
Confidence 9999999999876211 00111222233333333222221 211 44476666554322
Q ss_pred CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCC
Q 002275 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (944)
Q Consensus 538 ~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~ 617 (944)
..++++.+.+++...+|..+.+++ .|.++.|++.++|++|++
T Consensus 686 ~~~~~i~~~~~~~e~~g~tvv~v~--------------------------------------vn~~l~gv~~l~D~vr~~ 727 (951)
T KOG0207|consen 686 SIPDDILDALTESERKGQTVVYVA--------------------------------------VNGQLVGVFALEDQVRPD 727 (951)
T ss_pred CCchhHHHhhhhHhhcCceEEEEE--------------------------------------ECCEEEEEEEeccccchh
Confidence 235668889999999999999999 688999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEE
Q 002275 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVV 697 (944)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 697 (944)
+.++|+.||+.|++++|+|||+..+|.++|+++|+
T Consensus 728 a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi--------------------------------------------- 762 (951)
T KOG0207|consen 728 AALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI--------------------------------------------- 762 (951)
T ss_pred HHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc---------------------------------------------
Confidence 99999999999999999999999999999999996
Q ss_pred cchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHH
Q 002275 698 DGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777 (944)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~ 777 (944)
..+++++.|+||.+.++.+|+.+..|+|+|||.||+|+|.+||+|||| |.+.+-+
T Consensus 763 ------------------------~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai-g~gs~vA 817 (951)
T KOG0207|consen 763 ------------------------DNVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI-GAGSDVA 817 (951)
T ss_pred ------------------------ceEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee-ccccHHH
Confidence 468899999999999999999999999999999999999999999999 7777777
Q ss_pred hhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHH
Q 002275 778 ARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLL 819 (944)
Q Consensus 778 k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~ 819 (944)
.++||+|+..++....+ .+..+|++..|++.++.|.+.+|++
T Consensus 818 ieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~ 860 (951)
T KOG0207|consen 818 IEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLV 860 (951)
T ss_pred HhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 78999999998776655 4678999999999999999888876
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-61 Score=560.24 Aligned_cols=494 Identities=18% Similarity=0.194 Sum_probs=375.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhh---HHhcceEEEEEECC-eEEEEeeccCccccEEEEecCccccccEEEEeccCCC
Q 002275 71 GPLIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQG-IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (944)
Q Consensus 71 ~~l~~i~~i~~~~~~~~~~~~~~~~---~~~~~~~~~V~r~g-~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~ 146 (944)
..++++++++..++.+++++..+.. ...++.+++|+|+| ++++|++++|+|||+|.+++||.|||||+++ +
T Consensus 22 ~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi-----~ 96 (556)
T TIGR01525 22 ALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI-----S 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE-----e
Confidence 3445555556667777776665543 44567899999996 9999999999999999999999999999999 6
Q ss_pred ceEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecc
Q 002275 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (944)
Q Consensus 147 g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt 226 (944)
|.+.||||+|||||.|+.| ..++.+++||
T Consensus 97 g~~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt 125 (556)
T TIGR01525 97 GESEVDESALTGESMPVEK---------------------------------------------------KEGDEVFAGT 125 (556)
T ss_pred cceEEeehhccCCCCCEec---------------------------------------------------CCcCEEeece
Confidence 7799999999999999999 4467899999
Q ss_pred eeecCceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeec
Q 002275 227 YLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (944)
Q Consensus 227 ~~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (944)
.+.+| .+.++|++||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++++.....
T Consensus 126 ~v~~g-~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~----------- 193 (556)
T TIGR01525 126 INGDG-SLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA----------- 193 (556)
T ss_pred EECCc-eEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------
Confidence 99998 69999999999999998755 3455678999999999998888877777776665432110
Q ss_pred CCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCc
Q 002275 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (944)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKT 383 (944)
. ..+. .++.+++..+|++|++++.++...... ++.+ .++++|+++++|.||++|++|||||
T Consensus 194 ----~--~~~~---~~~~vlv~~~P~al~l~~~~~~~~~~~------~~~~----~gilvk~~~~le~l~~v~~i~fDKT 254 (556)
T TIGR01525 194 ----L--GALY---RALAVLVVACPCALGLATPVAILVAIG------VAAR----RGILIKGGDALEKLAKVKTVVFDKT 254 (556)
T ss_pred ----c--hHHH---HHHHHHhhccccchhehhHHHHHHHHH------HHHH----CCceecCchHHHHhhcCCEEEEeCC
Confidence 0 2222 233467778899998877777666554 3333 3489999999999999999999999
Q ss_pred CcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHH
Q 002275 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (944)
Q Consensus 384 GTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all 463 (944)
||||+|+|++.++...+... ....+++.. |..+. ..+.||.+.|++
T Consensus 255 GTLT~~~~~v~~~~~~~~~~---------------------~~~~~~l~~---a~~~e----------~~~~hp~~~Ai~ 300 (556)
T TIGR01525 255 GTLTTGKPTVVDVEPLDDAS---------------------ISEEELLAL---AAALE----------QSSSHPLARAIV 300 (556)
T ss_pred CCCcCCceEEEEEEecCCCC---------------------ccHHHHHHH---HHHHh----------ccCCChHHHHHH
Confidence 99999999999986532110 001122222 22211 225799999999
Q ss_pred HHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHH
Q 002275 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (944)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (944)
+++++.+..... . + ..+.++ .+.....+ +|. .-+..|+++.+ + . ......+.
T Consensus 301 ~~~~~~~~~~~~--~-------------~-~~~~~~----~~gi~~~~----~g~-~~~~lg~~~~~-~-~-~~~~~~~~ 352 (556)
T TIGR01525 301 RYAKKRGLELPK--Q-------------E-DVEEVP----GKGVEATV----DGQ-EEVRIGNPRLL-E-L-AAEPISAS 352 (556)
T ss_pred HHHHhcCCCccc--c-------------c-CeeEec----CCeEEEEE----CCe-eEEEEecHHHH-h-h-cCCCchhh
Confidence 999876643210 0 0 001111 11122211 110 12333555443 1 0 11112234
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHH
Q 002275 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (944)
Q Consensus 544 ~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~ 623 (944)
.+.++++..+|+|++.++ .|.+++|.+.++|+++|+++++|+
T Consensus 353 ~~~~~~~~~~g~~~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~ 394 (556)
T TIGR01525 353 PDLLNEGESQGKTVVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIA 394 (556)
T ss_pred HHHHHHHhhCCcEEEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHH
Confidence 456778889999999999 567999999999999999999999
Q ss_pred HHHHcC-CeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhH
Q 002275 624 TLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (944)
Q Consensus 624 ~l~~~G-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~ 702 (944)
.|+++| ++++|+|||+..++..+++++|+
T Consensus 395 ~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi-------------------------------------------------- 424 (556)
T TIGR01525 395 ALKRAGGIKLVMLTGDNRSAAEAVAAELGI-------------------------------------------------- 424 (556)
T ss_pred HHHHcCCCeEEEEeCCCHHHHHHHHHHhCC--------------------------------------------------
Confidence 999999 99999999999999999999998
Q ss_pred HHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCc
Q 002275 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD 782 (944)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad 782 (944)
..+|+++.|++|.++++.++..+++|+|+|||.||++|++.||+||+| |++.+.++..||
T Consensus 425 -------------------~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad 484 (556)
T TIGR01525 425 -------------------DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAAD 484 (556)
T ss_pred -------------------CeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCC
Confidence 234567789999999999999889999999999999999999999999 776666777999
Q ss_pred EeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHH
Q 002275 783 YSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (944)
Q Consensus 783 ~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~ 821 (944)
+++.+++..... ++..||.++.++++++.|.+..|++..
T Consensus 485 ~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i 524 (556)
T TIGR01525 485 IVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524 (556)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999986664444 468999999999999999988888654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-60 Score=546.91 Aligned_cols=474 Identities=19% Similarity=0.222 Sum_probs=364.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhh---hHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCc
Q 002275 71 GPLIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (944)
Q Consensus 71 ~~l~~i~~i~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g 147 (944)
..++++++++...+.+++++..+. +.++++++++|+|||+++++++++|+|||+|.+++||+|||||+++ +|
T Consensus 22 ~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii-----~g 96 (536)
T TIGR01512 22 ALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL-----SG 96 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE-----eC
Confidence 344555556667777777776554 3456789999999999999999999999999999999999999999 67
Q ss_pred eEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecce
Q 002275 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (944)
Q Consensus 148 ~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~ 227 (944)
.+.||||+|||||.|+.| ..++.+|+||.
T Consensus 97 ~~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~ 125 (536)
T TIGR01512 97 TSTVDESALTGESVPVEK---------------------------------------------------APGDEVFAGAI 125 (536)
T ss_pred cEEEEecccCCCCCcEEe---------------------------------------------------CCCCEEEeeeE
Confidence 799999999999999999 34678999999
Q ss_pred eecCceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecC
Q 002275 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (944)
Q Consensus 228 ~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (944)
+.+| .+.+.|++||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++++..+.
T Consensus 126 v~~G-~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 191 (536)
T TIGR01512 126 NLDG-VLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK------------- 191 (536)
T ss_pred ECCc-eEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 9998 79999999999999998755 344567899999999999888888777776665543211
Q ss_pred CCcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcC
Q 002275 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (944)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTG 384 (944)
.+...+. ..+.++..++|++|+++..++...... ++.+ .++++|+++++|.+|+++++||||||
T Consensus 192 ---~~~~~~~---~~~svlv~~~P~aL~la~~~~~~~~~~------~~~k----~gilik~~~~le~l~~v~~i~fDKTG 255 (536)
T TIGR01512 192 ---RWPFWVY---RALVLLVVASPCALVISAPAAYLSAIS------AAAR----HGILIKGGAALEALAKIKTVAFDKTG 255 (536)
T ss_pred ---ccHHHHH---HHHHHHhhcCccccccchHHHHHHHHH------HHHH----CCeEEcCcHHHHhhcCCCEEEECCCC
Confidence 0111222 223467788999998877776665544 3333 35899999999999999999999999
Q ss_pred cccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHH
Q 002275 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (944)
Q Consensus 385 TLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~ 464 (944)
|||+|+|++.++... +++...+.+. ..+.||.+.|+++
T Consensus 256 TLT~~~~~v~~~~~~-----------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~ 293 (536)
T TIGR01512 256 TLTTGRPKVVDVVPA-----------------------------EVLRLAAAAE-------------QASSHPLARAIVD 293 (536)
T ss_pred CCcCCceEEEEeeHH-----------------------------HHHHHHHHHh-------------ccCCCcHHHHHHH
Confidence 999999999987420 2222222111 2257999999999
Q ss_pred HHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHHH
Q 002275 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (944)
Q Consensus 465 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (944)
++++.+ . +.....+| .+.+...+ +|.. +..|+++.+.+..
T Consensus 294 ~~~~~~-~-------------------~~~~~~~~----g~gi~~~~----~g~~--~~ig~~~~~~~~~---------- 333 (536)
T TIGR01512 294 YARKRE-N-------------------VESVEEVP----GEGVRAVV----DGGE--VRIGNPRSLEAAV---------- 333 (536)
T ss_pred HHHhcC-C-------------------CcceEEec----CCeEEEEE----CCeE--EEEcCHHHHhhcC----------
Confidence 998653 0 00011111 11222221 2332 2347765442211
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHH
Q 002275 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (944)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~ 624 (944)
...+..+|.+++.++ .|..+.|.+.++|+++|+++++|++
T Consensus 334 --~~~~~~~~~~~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~ 373 (536)
T TIGR01512 334 --GARPESAGKTIVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAE 373 (536)
T ss_pred --CcchhhCCCeEEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHH
Confidence 115567788887776 5789999999999999999999999
Q ss_pred HHHcCC-eEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHH
Q 002275 625 LRKAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (944)
Q Consensus 625 l~~~Gi-~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~ 703 (944)
|+++|+ +++|+|||+..++..+++++|+.
T Consensus 374 L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~-------------------------------------------------- 403 (536)
T TIGR01512 374 LKALGIEKVVMLTGDRRAVAERVARELGID-------------------------------------------------- 403 (536)
T ss_pred HHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--------------------------------------------------
Confidence 999999 99999999999999999999982
Q ss_pred HHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc-cchHHHhhhCc
Q 002275 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAAD 782 (944)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~k~~Ad 782 (944)
.+|+++.|++|..+++.++..++.|+|+|||.||++|++.||+||+| | ++.+.++..||
T Consensus 404 -------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad 463 (536)
T TIGR01512 404 -------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM-GASGSDVAIETAD 463 (536)
T ss_pred -------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCC
Confidence 23456789999999999999999999999999999999999999999 6 56666777999
Q ss_pred EeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHH
Q 002275 783 YSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (944)
Q Consensus 783 ~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~ 822 (944)
+++.+++..... .+..||.++.++++++.|.+.+|++...
T Consensus 464 ~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 464 VVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999665553333 4689999999999999999888765433
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-59 Score=540.87 Aligned_cols=473 Identities=19% Similarity=0.214 Sum_probs=355.2
Q ss_pred HHHHHHHHHHHHHHHHhhh---hHHhcceEEEEEEC-CeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEE
Q 002275 76 IFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYV 151 (944)
Q Consensus 76 i~~i~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~-g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~V 151 (944)
++.++..++.+...+..+. +.++.|.+++++|+ |++++|++++|+|||+|.|++||+|||||+++ +|.+.|
T Consensus 63 ~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~-----~g~~~v 137 (562)
T TIGR01511 63 FILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVI-----EGESEV 137 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEE-----ECceEE
Confidence 3333444444444444333 45567889999985 66799999999999999999999999999999 778999
Q ss_pred EeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecC
Q 002275 152 ETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT 231 (944)
Q Consensus 152 des~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g 231 (944)
|||+|||||.|+.| ..++.+|+||.+.+|
T Consensus 138 des~lTGEs~pv~k---------------------------------------------------~~gd~V~aGt~~~~g 166 (562)
T TIGR01511 138 DESLVTGESLPVPK---------------------------------------------------KVGDPVIAGTVNGTG 166 (562)
T ss_pred ehHhhcCCCCcEEc---------------------------------------------------CCCCEEEeeeEECCc
Confidence 99999999999999 456789999999998
Q ss_pred ceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcc
Q 002275 232 EWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFP 308 (944)
Q Consensus 232 ~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (944)
.+.+.|+++|.+|.++++.+ ..+.+++++++..++++.++.+++++++++.+++|.
T Consensus 167 -~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------- 225 (562)
T TIGR01511 167 -SLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------- 225 (562)
T ss_pred -eEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 79999999999999998765 445567899999999999998888777776655431
Q ss_pred hhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccc
Q 002275 309 WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTE 388 (944)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~ 388 (944)
..+. ..+.+++.++|++|+++..++...... ++. +.++++|++.++|.|++++++|||||||||+
T Consensus 226 --~~~~---~~~svlvvacPcaL~la~p~a~~~~~~------~aa----~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~ 290 (562)
T TIGR01511 226 --FALE---FAVTVLIIACPCALGLATPTVIAVATG------LAA----KNGVLIKDGDALERAANIDTVVFDKTGTLTQ 290 (562)
T ss_pred --HHHH---HHHHHHHHhccchhhhHHHHHHHHHHH------HHH----HCCeEEcChHHHHHhhCCCEEEECCCCCCcC
Confidence 1111 222356667787776555554444332 222 2458999999999999999999999999999
Q ss_pred cceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHh
Q 002275 389 NRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (944)
Q Consensus 389 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~ 468 (944)
|+|++.++...+.. + ..+++..++.+. ..+.||.+.|+++++++
T Consensus 291 g~~~v~~i~~~~~~---------------------~--~~~~l~~aa~~e-------------~~s~HPia~Ai~~~~~~ 334 (562)
T TIGR01511 291 GKPTVTDVHVFGDR---------------------D--RTELLALAAALE-------------AGSEHPLAKAIVSYAKE 334 (562)
T ss_pred CCEEEEEEecCCCC---------------------C--HHHHHHHHHHHh-------------ccCCChHHHHHHHHHHh
Confidence 99999997542210 0 112222222111 22579999999999987
Q ss_pred CCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHHHHHHH
Q 002275 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (944)
Q Consensus 469 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (944)
.+...... .. .+.+| .+.+...+ +| .-+..|+++.+.+... . +.
T Consensus 335 ~~~~~~~~-------------~~---~~~~~----g~Gi~~~~----~g--~~~~iG~~~~~~~~~~---~-------~~ 378 (562)
T TIGR01511 335 KGITLVEV-------------SD---FKAIP----GIGVEGTV----EG--TKIQLGNEKLLGENAI---K-------ID 378 (562)
T ss_pred cCCCcCCC-------------CC---eEEEC----CceEEEEE----CC--EEEEEECHHHHHhCCC---C-------CC
Confidence 66432100 00 01111 22222222 22 2245577776532210 0 11
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHc
Q 002275 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (944)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~ 628 (944)
++..+|.+++.++ .|.+++|+++++|+++|+++++|++|++.
T Consensus 379 ~~~~~g~~~~~~~--------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~ 420 (562)
T TIGR01511 379 GKAEQGSTSVLVA--------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRR 420 (562)
T ss_pred hhhhCCCEEEEEE--------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHc
Confidence 2457899998887 68899999999999999999999999999
Q ss_pred CCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHH
Q 002275 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (944)
Q Consensus 629 Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~ 708 (944)
|++++|+|||+...+..+++++|+.
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------------------------------- 445 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN------------------------------------------------------- 445 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------------------------------
Confidence 9999999999999999999999971
Q ss_pred HHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccc
Q 002275 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (944)
Q Consensus 709 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~ 788 (944)
+++++.|++|.++++.++..++.|+|+|||.||++|++.||+||+| |++.+.++..||+++.++
T Consensus 446 ---------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~-g~g~~~a~~~Advvl~~~ 509 (562)
T TIGR01511 446 ---------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI-GAGTDVAIEAADVVLMRN 509 (562)
T ss_pred ---------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe-CCcCHHHHhhCCEEEeCC
Confidence 3456689999999999999999999999999999999999999999 776666677999999865
Q ss_pred cchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHH
Q 002275 789 RFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (944)
Q Consensus 789 ~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~ 821 (944)
+.-... ++..||.+++++++++.|.+..|++..
T Consensus 510 ~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 510 DLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543322 368999999999999999988887643
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-58 Score=561.58 Aligned_cols=485 Identities=19% Similarity=0.194 Sum_probs=369.9
Q ss_pred HHHHHHHHHHHHHhh---h---hHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEE
Q 002275 79 VSATKEAWDDYNRYL---S---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (944)
Q Consensus 79 i~~~~~~~~~~~~~~---~---~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vd 152 (944)
+..+.++++++-+.+ . +.++.|++++|+|+|++++|+.++|+|||+|.|++||+|||||+++ +|.+.||
T Consensus 295 ~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~-----~g~~~vd 369 (834)
T PRK10671 295 LINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT-----QGEAWLD 369 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE-----EceEEEe
Confidence 333344444444433 2 4456788999999999999999999999999999999999999999 7789999
Q ss_pred eccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCc
Q 002275 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (944)
Q Consensus 153 es~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~ 232 (944)
||+|||||.|+.| ..++.+++||.+.+|
T Consensus 370 eS~lTGEs~pv~k---------------------------------------------------~~gd~V~aGt~~~~G- 397 (834)
T PRK10671 370 EAMLTGEPIPQQK---------------------------------------------------GEGDSVHAGTVVQDG- 397 (834)
T ss_pred ehhhcCCCCCEec---------------------------------------------------CCCCEEEecceecce-
Confidence 9999999999999 456789999999999
Q ss_pred eEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcch
Q 002275 233 WACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPW 309 (944)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (944)
.+.+.|+++|.+|.++++.+ ..+..++++++..++++.++.+++++++++.+++|.... ....+
T Consensus 398 ~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~-------------~~~~~ 464 (834)
T PRK10671 398 SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFG-------------PAPQI 464 (834)
T ss_pred eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------CchHH
Confidence 79999999999999998654 445567899999999999998888877777666543211 00012
Q ss_pred hhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCccccc
Q 002275 310 YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTEN 389 (944)
Q Consensus 310 ~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~ 389 (944)
...+..++ .+++.++|++|+.+..++...... ++. +.++++|+++++|.||+++++|||||||||+|
T Consensus 465 ~~~~~~a~---~vlv~acPcaL~la~p~a~~~~~~------~~a----~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g 531 (834)
T PRK10671 465 VYTLVIAT---TVLIIACPCALGLATPMSIISGVG------RAA----EFGVLVRDADALQRASTLDTLVFDKTGTLTEG 531 (834)
T ss_pred HHHHHHHH---HHHHHhcccchhhhHHHHHHHHHH------HHH----HCCeEEecHHHHHhhcCCCEEEEcCCCccccC
Confidence 22222222 366677888887666665544433 222 34589999999999999999999999999999
Q ss_pred ceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHH-HhhhcceecccccCCCceeeecCCccHHHHHHHHHh
Q 002275 390 RMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLT-VMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (944)
Q Consensus 390 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~ 468 (944)
+|+|.++...+.. + ..+++. +.+++ ..+.||.+.|+++++..
T Consensus 532 ~~~v~~~~~~~~~---------------------~--~~~~l~~a~~~e--------------~~s~hp~a~Ai~~~~~~ 574 (834)
T PRK10671 532 KPQVVAVKTFNGV---------------------D--EAQALRLAAALE--------------QGSSHPLARAILDKAGD 574 (834)
T ss_pred ceEEEEEEccCCC---------------------C--HHHHHHHHHHHh--------------CCCCCHHHHHHHHHHhh
Confidence 9999987532200 0 011222 22222 12579999999998864
Q ss_pred CCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHHHHHHH
Q 002275 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (944)
Q Consensus 469 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (944)
.... ....++.. + .+.+...+ +|. .+.+|+++.+..... ..+.+.+.++
T Consensus 575 ~~~~---------------~~~~~~~~---~----g~Gv~~~~----~g~--~~~~G~~~~~~~~~~---~~~~~~~~~~ 623 (834)
T PRK10671 575 MTLP---------------QVNGFRTL---R----GLGVSGEA----EGH--ALLLGNQALLNEQQV---DTKALEAEIT 623 (834)
T ss_pred CCCC---------------CcccceEe---c----ceEEEEEE----CCE--EEEEeCHHHHHHcCC---ChHHHHHHHH
Confidence 3210 00011110 0 01111111 233 245699887643221 2345667778
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHc
Q 002275 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (944)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~ 628 (944)
++..+|.+++.+| .|..++|+++++|++||+++++|++|++.
T Consensus 624 ~~~~~g~~~v~va--------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~ 665 (834)
T PRK10671 624 AQASQGATPVLLA--------------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKA 665 (834)
T ss_pred HHHhCCCeEEEEE--------------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHC
Confidence 8899999999999 46679999999999999999999999999
Q ss_pred CCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHH
Q 002275 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (944)
Q Consensus 629 Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~ 708 (944)
|++++|+|||+..++..+++++|+
T Consensus 666 gi~v~~~Tgd~~~~a~~ia~~lgi-------------------------------------------------------- 689 (834)
T PRK10671 666 GYRLVMLTGDNPTTANAIAKEAGI-------------------------------------------------------- 689 (834)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCC--------------------------------------------------------
Confidence 999999999999999999999998
Q ss_pred HHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccc
Q 002275 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (944)
Q Consensus 709 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~ 788 (944)
..+++++.|++|.++++.++..++.|+|+|||.||++|++.||+||+| |++.+.++++||+++.++
T Consensus 690 -------------~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~-g~g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 690 -------------DEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM-GGGSDVAIETAAITLMRH 755 (834)
T ss_pred -------------CEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe-cCCCHHHHHhCCEEEecC
Confidence 235667889999999999999999999999999999999999999999 888888889999999887
Q ss_pred cchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHH
Q 002275 789 RFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (944)
Q Consensus 789 ~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~ 822 (944)
+.-... ++..||..+.++++++.|.+.+|++...
T Consensus 756 ~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 756 SLMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765444 4688999999999999999998886543
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-50 Score=422.15 Aligned_cols=482 Identities=21% Similarity=0.249 Sum_probs=347.4
Q ss_pred eEEEEEEC-CeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeeccccccCCCHhhh
Q 002275 101 KEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179 (944)
Q Consensus 101 ~~~~V~r~-g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~ 179 (944)
..++++++ |.++.+++.+|+.||+|.++.||.||+||.++ +|..+||||++||||.|+.|.+.
T Consensus 104 ~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVI-----eG~asVdESAITGESaPViresG----------- 167 (681)
T COG2216 104 TIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVI-----EGVASVDESAITGESAPVIRESG----------- 167 (681)
T ss_pred HHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEE-----eeeeecchhhccCCCcceeeccC-----------
Confidence 35666665 89999999999999999999999999999999 89999999999999999999542
Q ss_pred ccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccC---CCCCC
Q 002275 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR---GIPEP 256 (944)
Q Consensus 180 ~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~---~~~~~ 256 (944)
...+.+-.||.+.+. |+...++..-.+|.+-++. ..++.
T Consensus 168 -------------------------------------gD~ssVtGgT~v~SD-~l~irita~pG~sFlDrMI~LVEgA~R 209 (681)
T COG2216 168 -------------------------------------GDFSSVTGGTRVLSD-WLKIRITANPGETFLDRMIALVEGAER 209 (681)
T ss_pred -------------------------------------CCcccccCCcEEeee-eEEEEEEcCCCccHHHHHHHHhhchhc
Confidence 112347789999987 9999999998889888753 35556
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHHhccccceEEE---e
Q 002275 257 KLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIK---V 333 (944)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~~l~---v 333 (944)
+++|-+.-++.+...+.++.+++..-.+-+. .|. .... ... ...+.+++.++|..+- -
T Consensus 210 ~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a-----------~y~---~g~~-~~i----~~LiALlV~LIPTTIGgLLs 270 (681)
T COG2216 210 QKTPNEIALTILLSGLTLIFLLAVATLYPFA-----------IYS---GGGA-ASV----TVLVALLVCLIPTTIGGLLS 270 (681)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHhhhhHH-----------HHc---CCCC-cCH----HHHHHHHHHHhcccHHHHHH
Confidence 6677777766654433322221111111010 010 0001 111 1112256667787542 2
Q ss_pred eHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCCCCCc
Q 002275 334 SLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKD 413 (944)
Q Consensus 334 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~ 413 (944)
++.++-. . ++. ..++..+++.++|..|.+|++..|||||+|-|+-.-.++...+
T Consensus 271 AIGIAGM-d--------Rv~----~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~------------- 324 (681)
T COG2216 271 AIGIAGM-D--------RVT----QFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP------------- 324 (681)
T ss_pred Hhhhhhh-h--------Hhh----hhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC-------------
Confidence 2222211 1 121 2237789999999999999999999999999976555443211
Q ss_pred hhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEE
Q 002275 414 VGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYE 493 (944)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 493 (944)
..+..++..+..+++-. -+.|..+++++.|++.+........ -.
T Consensus 325 ----------gv~~~~la~aa~lsSl~-------------DeTpEGrSIV~LA~~~~~~~~~~~~-------------~~ 368 (681)
T COG2216 325 ----------GVSEEELADAAQLASLA-------------DETPEGRSIVELAKKLGIELREDDL-------------QS 368 (681)
T ss_pred ----------CCCHHHHHHHHHHhhhc-------------cCCCCcccHHHHHHHhccCCCcccc-------------cc
Confidence 12233455555444421 2578889999999998854321110 00
Q ss_pred EEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhccccccc--CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHH
Q 002275 494 ILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQ 571 (944)
Q Consensus 494 ~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~--~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~ 571 (944)
.....||+.+.+++.+-..+ + .-+.|||.+.+.....+ +..+++++...++.+..|-++++++
T Consensus 369 ~~~fvpFtA~TRmSGvd~~~---~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~---------- 433 (681)
T COG2216 369 HAEFVPFTAQTRMSGVDLPG---G--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV---------- 433 (681)
T ss_pred cceeeecceecccccccCCC---C--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE----------
Confidence 23568999998888876543 2 56789999999998763 3467889999999999999999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcC
Q 002275 572 EWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651 (944)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~g 651 (944)
.|.+++|++.++|-++++.+|-+.+||+.|||.+|+|||++.||..+|.+.|
T Consensus 434 ----------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAG 485 (681)
T COG2216 434 ----------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG 485 (681)
T ss_pred ----------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhC
Confidence 6889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh
Q 002275 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS 731 (944)
Q Consensus 652 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 731 (944)
++ ...++++|+
T Consensus 486 VD---------------------------------------------------------------------dfiAeatPE 496 (681)
T COG2216 486 VD---------------------------------------------------------------------DFIAEATPE 496 (681)
T ss_pred ch---------------------------------------------------------------------hhhhcCChH
Confidence 73 234688999
Q ss_pred hHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhH
Q 002275 732 QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLS 810 (944)
Q Consensus 732 ~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~ 810 (944)
+|.++++.-|..|+-|+|+|||.||+|+|.+||||+|| .++...+|++|++|-.|.+.-+.+ ++.-|++.+-.--.+.
T Consensus 497 dK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM-NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLT 575 (681)
T COG2216 497 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALT 575 (681)
T ss_pred HHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh-ccccHHHHHhhcccccCCCccceehHhhhhhhheeecccce
Confidence 99999999999999999999999999999999999999 666666777999998876664433 2345766554433344
Q ss_pred HhhhhHHHHH---HHHHHHHHhh
Q 002275 811 QYSFYKSLLI---CFIQIFFSFI 830 (944)
Q Consensus 811 ~~~~~~~~~~---~~~~~~~~~~ 830 (944)
.|++..-+.- .++.+++.++
T Consensus 576 TFSIANDvAKYFaIiPA~F~~~~ 598 (681)
T COG2216 576 TFSIANDVAKYFAIIPAMFAAAY 598 (681)
T ss_pred eeehhhHHHHHHHHHHHHHHhhc
Confidence 4554433322 2344444444
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=264.22 Aligned_cols=222 Identities=24% Similarity=0.395 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHh---cceE-EEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCce
Q 002275 73 LIFIFAVSATKEAWDDYNRYLSDKKA---NEKE-VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (944)
Q Consensus 73 l~~i~~i~~~~~~~~~~~~~~~~~~~---~~~~-~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~ 148 (944)
++++++++.+++.++++++++..+++ ++++ ++|+|||++++++++||+|||||.|++||++||||++++ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 45677778888999999988887665 3445 999999999999999999999999999999999999994 278
Q ss_pred EEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeeccee
Q 002275 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (944)
Q Consensus 149 ~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~ 228 (944)
+.||||.+|||+.|+.|.+. +...+|++++||.+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------------~~~~~~~i~~Gs~v 111 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------------PLNPGNIIFAGSIV 111 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------------CCCTTTEE-TTEEE
T ss_pred cccccccccccccccccccc----------------------------------------------cccccchhhccccc
Confidence 99999999999999999542 22678999999999
Q ss_pred ecCceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCC
Q 002275 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (944)
Q Consensus 229 ~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (944)
.+| +++++|++||.+|+.+++.+ ..+.+++++++.++++..++.++.+++++++++++..+ ..
T Consensus 112 ~~g-~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 177 (230)
T PF00122_consen 112 VSG-WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-------------DS 177 (230)
T ss_dssp EEE-EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-------------ST
T ss_pred ccc-ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec-------------cc
Confidence 977 89999999999999998655 44556699999999999998888777777666554322 01
Q ss_pred CcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCccccccccccc
Q 002275 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371 (944)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~ 371 (944)
...+...+. .++.+++.++|++|++.+.++...+..+ |.+. ++.+|++.++|+
T Consensus 178 ~~~~~~~~~---~~i~~l~~~~P~~l~~~~~~~~~~~~~~------~~~~----~i~v~~~~a~E~ 230 (230)
T PF00122_consen 178 GISFFKSFL---FAISLLIVLIPCALPLALPLSLAIAARR------LAKN----GIIVKNLSALEA 230 (230)
T ss_dssp TCHCCHHHH---HHHHHHHHHS-TTHHHHHHHHHHHHHHH------HHHT----TEEESSTTHHHH
T ss_pred ccccccccc---cccceeeeecccceeehHHHHHHHHHHH------HHHC----CEEEeCcccccC
Confidence 223334433 3345778889999999888888877663 3332 378999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-21 Score=200.89 Aligned_cols=98 Identities=31% Similarity=0.487 Sum_probs=91.3
Q ss_pred ccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHH
Q 002275 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (944)
Q Consensus 600 ~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (944)
.++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~-------------------------- 167 (215)
T PF00702_consen 114 VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF-------------------------- 167 (215)
T ss_dssp ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC--------------------------
T ss_pred ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc--------------------------
Confidence 378999999999999999999999999999999999999999999999999982
Q ss_pred HHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEe--ChhhH--HHHHHHHhhcCCeEEEecCCcc
Q 002275 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQK--AQLVELLKSCDYRTLAIGDGGN 755 (944)
Q Consensus 680 ~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K--~~iv~~l~~~~~~v~~iGDg~N 755 (944)
...+++++ +|++| .++++.|+..++.|+|+|||.|
T Consensus 168 -----------------------------------------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 168 -----------------------------------------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp -----------------------------------------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGG
T ss_pred -----------------------------------------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHH
Confidence 14578888 99999 9999999977779999999999
Q ss_pred chhhhhhcC
Q 002275 756 DVRMIQKAD 764 (944)
Q Consensus 756 D~~ml~~A~ 764 (944)
|++|+++||
T Consensus 207 D~~al~~Ag 215 (215)
T PF00702_consen 207 DAPALKAAG 215 (215)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHhCc
Confidence 999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-14 Score=151.79 Aligned_cols=185 Identities=21% Similarity=0.267 Sum_probs=114.5
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC-----CCCCeEEEe--cCCC-----
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-----EPKGQLLSI--DGKT----- 668 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~-----~~~~~~~~~--~~~~----- 668 (944)
|.|++.- ..++.+.++++|++|+++|++++++|||+...+..+++++++..+ ..+|.++.. ++..
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 5555532 346899999999999999999999999999999999999997532 123444432 2321
Q ss_pred --HHHHHHHHHHHHHHhhc--c----------cC--------------------------CCCc-EE-EEEcc-hhHHHH
Q 002275 669 --EDEVCRSLERVLLTMRI--T----------TS--------------------------EPKD-VA-FVVDG-WALEIA 705 (944)
Q Consensus 669 --~~~~~~~~~~~~~~~~~--~----------~~--------------------------~~~~-~~-lv~~~-~~~~~~ 705 (944)
.+... .+......... . .. .... .. ++... +.+...
T Consensus 88 l~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 166 (270)
T PRK10513 88 LSYDDYL-YLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAA 166 (270)
T ss_pred CCHHHHH-HHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHH
Confidence 11111 11111110000 0 00 0000 00 11111 111111
Q ss_pred HHHHHHHHH-hhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHh
Q 002275 706 LKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778 (944)
Q Consensus 706 ~~~~~~~~~-~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k 778 (944)
.+.+.+.+. .+....+...+.+++|. +|+..++.+.+. .++|++||||.||++||+.||+|||| +|+.+++|
T Consensus 167 ~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~NA~~~vK 245 (270)
T PRK10513 167 IARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM-GNAIPSVK 245 (270)
T ss_pred HHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe-cCccHHHH
Confidence 112222211 12222233457799997 599988888764 46899999999999999999999999 99999999
Q ss_pred hhCcEeeccccc
Q 002275 779 RAADYSIGKFRF 790 (944)
Q Consensus 779 ~~Ad~v~~~~~~ 790 (944)
+.||+|+.+++.
T Consensus 246 ~~A~~vt~~n~~ 257 (270)
T PRK10513 246 EVAQFVTKSNLE 257 (270)
T ss_pred HhcCeeccCCCc
Confidence 999999976544
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.4e-14 Score=151.43 Aligned_cols=183 Identities=23% Similarity=0.284 Sum_probs=114.9
Q ss_pred Eecccc-ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecCCCHH------HHHHHHH
Q 002275 607 VTAIED-RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTED------EVCRSLE 677 (944)
Q Consensus 607 ~i~~~d-~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~~~------~~~~~~~ 677 (944)
.+.-.+ ++.+.++++|++++++|++++++|||+...+..+.+++++..+ ..+|..+...+.... +....+.
T Consensus 13 TLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~ 92 (264)
T COG0561 13 TLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELL 92 (264)
T ss_pred CccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHH
Confidence 333344 3999999999999999999999999999999999999998753 122333332222211 1111111
Q ss_pred HHHHHh-h----cccC--------C----------------------CC---cEEEEEcchhHHHHHHHHHHHHHhh--h
Q 002275 678 RVLLTM-R----ITTS--------E----------------------PK---DVAFVVDGWALEIALKHYRKAFTEL--A 717 (944)
Q Consensus 678 ~~~~~~-~----~~~~--------~----------------------~~---~~~lv~~~~~~~~~~~~~~~~~~~~--~ 717 (944)
...... . .... . .. ...+....+......+.+.+.+... .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 172 (264)
T COG0561 93 ELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLT 172 (264)
T ss_pred HHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceE
Confidence 111111 0 0000 0 00 0011111222333333333333311 1
Q ss_pred hccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 718 ILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 718 ~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
...+...+.++.|. +|+..++.+.+. .++|++|||+.||++||+.|+.|||| +|+.+++|+.||+++.+++.
T Consensus 173 ~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 173 VSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHHHHhhCCcccCCccc
Confidence 22233344899998 599988888773 35699999999999999999999999 99999999999988776555
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-13 Score=147.85 Aligned_cols=185 Identities=19% Similarity=0.180 Sum_probs=113.3
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEE-ecCCC-------HH
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKT-------ED 670 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~-~~~~~-------~~ 670 (944)
|.|++. -...+.+.++++|++|+++|++++++|||+...+..+.+++++..+ ..+|..+. .++.. .+
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 455553 1336999999999999999999999999999999999999997543 22333333 12211 11
Q ss_pred HHHHHHHHHHHH-hh----------------------------ccc--------CCCCcEEEEEcchhHHHHHHHHHHHH
Q 002275 671 EVCRSLERVLLT-MR----------------------------ITT--------SEPKDVAFVVDGWALEIALKHYRKAF 713 (944)
Q Consensus 671 ~~~~~~~~~~~~-~~----------------------------~~~--------~~~~~~~lv~~~~~~~~~~~~~~~~~ 713 (944)
.....++..... .. ... ....+..+..+.+......+.+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 111111111000 00 000 00001111111112222222222222
Q ss_pred H-hhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcE--e
Q 002275 714 T-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--S 784 (944)
Q Consensus 714 ~-~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~--v 784 (944)
. .+....+...+.+++|. +|+..++.+.+. .++|++||||.||++||+.|++|||| +|+.+++|+.||+ |
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~~vK~~A~~~~v 245 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMPQLRAELPHLPV 245 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChHHHHHhCCCCee
Confidence 2 12222223357799998 599999988764 46899999999999999999999999 9999999999986 6
Q ss_pred ecccc
Q 002275 785 IGKFR 789 (944)
Q Consensus 785 ~~~~~ 789 (944)
+.+++
T Consensus 246 ~~~n~ 250 (272)
T PRK15126 246 IGHCR 250 (272)
T ss_pred cCCCc
Confidence 65543
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.4e-14 Score=148.31 Aligned_cols=186 Identities=19% Similarity=0.142 Sum_probs=113.0
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEE-ecCCCHH-------
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKTED------- 670 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~-~~~~~~~------- 670 (944)
|.|++.- ..++.+.++++|++++++|++++++|||+...+..+.+.+++..+ ..+|.++. .++..+.
T Consensus 10 DGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~ 86 (266)
T PRK10976 10 DGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRD 86 (266)
T ss_pred CCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHH
Confidence 4555521 235889999999999999999999999999999999999987543 22343443 2232221
Q ss_pred HHHHHHHHHHHH--hh--cccC--------------------------------CCCcEEEEE-c--chhHHHHHHHHHH
Q 002275 671 EVCRSLERVLLT--MR--ITTS--------------------------------EPKDVAFVV-D--GWALEIALKHYRK 711 (944)
Q Consensus 671 ~~~~~~~~~~~~--~~--~~~~--------------------------------~~~~~~lv~-~--~~~~~~~~~~~~~ 711 (944)
.....++..... .. .... ......+.+ . ...+....+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~ 166 (266)
T PRK10976 87 IASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINA 166 (266)
T ss_pred HHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHH
Confidence 111111111000 00 0000 000001111 1 1111122222222
Q ss_pred HHH-hhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCc--
Q 002275 712 AFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD-- 782 (944)
Q Consensus 712 ~~~-~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad-- 782 (944)
.+. .+........+.+++|. +|+..++.+.+. .++|++||||.||++||+.|++|||| +|+.+++|+.||
T Consensus 167 ~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~~vK~~A~~~ 245 (266)
T PRK10976 167 RWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQRLKDLLPEL 245 (266)
T ss_pred HhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcHHHHHhCCCC
Confidence 221 12222223457899998 599988888764 46899999999999999999999999 999999999987
Q ss_pred Eeeccccc
Q 002275 783 YSIGKFRF 790 (944)
Q Consensus 783 ~v~~~~~~ 790 (944)
+|+.+++.
T Consensus 246 ~v~~~n~e 253 (266)
T PRK10976 246 EVIGSNAD 253 (266)
T ss_pred eecccCch
Confidence 77765443
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-13 Score=118.24 Aligned_cols=126 Identities=23% Similarity=0.344 Sum_probs=107.8
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHH
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (944)
-+...+.++---++-++++++|++|++. ++++++|||...+....|.-.|+..
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~-------------------------- 70 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV-------------------------- 70 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce--------------------------
Confidence 3567888888899999999999999999 9999999999999999999998621
Q ss_pred HHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhh
Q 002275 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (944)
Q Consensus 681 ~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml 760 (944)
..+++...|+.|.++++.|++.++.|+|+|||.||.+||
T Consensus 71 -----------------------------------------~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laL 109 (152)
T COG4087 71 -----------------------------------------ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILAL 109 (152)
T ss_pred -----------------------------------------eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHh
Confidence 346677789999999999999999999999999999999
Q ss_pred hhcCeeEEeccc--chHHHhhhCcEeeccccchhHH
Q 002275 761 QKADIGVGISGR--EGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 761 ~~A~vgIam~gn--~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+.||+||..-++ ..+.+..+||+++.+...+..+
T Consensus 110 r~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl 145 (152)
T COG4087 110 READLGICTIQQEGVPERLLLTADVVLKEIAEILDL 145 (152)
T ss_pred hhcccceEEeccCCcchHHHhhchhhhhhHHHHHHH
Confidence 999999865344 4455667899999876655544
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=136.37 Aligned_cols=175 Identities=21% Similarity=0.234 Sum_probs=108.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEec--CC-----CHHHHHHHHHHHHHHh
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID--GK-----TEDEVCRSLERVLLTM 683 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~ 683 (944)
++.+.+.++|++++++|++++++|||+...+..+++.+++..+ ..+|..+... +. ........+.......
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4889999999999999999999999999999999999987543 2233333321 21 1111111111111111
Q ss_pred hc-----ccCC--CCcEEEE-EcchhHHHHHHHHHHHHH-hhhhccceeEEEEeChhh--HHHHHHHHhhc----CCeEE
Q 002275 684 RI-----TTSE--PKDVAFV-VDGWALEIALKHYRKAFT-ELAILSRTAICCRVTPSQ--KAQLVELLKSC----DYRTL 748 (944)
Q Consensus 684 ~~-----~~~~--~~~~~lv-~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~p~~--K~~iv~~l~~~----~~~v~ 748 (944)
.. .... .....+. ......+...+.+ +.+. .+. ......+.++.|.+ |+..++.+.+. .++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~-~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i 177 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELL-EELGLDLE-IVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVA 177 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHH-HHcCCcEE-EEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 00 0000 0001111 1121112111111 1111 111 11122456888874 99888877653 46799
Q ss_pred EecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 749 ~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+|||+.||++|++.|++|||| +|+.+++|+.||+|+.+++.
T Consensus 178 ~~GD~~NDi~m~~~ag~~vam-~Na~~~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 178 AIGDSENDLEMFEVAGFGVAV-ANADEELKEAADYVTEKSYG 218 (230)
T ss_pred EECCchhhHHHHHhcCceEEe-cCccHHHHHhcceEecCCCc
Confidence 999999999999999999999 99999999999999976544
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-12 Score=137.70 Aligned_cols=179 Identities=21% Similarity=0.295 Sum_probs=117.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEE-EecC-------CCHHHHHHHHHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLL-SIDG-------KTEDEVCRSLERVL 680 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~-~~~~-------~~~~~~~~~~~~~~ 680 (944)
...+.++++++|++++++|++++++|||+...+..+..++++..+ ..+|.++ ...+ -..+.....+....
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 346889999999999999999999999999999999999997632 1122233 1111 11112222222111
Q ss_pred HHh-hc--------------------------------------ccCCCCcEEEEEcchhHHHHHHHHHHHHHhh-hhcc
Q 002275 681 LTM-RI--------------------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTEL-AILS 720 (944)
Q Consensus 681 ~~~-~~--------------------------------------~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~-~~~~ 720 (944)
..- .. ......+..+..+......+.+.+.+.+... ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 100 00 0001112222233344455555555555433 3333
Q ss_pred ceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 721 RTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 721 ~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
....+.+++|. +|+..++.+.+. .+.+++|||+.||++||+.||.|||| +|+.+.+++.||+++.+.+.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPELKKAADYITPSNND 247 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHHHHHSSEEESSGTC
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHHHHhCCEEecCCCC
Confidence 44567788887 599988888763 47899999999999999999999999 99999999999999986554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.4e-13 Score=152.04 Aligned_cols=187 Identities=16% Similarity=0.208 Sum_probs=113.2
Q ss_pred ccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC-----------CCCeEEE-ecCC
Q 002275 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----------PKGQLLS-IDGK 667 (944)
Q Consensus 600 ~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~-----------~~~~~~~-~~~~ 667 (944)
-|.|++.- ...+.+.++++|++++++|++++++|||+...+..+.+++++.... .+|.++. .++.
T Consensus 315 LDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~ 391 (580)
T PLN02887 315 MDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGR 391 (580)
T ss_pred CCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCc
Confidence 35666631 3368999999999999999999999999999999999988864211 1233332 1221
Q ss_pred -------CHHHHHHHHHHHHH-Hhhc--ccC-----------------------------------CCCcEEEEEcch--
Q 002275 668 -------TEDEVCRSLERVLL-TMRI--TTS-----------------------------------EPKDVAFVVDGW-- 700 (944)
Q Consensus 668 -------~~~~~~~~~~~~~~-~~~~--~~~-----------------------------------~~~~~~lv~~~~-- 700 (944)
..+.....+..... .... ... ......+.+.+.
T Consensus 392 ~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e 471 (580)
T PLN02887 392 EIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAE 471 (580)
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChH
Confidence 11111111111100 0000 000 000001111111
Q ss_pred h-HHHHHHHHHHHHH-hhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 701 A-LEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 701 ~-~~~~~~~~~~~~~-~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
. .....+.+.+.+. .+....+...+.+++|. +|+..++.+.+. .++|++||||.||++||+.||+|||| ||
T Consensus 472 ~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM-gN 550 (580)
T PLN02887 472 GVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL-SN 550 (580)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe-CC
Confidence 0 0111111112111 12222233457899998 599999988764 36899999999999999999999999 99
Q ss_pred chHHHhhhCcEeeccccc
Q 002275 773 EGLQAARAADYSIGKFRF 790 (944)
Q Consensus 773 ~~~~~k~~Ad~v~~~~~~ 790 (944)
+.+++|+.||+|+.+++.
T Consensus 551 A~eeVK~~Ad~VT~sNdE 568 (580)
T PLN02887 551 GAEKTKAVADVIGVSNDE 568 (580)
T ss_pred CCHHHHHhCCEEeCCCCc
Confidence 999999999999976544
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-12 Score=135.54 Aligned_cols=176 Identities=17% Similarity=0.192 Sum_probs=105.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecCCC-------HHH--HHHHHHHHH-
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKT-------EDE--VCRSLERVL- 680 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~-------~~~--~~~~~~~~~- 680 (944)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ..+|..+...+.. ..+ .........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 5888999999999999999999999999999999999985432 1122222222110 000 000000000
Q ss_pred --HHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecC
Q 002275 681 --LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGD 752 (944)
Q Consensus 681 --~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGD 752 (944)
...............+......+.. ....+.+..-........+.++.|. +|+..++.+.+. .+.+++|||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTV-REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHH-HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0000000001111111111111111 1122222110011122346788886 699888877653 467999999
Q ss_pred CccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 753 GGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 753 g~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+.||++|++.|++|+|| +|+.+++|+.||+|+.+++.
T Consensus 174 ~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAV-ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred CHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCCCCC
Confidence 99999999999999999 99999999999999875443
|
catalyze the same reaction as SPP. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-13 Score=117.98 Aligned_cols=89 Identities=31% Similarity=0.402 Sum_probs=70.0
Q ss_pred hhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEec
Q 002275 435 AVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514 (944)
Q Consensus 435 ~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~ 514 (944)
++||++....+++.......|+|+|.||++++...|.... .......+++++.+||+|+||||+|+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~S~rK~msvv~~-- 68 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFDSERKRMSVVVR-- 68 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccCcccceeEEEEe--
Confidence 5899888765544332225799999999999999865321 1234577899999999999999999999
Q ss_pred CCCcEEEEecCchhhcccccc
Q 002275 515 HSGNISLLSKGADEAILPYAH 535 (944)
Q Consensus 515 ~~~~~~l~~KGa~e~i~~~~~ 535 (944)
+++.+.+|+|||||.|+++|+
T Consensus 69 ~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 69 NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred CCCEEEEEcCCChHHHHHhcC
Confidence 244677899999999999996
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.2e-12 Score=130.08 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=107.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecCCCHH-------HHHHHHHHHHHHh
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTED-------EVCRSLERVLLTM 683 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 683 (944)
++.+++.++|++|+++|++++++|||+...+..+++.+++..+ ..+|.++...+.... .............
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 5889999999999999999999999999999999999987543 223333333221110 0000000000000
Q ss_pred hcc-cCC-CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCcc
Q 002275 684 RIT-TSE-PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGN 755 (944)
Q Consensus 684 ~~~-~~~-~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~N 755 (944)
... ... .....+..+....+...+.+.+ ..+.... ...+.+++|. +|+..++.+.+. .+++++|||+.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~N 174 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEN 174 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 000 000 1112222233333332222221 1111111 1245677776 699988887663 356999999999
Q ss_pred chhhhhhcCeeEEecccchHHHhhhCcEeecccc
Q 002275 756 DVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (944)
Q Consensus 756 D~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~ 789 (944)
|++|++.|++|+|| +|+.+++|+.||+|+.+++
T Consensus 175 D~~ml~~ag~~vam-~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 175 DIDLFRVVGFKVAV-ANADDQLKEIADYVTSNPY 207 (215)
T ss_pred HHHHHHhCCCeEEc-CCccHHHHHhCCEEcCCCC
Confidence 99999999999999 9999999999999997543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.7e-11 Score=131.51 Aligned_cols=185 Identities=18% Similarity=0.150 Sum_probs=108.6
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEe--cCC-------CH
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI--DGK-------TE 669 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~--~~~-------~~ 669 (944)
|.|++. =...+.+.++++|++++++|++++++|||+...+..+++++++..+ ..+|.++.- ++. +.
T Consensus 11 DGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~ 87 (272)
T PRK10530 11 DGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPV 87 (272)
T ss_pred CCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCH
Confidence 555552 1235889999999999999999999999999999999999987543 123333331 121 11
Q ss_pred HHHHHHHHHHHHH-hhcc--c-------C-----------------------------------CCCcEEEEEcchh---
Q 002275 670 DEVCRSLERVLLT-MRIT--T-------S-----------------------------------EPKDVAFVVDGWA--- 701 (944)
Q Consensus 670 ~~~~~~~~~~~~~-~~~~--~-------~-----------------------------------~~~~~~lv~~~~~--- 701 (944)
+.....++..... .... . . ......+......
T Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 167 (272)
T PRK10530 88 QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQ 167 (272)
T ss_pred HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHH
Confidence 1111111111100 0000 0 0 0000111111111
Q ss_pred HHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchH
Q 002275 702 LEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (944)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (944)
.....+.+.+.+. +........+.++.|. +|+..++.+.+. .+++++|||+.||++|++.|++|||| ||+.+
T Consensus 168 ~~~~~~~~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~ 245 (272)
T PRK10530 168 LQHFAKHVEHELG-LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADD 245 (272)
T ss_pred HHHHHHHHhhhcC-ceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchH
Confidence 1111111111111 1111111124577776 598888776553 36799999999999999999999999 89999
Q ss_pred HHhhhCcEeeccccc
Q 002275 776 QAARAADYSIGKFRF 790 (944)
Q Consensus 776 ~~k~~Ad~v~~~~~~ 790 (944)
++++.||+|+.+++.
T Consensus 246 ~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 246 AVKARADLVIGDNTT 260 (272)
T ss_pred HHHHhCCEEEecCCC
Confidence 999999999976544
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.4e-10 Score=122.65 Aligned_cols=263 Identities=14% Similarity=0.197 Sum_probs=163.0
Q ss_pred HHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEec--CC------
Q 002275 596 QRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID--GK------ 667 (944)
Q Consensus 596 ~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~--~~------ 667 (944)
...-.+..|.|++....+.+.+....|+.|-++.|+.+..|-.+....+-+|.++|+...... -+.+. +.
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNC--HISLa~~~d~Pg~e~ 886 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNC--HISLAEEEDAPGREA 886 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccce--eEEeccCCCCCcccC
Confidence 344578999999999999999999999999999999999999999999999999999765432 11111 10
Q ss_pred --CHHHHHH---HHHHHHHHhhcccCCC----------CcEEE------------EEcchhHHHHHHHHHHHHHhhhhcc
Q 002275 668 --TEDEVCR---SLERVLLTMRITTSEP----------KDVAF------------VVDGWALEIALKHYRKAFTELAILS 720 (944)
Q Consensus 668 --~~~~~~~---~~~~~~~~~~~~~~~~----------~~~~l------------v~~~~~~~~~~~~~~~~~~~~~~~~ 720 (944)
.-+.... .+.+..+.....+.+. .-..+ ..+-..+.....+.+.|..++..+.
T Consensus 887 ~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVP 966 (1354)
T KOG4383|consen 887 GPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVP 966 (1354)
T ss_pred CCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcc
Confidence 0000000 1111111111111000 00000 0011111222233344444444433
Q ss_pred c-eeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccc--hhhhhhcCeeEEecccchH-------------HHhhhCc--
Q 002275 721 R-TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGND--VRMIQKADIGVGISGREGL-------------QAARAAD-- 782 (944)
Q Consensus 721 ~-~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND--~~ml~~A~vgIam~gn~~~-------------~~k~~Ad-- 782 (944)
- ...|.+++|+.--++++.+|++|++|++.|...|- .-.+-.||++||+-.-+.+ ..+.+.|
T Consensus 967 LLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandgl 1046 (1354)
T KOG4383|consen 967 LLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGL 1046 (1354)
T ss_pred eeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCC
Confidence 2 46789999999999999999999999999999884 4456779999986111100 0111222
Q ss_pred ---------------EeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHH
Q 002275 783 ---------------YSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMA 846 (944)
Q Consensus 783 ---------------~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 846 (944)
+-....+.++.. ++..+|....-+++.+.|.++..+++..++++-.++.. .++|+-.+++|
T Consensus 1047 splQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~L---P~i~s~sdii~ 1123 (1354)
T KOG4383|consen 1047 SPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFL---PIIFSHSDIIL 1123 (1354)
T ss_pred CceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc---cchhccchHHH
Confidence 222222334444 34567777777888888999988888887777655543 45688889999
Q ss_pred hhhhhhhhhHhhhhccC
Q 002275 847 YNVFYTSIPVLVSTIDK 863 (944)
Q Consensus 847 ~~~~~~~~~~~~~~~~~ 863 (944)
...+-..+..+.-++.+
T Consensus 1124 lScfc~PlL~i~tL~gk 1140 (1354)
T KOG4383|consen 1124 LSCFCIPLLFIGTLFGK 1140 (1354)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 88776655555434443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=130.31 Aligned_cols=182 Identities=15% Similarity=0.184 Sum_probs=105.3
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC-C--CCCCeEEEecC-----------
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG----------- 666 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~-~--~~~~~~~~~~~----------- 666 (944)
|.|++.- ...+.+.++++|++|+++|++++++|||+...+..+++++|+.. + ..+|..+...+
T Consensus 15 DGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~ 91 (271)
T PRK03669 15 DGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRI 91 (271)
T ss_pred ccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEe
Confidence 5555531 23466789999999999999999999999999999999999842 2 22333333221
Q ss_pred ---CCHHHHHHHHHHHHHHhhc--------------------------ccCCCCcEEEEEcchhHHHHHHHHHHHHH--h
Q 002275 667 ---KTEDEVCRSLERVLLTMRI--------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFT--E 715 (944)
Q Consensus 667 ---~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~lv~~~~~~~~~~~~~~~~~~--~ 715 (944)
-+.+.....++...+.... .........+...... .....+.+.+. .
T Consensus 92 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~ 169 (271)
T PRK03669 92 ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD--ERMAQFTARLAELG 169 (271)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH--HHHHHHHHHHHHCC
Confidence 1111112111111110000 0000001111221111 11111222222 1
Q ss_pred hhhccceeEEEEeChh--hHHHHHHHHhh-------cCCeEEEecCCccchhhhhhcCeeEEecccch-HH-----Hhhh
Q 002275 716 LAILSRTAICCRVTPS--QKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQ-----AARA 780 (944)
Q Consensus 716 ~~~~~~~~v~~~~~p~--~K~~iv~~l~~-------~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~-~~-----~k~~ 780 (944)
+.... ...+.+++|. +|+..++.+.+ ..++|++||||.||++||+.|++|||| ||.. +. .+..
T Consensus 170 ~~~~~-~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~ 247 (271)
T PRK03669 170 LQFVQ-GARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPA 247 (271)
T ss_pred CEEEe-cCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCC
Confidence 22122 2246799987 69987777755 446899999999999999999999999 6544 21 3347
Q ss_pred CcEeecccc
Q 002275 781 ADYSIGKFR 789 (944)
Q Consensus 781 Ad~v~~~~~ 789 (944)
||+++....
T Consensus 248 ~~~~~~~~~ 256 (271)
T PRK03669 248 RVYRTQREG 256 (271)
T ss_pred ceEeccCCC
Confidence 899887644
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.3e-11 Score=126.29 Aligned_cols=178 Identities=20% Similarity=0.284 Sum_probs=109.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEec-CCC-------HHHHHHHHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID-GKT-------EDEVCRSLERVLL 681 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~-~~~-------~~~~~~~~~~~~~ 681 (944)
.++.+++.++|++|+++|++++++|||+...+..+..++++..+ ..+|.++... +.. .+.....+.....
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999887533 2223333322 211 1112111111111
Q ss_pred H-hhc--c--------cC---------------------------CCCcEEEEEc-chhHHHHHHHHHH-HH-Hhhhhcc
Q 002275 682 T-MRI--T--------TS---------------------------EPKDVAFVVD-GWALEIALKHYRK-AF-TELAILS 720 (944)
Q Consensus 682 ~-~~~--~--------~~---------------------------~~~~~~lv~~-~~~~~~~~~~~~~-~~-~~~~~~~ 720 (944)
. ... . .. ......+... ....+...+.+.+ .+ ..+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 0 000 0 00 0000000111 1111111111211 11 1122222
Q ss_pred ceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 721 RTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 721 ~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+...+.+++|. +|+..++.+.+. .+.+++|||+.||++|++.|++|+|| +|+.+.+++.||+++.+++.
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADEELKALADYVTDSNNE 249 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchHHHHHhCCEEecCCCC
Confidence 33457789987 599999888764 36799999999999999999999999 89999999999999976543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-10 Score=123.74 Aligned_cols=173 Identities=13% Similarity=0.089 Sum_probs=102.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecCC--------------CHHHHHHHHH
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK--------------TEDEVCRSLE 677 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~--------------~~~~~~~~~~ 677 (944)
..+.++++|++|+++|++++++|||+...+..+.+++|+..+ ..+|.++...+. ..+.+...++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999997533 223333332211 1111111122
Q ss_pred HHHHHh--hc------------------------ccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh
Q 002275 678 RVLLTM--RI------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS 731 (944)
Q Consensus 678 ~~~~~~--~~------------------------~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 731 (944)
...... .. .........+..+.+......+.+.+ ..+.... ...+.++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-s~~~~ei~~~ 173 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVE--LGLEVTH-GNRFYHVLGA 173 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHH--cCCEEEe-CCceEEEecC
Confidence 111100 00 00000111111111111211111111 0111112 2246778886
Q ss_pred --hHHHHHHHHhh----c--CCeEEEecCCccchhhhhhcCeeEEecccch---HHHhhh--C-cEeeccccc
Q 002275 732 --QKAQLVELLKS----C--DYRTLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--A-DYSIGKFRF 790 (944)
Q Consensus 732 --~K~~iv~~l~~----~--~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~---~~~k~~--A-d~v~~~~~~ 790 (944)
+|+..++.+.+ . .+.+++|||+.||++||+.||+|||| +|+. +++|+. | ++|+.+++.
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na~~~~~~lk~~~~a~~~vt~~~~~ 245 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGPNGPNVSLKPGDPGSFLLTPAPGP 245 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCCCCCccccCccCCCcEEEcCCCCc
Confidence 58887776654 3 56799999999999999999999999 8887 468876 4 588866544
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=117.04 Aligned_cols=178 Identities=19% Similarity=0.191 Sum_probs=105.6
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecCC-----------
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK----------- 667 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~----------- 667 (944)
|.|++.- .+.+.++++++|++|+++|++++++|||+...+..+++++|+..+ ..+|.++...+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~ 88 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERL 88 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccc
Confidence 4555531 345778899999999999999999999999999999999998643 122333332111
Q ss_pred -----------CHHHHHHHHHHHHHHhh--c------------------------ccCCCCcEEEE-E-cchhHHHHHHH
Q 002275 668 -----------TEDEVCRSLERVLLTMR--I------------------------TTSEPKDVAFV-V-DGWALEIALKH 708 (944)
Q Consensus 668 -----------~~~~~~~~~~~~~~~~~--~------------------------~~~~~~~~~lv-~-~~~~~~~~~~~ 708 (944)
..+.....++....... . .........++ . +....+...+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
T PRK00192 89 KGDYWVIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEA 168 (273)
T ss_pred cCCceEEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHH
Confidence 11111111111111000 0 00000000111 1 11122222111
Q ss_pred HHHHHHhhhhccceeEEEEeChh-hHHHHHHHHhh----cC-CeEEEecCCccchhhhhhcCeeEEecccchHHHh----
Q 002275 709 YRKAFTELAILSRTAICCRVTPS-QKAQLVELLKS----CD-YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA---- 778 (944)
Q Consensus 709 ~~~~~~~~~~~~~~~v~~~~~p~-~K~~iv~~l~~----~~-~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k---- 778 (944)
+ +.. .+.... ...+.++.|. +|+..++.+.+ .. +.|++|||+.||++|++.|++|+|| +|+.+++|
T Consensus 169 l-~~~-~~~~~~-~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam-~NA~~~~k~~~~ 244 (273)
T PRK00192 169 L-KRL-GLKVTR-GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV-PGPDGPNPPLLP 244 (273)
T ss_pred H-HHc-CCEEEE-CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe-CCCCCCCcccCc
Confidence 1 111 111111 2346677776 68888877764 36 8999999999999999999999999 99999999
Q ss_pred hhC-cEee
Q 002275 779 RAA-DYSI 785 (944)
Q Consensus 779 ~~A-d~v~ 785 (944)
.+| +.++
T Consensus 245 ~~a~~~v~ 252 (273)
T PRK00192 245 GIADGEFI 252 (273)
T ss_pred cccCCceE
Confidence 666 6777
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.04 E-value=1e-09 Score=114.68 Aligned_cols=165 Identities=19% Similarity=0.265 Sum_probs=98.2
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCH--------HHHH-H---------HHHHHH
Q 002275 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------DEVC-R---------SLERVL 680 (944)
Q Consensus 619 ~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~--------~~~~-~---------~~~~~~ 680 (944)
.++++ ++++|++++++|||+...+..+...+++..++ .++..+|..+ .... . .+....
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~---~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD---VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEAL 96 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC---EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHH
Confidence 36666 69999999999999999999999999875331 1223333221 1100 0 111111
Q ss_pred HHhh---cccCC---CCcEEEEEcchhHHHHHHHHHHHHHhhh----hccceeEEEEeChh--hHHHHHHHHhhc----C
Q 002275 681 LTMR---ITTSE---PKDVAFVVDGWALEIALKHYRKAFTELA----ILSRTAICCRVTPS--QKAQLVELLKSC----D 744 (944)
Q Consensus 681 ~~~~---~~~~~---~~~~~lv~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~p~--~K~~iv~~l~~~----~ 744 (944)
.... ..... ..+..+........ ..+...+.+.... .......+.++.|. +|+..++.+.+. .
T Consensus 97 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 97 ADIPGLTLQDDQEQGPFKISYLLDPEGEP-ILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred hcCCCcEeCChhcCCCeeEEEEECcccch-HHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 1111 00111 12233333332111 1111222221111 11112233578886 699999888763 3
Q ss_pred CeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCc----Eeecccc
Q 002275 745 YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD----YSIGKFR 789 (944)
Q Consensus 745 ~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad----~v~~~~~ 789 (944)
..+++|||+.||++||+.+++||+| +|+.+++|+.|| +|+.+++
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~~~~~~v~~~~~ 223 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRHQQRIYFANNPH 223 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhcCCcEEEcCCCC
Confidence 4799999999999999999999999 999999999999 7776543
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.9e-09 Score=112.16 Aligned_cols=171 Identities=16% Similarity=0.208 Sum_probs=105.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC----CCCeEEEecCCCHH-HHH----------HH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTED-EVC----------RS 675 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~----~~~~~~~~~~~~~~-~~~----------~~ 675 (944)
..+..|.+.+++++++++|+.++++|||+...+..+.+++++..+. .+|..+...+.... ... ..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567789999999999999999999999999999999988876552 23334433331111 100 00
Q ss_pred HHHHHHHhhc---c---cCCCCcEEEEEcchhHHHHHHHHHHHHHhh----hhccceeEEEEeChh--hHHHHHHHHhhc
Q 002275 676 LERVLLTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTEL----AILSRTAICCRVTPS--QKAQLVELLKSC 743 (944)
Q Consensus 676 ~~~~~~~~~~---~---~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~p~--~K~~iv~~l~~~ 743 (944)
+......... . .....+..+.............+.+.+... ........+.++.|. +|+..++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 1111111110 0 011122333333333222233333333221 111222345688876 699999888663
Q ss_pred ----CCeEEEecCCccchhhhhh-cCeeEEecccchHHHhhhCc
Q 002275 744 ----DYRTLAIGDGGNDVRMIQK-ADIGVGISGREGLQAARAAD 782 (944)
Q Consensus 744 ----~~~v~~iGDg~ND~~ml~~-A~vgIam~gn~~~~~k~~Ad 782 (944)
.+.|+++||+.||++|++. ++.|||| +|+.+++++.++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~k~~~~ 221 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEELLQWYD 221 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHHHHHHH
Confidence 4689999999999999998 6799999 999999987543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.4e-09 Score=117.70 Aligned_cols=167 Identities=18% Similarity=0.188 Sum_probs=103.2
Q ss_pred cCCChHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC----CCCeEEEecCCCHH-HHHH-HH---------H
Q 002275 614 LQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTED-EVCR-SL---------E 677 (944)
Q Consensus 614 lr~~~~~aI-~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~----~~~~~~~~~~~~~~-~~~~-~~---------~ 677 (944)
+.+....++ ++++++|+.++++|||+...+..+.++.++..++ .+|..+...+.... .... .+ .
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333345556 8899999999999999999999999999987763 13333333221111 1110 00 0
Q ss_pred HHHHHhh-cc-----cCCCCcEEEEEcchhHHHHHHHHHHHHHh----hhhccceeEEEEeChh--hHHHHHHHHhhc--
Q 002275 678 RVLLTMR-IT-----TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC-- 743 (944)
Q Consensus 678 ~~~~~~~-~~-----~~~~~~~~lv~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~p~--~K~~iv~~l~~~-- 743 (944)
.....+. .. .....+..+..+........+.+.+.+.. +....+...+.++.|. +|+..++.|.+.
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 1111110 00 01112333444433333444444444432 1122233457899987 599988888654
Q ss_pred -----CCeEEEecCCccchhhhhhcC-eeEEecccchHHHhhhC
Q 002275 744 -----DYRTLAIGDGGNDVRMIQKAD-IGVGISGREGLQAARAA 781 (944)
Q Consensus 744 -----~~~v~~iGDg~ND~~ml~~A~-vgIam~gn~~~~~k~~A 781 (944)
.+++++|||+.||++||+.|+ +|||| +|+.+++|+.|
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam-~NA~~elk~~a 231 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV-SNAQEELLQWY 231 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE-cCCcHHHHHHH
Confidence 358999999999999999999 79999 99999999853
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.8e-09 Score=103.31 Aligned_cols=99 Identities=19% Similarity=0.224 Sum_probs=80.2
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcc
Q 002275 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (944)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~ 699 (944)
.+|+.|+++|+++.++|+.+...+....+.+|+...
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~-------------------------------------------- 76 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF-------------------------------------------- 76 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE--------------------------------------------
Confidence 489999999999999999999999999999998311
Q ss_pred hhHHHHHHHHHHHHHhhhhccceeEEEEe--ChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHH
Q 002275 700 WALEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777 (944)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~ 777 (944)
|... .|+....+++.++...+++++|||+.||++|++.|++++|| +|+.+++
T Consensus 77 -------------------------f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~l 130 (169)
T TIGR02726 77 -------------------------HEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADV 130 (169)
T ss_pred -------------------------EecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHH
Confidence 1111 13334445555554557899999999999999999999999 9999999
Q ss_pred hhhCcEeeccc
Q 002275 778 ARAADYSIGKF 788 (944)
Q Consensus 778 k~~Ad~v~~~~ 788 (944)
+..|++|+.+.
T Consensus 131 k~~A~~I~~~~ 141 (169)
T TIGR02726 131 KEAAAYVTTAR 141 (169)
T ss_pred HHhCCEEcCCC
Confidence 99999998643
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.3e-09 Score=108.31 Aligned_cols=60 Identities=22% Similarity=0.240 Sum_probs=50.3
Q ss_pred EEEEeChh--hHHHHHHHHhhcCCeEEEecC----Cccchhhhhhc-CeeEEecccchHHHhhhCcEe
Q 002275 724 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKA-DIGVGISGREGLQAARAADYS 784 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~A-~vgIam~gn~~~~~k~~Ad~v 784 (944)
.+.+++|. +|+..++.|.+..++|++||| |.||++||+.| -.|+++ +|+.+.+|..|.++
T Consensus 178 ~~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v-~n~~~~~~~~~~~~ 244 (247)
T PTZ00174 178 ISFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSV-KNPEDTIKILKELF 244 (247)
T ss_pred eEEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEe-CCHHHHHHHHHHHh
Confidence 57799997 699999999888889999999 99999999976 566777 68888787766543
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.2e-09 Score=112.15 Aligned_cols=123 Identities=24% Similarity=0.275 Sum_probs=89.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|++++++||.....+..+.+++|+...-.+ .+...+|.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an-~lei~dg~------------------------- 234 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN-ELEIMDGK------------------------- 234 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe-EEEEECCE-------------------------
Confidence 5889999999999999999999999998888888888887431110 00000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEE-EeChhhHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
++ ..+.. -+..+.|.+.++.+.+. .++++++|||.||++|++.||+||
T Consensus 235 ----lt-----------------------g~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 235 ----LT-----------------------GNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred ----EE-----------------------eEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeE
Confidence 00 00000 12345788878777653 468999999999999999999999
Q ss_pred EecccchHHHhhhCcEeeccccc
Q 002275 768 GISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 768 am~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
|| |+.+.+++.||+++...+.
T Consensus 288 A~--nAkp~Vk~~Ad~~i~~~~l 308 (322)
T PRK11133 288 AY--HAKPKVNEQAQVTIRHADL 308 (322)
T ss_pred Ee--CCCHHHHhhCCEEecCcCH
Confidence 99 7888899999999975444
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.5e-08 Score=102.12 Aligned_cols=153 Identities=19% Similarity=0.227 Sum_probs=87.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC-CC--CCCCeEEEe-cC-------------CCHHHHHHHH
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-SP--EPKGQLLSI-DG-------------KTEDEVCRSL 676 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~-~~--~~~~~~~~~-~~-------------~~~~~~~~~~ 676 (944)
..+.++++|++|+++|++++++|||+...+..+.+.+|+. .+ ..+|..+.. .+ ...+.....+
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 96 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEPGYPRIILGISYGIIRLVL 96 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHHHH
Confidence 3344899999999999999999999999999999999975 22 122323321 11 1111111112
Q ss_pred HHHHHHhhc--------------------------ccCCCCcEEEEE--cchhHHHHHHHHHHHHHhhhhccceeEEEEe
Q 002275 677 ERVLLTMRI--------------------------TTSEPKDVAFVV--DGWALEIALKHYRKAFTELAILSRTAICCRV 728 (944)
Q Consensus 677 ~~~~~~~~~--------------------------~~~~~~~~~lv~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 728 (944)
+...+.... .........+.. +.+..+...+.+ +.. .+.... ...+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~-~~~~~~-~~~~~ei 173 (221)
T TIGR02463 97 ETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALL-ADL-GLAIVQ-GNRFSHV 173 (221)
T ss_pred HHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHH-HHc-CCeEEe-cCCeeEE
Confidence 111111000 000011112222 122222222211 111 121111 2456788
Q ss_pred Chh--hHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 729 TPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 729 ~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
.|. +|+..++.+.+ ..+.|++|||+.||++||+.||+|||+
T Consensus 174 ~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 174 LGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred ecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 887 59887777655 356899999999999999999999997
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=102.23 Aligned_cols=113 Identities=23% Similarity=0.187 Sum_probs=84.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEec-CCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID-GKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++.|++.+.|+.+++.| +++++||-....+.++++.+|+...-.+ .+..-+ |
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an-~l~~~~~g------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDSD------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce-eeEEecCC-------------------------
Confidence 57999999999999985 9999999999999999999998532111 000000 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
.++| .. ...+..|...++.+++.+..++++|||.||++|++.||+||++
T Consensus 121 ----~~tG----------------------~~---~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~-- 169 (203)
T TIGR02137 121 ----RVVG----------------------YQ---LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-- 169 (203)
T ss_pred ----eeEC----------------------ee---ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe--
Confidence 0000 00 1246689999999988887899999999999999999999999
Q ss_pred cchHHHhhhCcE
Q 002275 772 REGLQAARAADY 783 (944)
Q Consensus 772 n~~~~~k~~Ad~ 783 (944)
++.+.++++||-
T Consensus 170 ~ak~~~~~~~~~ 181 (203)
T TIGR02137 170 HAPENVIREFPQ 181 (203)
T ss_pred cCCHHHHHhCCC
Confidence 445557777754
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.8e-08 Score=111.87 Aligned_cols=157 Identities=15% Similarity=0.189 Sum_probs=91.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEe----------------------cCCCH
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI----------------------DGKTE 669 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~----------------------~~~~~ 669 (944)
..+.++++|++|+++|+.++++|||+...+..+++++++..+ ..+|..+.. .+.+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~ 513 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAY 513 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCH
Confidence 556789999999999999999999999999999999986422 112223322 22222
Q ss_pred HHHHHHHHHHHHHhh-------------ccc--C----------------------CCCcEEEEEcc--hhHHHHHHHHH
Q 002275 670 DEVCRSLERVLLTMR-------------ITT--S----------------------EPKDVAFVVDG--WALEIALKHYR 710 (944)
Q Consensus 670 ~~~~~~~~~~~~~~~-------------~~~--~----------------------~~~~~~lv~~~--~~~~~~~~~~~ 710 (944)
+.+...++...+... ... . ......+...+ +.++...+.+.
T Consensus 514 e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~ 593 (694)
T PRK14502 514 KDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQ 593 (694)
T ss_pred HHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHH
Confidence 223322222222110 000 0 00001122222 22222222222
Q ss_pred HHHHhhhhccceeEEEEeChh-hHHHHHHHHhhc----CCeEEEe--cCCccchhhhhhcCeeEEecccc
Q 002275 711 KAFTELAILSRTAICCRVTPS-QKAQLVELLKSC----DYRTLAI--GDGGNDVRMIQKADIGVGISGRE 773 (944)
Q Consensus 711 ~~~~~~~~~~~~~v~~~~~p~-~K~~iv~~l~~~----~~~v~~i--GDg~ND~~ml~~A~vgIam~gn~ 773 (944)
+. .+... ....|.++.+. +|+..++.|.+. .+.+++| |||.||++||+.||+||||.+..
T Consensus 594 ~~--~l~v~-~g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~ 660 (694)
T PRK14502 594 QS--GLEYS-FGGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPG 660 (694)
T ss_pred Hc--CcEEE-ECCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCC
Confidence 21 12212 25567778754 699999988764 3467777 99999999999999999995443
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.8e-08 Score=102.00 Aligned_cols=122 Identities=23% Similarity=0.234 Sum_probs=88.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.+++|++.+.++.++++|++++++||-...-+.++++.+|+...-.+. +...+|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~-l~~~dG------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANE-LEIDDG------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeE-EEEeCC-------------------------
Confidence 789999999999999999999999999999999999999996543220 110111
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh-cC---CeEEEecCCccchhhhhhcCeeE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~-~~---~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
..+| ..+.-.+..+.|...++.+.+ .| +.+.++|||.||.|||+.||.+|
T Consensus 130 ----~ltG----------------------~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~i 183 (212)
T COG0560 130 ----KLTG----------------------RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPI 183 (212)
T ss_pred ----EEec----------------------eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCe
Confidence 0011 112223344678887766554 33 46999999999999999999999
Q ss_pred EecccchHHHhhhCcEeecc
Q 002275 768 GISGREGLQAARAADYSIGK 787 (944)
Q Consensus 768 am~gn~~~~~k~~Ad~v~~~ 787 (944)
+. |..+.+.+.|+.....
T Consensus 184 a~--n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 184 AV--NPKPKLRALADVRIWP 201 (212)
T ss_pred Ee--CcCHHHHHHHHHhcCh
Confidence 99 4455566666655443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.4e-08 Score=99.67 Aligned_cols=44 Identities=9% Similarity=0.073 Sum_probs=39.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~ 654 (944)
.+...++++++|++|+++|++++++|||+...+..+..++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45667789999999999999999999999999999999999743
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.9e-08 Score=103.22 Aligned_cols=175 Identities=18% Similarity=0.197 Sum_probs=101.1
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEE-ecCC-----CHHHHHHHHHHHHHH-hh
Q 002275 613 RLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGK-----TEDEVCRSLERVLLT-MR 684 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~-~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~-~~ 684 (944)
.+.++++++|++|++ .|+.++++|||+...+..+...+++.-...+|..+. ..+. ...+....+...... ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 899999999999999988887666321122222222 1111 001111111111111 10
Q ss_pred ---cccCCCCcEEEEEcchh---HHHHHHHHHHHHHh---hhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEE
Q 002275 685 ---ITTSEPKDVAFVVDGWA---LEIALKHYRKAFTE---LAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLA 749 (944)
Q Consensus 685 ---~~~~~~~~~~lv~~~~~---~~~~~~~~~~~~~~---~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~ 749 (944)
...-+.+...++..... .......+.+.+.. .....+...+.++.|. +|+..++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 11111222233322211 11111122212111 1122234567788887 699988877654 467999
Q ss_pred ecCCccchhhhhhc----CeeEEecccchHHHhhhCcEeeccccchh
Q 002275 750 IGDGGNDVRMIQKA----DIGVGISGREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 750 iGDg~ND~~ml~~A----~vgIam~gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
+||+.||.+||+.+ ++||+| ||+. ..|++.+.+-....
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vav-g~a~----~~A~~~l~~~~~v~ 237 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKV-GTGA----TQASWRLAGVPDVW 237 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEE-CCCC----CcCeEeCCCHHHHH
Confidence 99999999999999 999999 8864 34788777655443
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.2e-08 Score=95.46 Aligned_cols=96 Identities=21% Similarity=0.154 Sum_probs=75.8
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcch
Q 002275 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (944)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 700 (944)
+|++|+++|+++.|+||++...+..+.+.+|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999987311
Q ss_pred hHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHH----HHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHH
Q 002275 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (944)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv----~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (944)
+.. ...|...+ +.+....+.++++||+.||++|++.|+++++| .++.+.
T Consensus 71 ------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v-~~~~~~ 123 (154)
T TIGR01670 71 ------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAV-ADAHPL 123 (154)
T ss_pred ------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEec-CCcCHH
Confidence 000 12233333 33333456899999999999999999999999 777777
Q ss_pred HhhhCcEeeccc
Q 002275 777 AARAADYSIGKF 788 (944)
Q Consensus 777 ~k~~Ad~v~~~~ 788 (944)
++..||+++.+.
T Consensus 124 ~~~~a~~i~~~~ 135 (154)
T TIGR01670 124 LIPRADYVTRIA 135 (154)
T ss_pred HHHhCCEEecCC
Confidence 888999999754
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.2e-08 Score=99.01 Aligned_cols=100 Identities=14% Similarity=0.168 Sum_probs=79.1
Q ss_pred cchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcc-
Q 002275 837 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY- 915 (944)
Q Consensus 837 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 915 (944)
.++++.|++|+|++.|.+|++++++| |+++++|++||+ .+++.+++.+++...+..+++++++.++..+.....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e--~~~~~im~r~Pr---~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFE--PPDPDIMKRPPR---DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGS--S-STTGGGS------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcC--cchhhhhhcccc---ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 35899999999999999999999988 689999999995 788999999999999889999999888877766552
Q ss_pred cCcc------hhhhhHHHHHHHHHHHHHhhhe
Q 002275 916 EKSE------MEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 916 ~~~~------~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
+... ....+|++|++++++|+++.+.
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~ 108 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFN 108 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhcc
Confidence 3222 2358999999999999998753
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=5e-08 Score=88.65 Aligned_cols=97 Identities=22% Similarity=0.206 Sum_probs=80.3
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcc
Q 002275 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (944)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~ 699 (944)
..|+.+.+.|+++.++|||+...+..=|+++|+..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999821
Q ss_pred hhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCeeEEecccchH
Q 002275 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (944)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (944)
+|. -..+|....+.|.. ..++|+++||..||.|+|+.+++++|. .++++
T Consensus 77 ------------------------~~q--G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~ 129 (170)
T COG1778 77 ------------------------LYQ--GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHP 129 (170)
T ss_pred ------------------------eee--chHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCH
Confidence 111 13456665555544 357899999999999999999999999 89999
Q ss_pred HHhhhCcEeeccc
Q 002275 776 QAARAADYSIGKF 788 (944)
Q Consensus 776 ~~k~~Ad~v~~~~ 788 (944)
.+++.||+|+...
T Consensus 130 ~v~~~a~~Vt~~~ 142 (170)
T COG1778 130 LLKQRADYVTSKK 142 (170)
T ss_pred HHHHhhHhhhhcc
Confidence 9999999999753
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.58 E-value=1e-07 Score=97.38 Aligned_cols=157 Identities=22% Similarity=0.247 Sum_probs=87.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCH--------HHHHHHHHHHHHHhh
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------DEVCRSLERVLLTMR 684 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 684 (944)
++.+.+.++|++|+++|++++++|||+...+..+...++..--..+|..+...+... .+.....+.....+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 578899999999999999999999999999999988754211122233333322211 111100011000000
Q ss_pred cc-------cCCCCc--EEEEEcch-hHHHHHHHHHHHHHh-------hhhccceeEEEEeChh--hHHHHHHHHhhc--
Q 002275 685 IT-------TSEPKD--VAFVVDGW-ALEIALKHYRKAFTE-------LAILSRTAICCRVTPS--QKAQLVELLKSC-- 743 (944)
Q Consensus 685 ~~-------~~~~~~--~~lv~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~p~--~K~~iv~~l~~~-- 743 (944)
.. ..+.+. ..+...+. ..........+.... +....+...+.++.|. +|+..++.+.+.
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 00 001111 11211111 011111111111111 1111134456788885 699988887654
Q ss_pred --CCeEEEecCCccchhhhhhcCeeEEe
Q 002275 744 --DYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 744 --~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
...++++||+.||.+|++.+++||||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 35799999999999999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.3e-07 Score=93.08 Aligned_cols=45 Identities=9% Similarity=0.117 Sum_probs=39.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~ 655 (944)
.+...+.++++|++|+++||.++++|||....+..+.+++++..+
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 345677899999999999999999999999999999999998543
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2e-07 Score=92.80 Aligned_cols=96 Identities=20% Similarity=0.145 Sum_probs=75.1
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcc
Q 002275 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (944)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~ 699 (944)
.+|+.|+++|+++.++||++...+..+++++|+...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------------------- 90 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------------------- 90 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------------------
Confidence 699999999999999999999999999999987311
Q ss_pred hhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHH----hhcCCeEEEecCCccchhhhhhcCeeEEecccchH
Q 002275 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL----KSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (944)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l----~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (944)
|. ..+.|...++.+ +-..++++++||+.||++|++.|++++++ +++.+
T Consensus 91 -------------------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~ 142 (183)
T PRK09484 91 -------------------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHP 142 (183)
T ss_pred -------------------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhH
Confidence 00 112344434333 33346899999999999999999999998 77767
Q ss_pred HHhhhCcEeecc
Q 002275 776 QAARAADYSIGK 787 (944)
Q Consensus 776 ~~k~~Ad~v~~~ 787 (944)
..+..||+++..
T Consensus 143 ~~~~~a~~v~~~ 154 (183)
T PRK09484 143 LLLPRADYVTRI 154 (183)
T ss_pred HHHHhCCEEecC
Confidence 677789999963
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.51 E-value=4e-07 Score=94.17 Aligned_cols=125 Identities=25% Similarity=0.329 Sum_probs=86.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++++.++.|+++|+++.++||.....+..+.+.+|+...-.. .+...++.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~-~~~~~~~~------------------------- 138 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN-RLEVEDGK------------------------- 138 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee-EEEEECCE-------------------------
Confidence 5899999999999999999999999999999999999988432110 00000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEE-eChhhHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
++ ..+..+ ..+..|..+++.+.+. .+.++++||+.+|++|++.||+++
T Consensus 139 ----~~-----------------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 139 ----LT-----------------------GLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred ----EE-----------------------EEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 00 000001 1223366666654432 357999999999999999999999
Q ss_pred EecccchHHHhhhCcEeeccccchh
Q 002275 768 GISGREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 768 am~gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
++. +.+.+.++||+++.+.++..
T Consensus 192 ~~~--~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 192 AFN--AKPKLQQKADICINKKDLTD 214 (219)
T ss_pred EeC--CCHHHHHhchhccCCCCHHH
Confidence 993 34557779999998776543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.7e-06 Score=100.74 Aligned_cols=186 Identities=17% Similarity=0.141 Sum_probs=104.7
Q ss_pred ccceEeeEecc--ccccCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCC-------H
Q 002275 600 HDLKVLGVTAI--EDRLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT-------E 669 (944)
Q Consensus 600 ~~l~~lG~i~~--~d~lr~~~~~aI~~l~~-~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-------~ 669 (944)
-|.|++....- ...+.+++.++|++|.+ .|+.|+++|||+...........++.--..+|..+...+.. .
T Consensus 499 ~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~ 578 (726)
T PRK14501 499 YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVA 578 (726)
T ss_pred cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcc
Confidence 35555543211 12467899999999999 69999999999999888776655431112223333322221 0
Q ss_pred HHHHHHHHHHHHHhhc----ccCCCCcEEEEEc--c--hhHH-HHHHHHHHHHHhhh-----hccceeEEEEeChh--hH
Q 002275 670 DEVCRSLERVLLTMRI----TTSEPKDVAFVVD--G--WALE-IALKHYRKAFTELA-----ILSRTAICCRVTPS--QK 733 (944)
Q Consensus 670 ~~~~~~~~~~~~~~~~----~~~~~~~~~lv~~--~--~~~~-~~~~~~~~~~~~~~-----~~~~~~v~~~~~p~--~K 733 (944)
................ ...+.+...+... . ..+. ...++..+++.... .......+.++.|. +|
T Consensus 579 ~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnK 658 (726)
T PRK14501 579 TEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNK 658 (726)
T ss_pred hhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCH
Confidence 1111222222222111 1111122333322 1 1111 11122222222211 11123445688886 69
Q ss_pred HHHHHHHhhc--CCeEEEecCCccchhhhhhc---CeeEEecccchHHHhhhCcEeeccccc
Q 002275 734 AQLVELLKSC--DYRTLAIGDGGNDVRMIQKA---DIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 734 ~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A---~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+..++.+.+. ...++++||+.||.+||+.+ +++|+| ||. +..|++.+.+.+.
T Consensus 659 G~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~v-G~~----~s~A~~~l~~~~e 715 (726)
T PRK14501 659 GRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKV-GPG----ESRARYRLPSQRE 715 (726)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEE-CCC----CCcceEeCCCHHH
Confidence 9999988864 35799999999999999996 688999 774 3578999987654
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.7e-06 Score=84.86 Aligned_cols=109 Identities=31% Similarity=0.356 Sum_probs=76.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.|+.|+++|+++.++||.....+..+++.+|+...-.. .+..++.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~------------------------- 132 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN--ELVFDEK------------------------- 132 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE--EEEEcCC-------------------------
Confidence 5899999999999999999999999999999999999986321100 0000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVG 768 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIa 768 (944)
+ ......+....|..|..+++.+.+. .+.++++||+.||++|++.||++++
T Consensus 133 ------g-------------------~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 133 ------G-------------------FIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred ------C-------------------eEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 0 0001111223456677766665432 4579999999999999999999999
Q ss_pred ecccch
Q 002275 769 ISGREG 774 (944)
Q Consensus 769 m~gn~~ 774 (944)
+ +..+
T Consensus 188 ~-~~~~ 192 (201)
T TIGR01491 188 L-GDEG 192 (201)
T ss_pred E-CCCc
Confidence 9 4433
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.23 E-value=1e-05 Score=84.59 Aligned_cols=49 Identities=27% Similarity=0.414 Sum_probs=42.8
Q ss_pred EEEEeChh--hHHHHHHHHhhcCCeEEEecC----Cccchhhhhh-cCeeEEecccc
Q 002275 724 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQK-ADIGVGISGRE 773 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~-A~vgIam~gn~ 773 (944)
.+.+++|. +|+..++.|+ ..++|++||| |.||++||+. .-.|+++++-+
T Consensus 179 ~~iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 68899988 6999999999 7889999999 8999999996 77788885543
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=9.1e-06 Score=83.01 Aligned_cols=123 Identities=23% Similarity=0.236 Sum_probs=85.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++ +++.++||.....+..+...+|+...-.+ .....+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDEDG------------------------ 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCCC------------------------
Confidence 4679999999999999 99999999999999999999997422110 00000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEE-eChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
...... ..|..|...++.++..+..++++|||.||++|.+.|++|++. +
T Consensus 121 -----------------------------~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~-~ 170 (205)
T PRK13582 121 -----------------------------MITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF-R 170 (205)
T ss_pred -----------------------------eEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE-C
Confidence 000001 135678888888888888999999999999999999999987 4
Q ss_pred cchHHHhhhCcE-eeccccchh
Q 002275 772 REGLQAARAADY-SIGKFRFLK 792 (944)
Q Consensus 772 n~~~~~k~~Ad~-v~~~~~~l~ 792 (944)
.........+++ ++.+...+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~el~ 192 (205)
T PRK13582 171 PPANVIAEFPQFPAVHTYDELL 192 (205)
T ss_pred CCHHHHHhCCcccccCCHHHHH
Confidence 432222234555 666655443
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.3e-06 Score=80.66 Aligned_cols=106 Identities=22% Similarity=0.326 Sum_probs=76.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEE--EecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL--SIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
.+.|++++.++.|++.|.++.++||--...+.++|.++||...+..-... ..+|+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 57799999999999999999999999999999999999996532110000 011100
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEe----ChhhHHHHHHHHhhc--CCeEEEecCCccchhhhhhcC
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~ 764 (944)
.-|-.. ....|+++++.+++. .+.++|+|||.||++|+..|+
T Consensus 146 --------------------------------~gfd~~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 146 --------------------------------LGFDTNEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred --------------------------------cccccCCccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchh
Confidence 000011 122599999999874 457899999999999999977
Q ss_pred eeEEeccc
Q 002275 765 IGVGISGR 772 (944)
Q Consensus 765 vgIam~gn 772 (944)
.=|+..||
T Consensus 194 afi~~~g~ 201 (227)
T KOG1615|consen 194 AFIGFGGN 201 (227)
T ss_pred hhhccCCc
Confidence 66666444
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.3e-05 Score=83.91 Aligned_cols=154 Identities=19% Similarity=0.304 Sum_probs=89.5
Q ss_pred HHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCC----CCeEEEe--cCCCHHHHHH---------HHHHHHHHhhc-
Q 002275 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSI--DGKTEDEVCR---------SLERVLLTMRI- 685 (944)
Q Consensus 622 I~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~----~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~- 685 (944)
++...+.++.++++|||+...+..+..+.++..|+. .|.-+.. +......-.. .+......+..
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 333457788999999999999999999999865521 1222222 1111111111 11222222110
Q ss_pred -----ccCCCCcEEEEEcchhHHHHHHHHHHHHHhhh----hccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEe
Q 002275 686 -----TTSEPKDVAFVVDGWALEIALKHYRKAFTELA----ILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAI 750 (944)
Q Consensus 686 -----~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~i 750 (944)
......+....+.........+.+.+.+..-. ...+...+.++.|. +|+..++.+++. .+.|+++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 11123355555555554444444444433211 12223346788887 699999999875 3579999
Q ss_pred cCCccchhhhhhcCeeEEecccchHH
Q 002275 751 GDGGNDVRMIQKADIGVGISGREGLQ 776 (944)
Q Consensus 751 GDg~ND~~ml~~A~vgIam~gn~~~~ 776 (944)
||+.||.+||..++.||.+ +|+.++
T Consensus 188 GDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred eCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 9999999999999999999 898877
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.9e-05 Score=80.57 Aligned_cols=132 Identities=21% Similarity=0.328 Sum_probs=81.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+.....-...+.+....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 47899999999999999999999999999999999999984210000000000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc--CCeEEEecCCccchhhhhhc--CeeEE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKA--DIGVG 768 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A--~vgIa 768 (944)
.+.|. ..... ......|...++.+.+. .+.++++||+.||+.|.+.+ +++++
T Consensus 140 ---~~~g~-------------------~~~~~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~ 195 (224)
T PLN02954 140 ---EYAGF-------------------DENEP--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIG 195 (224)
T ss_pred ---cEECc-------------------cCCCc--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEe
Confidence 00000 00000 01123477777766553 35799999999999998884 55455
Q ss_pred ecccc-hHHHhhhCcEeeccccchh
Q 002275 769 ISGRE-GLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 769 m~gn~-~~~~k~~Ad~v~~~~~~l~ 792 (944)
..+.. .+.....||+++.+.+.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~i~~~~el~ 220 (224)
T PLN02954 196 YGGVQVREAVAAKADWFVTDFQDLI 220 (224)
T ss_pred cCCCccCHHHHhcCCEEECCHHHHH
Confidence 42222 2223446899988765543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.6e-05 Score=80.33 Aligned_cols=92 Identities=25% Similarity=0.288 Sum_probs=67.0
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEE
Q 002275 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (944)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (944)
+++.+.|+.++++|++++|+||.+...+.++++.+|+.... ++...-
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~----v~~~~~----------------------------- 138 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN----VIGNEL----------------------------- 138 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG----EEEEEE-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----EEEEee-----------------------------
Confidence 66669999999999999999999999999999999985321 100000
Q ss_pred EEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh---hHHHHHHHH------hhcCCeEEEecCCccchhhhh
Q 002275 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS---QKAQLVELL------KSCDYRTLAIGDGGNDVRMIQ 761 (944)
Q Consensus 696 v~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~---~K~~iv~~l------~~~~~~v~~iGDg~ND~~ml~ 761 (944)
.+ ........++++. .|...++.+ +.....++++|||.||++|||
T Consensus 139 -~~--------------------~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 139 -FD--------------------NGGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -EC--------------------TTCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred -ee--------------------cccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 00 0002233444444 399999999 345778999999999999996
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.5e-05 Score=78.32 Aligned_cols=112 Identities=14% Similarity=0.148 Sum_probs=74.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....-..... ..++...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~-~~~~~~~---------------------- 125 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEA-DFSNEYI---------------------- 125 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEecee-EeeCCee----------------------
Confidence 47999999999999999999999999999888888887643211000000 0111000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEE-EEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
.... -.+.... ..-....|..+++.++...+.++++|||.||++|++.||+.+|-
T Consensus 126 ----~~~~-------------------p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 126 ----HIDW-------------------PHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred ----EEeC-------------------CCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEeh
Confidence 0000 0000000 00012368999998887778899999999999999999997775
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.92 E-value=8.6e-05 Score=77.82 Aligned_cols=176 Identities=15% Similarity=0.127 Sum_probs=93.0
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHH--HcCCCCCCCCCeEEEecCCCH------------HHHHHHHH
Q 002275 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTE------------DEVCRSLE 677 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~~~------------~~~~~~~~ 677 (944)
.+.+++.++|++|.+. +..++++|||+...+..... .+++... .|..+..+|... .+....+.
T Consensus 25 ~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~--hG~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 102 (244)
T TIGR00685 25 VVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGE--HGCEMKDNGSCQDWVNLTEKIPSWKVRANELR 102 (244)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEee--cCEEEecCCCcceeeechhhhhhHHHHHHHHH
Confidence 3568899999999776 45788999998766544321 1112211 121222222211 11111122
Q ss_pred HHHHHhhcccCCCCcEEEEEcch---hHHHHHHHHHHHHHhhh-----hccceeEEEEeChh--hHHHHHHHHhhc----
Q 002275 678 RVLLTMRITTSEPKDVAFVVDGW---ALEIALKHYRKAFTELA-----ILSRTAICCRVTPS--QKAQLVELLKSC---- 743 (944)
Q Consensus 678 ~~~~~~~~~~~~~~~~~lv~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~p~--~K~~iv~~l~~~---- 743 (944)
.......-..-+.+..++.+.-. ..+.......+....+. .......+.++.|. +|+..++.+.+.
T Consensus 103 ~~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~ 182 (244)
T TIGR00685 103 EEITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGS 182 (244)
T ss_pred HHHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccC
Confidence 22221111122334455554422 11111111111111111 11223345666665 699888876653
Q ss_pred CCeEEEecCCccchhhhhhc--------CeeEEecccchHHHhhhCcEeeccccchhH
Q 002275 744 DYRTLAIGDGGNDVRMIQKA--------DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 744 ~~~v~~iGDg~ND~~ml~~A--------~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~ 793 (944)
...++++||+.||.+|++.+ +.||+| +.+ ..+..|++++.+...+..
T Consensus 183 ~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v-~~g--~~~~~A~~~~~~~~~v~~ 237 (244)
T TIGR00685 183 GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI-GSG--SKKTVAKFHLTGPQQVLE 237 (244)
T ss_pred CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE-ecC--CcCCCceEeCCCHHHHHH
Confidence 35799999999999999999 578888 422 245579999987666443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00037 Score=76.15 Aligned_cols=68 Identities=21% Similarity=0.237 Sum_probs=50.5
Q ss_pred EEEEeChh---hHHHHHHHHhhc-C---C-e--EEEecCCccchhhhhh-----cCeeEEecccchHHHhhhCcEeeccc
Q 002275 724 ICCRVTPS---QKAQLVELLKSC-D---Y-R--TLAIGDGGNDVRMIQK-----ADIGVGISGREGLQAARAADYSIGKF 788 (944)
Q Consensus 724 v~~~~~p~---~K~~iv~~l~~~-~---~-~--v~~iGDg~ND~~ml~~-----A~vgIam~gn~~~~~k~~Ad~v~~~~ 788 (944)
-..++.|. +|+..++.+.+. + . . ++++||+.||.+||+. +++||+| +++..+ -.|+|-+.+-
T Consensus 290 ~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~~~--t~A~y~L~dp 366 (384)
T PLN02580 290 KVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV-SSVPKE--SNAFYSLRDP 366 (384)
T ss_pred eEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEE-ecCCCC--ccceEEcCCH
Confidence 45788884 799999887764 2 1 2 4899999999999996 6999999 775321 2688888876
Q ss_pred cchhHH
Q 002275 789 RFLKRL 794 (944)
Q Consensus 789 ~~l~~l 794 (944)
.....+
T Consensus 367 ~eV~~~ 372 (384)
T PLN02580 367 SEVMEF 372 (384)
T ss_pred HHHHHH
Confidence 655444
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.3e-05 Score=77.81 Aligned_cols=107 Identities=14% Similarity=0.075 Sum_probs=74.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEE-ecCCCHHHHHHHHHHHHHHhhcccCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKTEDEVCRSLERVLLTMRITTSE 689 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (944)
..++.+++.+.++.++++|++++++||.....+..+++.+|+...-.. .+.. .+|
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~g----------------------- 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESEDG----------------------- 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCCC-----------------------
Confidence 457899999999999999999999999999999999999998432100 0000 000
Q ss_pred CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh-cC---CeEEEecCCccchhhhhhcCe
Q 002275 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADI 765 (944)
Q Consensus 690 ~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~-~~---~~v~~iGDg~ND~~ml~~A~v 765 (944)
..+|. ...-.+..+.|...++.+.+ .+ +.++++||+.+|++|++.||.
T Consensus 141 ------~~~g~----------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 141 ------IYTGN----------------------IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred ------EEeCC----------------------ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCC
Confidence 00000 00001235677776765543 32 478999999999999999999
Q ss_pred eEEe
Q 002275 766 GVGI 769 (944)
Q Consensus 766 gIam 769 (944)
++++
T Consensus 193 ~~~v 196 (202)
T TIGR01490 193 PYVV 196 (202)
T ss_pred cEEe
Confidence 9998
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.83 E-value=6.8e-05 Score=77.30 Aligned_cols=132 Identities=14% Similarity=0.167 Sum_probs=81.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
+++|++.+.++.|+++|+++.|+||-....+..+.+.+ +... . ++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~--~--i~~n~~-------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKE--Q--IYCNGS-------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcC--c--EEEeEE--------------------------
Confidence 68999999999999999999999999998898888887 5221 0 110000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEE--E-EeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC--C-RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~-~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
..++.... ...+.+.. + ......|..+++.++.....++++|||.||++|.+.||+.++-
T Consensus 123 ---~~~~~~~~--------------~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 123 ---DFSGEYIT--------------ITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred ---EecCCeeE--------------EeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 00000000 00000000 0 0011248888998887778899999999999999999997663
Q ss_pred cccchHHHhh--hCcEeeccccchhH
Q 002275 770 SGREGLQAAR--AADYSIGKFRFLKR 793 (944)
Q Consensus 770 ~gn~~~~~k~--~Ad~v~~~~~~l~~ 793 (944)
+.-...+.+ .+.+...+++.+..
T Consensus 186 -~~l~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 186 -DFLITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred -HHHHHHHHHcCCCccccCCHHHHHH
Confidence 321111112 35555555555433
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.2e-05 Score=76.04 Aligned_cols=100 Identities=21% Similarity=0.230 Sum_probs=68.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcE
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (944)
+++++.+.++.++++|++++++||.....+..++..+|+...-.+ .+..++..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~--~~~~~~~g------------------------- 126 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN--RLEFDDNG------------------------- 126 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee--eEEECCCC-------------------------
Confidence 579999999999999999999999999999999999987422111 01110000
Q ss_pred EEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc----CCeEEEecCCccchhhhhhc
Q 002275 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKA 763 (944)
Q Consensus 694 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A 763 (944)
.+++.. . .. ....+..|..+++.+.+. .+.++++|||.||++|++.|
T Consensus 127 --~~~g~~------------------~-~~--~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 127 --LLTGPI------------------E-GQ--VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred --EEeCcc------------------C-Cc--ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000000 0 00 012345798888876653 45799999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00011 Score=73.81 Aligned_cols=113 Identities=18% Similarity=0.200 Sum_probs=74.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.. ++. +....+ . .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~-~~~~~~------------------~-~ 128 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE--IYS-NPASFD------------------N-D 128 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE--Eec-cCceEC------------------C-C
Confidence 47899999999999999999999999999999998888887432110 110 000000 0 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhc-CCeEEEecCCccchhhhhhcCeeEE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVG 768 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIa 768 (944)
. .+... ......+ .-.+ ..|..+++.++.. .+.++++|||.||++|.+.||+-.|
T Consensus 129 g-~~~~~--------------------~~~~~~~-~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 129 G-RHIVW--------------------PHHCHGC-CSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred C-cEEEe--------------------cCCCCcc-CcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 0 00000 0000011 1112 2488999998887 8889999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00014 Score=74.98 Aligned_cols=125 Identities=24% Similarity=0.256 Sum_probs=87.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
..++-|++++++..|+++|++..++|+++...+..+.+..|+...-.. ++. +..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~--i~g--~~~---------------------- 140 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV--IVG--GDD---------------------- 140 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--EEc--CCC----------------------
Confidence 557889999999999999999999999999999999999998544221 000 000
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcC---eeE
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD---IGV 767 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~---vgI 767 (944)
.....=.|.....+++.+....++++|+||+.+|+.|=+.|| +||
T Consensus 141 --------------------------------~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v 188 (220)
T COG0546 141 --------------------------------VPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGV 188 (220)
T ss_pred --------------------------------CCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEE
Confidence 000001334445556666555458999999999999999999 556
Q ss_pred Eeccc-chHHHhh-hCcEeeccccchhHH
Q 002275 768 GISGR-EGLQAAR-AADYSIGKFRFLKRL 794 (944)
Q Consensus 768 am~gn-~~~~~k~-~Ad~v~~~~~~l~~l 794 (944)
.. |. ..+.... .+|+++.+...+...
T Consensus 189 ~~-g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 189 TW-GYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred EC-CCCCCcchhhcCCCEEECCHHHHHHH
Confidence 65 43 2334444 699999887665543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0001 Score=69.43 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=40.1
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 610 ~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
-..++.+++.+.+++|+++|++++++||+....+...+..+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998873
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00016 Score=75.06 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=82.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.|++.+.++.|+++|++++++||.....+....+..|+...-.. ++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 140 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VI----------------------------- 140 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EE-----------------------------
Confidence 46889999999999999999999999999999899988887432110 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC--hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVG 768 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIa 768 (944)
.+ .. ..... |+--..+++.++...+.++++||+.+|+.|.+.||+ +|+
T Consensus 141 ------~~----------------------~~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 141 ------GG----------------------DS-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred ------cC----------------------CC-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 00 00 00111 222234555555556789999999999999999999 555
Q ss_pred ec-ccc-hHHH-hhhCcEeeccccchhHH
Q 002275 769 IS-GRE-GLQA-ARAADYSIGKFRFLKRL 794 (944)
Q Consensus 769 m~-gn~-~~~~-k~~Ad~v~~~~~~l~~l 794 (944)
+. |.. ..+. ...+++++.+...+...
T Consensus 192 v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 192 VTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred ECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 52 211 1222 23688998877666544
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0029 Score=72.27 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=70.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+... ++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~~------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDGT------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCCc-------------------------
Confidence 4789999999999999999999999999999999999997321 1111110
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
.+..|+.|...++..... +.+.++||+.+|++|++.|+.++++ +.
T Consensus 122 ---------------------------------~~~kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~V-n~ 166 (479)
T PRK08238 122 ---------------------------------TNLKGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVV-GA 166 (479)
T ss_pred ---------------------------------cccCCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEE-CC
Confidence 023455665544422111 2367889999999999999999999 44
Q ss_pred c
Q 002275 773 E 773 (944)
Q Consensus 773 ~ 773 (944)
+
T Consensus 167 ~ 167 (479)
T PRK08238 167 S 167 (479)
T ss_pred C
Confidence 3
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00019 Score=73.20 Aligned_cols=122 Identities=19% Similarity=0.224 Sum_probs=80.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|+++|+++.++||.+...+....+..|+...-+. ++..+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~~~--------------------------- 125 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIGSD--------------------------- 125 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEecC---------------------------
Confidence 7889999999999999999999999998888888888887322110 00000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEE-ec-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-IS- 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m~- 770 (944)
......-.|.--..+++.++-..+.+++|||+.+|+.+-+.+|+... +.
T Consensus 126 -----------------------------~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~ 176 (205)
T TIGR01454 126 -----------------------------EVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALW 176 (205)
T ss_pred -----------------------------cCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 00000001212234455555456789999999999999999999753 31
Q ss_pred cc-chHHH-hhhCcEeeccccchh
Q 002275 771 GR-EGLQA-ARAADYSIGKFRFLK 792 (944)
Q Consensus 771 gn-~~~~~-k~~Ad~v~~~~~~l~ 792 (944)
|. ...+. +..||+++.+...+.
T Consensus 177 g~~~~~~l~~~~~~~~~~~~~~l~ 200 (205)
T TIGR01454 177 GEGDAGELLAARPDFLLRKPQSLL 200 (205)
T ss_pred cCCChhhhhhcCCCeeeCCHHHHH
Confidence 21 22223 347899988765544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00028 Score=75.12 Aligned_cols=119 Identities=20% Similarity=0.233 Sum_probs=79.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.|++.++|+.|+++|++++++||.+...+..+....|+...-.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~---------------------------------- 145 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR---------------------------------- 145 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----------------------------------
Confidence 4788999999999999999999999999888888887777622110
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhH------HHHHHHHhhcCCeEEEecCCccchhhhhhcCe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (944)
..+..+..+..| ..+++.++-..+.+++|||+.||+.|-+.||+
T Consensus 146 ------------------------------~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 146 ------------------------------WIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred ------------------------------EEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCC
Confidence 111111122222 23444444446789999999999999999998
Q ss_pred e-EEec-c-cchHHHh-hhCcEeeccccchhHH
Q 002275 766 G-VGIS-G-REGLQAA-RAADYSIGKFRFLKRL 794 (944)
Q Consensus 766 g-Iam~-g-n~~~~~k-~~Ad~v~~~~~~l~~l 794 (944)
. +++. | +...+.. ..+|+++.+...+..+
T Consensus 196 ~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 196 QCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred eEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 4 4441 2 2222233 3789998776555443
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00024 Score=72.93 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=78.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+...-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----------------------------------- 129 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----------------------------------- 129 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc-----------------------------------
Confidence 688999999999999999999999999999999999888743211
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEe----C--hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----T--PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~--p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
..+.++- . |+-=..+++.++...+.+++|||+.+|+.+.+.||+-
T Consensus 130 -----------------------------~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~ 180 (213)
T TIGR01449 130 -----------------------------VLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCP 180 (213)
T ss_pred -----------------------------EEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCe
Confidence 0011110 1 1112334444444557799999999999999999988
Q ss_pred EE-ec-ccc-hHHHh-hhCcEeeccccch
Q 002275 767 VG-IS-GRE-GLQAA-RAADYSIGKFRFL 791 (944)
Q Consensus 767 Ia-m~-gn~-~~~~k-~~Ad~v~~~~~~l 791 (944)
.. +. |.. ..... ..||+++.+...+
T Consensus 181 ~i~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 181 SVLLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred EEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 64 31 221 11232 3688888776554
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00042 Score=71.24 Aligned_cols=123 Identities=18% Similarity=0.122 Sum_probs=80.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++||.....+..+.+..|+...-.. ++.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--i~~----------------------------- 130 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV--VIT----------------------------- 130 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE--EEe-----------------------------
Confidence 4779999999999999999999999999999888888887432110 000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Ee-c
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am-~ 770 (944)
.+. .....-.|.--..+++.++...+.+++|||+.+|+.+-+.||+-. ++ .
T Consensus 131 ------~~~---------------------~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~ 183 (214)
T PRK13288 131 ------LDD---------------------VEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAW 183 (214)
T ss_pred ------cCc---------------------CCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 000 000001222233455555555678999999999999999999864 23 1
Q ss_pred cc-chHHHh-hhCcEeeccccchhH
Q 002275 771 GR-EGLQAA-RAADYSIGKFRFLKR 793 (944)
Q Consensus 771 gn-~~~~~k-~~Ad~v~~~~~~l~~ 793 (944)
|. ...+.. ..+|+++.+...+..
T Consensus 184 g~~~~~~l~~~~~~~~i~~~~~l~~ 208 (214)
T PRK13288 184 TIKGREYLEQYKPDFMLDKMSDLLA 208 (214)
T ss_pred CCCCHHHHhhcCcCEEECCHHHHHH
Confidence 21 122232 358888887665544
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=97.42 E-value=9e-05 Score=59.40 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=37.7
Q ss_pred ccccccCCCceeeecc-ccccccchHHHHHHHhhHHHHHHHHHHHHhhc
Q 002275 11 ETSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLW 58 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~-~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~ 58 (944)
++|+++||+|+++.++ .++| +.++++|.+|++++++++++++++
T Consensus 17 ~~r~~~~G~N~l~~~~~~s~~----~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 17 ARRLERYGPNELPPPKKRSPL----LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHhCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4799999999999987 5565 889999999999888888888765
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0018 Score=79.15 Aligned_cols=185 Identities=18% Similarity=0.193 Sum_probs=98.4
Q ss_pred cceEeeEeccccccCCChHHHHHHH-HHcCCeEEEEcCCChhhHHHHHHHc---CCCCCCCCCeEEEecCCCH-------
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETL-RKAGINFWMLTGDKQNTAIQIALSC---NFISPEPKGQLLSIDGKTE------- 669 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l-~~~Gi~v~i~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~------- 669 (944)
|.|++-.....-.+.+++.+++++| ++.|+.++++|||+..+.......+ ++... .|..+...+...
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaE--HG~~ir~~~~~~w~~~~~~ 681 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAE--HGYFLRLKRDVEWETCVPV 681 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEe--CCEEEEeCCCceeeecchh
Confidence 4454433222335667899999997 7889999999999999988877543 23322 222333222210
Q ss_pred -HHHHH-HHHHHHHHh----hcccCCCCcEEEEEcchhH-HHH----HHHHHHHHHhh-----hhccceeEEEEeChh--
Q 002275 670 -DEVCR-SLERVLLTM----RITTSEPKDVAFVVDGWAL-EIA----LKHYRKAFTEL-----AILSRTAICCRVTPS-- 731 (944)
Q Consensus 670 -~~~~~-~~~~~~~~~----~~~~~~~~~~~lv~~~~~~-~~~----~~~~~~~~~~~-----~~~~~~~v~~~~~p~-- 731 (944)
+..+. ......... .-..-+.+...++..-... +.. .+....++... ..........++.|.
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gv 761 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGV 761 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCC
Confidence 11111 111111111 1111123344454332211 100 11122222111 112223345688887
Q ss_pred hHHHHHHHHhh----c---CCeEEEecCCccchhhhhhcC--------------eeEEecccchHHHhhhCcEeeccccc
Q 002275 732 QKAQLVELLKS----C---DYRTLAIGDGGNDVRMIQKAD--------------IGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 732 ~K~~iv~~l~~----~---~~~v~~iGDg~ND~~ml~~A~--------------vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+|+..++.+.+ . .+.++++||+.||.+||+.++ ++|.+ |... -.|.+-+.+-..
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~~~----S~A~y~L~d~~e 836 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQKP----SKAKYYLDDTAE 836 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CCCC----ccCeEecCCHHH
Confidence 69998888753 1 347999999999999999885 55566 5432 246666665444
Q ss_pred hh
Q 002275 791 LK 792 (944)
Q Consensus 791 l~ 792 (944)
..
T Consensus 837 V~ 838 (854)
T PLN02205 837 IV 838 (854)
T ss_pred HH
Confidence 43
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00048 Score=71.24 Aligned_cols=123 Identities=12% Similarity=0.045 Sum_probs=79.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.|++.++|+.|+++|+++.++||.....+..+.+..|+...-.. ++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 139 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LA----------------------------- 139 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EE-----------------------------
Confidence 46889999999999999999999999999999999988887433110 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
.+. ......-.|+-=..+.+.++...+++++|||+.||+++-+.||+....-.
T Consensus 140 ------~~~---------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~ 192 (222)
T PRK10826 140 ------SAE---------------------KLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVP 192 (222)
T ss_pred ------Ecc---------------------cCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEec
Confidence 000 00000001111123333443345679999999999999999998764312
Q ss_pred cc--hHHH-hhhCcEeeccccchh
Q 002275 772 RE--GLQA-ARAADYSIGKFRFLK 792 (944)
Q Consensus 772 n~--~~~~-k~~Ad~v~~~~~~l~ 792 (944)
.. ..+. ...||+++.++..+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 193 APEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CCccCchhhhhhhheeccCHHHHh
Confidence 21 1112 236888887766653
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0009 Score=68.44 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=72.1
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI-~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.+.|++.+.| +.++++|++++++|+.+...+..++..+|+... .. ++...-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~-~~--~i~t~l------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR-VN--LIASQM------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc-Cc--eEEEEE-------------------------
Confidence 4589999999 578899999999999999999999999886221 11 111100
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHH-hhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l-~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
....+| ......+..++|..-++.. ........+-||+.||.|||+.|+.++++
T Consensus 147 --~~~~tg----------------------~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 147 --QRRYGG----------------------WVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred --EEEEcc----------------------EECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 000011 0011124556787766643 43345567999999999999999999999
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00072 Score=71.28 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=82.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|+++|+++.++|+.+...+..+...+|+...-.. ++.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~----------------------------- 157 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLA----------------------------- 157 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEe-----------------------------
Confidence 5689999999999999999999999999999999888887432110 100
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Eecc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~g 771 (944)
+.. .....-.|+-=..+++.++-..+.+++|||+.+|+.+=+.||+-. ++.|
T Consensus 158 ------~~d---------------------~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 158 ------AED---------------------VYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred ------ccc---------------------CCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 000 000000122223445555555678999999999999999999864 5533
Q ss_pred cchHHHhhhCcEeeccccchhHH
Q 002275 772 REGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 772 n~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
.........||+++.+.+.+...
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHH
Confidence 33232233589988877665443
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0012 Score=67.07 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=71.8
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIE-TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~-~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.+.|++.+.|+ .++++|++++++|+-+...+..+++..++..... ++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~---~i~t~le------------------------ 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN---LIASQIE------------------------ 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc---EEEEEeE------------------------
Confidence 57899999995 7899999999999999999999998866533211 1110000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHH-hhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l-~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
+.+| .......+..++|..-++.. ........+-||+.||.|||+.||.++++
T Consensus 147 ----~~~g---------------------g~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 147 ----RGNG---------------------GWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred ----EeCC---------------------ceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 0000 00011234556787766543 33334567999999999999999999999
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0014 Score=63.15 Aligned_cols=105 Identities=17% Similarity=0.150 Sum_probs=68.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH---HHHHHc---CCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhh
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI---QIALSC---NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR 684 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~---~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (944)
+|.+.+++++++++++++|++++++|||+...+. ....++ |..-+. +.++..+|.......
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~----------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALH----------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhh-----------
Confidence 5788999999999999999999999999998875 444442 211111 224444443321110
Q ss_pred cccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh-hHHHHHHHHhh-----cCCeEEEecCCccchh
Q 002275 685 ITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-QKAQLVELLKS-----CDYRTLAIGDGGNDVR 758 (944)
Q Consensus 685 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-~K~~iv~~l~~-----~~~~v~~iGDg~ND~~ 758 (944)
..+. .-.|. .|...++.+.+ ....++++||+.+|+.
T Consensus 92 -------------------------------------~e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~ 133 (157)
T smart00775 92 -------------------------------------REVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVI 133 (157)
T ss_pred -------------------------------------cccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHH
Confidence 0000 11233 37666666665 2355678999999999
Q ss_pred hhhhcCee
Q 002275 759 MIQKADIG 766 (944)
Q Consensus 759 ml~~A~vg 766 (944)
+-+++++.
T Consensus 134 ~y~~~gi~ 141 (157)
T smart00775 134 SYSAVGIP 141 (157)
T ss_pred HHHHcCCC
Confidence 99988765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0084 Score=65.10 Aligned_cols=191 Identities=13% Similarity=0.133 Sum_probs=101.9
Q ss_pred ccceEeeEecccc--ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCC----------
Q 002275 600 HDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------- 667 (944)
Q Consensus 600 ~~l~~lG~i~~~d--~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~---------- 667 (944)
-|.+++-++.-.| .+.+++.++|++|. +|+.++++|||+...+..+..-.++.--...|..+...+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~ 196 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQ 196 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceecccccc
Confidence 4667776555333 48889999999999 8899999999999998877322121100111111111000
Q ss_pred -----CHHHHHHHHHHHHH-------HhhcccCCCCcEEEEEcchhH-----HHHHHHHHHHHHhhh--hccceeEEEEe
Q 002275 668 -----TEDEVCRSLERVLL-------TMRITTSEPKDVAFVVDGWAL-----EIALKHYRKAFTELA--ILSRTAICCRV 728 (944)
Q Consensus 668 -----~~~~~~~~~~~~~~-------~~~~~~~~~~~~~lv~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~v~~~~ 728 (944)
...+....+..... ...-..-+.+..++.+.-... ............... ......-..++
T Consensus 197 ~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEv 276 (366)
T PLN03017 197 SLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEI 276 (366)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEe
Confidence 00000011111111 111112234444554332211 112222222111111 12233445677
Q ss_pred Chh---hHHHHHHHHhhc-------CCeEEEecCCccchhhhhhc-----CeeEEecccchHHHhhhCcEeeccccchhH
Q 002275 729 TPS---QKAQLVELLKSC-------DYRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 729 ~p~---~K~~iv~~l~~~-------~~~v~~iGDg~ND~~ml~~A-----~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~ 793 (944)
.|. +|+..++.+.+. +..++++||...|-.||+.. ++||.+ |.... .-.|+|.+.+-.....
T Consensus 277 RP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~k--~T~A~y~L~dp~eV~~ 353 (366)
T PLN03017 277 RPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFPK--DTDASYSLQDPSEVMD 353 (366)
T ss_pred cCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCCC--CCcceEeCCCHHHHHH
Confidence 774 899999988753 22589999999999999865 467777 53211 2368888877655444
Q ss_pred H
Q 002275 794 L 794 (944)
Q Consensus 794 l 794 (944)
+
T Consensus 354 f 354 (366)
T PLN03017 354 F 354 (366)
T ss_pred H
Confidence 3
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0012 Score=68.61 Aligned_cols=123 Identities=20% Similarity=0.170 Sum_probs=80.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+...-. .+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i------------------------------ 141 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VL------------------------------ 141 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EE------------------------------
Confidence 678999999999999999999999999888877777777632210 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Eec-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GIS- 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~- 770 (944)
+.+. ......-.|+--..+++.++...+++++|||+.+|+.|-+.||+.. ++.
T Consensus 142 ----~~~~---------------------~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 142 ----IGGD---------------------TLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred ----EecC---------------------cCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 0000 0000001222234556666666788999999999999999999885 331
Q ss_pred ccc-h-HHH-hhhCcEeeccccchhH
Q 002275 771 GRE-G-LQA-ARAADYSIGKFRFLKR 793 (944)
Q Consensus 771 gn~-~-~~~-k~~Ad~v~~~~~~l~~ 793 (944)
|.. . +.. ...+|+++.+...+..
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~ 222 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWN 222 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHH
Confidence 211 1 112 2358999988766543
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0001 Score=60.07 Aligned_cols=42 Identities=26% Similarity=0.339 Sum_probs=34.8
Q ss_pred ccccccCCCceeeecc-ccccccchHHHHHHHhhHHHHHHHHHHHHh
Q 002275 11 ETSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQ 56 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~-~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~ 56 (944)
++|+++||+|+++.++ .++| ..++++|++|++++++++++++
T Consensus 27 ~~r~~~~G~N~l~~~~~~s~~----~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 27 EERRKKYGPNELPEPKKKSLW----RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHSSSSTTTTTSSSHH----HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHhcccccccccccCcHH----HHHHHHHHhHHHHHHHHHHHHC
Confidence 3699999999997765 4555 8999999999988888887764
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0033 Score=66.71 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=79.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~----------------------------------- 186 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS----------------------------------- 186 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE-----------------------------------
Confidence 578999999999999999999999999999999999998743210
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEe---ChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEE-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV---TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG- 768 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa- 768 (944)
..+..+. .|+--..+++.++...+++++|||+.+|+.+-+.||+-..
T Consensus 187 -----------------------------~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 187 -----------------------------VVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVA 237 (273)
T ss_pred -----------------------------EEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 0000000 0111122233333345679999999999999999998753
Q ss_pred e-ccc-chHHHh-hhCcEeeccccchhHH
Q 002275 769 I-SGR-EGLQAA-RAADYSIGKFRFLKRL 794 (944)
Q Consensus 769 m-~gn-~~~~~k-~~Ad~v~~~~~~l~~l 794 (944)
+ .|. ...+.. ..||+++.+...+..+
T Consensus 238 v~~g~~~~~~l~~~~ad~~i~~~~eL~~~ 266 (273)
T PRK13225 238 VTWGFNDRQSLVAACPDWLLETPSDLLQA 266 (273)
T ss_pred EecCCCCHHHHHHCCCCEEECCHHHHHHH
Confidence 2 122 222233 3689999887665443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0023 Score=67.64 Aligned_cols=42 Identities=26% Similarity=0.222 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~ 654 (944)
++.|++.+.|+.|+++|+++.++||.+...+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 567999999999999999999999999999888888888743
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0033 Score=67.01 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++-|++.+.|+.|+++|+++.++||.....+..+.+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999998887777766653
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0029 Score=65.31 Aligned_cols=121 Identities=20% Similarity=0.252 Sum_probs=79.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC--CCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI--SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (944)
.++.+++.+.++.|+++|+++.++||.....+....+..|+. ..-.. ++. .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~--i~~-~------------------------ 138 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDA--VVC-P------------------------ 138 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCE--EEc-C------------------------
Confidence 479999999999999999999999999999999998888874 21110 100 0
Q ss_pred CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEE-EEeChhhHHHHHHHHhhc-CCeEEEecCCccchhhhhhcCeeE
Q 002275 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 690 ~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
.... ..-.|+-=..+++.+... .+.+++|||+.+|+.+-+.||+..
T Consensus 139 --------------------------------~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 139 --------------------------------SDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred --------------------------------CcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 0000 000122222344444433 468999999999999999999986
Q ss_pred --Ee-cc-cchHHHhh-hCcEeeccccch
Q 002275 768 --GI-SG-REGLQAAR-AADYSIGKFRFL 791 (944)
Q Consensus 768 --am-~g-n~~~~~k~-~Ad~v~~~~~~l 791 (944)
++ .| ........ .+|+++.+.+.+
T Consensus 187 ~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 187 VVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred EEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 23 12 12222322 578887766544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0035 Score=64.51 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=75.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.|+.|+++|+++.++|+.+...+.......|+... . .++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~--~i~------------------------------ 129 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-E--VFV------------------------------ 129 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-c--EEE------------------------------
Confidence 5789999999999999999999999887666655556665211 0 010
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-EEecc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 771 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~g 771 (944)
+++.. ....-.|+--..+.+.++-..+++++|||+.+|+.+=+.||+. |++..
T Consensus 130 -----~~~~~---------------------~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 130 -----TAERV---------------------KRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred -----EHHHh---------------------cCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 00000 0000012223344555555568899999999999999999985 56622
Q ss_pred cchHHHhhhCcEeeccccch
Q 002275 772 REGLQAARAADYSIGKFRFL 791 (944)
Q Consensus 772 n~~~~~k~~Ad~v~~~~~~l 791 (944)
.........+|+++.+...+
T Consensus 184 ~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 184 PADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CCchhhhccCCEEecchhhe
Confidence 11112223688888775544
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0052 Score=64.62 Aligned_cols=121 Identities=11% Similarity=0.074 Sum_probs=81.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+...-+. ++.-+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~--------------------------- 158 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGS--------------------------- 158 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecC---------------------------
Confidence 5789999999999999999999999999999999999887433110 10000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEE-ec-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-IS- 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m~- 770 (944)
. .-...-.|+--..+++.++...+++++|||+.+|+.+=+.||+-.. +.
T Consensus 159 --------~---------------------~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~ 209 (248)
T PLN02770 159 --------E---------------------CEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTT 209 (248)
T ss_pred --------c---------------------CCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence 0 0000011222344555555556789999999999999999998753 31
Q ss_pred ccchHHHhh-hCcEeeccccch
Q 002275 771 GREGLQAAR-AADYSIGKFRFL 791 (944)
Q Consensus 771 gn~~~~~k~-~Ad~v~~~~~~l 791 (944)
|....+... .+|+++.+...+
T Consensus 210 g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 210 RNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred CCCHHHHhhcCCCEEeccchhh
Confidence 222222333 689998876653
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0052 Score=67.42 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=81.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|+++|+++.++|+.+...+..+.+..|+...-+. ++
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv------------------------------ 263 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IV------------------------------ 263 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EE------------------------------
Confidence 4679999999999999999999999999999999999887432110 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Eecc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~g 771 (944)
.++. .....-.|+-=..+++.++...+.+++|||+.+|+.+=+.||+-. ++ .
T Consensus 264 -----~sdd---------------------v~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV-~ 316 (381)
T PLN02575 264 -----AAED---------------------VYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAV-A 316 (381)
T ss_pred -----ecCc---------------------CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEE-C
Confidence 0000 000000122223455566656788999999999999999999875 44 3
Q ss_pred cchHHH-hhhCcEeeccccchhH
Q 002275 772 REGLQA-ARAADYSIGKFRFLKR 793 (944)
Q Consensus 772 n~~~~~-k~~Ad~v~~~~~~l~~ 793 (944)
...... ...||+++.+.+.+..
T Consensus 317 ~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 317 SKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CCCChhHhcCCCEEECCHHHHHH
Confidence 322111 2258988888766643
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0051 Score=58.07 Aligned_cols=110 Identities=13% Similarity=0.136 Sum_probs=72.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
.++|+-++.++.+++++++++++||-...-..++....+--..-.+ +.+.. .+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~---idi~s------------------------n~ 125 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYC---IDIVS------------------------NN 125 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceee---eEEee------------------------cC
Confidence 6899999999999999999999999888887777766541100000 00000 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
..+-.+| .+..++-+-++ .+|...++.+++..+.+.++|||+.|+++-+.+|+=.|=
T Consensus 126 ~~ih~dg--------------------~h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 126 DYIHIDG--------------------QHSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ceEcCCC--------------------ceeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 0000011 01111111122 269999999999999999999999999998888876653
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0085 Score=58.99 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=30.8
Q ss_pred ccceEeeEecccc----ccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002275 600 HDLKVLGVTAIED----RLQDGVPETIETLRKAGINFWMLTGDKQ 640 (944)
Q Consensus 600 ~~l~~lG~i~~~d----~lr~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (944)
.|.++.|-..+.+ ++.|++++++++|+++|+++.++|+.+.
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4455544433332 4689999999999999999999998763
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0083 Score=62.73 Aligned_cols=44 Identities=16% Similarity=0.298 Sum_probs=40.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~ 655 (944)
-+++|++.+.++.|+++|+++.++||-....+..+.++.|+..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~ 163 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHP 163 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCc
Confidence 35799999999999999999999999999999999999998644
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.083 Score=51.69 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
+.+...+.+|+++|++|+.+|.........+-+.+|+.
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 45678999999999999999999988888888898875
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0064 Score=62.54 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=34.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC----hhhHHHHHHHcCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDK----QNTAIQIALSCNF 652 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~----~~~a~~ia~~~gi 652 (944)
-.+.+++++.++.++++|+++.++|||+ ..++..+.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3466789999999999999999999986 4467777777777
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0097 Score=61.42 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++.|++.++++.|+++|++++++|+.+...+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888888888888763
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0064 Score=66.12 Aligned_cols=108 Identities=16% Similarity=0.070 Sum_probs=73.0
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC-CCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccC
Q 002275 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-PEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (944)
Q Consensus 610 ~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (944)
..+++.+++.+++++|++.|++++++||++...+..+.+.+++.. .-+. +.+....
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~-----i~~~~~~------------------ 240 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD-----LIGRPPD------------------ 240 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh-----hhCCcch------------------
Confidence 567899999999999999999999999999999999998887743 1000 0000000
Q ss_pred CCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh-cCCeEEEecCCccchhhhhhcCeeE
Q 002275 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 689 ~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
..+ ...... -.-.|.-+..+++.+.. ...++++|||..+|+.+-+.||+-+
T Consensus 241 ----------------------~~~-----~~~~~~-~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 241 ----------------------MHF-----QREQGD-KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ----------------------hhh-----cccCCC-CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 000 000000 01134456666666544 3478999999999999999999885
Q ss_pred E
Q 002275 768 G 768 (944)
Q Consensus 768 a 768 (944)
.
T Consensus 293 i 293 (300)
T PHA02530 293 W 293 (300)
T ss_pred E
Confidence 3
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0042 Score=63.90 Aligned_cols=41 Identities=12% Similarity=0.215 Sum_probs=34.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC----ChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGD----KQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd----~~~~a~~ia~~~gi~ 653 (944)
.+.+.+++.++.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34445999999999999999999999 666888888889883
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0059 Score=61.76 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=38.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
.+++.+.+.++++.|+++|+++.++||.+...+....+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 3456777899999999999999999999999999999999974
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.01 Score=61.23 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
++.|++.+.++.|+++|+++.++|+-+...+.......|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l 132 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGL 132 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCc
Confidence 6789999999999999999999999888887777777776
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.01 Score=68.58 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=78.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.|+.|+++|+++.++|+.....+....+.+|+...-.. ++..+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d--------------------------- 380 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIE--------------------------- 380 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecC---------------------------
Confidence 6789999999999999999999999999999999998887432111 10000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-EEec-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS- 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~- 770 (944)
.+-..-.|+--..+++.+ ..+++++|||+.+|+.+-+.||+- |++.
T Consensus 381 ------------------------------~v~~~~kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~ 428 (459)
T PRK06698 381 ------------------------------QINSLNKSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNF 428 (459)
T ss_pred ------------------------------CCCCCCCcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeC
Confidence 000000121111222222 246799999999999999999985 3441
Q ss_pred ccchHHHhhhCcEeeccccchhHH
Q 002275 771 GREGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 771 gn~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+....+....+|+++.+.+.+..+
T Consensus 429 ~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 429 DFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred CCCcccccCCCCEEeCCHHHHHHH
Confidence 211111223589998877665444
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=54.89 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=35.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC--------hhhHHHHHHHcCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDK--------QNTAIQIALSCNF 652 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~--------~~~a~~ia~~~gi 652 (944)
.++.+++.++++.|+++|++++++|+.. ...+....+.+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999998 6667777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.011 Score=59.94 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++.|++.+++++|+++|++++++|+-+...+....+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999988888888888873
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.028 Score=54.88 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=44.9
Q ss_pred ccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcCCC
Q 002275 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCNFI 653 (944)
Q Consensus 600 ~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd-~~~~a~~ia~~~gi~ 653 (944)
.+.......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+.
T Consensus 32 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 32 NNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344556666666789999999999999999999999987 888888888888874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.04 Score=54.78 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=38.8
Q ss_pred HHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Ee-cccchHHH-hhhC--cEeeccccchhHH
Q 002275 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-SGREGLQA-ARAA--DYSIGKFRFLKRL 794 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am-~gn~~~~~-k~~A--d~v~~~~~~l~~l 794 (944)
..+++.++...+++++|||+.+|+.+-+.||+.. ++ .|...... ...+ |+++.+...+..+
T Consensus 110 ~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 110 LSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred HHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 3455555555678999999999999999999864 33 12221111 2235 8887776555443
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.023 Score=61.04 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=75.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|++.|+++.++|+.+...+..+....+....... ...+.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~--~~~v~--------------------------- 194 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQG--LDVFA--------------------------- 194 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCc--eEEEe---------------------------
Confidence 5789999999999999999999999888777666554422111000 00000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeE-EEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEec-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS- 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~- 770 (944)
+ ..+ ...-.|+-=..+++.++-..+.+++|||+.+|+.+-+.||+.+...
T Consensus 195 ------~----------------------~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~ 246 (286)
T PLN02779 195 ------G----------------------DDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTK 246 (286)
T ss_pred ------c----------------------cccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEc
Confidence 0 000 0000122223455555555678999999999999999999886431
Q ss_pred -ccchHHHhhhCcEeeccccchh
Q 002275 771 -GREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 771 -gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
|....+....+|+++.+...+.
T Consensus 247 ~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 247 SSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred cCCccccccCCCcEEECChhhcc
Confidence 2111111235899887766543
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.019 Score=64.23 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=74.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH-HcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL-SCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++.|++.+.++.|+++|+++.|+|+.+...+..... ..|+...-+. ++
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii----------------------------- 141 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IV----------------------------- 141 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EE-----------------------------
Confidence 467999999999999999999999998887776654 4565221110 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEE-EEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Ee
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am 769 (944)
.+ ..+. ..-.|+-=..+++.++-..+++++|||+.+|+.+=+.||+.. ++
T Consensus 142 ------~~----------------------d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v 193 (382)
T PLN02940 142 ------GG----------------------DEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAV 193 (382)
T ss_pred ------eh----------------------hhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 00 0000 000122223445555545678999999999999999999875 44
Q ss_pred cccch--HHHhhhCcEeeccccch
Q 002275 770 SGREG--LQAARAADYSIGKFRFL 791 (944)
Q Consensus 770 ~gn~~--~~~k~~Ad~v~~~~~~l 791 (944)
.... ......+|+++.+...+
T Consensus 194 -~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 194 -PSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred -CCCCcchhhccCccEEeCCHhHc
Confidence 2221 11223577777665443
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.013 Score=57.71 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=40.0
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 610 ~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
-..++.+++.+.+++|+++|++++++|+.+...+....+.+|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 35689999999999999999999999999999899999998875
|
... |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.2 Score=54.38 Aligned_cols=189 Identities=13% Similarity=0.140 Sum_probs=97.6
Q ss_pred cceEeeEecccc--ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEec-C-----------
Q 002275 601 DLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID-G----------- 666 (944)
Q Consensus 601 ~l~~lG~i~~~d--~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-~----------- 666 (944)
|.+++-++---| .+.++++++|++|. ++..++++|||+...+.....-.++.--+.-|.-+... +
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~ 184 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSL 184 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCcccccccccc
Confidence 455554433333 46778899999999 56799999999999887765432321111111000000 0
Q ss_pred --CCHHHHHHHHHHHHHHh-------hcccCCCCcEEEEEcchh-----HHHHHHHHHHHHHhhh--hccceeEEEEeCh
Q 002275 667 --KTEDEVCRSLERVLLTM-------RITTSEPKDVAFVVDGWA-----LEIALKHYRKAFTELA--ILSRTAICCRVTP 730 (944)
Q Consensus 667 --~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~lv~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~v~~~~~p 730 (944)
....+....+......+ .-..-+.+..++.+.-.. .........+...... ......-..++.|
T Consensus 185 ~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP 264 (354)
T PLN02151 185 LCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRP 264 (354)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeC
Confidence 00000011111111111 111223344455433221 1112222222111111 1222334567777
Q ss_pred h---hHHHHHHHHhhc-C------CeEEEecCCccchhhhhhc-----CeeEEecccchHHHhh-hCcEeeccccchhHH
Q 002275 731 S---QKAQLVELLKSC-D------YRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAAR-AADYSIGKFRFLKRL 794 (944)
Q Consensus 731 ~---~K~~iv~~l~~~-~------~~v~~iGDg~ND~~ml~~A-----~vgIam~gn~~~~~k~-~Ad~v~~~~~~l~~l 794 (944)
. +|+..++.+.+. + .-++++||...|-.||+.. |+||-+ |... ++ .|+|.+.+-.....+
T Consensus 265 ~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-g~~~---k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 265 IIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILV-SKYA---KETNASYSLQEPDEVMEF 340 (354)
T ss_pred CCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEe-ccCC---CCCcceEeCCCHHHHHHH
Confidence 4 799999987754 1 2389999999999999863 667766 4321 23 688988876665444
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.043 Score=56.75 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
++.|++.++++.|+ +|+++.++|+.....+.......|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999888777777777776
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.018 Score=57.50 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=34.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
-++.|++.++++.|+++|+++.++|+. ..+....+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 478999999999999999999999987 5566677777763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.033 Score=55.33 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=33.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++.|++.+.++.|+++|++++++|+-.... ......+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 678999999999999999999999988777 5554457763
|
HAD subfamilies caused by an overly broad single model. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.1 Score=51.06 Aligned_cols=162 Identities=22% Similarity=0.252 Sum_probs=81.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCC-CHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++-|++.++++.|++.=-.+++-| .-..-+..+|..+|+-.....+.-+.++.. ..++.. +..+..+..
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~ST-SY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR---~E~L~~~~~------ 152 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVIST-SYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER---EELLSIIDV------ 152 (315)
T ss_pred ccCCChHHHHHHHhccCCceEEec-cHHHHHHHHHHhcCCCccccccccccCccccCChHHH---HHHHHhcCc------
Confidence 467999999999988755555544 334456778888887433222111222211 111111 111111110
Q ss_pred cEEEEEcchhHHHHHHHHHHHH--HhhhhccceeEEEEeChhhHHHHHHHHhhc---CCeEEEecCCccchhhhhhc---
Q 002275 692 DVAFVVDGWALEIALKHYRKAF--TELAILSRTAICCRVTPSQKAQLVELLKSC---DYRTLAIGDGGNDVRMIQKA--- 763 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~---~~~v~~iGDg~ND~~ml~~A--- 763 (944)
.-.++|+.+-..++++..++ .++..++...- -+--..|+++++.+.+. ..-.+++||+..|+.||+.+
T Consensus 153 --~~~~~geelfe~lDe~F~rLip~E~gki~~~vk--~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 153 --IASLSGEELFEKLDELFSRLIPSEVGKIVESVK--AVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred --cccccHHHHHHHHHHHHhhcCHHHHHHHHHhhh--hccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhcc
Confidence 01233333222222211110 00111111000 00112466777766654 23478999999999999987
Q ss_pred -CeeEEecccchHHHhhhCcEeeccccc
Q 002275 764 -DIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 764 -~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
|+.||..||+ -+.+.||+.+.+.+.
T Consensus 229 GglAvaFNGNe--Yal~eAdVAvisp~~ 254 (315)
T COG4030 229 GGLAVAFNGNE--YALKEADVAVISPTA 254 (315)
T ss_pred CceEEEecCCc--ccccccceEEeccch
Confidence 3556665554 477889988766544
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.021 Score=56.95 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
++.|++.++|+.|+++|+++.++|+... +....+.+|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999998543 3456666666
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.02 Score=54.75 Aligned_cols=40 Identities=13% Similarity=0.016 Sum_probs=36.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
-+++|++.+.++.|+ .++++.++|+-+...+..+.+.+++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 367999999999999 5799999999999999998888876
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.047 Score=56.36 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++.|++.+.++.|+++ ++++++|+-....+....+.+|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999988888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.042 Score=56.63 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=27.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTA 643 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a 643 (944)
-++.|++.+.|+.|+++|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998776533
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.049 Score=52.71 Aligned_cols=26 Identities=38% Similarity=0.639 Sum_probs=23.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd 638 (944)
++-|++.++|++|+++|++++++|..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 56789999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.057 Score=52.99 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~-~~~a~~ia~~~gi 652 (944)
.+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 678999999999999999999999988 5666666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.046 Score=55.93 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=37.2
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEcCCChhhHHHHHHHcCCCC
Q 002275 613 RLQDGVPETIETL--RKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (944)
Q Consensus 613 ~lr~~~~~aI~~l--~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~ 654 (944)
|+.|+.+++++.+ ++.|+.+.|+|.-+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 56899999999999999999999888743
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.098 Score=54.80 Aligned_cols=43 Identities=7% Similarity=0.190 Sum_probs=33.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH---HHHHHcCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI---QIALSCNFI 653 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~---~ia~~~gi~ 653 (944)
..++-|++.+.++.|++.|+++.++|+|+..... ...+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 3557799999999999999999999999855433 444556663
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.089 Score=50.23 Aligned_cols=27 Identities=30% Similarity=0.442 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDK 639 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (944)
++.|++.++++.|+++|+++.++|+.+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.2 Score=49.20 Aligned_cols=114 Identities=17% Similarity=0.260 Sum_probs=71.1
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi-~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
|+-|+..++|+.+++.|. .+.|+|--+......+.+..|+..- ......+....+ .
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--------------------F~~IfTNPa~~d---a 140 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--------------------FSEIFTNPACVD---A 140 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--------------------HHHHhcCCcccC---C
Confidence 678999999999999998 8999998888777777777765210 000000000000 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhh--HHHHHHHHhhc-------CCeEEEecCCccc-hhhhh
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSC-------DYRTLAIGDGGND-VRMIQ 761 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~--K~~iv~~l~~~-------~~~v~~iGDg~ND-~~ml~ 761 (944)
.-.+.+. -.....-|...|.+ |+.++..+... -+.++.+|||.|| +|+++
T Consensus 141 ~G~L~v~--------------------pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~ 200 (256)
T KOG3120|consen 141 SGRLLVR--------------------PYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLR 200 (256)
T ss_pred CCcEEee--------------------cCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchh
Confidence 0000000 01122334446665 88887777643 2478999999999 78888
Q ss_pred hcCeeEEe
Q 002275 762 KADIGVGI 769 (944)
Q Consensus 762 ~A~vgIam 769 (944)
...--+||
T Consensus 201 Lr~~D~am 208 (256)
T KOG3120|consen 201 LRACDVAM 208 (256)
T ss_pred cccCceec
Confidence 88777888
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.13 Score=50.76 Aligned_cols=56 Identities=18% Similarity=0.160 Sum_probs=36.1
Q ss_pred HHHHHhhcCCeEEEecCCccchhhhhhcCeeE--Ee-cccchHHHh-hhCcEeeccccch
Q 002275 736 LVELLKSCDYRTLAIGDGGNDVRMIQKADIGV--GI-SGREGLQAA-RAADYSIGKFRFL 791 (944)
Q Consensus 736 iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI--am-~gn~~~~~k-~~Ad~v~~~~~~l 791 (944)
+++.++-..+.++||||..+|+.+=+.||+.. .+ .|....... ..||+++.+...+
T Consensus 115 a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 115 ARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred HHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 33444444578999999999999999999853 33 232222222 2488888765443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.12 Score=52.55 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=32.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhh---HHHHHHHcCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNF 652 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~ia~~~gi 652 (944)
-|.-|++.++++.|+++|++|+++|||+... +..-..+.|+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~ 162 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGF 162 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCC
Confidence 4777899999999999999999999999765 3333344554
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.079 Score=53.75 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=31.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
++-|++.++++.|+++|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999986543 4556666665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.062 Score=49.86 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCN 651 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd-~~~~a~~ia~~~g 651 (944)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6766666665555
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.83 Score=47.95 Aligned_cols=49 Identities=12% Similarity=0.173 Sum_probs=40.0
Q ss_pred eEeccccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCCC
Q 002275 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFIS 654 (944)
Q Consensus 606 G~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TG---d~~~~a~~ia~~~gi~~ 654 (944)
|.+.-.+.+-+++.++|++|+++|++++++|| |+........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44444566667999999999999999999996 77888888888888754
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.093 Score=50.51 Aligned_cols=40 Identities=15% Similarity=0.305 Sum_probs=33.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~ 650 (944)
+....+++.+.++.|+++|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345589999999999999999999999988877766654
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.19 Score=51.29 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=33.8
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002275 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (944)
Q Consensus 610 ~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~ 650 (944)
++-++.+++.+++++|+++|+++.++|..+......+....
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 34579999999999999999999999998877666555443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.28 Score=62.30 Aligned_cols=123 Identities=9% Similarity=-0.006 Sum_probs=80.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
.+-|++.+.++.|+++|++++++|+.....+....+..|+....-. .++.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~----------------------------- 210 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVS----------------------------- 210 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEE-----------------------------
Confidence 3679999999999999999999999999888888888887311000 0000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Ee
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am 769 (944)
.. -+.+.-| +-=..+++.++...+++++|||..+|+.+=+.||+-. ++
T Consensus 211 ------~~-----------------------~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 211 ------AD-----------------------AFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred ------Cc-----------------------ccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 00 0001112 2223445555555678999999999999999999853 44
Q ss_pred c-ccchHHHhh-hCcEeeccccchhHH
Q 002275 770 S-GREGLQAAR-AADYSIGKFRFLKRL 794 (944)
Q Consensus 770 ~-gn~~~~~k~-~Ad~v~~~~~~l~~l 794 (944)
. +....+... .+|+++.+...+...
T Consensus 262 ~~~~~~~~L~~~~a~~vi~~l~el~~~ 288 (1057)
T PLN02919 262 TTTLSEEILKDAGPSLIRKDIGNISLS 288 (1057)
T ss_pred CCCCCHHHHhhCCCCEEECChHHCCHH
Confidence 2 222233333 678998887665433
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.70 E-value=1.2 Score=46.54 Aligned_cols=45 Identities=20% Similarity=0.266 Sum_probs=39.7
Q ss_pred eEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002275 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (944)
Q Consensus 606 G~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~ 650 (944)
|.+.-.+.+-|++.++|+.|+++|++++++||++..+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888777764
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.22 Score=48.56 Aligned_cols=27 Identities=19% Similarity=0.405 Sum_probs=23.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQ 640 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (944)
+-|++.++|++|+++|+++.++|..+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 348999999999999999999997554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.17 Score=52.59 Aligned_cols=174 Identities=15% Similarity=0.122 Sum_probs=70.4
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCC---------HHHHHHHHHHHH--
Q 002275 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT---------EDEVCRSLERVL-- 680 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi-~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-- 680 (944)
.+.+++.+++++|.+..- .|+|+|||+.........--++.--...|..+...+.. ..+....+...+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 566788999999987744 89999999998855553322221111112222222221 011111122211
Q ss_pred --HHhhcccCCCCcEEEEEcch---------hHHHHHHHHHHHHHhh-h-hccceeEEEEeChh--hHHHHHHHHhhc-C
Q 002275 681 --LTMRITTSEPKDVAFVVDGW---------ALEIALKHYRKAFTEL-A-ILSRTAICCRVTPS--QKAQLVELLKSC-D 744 (944)
Q Consensus 681 --~~~~~~~~~~~~~~lv~~~~---------~~~~~~~~~~~~~~~~-~-~~~~~~v~~~~~p~--~K~~iv~~l~~~-~ 744 (944)
....-..-+.+...+...-. ......+.+.+..... . ......-..++.|. .|+.+++.+-+. +
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~ 178 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELP 178 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS-
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcC
Confidence 11111111223333333211 1122222222222111 0 11112223566665 599999987764 2
Q ss_pred ------CeEEEecCCccchhhhhhc------CeeEEecccch-HHHhhhCcEeecc
Q 002275 745 ------YRTLAIGDGGNDVRMIQKA------DIGVGISGREG-LQAARAADYSIGK 787 (944)
Q Consensus 745 ------~~v~~iGDg~ND~~ml~~A------~vgIam~gn~~-~~~k~~Ad~v~~~ 787 (944)
..++++||...|-.||+.. +++|-+ +... ....-.|+|-+.+
T Consensus 179 ~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V-~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 179 FAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKV-GSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --------EEEEESSHHHHHHHHTTTTS----EEEEE-S-----------------
T ss_pred ccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEE-Eeeccccccccccccccc
Confidence 3589999999999999874 556666 4332 1122256665543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.28 Score=51.27 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=37.9
Q ss_pred eEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH--HHHHHcCCC
Q 002275 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI--QIALSCNFI 653 (944)
Q Consensus 606 G~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~--~ia~~~gi~ 653 (944)
|.+.-..++-|++.+++++|+++|+++.++|..+...+. ....++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555566788999999999999999999999996654443 456777774
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.23 Score=50.76 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=25.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQ 640 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (944)
++.|++.+.++.|+++|++++++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5789999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.49 Score=51.84 Aligned_cols=27 Identities=30% Similarity=0.410 Sum_probs=24.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGD 638 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd 638 (944)
-++.|++.++++.|+++|++++|+|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 378899999999999999999999984
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.51 Score=44.54 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
...|++++=+..++++|++++++|.-+...+...+..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 5677888899999999999999999999999999999887
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.33 Score=49.01 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=27.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTA 643 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a 643 (944)
++.|++.++++.|+++|+++.++|+-+....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 4689999999999999999999998775543
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=91.25 E-value=0.64 Score=50.62 Aligned_cols=47 Identities=32% Similarity=0.489 Sum_probs=39.4
Q ss_pred eEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH---HHcCC
Q 002275 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNF 652 (944)
Q Consensus 606 G~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia---~~~gi 652 (944)
|++--.+.+-|++.++|++|+++|++++++|+++..+...++ +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 566566778899999999999999999999999987777766 45665
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.20 E-value=2.3 Score=44.49 Aligned_cols=155 Identities=14% Similarity=0.042 Sum_probs=82.1
Q ss_pred cccccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEE-EecCCCH-----H-------HHHHH
Q 002275 610 IEDRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL-SIDGKTE-----D-------EVCRS 675 (944)
Q Consensus 610 ~~d~lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~-~~~~~~~-----~-------~~~~~ 675 (944)
....+.++..+.+++|... ..-++|+|||+.........-.|+---...|..+ ..+|... . ++...
T Consensus 37 ~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~ 116 (266)
T COG1877 37 EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAI 116 (266)
T ss_pred cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHH
Confidence 3457778899999999888 4479999999999888776633331111122233 2333321 1 22223
Q ss_pred HHHHHHHhhcccCCCCcEEEEEcchhHHHH------HHHHHHHHHhh-hh--ccceeEEEEeChhhHHHHHHHHhhc---
Q 002275 676 LERVLLTMRITTSEPKDVAFVVDGWALEIA------LKHYRKAFTEL-AI--LSRTAICCRVTPSQKAQLVELLKSC--- 743 (944)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~------~~~~~~~~~~~-~~--~~~~~v~~~~~p~~K~~iv~~l~~~--- 743 (944)
++......+-..-+.+..++...-...+.. +.....+.... .. ..+..+-++-+-..|+.+++.+.+.
T Consensus 117 l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~ 196 (266)
T COG1877 117 LEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPF 196 (266)
T ss_pred HHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCC
Confidence 333333333222233344443322111111 01110111111 11 1233444444444799999966553
Q ss_pred -CCeEEEecCCccchhhhhhcC
Q 002275 744 -DYRTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 744 -~~~v~~iGDg~ND~~ml~~A~ 764 (944)
+..+++.||...|-.||+..+
T Consensus 197 ~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 197 DGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCcceecCCCCccHHHHHhhc
Confidence 335899999999999999987
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.71 E-value=0.32 Score=50.02 Aligned_cols=39 Identities=5% Similarity=0.077 Sum_probs=31.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
-++.+++.+.++.| ++++.++|+.+...+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35668999999998 4999999999887777777777763
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=90.51 E-value=0.42 Score=52.32 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~ 649 (944)
++.+++.++|+.|+++|+++.++|.-+...+..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3467899999999999999999999999988888876
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=90.41 E-value=2 Score=49.50 Aligned_cols=69 Identities=19% Similarity=0.221 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHHHhhhhhhhhhhh
Q 002275 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRT 806 (944)
Q Consensus 730 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l~l~~gr~~~~~~ 806 (944)
-++|..-++..........+.||+.||.|||+.|+.+.++ +.. +. --+..++....+++-.||..++-.
T Consensus 174 Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V-~~~-----~~--~~~~~~~~~~~~~fhdgrl~~~p~ 242 (497)
T PLN02177 174 GDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMV-PRT-----KC--EPLPRNKLLSPVIFHEGRLVQRPT 242 (497)
T ss_pred cHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEe-CCC-----CC--CcCCcccCCCceeeeCCcccCCCC
Confidence 3467766663321112237999999999999999999999 431 10 014455777778777899877754
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=88.09 E-value=2.1 Score=40.77 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=31.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQI 646 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~i 646 (944)
+|..++++.+..++++++|++++-+|+|+...+...
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 379999999999999999999999999997666443
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=88.05 E-value=1.8 Score=43.54 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=26.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
++.|++.+++++|++++ +.+++|..+........+.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999985 5667776554443334445554
|
2 hypothetical protein; Provisional |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=88.00 E-value=0.62 Score=48.03 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=27.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~ 642 (944)
++.-|++.+.++.++++|++|+++|||+...
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQ 144 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTC
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchh
Confidence 4667889999999999999999999998763
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.95 E-value=1.8 Score=41.85 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=35.7
Q ss_pred ccccCCChHHHHHHHHHcCCe--EEEEcCC-------ChhhHHHHHHHcCC
Q 002275 611 EDRLQDGVPETIETLRKAGIN--FWMLTGD-------KQNTAIQIALSCNF 652 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~--v~i~TGd-------~~~~a~~ia~~~gi 652 (944)
++++.++..+.+++|++.+.. ++|+|.- ....|..+.+.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 578899999999999999875 9999986 36778888888886
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.43 E-value=0.88 Score=46.75 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=73.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.|++.+.++.|+++|+.+.++|+.+...+.......|+...-..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~--------------------------------- 131 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDV--------------------------------- 131 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcch---------------------------------
Confidence 47889999999999999999999999999999999999998543211
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Ee
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am 769 (944)
++++... .-..=.|+-=....+.|.-...++++|.|+.+.+.+-+.||.-+ ++
T Consensus 132 ----~v~~~dv---------------------~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v 185 (221)
T COG0637 132 ----IVTADDV---------------------ARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGV 185 (221)
T ss_pred ----hccHHHH---------------------hcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEe
Confidence 0000000 00011244445667777666788999999999999999999886 44
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=87.02 E-value=0.63 Score=41.03 Aligned_cols=47 Identities=21% Similarity=0.264 Sum_probs=36.3
Q ss_pred eEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH---HHcCC
Q 002275 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNF 652 (944)
Q Consensus 606 G~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia---~~~gi 652 (944)
|++.-.+++-|++.++|+.|+++|++++++|..+..+...++ +.+|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 566667889999999999999999999999998876655554 55666
|
... |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.78 E-value=1.1 Score=44.56 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=30.2
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
..+.++.|++. +++.++||.+...+....+..|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 46899999875 899999999999999888888874
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=86.78 E-value=0.54 Score=43.10 Aligned_cols=33 Identities=12% Similarity=0.042 Sum_probs=28.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 644 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~ 644 (944)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567789999999999999999999999987644
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=86.20 E-value=1.1 Score=47.27 Aligned_cols=48 Identities=23% Similarity=0.336 Sum_probs=37.6
Q ss_pred eEeccccc----cCCChHHHHHHHHHcCCeEEEEcCCChhh---HHHHHHHcCCC
Q 002275 606 GVTAIEDR----LQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (944)
Q Consensus 606 G~i~~~d~----lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~ia~~~gi~ 653 (944)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 45545555 88899999999999999999999988776 44445566764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=85.58 E-value=13 Score=46.12 Aligned_cols=151 Identities=11% Similarity=0.002 Sum_probs=77.7
Q ss_pred cCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCC--------C-HHH----HHHHHHHH
Q 002275 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK--------T-EDE----VCRSLERV 679 (944)
Q Consensus 614 lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--------~-~~~----~~~~~~~~ 679 (944)
+.++..+++++|.+. +-.|+|+|||+..........+++.--...|..+...+. . ..+ +...++.+
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~ 612 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYF 612 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHH
Confidence 566788899999765 678999999999998877654332111111111111010 0 011 11222223
Q ss_pred HHHhhcccCCCCcEEEEEcchhH--H---HHHHHHHHHH-Hhh-h----hccceeEEEEeChh--hHHHHHHHHhhc---
Q 002275 680 LLTMRITTSEPKDVAFVVDGWAL--E---IALKHYRKAF-TEL-A----ILSRTAICCRVTPS--QKAQLVELLKSC--- 743 (944)
Q Consensus 680 ~~~~~~~~~~~~~~~lv~~~~~~--~---~~~~~~~~~~-~~~-~----~~~~~~v~~~~~p~--~K~~iv~~l~~~--- 743 (944)
.....-..-+.+..+++..-..- + ....+..++. ... . ......-..++.|. +|+.+++.+...
T Consensus 613 ~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~ 692 (797)
T PLN03063 613 TDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVH 692 (797)
T ss_pred HHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhh
Confidence 22222222344555555432211 1 1122222222 111 0 11122344577776 799988877642
Q ss_pred -------CCeEEEecCCc-cchhhhhhcC
Q 002275 744 -------DYRTLAIGDGG-NDVRMIQKAD 764 (944)
Q Consensus 744 -------~~~v~~iGDg~-ND~~ml~~A~ 764 (944)
..-|+|+||.. -|=.||+.-+
T Consensus 693 ~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 693 NKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred ccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 24689999975 4999998643
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=85.51 E-value=2 Score=42.67 Aligned_cols=38 Identities=8% Similarity=-0.030 Sum_probs=32.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++.+++.+++++|+ .+++++|+.+...+....+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46788999999997 479999999998888888888873
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=85.13 E-value=1.2 Score=46.71 Aligned_cols=42 Identities=7% Similarity=0.164 Sum_probs=38.3
Q ss_pred cC-CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC
Q 002275 614 LQ-DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (944)
Q Consensus 614 lr-~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~ 655 (944)
+| |++.+++++|+++|++++++|+.....+....+.+|+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y 188 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY 188 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc
Confidence 55 9999999999999999999999999999999999999653
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.17 E-value=6.9 Score=38.32 Aligned_cols=41 Identities=24% Similarity=0.435 Sum_probs=30.3
Q ss_pred EEeChhhHHHHHHHHhhcC---CeEEEecCCccchhhhhhcCee
Q 002275 726 CRVTPSQKAQLVELLKSCD---YRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 726 ~~~~p~~K~~iv~~l~~~~---~~v~~iGDg~ND~~ml~~A~vg 766 (944)
|.+.....+-+.+.+++.+ ....+|||...|+.+=..+++.
T Consensus 101 c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 101 CDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3444445566677777654 6789999999999988888876
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=84.01 E-value=3.9 Score=42.64 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=27.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~ 642 (944)
+.|.-|++.+..+.+++.|++|+++|||....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 35667899999999999999999999998643
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=82.43 E-value=26 Score=43.73 Aligned_cols=152 Identities=13% Similarity=0.080 Sum_probs=77.8
Q ss_pred cCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCH--------H-H----HHHHHHHH
Q 002275 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------D-E----VCRSLERV 679 (944)
Q Consensus 614 lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~--------~-~----~~~~~~~~ 679 (944)
+.+++.+++++|.+. +..|+|+|||+..........+++.--...|..+...+... . + +...++.+
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~ 702 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYF 702 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHH
Confidence 446778899999775 67899999999999888775544311111111211111100 0 1 11122222
Q ss_pred HHHhhcccCCCCcEEEEEcchhH--H---HHHHHHHHHH-Hhhh-----hccceeEEEEeChh--hHHHHHHHHhhc---
Q 002275 680 LLTMRITTSEPKDVAFVVDGWAL--E---IALKHYRKAF-TELA-----ILSRTAICCRVTPS--QKAQLVELLKSC--- 743 (944)
Q Consensus 680 ~~~~~~~~~~~~~~~lv~~~~~~--~---~~~~~~~~~~-~~~~-----~~~~~~v~~~~~p~--~K~~iv~~l~~~--- 743 (944)
.....-..-+.+...++..-..- + ....++.++. .... .+....-..++.|. +|+.+++.+...
T Consensus 703 ~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~ 782 (934)
T PLN03064 703 TERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVH 782 (934)
T ss_pred HhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhh
Confidence 22222222234444554332211 1 1122232332 1110 11122334566676 799988877652
Q ss_pred -------CCeEEEecCCcc-chhhhhhcCe
Q 002275 744 -------DYRTLAIGDGGN-DVRMIQKADI 765 (944)
Q Consensus 744 -------~~~v~~iGDg~N-D~~ml~~A~v 765 (944)
..-|+|+||... |=.|++.-.-
T Consensus 783 ~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~ 812 (934)
T PLN03064 783 SKSMTTPIDYVLCIGHFLGKDEDIYTFFEP 812 (934)
T ss_pred ccccCCCCCEEEEeCCCCCCcHHHHHHHhc
Confidence 245999999754 9999987543
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=81.79 E-value=14 Score=46.22 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=36.7
Q ss_pred EEEEeChh--hHHHHHHHHhhc----CCeE-EEecCCcc-chh-hhhhcCeeEEecc
Q 002275 724 ICCRVTPS--QKAQLVELLKSC----DYRT-LAIGDGGN-DVR-MIQKADIGVGISG 771 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l~~~----~~~v-~~iGDg~N-D~~-ml~~A~vgIam~g 771 (944)
-+.++.|. .|++.+++|..+ -..| +++||+-| |.+ ||.--+-+|-+.|
T Consensus 946 ~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 946 TRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred cEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 56788887 699999998875 2344 66999999 955 7777788887755
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 944 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-15 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-15 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-15 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-14 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 5e-12 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-11 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-08 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 9e-06 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 944 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-39 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-04 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-38 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 9e-05 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-32 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-29 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-28 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 5e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 6e-07 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-06 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-06 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-06 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-06 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 5e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 6e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 1e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 2e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 3e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 1e-39
Identities = 100/440 (22%), Positives = 142/440 (32%), Gaps = 94/440 (21%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVM 434
I +DKTGTLT+NRM + +T + S V+
Sbjct: 380 TSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSG----QTFDQSSETWRALCRVL 435
Query: 435 AVCNTVIPAKSKAGAILYKAQSQD------EEALVHAAAQLHMVLVNKNASILEIKFNGS 488
+CN A K+G + E AL+ + NA +
Sbjct: 436 TLCNR---AAFKSGQDAVPVPKRIVIGDASETALLKFSELTLG-----NAMGYRER---- 483
Query: 489 VLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ---- 538
+ + + F S K + D L+ KGA E +L GQ
Sbjct: 484 ---FPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPL 540
Query: 539 ---QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVC 595
F A LG R L + E +Y EA +
Sbjct: 541 DEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNF------------ 588
Query: 596 QRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
L G+ ++ D R VP+ + R AGI M+TGD TA IA S I
Sbjct: 589 --PTSGLSFAGLVSMIDPPR--ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALEIA 705
S E + L + A V++G L A
Sbjct: 645 SE-------------GSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEA 691
Query: 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765
L+ + + R +P QK +VE + GDG ND ++KADI
Sbjct: 692 LRTH-----------PEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADI 740
Query: 766 GV--GISGREGLQAAR-AAD 782
GV GI+G + AA+ AAD
Sbjct: 741 GVAMGIAGSD---AAKNAAD 757
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-04
Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + + + +A CL +++ +T L + + AV + +
Sbjct: 102 FARQLAGGLQ-CLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQ 160
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
++ K+ + V++ G K I + + VG++V ++ D VP D
Sbjct: 161 EF-------KS-TNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPAD 212
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
+ ++ V+ ++L GE
Sbjct: 213 IRILQAQG----RKVDNSSLTGE 231
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-38
Identities = 102/442 (23%), Positives = 144/442 (32%), Gaps = 98/442 (22%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGG-IFYGNETGDALKDVGLLNAITSGSPDVIRFLTV 433
I +DKTGTLT+NRM I + T + A S +
Sbjct: 375 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG-----AAFDKTSATWSALSRI 429
Query: 434 MAVCN--TVIPAKSKAGAILYKAQSQD--EEALVHAAAQL---HMVLVNKNASILEIKFN 486
A+CN + + D E AL+ + ++N I+EI FN
Sbjct: 430 AALCNRAVFQAGQDNVPILKRSVAG-DASESALLKCIELCCGSVQGMRDRNPKIVEIPFN 488
Query: 487 GSVLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ-- 538
S K + + L+ KGA E IL G
Sbjct: 489 ---------------STNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEE 533
Query: 539 -----QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
F A + LG R L + ED+Y E + +
Sbjct: 534 PLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFP--------- 584
Query: 594 VCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
DL +G+ A+ D R VP+ + R AGI M+TGD TA IA
Sbjct: 585 -----TTDLCFVGLMAMIDPPR--AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALE 703
IS +E + L + A VV G L+
Sbjct: 638 IISE-------------GNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684
Query: 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 763
L ++ + R +P QK +VE + GDG ND ++KA
Sbjct: 685 DILHYH-----------TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA 733
Query: 764 DIGV--GISGREGLQAAR-AAD 782
DIGV GISG + ++ AAD
Sbjct: 734 DIGVAMGISGSD---VSKQAAD 752
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 9e-05
Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + L I C + + L + + V + +
Sbjct: 97 FCRQLFGGFS-ILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQ 155
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
+ K+ + + V++ G K I ++ + G++V ++ D +P D
Sbjct: 156 EA-------KS-SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPAD 207
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
L +I C V+ ++L GE
Sbjct: 208 LRIISAHG----CKVDNSSLTGE 226
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 1e-32
Identities = 85/425 (20%), Positives = 140/425 (32%), Gaps = 130/425 (30%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
TAI E++A ++ + +DKTGTLT N++ + + G E L
Sbjct: 315 TAI-EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLL------------- 360
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNASILEI 483
A+ + + ++QD + A+V A
Sbjct: 361 -------FAAMAS--------------RVENQDAIDAAMVGMLADPKEARAG-------- 391
Query: 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543
+ L F KR ++ D SGN +SKGA E IL A A
Sbjct: 392 --------IREVHFLPFNPVDKRTALTYID-GSGNWHRVSKGAPEQILELAKASNDLSKK 442
Query: 544 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602
V + +++Y++ GLR+L +A + V E +
Sbjct: 443 VLSIIDKYAERGLRSLAVARQVVPEKTKES-------------------------PGAPW 477
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA----LSCNFISPEPK 658
+ +G+ + D + ETI G+N M+TGD+ + + N
Sbjct: 478 EFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 537
Query: 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
V +E+ DG+A
Sbjct: 538 LGTHKDANLASIPVEELIEK------------------ADGFA----------------- 562
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
V P K ++V+ L+ + GDG ND ++KADIG+ ++ AA
Sbjct: 563 --------GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD--ATDAA 612
Query: 779 R-AAD 782
R A+D
Sbjct: 613 RGASD 617
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 1e-29
Identities = 89/433 (20%), Positives = 142/433 (32%), Gaps = 99/433 (22%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDV-------------GLLNAIT 421
I +DKTGTLT N+M + I G+ + +
Sbjct: 346 TSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRS 405
Query: 422 SGSPDVIRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNA 478
++ T+ A+CN + + G Y+ + E AL ++++
Sbjct: 406 GQFDGLVELATICALCNDSSLDFNETKGV--YEKVG-EATETALTTLVEKMNVFNTEVRN 462
Query: 479 SILEIKFNGSVL----QYEILETLEFTSDRKRMSVVVKD----CHSGNISLLSKGADEAI 530
+ N + TLEF+ DRK MSV + + KGA E +
Sbjct: 463 LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGV 522
Query: 531 LP---YAHAGQQTR--------TFVEAVEQYS--QLGLRTLCLAWREVEEDEYQEWSLMF 577
+ Y G + ++++ + LR L LA R+
Sbjct: 523 IDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE------- 575
Query: 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWML 635
+ + E DL +GV + D R V +I+ R AGI M+
Sbjct: 576 --------EMVLDDSSRFMEYETDLTFVGVVGMLDPPR--KEVMGSIQLCRDAGIRVIMI 625
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695
TGD + TAI I + + G+ D+ +
Sbjct: 626 TGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-----------L----PL------ 664
Query: 696 VVDGWALEIALKHYRKAFTELA-ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 754
E R RV PS K+++VE L+S D T GDG
Sbjct: 665 ------------------AEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706
Query: 755 NDVRMIQKADIGV 767
ND ++KA+IG+
Sbjct: 707 NDAPALKKAEIGI 719
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-28
Identities = 79/424 (18%), Positives = 134/424 (31%), Gaps = 134/424 (31%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
+AI E LA VE + +DKTGTLT+N++ G + D + L +
Sbjct: 364 SAI-ESLAGVEILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTACLAASRKKKGI 419
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
D I ++A + + + S+L
Sbjct: 420 DAI------------------------------DKAFLKSLKYY-----PRAKSVLS--- 441
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAH-----AGQQT 540
+Y++L+ F K++ VV+ G KGA +L +
Sbjct: 442 -----KYKVLQFHPFDPVSKKVVAVVES-PQGERITCVKGAPLFVLKTVEEDHPIPEEVD 495
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
+ + V +++ G R+L +A + E
Sbjct: 496 QAYKNKVAEFATRGFRSLGVARKRGEG--------------------------------- 522
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
++LG+ D + +T+ + G++ MLTGD A + + + +
Sbjct: 523 SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAE 582
Query: 661 LLS---IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717
L EV +E DG+A
Sbjct: 583 RLGLGGGGDMPGSEVYDFVEA------------------ADGFA---------------- 608
Query: 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777
V P K +VE+L+ Y GDG ND ++KAD G+ + G A
Sbjct: 609 ---------EVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEG--SSDA 657
Query: 778 ARAA 781
AR+A
Sbjct: 658 ARSA 661
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 5e-12
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP---YAHAGQQTRTF---- 543
+++ ++ + F +R+RMSVVV + ++ + L+ KGA + IL +
Sbjct: 55 RWQKIDEIPFDFERRRMSVVVAE-NTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIM 113
Query: 544 ----VEAVEQYSQLGLRTLCLAWREVEEDE 569
+ ++ GLR + +A + + E
Sbjct: 114 LRKIKRVTDTLNRQGLRVVAVATKYLPARE 143
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 4e-10
Identities = 87/682 (12%), Positives = 184/682 (26%), Gaps = 195/682 (28%)
Query: 99 NEKEVWVVKQGIKKLIQSQDIR--VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156
+ + V + +D++ +I+ E D +++ G + L
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEE-----IDHIIMSKDAVSGTLRLFWTLL 72
Query: 157 DGETDLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLL----PPFIDN 211
+ ++ + + + ++++ L+ IK E P R + L F
Sbjct: 73 SKQEEMVQKFVEEV-LRINYKFLMSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129
Query: 212 DVC----PLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDK 267
+V L ++ +L+ LR + V + G+ G + + A+D +
Sbjct: 130 NVSRLQPYLKLRQALLE---LRPAKN---VLID-------GVL-GSGKTWV-ALDVCLSY 174
Query: 268 LTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV-----IPLRFE-- 320
F+I + N + L Q P + I LR
Sbjct: 175 KVQCKMDFKIFWL----NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 321 ------LLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD-------TPSHATNTA 367
LL S + V L V + + + + T T
Sbjct: 231 QAELRRLLKSKPYENCLLV-LLNV---------QNAKAWNA-FNLSCKILLTTRFKQVTD 279
Query: 368 ISEDLAQVEYILTDKTGTLT--ENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
L + TLT E + + + D L + + +P
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKY------LDCRPQD------LPREVLTTNP 327
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
+ ++I + G + V +K +I+E
Sbjct: 328 RRL----------SIIAESIRDGLATWD--------------NWKHVNCDKLTTIIESS- 362
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545
L LE RK ++ P
Sbjct: 363 ---------LNVLEPAEYRKMF----DRL--------------SVFP------------P 383
Query: 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL--- 602
+ + L L W +V + + ++ K +L++++ + E + +
Sbjct: 384 SA----HIPTILLSLIWFDVIKSDVMV--VVNKLHKYSLVEKQPK--ESTISI-PSIYLE 434
Query: 603 ---KVLGVTAIEDRLQDGV-------PETIETLRKAGINFWML--------TGDKQNTAI 644
K+ A+ + D + + + + ++
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494
Query: 645 QIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR-----ITTSEPKDVAFVVDG 699
+ L F+ E K + D T S+ L ++ I ++PK V
Sbjct: 495 MVFLDFRFL--EQK---IRHDS-TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA- 547
Query: 700 WALEIALKHYRKAFTELAILSR 721
+ + E I S+
Sbjct: 548 ------ILDFLPKIEENLICSK 563
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 1e-08
Identities = 89/564 (15%), Positives = 155/564 (27%), Gaps = 175/564 (31%)
Query: 483 IKFNGSVLQY---EILETLE--FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 537
+ F QY +IL E F + KD S+LSK + I+ A
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDN-----FDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 538 QQTRTFV--------EAVEQYSQLGLRT----LCLAWREVEEDEYQEWSLMFKEASSTLI 585
T E V+++ + LR L + E ++ S+M +
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT----EQRQPSMMTRMYIEQR- 116
Query: 586 DREWRIAEV-----CQRLEHDLKVLGVTAIEDRLQDGVPE----------------TIET 624
DR + +V RL+ + L + P ++
Sbjct: 117 DRLYNDNQVFAKYNVSRLQP------YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 625 LRKAGIN-------FWMLTGDK----------QNTAIQIA--------------LSCNFI 653
+ FW+ + Q QI L + I
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 654 SPEPKGQLLSIDGKTE----DEVC--RSLE------RVLLTMRITTSEPKDVAFVVDGWA 701
E + L S + V ++ ++LLT R K V +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR-----FKQVTDFLSAAT 285
Query: 702 L-EIALKHYRKAFTE---LAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGGN 755
I+L H+ T ++L + + CR P + +
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLK-YLDCRPQDLPRE---------VLTTNPRRLS---- 331
Query: 756 DVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFY 815
+I S R+GL A ++ L +I S N +
Sbjct: 332 ---II-------AESIRDGL--ATWDNWKHVNCDKLTTIIES----SLNVLEPAEYRKMF 375
Query: 816 KSLLICF---IQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQ 872
L + F I +S + + + V ++ N + S ++K E T+
Sbjct: 376 DRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVV-NKLHKY-----SLVEKQPKESTISI 428
Query: 873 HP-QILFYCQAG-------RLLN----PSTFAGW-------FGRSLFHAIVAFVISIHVY 913
+ + +++ P TF H I H+
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH------IGHHLK 482
Query: 914 AYEKSE-MEEVSMVALSGCIWLQA 936
E E M MV L +L+
Sbjct: 483 NIEHPERMTLFRMVFLD-FRFLEQ 505
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 3e-06
Identities = 100/756 (13%), Positives = 201/756 (26%), Gaps = 263/756 (34%)
Query: 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ-----LWSLITPV 64
E + + + L L E +F+ + L+ L S I
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE------VLRINYKFLMSPIKTE 101
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV-GN 123
+ ++I ++D + + + ++Q + +L ++++ + G
Sbjct: 102 QRQPSMMTRMYIEQRDRL---YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG- 157
Query: 124 IVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIK 183
++G+ G KT + C + +++ K+
Sbjct: 158 ---------------VLGS----G---------------KTWVALDVC--LSYKVQCKMD 181
Query: 184 GVI------ECPGPDKDI-------RRFDGNLRLLPPFIDNDVCPLTI-------KNTIL 223
I C P+ + + D N N L I + +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI--KLRIHSIQAELRRLLK 239
Query: 224 QSCY------LRNTEWACGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQI 277
Y L N K+ +T T + D L+ A
Sbjct: 240 SKPYENCLLVLLNV-QNAKAWNAFNLSCKILLT--------TRFKQVTDFLSAA-----T 285
Query: 278 VVVIVLGTAGNVWKDTEARK---QWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVS 334
I L E + ++ PQ+ P L P S +I SI+
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----RRLS-IIAESIRDG 340
Query: 335 LDLVKSLYAKFIDWD-YEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393
L WD ++ ++ + T I L +E E R +F
Sbjct: 341 LAT----------WDNWKHVNCD------KLTTIIESSLNVLEP---------AEYRKMF 375
Query: 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYK 453
R +F P + IP + ++++
Sbjct: 376 DRL---SVF----------------------PP-----------SAHIP--TILLSLIWF 397
Query: 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD 513
+ + +V +LH S++E K ++ +
Sbjct: 398 DVIKSDVMVV--VNKLH------KYSLVE-------------------KQPKESTISIPS 430
Query: 514 CHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREV--EEDEYQ 571
+ + L K +E L H V+ Y+ +T + D+Y
Sbjct: 431 IY---LELKVKLENEYAL---HR--------SIVDHYNI--PKTFDS-DDLIPPYLDQYF 473
Query: 572 EWSLMF--KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAG 629
+ K +R + D + L + +R
Sbjct: 474 YSHIGHHLKNIEHPERMTLFR------MVFLDFRFLE----------------QKIRHDS 511
Query: 630 INFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSIDGKTEDEVCRSLERVLLTM--RIT 686
W +G NT Q+ +I +P + + ++ L + +
Sbjct: 512 TA-WNASGSILNTLQQLKFYKPYICDNDP----------KYERLVNAILDFLPKIEENLI 560
Query: 687 TSEPKDVAFVVDGWALEIALKH-----YRKAFTELA 717
S+ D+ L IAL + +A ++
Sbjct: 561 CSKYTDL--------LRIALMAEDEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 7e-05
Identities = 91/626 (14%), Positives = 190/626 (30%), Gaps = 176/626 (28%)
Query: 336 DLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395
D++ F+D +++ D + D P + +S+ ++++I+ K ++ +F
Sbjct: 20 DILSVFEDAFVD-NFDCKDVQ-DMP----KSILSK--EEIDHIIMSKD-AVSGTLRLF-- 68
Query: 396 CCIGGIF--YGNET-----GDAL-KDVG-LLNAIT----SGSPDVIRFL-TVMAVCNTV- 440
E + L + L++ I S ++ + N
Sbjct: 69 ----WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 441 ------IPAKSKAGAI---LYKAQSQDEEALVHAAAQLH-M------VLVNK--NASILE 482
+ + L + + + ++ + + + + ++
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRP--AKNVL-----IDGVLGSGKTWVALDVCLSYKVQ 177
Query: 483 IKFNGSVLQYEILETL-EFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAGQQ 539
K + + + + L S + ++ K + N + S + L +
Sbjct: 178 CKMDFKI--FWL--NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 540 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL-MFKEASSTLI---DR-------- 587
R +++ + Y CL V + + F + L+ +
Sbjct: 234 LRRLLKS-KPYEN------CLL---VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283
Query: 588 ----EWRIAEVCQRLEHD------LKVLGVTAIEDRLQ--DGVPETI----ETLR--KAG 629
+ L D LK L + + P + E++R A
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343
Query: 630 INFW-MLTGDKQNTAIQIALSCNFISPE------------PKG-----QLLSI---DGKT 668
+ W + DK T I+ +L N + P P LLS+ D
Sbjct: 344 WDNWKHVNCDKLTTIIESSL--NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401
Query: 669 ED--EVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICC 726
D V L + L + +PK+ + LE+ +K L R+ +
Sbjct: 402 SDVMVVVNKLHKYSLVEK----QPKESTISIPSIYLELKVK-----LENEYALHRSIVDH 452
Query: 727 RVTPSQKAQLVELLKSCD--YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784
P + +L+ Y IG ++ ++ + R D
Sbjct: 453 YNIP-KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF-----RMVFL-----D-- 499
Query: 785 IGKFRFLKRLILVHGRYSYNRTA----FLSQYSFYKSLLIC--------FIQIFFSFISG 832
FRFL++ I H ++N + L Q FYK IC + F+
Sbjct: 500 ---FRFLEQKI-RHDSTAWNASGSILNTLQQLKFYKP-YICDNDPKYERLVNAILDFLPK 554
Query: 833 LSGTSLFNS-------VSLMAYNVFY 851
+ +L S ++LMA +
Sbjct: 555 I-EENLICSKYTDLLRIALMAEDEAI 579
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 6e-07
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767
K Q V KS YR +A GD ND M+ +A G+
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
D K + + +ED ++ PETI L+++GI MLTGD + TA +A
Sbjct: 542 DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 50.1 bits (121), Expect = 1e-06
Identities = 9/47 (19%), Positives = 25/47 (53%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ + + I D + + + +E L+ G+ +L+GDK++ +++
Sbjct: 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 445 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 491
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 523 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 2e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 151 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 197
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 2e-06
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V GV A+ DR++ E I L+ GI MLTGD + A +A
Sbjct: 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 733 KAQLVELLKS-CDY-RTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAADYSIGKFR 789
K ++++LLK + + + IGDG D+ AD +G G Q A + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 790 FL 791
L
Sbjct: 218 EL 219
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 57/190 (30%)
Query: 602 LKVLGVTAIED-----RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656
LK + + ++ L +G E + L++ +G +
Sbjct: 59 LKNMPLKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DA 116
Query: 657 PKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715
L+ + L +T ++ + L ++
Sbjct: 117 AFSNTLIVENDA-------------LNGLVT--GH-----MMFSHSKGEMLLVLQRLL-- 154
Query: 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775
++ + TL +GDG ND+ M + A I + + +E L
Sbjct: 155 -----------NISKTN--------------TLVVGDGANDLSMFKHAHIKIAFNAKEVL 189
Query: 776 QAARAADYSI 785
+ A + I
Sbjct: 190 KQ--HATHCI 197
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 161 DTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 198
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
T+A+GDG ND+ M+ A +GV + ++A A ++
Sbjct: 263 NTVAVGDGANDLVMMAAAGLGVAYHAKPKVEA--KAQTAV 300
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
+A GDG ND+ M++ A G+ + ++ + I
Sbjct: 264 NIIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI 301
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 2e-04
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Query: 193 KDIRRFDGNLRLLPPFIDNDVCP-LTIKNTI 222
+ +++ +L+L D P L IK T+
Sbjct: 20 QALKKLQASLKLYAD----DSAPALAIKATM 46
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 733 KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766
K ++ L + + IGD DV + +D+
Sbjct: 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 185
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
+T+A+GDG ND+ M+ A +G+ + + L+ AD S+
Sbjct: 341 QTVAVGDGANDIDMLAAAGLGIAFNAKPALRE--VADASL 378
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 944 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.84 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.9 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.89 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.87 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.87 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.66 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.65 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.44 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.42 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.42 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.41 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.37 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.34 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.34 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.29 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.27 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.22 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.22 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.2 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.18 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.15 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.15 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.13 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.11 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.09 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.09 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.08 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.05 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.0 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.99 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.99 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.97 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.96 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.95 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.89 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.89 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.85 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.82 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.81 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.79 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.78 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.76 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.7 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.66 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.62 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.6 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.59 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.58 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.58 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.53 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.53 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.51 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.5 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.48 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.45 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.41 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.4 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.37 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.37 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.36 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.35 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.32 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.32 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.27 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.27 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.25 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.22 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.22 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.2 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.19 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.19 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.18 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.18 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.17 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.15 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.14 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.13 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.13 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.11 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.09 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.08 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.07 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.07 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.06 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.01 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.0 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.99 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.98 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.98 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.98 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.97 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.95 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.95 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.94 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.92 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.9 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.9 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.88 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.84 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.84 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.8 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.79 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.69 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.68 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.65 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.64 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.61 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.58 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.5 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.39 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.38 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.35 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.29 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.24 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.18 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.08 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.05 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.96 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.96 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.92 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.81 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.71 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.71 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.68 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.57 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.52 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.38 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.34 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.24 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.19 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.76 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.61 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.23 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.97 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.75 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.62 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 94.58 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 94.52 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 94.29 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 92.95 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.28 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 91.1 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 90.45 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 90.01 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 89.84 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 86.32 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 83.92 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 82.88 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 82.73 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 80.28 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-103 Score=978.71 Aligned_cols=797 Identities=20% Similarity=0.197 Sum_probs=606.5
Q ss_pred cccccCCCceeeeccc-cccccchHHHHHHHhhHHHHHHHHHHHHhhccccc-----c---cccccchhhhHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT-----P---VNPASTWGPLIFIFAVSAT 82 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~-----~---~~~~~~~~~l~~i~~i~~~ 82 (944)
+|+++||+|+++.++. ++| +.|++||+++++++++++++++++.... . .+.+...++++++++++++
T Consensus 80 ~rl~~~G~N~l~~~~~~~~~----~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 80 ELLLRDGPNALRPPRGTPEY----VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHhhCCCCCCCCCCCCHH----HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 6999999999998775 555 8899999999998888888877654211 0 1112234556667788999
Q ss_pred HHHHHHHHHhhhh---HHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCC
Q 002275 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (944)
Q Consensus 83 ~~~~~~~~~~~~~---~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGE 159 (944)
++++|++|++++. +++.+++++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+||||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGE 231 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCCC
Confidence 9999999988864 4556789999999999999999999999999999999999999997765 88999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEE
Q 002275 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (944)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~ 239 (944)
|.|+.|.+.. ....++..+|++|+||.+.+| .+.++|+
T Consensus 232 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~~f~GT~v~~G-~~~~vVv 269 (1034)
T 3ixz_A 232 SEPQTRSPEC-----------------------------------------THESPLETRNIAFFSTMCLEG-TAQGLVV 269 (1034)
T ss_pred CCCeeccCCC-----------------------------------------ccccccccccceecceeEEee-cceEEEE
Confidence 9999996421 111244678999999999999 6999999
Q ss_pred EecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhH
Q 002275 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (944)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (944)
+||.+|.+|++.. ..+.+++|+++.+++++..+..+++++++++++++..+ ...|...+..+
T Consensus 270 ~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 334 (1034)
T 3ixz_A 270 NTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI---------------GYTFLRAMVFF 334 (1034)
T ss_pred eehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cchHHHHHHHH
Confidence 9999999998754 45667899999999999988877777666665544221 12344555444
Q ss_pred HHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEE
Q 002275 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (944)
Q Consensus 317 ~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i 396 (944)
+ .+++.++|++||++++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 335 i---~l~v~~iPe~Lp~~vti~la~~~~------rmak~----~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~ 401 (1034)
T 3ixz_A 335 M---AIVVAYVPEGLLATVTVCLSLTAK------RLASK----NCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHL 401 (1034)
T ss_pred H---HHHHheeccccHHHHHHHHHHHHH------HHhhC----CeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEE
Confidence 3 377889999999988888877766 45444 3889999999999999999999999999999999999
Q ss_pred EEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCc---eeeecCCccHHHHHHHHHhCCeEE
Q 002275 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVL 473 (944)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~---~~~~~~~p~e~all~~a~~~g~~~ 473 (944)
++++..+.......... ......++....++.++++||++....++++. -+...++|+|.|+++++...+...
T Consensus 402 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~ 477 (1034)
T 3ixz_A 402 WFDNHIHSADTTEDQSG----QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA 477 (1034)
T ss_pred EECCccccccCcccccc----cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCCh
Confidence 99876554322111000 01112345567889999999988765432211 123468999999999998765321
Q ss_pred EeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecC--CCcEEEEecCchhhcccccccC-----------Cch
Q 002275 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAG-----------QQT 540 (944)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~--~~~~~l~~KGa~e~i~~~~~~~-----------~~~ 540 (944)
.+....|+++..+||+|+||+|+++++... ++++.+|+|||||.|+++|... ..+
T Consensus 478 ------------~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~ 545 (1034)
T 3ixz_A 478 ------------MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWR 545 (1034)
T ss_pred ------------HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHH
Confidence 122456788999999999999998887543 4678999999999999999631 123
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHH
Q 002275 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (944)
Q Consensus 541 ~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~ 620 (944)
+.+.+.+++++.+|+||+++|+|.++++++.++.... .+..+..|+|++|+|+++++||+|+++++
T Consensus 546 ~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~--------------~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~ 611 (1034)
T 3ixz_A 546 EAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD--------------VEAMNFPTSGLSFAGLVSMIDPPRATVPD 611 (1034)
T ss_pred HHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc--------------hhhhhccccCcEEEEEEeccCCCchhHHH
Confidence 5578889999999999999999999876544321100 01123457999999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcch
Q 002275 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (944)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 700 (944)
+|++|+++||+++|+|||+..+|.++|+++|+..++.. ...+....... .............+++|.
T Consensus 612 aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~~~~----~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 612 AVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSE---------TVEDIAARLRV----PVDQVNRKDARACVINGM 678 (1034)
T ss_pred HHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCch---------HHHHHHHhhCc----cchhccccccceeEEecH
Confidence 99999999999999999999999999999999764321 11111110000 000011122334566676
Q ss_pred hHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc-cchHHHhh
Q 002275 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAAR 779 (944)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~k~ 779 (944)
.+....+. .+.+.....+..+|+|++|++|.++++.+++.|+.|+|+|||.||+|||+.||+|||| | |+.+.+|+
T Consensus 679 ~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM-g~ng~d~aK~ 754 (1034)
T 3ixz_A 679 QLKDMDPS---ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDAAKN 754 (1034)
T ss_pred hhhhCCHH---HHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe-CCccCHHHHH
Confidence 65543222 1222222334568999999999999999999999999999999999999999999999 6 89999999
Q ss_pred hCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhh
Q 002275 780 AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLV 858 (944)
Q Consensus 780 ~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~ 858 (944)
+||+|+.++++.... .+.+||++|.|+++++.|.+++|+...++.+++.++.. ..+++++|++|+|++++.+|+++
T Consensus 755 aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qiL~inl~~d~~pala 831 (1034)
T 3ixz_A 755 AADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSV---PLPLGCITILFIELCTDIFPSVS 831 (1034)
T ss_pred hcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999998887766 46799999999999999999999987777777666532 24689999999999999999999
Q ss_pred hhccCCCChhhhhcCCccccccc-cCCCCChHHHHHHHH-HHHHHHHHHHhhhhhhhcc-c---------------C--c
Q 002275 859 STIDKDLSEGTVMQHPQILFYCQ-AGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYAY-E---------------K--S 918 (944)
Q Consensus 859 ~~~~~~~~~~~~~~~p~~y~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~---------------~--~ 918 (944)
+++| |+++++|++||+ .+ ++.++++.+++..++ .++++++..++..+..+.. + . .
T Consensus 832 l~~e--~~~~~~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 906 (1034)
T 3ixz_A 832 LAYE--KAESDIMHLRPR---NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQ 906 (1034)
T ss_pred hhcC--CCChhhhhCCCC---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccc
Confidence 9998 689999999984 33 577899988766544 4666666555544433211 0 0 0
Q ss_pred c-----------------hhhhhHHHHHHHHHHHHHhhhe
Q 002275 919 E-----------------MEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 919 ~-----------------~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
+ ....+|++|++++++|+|+++.
T Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~ 946 (1034)
T 3ixz_A 907 DLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLI 946 (1034)
T ss_pred ccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 0 0136799999999999998763
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-102 Score=963.31 Aligned_cols=797 Identities=20% Similarity=0.221 Sum_probs=597.8
Q ss_pred cccccCCCceeeecc-ccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccc----c----ccccchhhhHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP----V----NPASTWGPLIFIFAVSAT 82 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~-~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~----~----~~~~~~~~l~~i~~i~~~ 82 (944)
+|+++||+|+++.++ .++| +.|++||++|++++++++++++++..... . +.+...++++++++++++
T Consensus 75 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 75 EILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 699999999999975 5666 78999999999998888888877642111 0 112223456677788999
Q ss_pred HHHHHHHHHhhhh---HHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCC
Q 002275 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (944)
Q Consensus 83 ~~~~~~~~~~~~~---~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGE 159 (944)
++++|++|+.++. +++.+++|+|+|||++++|++++|+|||||.|++||+|||||+|+++++ |.||||+||||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGE 226 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCC
Confidence 9999999876654 5567889999999999999999999999999999999999999995543 89999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEE
Q 002275 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (944)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~ 239 (944)
|.|+.|.+.. ....+++..|++|+||.+.+| ++.++|+
T Consensus 227 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~v~~GT~v~~G-~~~~~V~ 264 (1028)
T 2zxe_A 227 SEPQTRSPEF-----------------------------------------SSENPLETRNIAFFSTNCVEG-TARGVVV 264 (1028)
T ss_dssp CSCEECCSSC-----------------------------------------CCSSTTTCSSEECTTCEEEEE-EEEEEEE
T ss_pred CcceecccCC-----------------------------------------CCCCcccccceEEeCceEEcc-eEEEEEE
Confidence 9999996431 011245778999999999998 7999999
Q ss_pred EecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhH
Q 002275 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (944)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (944)
+||.+|.+|++.+ ..+.+++|+++.+++++.+++.+++++++++++++. |. ...|...+.++
T Consensus 265 ~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~--------------~~~~~~~~~~~ 329 (1028)
T 2zxe_A 265 YTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-IL--------------GYSWLEAVIFL 329 (1028)
T ss_dssp ECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT--------------TCCHHHHHHHH
T ss_pred EeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc--------------cCcHHHHHHHH
Confidence 9999999998654 456788999999999999988888777776665532 11 11344444444
Q ss_pred HHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEE
Q 002275 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (944)
Q Consensus 317 ~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i 396 (944)
++ +++.++|++||++++++..+++. +|.+. ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 330 i~---llv~~iP~~Lp~~vti~l~~~~~------~mak~----~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 396 (1028)
T 2zxe_A 330 IG---IIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 396 (1028)
T ss_dssp HH---HHHHHSCTTHHHHHHHHHHHHHH------HHHTT----TEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEE
T ss_pred HH---HHHHHcCchHHHHHHHHHHHHHH------HHhhC----CceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEE
Confidence 43 56677999999988888877766 45443 4899999999999999999999999999999999999
Q ss_pred EEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCC-c--eeeecCCccHHHHHHHHHhCCeEE
Q 002275 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAG-A--ILYKAQSQDEEALVHAAAQLHMVL 473 (944)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~-~--~~~~~~~p~e~all~~a~~~g~~~ 473 (944)
+..+..|.......... ......++....++.++++||++....+.++ . -....+||+|.|+++++++.+...
T Consensus 397 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~ 472 (1028)
T 2zxe_A 397 WFDNQIHEADTTENQSG----AAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV 472 (1028)
T ss_dssp EETTEEEECCCCTTCCS----CCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH
T ss_pred EECCeeeeccCCCCccc----cccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCH
Confidence 99887664321110000 0011123455678899999998776432211 0 112368999999999998753210
Q ss_pred EeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecC--CCcEEEEecCchhhcccccccC-----------Cch
Q 002275 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAG-----------QQT 540 (944)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~--~~~~~l~~KGa~e~i~~~~~~~-----------~~~ 540 (944)
.+....|++++.+||+|+||||+++++... ++++.+|+|||||.|+++|... ..+
T Consensus 473 ------------~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~ 540 (1028)
T 2zxe_A 473 ------------QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMK 540 (1028)
T ss_dssp ------------HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHH
T ss_pred ------------HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHH
Confidence 011234677899999999999999998742 5678999999999999999631 113
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHH
Q 002275 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (944)
Q Consensus 541 ~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~ 620 (944)
+++.+.+++++.+|+||+++|+|.++++++.++. .. +++ ..+..|.|++|+|+++++||+|+++++
T Consensus 541 ~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~ 606 (1028)
T 2zxe_A 541 EAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPD 606 (1028)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc-chh-----hhhhhhcCeEEEeeeccCCCCChhHHH
Confidence 4577889999999999999999999764322100 00 000 011346899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhc-ccCCCCcEEEEEcc
Q 002275 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRI-TTSEPKDVAFVVDG 699 (944)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lv~~~ 699 (944)
+|++|+++||++||+|||+..+|.++|+++|+...+.. ...+..... .... ..........+++|
T Consensus 607 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~~-----~~~~~~~~~~~~~~~vi~G 672 (1028)
T 2zxe_A 607 AVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TIEDIAARL-----NIPIGQVNPRDAKACVVHG 672 (1028)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC---------CHHHHHHHT-----TCCGGGSCGGGCCEEEEEH
T ss_pred HHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch---------hHHHHHhhc-----CcchhhccccccceEEEEc
Confidence 99999999999999999999999999999999754332 111111100 0000 00111123456777
Q ss_pred hhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc-cchHHHh
Q 002275 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAA 778 (944)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~k 778 (944)
..+....+. .+.++.......+|+|++|++|..+++.+++.|+.|+|+|||.||+|||+.||+|||| | ++.+.++
T Consensus 673 ~~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm-g~~gtd~ak 748 (1028)
T 2zxe_A 673 SDLKDLSTE---VLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GISGSDVSK 748 (1028)
T ss_dssp HHHTTCCHH---HHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-SSSCCHHHH
T ss_pred HHhhhCCHH---HHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe-CCccCHHHH
Confidence 665433221 1222222233469999999999999999999999999999999999999999999999 7 6778788
Q ss_pred hhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHh
Q 002275 779 RAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL 857 (944)
Q Consensus 779 ~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 857 (944)
++||+|+.++++.... .+.+||++|.|+++++.|.++.|+...++.+++.++.. ..+++++|++|+|++++.+|++
T Consensus 749 ~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~ 825 (1028)
T 2zxe_A 749 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPAI 825 (1028)
T ss_dssp HHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHH
T ss_pred HhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cchhHHHHHHHHHHHHHHHHHH
Confidence 8999999887664433 47999999999999999999999876666555544432 2458999999999999999999
Q ss_pred hhhccCCCChhhhhcCCccccccccCCCCChHHHHH-HHHHHHHHHHHHHhhhhhhhcc-c----------------C-c
Q 002275 858 VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAG-WFGRSLFHAIVAFVISIHVYAY-E----------------K-S 918 (944)
Q Consensus 858 ~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~----------------~-~ 918 (944)
++++| ++++++|++||+ ..+.+.++++++++. ++..+++++++.++..++.++. . . .
T Consensus 826 al~~e--~~~~~~m~~~Pr--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 901 (1028)
T 2zxe_A 826 SLAYE--QAESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWIS 901 (1028)
T ss_dssp HGGGC--CCSSCGGGSCCC--CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCC
T ss_pred HhccC--ccchhhhccCCC--CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhcccccc
Confidence 99988 478899999884 223448999998876 4567888888777655443211 0 0 0
Q ss_pred ------c-----------hhhhhHHHHHHHHHHHHHhhhe
Q 002275 919 ------E-----------MEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 919 ------~-----------~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
+ ....+|++|++++++|+|+++.
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~ 941 (1028)
T 2zxe_A 902 DVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLII 941 (1028)
T ss_dssp CEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 1257899999999999999863
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-100 Score=947.43 Aligned_cols=802 Identities=21% Similarity=0.244 Sum_probs=591.3
Q ss_pred ccccccCCCceeeeccc-cccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccc--cccch---hhhHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTW---GPLIFIFAVSATKE 84 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~---~~l~~i~~i~~~~~ 84 (944)
++|+++||+|+++.+++ ++| +.|++||+++++++++++++++++..+.+.+ +...| +.++++++++.+++
T Consensus 31 ~~r~~~~G~N~l~~~~~~~~~----~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 106 (995)
T 3ar4_A 31 KRHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHCCSSCCCCCCCCHH----HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCccCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHH
Confidence 36999999999999765 565 8999999999999999999988876543311 11122 33444556678899
Q ss_pred HHHHHHHhhh---hHHhcceEEEEEECCe--EEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCC
Q 002275 85 AWDDYNRYLS---DKKANEKEVWVVKQGI--KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (944)
Q Consensus 85 ~~~~~~~~~~---~~~~~~~~~~V~r~g~--~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGE 159 (944)
+++++++.++ ++++.+.+++|+|||+ .++|++++|+|||||.|++||+|||||+|++.+ .|.|.||||+||||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~--s~~l~VdeS~LTGE 184 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGE 184 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCEEEECHHHHCC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEe--eceEEEEcccccCC
Confidence 9999987664 4566788999999887 699999999999999999999999999997543 34599999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEE
Q 002275 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (944)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~ 239 (944)
|.|+.|.+.+.. +++..+.+.+|++|+||.+.+| +++++|+
T Consensus 185 S~pv~K~~~~~~--------------------------------------~~~~~~~~~~~~v~~GT~v~~G-~~~~~V~ 225 (995)
T 3ar4_A 185 SVSVIKHTEPVP--------------------------------------DPRAVNQDKKNMLFSGTNIAAG-KALGIVA 225 (995)
T ss_dssp CSCEEECCSCCC--------------------------------------CTTCCGGGCTTEECTTCEEEEC-EEEEEEE
T ss_pred CcceeccccccC--------------------------------------CcccCcccccceEecCCEEEcc-eEEEEEE
Confidence 999999653210 1111234678999999999998 7999999
Q ss_pred EecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhh-hHh
Q 002275 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYEL-LVI 315 (944)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 315 (944)
+||.+|++|++.+ ..+.+++|+++.+++++.++.+++++++++.++++..+... ......|... ...
T Consensus 226 ~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 296 (995)
T 3ar4_A 226 TTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFND---------PVHGGSWIRGAIYY 296 (995)
T ss_dssp ECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGS---------CSSSSCHHHHHHHH
T ss_pred EcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------ccccchHHHHHHHH
Confidence 9999999998754 55677899999999999988888777776666554321100 0011122221 111
Q ss_pred HHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEE
Q 002275 316 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395 (944)
Q Consensus 316 ~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 395 (944)
+...+.+++.++|++||++++++..++.. +|.++ ++++|+++++|+||++++||||||||||+|+|+|++
T Consensus 297 ~~~ai~l~v~aiP~~Lp~~vt~~la~~~~------~ma~~----~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~ 366 (995)
T 3ar4_A 297 FKIAVALAVAAIPEGLPAVITTCLALGTR------RMAKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366 (995)
T ss_dssp HHHHHHHHHHHSCTTHHHHHHHHHHHHHH------HHHHT----TEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEE
T ss_pred HHHHHHHHHHhcCcchHHHHHHHHHHHHH------HhccC----CcEeccchhhhhhcCceEEEecCCCCcccCceEEEE
Confidence 12233467788999999888877777665 45443 488999999999999999999999999999999999
Q ss_pred EEEcCEeecCC--------CCCCCC-chhhhh----hhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHH
Q 002275 396 CCIGGIFYGNE--------TGDALK-DVGLLN----AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEAL 462 (944)
Q Consensus 396 i~~~~~~~~~~--------~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~al 462 (944)
++..+..++.. ++.... ..+... .....++...+++.++++||++.+..++++......+||+|.|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al 446 (995)
T 3ar4_A 367 MFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETAL 446 (995)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHH
T ss_pred EEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHH
Confidence 98765332210 000000 000000 00112345678889999999876543322222334589999999
Q ss_pred HHHHHhCCeEEEeecCcEEEEEE------CCeEEEEEEEEeecCCCCCCeeEEEEEecCCC----cEEEEecCchhhccc
Q 002275 463 VHAAAQLHMVLVNKNASILEIKF------NGSVLQYEILETLEFTSDRKRMSVVVKDCHSG----NISLLSKGADEAILP 532 (944)
Q Consensus 463 l~~a~~~g~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~----~~~l~~KGa~e~i~~ 532 (944)
++++++.|+ +...... +.... ......|++++.+||+|+||||+|+++..+++ ++.+|+|||||.|++
T Consensus 447 ~~~a~~~g~-~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~ 524 (995)
T 3ar4_A 447 TTLVEKMNV-FNTEVRN-LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVID 524 (995)
T ss_dssp HHHHHHHCT-TCCCCTT-SCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHH
T ss_pred HHHHHHcCC-ccccccc-cccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHH
Confidence 999998776 1110000 00000 00124588999999999999999999975431 578999999999999
Q ss_pred ccccC-----------CchhHHHHHHHHH--HhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHh
Q 002275 533 YAHAG-----------QQTRTFVEAVEQY--SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLE 599 (944)
Q Consensus 533 ~~~~~-----------~~~~~~~~~~~~~--~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 599 (944)
+|... ..++++.+.++++ +.+|+||+++|||+++..+.. ....+ ...++.+|
T Consensus 525 ~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~----------~~~~~-----~~~~~~~e 589 (995)
T 3ar4_A 525 RCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREE----------MVLDD-----SSRFMEYE 589 (995)
T ss_dssp TEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGG----------CCTTC-----GGGHHHHT
T ss_pred hcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccc----------ccccc-----chhhhhhc
Confidence 99631 1134577888899 999999999999998642200 00001 01235678
Q ss_pred ccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHH
Q 002275 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (944)
Q Consensus 600 ~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (944)
.|++|+|+++++|++|++++++|+.|+++||+++|+|||+..+|.++|+++|+...+.. + .+
T Consensus 590 ~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~--i---~~------------- 651 (995)
T 3ar4_A 590 TDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE--V---AD------------- 651 (995)
T ss_dssp CSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCC--C---TT-------------
T ss_pred cCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCc--c---cc-------------
Confidence 99999999999999999999999999999999999999999999999999999764321 0 00
Q ss_pred HHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhh
Q 002275 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (944)
Q Consensus 680 ~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~m 759 (944)
.+++|..++...++. +.++ ..+..+|+|++|++|.++|+.+++.|+.|+|+|||.||+||
T Consensus 652 ---------------~~~~g~~~~~l~~~~---~~~~--~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~a 711 (995)
T 3ar4_A 652 ---------------RAYTGREFDDLPLAE---QREA--CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 711 (995)
T ss_dssp ---------------TEEEHHHHHTSCHHH---HHHH--HHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHH
T ss_pred ---------------eEEEchhhhhCCHHH---HHHH--HhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHH
Confidence 022333222211110 1111 12467999999999999999999999999999999999999
Q ss_pred hhhcCeeEEecccchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccc
Q 002275 760 IQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL 838 (944)
Q Consensus 760 l~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (944)
|+.||+|||| |++.+.++++||+++.++++.... .+.+||++|.|+++++.|.+++|+...++.+++.++.. ..+
T Consensus 712 lk~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~p 787 (995)
T 3ar4_A 712 LKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEA 787 (995)
T ss_dssp HHHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCS
T ss_pred HHHCCeEEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cch
Confidence 9999999999 777777888999999887765444 47899999999999999999999987666666655422 246
Q ss_pred hhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCccccccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcc-c-
Q 002275 839 FNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY-E- 916 (944)
Q Consensus 839 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 916 (944)
++++|++|+|++++.+|+++++++ ++++++|++||. .+++.++++++++.|++.++++++++++..++.+.. .
T Consensus 788 l~~~qil~~nl~~d~~p~l~l~~~--~~~~~~m~~~P~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 862 (995)
T 3ar4_A 788 LIPVQLLWVNLVTDGLPATALGFN--PPDLDIMDRPPR---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAED 862 (995)
T ss_dssp SCHHHHHHHHHTTTHHHHHHHTTC--CCCTTGGGSCCC---CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC--CCChhHHhCCCC---CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 899999999999999999999887 467899999884 667889999999999999999988775433222110 0
Q ss_pred -------C-----------c-------c---hhhhhHHHHHHHHHHHHHhhh
Q 002275 917 -------K-----------S-------E---MEEVSMVALSGCIWLQAFVVA 940 (944)
Q Consensus 917 -------~-----------~-------~---~~~~~~~~f~~~~~~~~~~~~ 940 (944)
. . + ....+|++|++++++|+|+.+
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~ 914 (995)
T 3ar4_A 863 GPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNAL 914 (995)
T ss_dssp SCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHH
Confidence 0 0 0 124689999999999999864
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-95 Score=874.21 Aligned_cols=700 Identities=17% Similarity=0.206 Sum_probs=523.4
Q ss_pred cccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHHHHHHHHHHH
Q 002275 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (944)
Q Consensus 12 ~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~~~~~ 91 (944)
+|+++||+|+++.+++++| ..|++||++|++++++++++++++.. .+.....++++++++.++++++++++
T Consensus 95 ~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~g-----~~~~~~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 95 QRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGLE-----DWVDFGVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTCS-----CSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999998888877 78899999999877777777766532 22233455666778889999999998
Q ss_pred hhhhHHh---cceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeecc
Q 002275 92 YLSDKKA---NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (944)
Q Consensus 92 ~~~~~~~---~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~ 168 (944)
.++.+++ .+.+++|+|||++++|++++|+|||||.|++||+|||||+|++++ +.+.||||+|||||.|+.|
T Consensus 166 ~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K--- 239 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDK--- 239 (920)
T ss_dssp HHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEEC---
T ss_pred HHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEe---
Confidence 8875544 567899999999999999999999999999999999999999543 1269999999999999999
Q ss_pred ccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceee
Q 002275 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248 (944)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~ 248 (944)
..+|.+|+||.+.+| .+.++|++||.+|.+|
T Consensus 240 ------------------------------------------------~~gd~v~sGT~v~~G-~~~~~V~~tG~~T~~g 270 (920)
T 1mhs_A 240 ------------------------------------------------HKGDQVFASSAVKRG-EAFVVITATGDNTFVG 270 (920)
T ss_dssp ------------------------------------------------CSSCEECSCBCCSCC-CEEEEEEECSTTCSTT
T ss_pred ------------------------------------------------cCCCeeecCceEecc-eEEEEEEEeCCcCHHH
Confidence 346799999999998 7999999999999999
Q ss_pred ccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHHhcc
Q 002275 249 MTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSI 325 (944)
Q Consensus 249 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (944)
++.+ ..+.+++++++.++++..++++++++++++.++.++. ...++...+..+++ +++.
T Consensus 271 ~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~---------------~~~~~~~~l~~av~---llV~ 332 (920)
T 1mhs_A 271 RAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY---------------RSNPIVQILEFTLA---ITII 332 (920)
T ss_dssp TTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT---------------TTCCHHHHHHHHHH---HHHH
T ss_pred HHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCcHHHHHHHHHH---HHHH
Confidence 9765 4456779999999999988777666655554443211 11234444444433 6677
Q ss_pred ccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecC
Q 002275 326 MIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405 (944)
Q Consensus 326 ~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~ 405 (944)
++|++||+++.++..++.. +|.+. ++++|+++++|+||++++||||||||||+|+|+|.+++..+. +
T Consensus 333 aiP~aLp~~vti~la~g~~------~mak~----~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~-- 399 (920)
T 1mhs_A 333 GVPVGLPAVVTTTMAVGAA------YLAKK----KAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-V-- 399 (920)
T ss_dssp HSCCCHHHHHHHHHHHHHH------HHHHT----TCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-C--
T ss_pred hCchhHHHHHHHHHHHHHH------HHHhC----CeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-C--
Confidence 8999999777776666554 34333 378999999999999999999999999999999988753210 0
Q ss_pred CCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEE
Q 002275 406 ETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485 (944)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~ 485 (944)
++ .+++.+.++|+... . ..+||+|.|+++++++.+..
T Consensus 400 ------------------~~--~~ll~~a~l~~~~~----~------~~~~P~e~Al~~~~~~~~~~------------- 436 (920)
T 1mhs_A 400 ------------------DP--EDLMLTACLAASRK----K------KGIDAIDKAFLKSLKYYPRA------------- 436 (920)
T ss_dssp ------------------CC--THHHHHHHHSCCCS----S------CSCCSHHHHHHHHHHHSSSC-------------
T ss_pred ------------------CH--HHHHHHHHHhcCCc----c------cCCChHHHHHHHHHHhcccc-------------
Confidence 01 13456667776532 1 12499999999999876531
Q ss_pred CCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCC-----chhHHHHHHHHHHhccceEEEE
Q 002275 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-----QTRTFVEAVEQYSQLGLRTLCL 560 (944)
Q Consensus 486 ~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~-----~~~~~~~~~~~~~~~G~rvl~~ 560 (944)
.+....|++++.+||+|.+|+|+++++.. +|+.++++||||+.|+++|.... ..+.+.+.+++++.+|+||+++
T Consensus 437 ~~~~~~~~~~~~~pF~s~~k~ms~iv~~~-~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~v 515 (920)
T 1mhs_A 437 KSVLSKYKVLQFHPFDPVSKKVVAVVESP-QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGV 515 (920)
T ss_dssp CGGGSCCCEEEEEEEETTTTEEEEEECCS-SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEE
T ss_pred hhhccccceeEEeeccCCCCeEEEEEEeC-CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 11123467788999999999999999764 46678899999999999997421 1345778899999999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002275 561 AWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ 640 (944)
Q Consensus 561 A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (944)
|+|.. |.+++|+|+++++||+||+++++|++|+++||+++|+|||+.
T Consensus 516 A~~~~---------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~ 562 (920)
T 1mhs_A 516 ARKRG---------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAV 562 (920)
T ss_dssp CCCSS---------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCH
T ss_pred EEecc---------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCH
Confidence 98731 368999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhcc
Q 002275 641 NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720 (944)
Q Consensus 641 ~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 720 (944)
.+|.++|+++|+........-..+.|.. .++++.+ . ....
T Consensus 563 ~TA~aIA~~lGI~~~~~~~~~~~~~g~~---------------------------~~~~~el-----------~--~~~~ 602 (920)
T 1mhs_A 563 GIARETSRQLGLGTNIYNAERLGLGGGG---------------------------DMPGSEV-----------Y--DFVE 602 (920)
T ss_dssp HHHHHHHHHHTSSCSCCCSSSSSSCBCC---------------------------CGGGGGG-----------G--TTTT
T ss_pred HHHHHHHHHcCCCccccCccceeecCcc---------------------------cCCHHHH-----------H--HHHh
Confidence 9999999999996421000000011110 0011110 0 1123
Q ss_pred ceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-Hhhhh
Q 002275 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHG 799 (944)
Q Consensus 721 ~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~g 799 (944)
+..+|+|++|+||.++|+.+++.|+.|+|+|||.||+|||+.||+|||| |++.+.++++||+|+.++++.... .+.+|
T Consensus 603 ~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~ai~~g 681 (920)
T 1mhs_A 603 AADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIIDALKTS 681 (920)
T ss_dssp TTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHHHHHHH
T ss_pred hCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999 777777788999999987775444 47899
Q ss_pred hhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCccccc
Q 002275 800 RYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFY 879 (944)
Q Consensus 800 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~y~~ 879 (944)
|++|+|+++++.|.+..|+.......++.. +.|.+ +++.+++|.|++.+. |++++++++ ++.. +||+-
T Consensus 682 R~~~~ni~k~i~~~l~~n~~~~~~~~~~~~---~~~~~-l~~~~il~~~l~~d~-~~lal~~e~--~~~~---~~P~~-- 749 (920)
T 1mhs_A 682 RQIFHRMYAYVVYRIALSIHLEIFLGLWIA---ILNRS-LNIELVVFIAIFADV-ATLAIAYDN--APYS---QTPVK-- 749 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---SCSCC-CCHHHHHHHHHHHTT-HHHHCCCCC--SGGG---GSCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcc-CCHHHHHHHHHHHHH-HhhhhcccC--cccc---cCCCC--
Confidence 999999999999999888865332222222 33444 788899999988887 899999885 3332 33321
Q ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhccc-C----cchhhhhHHHHHHHHHHHHHhhhe
Q 002275 880 CQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE-K----SEMEEVSMVALSGCIWLQAFVVAL 941 (944)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~f~~~~~~~~~~~~~ 941 (944)
.+...++ ...+..+++.++..++..+..+... . ......+|++|++++++|+|+++.
T Consensus 750 ~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~ 811 (920)
T 1mhs_A 750 WNLPKLW-----GMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFI 811 (920)
T ss_dssp CCSSSCS-----SCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTS
T ss_pred chHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 1112222 1122334444443322222222211 1 112357899999999999999863
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-92 Score=850.88 Aligned_cols=683 Identities=18% Similarity=0.205 Sum_probs=502.6
Q ss_pred ccccccCCCceeeeccccccccchHHHHHHHhhHHHHHHHHHHHHhhccccccc--ccccchhhhHHHHHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV--NPASTWGPLIFIFAVSATKEAWDD 88 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~l~~i~~i~~~~~~~~~ 88 (944)
++|+++||+|+++.+++++| +.|++||++|++++++++++++++...... ..+.....++++++++.+++++++
T Consensus 39 ~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe 114 (885)
T 3b8c_A 39 EDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEE 114 (885)
T ss_dssp HHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTT
T ss_pred HHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 36999999999999887777 567789999998777788887776432110 112223445556667888899999
Q ss_pred HHHhhhhH---HhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceee
Q 002275 89 YNRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR 165 (944)
Q Consensus 89 ~~~~~~~~---~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K 165 (944)
+++.++.+ ++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.|
T Consensus 115 ~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~K 190 (885)
T 3b8c_A 115 NNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTK 190 (885)
T ss_dssp TTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCCB
T ss_pred HHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceEe
Confidence 98877654 446788999999999999999999999999999999999999995443 68999999999999999
Q ss_pred eccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCc
Q 002275 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (944)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T 245 (944)
..+|.+|+||.+.+| .+.++|++||.+|
T Consensus 191 ---------------------------------------------------~~g~~v~~GT~v~~G-~~~~~V~~tG~~T 218 (885)
T 3b8c_A 191 ---------------------------------------------------HPGQEVFSGSTCKQG-EIEAVVIATGVHT 218 (885)
T ss_dssp ---------------------------------------------------SSCCCCCSCCCCCSC-CCCCBCCSCTTTT
T ss_pred ---------------------------------------------------cCCCccccCeEEeee-EEEEEEEEcCccc
Confidence 346789999999999 7999999999999
Q ss_pred eeeccCCC--CCCccchHHHHHHHHHHHHHHHHHH-HHHHHHhhcchhcccccccceeeecCCCcchhhhhHhHHHHHHH
Q 002275 246 KLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIV-VVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (944)
Q Consensus 246 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (944)
.+|++.+. ...+++++++.+++++.+++...++ ++++.++.+.. ....+...+..+ +.+
T Consensus 219 ~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~---v~l 280 (885)
T 3b8c_A 219 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI---------------QRRKYRDGIDNL---LVL 280 (885)
T ss_dssp TSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT---------------TCSCSTTHHHHH---HHH
T ss_pred HHHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------ccCcHHHHHHHH---HHH
Confidence 99987652 2457799999999998764332222 22222222111 011233444333 347
Q ss_pred hccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEe
Q 002275 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (944)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (944)
++.++|++||++++++..++.. +|.+. ++++|+++++|+||++++||||||||||+|+|+|.+.++. .
T Consensus 281 lv~aiP~aLp~~vti~la~g~~------r~ak~----~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~ 348 (885)
T 3b8c_A 281 LIGGIPIAMPTVLSVTMAIGSH------RLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--V 348 (885)
T ss_dssp TTTTCCSSTTTHHHHTTTHHHH------HHTTT----SCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--S
T ss_pred HHHHhhhHHHHHHHHHHHHHHH------HHHhC----CeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--c
Confidence 8899999998877766655554 45443 4889999999999999999999999999999999642210 0
Q ss_pred ecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEE
Q 002275 403 YGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482 (944)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~ 482 (944)
+. ...+..+++...++|+... ++||+|.|+++++.+..
T Consensus 349 ~~------------------~~~~~~~ll~~aa~~~~~~------------~~~p~~~Al~~~~~~~~------------ 386 (885)
T 3b8c_A 349 FC------------------KGVEKDQVLLFAAMASRVE------------NQDAIDAAMVGMLADPK------------ 386 (885)
T ss_dssp SC------------------SSTTHHHHHHHHHHHCCSS------------SCCSHHHHHHHTTCCTT------------
T ss_pred cC------------------CCCCHHHHHHHHHHHhCCC------------CCCchHHHHHHHhhchh------------
Confidence 00 0111235667778887532 47999999998875311
Q ss_pred EEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC-CchhHHHHHHHHHHhccceEEEEE
Q 002275 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-QQTRTFVEAVEQYSQLGLRTLCLA 561 (944)
Q Consensus 483 ~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~G~rvl~~A 561 (944)
.....++.++.+||+|.+|||+++++.. +|+.++++||+||.++++|... ..++++.+.+++++.+|+||+++|
T Consensus 387 ----~~~~~~~~~~~~pF~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA 461 (885)
T 3b8c_A 387 ----EARAGIREVHFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVA 461 (885)
T ss_dssp ----CCCCSSCCBCCCCCCTTTCCCCCBBCSS-SSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEEC
T ss_pred ----hHhhcCceeecccCCcccceEEEEEEec-CCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEE
Confidence 1122355678899999999999998764 5667889999999999999743 335678889999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002275 562 WREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (944)
Q Consensus 562 ~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (944)
++++++++. +..|++++|+|+++++||+||+++++|++|+++||+++|+|||+..
T Consensus 462 ~~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~ 516 (885)
T 3b8c_A 462 RQVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 516 (885)
T ss_dssp CBCCCSSSS-------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHH
T ss_pred Eeccccccc-------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChH
Confidence 998865320 1346899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccc
Q 002275 642 TAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSR 721 (944)
Q Consensus 642 ~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (944)
+|.++|+++|+......... +.|...++ . ++...++.. ..+
T Consensus 517 tA~~iA~~lGi~~~~~~~~~--l~g~~~~~-----------------~-------~~~~~l~~~-------------~~~ 557 (885)
T 3b8c_A 517 IGKETGRRLGMGTNMYPSSA--LLGTHKDA-----------------N-------LASIPVEEL-------------IEK 557 (885)
T ss_dssp HHTHHHHTTTCTTCCSTTSS--CCBGGGGT-----------------T-------SCCSCHHHH-------------HHT
T ss_pred HHHHHHHHhCCccccCCcce--eecccccc-----------------c-------cchhHHHHH-------------Hhh
Confidence 99999999999643111000 11111000 0 001111111 123
Q ss_pred eeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhHH-Hhhhhh
Q 002275 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGR 800 (944)
Q Consensus 722 ~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr 800 (944)
..+|+|++|+||.++|+.+++.|+.|+|+|||.||+|||+.||+|||| |++.+.++++||+|+.++++.... .+.+||
T Consensus 558 ~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADivl~~~~~~~I~~ai~~gR 636 (885)
T 3b8c_A 558 ADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAVLTSR 636 (885)
T ss_dssp SCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC-SSSHHHHGGGCSSCCSSCSHHHHTHHHHTHH
T ss_pred CcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe-CCccHHHHHhcceeeccCchhHHHHHHHHHH
Confidence 568999999999999999999999999999999999999999999999 777777778999999988775544 478999
Q ss_pred hhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCcccccc
Q 002275 801 YSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYC 880 (944)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~y~~~ 880 (944)
++|+|+++++.|.+..|+...+..++..+ ++ ..++++++++|+|++.+..+ +++.+|+ ..+. +.|
T Consensus 637 ~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~--~~~l~p~~il~i~l~~d~~~-l~l~~~~--~~~~--~~p------ 701 (885)
T 3b8c_A 637 AIFQRMKNYTIYAVSITIRIVFGFMLIAL--IW--EFDFSAFMVLIIAILNDGTI-MTISKDR--VKPS--PTP------ 701 (885)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC--SSCSCHHHHHHHHHHHHTTT-CCCCCCC--CCCS--SCC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc--CcCcCHHHHHHHHHHHHHHH-Hhhcccc--cCcc--cCC------
Confidence 99999999999998877643222222222 11 13578999999999999876 6666664 2111 111
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHhhhhhh
Q 002275 881 QAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV 912 (944)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (944)
+.......+..+++.++++++..+++.++.
T Consensus 702 --~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 731 (885)
T 3b8c_A 702 --DSWKLKEIFATGVVLGGYQAIMTVIFFWAA 731 (885)
T ss_dssp --CSTTTTTTTTTHHHHHSSTHHHHTTSSSCT
T ss_pred --cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223344445566666666665544433
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-70 Score=648.67 Aligned_cols=490 Identities=19% Similarity=0.217 Sum_probs=389.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh---h---hHHhcceEEEEEE-CCeEEEEeeccCccccEEEEecCccccccEEEEeccCCC
Q 002275 74 IFIFAVSATKEAWDDYNRYL---S---DKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (944)
Q Consensus 74 ~~i~~i~~~~~~~~~~~~~~---~---~~~~~~~~~~V~r-~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~ 146 (944)
.+++++..+..+++.+.+++ + +.++.+++++|+| ||++++|++++|+|||+|.|++||+|||||+|+ +
T Consensus 192 ~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 266 (736)
T 3rfu_A 192 AVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ-----E 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEE-----E
Confidence 34444445555555555544 2 3345688999988 999999999999999999999999999999999 7
Q ss_pred ceEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecc
Q 002275 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (944)
Q Consensus 147 g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt 226 (944)
|.+.||||+|||||.|+.| ..++.+++||
T Consensus 267 G~~~VDES~LTGES~Pv~K---------------------------------------------------~~gd~v~~Gt 295 (736)
T 3rfu_A 267 GRSFVDESMVTGEPIPVAK---------------------------------------------------EASAKVIGAT 295 (736)
T ss_dssp SCEEEECSSSTTCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CceEeeecccCCccccEEe---------------------------------------------------ccCCcCCCce
Confidence 8899999999999999999 4467899999
Q ss_pred eeecCceEEEEEEEecCCceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeec
Q 002275 227 YLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (944)
Q Consensus 227 ~~~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (944)
.+.+| .+.+.|++||.+|.++++.+ ..+.+++|+++.+|+++.++++++++++++.+++|..+..
T Consensus 296 ~~~~G-~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~----------- 363 (736)
T 3rfu_A 296 INQTG-SFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP----------- 363 (736)
T ss_dssp EEESC-CCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-----------
T ss_pred Eeccc-eEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------
Confidence 99998 79999999999999998654 4556778999999999999999988888887776544321
Q ss_pred CCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCc
Q 002275 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (944)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKT 383 (944)
...+...+..++ .+++.++|++|++++.++...... ++.+ .++++|+++++|+||++|+||||||
T Consensus 364 --~~~~~~~l~~ai---~vlviacPcaL~la~p~a~~~~~~------~~a~----~gilvk~~~alE~l~~v~~i~fDKT 428 (736)
T 3rfu_A 364 --QPALSYGLIAAV---SVLIIACPCALGLATPMSIMVGVG------KGAQ----SGVLIKNAEALERMEKVNTLVVDKT 428 (736)
T ss_dssp --SSSTTHHHHHHH---HHHHHHCCSTHHHHHHHHHHHHHH------HHHH----TTEEESCHHHHHHHTSCCEEEECCB
T ss_pred --CchHHHHHHHHH---HhHHHhhhhHHHHHHHHHHHHHHH------HHhh----cceeechHHHHHHhcCCCEEEEeCC
Confidence 112333343333 367778999987777766655544 2322 3589999999999999999999999
Q ss_pred CcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHH
Q 002275 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (944)
Q Consensus 384 GTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all 463 (944)
||||+|+|+|.+++.++. + ..+++...+.+. +.++||.+.|++
T Consensus 429 GTLT~g~~~v~~i~~~~~----------------------~--~~~~l~~aa~le-------------~~s~hPla~Aiv 471 (736)
T 3rfu_A 429 GTLTEGHPKLTRIVTDDF----------------------V--EDNALALAAALE-------------HQSEHPLANAIV 471 (736)
T ss_dssp TTTBCSSCEEEEEEESSS----------------------C--HHHHHHHHHHHH-------------HSSCCHHHHHHH
T ss_pred CCCcCCceEEEEEEecCC----------------------C--HHHHHHHHHHHh-------------hcCCChHHHHHH
Confidence 999999999999873220 0 112222222111 236899999999
Q ss_pred HHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHH
Q 002275 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (944)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (944)
+++++.|..+ ....+|++..++... ... +|+ .+.+|+++.+.+... ....+
T Consensus 472 ~~a~~~~~~~---------------------~~~~~f~~~~g~gv~-~~~--~g~--~~~~G~~~~~~~~~~---~~~~~ 522 (736)
T 3rfu_A 472 HAAKEKGLSL---------------------GSVEAFEAPTGKGVV-GQV--DGH--HVAIGNARLMQEHGG---DNAPL 522 (736)
T ss_dssp HHHHTTCCCC---------------------CCCSCCCCCTTTEEE-ECS--SSS--CEEEESHHHHHHHCC---CCHHH
T ss_pred HHHHhcCCCc---------------------cCcccccccCCceEE-EEE--CCE--EEEEcCHHHHHHcCC---ChhHH
Confidence 9999877532 123356666654322 221 232 245699987765432 24567
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHH
Q 002275 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (944)
Q Consensus 544 ~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~ 623 (944)
.+..++++.+|+|++++| .|.+++|+++++|++|++++++|+
T Consensus 523 ~~~~~~~~~~G~~vl~va--------------------------------------~d~~~~G~i~i~D~i~~~~~~aI~ 564 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMA--------------------------------------VDGKTVALLVVEDPIKSSTPETIL 564 (736)
T ss_dssp HHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEECCBCSSHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEeeccchhhHHHHHH
Confidence 788899999999999999 577899999999999999999999
Q ss_pred HHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHH
Q 002275 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (944)
Q Consensus 624 ~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~ 703 (944)
+|+++|++++|+|||+..++..+++++|+
T Consensus 565 ~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi--------------------------------------------------- 593 (736)
T 3rfu_A 565 ELQQSGIEIVMLTGDSKRTAEAVAGTLGI--------------------------------------------------- 593 (736)
T ss_dssp HHHHHTCEEEEECSSCHHHHHHHHHHHTC---------------------------------------------------
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCC---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcE
Q 002275 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (944)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~ 783 (944)
..++++++|++|.++++.+++.++.|+|+|||.||+|||+.||+|||| |++.+.++++||+
T Consensus 594 ------------------~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAm-g~g~d~a~~~AD~ 654 (736)
T 3rfu_A 594 ------------------KKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAM-GTGTDVAIESAGV 654 (736)
T ss_dssp ------------------CCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEE-SSSCSHHHHHCSE
T ss_pred ------------------CEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEe-CCccHHHHHhCCE
Confidence 246778999999999999999999999999999999999999999999 8888889999999
Q ss_pred eeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHH
Q 002275 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 820 (944)
Q Consensus 784 v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~ 820 (944)
|+.+++.-... .+.+||.+++|+++++.|.+.+|++.
T Consensus 655 vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~ 692 (736)
T 3rfu_A 655 TLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLG 692 (736)
T ss_dssp EECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99877664444 46899999999999999999988764
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-68 Score=631.03 Aligned_cols=486 Identities=17% Similarity=0.212 Sum_probs=383.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhh------hhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCC
Q 002275 73 LIFIFAVSATKEAWDDYNRYL------SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (944)
Q Consensus 73 l~~i~~i~~~~~~~~~~~~~~------~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~ 146 (944)
.++++++..+.++++++.+++ ++.++.+++++|+|||++++|+++||+|||+|.|++||+|||||+|+ +
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----E 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----E
Confidence 333444445555666665544 34567889999999999999999999999999999999999999999 7
Q ss_pred ceEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecc
Q 002275 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (944)
Q Consensus 147 g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt 226 (944)
|.+.||||+|||||.|+.| ..++.+++||
T Consensus 174 G~~~VdeS~LTGES~Pv~K---------------------------------------------------~~g~~v~~Gt 202 (645)
T 3j08_A 174 GESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGAT 202 (645)
T ss_dssp CCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CcEEEEcccccCCCCceec---------------------------------------------------CCCCEeeccE
Confidence 7899999999999999999 4567899999
Q ss_pred eeecCceEEEEEEEecCCceeeccC---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeec
Q 002275 227 YLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (944)
Q Consensus 227 ~~~~g~~~~~~V~~tG~~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (944)
.+.+| ++.+.|++||.+|.++++. +..+.+++++++.+++++.+++++.++++++.+++|..+.
T Consensus 203 ~~~~g-~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------------ 269 (645)
T 3j08_A 203 INNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------------ 269 (645)
T ss_dssp EECSS-CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC------------
T ss_pred EEecC-cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 99988 7999999999999888764 4566778999999999999999888888887776653321
Q ss_pred CCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCc
Q 002275 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (944)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKT 383 (944)
+.++...+..+++ +++.++|++|++++.++...+.. ++.+ .++++|+++++|+||++++||||||
T Consensus 270 --~~~~~~~~~~~i~---vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKT 334 (645)
T 3j08_A 270 --HAPLLFAFTTLIA---VLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKT 334 (645)
T ss_dssp --SCSCCCTTTTTHH---HHHHHSCTTHHHHHHHHHHHHHH------HHHT----TCCCCSSTTHHHHGGGCCEEEEEGG
T ss_pred --CCcHHHHHHHHHH---HHHHHhhhHHHHHHHHHHHHHHH------HHHH----CCeEecCchHHHHhhCCCEEEEcCc
Confidence 1122233333333 56677899887777766665544 2332 3588999999999999999999999
Q ss_pred CcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHH
Q 002275 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (944)
Q Consensus 384 GTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all 463 (944)
||||+|+|++.+++..+. +..+++...+.|+ ..++||.+.|++
T Consensus 335 GTLT~~~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hPla~Aiv 377 (645)
T 3j08_A 335 GTLTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIV 377 (645)
T ss_dssp GTSSSSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHH
T ss_pred ccccCCCeEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------hcCCChhHHHHH
Confidence 999999999999976421 1123444444443 235799999999
Q ss_pred HHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHH
Q 002275 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (944)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (944)
+++++.|........ ++ ..+ .+... . ..+.+|+++.+.+... ..++.+
T Consensus 378 ~~a~~~g~~~~~~~~-------------~~---~~~----g~g~~--~--------~~v~~g~~~~~~~~~~--~~~~~~ 425 (645)
T 3j08_A 378 KKALEHGIELGEPEK-------------VE---VIA----GEGVV--A--------DGILVGNKRLMEDFGV--AVSNEV 425 (645)
T ss_dssp HHHHHTTCCCCSCCC-------------CE---EET----TTEEE--E--------TTEEEECHHHHHHTTC--CCCHHH
T ss_pred HHHHhcCCCcCCccc-------------eE---Eec----CCceE--E--------EEEEECCHHHHHhcCC--CccHHH
Confidence 999988764311110 00 000 00000 0 1145677766544321 224667
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHH
Q 002275 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (944)
Q Consensus 544 ~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~ 623 (944)
.+..+++..+|+|++++| .|++++|+++++|++||+++++|+
T Consensus 426 ~~~~~~~~~~g~~~l~va--------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~ 467 (645)
T 3j08_A 426 ELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQ 467 (645)
T ss_dssp HHHHHHHHTTTCCCEEEE--------------------------------------ETTEEEEEEEEECCCTTTHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEecCCchhHHHHHHH
Confidence 888999999999999999 578999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHH
Q 002275 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (944)
Q Consensus 624 ~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~ 703 (944)
+|+++|++++|+|||+..++..+++++|+
T Consensus 468 ~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi--------------------------------------------------- 496 (645)
T 3j08_A 468 ELKRMGIKVGMITGDNWRSAEAISRELNL--------------------------------------------------- 496 (645)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTC---------------------------------------------------
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHHcCC---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcE
Q 002275 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (944)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~ 783 (944)
..++++++|++|.++++.+++. +.|+|+|||.||+|||+.||+|||| |++.+.++++||+
T Consensus 497 ------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~ 556 (645)
T 3j08_A 497 ------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDI 556 (645)
T ss_dssp ------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE-CCCSCCSSCCSSS
T ss_pred ------------------CEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe-CCCcHHHHHhCCE
Confidence 3577889999999999999988 8999999999999999999999999 8888888889999
Q ss_pred eeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHH
Q 002275 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 820 (944)
Q Consensus 784 v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~ 820 (944)
++.+++.-... .+.+||++++|+++++.|.+.+|++.
T Consensus 557 vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~ 594 (645)
T 3j08_A 557 VLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVIL 594 (645)
T ss_dssp EESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876664333 36789999999999999999998863
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-68 Score=640.15 Aligned_cols=486 Identities=17% Similarity=0.212 Sum_probs=385.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhh------hhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCC
Q 002275 73 LIFIFAVSATKEAWDDYNRYL------SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (944)
Q Consensus 73 l~~i~~i~~~~~~~~~~~~~~------~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~ 146 (944)
.++++++..+.++++++.+++ ++.++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|+ +
T Consensus 177 ~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 251 (723)
T 3j09_A 177 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----E 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----E
Confidence 334444445556666666544 24566889999999999999999999999999999999999999999 7
Q ss_pred ceEEEEeccccCCCCceeeeccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecc
Q 002275 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (944)
Q Consensus 147 g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt 226 (944)
|.+.||||+|||||.|+.| ..++.+++||
T Consensus 252 G~~~VdeS~LTGES~pv~K---------------------------------------------------~~g~~v~~Gt 280 (723)
T 3j09_A 252 GESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGAT 280 (723)
T ss_dssp CCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CCeEEecccccCCCcceee---------------------------------------------------cCCCeeccce
Confidence 7899999999999999999 4567899999
Q ss_pred eeecCceEEEEEEEecCCceeeccC---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhcccccccceeeec
Q 002275 227 YLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (944)
Q Consensus 227 ~~~~g~~~~~~V~~tG~~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (944)
.+.+| ++.+.|++||.+|.++++. +..+.+++++++.+++++.++++++++++++.+++|..+.
T Consensus 281 ~~~~g-~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------------ 347 (723)
T 3j09_A 281 INNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------------ 347 (723)
T ss_dssp EECSS-CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST------------
T ss_pred EEecC-cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 99988 7999999999999888764 4567788999999999999999888888887776643321
Q ss_pred CCCcchhhhhHhHHHHHHHhccccceEEEeeHHHHHHHHHHhhccccccCCCCCCCCcccccccccccccceEEEEecCc
Q 002275 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (944)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~iP~~l~v~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~e~lg~v~~i~~DKT 383 (944)
..++...+..++ .+++.++|++|++++.++...+.. ++.+ .++++|+++++|+||++++||||||
T Consensus 348 --~~~~~~~~~~~i---~vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKT 412 (723)
T 3j09_A 348 --HAPLLFAFTTLI---AVLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKT 412 (723)
T ss_dssp --TCTTCCSHHHHH---HHHHHHSCTTHHHHHHHHHHHHHH------HHHT----TTCEESSTTHHHHGGGCCEEEEEHH
T ss_pred --CCcHHHHHHHHH---HHHHhhhhHHHHHHHHHHHHHHHH------HHHH----CCeEEeChHHHHHhhcCCEEEEcCC
Confidence 112333333333 366778999988777776665544 2322 3589999999999999999999999
Q ss_pred CcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHH
Q 002275 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (944)
Q Consensus 384 GTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all 463 (944)
||||+|+|+|.+++..+. +..+++...+.|+ ..++||.+.|++
T Consensus 413 GTLT~g~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hP~~~Ai~ 455 (723)
T 3j09_A 413 GTLTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIV 455 (723)
T ss_dssp HHTSCSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHH
T ss_pred CccccCceEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------ccCCCchhHHHH
Confidence 999999999999976421 1123344444443 235899999999
Q ss_pred HHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccCCchhHH
Q 002275 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (944)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (944)
+++++.|........ ++ ..+ .+... . ..+.+|+++.+.+... ..++.+
T Consensus 456 ~~a~~~~~~~~~~~~-------------~~---~~~----g~g~~--~--------~~~~~g~~~~~~~~~~--~~~~~~ 503 (723)
T 3j09_A 456 KKALEHGIELGEPEK-------------VE---VIA----GEGVV--A--------DGILVGNKRLMEDFGV--AVSNEV 503 (723)
T ss_dssp HHHHHTTCCCCSCCC-------------CE---EET----TTEEE--E--------TTEEEECHHHHHHTTC--CCCHHH
T ss_pred HHHHhcCCCcCCccc-------------eE---Eec----CCceE--E--------EEEEECCHHHHHhcCC--CccHHH
Confidence 999988764311110 00 000 00000 0 1245677766544322 224667
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCCChHHHHH
Q 002275 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (944)
Q Consensus 544 ~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~aI~ 623 (944)
.+.+++++.+|+|++++| .|++++|+++++|++|++++++|+
T Consensus 504 ~~~~~~~~~~g~~~~~va--------------------------------------~~~~~~G~i~i~D~~~~~~~~~i~ 545 (723)
T 3j09_A 504 ELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQ 545 (723)
T ss_dssp HHHHHHHHTTTCEEEEEE--------------------------------------ETTEEEEEEEEECCSCTTHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEeecCCcchhHHHHHH
Confidence 888999999999999999 578999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchhHH
Q 002275 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (944)
Q Consensus 624 ~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~ 703 (944)
+|+++|++++|+|||+..++..+++++|+
T Consensus 546 ~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi--------------------------------------------------- 574 (723)
T 3j09_A 546 ELKRMGIKVGMITGDNWRSAEAISRELNL--------------------------------------------------- 574 (723)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTC---------------------------------------------------
T ss_pred HHHHCCCEEEEECCCCHHHHHHHHHHcCC---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcE
Q 002275 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (944)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~ 783 (944)
..++++++|++|.++++.+++. +.|+|+|||.||+|||+.||+|||| |++.+.++++||+
T Consensus 575 ------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~ 634 (723)
T 3j09_A 575 ------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDI 634 (723)
T ss_dssp ------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEEC-CCCSCCSSCCSSE
T ss_pred ------------------cEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEe-CCCcHHHHHhCCE
Confidence 3577899999999999999988 8899999999999999999999999 8888888889999
Q ss_pred eeccccchhHH-HhhhhhhhhhhhhhhHHhhhhHHHHH
Q 002275 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 820 (944)
Q Consensus 784 v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~ 820 (944)
|+.++++-... .+.+||++++|+++++.|.+.+|++.
T Consensus 635 vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~ 672 (723)
T 3j09_A 635 VLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVIL 672 (723)
T ss_dssp ECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876664433 46899999999999999999999863
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5e-26 Score=240.67 Aligned_cols=138 Identities=22% Similarity=0.340 Sum_probs=117.1
Q ss_pred ccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHH
Q 002275 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (944)
Q Consensus 600 ~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (944)
.+..+.|.+.+.|+++|++.++|+.|+++|++++|+||++...+..+++.+|+.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------- 176 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-------------------------- 176 (263)
Confidence 345688999999999999999999999999999999999999999999998872
Q ss_pred HHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhh
Q 002275 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (944)
Q Consensus 680 ~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~m 759 (944)
.+|..+.|+.|..+++.++..++.++|+|||.||++|
T Consensus 177 -------------------------------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~a 213 (263)
T 2yj3_A 177 -------------------------------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213 (263)
Confidence 2334456899999999999888899999999999999
Q ss_pred hhhcCeeEEecccchHHHhhhCcEee--ccccchhHHHhhhhhhhhhhhhh
Q 002275 760 IQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAF 808 (944)
Q Consensus 760 l~~A~vgIam~gn~~~~~k~~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~~ 808 (944)
++.||+||++ |++.+.....||+++ .+...+..+ +..+|.++++++.
T Consensus 214 a~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 214 LALADVSVAM-GNGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 9999999999 776666667899999 444445443 5789988888754
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-24 Score=190.95 Aligned_cols=102 Identities=21% Similarity=0.293 Sum_probs=94.6
Q ss_pred hhhHHhcceEEEEEECCeEEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeecccccc
Q 002275 93 LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACM 172 (944)
Q Consensus 93 ~~~~~~~~~~~~V~r~g~~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~ 172 (944)
+++.++.+.+++|+|||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|
T Consensus 4 ~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~-----~g~~~vdeS~LTGEs~pv~k------- 71 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----EGESYVDESMISGEPVPVLK------- 71 (113)
T ss_dssp HHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----ECCEEEECHHHHCCSSCEEE-------
T ss_pred HHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EceEEEEccccCCCCccEEE-------
Confidence 456788899999999999999999999999999999999999999999 67799999999999999999
Q ss_pred CCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccC
Q 002275 173 GMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (944)
Q Consensus 173 ~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~ 251 (944)
..++.+|+||.+.+| .+.+.|++||.+|.++++.
T Consensus 72 --------------------------------------------~~g~~v~aGt~~~~G-~~~~~V~~~g~~T~~~~i~ 105 (113)
T 2hc8_A 72 --------------------------------------------SKGDEVFGATINNTG-VLKIRATRVGGETLLAQIV 105 (113)
T ss_dssp --------------------------------------------CTTCEECTTCEECSS-CEEEEEEECGGGSHHHHHH
T ss_pred --------------------------------------------CCCCEEEeCCEEeec-eEEEEEEEecCcCHHHHHH
Confidence 446789999999998 7999999999999998764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-22 Score=212.93 Aligned_cols=271 Identities=21% Similarity=0.267 Sum_probs=192.0
Q ss_pred CCCCcccccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhh
Q 002275 357 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAV 436 (944)
Q Consensus 357 ~~~~~~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (944)
.+.++++|++.++|.++++++||||||||||.+.+.+..++..+. + ..+++. +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------------------~--~~~~l~---~ 66 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------------------D--ERELLR---L 66 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------------------C--HHHHHH---H
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------------------C--HHHHHH---H
Confidence 345699999999999999999999999999999999988765421 0 112222 2
Q ss_pred cceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCC
Q 002275 437 CNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS 516 (944)
Q Consensus 437 c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~ 516 (944)
|.++. ..+.||.+.|+.+++++.|+..... ..+. ...| . .+. .
T Consensus 67 ~~~~e----------~~s~hp~~~a~~~~~~~~g~~~~~~--~~~~-~~~G-----------------~--~~~--~--- 109 (287)
T 3a1c_A 67 AAIAE----------RRSEHPIAEAIVKKALEHGIELGEP--EKVE-VIAG-----------------E--GVV--A--- 109 (287)
T ss_dssp HHHHT----------TTCCSHHHHHHHHHHHHTTCCCCCC--SCEE-EETT-----------------T--EEE--E---
T ss_pred HHHHh----------hcCCCHHHHHHHHHHHhcCCCcccc--ccce-eecC-----------------C--CeE--E---
Confidence 22221 2257999999999999888632110 0000 0000 0 000 0
Q ss_pred CcEEEEecCchhhcccccccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q 002275 517 GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 596 (944)
Q Consensus 517 ~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (944)
. .+.+|.++.+..... ..++.+.+..+.+..+|.++++++
T Consensus 110 ~---~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~i~~~----------------------------------- 149 (287)
T 3a1c_A 110 D---GILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVA----------------------------------- 149 (287)
T ss_dssp T---TEEEECHHHHHHTTC--CCCHHHHHHHHHHHHTTCEEEEEE-----------------------------------
T ss_pred E---EEEECCHHHHHhcCC--CccHHHHHHHHHHHhCCCeEEEEE-----------------------------------
Confidence 0 123354433222111 111345666788888999999998
Q ss_pred HHhccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHH
Q 002275 597 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSL 676 (944)
Q Consensus 597 ~~e~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 676 (944)
.+..++|.+...++++|++.++|+.|+++|++++++||++...+..+++.+|+.
T Consensus 150 ---~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------------------- 203 (287)
T 3a1c_A 150 ---RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------- 203 (287)
T ss_dssp ---ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------
T ss_pred ---ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------------------
Confidence 456789999999999999999999999999999999999999999999988872
Q ss_pred HHHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccc
Q 002275 677 ERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGND 756 (944)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND 756 (944)
.+|..+.|..|..+++.++.. +.+++|||+.||
T Consensus 204 ----------------------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~D 236 (287)
T 3a1c_A 204 ----------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGIND 236 (287)
T ss_dssp ----------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTC
T ss_pred ----------------------------------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHH
Confidence 234455688999999999888 899999999999
Q ss_pred hhhhhhcCeeEEecccchHHHhhhCcEee--ccccchhHHHhhhhhhhhhhh
Q 002275 757 VRMIQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRT 806 (944)
Q Consensus 757 ~~ml~~A~vgIam~gn~~~~~k~~Ad~v~--~~~~~l~~l~l~~gr~~~~~~ 806 (944)
++|.+.||++|++ +++.+..+..||+++ .+...+..+ +..+|.+++++
T Consensus 237 i~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i 286 (287)
T 3a1c_A 237 APALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKI 286 (287)
T ss_dssp HHHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHHH-HHTTC------
T ss_pred HHHHHHCCeeEEe-CCCCHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhh
Confidence 9999999999999 776555666899999 454445443 57888887776
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=184.04 Aligned_cols=104 Identities=16% Similarity=0.178 Sum_probs=93.6
Q ss_pred hhhhHHhcceEEEEEECCe------EEEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceee
Q 002275 92 YLSDKKANEKEVWVVKQGI------KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR 165 (944)
Q Consensus 92 ~~~~~~~~~~~~~V~r~g~------~~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K 165 (944)
.+++.++.+.+++|+|+|+ +++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 9 l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi-----~g~~~vdeS~LTGEs~pv~k 83 (124)
T 2kij_A 9 LAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVI-----EGHSMVDESLITGEAMPVAK 83 (124)
T ss_dssp HHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEEC-----SCCCEEECTTTTCCSSCEEC
T ss_pred HHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEE-----EccEEEEeccccCCCccEEe
Confidence 3456778899999999764 789999999999999999999999999999 67789999999999999999
Q ss_pred eccccccCCCHhhhccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCc
Q 002275 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (944)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T 245 (944)
..++.+|+||.+.+| .+.+.|++||.+|
T Consensus 84 ---------------------------------------------------~~g~~v~aGt~~~~G-~~~~~v~~~g~~T 111 (124)
T 2kij_A 84 ---------------------------------------------------KPGSTVIAGSINQNG-SLLICATHVGADT 111 (124)
T ss_dssp ---------------------------------------------------CTTEEECTTCEEESS-CCEEEECSCTTTC
T ss_pred ---------------------------------------------------CCCCEEEcCCEEeee-EEEEEEEEecccC
Confidence 456899999999998 6999999999999
Q ss_pred eeeccCC
Q 002275 246 KLGMTRG 252 (944)
Q Consensus 246 ~~~~~~~ 252 (944)
.++++.+
T Consensus 112 ~~~~I~~ 118 (124)
T 2kij_A 112 TLSQIVK 118 (124)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=207.72 Aligned_cols=273 Identities=25% Similarity=0.282 Sum_probs=185.8
Q ss_pred cccccccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecc
Q 002275 363 ATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIP 442 (944)
Q Consensus 363 ~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 442 (944)
+|++.++|.|++++.||||++||||.|++.|..+...+. ...+++..++.+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------------------------~~~~~~~~~~~~~---- 52 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------------------------SEDELLQIAASLE---- 52 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------------------------CHHHHHHHHHHHH----
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------------------------CHHHHHHHHHHhh----
Confidence 478889999999999999999999999999999875421 1122333333222
Q ss_pred cccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEE
Q 002275 443 AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLL 522 (944)
Q Consensus 443 ~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~ 522 (944)
..+.++...++.+.++..|..... ... +..++ .......+ ++.. +
T Consensus 53 ---------~~s~~~~~~a~~~~~~~~g~~~~~-------------~~~---~~~~~----g~~~~~~~----~~~~--~ 97 (280)
T 3skx_A 53 ---------ARSEHPIAAAIVEEAEKRGFGLTE-------------VEE---FRAIP----GKGVEGIV----NGRR--Y 97 (280)
T ss_dssp ---------TTCCSHHHHHHHHHHHHTTCCCCC-------------CEE---EEEET----TTEEEEEE----TTEE--E
T ss_pred ---------ccCCCHHHHHHHHHHHhcCCCCCC-------------ccc---eeecC----CCEEEEEE----CCEE--E
Confidence 124678888999999888753211 000 11111 11111111 1211 2
Q ss_pred ecCchhhcccccccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccc
Q 002275 523 SKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602 (944)
Q Consensus 523 ~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 602 (944)
..|.++.+....... .+...++...+.+++.++ .+.
T Consensus 98 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--------------------------------------~~~ 133 (280)
T 3skx_A 98 MVVSPGYIRELGIKT------DESVEKLKQQGKTVVFIL--------------------------------------KNG 133 (280)
T ss_dssp EEECHHHHHHTTCCC------CTTHHHHHTTTCEEEEEE--------------------------------------ETT
T ss_pred EEecHHHHHHcCCCc------hHHHHHHHhCCCeEEEEE--------------------------------------ECC
Confidence 235544443322111 133456777888888777 466
Q ss_pred eEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHH
Q 002275 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682 (944)
Q Consensus 603 ~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (944)
.++|.+.+.++++|++.++++.|+++|+++.++||++...+..+++.+|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl------------------------------ 183 (280)
T 3skx_A 134 EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------------------------ 183 (280)
T ss_dssp EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC------------------------------
T ss_pred EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC------------------------------
Confidence 78999999999999999999999999999999999999999999999887
Q ss_pred hhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhh
Q 002275 683 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK 762 (944)
Q Consensus 683 ~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~ 762 (944)
...|..+.|.+|...++.+.+.. .+++|||+.||++|++.
T Consensus 184 ---------------------------------------~~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 184 ---------------------------------------DDYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp ---------------------------------------SEEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred ---------------------------------------hhHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 23455667889999999888765 68999999999999999
Q ss_pred cCeeEEecccchHHHhhhCcEeeccccc--hhHHHhhhhhhhhhhhhhhHHhhh
Q 002275 763 ADIGVGISGREGLQAARAADYSIGKFRF--LKRLILVHGRYSYNRTAFLSQYSF 814 (944)
Q Consensus 763 A~vgIam~gn~~~~~k~~Ad~v~~~~~~--l~~l~l~~gr~~~~~~~~~~~~~~ 814 (944)
||+||+| |++.+.++..||+++..++. +..+ +..+|.++.+++.++.|.+
T Consensus 224 Ag~~va~-~~~~~~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~ 275 (280)
T 3skx_A 224 ADVGIAI-GAGTDVAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSH 275 (280)
T ss_dssp SSEEEEC-SCCSSSCCCSSSEECSSCCTHHHHHH-HHHHHTCCC----------
T ss_pred CCceEEe-cCCcHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999 88888888899999954444 4443 5778888888776665553
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.8e-18 Score=162.19 Aligned_cols=138 Identities=21% Similarity=0.256 Sum_probs=103.3
Q ss_pred HHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeE
Q 002275 429 RFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS 508 (944)
Q Consensus 429 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~s 508 (944)
+++...++|+.... ..+||+|.|+++++...+. ......|+++..+||+|+||||+
T Consensus 17 ~vl~~a~L~s~~~~----------~~~n~~d~Ail~~~~~~~~--------------~~~~~~~~~~~eiPFds~rKrms 72 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT----------GLKNLLDTAVLEGTDEESA--------------RSLASRWQKIDEIPFDFERRRMS 72 (170)
T ss_dssp HHHHHHHHHHHHCC----------SCCCHHHHHHHHTSCHHHH--------------HHHHHHSEEEEEECCCTTTCEEE
T ss_pred HHHHHHHHcCCCCC----------CCCChHHHHHHHHHHhcCh--------------hhhhhcCeEEeeEecCcccCcEE
Confidence 55666677764321 1379999999988754221 01124578899999999999999
Q ss_pred EEEEecCCCcEEEEecCchhhcccccccC-----------CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 002275 509 VVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (944)
Q Consensus 509 viv~~~~~~~~~l~~KGa~e~i~~~~~~~-----------~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~ 577 (944)
++++.. ++++.+++|||||.|+++|+.. ..++.+.+.+++|+.+|+|||++|||.++..+..
T Consensus 73 vv~~~~-~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~------ 145 (170)
T 3gwi_A 73 VVVAEN-TEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD------ 145 (170)
T ss_dssp EEEESS-SSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC------
T ss_pred EEEEeC-CCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc------
Confidence 999864 4678999999999999999731 1245788999999999999999999998753210
Q ss_pred HHHhcccchHHHHHHHHHHHHhccceEeeEeccccc
Q 002275 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 613 (944)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~ 613 (944)
. ....|+||+|+|++||-|.
T Consensus 146 ------~----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 ------Y----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp ------C----------CGGGSCSEEEEEEEEEEC-
T ss_pred ------c----------CccccCCcEEEehhccccc
Confidence 0 0135799999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4.3e-17 Score=175.74 Aligned_cols=142 Identities=14% Similarity=0.115 Sum_probs=102.1
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCC
Q 002275 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (944)
Q Consensus 610 ~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (944)
..+++||+++++++.|+++|+++.|+||+...++.++++++|+...+.. +. .+.....
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~--i~-~n~l~~~------------------- 195 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK--VV-SNFMDFD------------------- 195 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEE--EE-EECEEEC-------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccce--EE-eeeEEEc-------------------
Confidence 4579999999999999999999999999999999999999998654321 11 1100000
Q ss_pred CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhh---hcCee
Q 002275 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ---KADIG 766 (944)
Q Consensus 690 ~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~---~A~vg 766 (944)
.......+.+ .....+++..|.+|...+..++..++.|+|+|||.||+||++ .||+|
T Consensus 196 ~~~~~~~~~~--------------------~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advg 255 (297)
T 4fe3_A 196 ENGVLKGFKG--------------------ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHI 255 (297)
T ss_dssp TTSBEEEECS--------------------SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEE
T ss_pred ccceeEeccc--------------------cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeE
Confidence 0000000000 001223344566787888888888899999999999999954 89999
Q ss_pred EEecc-------cchHHHhhhCcEeeccccchhHH
Q 002275 767 VGISG-------REGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 767 Iam~g-------n~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
||| | ++.+.++++||+|+.++++....
T Consensus 256 iai-Gfl~~~v~~~~d~~~e~~Divl~~d~~~~v~ 289 (297)
T 4fe3_A 256 LKI-GYLNDRVDELLEKYMDSYDIVLVKEESLEVV 289 (297)
T ss_dssp EEE-EEECSSHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred EEE-EecchhHHHhHHHHHhhCCEEEECCCChHHH
Confidence 999 6 55556678999999998886644
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.2e-13 Score=141.98 Aligned_cols=178 Identities=20% Similarity=0.196 Sum_probs=111.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC---CC--CCCCeE---------EEecCCCHHHHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI---SP--EPKGQL---------LSIDGKTEDEVCRSLE 677 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~---~~--~~~~~~---------~~~~~~~~~~~~~~~~ 677 (944)
..+.+.+.++|++++++|++++++|||+...+..+...+|+. .+ ..+|.. +.......+.....++
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 467889999999999999999999999999999999999873 11 011111 1111122222222222
Q ss_pred HHHHH-hhc--------------------------------------ccCCCCcEEEEEcchhHHHHHHHHHHHHH-hhh
Q 002275 678 RVLLT-MRI--------------------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFT-ELA 717 (944)
Q Consensus 678 ~~~~~-~~~--------------------------------------~~~~~~~~~lv~~~~~~~~~~~~~~~~~~-~~~ 717 (944)
..... ... ......+..+..+........+.+.+.+. .+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN 180 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCE
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEE
Confidence 21111 000 00011112111111222333333333332 222
Q ss_pred hccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 718 ILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 718 ~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
...+...+.++.|. +|+..++.+.+. .+++++|||+.||++|++.||+|||| ||+.+++|+.||+|+.+++.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 181 VFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM-GNAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp EEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCGGG
T ss_pred EEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-CCCcHHHHHhCCEEcCCCCC
Confidence 23333446688887 698887777653 56899999999999999999999999 99999999999999987544
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=7.5e-13 Score=142.20 Aligned_cols=178 Identities=18% Similarity=0.214 Sum_probs=111.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEE--------ecCCCHHHHHHHHHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS--------IDGKTEDEVCRSLERVL 680 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~ 680 (944)
...+.+.+.++|++++++|++++++|||+...+..+...+|+..+ ..+|..+. ......+.....++...
T Consensus 21 ~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~ 100 (290)
T 3dnp_A 21 NGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLE 100 (290)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHHH
Confidence 346788999999999999999999999999999999999987522 01111221 11112222222222221
Q ss_pred HHhhcc------------c-------------------------------------CCCCcEEEEEcchhHHHHHHHHHH
Q 002275 681 LTMRIT------------T-------------------------------------SEPKDVAFVVDGWALEIALKHYRK 711 (944)
Q Consensus 681 ~~~~~~------------~-------------------------------------~~~~~~~lv~~~~~~~~~~~~~~~ 711 (944)
. .... . ....++.+..+........+.+.+
T Consensus 101 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~ 179 (290)
T 3dnp_A 101 S-YQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITK 179 (290)
T ss_dssp T-SSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHHH
T ss_pred H-cCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHh
Confidence 1 0000 0 000111111122223333333322
Q ss_pred HHHhhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEee
Q 002275 712 AFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (944)
Q Consensus 712 ~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~ 785 (944)
....+....+...+.++.|. +|+..++.+.+. .+.|++|||+.||++|++.||+|||| +|+.+++++.||+|+
T Consensus 180 ~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~ 258 (290)
T 3dnp_A 180 AFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM-GNAVPEIKRKADWVT 258 (290)
T ss_dssp HCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEEC
T ss_pred hCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe-cCCcHHHHHhcCEEC
Confidence 22333333334445677786 598888777653 46899999999999999999999999 999999999999999
Q ss_pred ccccc
Q 002275 786 GKFRF 790 (944)
Q Consensus 786 ~~~~~ 790 (944)
.+++.
T Consensus 259 ~s~~e 263 (290)
T 3dnp_A 259 RSNDE 263 (290)
T ss_dssp CCTTT
T ss_pred CCCCc
Confidence 87654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.8e-13 Score=144.65 Aligned_cols=178 Identities=16% Similarity=0.177 Sum_probs=102.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCC-----CCe--------EEEecCCCHHHHHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP-----KGQ--------LLSIDGKTEDEVCRSLER 678 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~ 678 (944)
..+.+.+.++|++++++|++++++|||+...+..+...+|+..+.. +|. .+.......+.....++.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 3678889999999999999999999999999999999998754211 111 122122222222222222
Q ss_pred HHHH-hhc--------------------------------------c-cCCCCcEEEEEcchhHHHHHHHHHHHHHh-hh
Q 002275 679 VLLT-MRI--------------------------------------T-TSEPKDVAFVVDGWALEIALKHYRKAFTE-LA 717 (944)
Q Consensus 679 ~~~~-~~~--------------------------------------~-~~~~~~~~lv~~~~~~~~~~~~~~~~~~~-~~ 717 (944)
.... ... . .....+..+..+........+.+.+.+.. +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 2111 000 0 00111111111222222333333222322 33
Q ss_pred hccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 718 ILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 718 ~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
.......+.++.|. +|+..++.+.+. .+.+++|||+.||++|++.||+|||| +|+.+++|+.||+|+.+++.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM-GNAIDEVKEAAQAVTLTNAE 258 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC-----
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-cCCCHHHHHhcceeccCCCc
Confidence 34445556788886 599888877653 46899999999999999999999999 99999999999999976543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.41 E-value=8.7e-13 Score=141.00 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=112.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEec-------CCCHHHHHHHHHHHHHH-
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID-------GKTEDEVCRSLERVLLT- 682 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~- 682 (944)
.+.+.++++|++++++|++++++|||+...+..+...++...+ ..+|..+... .-..+.....++.....
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 5889999999999999999999999999999998888765321 1112222222 22222222222222211
Q ss_pred -------------------------hhc--------------cc-CCCCcEEEEEcchhHHHHHHHHHHHHHh-hhhccc
Q 002275 683 -------------------------MRI--------------TT-SEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSR 721 (944)
Q Consensus 683 -------------------------~~~--------------~~-~~~~~~~lv~~~~~~~~~~~~~~~~~~~-~~~~~~ 721 (944)
... .. ....+..+..+........+.+.+.+.. +.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s 198 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAA 198 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEe
Confidence 000 00 1111222221333333333344444432 222333
Q ss_pred eeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 722 TAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 722 ~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
...+.++.|. +|+..++.+.+. .++|++|||+.||++|++.|++|||| +|+.+++|+.||+|+.+++.
T Consensus 199 ~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 199 GKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-SNARQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp TTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHHSSEEECCGGG
T ss_pred cCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-CCCCHHHHHhcCeECCCCCC
Confidence 3446788886 599888877653 46799999999999999999999999 99999999999999987655
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=139.29 Aligned_cols=178 Identities=20% Similarity=0.126 Sum_probs=110.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCC--------eEEEecCCCHHHHHHHHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG--------QLLSIDGKTEDEVCRSLERVLL 681 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 681 (944)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+ ..+| ..+.......+.....++....
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 46888999999999999999999999999999999999987532 0111 1221112222222211110000
Q ss_pred Hh--hc--c--------c------------------------CCCCcEEEEEc-c--hhHHHHHHHHHHHHHh-hhhccc
Q 002275 682 TM--RI--T--------T------------------------SEPKDVAFVVD-G--WALEIALKHYRKAFTE-LAILSR 721 (944)
Q Consensus 682 ~~--~~--~--------~------------------------~~~~~~~lv~~-~--~~~~~~~~~~~~~~~~-~~~~~~ 721 (944)
.. .. . . .......+.+. . .......+.+.+.+.. +.....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00 00 0 0 00001111222 2 2233333444444432 223333
Q ss_pred eeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcE--eeccccc
Q 002275 722 TAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--SIGKFRF 790 (944)
Q Consensus 722 ~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~--v~~~~~~ 790 (944)
...+.++.|. +|+..++.+.+. .+.+++|||+.||++|++.||+|||| +|+.+++|+.||+ |+.+++.
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na~~~vk~~A~~~~v~~sn~e 272 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANAHQRLKDLHPELEVIGSNAD 272 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCTTSEECCCGGG
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCCCHHHHHhCCCCEecccCCc
Confidence 4456788886 599888877653 46899999999999999999999999 9999999999984 6655443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=133.10 Aligned_cols=174 Identities=16% Similarity=0.149 Sum_probs=107.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEe-cCCCH-H----HHHHHHHHHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI-DGKTE-D----EVCRSLERVLLT 682 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~-~~~~~-~----~~~~~~~~~~~~ 682 (944)
..++.++++++|++|+++|++++++|||+...+..+++++|+..+ ..+|..+.. ++... . +....+ .....
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i-~~~~~ 98 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFL-EEMSK 98 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHH-HHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHH-HHHHH
Confidence 457889999999999999999999999999999999999987542 111222221 22211 0 112222 11111
Q ss_pred hhcccCC-------CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEE
Q 002275 683 MRITTSE-------PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLA 749 (944)
Q Consensus 683 ~~~~~~~-------~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~ 749 (944)
.. .... ......++-... ....+...+.+ .+... +...+.++.|. +|+..++.+.+. .+.+++
T Consensus 99 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~ 174 (227)
T 1l6r_A 99 RT-SMRSILTNRWREASTGFDIDPED-VDYVRKEAESR-GFVIF-YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILV 174 (227)
T ss_dssp TS-SCBCCGGGGGCSSSEEEBCCGGG-HHHHHHHHHTT-TEEEE-EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred Hh-cCCccccccceecccceEEecCC-HHHHHHHHHhc-CEEEE-ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEE
Confidence 00 0000 000000000000 11112222222 22222 33446788885 699988887753 367999
Q ss_pred ecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 750 iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
|||+.||++|++.|++||+| +|+.+++++.||+++.+++.
T Consensus 175 iGD~~nD~~m~~~ag~~va~-~n~~~~~k~~a~~v~~~~~~ 214 (227)
T 1l6r_A 175 IGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYSYG 214 (227)
T ss_dssp ECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCCTT
T ss_pred ECCcHHhHHHHHHcCceEEe-cCchHHHHHhCCEEecCCCC
Confidence 99999999999999999999 89988899999999986544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-12 Score=141.09 Aligned_cols=177 Identities=14% Similarity=0.124 Sum_probs=108.9
Q ss_pred ccCCC-hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEE-------ecCCCHHHHHHHHHHHHHH
Q 002275 613 RLQDG-VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-------IDGKTEDEVCRSLERVLLT 682 (944)
Q Consensus 613 ~lr~~-~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 682 (944)
.+.+. +.++|++++++|+.++++|||+...+..+...++...+ ..+|..+. ......+.....++.....
T Consensus 54 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 133 (304)
T 3l7y_A 54 SYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEK 133 (304)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEEEEecCCHHHHHHHHHHHHHh
Confidence 45666 78999999999999999999999998887776664211 00111221 1112223333222222221
Q ss_pred h-h--------------------------cc---------cC---CCC--cEEEEEcchhHHHHHHHHHHHHHh--hhhc
Q 002275 683 M-R--------------------------IT---------TS---EPK--DVAFVVDGWALEIALKHYRKAFTE--LAIL 719 (944)
Q Consensus 683 ~-~--------------------------~~---------~~---~~~--~~~lv~~~~~~~~~~~~~~~~~~~--~~~~ 719 (944)
. . .. .. ... +..+.......+...+.+.+.+.. +...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 213 (304)
T 3l7y_A 134 YPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGT 213 (304)
T ss_dssp CTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEEECCGGGHHHHHHHHHTSTTTTTEEEE
T ss_pred cCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEEEcCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 0 0 00 00 011 111222222333333333333332 3333
Q ss_pred cceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 720 SRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 720 ~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
.....+.++.|. +|+..++.+.+. .+++++|||+.||++|++.|++|||| +|+.+++|+.||+|+.+++.
T Consensus 214 ~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~e 289 (304)
T 3l7y_A 214 ASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-ANAPKNVKAAANYQAKSNDE 289 (304)
T ss_dssp ECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-TTSCHHHHHHCSEECCCGGG
T ss_pred EcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-CCcCHHHHHhccEEcCCCCc
Confidence 334456777776 599888877653 46799999999999999999999999 99999999999999987655
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-11 Score=129.40 Aligned_cols=176 Identities=18% Similarity=0.215 Sum_probs=105.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC-CCCCeEEEe-------cCCCHHHHHHHHHHHHHH-
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSI-------DGKTEDEVCRSLERVLLT- 682 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~- 682 (944)
..+.+.+.++|++++++|++++++|||+...+..+..++++... ..+|..+.. .....+.....++.....
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 46788899999999999999999999999999999888875321 111222222 122222222222221110
Q ss_pred hhc--ccCC---------------------------------CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEE
Q 002275 683 MRI--TTSE---------------------------------PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR 727 (944)
Q Consensus 683 ~~~--~~~~---------------------------------~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 727 (944)
... .... .....+.+.+... ......+.++.+....+.+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e 176 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAE--EEEPYVRNYPEFRFVRWHDVSTD 176 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHH--HHHHHHHHCTTEEEEEEETTEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHH--HHHHHHHhCCCeEEEEeCCceEE
Confidence 000 0000 0011111211110 01111111222211222334567
Q ss_pred eChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 728 VTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 728 ~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+.|. +|+..++.+.+. .+++++|||+.||++|++.||+|||| ||+.+++|+.||+|+.+++.
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKPVDK 244 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECCGGG
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCCCCc
Confidence 7776 598888777653 56899999999999999999999999 89999999999999976554
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=130.54 Aligned_cols=175 Identities=14% Similarity=0.152 Sum_probs=106.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC-CCCCeEEEecC-------CCHHHHHHHHHHHHHH-h
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSIDG-------KTEDEVCRSLERVLLT-M 683 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~ 683 (944)
.+.+.+.++|++++++|++++++|||+...+..+...+++... ..+|..+...+ -..+.....++..... .
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 101 (274)
T 3fzq_A 22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREV 101 (274)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEECCCCHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEcCCCHHHHHHHHHHHHHCCc
Confidence 5788899999999999999999999999999998888876321 11122222221 1222222222221110 0
Q ss_pred hc----------------------------------------------cc-CCCCcEEEEEcchhHHHHHHHHHHHHHh-
Q 002275 684 RI----------------------------------------------TT-SEPKDVAFVVDGWALEIALKHYRKAFTE- 715 (944)
Q Consensus 684 ~~----------------------------------------------~~-~~~~~~~lv~~~~~~~~~~~~~~~~~~~- 715 (944)
.. .. .......+.+... ....+.+.+.+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~ 179 (274)
T 3fzq_A 102 AFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSN--EKVFDEVKDILQDK 179 (274)
T ss_dssp EEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEECC--HHHHHHHHHHHGGG
T ss_pred eEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEEcC--HHHHHHHHHHhhcc
Confidence 00 00 0001111122111 1122223333322
Q ss_pred hhhcccee--EEEEeChh--hHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeecc
Q 002275 716 LAILSRTA--ICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (944)
Q Consensus 716 ~~~~~~~~--v~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~ 787 (944)
+....... .+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| ||+.+++++.||+|+.+
T Consensus 180 ~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 258 (274)
T 3fzq_A 180 MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM-KNSHQQLKDIATSICED 258 (274)
T ss_dssp EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE-TTSCHHHHHHCSEEECC
T ss_pred eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe-cCccHHHHHhhhheeCC
Confidence 11111222 44567776 58877776655 357899999999999999999999999 99999999999999987
Q ss_pred ccc
Q 002275 788 FRF 790 (944)
Q Consensus 788 ~~~ 790 (944)
++.
T Consensus 259 ~~e 261 (274)
T 3fzq_A 259 IFD 261 (274)
T ss_dssp GGG
T ss_pred Cch
Confidence 654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.4e-11 Score=130.56 Aligned_cols=66 Identities=29% Similarity=0.454 Sum_probs=56.6
Q ss_pred EEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 724 ICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
.+.++.|. +|+..++.+.+. .+++++|||+.||++|++.||+|||| +|+.+++|+.||+|+.+++.
T Consensus 184 ~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 184 LFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp TEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTCSEECCCTTT
T ss_pred CeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHHhcCEeeCCCCc
Confidence 35677776 698888777653 46899999999999999999999999 99999999999999987654
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2e-11 Score=121.47 Aligned_cols=137 Identities=12% Similarity=0.093 Sum_probs=102.3
Q ss_pred eEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHH
Q 002275 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682 (944)
Q Consensus 603 ~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (944)
..++.+.++|.. +|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred hhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh----cCCeEEEecCCccchh
Q 002275 683 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVR 758 (944)
Q Consensus 683 ~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ 758 (944)
++.. ...|...++.+.+ ..+.++++||+.||++
T Consensus 88 -----------------------------------------~f~~--~~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~ 124 (189)
T 3mn1_A 88 -----------------------------------------LFQG--REDKLVVLDKLLAELQLGYEQVAYLGDDLPDLP 124 (189)
T ss_dssp -----------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------HhcC--cCChHHHHHHHHHHcCCChhHEEEECCCHHHHH
Confidence 1111 1556666655544 3578999999999999
Q ss_pred hhhhcCeeEEecccchHHHhhhCcEeeccccc---hhHH--HhhhhhhhhhhhhhhHHhhhhHH
Q 002275 759 MIQKADIGVGISGREGLQAARAADYSIGKFRF---LKRL--ILVHGRYSYNRTAFLSQYSFYKS 817 (944)
Q Consensus 759 ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~---l~~l--~l~~gr~~~~~~~~~~~~~~~~~ 817 (944)
|++.||+|++| +++.+.+++.||+++.+.+. +..+ .+...|..+.++++.+.|.+..|
T Consensus 125 ~~~~ag~~~~~-~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 125 VIRRVGLGMAV-ANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp HHHHSSEEEEC-TTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC---
T ss_pred HHHHCCCeEEe-CCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcccccc
Confidence 99999999999 88888888899999987532 2222 24567788888887777765443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=5.8e-11 Score=126.62 Aligned_cols=178 Identities=18% Similarity=0.212 Sum_probs=108.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC-----CCCCeEEEe--cCC-------CHHHHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-----EPKGQLLSI--DGK-------TEDEVCRSLE 677 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~-----~~~~~~~~~--~~~-------~~~~~~~~~~ 677 (944)
..+.++++++|++++++|++++++|||+...+..+.+++++..+ ..+|..+.. ++. ..+.....++
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 100 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 100 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 46788999999999999999999999999999999999987532 112333322 222 1122222121
Q ss_pred HHHHH-hhc--ccC-----------------------------------CCCcEEEE-Ec-chhHHHHHHHHHHHHH-hh
Q 002275 678 RVLLT-MRI--TTS-----------------------------------EPKDVAFV-VD-GWALEIALKHYRKAFT-EL 716 (944)
Q Consensus 678 ~~~~~-~~~--~~~-----------------------------------~~~~~~lv-~~-~~~~~~~~~~~~~~~~-~~ 716 (944)
..... ... ... ......+. .. ........+.+.+.+. .+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 180 (282)
T 1rkq_A 101 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 180 (282)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCE
Confidence 11110 000 000 00000111 11 1112222222212221 22
Q ss_pred hhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 717 AILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 717 ~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
....+...+.++.|. +|+..++.+.+. .+.+++|||+.||++|++.|++|||| +|+.+++++.||+++.+++.
T Consensus 181 ~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 181 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCTTT
T ss_pred EEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe-cCCcHHHHhhCCEEecCCCc
Confidence 222233346788887 699888877653 46899999999999999999999999 89888899999999976543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.18 E-value=4.6e-11 Score=123.88 Aligned_cols=166 Identities=12% Similarity=0.122 Sum_probs=98.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCC------HHH--HHHH-HHHHHHHh
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT------EDE--VCRS-LERVLLTM 683 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~------~~~--~~~~-~~~~~~~~ 683 (944)
.+.+.++++|++|+++| +++++|||+...+..+...+ ..--..+|..+..+|.. ... +... ........
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57789999999999999 99999999999988887654 10001223344334433 111 1111 11111111
Q ss_pred hcccC---CCCcEEEEEcch---h-HHHHHHHHHHHH---HhhhhccceeEEEEeChh--hHHHHHHHHhhcCCeEEEec
Q 002275 684 RITTS---EPKDVAFVVDGW---A-LEIALKHYRKAF---TELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIG 751 (944)
Q Consensus 684 ~~~~~---~~~~~~lv~~~~---~-~~~~~~~~~~~~---~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~~~~v~~iG 751 (944)
..... ......+..... . .....+...+.+ ..+. ..+...+.++.|. +|+..++.+.+.-. |++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~G 178 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVE-TYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAG 178 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCE-EEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEE
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcE-EEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEe
Confidence 00000 000011111000 0 011122222211 2222 2233456788887 69999999988644 99999
Q ss_pred CCccchhhhhhc--CeeEEecccchHHHhhhCcEeecc
Q 002275 752 DGGNDVRMIQKA--DIGVGISGREGLQAARAADYSIGK 787 (944)
Q Consensus 752 Dg~ND~~ml~~A--~vgIam~gn~~~~~k~~Ad~v~~~ 787 (944)
|+.||++||+.| ++|||| ||+ ++.||+++.+
T Consensus 179 D~~ND~~Ml~~a~~g~~vam-~Na----~~~A~~v~~~ 211 (239)
T 1u02_A 179 DDATDEAAFEANDDALTIKV-GEG----ETHAKFHVAD 211 (239)
T ss_dssp SSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESS
T ss_pred CCCccHHHHHHhhCCcEEEE-CCC----CCcceEEeCC
Confidence 999999999999 999999 887 5789999977
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.15 E-value=9.2e-11 Score=124.33 Aligned_cols=177 Identities=17% Similarity=0.206 Sum_probs=104.2
Q ss_pred ccCCCh-HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecC-------CCHHHHHHHHHHHHHH
Q 002275 613 RLQDGV-PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG-------KTEDEVCRSLERVLLT 682 (944)
Q Consensus 613 ~lr~~~-~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 682 (944)
.+.+.+ +++|++|+++|++++++|||+...+..+..++++..+ ..+|..+..++ -+.+.....++.....
T Consensus 20 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 99 (271)
T 1rlm_A 20 TYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKD 99 (271)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEEEecCCHHHHHHHHHHHHhC
Confidence 466674 8999999999999999999999988877766653211 01222222111 1222222222211110
Q ss_pred hhc------------------------cc--------C-----CCCcEEEEE--cchhHHHHHHHHHHHHHh-hhhccce
Q 002275 683 MRI------------------------TT--------S-----EPKDVAFVV--DGWALEIALKHYRKAFTE-LAILSRT 722 (944)
Q Consensus 683 ~~~------------------------~~--------~-----~~~~~~lv~--~~~~~~~~~~~~~~~~~~-~~~~~~~ 722 (944)
... .. . ......+.+ +........+.+.+.+.. +......
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 179 (271)
T 1rlm_A 100 KQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSG 179 (271)
T ss_dssp TTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECS
T ss_pred CCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEcCHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 000 00 0 001111111 222233333333322221 2222222
Q ss_pred eEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 723 AICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 723 ~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
..+.++.|. .|+..++.+.+. .+.+++|||+.||++|++.|++||+| +|+.+++++.||+|+.+++.
T Consensus 180 ~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 180 FGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDNNH 252 (271)
T ss_dssp TTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCGGG
T ss_pred CCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCccHHHHHhCCeeCcCCCC
Confidence 334577766 688888777653 46899999999999999999999999 89999999999999987544
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.5e-10 Score=124.33 Aligned_cols=178 Identities=15% Similarity=0.159 Sum_probs=108.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH--HHcC-CCC---C--CCCCeEEEe-cCC-------CHHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA--LSCN-FIS---P--EPKGQLLSI-DGK-------TEDEVCRS 675 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia--~~~g-i~~---~--~~~~~~~~~-~~~-------~~~~~~~~ 675 (944)
..+.++++++|++|+++|++++++|||+...+..+. ..++ +.. + ..+|..+.. ++. ..+.....
T Consensus 44 ~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i 123 (301)
T 2b30_A 44 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAEL 123 (301)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeCCCCEEEEccCCHHHHHHH
Confidence 467888999999999999999999999999999998 8877 641 1 112223322 222 22222222
Q ss_pred HHHHHH-Hh-h--cc-cC-------C--C-------------------------CcEEEEE--cchhHHHHHHHHHHHHH
Q 002275 676 LERVLL-TM-R--IT-TS-------E--P-------------------------KDVAFVV--DGWALEIALKHYRKAFT 714 (944)
Q Consensus 676 ~~~~~~-~~-~--~~-~~-------~--~-------------------------~~~~lv~--~~~~~~~~~~~~~~~~~ 714 (944)
+..... .. . .. .. . . ....+.+ +........+.+.+.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~~ 203 (301)
T 2b30_A 124 ISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFK 203 (301)
T ss_dssp HHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHST
T ss_pred HHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEEEECCHHHHHHHHHHHHHHhc
Confidence 222111 01 0 00 00 0 0 0000001 11112222222222221
Q ss_pred -hhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeec-
Q 002275 715 -ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG- 786 (944)
Q Consensus 715 -~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~- 786 (944)
.+....+...+.++.|. +|+..++.+.+. .+.+++|||+.||++|++.|++|||| +|+.+.+++.||+++.
T Consensus 204 ~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~ 282 (301)
T 2b30_A 204 NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPV 282 (301)
T ss_dssp TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE-cCCcHHHHhhCCEEEcc
Confidence 12222223345788887 699988887653 35799999999999999999999999 8998889999999998
Q ss_pred cccc
Q 002275 787 KFRF 790 (944)
Q Consensus 787 ~~~~ 790 (944)
+++.
T Consensus 283 ~~~~ 286 (301)
T 2b30_A 283 SHRE 286 (301)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 6544
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.13 E-value=7e-11 Score=114.25 Aligned_cols=109 Identities=17% Similarity=0.123 Sum_probs=86.3
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH--HcCCCCCCCCCeEEEecCCCHHHHHHHHHH
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTEDEVCRSLER 678 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (944)
+...++.+.++|.. +|+.|+++|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777777773 899999999999999999 67777888 45541
Q ss_pred HHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc----CCeEEEecCCc
Q 002275 679 VLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC----DYRTLAIGDGG 754 (944)
Q Consensus 679 ~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~----~~~v~~iGDg~ 754 (944)
++ ..+++|...++.+.+. .+++++|||+.
T Consensus 77 ---------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~ 109 (168)
T 3ewi_A 77 ---------------------------------------------TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNEV 109 (168)
T ss_dssp ---------------------------------------------EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred ---------------------------------------------EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCCH
Confidence 11 1234677766665543 56899999999
Q ss_pred cchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 755 ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
||++|++.|+++++| +|+.+.+++.||+|+.++..
T Consensus 110 nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~~~~ 144 (168)
T 3ewi_A 110 SDEECLKRVGLSAVP-ADACSGAQKAVGYICKCSGG 144 (168)
T ss_dssp GGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSSCTT
T ss_pred hHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCCCCC
Confidence 999999999999999 89999999999999986543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=121.78 Aligned_cols=176 Identities=11% Similarity=0.144 Sum_probs=105.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC-C--CCCCeEEEe-cC-------CCHHHHHHHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSI-DG-------KTEDEVCRSLERVL 680 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~-~--~~~~~~~~~-~~-------~~~~~~~~~~~~~~ 680 (944)
..+.+.++++|++ +++|++++++|||+...+..+...+|+.. + ..+|..+.. ++ -..+.....+.. .
T Consensus 18 ~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~-~ 95 (268)
T 1nf2_A 18 LEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEY-I 95 (268)
T ss_dssp SCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHHHH-H
T ss_pred CccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEEecCCCHHHHHHHHHH-H
Confidence 3577889999999 99999999999999999999999998743 2 112222222 22 122222221111 1
Q ss_pred HHhhc----ccC------------------------------------CCCcEEEEEcchhHHHHHHHHHHHHH-hhhhc
Q 002275 681 LTMRI----TTS------------------------------------EPKDVAFVVDGWALEIALKHYRKAFT-ELAIL 719 (944)
Q Consensus 681 ~~~~~----~~~------------------------------------~~~~~~lv~~~~~~~~~~~~~~~~~~-~~~~~ 719 (944)
..... ... ...+..+..+........+.+.+.+. .+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (268)
T 1nf2_A 96 KPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVF 175 (268)
T ss_dssp GGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred HhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEE
Confidence 11000 000 00001111011111112222222221 12222
Q ss_pred cceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 720 SRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 720 ~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
.+...+.++.|. +|+..++.+.+. .+.+++|||+.||++|++.||+||+| +|+.+++++.||+++.+++.
T Consensus 176 ~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~ 251 (268)
T 1nf2_A 176 KSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTNND 251 (268)
T ss_dssp EEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCTTT
T ss_pred EecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCHHHHhhCCEEEccCCc
Confidence 223335688887 699888877653 46799999999999999999999999 89988899999999976543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=116.22 Aligned_cols=98 Identities=19% Similarity=0.131 Sum_probs=79.9
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcc
Q 002275 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (944)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~ 699 (944)
.+|+.|+++|++++++||++...+..+++++|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 34999999999999999999999999999999731
Q ss_pred hhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCeeEEecccchH
Q 002275 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (944)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (944)
++... +.|...++.+.+ ..+++++|||+.||++|++.||++++| +|+.+
T Consensus 94 ------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~~ 146 (195)
T 3n07_A 94 ------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGHP 146 (195)
T ss_dssp ------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCH
T ss_pred ------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChHH
Confidence 11111 345555544433 457899999999999999999999999 89988
Q ss_pred HHhhhCcEeecccc
Q 002275 776 QAARAADYSIGKFR 789 (944)
Q Consensus 776 ~~k~~Ad~v~~~~~ 789 (944)
.+++.||+|+.++.
T Consensus 147 ~~~~~ad~v~~~~~ 160 (195)
T 3n07_A 147 LLAQRANYVTHIKG 160 (195)
T ss_dssp HHHHHCSEECSSCT
T ss_pred HHHHhCCEEEcCCC
Confidence 89999999998654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-10 Score=112.46 Aligned_cols=125 Identities=12% Similarity=0.034 Sum_probs=91.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcE
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (944)
+.+++.++|+.|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456789999999999999999999999999999998731
Q ss_pred EEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 694 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
++. ....|...++.+.+ ..+.++++||+.||++|++.||++++|
T Consensus 77 ------------------------------~~~--~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 124 (180)
T 1k1e_A 77 ------------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV 124 (180)
T ss_dssp ------------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ------------------------------eec--CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe
Confidence 111 12345555554433 347899999999999999999999999
Q ss_pred cccchHHHhhhCcEeeccccchh---HHH--hhhhhhhhhhhhhhH
Q 002275 770 SGREGLQAARAADYSIGKFRFLK---RLI--LVHGRYSYNRTAFLS 810 (944)
Q Consensus 770 ~gn~~~~~k~~Ad~v~~~~~~l~---~l~--l~~gr~~~~~~~~~~ 810 (944)
+++.+.+++.||+++.+.+... .++ +...|..++++...+
T Consensus 125 -~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~ 169 (180)
T 1k1e_A 125 -ADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTAQ 169 (180)
T ss_dssp -TTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHHCHH
T ss_pred -CCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhhhcc
Confidence 7888888889999998764322 111 233455566654433
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=120.47 Aligned_cols=170 Identities=15% Similarity=0.238 Sum_probs=103.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCH-------HHHHHH---------HHHH
Q 002275 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE-------DEVCRS---------LERV 679 (944)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~-------~~~~~~---------~~~~ 679 (944)
+.+.++|++++ +|++++++|||+...+..+.+++++..+. .++..+|..+ ...... ....
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~---~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPD---YWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAI 97 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCS---EEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCC---EEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHH
Confidence 45677888865 68999999999999999999998764321 1333333221 111111 1111
Q ss_pred HHHhhcc------cCCCCcEEEEEcchhHHHHHHHHHHHHHh----hhhccceeEEEEeChh--hHHHHHHHHhhc----
Q 002275 680 LLTMRIT------TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC---- 743 (944)
Q Consensus 680 ~~~~~~~------~~~~~~~~lv~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~p~--~K~~iv~~l~~~---- 743 (944)
....... .....+..+...........+.+.+.+.. +....+...+.++.|. +|+..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~ 177 (244)
T 1s2o_A 98 ADGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAME 177 (244)
T ss_dssp HHTCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCC
T ss_pred HHhccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCC
Confidence 1111100 01122333333333222233333333322 2222223346788887 699888887763
Q ss_pred CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhh-------CcEeeccccc
Q 002275 744 DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA-------ADYSIGKFRF 790 (944)
Q Consensus 744 ~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~-------Ad~v~~~~~~ 790 (944)
.+.+++|||+.||++|++.|++||+| +|+.+++++. ||+++.+++.
T Consensus 178 ~~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 178 PSQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp GGGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCCTTEEECSSCHH
T ss_pred HHHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHHHHhcccccceeecCCcch
Confidence 36799999999999999999999999 8999999885 8999976544
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.3e-10 Score=119.48 Aligned_cols=177 Identities=14% Similarity=0.100 Sum_probs=103.1
Q ss_pred cceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEec-------------
Q 002275 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID------------- 665 (944)
Q Consensus 601 ~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~------------- 665 (944)
|.|++ .+...+.++++|++|+++|++++++|||+...+..+...+|+..+ ..+|..+...
T Consensus 10 DGTLl-----~~~~~~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~ 84 (249)
T 2zos_A 10 DKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEV 84 (249)
T ss_dssp STTTC-----TTSCSGGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CC
T ss_pred CCCcc-----CCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCccccccccccc
Confidence 55555 333334599999999999999999999999999999998886432 1122233221
Q ss_pred --------CCCHHHHHHHHHHHHHH-----hh------------cccC-------CCCcEEEEEcchhHHHHHHHHHHHH
Q 002275 666 --------GKTEDEVCRSLERVLLT-----MR------------ITTS-------EPKDVAFVVDGWALEIALKHYRKAF 713 (944)
Q Consensus 666 --------~~~~~~~~~~~~~~~~~-----~~------------~~~~-------~~~~~~lv~~~~~~~~~~~~~~~~~ 713 (944)
....+.....+...... .. .... ......++..+.... .+.+.+
T Consensus 85 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~-- 160 (249)
T 2zos_A 85 GNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGW--EEVLVE-- 160 (249)
T ss_dssp CCCCEEECSCCHHHHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCH--HHHHHH--
T ss_pred CceEEEecCCCHHHHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHH--HHHHHh--
Confidence 11222222222211110 00 0000 000111222222111 111111
Q ss_pred HhhhhccceeEEEEeCh-hhHHHHHHHHhhc-----CCeEEEecCCccchhhhhhcCeeEEecccch-HHHhhhCcEeec
Q 002275 714 TELAILSRTAICCRVTP-SQKAQLVELLKSC-----DYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQAARAADYSIG 786 (944)
Q Consensus 714 ~~~~~~~~~~v~~~~~p-~~K~~iv~~l~~~-----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~-~~~k~~Ad~v~~ 786 (944)
..+....+ ..+.++.| .+|+..++.+.+. .+.|++|||+.||++||+.|++|||| ||+. +++++.||+++.
T Consensus 161 ~~~~~~~s-~~~~ei~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 161 GGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDV 238 (249)
T ss_dssp TTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTEEEESSHHHH
T ss_pred CCEEEEec-CCeEEEeCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCccccchhceEEec
Confidence 11211111 22467777 2398888777643 46799999999999999999999999 8887 668888998886
Q ss_pred cc
Q 002275 787 KF 788 (944)
Q Consensus 787 ~~ 788 (944)
+.
T Consensus 239 ~~ 240 (249)
T 2zos_A 239 LE 240 (249)
T ss_dssp HH
T ss_pred cc
Confidence 53
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.05 E-value=9.9e-10 Score=117.46 Aligned_cols=68 Identities=24% Similarity=0.183 Sum_probs=57.2
Q ss_pred eeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 722 TAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 722 ~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
...+.++.|. +|+..++.+.+. .+.+++|||+.||++|++.||+|||| +|+.+++++.||+++.+++.
T Consensus 204 ~~~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 204 AEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTNDE 277 (288)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCGGG
T ss_pred CCCcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecCCCc
Confidence 3346788887 598888877653 46899999999999999999999999 89989999999999976544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.00 E-value=9.7e-10 Score=113.30 Aligned_cols=177 Identities=16% Similarity=0.183 Sum_probs=105.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecCC-----CHHHHHHHHHHHHHHh
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK-----TEDEVCRSLERVLLTM 683 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 683 (944)
...+.+.+.+++++++++|++++++|||+...+..+...+|+..+ ..+|..+..++. ..+.....++......
T Consensus 18 ~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~ 97 (231)
T 1wr8_A 18 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRF 97 (231)
T ss_dssp TSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhC
Confidence 346778899999999999999999999999999999998886432 011212211111 1122222222221011
Q ss_pred -hcccC-----CCCcEEEEEcchhHHHHHHHHHHHHH-hhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEe
Q 002275 684 -RITTS-----EPKDVAFVVDGWALEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAI 750 (944)
Q Consensus 684 -~~~~~-----~~~~~~lv~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~i 750 (944)
..... ...... +.+........+...+.+. .+... ....+.++.|. .|...++.+.+. .+.+++|
T Consensus 98 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~i 175 (231)
T 1wr8_A 98 PNARTSYTMPDRRAGLV-IMRETINVETVREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV 175 (231)
T ss_dssp TTCCBCTTGGGCSSCEE-ECTTTSCHHHHHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEE
T ss_pred CCceEEecCCCceeeEE-EECCCCCHHHHHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEE
Confidence 10000 001112 2220111112222222221 11111 12234566665 588877776543 4679999
Q ss_pred cCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 751 GDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
||+.||++|++.||+|++| +|+.+++++.||+++.+.+.
T Consensus 176 GD~~nD~~~~~~ag~~v~~-~~~~~~~~~~a~~v~~~~~e 214 (231)
T 1wr8_A 176 GDGENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKEYG 214 (231)
T ss_dssp ECSGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSCHH
T ss_pred CCCHHHHHHHHHcCCeEEe-cCCCHHHHhhCCEEecCCCc
Confidence 9999999999999999999 88888888899999986543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.1e-10 Score=112.30 Aligned_cols=108 Identities=17% Similarity=0.109 Sum_probs=86.0
Q ss_pred EeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHh
Q 002275 604 VLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 683 (944)
Q Consensus 604 ~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (944)
.+..+.+.|.+ +|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34445555554 9999999999999999999999999999999831
Q ss_pred hcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh----cCCeEEEecCCccchhh
Q 002275 684 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRM 759 (944)
Q Consensus 684 ~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~m 759 (944)
++..+ +.|..+++.+.+ ..++++++||+.||++|
T Consensus 118 ----------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~ 155 (211)
T 3ij5_A 118 ----------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV 155 (211)
T ss_dssp ----------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred ----------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH
Confidence 11111 456666655544 36789999999999999
Q ss_pred hhhcCeeEEecccchHHHhhhCcEeecccc
Q 002275 760 IQKADIGVGISGREGLQAARAADYSIGKFR 789 (944)
Q Consensus 760 l~~A~vgIam~gn~~~~~k~~Ad~v~~~~~ 789 (944)
++.||++++| +++.+.++..||+|+.+..
T Consensus 156 ~~~ag~~~a~-~~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 156 MAQVGLSVAV-ADAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HTTSSEEEEC-TTSCTTTGGGSSEECSSCT
T ss_pred HHHCCCEEEe-CCccHHHHhhCCEEEeCCC
Confidence 9999999999 8888888889999998753
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=119.80 Aligned_cols=149 Identities=19% Similarity=0.208 Sum_probs=95.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++||+....+..+++.+|+...-.. .+...++.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~-~l~~~d~~------------------------- 231 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN-TLEIVSGK------------------------- 231 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE-EEEEETTE-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee-eeEeeCCe-------------------------
Confidence 6899999999999999999999999999999999999998421100 00000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEE-eChhhHHHHHH----HHhhcCCeEEEecCCccchhhhhhcCeeE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVE----LLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~p~~K~~iv~----~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
++ ..+..+ ..++.|..+++ .++...+++++||||.||++|++.||+|+
T Consensus 232 ----~t-----------------------g~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~v 284 (335)
T 3n28_A 232 ----LT-----------------------GQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGV 284 (335)
T ss_dssp ----EE-----------------------EEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ----ee-----------------------eeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 00 000001 12234555444 44444678999999999999999999999
Q ss_pred EecccchHHHhhhCcEeeccccchhHH-HhhhhhhhhhhhhhhHHhhhhH
Q 002275 768 GISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYK 816 (944)
Q Consensus 768 am~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~ 816 (944)
+| ++.+.+++.||+++...+.-..+ .+......-.|+++++.|.+.+
T Consensus 285 a~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~ 332 (335)
T 3n28_A 285 AY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSKEGHHH 332 (335)
T ss_dssp EE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC-------
T ss_pred Ee--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhcccccccccc
Confidence 99 66777888999999655553333 2233333344666665555443
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.97 E-value=2.8e-09 Score=112.96 Aligned_cols=175 Identities=15% Similarity=0.210 Sum_probs=93.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC-C--CCCCeEEEecC--C------------CHHHHHH
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG--K------------TEDEVCR 674 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~-~--~~~~~~~~~~~--~------------~~~~~~~ 674 (944)
+.+.+.++++|++|+++|++++++|||+...+..+...+++.. + ..+|..+..++ . +.+....
T Consensus 25 ~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~ 104 (275)
T 1xvi_A 25 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISL 104 (275)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHH
Confidence 4566889999999999999999999999999999999998753 2 22333443221 1 1111221
Q ss_pred HHHHHHHHh--hcc------------------------cCCCCcEEEEEcchhHHHHHHHHHHHHHh--hhhccceeEEE
Q 002275 675 SLERVLLTM--RIT------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE--LAILSRTAICC 726 (944)
Q Consensus 675 ~~~~~~~~~--~~~------------------------~~~~~~~~lv~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~ 726 (944)
.+....... ... ........+...... ...+.+.+.+.. +.... ...+.
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~-~~~~l 181 (275)
T 1xvi_A 105 VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSD--ERMAQFTARLNELGLQFMQ-GARFW 181 (275)
T ss_dssp HHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCH--HHHHHHHHHHHHTTEEEEE-CSSCE
T ss_pred HHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCH--HHHHHHHHHHHhhCeEEEE-CCceE
Confidence 111111100 000 000111122332211 111122222221 21122 23357
Q ss_pred EeChh--hHHHHHHHHhh-----cCCe--EEEecCCccchhhhhhcCeeEEecccch---HHHhhh--Cc-Eeeccccc
Q 002275 727 RVTPS--QKAQLVELLKS-----CDYR--TLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--AD-YSIGKFRF 790 (944)
Q Consensus 727 ~~~p~--~K~~iv~~l~~-----~~~~--v~~iGDg~ND~~ml~~A~vgIam~gn~~---~~~k~~--Ad-~v~~~~~~ 790 (944)
++.|. +|+..++.+.+ ..+. +++|||+.||++|++.|++|||| +|+. +++++. || +++.+++.
T Consensus 182 eI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~~~~~~a~~~v~~~~~~ 259 (275)
T 1xvi_A 182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV-KGLNREGVHLHDEDPARVWRTQREGP 259 (275)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC-CCCC----------------------
T ss_pred EEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe-cCCCccchhhccccCCceeEccCCCc
Confidence 88887 59887766653 3456 99999999999999999999999 8886 556553 78 88865443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=106.58 Aligned_cols=96 Identities=17% Similarity=0.134 Sum_probs=79.8
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcch
Q 002275 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (944)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 700 (944)
+|+.|+++|+++.++||++...+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999872
Q ss_pred hHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCeeEEecccchHH
Q 002275 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (944)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (944)
++.. .+.|...++.+.+ ..+.++++||+.||++|++.|+++++| +++.+.
T Consensus 80 -----------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~ 133 (176)
T 3mmz_A 80 -----------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDV 133 (176)
T ss_dssp -----------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHH
T ss_pred -----------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHH
Confidence 1111 2456665555544 357899999999999999999999999 888888
Q ss_pred HhhhCcEeecccc
Q 002275 777 AARAADYSIGKFR 789 (944)
Q Consensus 777 ~k~~Ad~v~~~~~ 789 (944)
+++.||+++.+++
T Consensus 134 ~~~~ad~v~~~~~ 146 (176)
T 3mmz_A 134 VRGAARAVTTVPG 146 (176)
T ss_dssp HHHHSSEECSSCT
T ss_pred HHHhCCEEecCCC
Confidence 8889999998744
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.1e-09 Score=109.08 Aligned_cols=99 Identities=20% Similarity=0.162 Sum_probs=80.5
Q ss_pred HHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcchh
Q 002275 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (944)
Q Consensus 622 I~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~ 701 (944)
|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999998732
Q ss_pred HHHHHHHHHHHHHhhhhccceeEEEEe--ChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhh
Q 002275 702 LEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (944)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~ 779 (944)
++..+ .|.-...+++.++...+.++++||+.||++|++.||++++| +++.+.++.
T Consensus 88 ----------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~ 144 (191)
T 3n1u_A 88 ----------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNAVPQVLE 144 (191)
T ss_dssp ----------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHH
T ss_pred ----------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCccHHHHH
Confidence 11111 23334455566655677899999999999999999999999 888888889
Q ss_pred hCcEeeccccc
Q 002275 780 AADYSIGKFRF 790 (944)
Q Consensus 780 ~Ad~v~~~~~~ 790 (944)
.||+++.+...
T Consensus 145 ~ad~v~~~~~~ 155 (191)
T 3n1u_A 145 FADWRTERTGG 155 (191)
T ss_dssp HSSEECSSCTT
T ss_pred hCCEEecCCCC
Confidence 99999987543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.2e-09 Score=112.98 Aligned_cols=65 Identities=31% Similarity=0.462 Sum_probs=54.0
Q ss_pred EEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 725 CCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 725 ~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+.++.|. .|...++.+.+. .+.+++|||+.||++|++.||+|++| +|+.++++..||+++.+.+.
T Consensus 178 ~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 178 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGG
T ss_pred eEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCch
Confidence 3466665 588777766543 46899999999999999999999999 89988898899999987665
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=6.8e-09 Score=109.02 Aligned_cols=60 Identities=18% Similarity=0.253 Sum_probs=49.7
Q ss_pred EeChh-hHHHHHHHHhhc----C--CeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 727 RVTPS-QKAQLVELLKSC----D--YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 727 ~~~p~-~K~~iv~~l~~~----~--~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
++.|. +|+..++.+.+. . +.+++|||+.||++|++.|++|||| +|+.+ + .|++++.++..
T Consensus 170 ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~-~--~~~~~~~~~~~ 236 (259)
T 3zx4_A 170 HAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV-GRGDP-P--EGVLATPAPGP 236 (259)
T ss_dssp EEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC-SSSCC-C--TTCEECSSCHH
T ss_pred EEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe-CChhh-c--CCcEEeCCCCc
Confidence 55554 789888887764 3 7899999999999999999999999 89887 4 67899876544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2.4e-09 Score=112.58 Aligned_cols=65 Identities=18% Similarity=0.248 Sum_probs=54.8
Q ss_pred EEEEeChh--hHHHHHHHH-hhcCCeEEEecC----CccchhhhhhcC-eeEEecccchHHHhhhCcEeecccc
Q 002275 724 ICCRVTPS--QKAQLVELL-KSCDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYSIGKFR 789 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l-~~~~~~v~~iGD----g~ND~~ml~~A~-vgIam~gn~~~~~k~~Ad~v~~~~~ 789 (944)
.+.++.|. +|+..++.| +...+.|++||| +.||++||+.|+ +|++| +|+.+.+++.||+|+.+++
T Consensus 187 ~~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 187 ISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp SCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTTC-
T ss_pred cEEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCCCc
Confidence 35788887 599999988 112578999999 999999999999 59999 9999999999999987643
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.2e-08 Score=102.97 Aligned_cols=121 Identities=23% Similarity=0.271 Sum_probs=83.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.++++++++.++++|++++++||+....+......+|+...-.. .....
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------------- 126 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVK-------------------------- 126 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe--eeEEE--------------------------
Confidence 45778999999999999999999999998888888877776211000 00000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC-hhhHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCee
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT-PSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
++ ........+.. +..|...++.+.+ ..+++++|||+.||++|++.||++
T Consensus 127 ------~~-------------------~~~~~~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~ 181 (211)
T 1l7m_A 127 ------DG-------------------KLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLK 181 (211)
T ss_dssp ------TT-------------------EEEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE
T ss_pred ------CC-------------------EEcCCcccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCE
Confidence 00 00000111112 3467666555443 346799999999999999999999
Q ss_pred EEecccchHHHhhhCcEeecc
Q 002275 767 VGISGREGLQAARAADYSIGK 787 (944)
Q Consensus 767 Iam~gn~~~~~k~~Ad~v~~~ 787 (944)
++| + +.+.++..||+++.+
T Consensus 182 ~~~-~-~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 182 IAF-C-AKPILKEKADICIEK 200 (211)
T ss_dssp EEE-S-CCHHHHTTCSEEECS
T ss_pred EEE-C-CCHHHHhhcceeecc
Confidence 999 5 556677889999987
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=8e-09 Score=100.11 Aligned_cols=97 Identities=20% Similarity=0.095 Sum_probs=78.5
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcch
Q 002275 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (944)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 700 (944)
+++.|+++|++++++||++...+..+++.+|+...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~--------------------------------------------- 73 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL--------------------------------------------- 73 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE---------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe---------------------------------------------
Confidence 89999999999999999999999999999987321
Q ss_pred hHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHH----HHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHH
Q 002275 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL----VELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (944)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i----v~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (944)
+... +.|... ++.++...+.++++||+.||++|++.||+++++ +++.+.
T Consensus 74 ------------------------~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~ 126 (164)
T 3e8m_A 74 ------------------------FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP-ASAPFY 126 (164)
T ss_dssp ------------------------ECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC-TTSCHH
T ss_pred ------------------------eccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc-CChHHH
Confidence 1111 334443 344443457899999999999999999999999 888888
Q ss_pred HhhhCcEeecccc
Q 002275 777 AARAADYSIGKFR 789 (944)
Q Consensus 777 ~k~~Ad~v~~~~~ 789 (944)
+++.||+++.+.+
T Consensus 127 ~~~~ad~v~~~~~ 139 (164)
T 3e8m_A 127 IRRLSTIFLEKRG 139 (164)
T ss_dssp HHTTCSSCCCCCT
T ss_pred HHHhCcEEeccCC
Confidence 8899999998755
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.79 E-value=4.7e-09 Score=109.29 Aligned_cols=61 Identities=18% Similarity=0.177 Sum_probs=50.3
Q ss_pred EEEEeChh--hHHHHHHHH-hhcCCeEEEecC----CccchhhhhhcCe-eEEecccchHHHhhhCcEee
Q 002275 724 ICCRVTPS--QKAQLVELL-KSCDYRTLAIGD----GGNDVRMIQKADI-GVGISGREGLQAARAADYSI 785 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l-~~~~~~v~~iGD----g~ND~~ml~~A~v-gIam~gn~~~~~k~~Ad~v~ 785 (944)
.+.++.|. +|+..++.+ +...++|++||| |.||++||+.|+. |++| +|+.+++|+.||+|.
T Consensus 178 ~~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av-~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 178 ISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAPEDTRRICELLFS 246 (246)
T ss_dssp TEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSHHHHHHHHHHHCC
T ss_pred cEEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe-eCCCHHHHHHHhhcC
Confidence 35788887 599988888 113578999999 9999999999988 9999 999999999999873
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.9e-08 Score=102.25 Aligned_cols=133 Identities=17% Similarity=0.207 Sum_probs=90.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.|++.+.++.|+++|++++++|+.+...+....+.+|+...-.. ++...+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~------------------------ 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSN--TLIVEND------------------------ 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETT------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccc--eeEEeCC------------------------
Confidence 46889999999999999999999999999999999988887421100 0000000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEe-ChhhHHHHHHHHhh----cCCeEEEecCCccchhhhhhcCee
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
.....+...+ ..+.|..+++.+.+ ..+.+++|||+.||++|++.||++
T Consensus 128 ---------------------------~~~~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~ 180 (217)
T 3m1y_A 128 ---------------------------ALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIK 180 (217)
T ss_dssp ---------------------------EEEEEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEE
T ss_pred ---------------------------EEEeeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCe
Confidence 0000011111 23456665554443 357899999999999999999999
Q ss_pred EEecccchHHHhhhCcEeeccccchhHHHhhhh
Q 002275 767 VGISGREGLQAARAADYSIGKFRFLKRLILVHG 799 (944)
Q Consensus 767 Iam~gn~~~~~k~~Ad~v~~~~~~l~~l~l~~g 799 (944)
++| |+.+.+++.||+++.+++....+-+.+|
T Consensus 181 ~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 181 IAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp EEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred EEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 999 5677788999999988766443323444
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=6e-09 Score=108.11 Aligned_cols=62 Identities=21% Similarity=0.224 Sum_probs=51.2
Q ss_pred cceeEEEEeChh--hHHHHHHHHhhcCCeEEEecC----CccchhhhhhcC-eeEEecccchHHHhhhCc
Q 002275 720 SRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAAD 782 (944)
Q Consensus 720 ~~~~v~~~~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~A~-vgIam~gn~~~~~k~~Ad 782 (944)
.+...+.++.|. +|+..++.|.+..++|++||| |.||++||+.|+ +|++| +|+.+.++..++
T Consensus 173 ~sg~~~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v-~n~~~~~~~~~~ 241 (246)
T 3f9r_A 173 IGGQISFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV-TSYKDTIAEVEK 241 (246)
T ss_dssp EETTTEEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC-SSHHHHHHHHHH
T ss_pred ecCCeEEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEe-CCHHHHHHHHHH
Confidence 344557889988 699999998886678999999 699999999996 89999 888777765443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-08 Score=102.23 Aligned_cols=117 Identities=24% Similarity=0.333 Sum_probs=88.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|++.|++++++|+.+...+..+ +.+|+... .. .+...++
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~-~~~~~~~-------------------------- 129 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN-RAIFEDG-------------------------- 129 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE-EEEEETT--------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee-eEEeeCC--------------------------
Confidence 7889999999999999999999999988877777 77776321 00 0000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
........|..|...++.+ ..+.+++|||+.||++|++.||+||+| ++
T Consensus 130 -----------------------------~~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~-~~ 177 (201)
T 4ap9_A 130 -----------------------------KFQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAV-GR 177 (201)
T ss_dssp -----------------------------EEEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEE-SS
T ss_pred -----------------------------ceECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEE-CC
Confidence 0011344567899999888 667899999999999999999999999 77
Q ss_pred chHHHhhhCcEeeccccchhHH
Q 002275 773 EGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 773 ~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+.. .||+++.+++.+..+
T Consensus 178 ~~~----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 178 EIP----GADLLVKDLKELVDF 195 (201)
T ss_dssp CCT----TCSEEESSHHHHHHH
T ss_pred CCc----cccEEEccHHHHHHH
Confidence 654 899999987765544
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=4.8e-08 Score=96.86 Aligned_cols=97 Identities=16% Similarity=0.093 Sum_probs=76.3
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcch
Q 002275 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (944)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 700 (944)
+|+.|+++|++++++||++...+..+++.+|+...
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~--------------------------------------------- 95 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL--------------------------------------------- 95 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE---------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee---------------------------------------------
Confidence 89999999999999999999999999999887311
Q ss_pred hHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHh----hcCCeEEEecCCccchhhhhhcCeeEEecccchHH
Q 002275 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (944)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (944)
+.. .+.|..+++.+. ...+.++++||+.||++|++.||+++++ +++.+.
T Consensus 96 ------------------------~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~~~ 148 (188)
T 2r8e_A 96 ------------------------YQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAHPL 148 (188)
T ss_dssp ------------------------ECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCTT
T ss_pred ------------------------ecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcCHH
Confidence 101 123444444333 2346899999999999999999999999 777777
Q ss_pred HhhhCcEeecccc
Q 002275 777 AARAADYSIGKFR 789 (944)
Q Consensus 777 ~k~~Ad~v~~~~~ 789 (944)
++..||+++.+..
T Consensus 149 ~~~~ad~v~~~~~ 161 (188)
T 2r8e_A 149 LIPRADYVTRIAG 161 (188)
T ss_dssp TGGGSSEECSSCT
T ss_pred HHhcCCEEEeCCC
Confidence 7788999998763
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=3.4e-08 Score=99.48 Aligned_cols=126 Identities=17% Similarity=0.139 Sum_probs=91.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++.|++++++|+.....+......+|+...-....++
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~----------------------------- 119 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL----------------------------- 119 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE-----------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE-----------------------------
Confidence 367799999999999999999999999999998898888874221000000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEEec
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGIS 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam~ 770 (944)
+. ......-.|.--..+++.++...+.+++|||+.||++|.+.||+ +|+|
T Consensus 120 ------~~----------------------~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v- 170 (205)
T 3m9l_A 120 ------GR----------------------DEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLV- 170 (205)
T ss_dssp ------CT----------------------TTSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEC-
T ss_pred ------eC----------------------CCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEE-
Confidence 00 00000001122234555555556789999999999999999999 9999
Q ss_pred ccchHHHhhhCcEeeccccchhHHH
Q 002275 771 GREGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 771 gn~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
+++....+..||+++.+.+.+...+
T Consensus 171 ~~~~~~~~~~ad~v~~~~~el~~~~ 195 (205)
T 3m9l_A 171 NLPDNPWPELTDWHARDCAQLRDLL 195 (205)
T ss_dssp SSSSCSCGGGCSEECSSHHHHHHHH
T ss_pred eCCCCcccccCCEEeCCHHHHHHHH
Confidence 8877777889999999888776654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.60 E-value=8.1e-08 Score=92.69 Aligned_cols=107 Identities=16% Similarity=0.083 Sum_probs=82.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcE
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (944)
+.+++.++|+.|+++|++++++||++...+..+.+.+|+...
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-------------------------------------- 78 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI-------------------------------------- 78 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE--------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh--------------------------------------
Confidence 456678999999999999999999999999999999887310
Q ss_pred EEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEe--ChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 694 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
+... .|.--..+++.++...+.++++||+.||++|.+.||+++++ .
T Consensus 79 -------------------------------~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~-~ 126 (162)
T 2p9j_A 79 -------------------------------YTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV-R 126 (162)
T ss_dssp -------------------------------EECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-T
T ss_pred -------------------------------ccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe-c
Confidence 1011 12222234455544567899999999999999999999998 6
Q ss_pred cchHHHhhhCcEeeccccc
Q 002275 772 REGLQAARAADYSIGKFRF 790 (944)
Q Consensus 772 n~~~~~k~~Ad~v~~~~~~ 790 (944)
++.+..++.||+++.+.+.
T Consensus 127 ~~~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 127 NAVEEVRKVAVYITQRNGG 145 (162)
T ss_dssp TSCHHHHHHCSEECSSCSS
T ss_pred CccHHHHhhCCEEecCCCC
Confidence 7777788899999987654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.59 E-value=1e-07 Score=96.68 Aligned_cols=132 Identities=19% Similarity=0.227 Sum_probs=88.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
.+.+++.+.++.|+++|++++++|+.....+....+.+|+.... +...
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~----~~~~---------------------------- 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN----IFAV---------------------------- 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG----EEEE----------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc----EEEe----------------------------
Confidence 37899999999999999999999999999999999998873210 0000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHH-hhcCCeEEEecCCccchhhhhh----cCeeE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQK----ADIGV 767 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l-~~~~~~v~~iGDg~ND~~ml~~----A~vgI 767 (944)
.++..... ...........|..+.+.+... +...+++++|||+.||++|++. +.+++
T Consensus 130 -~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~ 191 (219)
T 3kd3_A 130 -ETIWNSDG-----------------SFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAY 191 (219)
T ss_dssp -EEEECTTS-----------------BEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEE
T ss_pred -eeeecCCC-----------------ceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEec
Confidence 00000000 0000000111334555555443 5567899999999999999976 45556
Q ss_pred EecccchHHHhhhCcEeeccccchhHHH
Q 002275 768 GISGREGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 768 am~gn~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
+| +++.+..+..||+++.+.+.+..++
T Consensus 192 ~~-~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 192 ME-HIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp CS-SCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred cC-ccccHHHHhhcceeeCCHHHHHHhh
Confidence 66 6777777889999999877766543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.58 E-value=2.1e-07 Score=101.47 Aligned_cols=165 Identities=11% Similarity=0.121 Sum_probs=95.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEe-cC-C---CHHHHHHHHHHHHHHhhccc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI-DG-K---TEDEVCRSLERVLLTMRITT 687 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~ 687 (944)
++++++.++++.|++ |+.+.++||+....+......+++... +..- .. . ...+....+... .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~k~~~~~-~------ 169 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE-----LHGTEVDFDSIAVPEGLREELLSI-I------ 169 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE-----EEEEBCCGGGCCCCHHHHHHHHHH-H------
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh-----hcccccchhhhccccccceeEEec-C------
Confidence 568999999999999 999999999986666666776666311 1110 00 0 000110000000 0
Q ss_pred CCCCcEEEEEcchhHHHHH-HHHHHHHHhhhhccce-eEEEE--eC--hhhHHHHHHHHhhcC--CeEEEecCCccchhh
Q 002275 688 SEPKDVAFVVDGWALEIAL-KHYRKAFTELAILSRT-AICCR--VT--PSQKAQLVELLKSCD--YRTLAIGDGGNDVRM 759 (944)
Q Consensus 688 ~~~~~~~lv~~~~~~~~~~-~~~~~~~~~~~~~~~~-~v~~~--~~--p~~K~~iv~~l~~~~--~~v~~iGDg~ND~~m 759 (944)
...+.... +.+ +.+.++ ..... ..+.+ +. +.+|+..++.+.... +.|++||||.||++|
T Consensus 170 -----------~~~~~~~~~~~l-~~~~~~-~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~m 236 (332)
T 1y8a_A 170 -----------DVIASLSGEELF-RKLDEL-FSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKM 236 (332)
T ss_dssp -----------HHHHHCCHHHHH-HHHHHH-HHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHH
T ss_pred -----------HHHHhhhhHHHH-HHHHHH-HhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHH
Confidence 00000000 011 111111 11110 01111 33 347998888554322 349999999999999
Q ss_pred hhhc----CeeEEecccchHHHhhhCcEeeccccc--hhHH---Hhhhhhhhhhhh
Q 002275 760 IQKA----DIGVGISGREGLQAARAADYSIGKFRF--LKRL---ILVHGRYSYNRT 806 (944)
Q Consensus 760 l~~A----~vgIam~gn~~~~~k~~Ad~v~~~~~~--l~~l---~l~~gr~~~~~~ 806 (944)
++.| |+|||| |+.+++++.||+|+.+++. +... .+..||..+ ++
T Consensus 237 l~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~ 289 (332)
T 1y8a_A 237 FEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELFMERKERAF-EV 289 (332)
T ss_dssp HHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GG
T ss_pred HHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HH
Confidence 9999 999999 7788899999999976544 2222 246788766 44
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.58 E-value=2e-07 Score=104.93 Aligned_cols=121 Identities=23% Similarity=0.288 Sum_probs=89.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...-.+ .+...+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~-~l~~~d--------------------------- 307 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAAN-ELEIVD--------------------------- 307 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEE-CEEEET---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeee-eEEEeC---------------------------
Confidence 7999999999999999999999999999999999999998421100 000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEe-----ChhhHHHHHHHHhh----cCCeEEEecCCccchhhhhhc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-----TPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKA 763 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A 763 (944)
..+..++ .++.|..+++.+.+ ..+.++++||+.||++|++.|
T Consensus 308 -----------------------------g~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~a 358 (415)
T 3p96_A 308 -----------------------------GTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAA 358 (415)
T ss_dssp -----------------------------TEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred -----------------------------CEEEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHC
Confidence 1111111 24556666655543 346899999999999999999
Q ss_pred CeeEEecccchHHHhhhCcEeeccccchh
Q 002275 764 DIGVGISGREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 764 ~vgIam~gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
|+|+++ ++.+.+++.||+++.+.+.-.
T Consensus 359 G~~va~--~~~~~~~~~ad~~i~~~~l~~ 385 (415)
T 3p96_A 359 GLGIAF--NAKPALREVADASLSHPYLDT 385 (415)
T ss_dssp SEEEEE--SCCHHHHHHCSEEECSSCTTH
T ss_pred CCeEEE--CCCHHHHHhCCEEEccCCHHH
Confidence 999999 566778889999998765543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.53 E-value=2.4e-07 Score=94.35 Aligned_cols=118 Identities=11% Similarity=0.053 Sum_probs=85.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.+++.|++++++|+.+...+......+|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----------------------------------- 138 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----------------------------------- 138 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc-----------------------------------
Confidence 467899999999999999999999999888887877777632211
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC------hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
..+..+.. |.--..+++.++...+++++|||+.||++|++.||++
T Consensus 139 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~ 189 (226)
T 1te2_A 139 -----------------------------ALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 189 (226)
T ss_dssp -----------------------------EEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCE
Confidence 00111111 2223445556655567899999999999999999999
Q ss_pred EEec---ccchHHHhhhCcEeeccccchhHH
Q 002275 767 VGIS---GREGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 767 Iam~---gn~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
++|- +++.+..+..||+++.+.+.+..-
T Consensus 190 ~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 190 SIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred EEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 9882 233345677899999987775443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=1.4e-07 Score=96.35 Aligned_cols=119 Identities=20% Similarity=0.247 Sum_probs=87.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++.|++++++|+.....+....+.+|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 4678999999999999999999999999888888888888742211
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHH----HHHHHhhcCCeEEEecCCccchhhhhhcCe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~----iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (944)
..+..+..+ +.|.. +++.++...+++++|||+.||++|.+.||+
T Consensus 131 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 131 ------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNL 180 (226)
T ss_dssp ------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred ------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCC
Confidence 111222222 22443 444444455789999999999999999999
Q ss_pred ---eEEecccchHHH--hhhCcEeeccccchhHHH
Q 002275 766 ---GVGISGREGLQA--ARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 766 ---gIam~gn~~~~~--k~~Ad~v~~~~~~l~~l~ 795 (944)
+|+| |++..+. +..||+++.++..+..++
T Consensus 181 ~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 181 PSIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp CEEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred CEEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 7777 6644333 458999999988877664
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-07 Score=98.12 Aligned_cols=125 Identities=23% Similarity=0.217 Sum_probs=88.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-.. +
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~------------------------------ 150 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--I------------------------------ 150 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE--E------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee--E------------------------------
Confidence 46789999999999999999999999999888888888887432110 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe---eEE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI---GVG 768 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v---gIa 768 (944)
+.++. ... ..-.|.--..+++.++...+++++|||+.||++|++.||+ +|+
T Consensus 151 -----~~~~~-----------------~~~----~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 204 (237)
T 4ex6_A 151 -----AGDDS-----------------VER----GKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVS 204 (237)
T ss_dssp -----ECTTT-----------------SSS----CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred -----EeCCC-----------------CCC----CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 00000 000 0001222345566666667889999999999999999999 888
Q ss_pred ecccchHHHhh-hCcEeeccccchhHH
Q 002275 769 ISGREGLQAAR-AADYSIGKFRFLKRL 794 (944)
Q Consensus 769 m~gn~~~~~k~-~Ad~v~~~~~~l~~l 794 (944)
|..+..+++++ .||+++.+...+..+
T Consensus 205 ~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 205 YGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp SSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred cCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 83244466666 799999987777655
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.50 E-value=3.9e-07 Score=98.02 Aligned_cols=123 Identities=16% Similarity=0.228 Sum_probs=84.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|++++++||.....+..+++.+|+...-.. .+...+..
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~--~l~~~dg~------------------------ 232 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN--TVEIRDNV------------------------ 232 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--CEEEETTE------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE--EEEeeCCe------------------------
Confidence 4899999999999999999999999999999999999998421100 00000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEE-eChhhHHHHHHHHh----hcCCeEEEecCCccchhhhhhcCeeE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~p~~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
.+ ..+... ..++.|..+++.+. ...+.++++||+.||++|++.||+|+
T Consensus 233 ----~t-----------------------g~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~v 285 (317)
T 4eze_A 233 ----LT-----------------------DNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGI 285 (317)
T ss_dssp ----EE-----------------------EEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ----ee-----------------------eeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeE
Confidence 00 000000 12345555554443 33578999999999999999999999
Q ss_pred EecccchHHHhhhCcEeeccccc
Q 002275 768 GISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 768 am~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
++ + +.+.+++.||.++...+.
T Consensus 286 a~-~-~~~~~~~~a~~~i~~~~L 306 (317)
T 4eze_A 286 AW-K-AKPVVREKIHHQINYHGF 306 (317)
T ss_dssp EE-S-CCHHHHHHCCEEESSSCG
T ss_pred Ee-C-CCHHHHHhcCeeeCCCCH
Confidence 99 3 556677889998864333
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.7e-07 Score=94.78 Aligned_cols=118 Identities=18% Similarity=0.134 Sum_probs=78.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|++.|+++.++|+.+. +......+|+...-.. +
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~--i------------------------------- 136 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA--I------------------------------- 136 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE--E-------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE--E-------------------------------
Confidence 4789999999999999999999999754 6777788887432110 0
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
+.+. ......-.|.--..+++.++...+.+++|||+.||+.|.+.||++++| .+
T Consensus 137 ----~~~~---------------------~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~ 190 (233)
T 3nas_A 137 ----VDPT---------------------TLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVG-VG 190 (233)
T ss_dssp ----CCC------------------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEE-CC
T ss_pred ----eeHh---------------------hCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEE-EC
Confidence 0000 000000012223456666666678899999999999999999999999 77
Q ss_pred chHHHhhhCcEeeccccchh
Q 002275 773 EGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 773 ~~~~~k~~Ad~v~~~~~~l~ 792 (944)
+.++.+ .||+++.+...+.
T Consensus 191 ~~~~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 191 QGQPML-GADLVVRQTSDLT 209 (233)
T ss_dssp --------CSEECSSGGGCC
T ss_pred Cccccc-cCCEEeCChHhCC
Confidence 766666 8999999877765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.45 E-value=2.1e-07 Score=94.53 Aligned_cols=119 Identities=8% Similarity=0.026 Sum_probs=82.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.+++.|+++.++|+. ..+......+|+...-.. +
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~--~------------------------------- 135 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDA--I------------------------------- 135 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSE--E-------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcce--E-------------------------------
Confidence 56799999999999999999999998 445666667776322110 0
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
+.+.. ... ..-.|.--..+++.++...+++++|||+.||++|++.||++++| .|
T Consensus 136 ----~~~~~-----------------~~~----~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~-~~ 189 (221)
T 2wf7_A 136 ----ADPAE-----------------VAA----SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIG-VG 189 (221)
T ss_dssp ----CCTTT-----------------SSS----CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE-ES
T ss_pred ----ecccc-----------------CCC----CCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEE-EC
Confidence 00000 000 00012223445566655667899999999999999999999999 78
Q ss_pred chHHHhhhCcEeeccccchhH
Q 002275 773 EGLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 773 ~~~~~k~~Ad~v~~~~~~l~~ 793 (944)
+.++++ .||+++.+++.+..
T Consensus 190 ~~~~~~-~a~~v~~~~~el~~ 209 (221)
T 2wf7_A 190 RPEDLG-DDIVIVPDTSHYTL 209 (221)
T ss_dssp CHHHHC-SSSEEESSGGGCCH
T ss_pred CHHHhc-cccchhcCHHhCCH
Confidence 777777 89999988777543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=2e-07 Score=99.54 Aligned_cols=66 Identities=24% Similarity=0.283 Sum_probs=54.7
Q ss_pred EEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 724 ICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
.+.++.|. .|...++.+.+. .+.++++||+.||++|++.||+|++| +|+.+.+++.||+++.++..
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCCCCc
Confidence 56677775 587777766543 46799999999999999999999999 89998999999999987554
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.40 E-value=4.3e-07 Score=92.42 Aligned_cols=123 Identities=16% Similarity=0.113 Sum_probs=83.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
.+.+++.+.++.+++.|++++++|+.....+......+|+...-.. ++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~--~~------------------------------ 136 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDI--II------------------------------ 136 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSE--EE------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheee--ee------------------------------
Confidence 4568999999999999999999999998888888888776432110 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEec
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (944)
.... . ..-.| .--..+++.++...+.+++|||+.||++|++.||++++|-
T Consensus 137 -----~~~~----------------------~-~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~ 188 (225)
T 3d6j_A 137 -----GGED----------------------V-THHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGV 188 (225)
T ss_dssp -----CGGG----------------------C-SSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred -----ehhh----------------------c-CCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 0000 0 00011 1223455555555678999999999999999999998772
Q ss_pred c---cchHHHhhh-CcEeeccccchhHHH
Q 002275 771 G---REGLQAARA-ADYSIGKFRFLKRLI 795 (944)
Q Consensus 771 g---n~~~~~k~~-Ad~v~~~~~~l~~l~ 795 (944)
+ ++..+++.. ||+++.+.+.+..++
T Consensus 189 ~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 189 TSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp TTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred CCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 3 334445554 999999887765543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.37 E-value=4.3e-07 Score=93.81 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=86.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++.|++++++|+.....+....+.+|+...-.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 4688999999999999999999999999888888888888743211
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHH----HHHHHHhhc-CCeEEEecCCccchhhhhhcC
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKA----QLVELLKSC-DYRTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~----~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~ 764 (944)
..+..+..+ +.|. .+++.++.. .+.+++|||+.||++|.+.||
T Consensus 155 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG 204 (240)
T 3sd7_A 155 ------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIG 204 (240)
T ss_dssp ------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHT
T ss_pred ------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCC
Confidence 111122122 1233 345555556 778999999999999999999
Q ss_pred e---eEEecccchHH-H-hhhCcEeeccccchhHHH
Q 002275 765 I---GVGISGREGLQ-A-ARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 765 v---gIam~gn~~~~-~-k~~Ad~v~~~~~~l~~l~ 795 (944)
+ +|++ |++..+ . +..||+++.+.+.+..++
T Consensus 205 ~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 205 IDSIGVLY-GYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp CEEEEESS-SSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCEEEEeC-CCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9 5565 544433 3 358999999988876654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.37 E-value=3.9e-07 Score=93.44 Aligned_cols=126 Identities=17% Similarity=0.063 Sum_probs=88.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++.|++++++|+.....+......+|+...-+. ++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 138 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--IV----------------------------- 138 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC--EE-----------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe--ee-----------------------------
Confidence 46789999999999999999999999999989898888887443211 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe---eEE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI---GVG 768 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v---gIa 768 (944)
.+.. .. ...-.|.--..+++.++...+.+++|||+.||++|.+.||+ +|+
T Consensus 139 ------~~~~-----------------~~----~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 191 (233)
T 3s6j_A 139 ------TRDD-----------------VS----YGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLL 191 (233)
T ss_dssp ------CGGG-----------------SS----CCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEG
T ss_pred ------cccc-----------------CC----CCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEe
Confidence 0000 00 00001112234555555556789999999999999999999 555
Q ss_pred ecccchHHHhhh-CcEeeccccchhHHH
Q 002275 769 ISGREGLQAARA-ADYSIGKFRFLKRLI 795 (944)
Q Consensus 769 m~gn~~~~~k~~-Ad~v~~~~~~l~~l~ 795 (944)
++.+...+.++. ||+++.+...+..++
T Consensus 192 ~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 192 SGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp GGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred CCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 533566666664 999999988777654
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.3e-06 Score=82.32 Aligned_cols=141 Identities=16% Similarity=0.202 Sum_probs=88.8
Q ss_pred CcCcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCceeeecCCccHHH
Q 002275 382 KTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 461 (944)
Q Consensus 382 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~a 461 (944)
..||+|-|++++..+...+. -+..+++...+.+. ..+.+|..+|
T Consensus 13 ~~~tit~gnr~vt~v~~~~g-----------------------~~e~elL~lAAs~E-------------~~SeHPla~A 56 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG-----------------------VDEKTLADAAQLAS-------------LADETPEGRS 56 (156)
T ss_dssp --------CEEEEEEEECTT-----------------------SCHHHHHHHHHHTT-------------SSCCSHHHHH
T ss_pred CCCceecCCCeEEEEEecCC-----------------------CCHHHHHHHHHHHh-------------CcCCCHHHHH
Confidence 36999999999999864210 01123444444333 2258999999
Q ss_pred HHHHHHhC-CeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccccccC--C
Q 002275 462 LVHAAAQL-HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--Q 538 (944)
Q Consensus 462 ll~~a~~~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~ 538 (944)
++++|++. +........ . .....+|++..++..|.+ +| .-+.+|+++.|...+... .
T Consensus 57 Iv~~A~~~~~l~~~~~~~-----------~---~~~~~~F~a~~G~~Gv~v----~G--~~v~vGn~~~i~~l~~~~gi~ 116 (156)
T 1svj_A 57 IVILAKQRFNLRERDVQS-----------L---HATFVPFTAQSRMSGINI----DN--RMIRKGSVDAIRRHVEANGGH 116 (156)
T ss_dssp HHHHHHHHTTCCCCCHHH-----------H---TCEEEEEETTTTEEEEEE----TT--EEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCcccccc-----------c---ccceeeccccCCCCeEEE----CC--EEEEEeCcHHHHHHHHHcCCC
Confidence 99999876 543200000 0 012357888777677743 34 457889988776665431 2
Q ss_pred chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccCC
Q 002275 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (944)
Q Consensus 539 ~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~ 616 (944)
.+..+.+.+++++.+|.+++++| .|.+++|+|++.|++||
T Consensus 117 ~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 117 FPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEEECCCC
T ss_pred CcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEEEEEEecCCCC
Confidence 23468888999999999999999 57889999999999996
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.32 E-value=5.6e-07 Score=94.61 Aligned_cols=124 Identities=20% Similarity=0.210 Sum_probs=83.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC-CCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...- .. ++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--~~----------------------------- 151 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF--LV----------------------------- 151 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC--CB-----------------------------
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh--ee-----------------------------
Confidence 56799999999999999999999999988777777666543221 10 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcC-CeEEEecCCccchhhhhhcC---eeE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKAD---IGV 767 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~---vgI 767 (944)
.+.. ... ..-.|.--..+++.++... +++++|||+.||++|++.|| ++|
T Consensus 152 ------~~~~-----------------~~~----~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v 204 (267)
T 1swv_A 152 ------TPDD-----------------VPA----GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204 (267)
T ss_dssp ------CGGG-----------------SSC----CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ------cCCc-----------------cCC----CCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 0000 000 0001223345566666556 78999999999999999999 566
Q ss_pred Eecccc------------------------hHHHhhh-CcEeeccccchhHHH
Q 002275 768 GISGRE------------------------GLQAARA-ADYSIGKFRFLKRLI 795 (944)
Q Consensus 768 am~gn~------------------------~~~~k~~-Ad~v~~~~~~l~~l~ 795 (944)
++ |++ .+++++. ||+++.+...+..++
T Consensus 205 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l 256 (267)
T 1swv_A 205 IL-GSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM 256 (267)
T ss_dssp CT-TCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred cC-CCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHH
Confidence 66 554 3445554 999999887776553
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.32 E-value=5.3e-07 Score=90.23 Aligned_cols=119 Identities=18% Similarity=0.172 Sum_probs=81.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-.+.+++.+.++.+++.|++++++|+....... ....+|+...-.
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~---------------------------------- 128 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT---------------------------------- 128 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE----------------------------------
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee----------------------------------
Confidence 357899999999999999999999999887776 666666522100
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-EEec
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~ 770 (944)
.++.... . ....-.|.--..+++.++...+++++|||+.||++|++.||++ |+|
T Consensus 129 ---~~~~~~~--------------------~-~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~- 183 (207)
T 2go7_A 129 ---EILTSQS--------------------G-FVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF- 183 (207)
T ss_dssp ---EEECGGG--------------------C-CCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-
T ss_pred ---eEEecCc--------------------C-CCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEE-
Confidence 0000000 0 0000012223456666666677899999999999999999998 778
Q ss_pred ccchHHHhhhCcEeeccccchhHH
Q 002275 771 GREGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 771 gn~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+++. . .||+++.+...+..+
T Consensus 184 ~~~~-~---~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 184 LEST-Y---EGNHRIQALADISRI 203 (207)
T ss_dssp SCCS-C---TTEEECSSTTHHHHH
T ss_pred ecCC-C---CCCEEeCCHHHHHHH
Confidence 6665 3 699999887766543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-06 Score=88.43 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=85.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|++.|++++++|+.....+....+.+|+...-.. ++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~------------------------------ 136 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VL------------------------------ 136 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EE------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Ee------------------------------
Confidence 5789999999999999999999999999999999988887432110 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
.+.. .. ...-.|.--..+++.++...+.+++|||+.||++|.+.||+++++..+
T Consensus 137 -----~~~~-----------------~~----~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 137 -----SGEE-----------------FK----ESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp -----EGGG-----------------CS----SCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred -----eccc-----------------cc----CCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence 0000 00 000012223456666666678899999999999999999999887333
Q ss_pred c-hHHHhhhCcEeeccccchhH
Q 002275 773 E-GLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 773 ~-~~~~k~~Ad~v~~~~~~l~~ 793 (944)
. ....+..||+++.+...+..
T Consensus 191 ~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 191 NEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp SSSCCCCTTSSEEESSGGGGGG
T ss_pred CCccchhccHHHHHHHHHHHHh
Confidence 2 22233579999998776654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-06 Score=86.25 Aligned_cols=61 Identities=13% Similarity=0.055 Sum_probs=45.5
Q ss_pred HHHHHHHhhcCCeEEEecCCccchhhhhhcCe---eEEecccchHHHh----hhCcEeeccccchhHHH
Q 002275 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAA----RAADYSIGKFRFLKRLI 795 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v---gIam~gn~~~~~k----~~Ad~v~~~~~~l~~l~ 795 (944)
..+++.++-..+++++|||+.||+.|.+.||+ +|++ |+...... ..||+++.+...+..++
T Consensus 108 ~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 108 RDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQT-GNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp HHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEEST-TTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECC-CCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 34556666567889999999999999999995 5555 55544443 35799999987776654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.3e-06 Score=92.16 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=85.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|++.|++++++|+.+...+......+|+...... .+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~--~~------------------------------ 158 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA--ST------------------------------ 158 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS--EE------------------------------
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc--eE------------------------------
Confidence 6789999999999999999999999998888887777765332000 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcC-CeEEEecCCccchhhhhhcCe---eEE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKADI---GVG 768 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~v---gIa 768 (944)
+.+.. .... .-.|.--..+++.++... +++++|||+.||+.|.+.||+ +|+
T Consensus 159 ----~~~~~-----------------~~~~----kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~ 213 (277)
T 3iru_A 159 ----VFATD-----------------VVRG----RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVS 213 (277)
T ss_dssp ----ECGGG-----------------SSSC----TTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred ----ecHHh-----------------cCCC----CCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 00000 0000 001112234566666667 899999999999999999994 566
Q ss_pred ecc------------------------cchHHHhh-hCcEeeccccchhHHH
Q 002275 769 ISG------------------------REGLQAAR-AADYSIGKFRFLKRLI 795 (944)
Q Consensus 769 m~g------------------------n~~~~~k~-~Ad~v~~~~~~l~~l~ 795 (944)
+ | ++.++.++ .||+++.+...+..++
T Consensus 214 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 214 C-SGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVI 264 (277)
T ss_dssp S-SSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHH
T ss_pred c-CCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHH
Confidence 6 4 23445555 4999999988877664
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.22 E-value=4.4e-06 Score=83.84 Aligned_cols=122 Identities=23% Similarity=0.264 Sum_probs=87.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++ ++++++|+.+...+..+.+.+|+...-.. .+...+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--~~~~~~-------------------------- 119 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc--eeEEcC--------------------------
Confidence 5789999999999999 99999999999999999999987421000 000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEE--EeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEec
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC--RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (944)
...... .-.|..|..+++.++...+.++++||+.||++|.+.||+++++
T Consensus 120 ----------------------------~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~- 170 (206)
T 1rku_A 120 ----------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF- 170 (206)
T ss_dssp ----------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-
T ss_pred ----------------------------CceEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-
Confidence 010101 1356679999999988888999999999999999999999998
Q ss_pred ccchHHHhhhC-cEe-eccccchhH
Q 002275 771 GREGLQAARAA-DYS-IGKFRFLKR 793 (944)
Q Consensus 771 gn~~~~~k~~A-d~v-~~~~~~l~~ 793 (944)
+. ..+.++.+ +++ +.+...+..
T Consensus 171 ~~-~~~~~~~~~~~~~~~~~~~l~~ 194 (206)
T 1rku_A 171 HA-PENVIREFPQFPAVHTYEDLKR 194 (206)
T ss_dssp SC-CHHHHHHCTTSCEECSHHHHHH
T ss_pred CC-cHHHHHHHhhhccccchHHHHH
Confidence 43 44566544 554 555444443
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-06 Score=89.12 Aligned_cols=119 Identities=14% Similarity=0.077 Sum_probs=86.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++.|+++.++|+.+...+......+|+...-.. +
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~------------------------------ 142 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--L------------------------------ 142 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE--E------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce--e------------------------------
Confidence 46789999999999999999999999998888888888887432110 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC------hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (944)
+.++.. |.--..+++.++...+.+++|||+.||+.|.+.||+
T Consensus 143 --------------------------------~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~ 190 (230)
T 3um9_A 143 --------------------------------ISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGY 190 (230)
T ss_dssp --------------------------------EEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred --------------------------------EehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCC
Confidence 010111 112234555555556789999999999999999999
Q ss_pred eEEec---ccchHHHhhhCcEeeccccchhHH
Q 002275 766 GVGIS---GREGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 766 gIam~---gn~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+++|. ++..+..+..||+++.+...+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 191 PVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred EEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 99882 233334456899999988776654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.8e-06 Score=88.48 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=81.7
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++.+++.+.++.|++. |+++.++|+.+...+......+|+...-.. ++
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 141 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GA----------------------------- 141 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EE-----------------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ce-----------------------------
Confidence 5779999999999999 999999999998888888888887432111 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC--hhhH----HHHHHHHh--hcCCeEEEecCCccchhhhhhc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQK----AQLVELLK--SCDYRTLAIGDGGNDVRMIQKA 763 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K----~~iv~~l~--~~~~~v~~iGDg~ND~~ml~~A 763 (944)
.+. +.. ++-+ ..+.+.++ ...+++++|||+.||++|.+.|
T Consensus 142 ------~~~--------------------------~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~a 189 (234)
T 2hcf_A 142 ------FAD--------------------------DALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCAREL 189 (234)
T ss_dssp ------CTT--------------------------TCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTT
T ss_pred ------ecC--------------------------CCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHC
Confidence 000 001 1112 23444554 3457899999999999999999
Q ss_pred Cee---EEecccchHHHh-h-hCcEeeccccchhHHH
Q 002275 764 DIG---VGISGREGLQAA-R-AADYSIGKFRFLKRLI 795 (944)
Q Consensus 764 ~vg---Iam~gn~~~~~k-~-~Ad~v~~~~~~l~~l~ 795 (944)
|++ |++ ++...+.. . .||+++.+.+.+..++
T Consensus 190 G~~~i~v~~-~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 190 DARSIAVAT-GNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp TCEEEEECC-SSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred CCcEEEEcC-CCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 955 444 44333333 3 3899999888776553
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.6e-06 Score=88.83 Aligned_cols=126 Identities=14% Similarity=0.026 Sum_probs=89.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++.|++++++|+.+...+......+|+...-.. ++.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~---------------------------- 147 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--VLS---------------------------- 147 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE--EEE----------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE--EEE----------------------------
Confidence 46789999999999999999999999999888888888887433211 110
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEec-
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS- 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~- 770 (944)
+... . .. .-.|.--..+++.++...+.+++|||+.||+.|.+.||++++|-
T Consensus 148 -------~~~~--------------~-~~------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~ 199 (233)
T 3umb_A 148 -------VDAV--------------R-LY------KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWIN 199 (233)
T ss_dssp -------GGGT--------------T-CC------TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred -------eccc--------------C-CC------CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 0000 0 00 00112223455666656688999999999999999999999882
Q ss_pred --ccchHHHhhhCcEeeccccchhHHH
Q 002275 771 --GREGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 771 --gn~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
+++.+.++..||+++.+...+..++
T Consensus 200 ~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 200 RLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp TTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CCCCCchhccCCCCEEECCHHHHHHHH
Confidence 3444445567999999988876654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.19 E-value=3.1e-06 Score=86.66 Aligned_cols=123 Identities=12% Similarity=0.102 Sum_probs=86.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|++. +++.++|+.+...+....+.+|+...-.. ++
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~------------------------------ 146 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--IT------------------------------ 146 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EE------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eE------------------------------
Confidence 5679999999999999 99999999999888888888887432110 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcC---eeEE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKAD---IGVG 768 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~---vgIa 768 (944)
.+... . .. .-.|.--..+++.++...+.+++|||+. ||+.|.+.|| ++|+
T Consensus 147 -----~~~~~--------------~-~~------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~ 200 (234)
T 3u26_A 147 -----TSEEA--------------G-FF------KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLD 200 (234)
T ss_dssp -----EHHHH--------------T-BC------TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred -----ecccc--------------C-CC------CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEEC
Confidence 00000 0 00 0011123345556655668899999997 9999999999 5667
Q ss_pred ecccchHHHhhhCcEeeccccchhHHH
Q 002275 769 ISGREGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 769 m~gn~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
+ +++..+.+..||+++.+...+..++
T Consensus 201 ~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 201 R-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp S-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred C-CCCccccccCCCEeeCCHHHHHHHH
Confidence 7 6776777779999999987776553
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.18 E-value=4.8e-06 Score=84.91 Aligned_cols=127 Identities=20% Similarity=0.311 Sum_probs=85.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.|++.++++.|+++|++++++||.+...+..+.+.+|+.... +....
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~----~f~~~-------------------------- 134 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN----VFANR-------------------------- 134 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG----EEEEC--------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc----EEeee--------------------------
Confidence 368899999999999999999999999999999999999984200 10000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeE-EEEe-----ChhhHHHHHHHHhh-cC-CeEEEecCCccchhhhhhc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRV-----TPSQKAQLVELLKS-CD-YRTLAIGDGGNDVRMIQKA 763 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~-----~p~~K~~iv~~l~~-~~-~~v~~iGDg~ND~~ml~~A 763 (944)
+..+ ....+ ..+. .+..|..+++.+.+ .+ +.++++||+.||++|.+.|
T Consensus 135 ---~~~~---------------------~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~a 190 (225)
T 1nnl_A 135 ---LKFY---------------------FNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPA 190 (225)
T ss_dssp ---EEEC---------------------TTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTS
T ss_pred ---EEEc---------------------CCCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhC
Confidence 0000 00001 1111 12356666655443 23 6799999999999999999
Q ss_pred CeeEEecccc--hHHHhhhCcEeeccccchhH
Q 002275 764 DIGVGISGRE--GLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 764 ~vgIam~gn~--~~~~k~~Ad~v~~~~~~l~~ 793 (944)
|++|++ +.. .......+|+++.+...+..
T Consensus 191 g~~i~~-~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 191 DAFIGF-GGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp SEEEEE-CSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred CeEEEe-cCccccHHHHhcCCeeecCHHHHHH
Confidence 999888 432 22344578999988766543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.18 E-value=4.7e-06 Score=85.41 Aligned_cols=104 Identities=14% Similarity=0.026 Sum_probs=72.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|++++++||.....+..+++.+|+...-.. .+...+|.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~------------------------- 145 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIAT-DPEYRDGR------------------------- 145 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEEC-EEEEETTE-------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEc-ceEEECCE-------------------------
Confidence 5789999999999999999999999999999999999998421000 00000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEE-EEeChhhHHHHHHHHhh-c------CCeEEEecCCccchhhhhhcC
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKS-C------DYRTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K~~iv~~l~~-~------~~~v~~iGDg~ND~~ml~~A~ 764 (944)
...... ....+..|...++.+.+ . .+.++++||+.||++|++.||
T Consensus 146 ---------------------------~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag 198 (232)
T 3fvv_A 146 ---------------------------YTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVT 198 (232)
T ss_dssp ---------------------------EEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSS
T ss_pred ---------------------------EeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCC
Confidence 000000 01123457665554332 3 368999999999999999999
Q ss_pred eeEEe
Q 002275 765 IGVGI 769 (944)
Q Consensus 765 vgIam 769 (944)
+++++
T Consensus 199 ~~~~~ 203 (232)
T 3fvv_A 199 RPIAA 203 (232)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 99999
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.17 E-value=3.8e-06 Score=85.94 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=81.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|+++|++++++|+.....+....+.+|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~---------------------------------- 147 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD---------------------------------- 147 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee----------------------------------
Confidence 3678999999999999999999999999988888888888743211
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC------hhhHHHHHHHHhhcCC-eEEEecCCccchhhhhhcC
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLKSCDY-RTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~ml~~A~ 764 (944)
..+..+-. |+--..+++.++...+ .+++|||+.||+.|.+.||
T Consensus 148 ------------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG 197 (231)
T 3kzx_A 148 ------------------------------SIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAG 197 (231)
T ss_dssp ------------------------------EEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTT
T ss_pred ------------------------------eEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCC
Confidence 11111111 1222455666665666 8999999999999999999
Q ss_pred e-eEEecccchHHHhhhCcEeeccccchhHH
Q 002275 765 I-GVGISGREGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 765 v-gIam~gn~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+ +|++ +++.. ..+|+++.+...+..+
T Consensus 198 ~~~v~~-~~~~~---~~~~~~~~~~~el~~~ 224 (231)
T 3kzx_A 198 CLPIKY-GSTNI---IKDILSFKNFYDIRNF 224 (231)
T ss_dssp CEEEEE-CC--------CCEEESSHHHHHHH
T ss_pred CeEEEE-CCCCC---CCCceeeCCHHHHHHH
Confidence 7 5666 66543 4678888887776554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.15 E-value=3.8e-06 Score=85.99 Aligned_cols=124 Identities=10% Similarity=0.079 Sum_probs=83.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (944)
.+.+++.+.++.|++.|++++++|+.. ...+......+|+...-.. ++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~--------------------------- 149 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TF--------------------------- 149 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EE---------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--he---------------------------
Confidence 458999999999999999999999998 7777777777776322110 00
Q ss_pred CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcCeeEE
Q 002275 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVG 768 (944)
Q Consensus 690 ~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIa 768 (944)
.+.. .. ..+ -.|.--..+++.++...+++++|||+. ||++|.+.||++++
T Consensus 150 --------~~~~--------------~~-~~k------p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~ 200 (235)
T 2om6_A 150 --------FADE--------------VL-SYK------PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAV 200 (235)
T ss_dssp --------EHHH--------------HT-CCT------TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEE
T ss_pred --------eccc--------------cC-CCC------CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEE
Confidence 0000 00 000 012222345555555567899999999 99999999999998
Q ss_pred ec--ccchHHHhhhCcEeeccccchhHH
Q 002275 769 IS--GREGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 769 m~--gn~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
|- +++..+.+..+|+++.+...+..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 201 WINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp EECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred EECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 82 233333445689999887766544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=2.1e-06 Score=91.16 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=85.6
Q ss_pred ccCCChHHHHHHHHHcCC--eEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 613 RLQDGVPETIETLRKAGI--NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi--~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
++.+++.+.++.|++.|+ +++++|+.....+....+.+|+...-+. ++..+..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--v~~~~~~----------------------- 196 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG--LTYCDYS----------------------- 196 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--EECCCCS-----------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--EEEeccC-----------------------
Confidence 567899999999999999 9999999999888888888887433211 1000000
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHH----HHHHHHhhcC-CeEEEecCCccchhhhhhcCe
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA----QLVELLKSCD-YRTLAIGDGGNDVRMIQKADI 765 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~----~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~v 765 (944)
. .. ...++-|. .+++.++... +.+++|||+.||+.|.+.||+
T Consensus 197 -----------------------------~-~~---~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~ 243 (282)
T 3nuq_A 197 -----------------------------R-TD---TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGM 243 (282)
T ss_dssp -----------------------------S-CS---SCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred -----------------------------C-Cc---ccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCC
Confidence 0 00 00122233 3455555556 889999999999999999999
Q ss_pred eEEecccchHHH------hhhCcEeeccccchhHH
Q 002275 766 GVGISGREGLQA------ARAADYSIGKFRFLKRL 794 (944)
Q Consensus 766 gIam~gn~~~~~------k~~Ad~v~~~~~~l~~l 794 (944)
|++| +++.... ...||+++.+...+..+
T Consensus 244 ~~~~-~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 244 KTCI-HLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SEEE-EECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred eEEE-EEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9888 5554433 23789999987776654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.9e-06 Score=87.75 Aligned_cols=122 Identities=19% Similarity=0.155 Sum_probs=84.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|+++|++++++|+.+...+..+.+.+|+...-. .+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~---~~----------------------------- 160 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS---EM----------------------------- 160 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS---EE-----------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE---EE-----------------------------
Confidence 4678999999999999999999999999988889999988743211 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC--hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
+.+.. +.... |.--..+++.++...+.+++|||+.||++|.+.||++++.
T Consensus 161 -----~~~~~-----------------------~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 161 -----LGGQS-----------------------LPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp -----ECTTT-----------------------SSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred -----Eeccc-----------------------CCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00000 00011 2234456666665667899999999999999999999543
Q ss_pred cccc----hHHHhhhCcEeeccccchhH
Q 002275 770 SGRE----GLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 770 ~gn~----~~~~k~~Ad~v~~~~~~l~~ 793 (944)
-..+ .+..+..||+++.+...+..
T Consensus 213 v~~g~~~~~~~~~~~ad~vi~~~~el~~ 240 (243)
T 2hsz_A 213 LTYGYNYNIPIAQSKPDWIFDDFADILK 240 (243)
T ss_dssp ESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred EcCCCCchhhhhhCCCCEEECCHHHHHH
Confidence 1321 22234579999987666543
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=1.3e-06 Score=87.94 Aligned_cols=120 Identities=17% Similarity=0.178 Sum_probs=82.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|+++ ++++++|+.+...+....+.+|+...-.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 126 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA---------------------------------- 126 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE----------------------------------
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc----------------------------------
Confidence 35789999999999999 9999999999888888887777632100
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC--hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
.++.+.. . ..-- |.--..+++.++...+.+++|||+.||++|.+.||++++|
T Consensus 127 ---~~~~~~~----------------------~-~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~ 180 (209)
T 2hdo_A 127 ---VTISADD----------------------T-PKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 180 (209)
T ss_dssp ---EEECGGG----------------------S-SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred ---EEEecCc----------------------C-CCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEE
Confidence 0000000 0 0001 2222455566655567899999999999999999999987
Q ss_pred c--cc-chHHHhhhCcEeeccccchhH
Q 002275 770 S--GR-EGLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 770 ~--gn-~~~~~k~~Ad~v~~~~~~l~~ 793 (944)
. |+ +.+.++. ||+++.+...+..
T Consensus 181 ~~~~~~~~~~~~~-a~~~~~~~~el~~ 206 (209)
T 2hdo_A 181 AVWGMDPNADHQK-VAHRFQKPLDILE 206 (209)
T ss_dssp EGGGCCTTGGGSC-CSEEESSGGGGGG
T ss_pred EcCCCCChhhhcc-CCEEeCCHHHHHH
Confidence 2 22 2344555 9999988766543
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.11 E-value=1.1e-06 Score=91.45 Aligned_cols=59 Identities=14% Similarity=0.094 Sum_probs=45.2
Q ss_pred HHHHHhhcC--CeEEEecCCccchhhhhhcC---eeEEecccchHHHhhhCcEeeccccchhHHH
Q 002275 736 LVELLKSCD--YRTLAIGDGGNDVRMIQKAD---IGVGISGREGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 736 iv~~l~~~~--~~v~~iGDg~ND~~ml~~A~---vgIam~gn~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
+++.++... +++++|||+.||+.|.+.|| ++|++ |++..+.+..||+++.+...+...+
T Consensus 180 ~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 180 CAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPD-GNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp HHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCC-TTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred HHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcC-CCCchhhcccccEeecCHHHhhHHH
Confidence 344444334 88999999999999999999 55566 6666667789999999987775543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=5e-06 Score=85.41 Aligned_cols=121 Identities=17% Similarity=0.118 Sum_probs=85.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|+ .|++++++|+.+...+....+.+|+...-+. +
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~--~------------------------------ 152 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK--I------------------------------ 152 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE--E------------------------------
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee--E------------------------------
Confidence 357899999999999 9999999999988888888888776432110 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC----h--hhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcC
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT----P--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKAD 764 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----p--~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~ 764 (944)
+..+.. | .--..+++.++...+.+++|||+. ||+.|.+.||
T Consensus 153 --------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG 200 (240)
T 3qnm_A 153 --------------------------------ILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVG 200 (240)
T ss_dssp --------------------------------EEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTT
T ss_pred --------------------------------EEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcC
Confidence 111111 1 112334455554567899999995 9999999999
Q ss_pred eeEEecccchH--HHhhhCcEeeccccchhHHHhhhhh
Q 002275 765 IGVGISGREGL--QAARAADYSIGKFRFLKRLILVHGR 800 (944)
Q Consensus 765 vgIam~gn~~~--~~k~~Ad~v~~~~~~l~~l~l~~gr 800 (944)
++++| .|.+. ..+..+|+++.+...+..+ .+|.
T Consensus 201 ~~~~~-~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~ 235 (240)
T 3qnm_A 201 MHQAF-YNVTERTVFPFQPTYHIHSLKELMNL--LEGH 235 (240)
T ss_dssp CEEEE-ECCSCCCCCSSCCSEEESSTHHHHHH--TC--
T ss_pred CeEEE-EcCCCCCCcCCCCceEECCHHHHHHH--Hhcc
Confidence 99999 55544 4455899999998776653 4554
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.08 E-value=6.5e-06 Score=86.44 Aligned_cols=59 Identities=15% Similarity=0.134 Sum_probs=40.8
Q ss_pred HHHHHhhcCCeEEEecCC-ccchhhhhhcCeeEEec--cc-chHHHhh---hCcEeeccccchhHH
Q 002275 736 LVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVGIS--GR-EGLQAAR---AADYSIGKFRFLKRL 794 (944)
Q Consensus 736 iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIam~--gn-~~~~~k~---~Ad~v~~~~~~l~~l 794 (944)
+++.+....+++++|||+ .||++|++.||++.++. |+ ..+++++ .||+++.+...+..-
T Consensus 192 ~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~ 257 (266)
T 3pdw_A 192 AMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPY 257 (266)
T ss_dssp HHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHH
T ss_pred HHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHH
Confidence 444444446789999999 79999999999987662 22 3344454 499999988776554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.07 E-value=7.5e-06 Score=83.54 Aligned_cols=118 Identities=15% Similarity=0.064 Sum_probs=81.4
Q ss_pred cccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 612 DRLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~G-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
-++.+++.+.++.|+++| +++.++|+.....+......+|+...-.
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~--------------------------------- 150 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD--------------------------------- 150 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS---------------------------------
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh---------------------------------
Confidence 367899999999999999 9999999988888788887777632211
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcCeeE
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGV 767 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgI 767 (944)
.++..-.| .--..+++.++...+++++|||+. ||+.|.+.||+++
T Consensus 151 --------------------------------~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~ 198 (234)
T 3ddh_A 151 --------------------------------HIEVMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYG 198 (234)
T ss_dssp --------------------------------EEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEE
T ss_pred --------------------------------eeeecCCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeE
Confidence 11111112 112234455555567899999996 9999999999998
Q ss_pred Eec------ccchHHHhhh-CcEeeccccchhHH
Q 002275 768 GIS------GREGLQAARA-ADYSIGKFRFLKRL 794 (944)
Q Consensus 768 am~------gn~~~~~k~~-Ad~v~~~~~~l~~l 794 (944)
++- |++..+.+.. +|+++.+...+..+
T Consensus 199 v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 199 VHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred EEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 873 2443333444 49999987766543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=5.8e-06 Score=85.22 Aligned_cols=124 Identities=14% Similarity=0.033 Sum_probs=83.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|++++++|+.+...+....+.+|+...-.. ++.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 153 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS--CLS----------------------------- 153 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE--EEE-----------------------------
Confidence 5789999999999999999999999999888888888887432110 100
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe--c
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--S 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam--~ 770 (944)
+... . .. .-.|.--..+++.++...+++++|||+.||+.|.+.||+.++. .
T Consensus 154 ------~~~~--------------~-~~------Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~ 206 (240)
T 2no4_A 154 ------ADDL--------------K-IY------KPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINR 206 (240)
T ss_dssp ------GGGT--------------T-CC------TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECT
T ss_pred ------cccc--------------C-CC------CCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECC
Confidence 0000 0 00 0012223345556655567899999999999999999966543 1
Q ss_pred ccchHHHhhhC-cEeeccccchhHH
Q 002275 771 GREGLQAARAA-DYSIGKFRFLKRL 794 (944)
Q Consensus 771 gn~~~~~k~~A-d~v~~~~~~l~~l 794 (944)
++..+..+..+ |+++.+...+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~el~~~ 231 (240)
T 2no4_A 207 QGNPPEYEFAPLKHQVNSLSELWPL 231 (240)
T ss_dssp TCCCCCCTTSCCSEEESSGGGHHHH
T ss_pred CCCCCcccCCCCceeeCCHHHHHHH
Confidence 33322334467 9999887766554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.06 E-value=5.3e-06 Score=86.64 Aligned_cols=122 Identities=15% Similarity=0.025 Sum_probs=85.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
.-++.+++.+.++.|++.|++++++|+.....+....+.+|+...
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~----------------------------------- 152 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL----------------------------------- 152 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-----------------------------------
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-----------------------------------
Confidence 346789999999999999999999999999888888888876211
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC-------hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhc
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT-------PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 763 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A 763 (944)
|.. ..+..+.. |.--..+++.++...+++++|||+.||+.|.+.|
T Consensus 153 ----------------------f~~------~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~a 204 (259)
T 4eek_A 153 ----------------------AGE------HIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAA 204 (259)
T ss_dssp ----------------------HCS------CEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred ----------------------ccc------eEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 000 00000111 1122345555555567899999999999999999
Q ss_pred CeeEEecccc-------hHHHhh-hCcEeeccccchhHHH
Q 002275 764 DIGVGISGRE-------GLQAAR-AADYSIGKFRFLKRLI 795 (944)
Q Consensus 764 ~vgIam~gn~-------~~~~k~-~Ad~v~~~~~~l~~l~ 795 (944)
|++..+-.++ .++..+ .||+++.+...+..++
T Consensus 205 G~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 205 GATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAAL 244 (259)
T ss_dssp TCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHH
T ss_pred CCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHH
Confidence 9994332332 334444 5999999988877664
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.01 E-value=7.9e-06 Score=82.34 Aligned_cols=115 Identities=16% Similarity=0.129 Sum_probs=81.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 577999999999999 99999999998888888888888743211
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHH----HHHhhcCCeEEEecCCccchhhhhhcCe---
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADI--- 765 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv----~~l~~~~~~v~~iGDg~ND~~ml~~A~v--- 765 (944)
..+.++-.++-|..+. +.++-..+++++|||+.||+.|.+.||+
T Consensus 128 -----------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i 178 (210)
T 2ah5_A 128 -----------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -----------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -----------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEE
Confidence 1222221122344433 3343345789999999999999999999
Q ss_pred eEEecccc-hHHHhh-hCcEeeccccchhH
Q 002275 766 GVGISGRE-GLQAAR-AADYSIGKFRFLKR 793 (944)
Q Consensus 766 gIam~gn~-~~~~k~-~Ad~v~~~~~~l~~ 793 (944)
+|++ |++ .++.+. .||+++.+...+..
T Consensus 179 ~v~~-~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 179 AITW-GFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESS-SSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEcC-CCCCHHHHHhCCCCEEECCHHHHHH
Confidence 5666 554 444554 68999988666543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.4e-05 Score=80.52 Aligned_cols=124 Identities=14% Similarity=0.131 Sum_probs=81.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|+++|+++.++|+.....+......+|+...-.. ++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~------------------------------ 141 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEH--VI------------------------------ 141 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSE--EE------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccE--EE------------------------------
Confidence 4779999999999999999999999988888888888886432110 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcCeeEEec-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGIS- 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIam~- 770 (944)
.+.. .. ...-.|.--..+++.++...+.+++|||+. ||+.|.+.||++++.-
T Consensus 142 -----~~~~-----------------~~----~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~ 195 (241)
T 2hoq_A 142 -----ISDF-----------------EG----VKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFR 195 (241)
T ss_dssp -----EGGG-----------------GT----CCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC
T ss_pred -----EeCC-----------------CC----CCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEEC
Confidence 0000 00 000011112344555555567899999998 9999999999986541
Q ss_pred -ccchHHHhh---hCcEeeccccchhHH
Q 002275 771 -GREGLQAAR---AADYSIGKFRFLKRL 794 (944)
Q Consensus 771 -gn~~~~~k~---~Ad~v~~~~~~l~~l 794 (944)
|........ .+|+++.+...+..+
T Consensus 196 ~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (241)
T 2hoq_A 196 YGKHSERELEYRKYADYEIDNLESLLEV 223 (241)
T ss_dssp CSCCCHHHHTTGGGCSEEESSTTHHHHH
T ss_pred CCCCCcccccccCCCCEEECCHHHHHHH
Confidence 333222332 689999887666544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.00 E-value=8.3e-06 Score=84.10 Aligned_cols=116 Identities=12% Similarity=0.156 Sum_probs=79.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+. .-.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~----------------------------------- 153 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD----------------------------------- 153 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS-----------------------------------
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee-----------------------------------
Confidence 46789999999999999999999999888888888887763 211
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhH----HHHHHHHhhcCCeEEEecCCccchhhhhhcCee
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
..+.++..+ +-| ..+++.++-..+++++|||+.||+.|.+.||+.
T Consensus 154 -----------------------------~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~ 204 (240)
T 2hi0_A 154 -----------------------------FALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMD 204 (240)
T ss_dssp -----------------------------EEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 011111111 112 345555555567899999999999999999995
Q ss_pred -EEec-ccch-HHHhh-hCcEeeccccchhH
Q 002275 767 -VGIS-GREG-LQAAR-AADYSIGKFRFLKR 793 (944)
Q Consensus 767 -Iam~-gn~~-~~~k~-~Ad~v~~~~~~l~~ 793 (944)
|++. |+.. .+.+. .||+++.+...+..
T Consensus 205 ~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~ 235 (240)
T 2hi0_A 205 EIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235 (240)
T ss_dssp EEEESSSSSCHHHHHHTTCCCEECSHHHHHH
T ss_pred EEEECCCCCchhHHHhcCCCEEECCHHHHHH
Confidence 3331 4322 44444 68999987665543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.99 E-value=6.8e-06 Score=84.12 Aligned_cols=124 Identities=12% Similarity=0.097 Sum_probs=84.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+...-.. ++.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 143 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLS----------------------------- 143 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe--EEE-----------------------------
Confidence 5789999999999999999999999998888888888887432110 100
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
+... . ...-.|.--..+++.++...+++++|||+.||+.|.+.||+++++-..
T Consensus 144 ------~~~~-----------------~----~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 196 (232)
T 1zrn_A 144 ------VDPV-----------------Q----VYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 196 (232)
T ss_dssp ------SGGG-----------------T----CCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred ------eccc-----------------C----CCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 0000 0 000012223345566655567899999999999999999999887222
Q ss_pred ---chHHHhhhCcEeeccccchhHH
Q 002275 773 ---EGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 773 ---~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
..+..+..||+++.+...+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 197 TGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp TCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred CCCCccccCCCCCEEECCHHHHHHH
Confidence 2233345789999876665443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.98 E-value=9e-06 Score=89.33 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=39.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~ 654 (944)
++.|++++.|+.||++|++++|+||.....+..+|.++|+..
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNY 262 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSC
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCccc
Confidence 589999999999999999999999999999999999998743
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.98 E-value=7.5e-06 Score=86.02 Aligned_cols=44 Identities=9% Similarity=0.065 Sum_probs=36.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFIS 654 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TG---d~~~~a~~ia~~~gi~~ 654 (944)
.+.+-++++++|++++++|++++++|| |+..........+|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 455667899999999999999999999 56666667777888754
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.98 E-value=6.8e-06 Score=84.88 Aligned_cols=125 Identities=12% Similarity=0.075 Sum_probs=78.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.+++.+.++.|+++|++++++|+.....+...... |+...-....++
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~----------------------------- 156 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMV----------------------------- 156 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEE-----------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEE-----------------------------
Confidence 46789999999999999999999999887766666665 653221000000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Eec
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GIS 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~ 770 (944)
.+.. .....-.|.--..+++.++...+.+++|||+.||+.|.+.||++. ++
T Consensus 157 ------~~~~---------------------~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v- 208 (247)
T 3dv9_A 157 ------TAFD---------------------VKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAV- 208 (247)
T ss_dssp ------CGGG---------------------CSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEE-
T ss_pred ------eccc---------------------CCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEE-
Confidence 0000 000000122234456666656788999999999999999999764 44
Q ss_pred ccc--h-HHHhh-hCcEeeccccchhHH
Q 002275 771 GRE--G-LQAAR-AADYSIGKFRFLKRL 794 (944)
Q Consensus 771 gn~--~-~~~k~-~Ad~v~~~~~~l~~l 794 (944)
.++ . ....+ .||+++.+...+..+
T Consensus 209 ~~~~~~~~~l~~~~ad~v~~~~~el~~~ 236 (247)
T 3dv9_A 209 NTGPLHDNVLLNEGANLLFHSMPDFNKN 236 (247)
T ss_dssp CCSSSCHHHHHTTTCSEEESSHHHHHHH
T ss_pred cCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 332 2 22222 799999988776654
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.97 E-value=7.3e-06 Score=83.41 Aligned_cols=125 Identities=17% Similarity=0.216 Sum_probs=85.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.|++.++++.|+++|++++++|+.+...+....+.+|+...-.. ++
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--i~----------------------------- 130 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--IV----------------------------- 130 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EE-----------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE--EE-----------------------------
Confidence 46789999999999999999999999998888888888887422110 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-EEec
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~ 770 (944)
.+.. .....-.|.-...+++.++...+.+++|||+.||++|.+.||++ |++.
T Consensus 131 ------~~~~---------------------~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 131 ------GGDT---------------------FGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp ------CTTS---------------------SCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred ------ecCc---------------------CCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 0000 00000012233455666665667899999999999999999998 6662
Q ss_pred -ccchHHHhhhCcEeeccccchhHHH
Q 002275 771 -GREGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 771 -gn~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
|+...+. ..||+++.+...+..++
T Consensus 184 ~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 184 WGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp TSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CCCCCccc-cCCCEEECCHHHHHHHH
Confidence 2222222 56899998877765543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.95 E-value=7.5e-06 Score=86.44 Aligned_cols=121 Identities=9% Similarity=0.005 Sum_probs=82.7
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.+.+++.+.++.|++. |+++.++|+.....+....+.+|+.... . ++
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~-~--i~----------------------------- 161 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPE-Y--FI----------------------------- 161 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCS-S--EE-----------------------------
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccC-E--EE-----------------------------
Confidence 4679999999999999 9999999999988888888777763210 0 10
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhh-------cCCeEEEecCCccchhhhhhcC
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~-------~~~~v~~iGDg~ND~~ml~~A~ 764 (944)
.+.. .... .-.|+--..+++.++. ..+++++|||+.||++|++.||
T Consensus 162 ------~~~~-----------------~~~~----kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG 214 (275)
T 2qlt_A 162 ------TAND-----------------VKQG----KPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAG 214 (275)
T ss_dssp ------CGGG-----------------CSSC----TTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTT
T ss_pred ------Eccc-----------------CCCC----CCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcC
Confidence 0000 0000 0012223455666666 6678999999999999999999
Q ss_pred eeEEe--cccchHHHhh-hCcEeeccccchh
Q 002275 765 IGVGI--SGREGLQAAR-AADYSIGKFRFLK 792 (944)
Q Consensus 765 vgIam--~gn~~~~~k~-~Ad~v~~~~~~l~ 792 (944)
++++| .+++..+.++ .||+++.+...+.
T Consensus 215 ~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 215 CKIVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp CEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred CEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 77665 1444455555 5999998766643
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.95 E-value=6.9e-06 Score=84.81 Aligned_cols=126 Identities=14% Similarity=0.055 Sum_probs=80.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.+++.+.++.|+++|+++.++|+.....+...... |+...-....++
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~----------------------------- 157 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMV----------------------------- 157 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEE-----------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEE-----------------------------
Confidence 46789999999999999999999999887766666555 653321000000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
.+.. .....-.|.--..+++.++...+++++|||+.||+.|.+.||++.++-.
T Consensus 158 ------~~~~---------------------~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 210 (243)
T 3qxg_A 158 ------TAFD---------------------VKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN 210 (243)
T ss_dssp ------CTTT---------------------CSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred ------eHHh---------------------CCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 0000 0000001222334555665566889999999999999999999654324
Q ss_pred cch---HHHh-hhCcEeeccccchhHH
Q 002275 772 REG---LQAA-RAADYSIGKFRFLKRL 794 (944)
Q Consensus 772 n~~---~~~k-~~Ad~v~~~~~~l~~l 794 (944)
++. .+.. ..||+++.+...+..+
T Consensus 211 ~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 211 TGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp CSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred CCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 332 2222 2699999987776554
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-05 Score=82.22 Aligned_cols=120 Identities=14% Similarity=0.172 Sum_probs=79.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC-CCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++.+++.+.++.++. +++++|+.+...+......+|+...- .. ++
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~--~~----------------------------- 132 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH--IY----------------------------- 132 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC--EE-----------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccce--EE-----------------------------
Confidence 457788888887764 99999999988888888888874321 10 00
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-EE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VG 768 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Ia 768 (944)
.+.. .. .. +..| .--..+++.++...+++++|||+.||++|++.||++ |+
T Consensus 133 ------~~~~--------------~~-~~------~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~ 185 (229)
T 2fdr_A 133 ------SAKD--------------LG-AD------RVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIG 185 (229)
T ss_dssp ------EHHH--------------HC-TT------CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred ------eccc--------------cc-cC------CCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEE
Confidence 0000 00 00 0011 122345555555567899999999999999999998 66
Q ss_pred ecccchH-------HHhhh-CcEeeccccchhHH
Q 002275 769 ISGREGL-------QAARA-ADYSIGKFRFLKRL 794 (944)
Q Consensus 769 m~gn~~~-------~~k~~-Ad~v~~~~~~l~~l 794 (944)
| +++.. ++++. ||+++.+...+..+
T Consensus 186 ~-~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 186 F-TGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp E-CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred E-ecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 6 55433 36666 99999987776544
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.92 E-value=2.2e-05 Score=80.48 Aligned_cols=119 Identities=18% Similarity=0.172 Sum_probs=83.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.+++.+.++.|++. +++.++|+.....+......+|+...-..
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 147 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKD--------------------------------- 147 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhhe---------------------------------
Confidence 36789999999999999 99999999998888888888887432110
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC------hhhHHHHHHHHh-hcCCeEEEecCCc-cchhhhhhc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLK-SCDYRTLAIGDGG-NDVRMIQKA 763 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------p~~K~~iv~~l~-~~~~~v~~iGDg~-ND~~ml~~A 763 (944)
.+..+.. |.--..+++.++ ...+.+++|||+. ||+.|.+.|
T Consensus 148 -------------------------------~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~a 196 (238)
T 3ed5_A 148 -------------------------------IFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLA 196 (238)
T ss_dssp -------------------------------EEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred -------------------------------EEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHC
Confidence 0110111 111223444444 4457899999998 999999999
Q ss_pred CeeEEeccc--chHHHhhhCcEeeccccchhHHH
Q 002275 764 DIGVGISGR--EGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 764 ~vgIam~gn--~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
|++.++-+. .....+..||+++.+...+..++
T Consensus 197 G~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 197 GLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred CCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 996543133 24445568999999988877664
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.90 E-value=4.9e-06 Score=86.48 Aligned_cols=121 Identities=10% Similarity=0.052 Sum_probs=82.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+. . . .+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f--~--~~------------------------------ 163 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-W--D--ML------------------------------ 163 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-C--S--EE------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-c--c--eE------------------------------
Confidence 5678999999999986 999999999988888888888873 1 0 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
+..+. .. .. .-.|.--..+++.++...+.+++|||+.||+.|.+.||++++| .+
T Consensus 164 ----~~~~~--------------~~-~~------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~ 217 (254)
T 3umc_A 164 ----LCADL--------------FG-HY------KPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAF-IA 217 (254)
T ss_dssp ----CCHHH--------------HT-CC------TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEE-EC
T ss_pred ----Eeecc--------------cc-cC------CCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEE-Ee
Confidence 00000 00 00 0011122345555555568899999999999999999999999 55
Q ss_pred --------chHHH--hhhCcEeeccccchhHHH
Q 002275 773 --------EGLQA--ARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 773 --------~~~~~--k~~Ad~v~~~~~~l~~l~ 795 (944)
+.+++ +..||+++.+...+..++
T Consensus 218 ~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 218 RPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp CTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred cCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 22223 457999999977766553
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.90 E-value=2.8e-05 Score=79.93 Aligned_cols=137 Identities=12% Similarity=0.173 Sum_probs=87.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.|++.++|+.|+++|++++++|+.+...+..+.+ |+... . .++..+... ...
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~--~v~~~~~~~--------------------~~~ 130 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D--RIYCNHASF--------------------DND 130 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G--GEEEEEEEC--------------------SSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C--eEEeeeeEE--------------------cCC
Confidence 4688999999999999999999999999888877776 65332 1 122111000 000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
...... . ......+.+-....|..+++.++...+.++++||+.+|++|.+.||+.++. .
T Consensus 131 ~~~~~~-~-------------------kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~-~ 189 (236)
T 2fea_A 131 YIHIDW-P-------------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-D 189 (236)
T ss_dssp BCEEEC-T-------------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-H
T ss_pred ceEEec-C-------------------CCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec-h
Confidence 000000 0 000000011124468899999887788999999999999999999999875 3
Q ss_pred cchHHHhhh--CcEeeccccchhHH
Q 002275 772 REGLQAARA--ADYSIGKFRFLKRL 794 (944)
Q Consensus 772 n~~~~~k~~--Ad~v~~~~~~l~~l 794 (944)
.....+... +|+++.+...+..+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 190 YLLNECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp HHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred HHHHHHHHCCCCeeecCCHHHHHHH
Confidence 223333333 78888877666544
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1.9e-05 Score=82.07 Aligned_cols=122 Identities=16% Similarity=0.132 Sum_probs=83.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+ |++++++|+.+...+....+.+|+...-.. ++.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--~~~----------------------------- 139 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VIS----------------------------- 139 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccE--EEE-----------------------------
Confidence 67899999999999 999999999999888888888887432110 100
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
+... . ...-.|.--..+++.++...+++++|||+.||+.|.+.||+++++ .+
T Consensus 140 ------~~~~-----------------~----~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~-~~ 191 (253)
T 1qq5_A 140 ------VDAK-----------------R----VFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVAR-VA 191 (253)
T ss_dssp ------GGGG-----------------T----CCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEE-EC
T ss_pred ------cccc-----------------C----CCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEE-EC
Confidence 0000 0 000012223345555555567899999999999999999999988 44
Q ss_pred c---------------------------hHHHhhhCcEeeccccchhHHH
Q 002275 773 E---------------------------GLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 773 ~---------------------------~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
. .+..+..+|+++.+...+..++
T Consensus 192 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 192 RLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp CSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred CcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 4 1223346899998887776553
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=4.1e-05 Score=77.09 Aligned_cols=134 Identities=16% Similarity=0.191 Sum_probs=78.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh---------------hhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHH
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQ---------------NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLE 677 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (944)
++.|++.++|+.|+++|++++++|+++. ..+....+.+|+. - . .++...... ...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f--~-~~~~~~~~~-~~~----- 119 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-L--D-GIYYCPHHP-QGS----- 119 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-C--S-EEEEECCBT-TCS-----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-e--E-EEEECCcCC-CCc-----
Confidence 7889999999999999999999999994 5556666666653 1 0 011000000 000
Q ss_pred HHHHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccch
Q 002275 678 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDV 757 (944)
Q Consensus 678 ~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~ 757 (944)
.+ . .........-.|.--..+++.+....+++++|||+.||+
T Consensus 120 --------------------~~---------------~---~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di 161 (211)
T 2gmw_A 120 --------------------VE---------------E---FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDM 161 (211)
T ss_dssp --------------------SG---------------G---GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHH
T ss_pred --------------------cc---------------c---cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 00 0 000000000011122345555555567899999999999
Q ss_pred hhhhhcCee--EEec-ccchHHH-hhhCcEeeccccchhHH
Q 002275 758 RMIQKADIG--VGIS-GREGLQA-ARAADYSIGKFRFLKRL 794 (944)
Q Consensus 758 ~ml~~A~vg--Iam~-gn~~~~~-k~~Ad~v~~~~~~l~~l 794 (944)
.|.+.||+. |.+. |....+. ...+|+++.+...+..+
T Consensus 162 ~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 162 QAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp HHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred HHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 999999964 3441 3322222 33689999887666544
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.84 E-value=9.8e-06 Score=83.99 Aligned_cols=119 Identities=7% Similarity=0.017 Sum_probs=82.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|++. +++.++|+.+...+..+...+|+. .+. ++
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-f~~---~~------------------------------ 160 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP-WDV---II------------------------------ 160 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC-CSC---CC------------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC-eeE---EE------------------------------
Confidence 5679999999999997 999999999988888888888873 100 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEec
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (944)
.+. .+ ....|+ --..+++.++...+++++|||+.||+.|.+.||++++|
T Consensus 161 -----~~~--------------~~---------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~- 211 (254)
T 3umg_A 161 -----GSD--------------IN---------RKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAF- 211 (254)
T ss_dssp -----CHH--------------HH---------TCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEE-
T ss_pred -----EcC--------------cC---------CCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEE-
Confidence 000 00 001121 12234445544567899999999999999999999999
Q ss_pred ccchH--------H--HhhhCcEeeccccchhHHH
Q 002275 771 GREGL--------Q--AARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 771 gn~~~--------~--~k~~Ad~v~~~~~~l~~l~ 795 (944)
.+... + .+..+|+++.+...+..++
T Consensus 212 ~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l 246 (254)
T 3umg_A 212 ILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQL 246 (254)
T ss_dssp ECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHH
T ss_pred EecCCcCCCCccccccccCCCceEECCHHHHHHHh
Confidence 44211 1 2457899999988877664
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.80 E-value=3.1e-05 Score=76.31 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=69.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
.+.+++.+.++.|+++|++++++|+.+. .+......+|+...-.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~----------------------------------- 125 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFT----------------------------------- 125 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEE-----------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhee-----------------------------------
Confidence 3679999999999999999999998864 4566666776532100
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC--hhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEec
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (944)
.+..+.. + ..-. |.--..+++.++.. ++++|||+.||++|.+.||+++++
T Consensus 126 --~~~~~~~----------------------~-~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~- 177 (190)
T 2fi1_A 126 --EVVTSSS----------------------G-FKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHL- 177 (190)
T ss_dssp --EEECGGG----------------------C-CCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEE-
T ss_pred --eeeeccc----------------------c-CCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEE-
Confidence 0000000 0 0001 11223344444433 899999999999999999999988
Q ss_pred ccchHHHhhhCc
Q 002275 771 GREGLQAARAAD 782 (944)
Q Consensus 771 gn~~~~~k~~Ad 782 (944)
-+.+...++..+
T Consensus 178 ~~~~~~~~~~l~ 189 (190)
T 2fi1_A 178 FTSIVNLRQVLD 189 (190)
T ss_dssp CSCHHHHHHHHT
T ss_pred ECCCCChhhccC
Confidence 566666665443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.79 E-value=2.1e-05 Score=78.44 Aligned_cols=121 Identities=8% Similarity=0.046 Sum_probs=80.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
-++.|++.+ ++.|+++ +++.++|+.+...+..+...+|+...-.. ++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 119 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IF----------------------------- 119 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EE-----------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EE-----------------------------
Confidence 367799999 9999999 99999999998888888888887432110 10
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecc
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (944)
.+... ...+ -.|.--..+++.++ .+.+++|||+.||+.|.+.||+++++-.
T Consensus 120 ------~~~~~---------------~~~K------p~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~ 170 (201)
T 2w43_A 120 ------SAESV---------------KEYK------PSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVN 170 (201)
T ss_dssp ------EGGGG---------------TCCT------TCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred ------ehhhc---------------CCCC------CCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEEC
Confidence 00000 0000 01222234556665 6789999999999999999999977622
Q ss_pred ---cchHHHhhhCcEeeccccchhHH
Q 002275 772 ---REGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 772 ---n~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+..+..+..||+++.+...+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 171 RKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp SSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred CCCCCccccCCCCCEEECCHHHHHHH
Confidence 22223344689998886665443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.69 E-value=2.4e-05 Score=81.83 Aligned_cols=123 Identities=11% Similarity=0.044 Sum_probs=83.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.++++.|++.|++++++|+... .+..+.+.+|+...-.. ++
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~--~~------------------------------ 152 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF--VL------------------------------ 152 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC--EE------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE--EE------------------------------
Confidence 5789999999999999999999999765 46777788887432111 10
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcCeeEEecc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG 771 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIam~g 771 (944)
.+.. . . ...-.|.--..+++.++...+.+++|||+. ||+.|.+.||++++| .
T Consensus 153 -----~~~~--------------~---~----~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~-~ 205 (263)
T 3k1z_A 153 -----TSEA--------------A---G----WPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFL-V 205 (263)
T ss_dssp -----EHHH--------------H---S----SCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEE-E
T ss_pred -----eecc--------------c---C----CCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEE-E
Confidence 0000 0 0 000022233455666666678899999997 999999999999988 4
Q ss_pred cchHHHh------hhCcEeeccccchhHHH
Q 002275 772 REGLQAA------RAADYSIGKFRFLKRLI 795 (944)
Q Consensus 772 n~~~~~k------~~Ad~v~~~~~~l~~l~ 795 (944)
+.+...+ ..||+++.+...+..++
T Consensus 206 ~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 206 VGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp CCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 4332222 26899999988877664
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.68 E-value=7.4e-05 Score=73.58 Aligned_cols=41 Identities=22% Similarity=0.232 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~-~~~a~~ia~~~gi~ 653 (944)
++.|++.++|+.|+++|++++++||++ ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 678999999999999999999999999 68888899888874
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00018 Score=74.36 Aligned_cols=116 Identities=14% Similarity=0.030 Sum_probs=79.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.+.++.|+ .|++++++|+.....+......+|+...-.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------------- 155 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP----------------------------------- 155 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-----------------------------------
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-----------------------------------
Confidence 56799999999999 999999999998887777777777632211
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC--hhhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcCeeEEe
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGI 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIam 769 (944)
.+++.-. |.--..+++.++...+.+++|||+. ||+.|.+.||+++++
T Consensus 156 ------------------------------~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 156 ------------------------------RIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp ------------------------------CEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred ------------------------------eeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEE
Confidence 0111111 2223445566665668899999999 999999999999876
Q ss_pred cccchH------H-H-hhhCcE-eeccccchhHH
Q 002275 770 SGREGL------Q-A-ARAADY-SIGKFRFLKRL 794 (944)
Q Consensus 770 ~gn~~~------~-~-k~~Ad~-v~~~~~~l~~l 794 (944)
-..+.. + . ...+|+ ++.+...+..+
T Consensus 206 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 239 (251)
T 2pke_A 206 TPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAA 239 (251)
T ss_dssp CCCC-------------CCTTEEECSSGGGHHHH
T ss_pred ECCCCccccccccccccCCCCeeeeCCHHHHHHH
Confidence 322211 1 2 235787 88887766544
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00043 Score=72.24 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=36.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~ia~~~gi~ 653 (944)
.+.+.+.++++.+++.|++++++| ||+...+.....++|+.
T Consensus 32 ~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 32 TAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp EECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 377889999999999999999999 99998888888888774
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00012 Score=74.77 Aligned_cols=121 Identities=8% Similarity=0.024 Sum_probs=79.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.++++.|++ |+++.++|+.+...+......++- .- . .++
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--~f-d-~i~------------------------------ 143 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--EF-D-HII------------------------------ 143 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS--CC-S-EEE------------------------------
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC--cc-C-EEE------------------------------
Confidence 678999999999999 899999999988777666555331 10 0 010
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHH---HHHHhhcCCeEEEecCCc-cchhhhhhcCeeEE
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL---VELLKSCDYRTLAIGDGG-NDVRMIQKADIGVG 768 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i---v~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIa 768 (944)
.+.. +. .. .-.|.-...+ ++.++...+++++|||+. ||+.|.+.||++++
T Consensus 144 -----~~~~--------------~~-~~------KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (240)
T 3smv_A 144 -----TAQD--------------VG-SY------KPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197 (240)
T ss_dssp -----EHHH--------------HT-SC------TTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEE
T ss_pred -----Eccc--------------cC-CC------CCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEE
Confidence 0000 00 00 0022222344 444444567899999996 99999999999999
Q ss_pred ecccch----------HHH-hhhCcEeeccccchhHHH
Q 002275 769 ISGREG----------LQA-ARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 769 m~gn~~----------~~~-k~~Ad~v~~~~~~l~~l~ 795 (944)
| .+.. ... +..||+++.+...+..++
T Consensus 198 ~-~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 198 W-IYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp E-ECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred E-EcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 8 3322 223 358999999877765543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00049 Score=72.05 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=38.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~ia~~~gi~ 653 (944)
+++.+++.++|++|+++|++++++| ||+........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6688999999999999999999999 88888888888888874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00034 Score=73.08 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=36.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFISP 655 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~ia~~~gi~~~ 655 (944)
..+ ++++++|++++++|++++++| ||+.........++|+...
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 345 899999999999999999999 7888888888888888543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.39 E-value=5.1e-05 Score=78.21 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=39.3
Q ss_pred HHHHhhcCCeEEEecCC-ccchhhhhhcCeeEEe--cccch-HHHh---hhCcEeeccccch
Q 002275 737 VELLKSCDYRTLAIGDG-GNDVRMIQKADIGVGI--SGREG-LQAA---RAADYSIGKFRFL 791 (944)
Q Consensus 737 v~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIam--~gn~~-~~~k---~~Ad~v~~~~~~l 791 (944)
.+.++...+++++|||+ .||++|++.||+++++ .|+.. ++++ ..||+++.+...+
T Consensus 186 ~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 186 LNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp HHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred HHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 33444346789999999 7999999999999654 25443 3444 3689999876544
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.38 E-value=5e-05 Score=76.23 Aligned_cols=106 Identities=12% Similarity=0.056 Sum_probs=69.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH------cCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS------CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (944)
++.|++.+.++.|++ |++++++|+.+...+..+... .|+...-.. ++
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~--~~------------------------ 141 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDK--VY------------------------ 141 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSE--EE------------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCe--EE------------------------
Confidence 567899999999999 999999999988777666655 454211100 00
Q ss_pred cCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee
Q 002275 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 687 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
.+.. .. .. .-.|+--..+++.++...+++++|||+.||++|.+.||++
T Consensus 142 -----------~~~~--------------~~-~~------Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~ 189 (211)
T 2i6x_A 142 -----------ASCQ--------------MG-KY------KPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFH 189 (211)
T ss_dssp -----------EHHH--------------HT-CC------TTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCE
T ss_pred -----------eecc--------------cC-CC------CCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCE
Confidence 0000 00 00 0012223345566655567899999999999999999999
Q ss_pred EEecccchHHHh
Q 002275 767 VGISGREGLQAA 778 (944)
Q Consensus 767 Iam~gn~~~~~k 778 (944)
+++ .+.+.+++
T Consensus 190 ~~~-~~~~~~~~ 200 (211)
T 2i6x_A 190 TYC-PDNGENWI 200 (211)
T ss_dssp EEC-CCTTCCCH
T ss_pred EEE-ECCHHHHH
Confidence 998 66654443
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00089 Score=65.81 Aligned_cols=129 Identities=11% Similarity=0.099 Sum_probs=82.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh---hhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQ---NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (944)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+...-+. ++ ..+...
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~--i~-~~~~~~-------------------- 90 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDF--IY-ASNSEL-------------------- 90 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEE--EE-ECCTTS--------------------
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEE--EE-Eccccc--------------------
Confidence 6889999999999999999999999876 778888888887432100 00 000000
Q ss_pred CCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCC-ccchhhhhhcCeeEE
Q 002275 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVG 768 (944)
Q Consensus 690 ~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIa 768 (944)
.......-.|.--..+++.++...+.+++|||+ .+|+.+-+.||+...
T Consensus 91 -------------------------------~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 91 -------------------------------QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp -------------------------------STTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred -------------------------------cccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 000000001222334556665556789999999 799999999999754
Q ss_pred ecccchH-----HHhh-hCcEeec--cccchhHHH
Q 002275 769 ISGREGL-----QAAR-AADYSIG--KFRFLKRLI 795 (944)
Q Consensus 769 m~gn~~~-----~~k~-~Ad~v~~--~~~~l~~l~ 795 (944)
.-.+... .... .+|+++. +...+..++
T Consensus 140 ~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 140 WLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp EECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred EECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 3233221 1122 6789988 766666654
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00012 Score=74.06 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=34.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCCh---------------hhHHHHHHHcCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQ---------------NTAIQIALSCNF 652 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~---------------~~a~~ia~~~gi 652 (944)
.++.|++.++|++|+++|++++++|+++. ..+....+.+|+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999987 455556666665
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00032 Score=71.24 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=44.8
Q ss_pred HHHHHHHhhcCCeEEEecCCc-cchhhhhhcCeeEEeccc--chHHHhhhCcEeeccccchhHHH
Q 002275 734 AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISGR--EGLQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIam~gn--~~~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
..+++.++...+++++|||+. ||+.|.+.||+++++-.. ...+....+|+++.+...+..++
T Consensus 162 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 162 LEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred HHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 345555555567899999997 999999999999877222 11112457899999988776553
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00021 Score=70.88 Aligned_cols=98 Identities=9% Similarity=0.034 Sum_probs=68.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|+++| +++++|+.+...+......+|+...-.. ++.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~--~~~----------------------------- 133 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLA--FFT----------------------------- 133 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSC--EEE-----------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcce--EEe-----------------------------
Confidence 46789999999999999 9999999998888888888886432111 110
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
+.. .. .. .-.|+--..+++.++...+.+++|||+.||++|.+.||+.+.+
T Consensus 134 ------~~~--------------~~-~~------Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~ 183 (200)
T 3cnh_A 134 ------SSA--------------LG-VM------KPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQ 183 (200)
T ss_dssp ------HHH--------------HS-CC------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred ------ecc--------------cC-CC------CCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEE
Confidence 000 00 00 0012223345566655567899999999999999999999887
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00079 Score=70.06 Aligned_cols=122 Identities=21% Similarity=0.228 Sum_probs=80.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.++++.|++ |+++.++|+.+...+......+|+...-+. ++.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~--i~~----------------------------- 168 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA--IVI----------------------------- 168 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE--EEE-----------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhhe--EEe-----------------------------
Confidence 577999999999998 599999999998888888888887432110 000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCC-ccchhhhhhcCe--eEEe
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADI--GVGI 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~v--gIam 769 (944)
+.. .. ...-.|+--..+++.++-..+.+++|||+ .||+.+-+.||+ +|++
T Consensus 169 ------~~~--------------------~~-~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v 221 (260)
T 2gfh_A 169 ------GGE--------------------QK-EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWI 221 (260)
T ss_dssp ------GGG--------------------SS-SCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEE
T ss_pred ------cCC--------------------CC-CCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEE
Confidence 000 00 00001222234555555556789999995 999999999999 6777
Q ss_pred cccchHH---HhhhCcEeeccccchhHH
Q 002275 770 SGREGLQ---AARAADYSIGKFRFLKRL 794 (944)
Q Consensus 770 ~gn~~~~---~k~~Ad~v~~~~~~l~~l 794 (944)
+..... ....+|+++.+...+..+
T Consensus 222 -~~~~~~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 222 -NKSGRVPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp -CTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred -cCCCCCcCcccCCCCEEECCHHHHHHH
Confidence 333211 233689998887666544
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0011 Score=66.59 Aligned_cols=115 Identities=17% Similarity=0.183 Sum_probs=76.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.++++.|++.|+++.++|+.+...+....+.+|+...-+. ++
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~--~~------------------------------ 131 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV--MV------------------------------ 131 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EE------------------------------
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccc--cc------------------------------
Confidence 4679999999999999999999999999999999999987433110 00
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-E-Eec
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-V-GIS 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-I-am~ 770 (944)
.+.. .....-.|+-=..+++.++-..+++++|||+.+|+.+=+.||+. | ++.
T Consensus 132 -----~~~~---------------------~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~ 185 (216)
T 3kbb_A 132 -----FGDQ---------------------VKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVV 185 (216)
T ss_dssp -----CGGG---------------------SSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEEC
T ss_pred -----cccc---------------------cCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEec
Confidence 0000 00000022223456666666678899999999999999999985 3 231
Q ss_pred -c-cchHHHhhh-CcEee
Q 002275 771 -G-REGLQAARA-ADYSI 785 (944)
Q Consensus 771 -g-n~~~~~k~~-Ad~v~ 785 (944)
| +..+...++ ++.+.
T Consensus 186 ~g~~~~~~l~~~~~~~i~ 203 (216)
T 3kbb_A 186 HSLNDGKALLEAGAVALV 203 (216)
T ss_dssp CSSSCCHHHHHTTCSEEE
T ss_pred CCCCCHHHHHhCCCcEEC
Confidence 2 334445554 45544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0039 Score=66.45 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=36.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 653 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~ia~~~gi~ 653 (944)
.+++-+++.+++++|+++|++++++| ||+........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 46778899999999999999999999 57777776777778874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.96 E-value=7.2e-05 Score=74.66 Aligned_cols=44 Identities=7% Similarity=0.066 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHh
Q 002275 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k 778 (944)
..+++.++...+.+++|||+.||+.|.+.||+...+ .+.+..++
T Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~-~~~~~~~~ 198 (206)
T 2b0c_A 155 QHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSIL-VKDKTTIP 198 (206)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEE-CCSTTHHH
T ss_pred HHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEE-ecCCchHH
Confidence 455666665667899999999999999999999887 55554443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00018 Score=66.34 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=35.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
.++.|++.++++.|+++|++++++|+++...+....+.+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 356788999999999999999999999988877777777653
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00043 Score=70.40 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=69.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH------cCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS------CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (944)
++.|++.++++.|++. +++.++|+.+...+..+... .|+...-+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~---------------------------- 162 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK---------------------------- 162 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSE----------------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCE----------------------------
Confidence 4668999999999999 99999999998877766533 333110000
Q ss_pred cCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee
Q 002275 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 687 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
++.... . ....-.|.--..+++.++...+.+++|||+.||+.|.+.||++
T Consensus 163 ---------i~~~~~--------------~-------~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~ 212 (229)
T 4dcc_A 163 ---------TYLSYE--------------M-------KMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGIS 212 (229)
T ss_dssp ---------EEEHHH--------------H-------TCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCE
T ss_pred ---------EEeecc--------------c-------CCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCE
Confidence 000000 0 0000012223455666665678899999999999999999999
Q ss_pred EEecccchHHHhh
Q 002275 767 VGISGREGLQAAR 779 (944)
Q Consensus 767 Iam~gn~~~~~k~ 779 (944)
+++ .+.+..+++
T Consensus 213 ~i~-v~~~~~~k~ 224 (229)
T 4dcc_A 213 TYT-PKAGEDWSH 224 (229)
T ss_dssp EEC-CCTTCCGGG
T ss_pred EEE-ECCHHHHHH
Confidence 988 666555443
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0049 Score=60.79 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=30.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia 647 (944)
++.|++.++++.|+++|+++.++||.....+....
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999999887764443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0026 Score=64.85 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=63.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcc
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (944)
+.++.|++.+.++.|+++|++++++|||+.. .+..-.+.+|+......
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~---------------------------- 150 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK---------------------------- 150 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT----------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc----------------------------
Confidence 4688999999999999999999999999764 56666777787432110
Q ss_pred cCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc-CCeEEEecCCccchhh
Q 002275 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRM 759 (944)
Q Consensus 687 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~m 759 (944)
.++.+-....|....+.+.+. -..++++||..+|+++
T Consensus 151 ------------------------------------~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 151 ------------------------------------TLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ------------------------------------TEEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ------------------------------------eeEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 122222335677777777774 4568999999999987
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.024 Score=54.83 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=38.3
Q ss_pred EEecCchhhcccccccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhc
Q 002275 521 LLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (944)
Q Consensus 521 l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 600 (944)
.+.-|+.+.|.+... ..++.+.+.+.++..+|..++.+| .
T Consensus 133 ~v~iGn~~~m~~~gi--~i~~~~~~~~~~~~~~G~T~V~va--------------------------------------i 172 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL--VINNDVNDFMTEHERKGRTAVLVA--------------------------------------V 172 (185)
T ss_dssp EEEEECHHHHHHHTC--CCCHHHHHHHHHHHHTTCEEEEEE--------------------------------------E
T ss_pred EEEECCHHHHHHcCC--CCCHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 455688877654211 122345666788889999999999 5
Q ss_pred cceEeeEeccccc
Q 002275 601 DLKVLGVTAIEDR 613 (944)
Q Consensus 601 ~l~~lG~i~~~d~ 613 (944)
|..++|++++.|+
T Consensus 173 dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 DDELCGLIAIADT 185 (185)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCEEEEEEEEEcC
Confidence 7789999999985
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0037 Score=64.46 Aligned_cols=118 Identities=15% Similarity=0.191 Sum_probs=79.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.|++.+.++.|++.|+++.+.|+.. .+....+.+|+...-+. +
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i------------------------------ 160 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--I------------------------------ 160 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--E------------------------------
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--e------------------------------
Confidence 4678999999999999999999888764 35566777787433110 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEEec
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGIS 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam~ 770 (944)
+++.. .....-.|+-=..+++.++-..+++++|||+.+|+.+=+.||+ .|++
T Consensus 161 -----~~~~~---------------------~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v- 213 (250)
T 4gib_A 161 -----ADAGK---------------------CKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGV- 213 (250)
T ss_dssp -----CCGGG---------------------CCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE-
T ss_pred -----ecccc---------------------cCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEE-
Confidence 00000 0000002333345667776667889999999999999999998 4677
Q ss_pred ccchHHHhhhCcEeeccccchh
Q 002275 771 GREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 771 gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
++.. -...||+++.+.+.+.
T Consensus 214 ~~~~--~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 214 GNYE--NLKKANLVVDSTNQLK 233 (250)
T ss_dssp SCTT--TTTTSSEEESSGGGCC
T ss_pred CChh--HhccCCEEECChHhCC
Confidence 4432 2346899999877763
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0055 Score=66.87 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~ 654 (944)
++.|++.++++.|+++|+++.++|+.+...+......+|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567799999999999999999999999999988888888753
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0038 Score=63.80 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=36.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFI 653 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~----~a~~ia~~~gi~ 653 (944)
+.++.|++.+.++.|+++|++++++|||+.. .+..-.+.+|+.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5788999999999999999999999999764 555666777874
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.014 Score=59.02 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=36.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
-++.|++.+.++.|+++| ++.++|+.+...+....+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 468899999999999999 9999999998888888888876
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0018 Score=62.68 Aligned_cols=40 Identities=30% Similarity=0.383 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC---------------ChhhHHHHHHHcCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGD---------------KQNTAIQIALSCNF 652 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd---------------~~~~a~~ia~~~gi 652 (944)
++.|++.++|+.|+++|++++++|+. ....+..+.+.+|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 67899999999999999999999998 34455566666665
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.76 E-value=0.037 Score=56.86 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=31.5
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 653 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~ia~~~gi~ 653 (944)
.++.-+++.++++.++++|++++++| |++..........+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45566889999999999999999999 55555555555666764
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.013 Score=60.40 Aligned_cols=43 Identities=14% Similarity=0.214 Sum_probs=34.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhh---HHHHHHHcCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~ia~~~gi~ 653 (944)
+.++.|++.++|+.|+++|++++++||++... +......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35788999999999999999999999999543 44445666774
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.027 Score=56.36 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++.|++.+.++.|+++|++++++|+.+. .+......+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 6789999999999999999999999866 467777777763
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.029 Score=59.42 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=64.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhH---HHHHHH--------cCCCCCCCCCeEEEecCCCHHHHHHHHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTA---IQIALS--------CNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (944)
++++.|++.++++.|+++|+++.++||++...+ ...... .|+ .. . .+...+..
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~-~~-~---~~~~~~~~----------- 249 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV-PL-V---MQCQREQG----------- 249 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC-CC-S---EEEECCTT-----------
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC-Cc-h---heeeccCC-----------
Confidence 467789999999999999999999999986532 333444 576 11 1 11111100
Q ss_pred HHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCC-eEEEecCCccchh
Q 002275 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDY-RTLAIGDGGNDVR 758 (944)
Q Consensus 680 ~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~ 758 (944)
. .+-.|.-|..+++.+..... .+++|||..+|+.
T Consensus 250 -------------------------------------------~--~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~ 284 (301)
T 1ltq_A 250 -------------------------------------------D--TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVE 284 (301)
T ss_dssp -------------------------------------------C--CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHH
T ss_pred -------------------------------------------C--CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHH
Confidence 0 01124457777777754443 4689999999999
Q ss_pred hhhhcCeeE
Q 002275 759 MIQKADIGV 767 (944)
Q Consensus 759 ml~~A~vgI 767 (944)
|-+.||+-.
T Consensus 285 ~a~~aG~~~ 293 (301)
T 1ltq_A 285 MWRRIGVEC 293 (301)
T ss_dssp HHHHTTCCE
T ss_pred HHHHcCCeE
Confidence 999999864
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.024 Score=60.40 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=36.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~ 650 (944)
...+.++.++.++.++++|++++|+||-+...+..+|..+
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 3468889999999999999999999999999999999875
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.62 E-value=0.04 Score=56.93 Aligned_cols=120 Identities=14% Similarity=0.198 Sum_probs=75.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc---CCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC---NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (944)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+...-+. +
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~--i--------------------------- 179 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG--H--------------------------- 179 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE--E---------------------------
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE--E---------------------------
Confidence 468899999999999999999999999887777766643 34221100 0
Q ss_pred CCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-
Q 002275 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV- 767 (944)
Q Consensus 689 ~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI- 767 (944)
++. .+...-.|.-=..+++.++-..+.+++|||+.+|+.+=+.||+-.
T Consensus 180 --------~~~-----------------------~~~~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i 228 (261)
T 1yns_A 180 --------FDT-----------------------KIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVA 228 (261)
T ss_dssp --------ECG-----------------------GGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred --------Eec-----------------------CCCCCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 000 000000122223455666656678999999999999999999864
Q ss_pred Eec--ccch-HHHhhhCcEeeccccch
Q 002275 768 GIS--GREG-LQAARAADYSIGKFRFL 791 (944)
Q Consensus 768 am~--gn~~-~~~k~~Ad~v~~~~~~l 791 (944)
.+. +... +.....+|+++.+...+
T Consensus 229 ~v~~~~~~~~~~~~~~~~~~i~~l~el 255 (261)
T 1yns_A 229 VVVRPGNAGLTDDEKTYYSLITSFSEL 255 (261)
T ss_dssp EECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred EEeCCCCCcccccccCCCEEECCHHHh
Confidence 441 1111 11223578887765543
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.58 E-value=0.07 Score=55.08 Aligned_cols=42 Identities=12% Similarity=0.195 Sum_probs=34.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH----cCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS----CNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~----~gi~ 653 (944)
++.-+++.++++.+++.|+++.++||+...+...++.. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 44446888999999999999999999998887776664 7774
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.52 E-value=0.06 Score=54.87 Aligned_cols=114 Identities=15% Similarity=0.087 Sum_probs=73.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.|++.+.++.|+++|+++.++|+... +..+...+|+...-+. +
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~--i------------------------------ 139 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTF--C------------------------------ 139 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSE--E------------------------------
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccc--c------------------------------
Confidence 36789999999999999999999998653 4556677777432110 0
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-EEec
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~ 770 (944)
+.+.. .....=.|+-=..+++.++-..+++++|||+.+|+.+=+.||+- |++
T Consensus 140 -----~~~~~---------------------~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V- 192 (243)
T 4g9b_A 140 -----ADASQ---------------------LKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGI- 192 (243)
T ss_dssp -----CCGGG---------------------CSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEE-
T ss_pred -----ccccc---------------------ccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEE-
Confidence 00000 00000022223456666666678899999999999999999975 455
Q ss_pred ccchHHHhhhCcEeeccccc
Q 002275 771 GREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 771 gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+.+. ..||.++.+...
T Consensus 193 ~~g~----~~ad~~~~~~~~ 208 (243)
T 4g9b_A 193 GAGL----TGAQLLLPSTES 208 (243)
T ss_dssp STTC----CSCSEEESSGGG
T ss_pred CCCC----CcHHHhcCChhh
Confidence 3332 246777665443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.044 Score=50.26 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=34.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCCC
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFI 653 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~---~~~a~~ia~~~gi~ 653 (944)
+.+++.++|++|+++|++++++|||+ ...+...+.+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45799999999999999999999998 55667777788874
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.95 E-value=1 Score=46.15 Aligned_cols=43 Identities=30% Similarity=0.334 Sum_probs=35.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH---cCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNFI 653 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~---~gi~ 653 (944)
.+..-+++.+++++++++|++++++|||+..+...+++. +|+.
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344458999999999999999999999998887777665 4663
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.28 E-value=0.024 Score=56.48 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=25.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQNT 642 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~ 642 (944)
+.+++.+.++.|+++|+++.++||++...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 45688999999999999999999997543
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=91.10 E-value=2.1 Score=40.20 Aligned_cols=52 Identities=19% Similarity=0.166 Sum_probs=35.8
Q ss_pred EEecCchhhcccccccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhc
Q 002275 521 LLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (944)
Q Consensus 521 l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 600 (944)
.+.-|+++.|.+... ..+..+...+..+..+|..++.+| .
T Consensus 114 ~v~iGn~~~m~~~gi--~~~~~~~~~~~~~~~~G~T~v~va--------------------------------------~ 153 (165)
T 2arf_A 114 SVLIGNREWLRRNGL--TISSDVSDAMTDHEMKGQTAILVA--------------------------------------I 153 (165)
T ss_dssp EEEEECHHHHHHHHC--SSCHHHHHHHHHHHTTTSEEEEEE--------------------------------------E
T ss_pred EEEEcCHHHHHhcCC--CCCHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 344588776643211 112345566777888999999999 5
Q ss_pred cceEeeEecccc
Q 002275 601 DLKVLGVTAIED 612 (944)
Q Consensus 601 ~l~~lG~i~~~d 612 (944)
|..++|++++.|
T Consensus 154 dg~~~g~i~l~D 165 (165)
T 2arf_A 154 DGVLCGMIAIAD 165 (165)
T ss_dssp TTEEEEEEEECC
T ss_pred CCEEEEEEEEEC
Confidence 778999999987
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=90.45 E-value=0.41 Score=54.89 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=29.5
Q ss_pred HHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe
Q 002275 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (944)
..+++.++-..+++++|||+.||+.+-+.||+....
T Consensus 167 ~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 167 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 445666665677899999999999999999998755
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=90.01 E-value=0.28 Score=54.36 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=24.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCC
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDK 639 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (944)
+-|++.++|+.|+++|++++++|+.+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999966
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=89.84 E-value=0.041 Score=53.84 Aligned_cols=40 Identities=5% Similarity=0.024 Sum_probs=33.1
Q ss_pred cccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcC
Q 002275 612 DRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCN 651 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~~~g 651 (944)
-++.|++.++++.|+++ |+++.++|+.+...+......+|
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~g 112 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYR 112 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhC
Confidence 46789999999999999 99999999998766655555444
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=86.32 E-value=0.067 Score=52.50 Aligned_cols=41 Identities=7% Similarity=0.018 Sum_probs=33.1
Q ss_pred cccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCC
Q 002275 612 DRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNF 652 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~ia~~~gi 652 (944)
-++.|++.+.++.|+++ |+++.++|+.+...+......+|+
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 36789999999999999 999999999987665555544443
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=83.92 E-value=1 Score=45.92 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=27.7
Q ss_pred HHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE
Q 002275 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
..+++.++-..+++++|||+.+|+.+=+.||+-.
T Consensus 194 ~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 194 ANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 4456666666678999999999999999999864
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.88 E-value=0.39 Score=46.77 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=37.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
-.+||++.+.++.|++. ++++++|.-....|..+...+++.
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 46899999999999998 999999999999999999998863
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=82.73 E-value=0.61 Score=41.74 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=26.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~ 642 (944)
++.+++.+++++++++|++++++|||+...
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 466789999999999999999999998754
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=80.28 E-value=0.54 Score=45.18 Aligned_cols=41 Identities=12% Similarity=-0.004 Sum_probs=37.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
=.+||++.+.++.+++. +++++.|.-....|..+...++..
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 46899999999999998 999999999999999999988863
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 944 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 7e-26 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-22 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 8e-16 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 3e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 3e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.001 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.002 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 0.002 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 0.003 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 108 bits (270), Expect = 7e-26
Identities = 53/447 (11%), Positives = 107/447 (23%), Gaps = 106/447 (23%)
Query: 363 ATNTAISEDLAQVEY------ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGL 416
+ + E L Y I + + R IF ++ + LK
Sbjct: 21 VSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNR------IFQKDKILNKLK---- 70
Query: 417 LNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476
+ G L ++ + + IL K + EA ++
Sbjct: 71 ----SLGLNSNWDMLFIVFSIHLI--------DILKKLSHDEIEAFMYQDE--------- 109
Query: 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA 536
+E+K L + + V + + L + A + +
Sbjct: 110 ---PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN-NIYAALEEFATTELHV---S 162
Query: 537 GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 596
+ A+ +Q + L + E+ E + FK +
Sbjct: 163 DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPV----- 217
Query: 597 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656
D V + L+ AG + TG + + +
Sbjct: 218 -------------------DEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYF 258
Query: 657 PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716
+ + V++ + + K
Sbjct: 259 EADFIATASD-----------------------------VLEAENMYPQARPLGKPNPF- 288
Query: 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD---IGV--GISG 771
+ + +GD D+ QK IG G+ G
Sbjct: 289 -SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKG 347
Query: 772 REGLQ--AARAADYSIGKFRFLKRLIL 796
++ A ADY I L+ ++
Sbjct: 348 KDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 94.2 bits (233), Expect = 4e-22
Identities = 47/252 (18%), Positives = 77/252 (30%), Gaps = 42/252 (16%)
Query: 380 TDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNT 439
DK + F I G Y E G+ LK+ + + ++ T+ A+CN
Sbjct: 9 IDKVDGDFCSLNEFS---ITGSTYAPE-GEVLKNDKPIRS--GQFDGLVELATICALCND 62
Query: 440 VIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVL----QYEIL 495
++ + K E AL ++++ + N +
Sbjct: 63 SSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 122
Query: 496 ETLEFTSDRKRMSVVVK----DCHSGNISLLSKGADEAILP---YAHAGQQTRTFVEAVE 548
TLEF+ DRK MSV + + KGA E ++ Y G V+
Sbjct: 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 182
Query: 549 Q----------YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
+ + LR L LA R+ +
Sbjct: 183 EKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFME---------------Y 227
Query: 599 EHDLKVLGVTAI 610
E DL +GV +
Sbjct: 228 ETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 75.3 bits (184), Expect = 8e-16
Identities = 28/204 (13%), Positives = 57/204 (27%), Gaps = 41/204 (20%)
Query: 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQ---SQDEEALVHAAAQLHMVLVNKNASI 480
SP + +CN + + + K E AL+ S+
Sbjct: 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG-------SV 83
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD-CHSGNISLLSKGADEAILPYA----- 534
+++ + + + F S K + + + + L+ KGA E IL
Sbjct: 84 RKMRD-----RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV 138
Query: 535 ------HAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDRE 588
+ F A + LG R L + ++ + +
Sbjct: 139 QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNF----- 193
Query: 589 WRIAEVCQRLEHDLKVLGVTAIED 612
L +G+ ++ D
Sbjct: 194 ---------PTEKLCFVGLMSMID 208
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 66.3 bits (161), Expect = 3e-13
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 41/191 (21%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
D T D + V +I+ R AGI M+TGD + TAI I +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
+ G+ D++ + +R
Sbjct: 68 DRAYTGREFDDLPLAEQREACRR------------------------------------- 90
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR- 779
RV PS K+++VE L+S D T GDG ND ++KA+IG+ + G A+
Sbjct: 91 -ACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGS--GTAVAKT 147
Query: 780 AADYSIGKFRF 790
A++ + F
Sbjct: 148 ASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.2 bits (111), Expect = 3e-06
Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 3/96 (3%)
Query: 699 GWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL--KSCDYRTLAIGDGGND 756
+ K + K ++++LL K + + IGDG D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 757 VRMIQKADIGVGISGREGL-QAARAADYSIGKFRFL 791
+ AD +G G Q A + I F L
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 46.5 bits (109), Expect = 5e-06
Identities = 26/192 (13%), Positives = 56/192 (29%), Gaps = 21/192 (10%)
Query: 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED 670
+ + E I GI ++TG+ A ++ P +I K +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 671 EVCRS-----------LERVLLTMRITTSEPKDVAFVVDGWALEI-ALKHYRKAFTELAI 718
S +R T + V+ + + ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-G 771
+ V + + K+ ++ +GDG ND+ + V ++
Sbjct: 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA 196
Query: 772 REGLQAARAADY 783
+ L+ ADY
Sbjct: 197 PKILKE--NADY 206
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 44.7 bits (105), Expect = 5e-06
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQN 641
D D L++ ++ L++ GI M+TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 43.4 bits (101), Expect = 5e-05
Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 25/210 (11%)
Query: 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---EPKGQLLSIDGK 667
+ + E+I + K G+ +L+G+ + + P E G + DG
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 668 TEDEVCRSLERVLLT-------MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
+ L MR + A E ++A + ++
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 137
Query: 721 RTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GRE 773
+ + + + + K + L IGD ND+ M Q + +
Sbjct: 138 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD 197
Query: 774 GLQAARAADYSI------GKFRFLKRLILV 797
++A +D+ + K L+
Sbjct: 198 NIKA--VSDFVSDYSYGEEIGQIFKHFELM 225
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.0 bits (95), Expect = 3e-04
Identities = 23/110 (20%), Positives = 35/110 (31%)
Query: 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 754
++ E+ R K Q V KS YR +A GD
Sbjct: 96 EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155
Query: 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYN 804
ND M+ +A G+ E + ++ + LKR L S +
Sbjct: 156 NDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLS 205
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 39.5 bits (91), Expect = 0.001
Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 25/204 (12%)
Query: 615 QDGVPETIETLRKAGINFWMLTGD-----KQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669
+ + + L + + TG + + F S P+ L + E
Sbjct: 84 KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAE 143
Query: 670 DEVCRSLERVLLTMR--ITTSEPKDVAFVVDGWALEIALKHYRKAFT---ELAILSRTAI 724
+ +S + + + EP D ++ + L+ K + +L ++S
Sbjct: 144 VQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEH 203
Query: 725 CCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GREGLQA 777
++ + ++ L + T A+GD ND M++ A GV + RE +++
Sbjct: 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKS 263
Query: 778 ARAADYSI------GKFRFLKRLI 795
AD G +K L+
Sbjct: 264 --IADAVTLTNDEHGVAHMMKHLL 285
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (88), Expect = 0.002
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISG 771
TL +GDG ND +++ D V + G
Sbjct: 205 TTLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 38.2 bits (87), Expect = 0.002
Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 4/171 (2%)
Query: 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV--CR 674
GV E ++ + K + + + + E + ++ E+ + +
Sbjct: 29 GVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELK 88
Query: 675 SLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA 734
+ V+ + + G A + K + +
Sbjct: 89 NRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILE 148
Query: 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
++ ++ T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 149 KIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 197
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 37.7 bits (86), Expect = 0.003
Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 724 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAAD 782
C K ++ L + + IGD DV + +D+ +
Sbjct: 141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNH 200
Query: 783 YSIGKFRFLKRLI 795
F +++ I
Sbjct: 201 LPYQDFYEIRKEI 213
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 944 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.91 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.89 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.89 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.86 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.81 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.44 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.42 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.41 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.4 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.33 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.31 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.3 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.3 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.3 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.19 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.11 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.1 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.04 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.02 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.99 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.76 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.74 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.71 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.64 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.57 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.25 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.54 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.52 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.42 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.28 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.0 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.98 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.98 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.82 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.78 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.77 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.74 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.68 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.58 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.49 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.26 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.14 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.06 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.76 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.45 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.42 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.33 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.07 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.87 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.79 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.7 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 93.59 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 90.26 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 90.03 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 89.69 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 88.75 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=4.6e-25 Score=210.42 Aligned_cols=154 Identities=28% Similarity=0.352 Sum_probs=118.9
Q ss_pred EeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcc
Q 002275 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (944)
Q Consensus 607 ~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (944)
.+..-||+|++++++|+.||++||++||+|||+..+|..+|+++||..++......
T Consensus 14 ~~~~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~------------------------ 69 (168)
T d1wpga2 14 TTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR------------------------ 69 (168)
T ss_dssp BCCCECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTT------------------------
T ss_pred EEEecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccc------------------------
Confidence 33334999999999999999999999999999999999999999998765431000
Q ss_pred cCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee
Q 002275 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 687 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
..++..+........+. ...+..+|+|++|++|..+++.+++.|+.|+|+|||.||++||+.||+|
T Consensus 70 ---------~~~~~~~~~~~~~~~~~-----~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvG 135 (168)
T d1wpga2 70 ---------AYTGREFDDLPLAEQRE-----ACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG 135 (168)
T ss_dssp ---------EEEHHHHHHSCHHHHHH-----HHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEE
T ss_pred ---------cccccccchhhHHHHhh-----hhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEE
Confidence 12222222111111111 1223678999999999999999999999999999999999999999999
Q ss_pred EEecccchHHHhhhCcEeeccccchhHH-Hhhhh
Q 002275 767 VGISGREGLQAARAADYSIGKFRFLKRL-ILVHG 799 (944)
Q Consensus 767 Iam~gn~~~~~k~~Ad~v~~~~~~l~~l-~l~~g 799 (944)
||| +++.+.++++||+++.++++...+ ++.||
T Consensus 136 Ia~-~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 136 IAM-GSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp EEE-TTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred EEe-ccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999 776676778999999987775544 34555
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.89 E-value=7.9e-24 Score=185.89 Aligned_cols=109 Identities=25% Similarity=0.324 Sum_probs=90.1
Q ss_pred EEEEEECCeE--EEEeeccCccccEEEEecCccccccEEEEeccCCCceEEEEeccccCCCCceeeeccccccCCCHhhh
Q 002275 102 EVWVVKQGIK--KLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179 (944)
Q Consensus 102 ~~~V~r~g~~--~~I~~~~lvvGDII~l~~G~~iPaD~ill~s~~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~ 179 (944)
.++|+|+|++ ++|++++|+|||||.|++||++||||+||... .+.+.||||+|||||.|+.|.+.+.
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~--~~~l~vdes~lTGEs~pv~K~~~~~--------- 70 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGESVSVIKHTEPV--------- 70 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCCEEECHHHHSCCSCEECCCSCC---------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEee--ccceEEEEeecccceEEEEeecccc---------
Confidence 5789999985 78999999999999999999999999999543 2448999999999999999964211
Q ss_pred ccceEEEEecCCCCccceeeEEEEeCCCCCCCCccccCcCceeeecceeecCceEEEEEEEecCCceeeccC
Q 002275 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (944)
Q Consensus 180 ~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~~~~g~~~~~~V~~tG~~T~~~~~~ 251 (944)
+ +......+..|++|+||.+.+| .++++|++||.+|.+|++.
T Consensus 71 -----------~------------------~~~~~~~~~~n~lf~GT~V~~G-~~~~~V~~tG~~T~~G~i~ 112 (115)
T d1wpga1 71 -----------P------------------DPRAVNQDKKNMLFSGTNIAAG-KALGIVATTGVSTEIGKIR 112 (115)
T ss_dssp -----------C------------------CTTCCGGGCTTEECTTCEEEEC-EEEEEEEECGGGSHHHHHH
T ss_pred -----------c------------------ccccccccccceEEeccEEEee-eEEEEEEEEccccHHHHHH
Confidence 0 1111222567899999999999 7999999999999999764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=4.9e-25 Score=221.62 Aligned_cols=197 Identities=15% Similarity=0.148 Sum_probs=135.1
Q ss_pred eEEEEEEEcCEeecCCCCCCCCchhhhhhhcCCChhHHHHHHHhhhcceecccccCCCc---eeeecCCccHHHHHHHHH
Q 002275 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAA 467 (944)
Q Consensus 391 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~---~~~~~~~p~e~all~~a~ 467 (944)
|+|+++|++++.+.......... ......++....++.++++||++....++++. -+...|+|+|.||+++|.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~ 77 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSG----ATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIE 77 (214)
T ss_dssp CEEEEEEETTEEEECCCC----------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHH
T ss_pred eEEEEEEECCEEEEcCCCCcCCC----cccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHH
Confidence 89999999998875432211110 11223567788899999999998876544321 112368999999999999
Q ss_pred hCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecC-CCcEEEEecCchhhccccccc----------
Q 002275 468 QLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH-SGNISLLSKGADEAILPYAHA---------- 536 (944)
Q Consensus 468 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~-~~~~~l~~KGa~e~i~~~~~~---------- 536 (944)
+.|.... ..+..++++..+||+|+||+|+++++... ++.+++|+|||||.|+++|+.
T Consensus 78 ~~~~~~~------------~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l 145 (214)
T d1q3ia_ 78 LSCGSVR------------KMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPL 145 (214)
T ss_dssp HHHSCHH------------HHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEEC
T ss_pred HhCCCHH------------HHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeec
Confidence 8765321 12334677899999999999999999754 356899999999999999972
Q ss_pred -CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccccccC
Q 002275 537 -GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 615 (944)
Q Consensus 537 -~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~lr 615 (944)
...++.+.+.+++|+.+|+|||++|||.++.+++..+.+. +. +..+..|+||+|+|++||+||+|
T Consensus 146 ~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~---------~~-----~~~~~~e~~L~flGlvgi~DPPR 211 (214)
T d1q3ia_ 146 DKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF---------DT-----DELNFPTEKLCFVGLMSMIDHHH 211 (214)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCC---------CT-----TTTSSCCSSEEEEEEEEEESCCS
T ss_pred hHHHHHHHHHHHHHHhhCCcEEEEEEEEecCcccccccccc---------Ch-----hhhhhhcCCCEEEEEEEEEeCCC
Confidence 1234678899999999999999999999987764432110 00 00134578999999999999999
Q ss_pred CC
Q 002275 616 DG 617 (944)
Q Consensus 616 ~~ 617 (944)
+.
T Consensus 212 ~~ 213 (214)
T d1q3ia_ 212 HH 213 (214)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=4.6e-23 Score=187.98 Aligned_cols=122 Identities=25% Similarity=0.339 Sum_probs=103.4
Q ss_pred ccceEeeEeccccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHH
Q 002275 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (944)
Q Consensus 600 ~~l~~lG~i~~~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (944)
-|.+..+.++++|++|++++++|+.|+++|+++||+|||+..++..+|+++||
T Consensus 8 ~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI--------------------------- 60 (135)
T d2b8ea1 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL--------------------------- 60 (135)
T ss_dssp EECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC---------------------------
T ss_pred ECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhh---------------------------
Confidence 35566678999999999999999999999999999999999999999999998
Q ss_pred HHHhhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhh
Q 002275 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (944)
Q Consensus 680 ~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~m 759 (944)
..++++++|++|..+++.++.. +.|+|+|||.||+||
T Consensus 61 ------------------------------------------~~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~a 97 (135)
T d2b8ea1 61 ------------------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPA 97 (135)
T ss_dssp ------------------------------------------SEEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHH
T ss_pred ------------------------------------------hhhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHH
Confidence 3467899999999999999865 589999999999999
Q ss_pred hhhcCeeEEecccchHHHhhhCcEeeccccchh
Q 002275 760 IQKADIGVGISGREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 760 l~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
|+.||+|||| +++.+.++++||+++.++++..
T Consensus 98 L~~Advgia~-~~~~~~~~~aADivl~~~~l~~ 129 (135)
T d2b8ea1 98 LAQADLGIAV-GSGSDVAVESGDIVLIRDDLRD 129 (135)
T ss_dssp HHHSSEEEEE-CCC--------SEEESSCCTHH
T ss_pred HHhCCeeeec-CccCHHHHHhCCEEEECCCHHH
Confidence 9999999999 7777777889999999876644
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.86 E-value=1.6e-26 Score=254.48 Aligned_cols=331 Identities=14% Similarity=0.032 Sum_probs=211.4
Q ss_pred cccccccceEEEEecCcCcccccceEEEEEEEcCEeecCCCCCCCCchhhhhhhc--CCChhHHHHHHHhhhcceecccc
Q 002275 367 AISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT--SGSPDVIRFLTVMAVCNTVIPAK 444 (944)
Q Consensus 367 ~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~c~~~~~~~ 444 (944)
.+.|.||..+++|+|||||+|.|.|.++.+. +...+.... .-+.+ -++....++|+.+....
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~---------------~~~il~~~k~~g~n~~-~dl~~~~~~~~~~~~~~ 94 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ---------------KDKILNKLKSLGLNSN-WDMLFIVFSIHLIDILK 94 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT---------------TTHHHHHHHHTTCCCH-HHHHHHHHHHHHHHHHT
T ss_pred hchhhcccceeeecCcccchhhhhheeeeec---------------chhhhHhhhhcCCChh-HHHHHHHHHHHHHHHHh
Confidence 3458999999999999999999999764321 111111110 11222 23455666677544322
Q ss_pred cCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEec
Q 002275 445 SKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSK 524 (944)
Q Consensus 445 ~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~K 524 (944)
..+++++.+++...+..+..+ ......+.....+||++.+++|++..... ++.+..+.+
T Consensus 95 --------~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~i~f~~~~k~~~~~~~~~-~~~~~~~~~ 153 (380)
T d1qyia_ 95 --------KLSHDEIEAFMYQDEPVELKL------------QNISTNLADCFNLNEQLPLQFLDNVKVGK-NNIYAALEE 153 (380)
T ss_dssp --------TSCHHHHHHHHHCSSCHHHHH------------TTSGGGCSSCCCCCTTTTHHHHTTCCSSH-HHHHHHHHH
T ss_pred --------hcCCCcHHHHHHHHhhccchH------------HHHHHhccccccCCcchHHHHHhhhcccc-cchhHhhhh
Confidence 135677777775543222111 01112233455789999999998765432 233455667
Q ss_pred CchhhcccccccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceE
Q 002275 525 GADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604 (944)
Q Consensus 525 Ga~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 604 (944)
|+++.+... .....++...+..++.+|+|++++|++..+..+ .....+...
T Consensus 154 ~a~~~~~~~---~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~--------------------------~~~~~~~~~ 204 (380)
T d1qyia_ 154 FATTELHVS---DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE--------------------------KKIARTTFK 204 (380)
T ss_dssp HHHHHTTCS---CCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH--------------------------CSCCSCSSC
T ss_pred ccHhhcCCc---HHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc--------------------------cccchhhHh
Confidence 777665432 223455667888999999999999965443221 122345567
Q ss_pred eeEeccccccCC--ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHH
Q 002275 605 LGVTAIEDRLQD--GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682 (944)
Q Consensus 605 lG~i~~~d~lr~--~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (944)
.|+++.+++++| +++++|+.|+++|++++|+|||+..+|..+++++|+...-....++ .+. +..... ..
T Consensus 205 ~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~--~~~---d~~~~~----~~ 275 (380)
T d1qyia_ 205 TGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA--TAS---DVLEAE----NM 275 (380)
T ss_dssp CCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE--CHH---HHHHHH----HH
T ss_pred cccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEE--ecc---hhhhhh----hh
Confidence 899999999776 9999999999999999999999999999999999996532211111 110 000000 00
Q ss_pred hhcccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhh
Q 002275 683 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK 762 (944)
Q Consensus 683 ~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~ 762 (944)
........+. +. .. ......+++.+|.+|..+++.++..++.|+|+|||.||++|.+.
T Consensus 276 ~~~~~~~~KP-----~p-----------~~------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~ 333 (380)
T d1qyia_ 276 YPQARPLGKP-----NP-----------FS------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK 333 (380)
T ss_dssp STTSCCCCTT-----ST-----------HH------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH
T ss_pred ccccccccCC-----Ch-----------HH------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHH
Confidence 0000000000 00 00 00122356788999999999999999999999999999999999
Q ss_pred cC---eeEEecccchHHHh----h-hCcEeeccccchhHHH
Q 002275 763 AD---IGVGISGREGLQAA----R-AADYSIGKFRFLKRLI 795 (944)
Q Consensus 763 A~---vgIam~gn~~~~~k----~-~Ad~v~~~~~~l~~l~ 795 (944)
|| +||+| |..+++++ + .||+++.+...+..++
T Consensus 334 Ag~~~Igv~~-G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 334 IGATFIGTLT-GLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp HTCEEEEESC-BTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCCCEEEEec-CCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 99 99999 76554332 2 6999999988776654
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=6.9e-21 Score=194.74 Aligned_cols=173 Identities=20% Similarity=0.210 Sum_probs=122.5
Q ss_pred CChhHHHHHHHhhhcceecccccCCCceeeecCCccHHHHHHHHHhCCeEEEeecCcEEEE----EECCeEEEEEEEEee
Q 002275 423 GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI----KFNGSVLQYEILETL 498 (944)
Q Consensus 423 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~p~e~all~~a~~~g~~~~~~~~~~~~~----~~~~~~~~~~~l~~~ 498 (944)
..+.+.+++.++++||++....++.+..+...++|+|.||+.++.+.|+.........-.. .....+..|+++..+
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 125 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEe
Confidence 4567888999999999988765554445566799999999999999886432211000000 000012468899999
Q ss_pred cCCCCCCeeEEEEEecCCC----cEEEEecCchhhcccccccC-----------CchhHHHHHHHHH--HhccceEEEEE
Q 002275 499 EFTSDRKRMSVVVKDCHSG----NISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQY--SQLGLRTLCLA 561 (944)
Q Consensus 499 ~f~s~~k~~sviv~~~~~~----~~~l~~KGa~e~i~~~~~~~-----------~~~~~~~~~~~~~--~~~G~rvl~~A 561 (944)
||+|+||||+|+++.++++ .+.+|+|||||.|+++|... ..++.+.+.++++ +.+|+|||++|
T Consensus 126 pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A 205 (239)
T d1wpga3 126 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205 (239)
T ss_dssp EEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEE
T ss_pred eecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEE
Confidence 9999999999999986533 37899999999999999731 1234566667765 67999999999
Q ss_pred EEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEecc
Q 002275 562 WREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAI 610 (944)
Q Consensus 562 ~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~ 610 (944)
||+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 206 ~k~~~~~~~~~~~----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 206 TRDTPPKREEMVL----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EESSCCCGGGCCT----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEECCcccccccc----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999865422110 000 012467899999999986
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=2.9e-13 Score=141.35 Aligned_cols=178 Identities=19% Similarity=0.225 Sum_probs=113.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCC-----CCeEEEe---------cCCCHHHHHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP-----KGQLLSI---------DGKTEDEVCRSL 676 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~-----~~~~~~~---------~~~~~~~~~~~~ 676 (944)
..++.+++.++|++|+++|++++++|||+...+..+.+++++..+.. +|..+.. .....+.... +
T Consensus 19 ~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~-i 97 (271)
T d1rkqa_ 19 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRF-L 97 (271)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHH-H
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHH-H
Confidence 34688899999999999999999999999999999999999876532 1222211 1111122111 1
Q ss_pred HHHHHHhhcc----------------------------------------cCCCCcEEEEEc-chhHHHHHHHHHHHHHh
Q 002275 677 ERVLLTMRIT----------------------------------------TSEPKDVAFVVD-GWALEIALKHYRKAFTE 715 (944)
Q Consensus 677 ~~~~~~~~~~----------------------------------------~~~~~~~~lv~~-~~~~~~~~~~~~~~~~~ 715 (944)
.......... ...........+ ........+.+.+.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (271)
T d1rkqa_ 98 EKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKE 177 (271)
T ss_dssp HHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhc
Confidence 1111110000 000111122222 22333333333333322
Q ss_pred -hhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccc
Q 002275 716 -LAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (944)
Q Consensus 716 -~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~ 788 (944)
+........+.++.|. +|+..++.+.+. .+++++||||.||++||+.|++|||| +|+.+++++.||+|+.++
T Consensus 178 ~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am-~na~~~lk~~a~~i~~~~ 256 (271)
T d1rkqa_ 178 KYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKSN 256 (271)
T ss_dssp HEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred ceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCCC
Confidence 2222334456788887 599999888764 45799999999999999999999999 999999999999999865
Q ss_pred cc
Q 002275 789 RF 790 (944)
Q Consensus 789 ~~ 790 (944)
+.
T Consensus 257 ~~ 258 (271)
T d1rkqa_ 257 LE 258 (271)
T ss_dssp TT
T ss_pred Cc
Confidence 54
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.42 E-value=6e-13 Score=139.99 Aligned_cols=69 Identities=23% Similarity=0.179 Sum_probs=59.2
Q ss_pred ceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 721 RTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 721 ~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+...+.+++|. +|+..++.+.+. .++|++||||.||++||+.|++|||| +|+.+++++.||+++.+.+.
T Consensus 200 s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam-~na~~~~k~~A~~v~~~~~~ 274 (285)
T d1nrwa_ 200 SAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTNDE 274 (285)
T ss_dssp SSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCGGG
T ss_pred eCCcEEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCCCCc
Confidence 34456788998 699988888764 46799999999999999999999999 99999999999999986543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=1.5e-13 Score=143.29 Aligned_cols=175 Identities=18% Similarity=0.220 Sum_probs=110.1
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC--CCCCeEEEecCC-------CHHHHHHHHHHHHHHhhc
Q 002275 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK-------TEDEVCRSLERVLLTMRI 685 (944)
Q Consensus 615 r~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 685 (944)
.+.+.++|++|+++|++++++|||+...+..+.+++++..+ ..+|..+...+. ...+....+.........
T Consensus 22 ~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 101 (269)
T d1rlma_ 22 QPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL 101 (269)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCTTC
T ss_pred hHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchHHHHHHHHHHHhhcCc
Confidence 36789999999999999999999999999998888876532 111223322221 222222222222211000
Q ss_pred c-------------------------------------cCCCC--cEEEEEcchhHHHHHHHHHHHHHh-hhhccceeEE
Q 002275 686 T-------------------------------------TSEPK--DVAFVVDGWALEIALKHYRKAFTE-LAILSRTAIC 725 (944)
Q Consensus 686 ~-------------------------------------~~~~~--~~~lv~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ 725 (944)
. ..... +..+...........+.+...+.. .........+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (269)
T d1rlma_ 102 NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGF 181 (269)
T ss_dssp EEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECSTTE
T ss_pred eEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHHHHHHHHHHhhcceEEEEEcCce
Confidence 0 00000 111122222333333333333222 1122233456
Q ss_pred EEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 726 CRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 726 ~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
.+++|. +|+..++.|.+. .++|++||||.||++||+.|++|||| +|+.+++|+.|++|+.+++.
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam-~Na~~~lk~~A~~v~~~~~~ 251 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDNNH 251 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCGGG
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCCCCc
Confidence 789997 599988888663 46799999999999999999999999 99999999999999986554
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.40 E-value=4.8e-13 Score=135.72 Aligned_cols=176 Identities=15% Similarity=0.167 Sum_probs=107.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC--CCCeEEEecCC-----CHHHHHHHHHHHHHHhhc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSIDGK-----TEDEVCRSLERVLLTMRI 685 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 685 (944)
.+.+.+.++|++|+++|++++++|||+...+..++..+++..+- .++..+...+. ...+..............
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 57888999999999999999999999999999999988875430 01111111111 111111111122221111
Q ss_pred cc------CCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCC
Q 002275 686 TT------SEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDG 753 (944)
Q Consensus 686 ~~------~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg 753 (944)
.. ...............+. .+...+++...........+.++.|. +|...++.+.+. .+.|+++|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVET-VREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHH-HHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred ccceeecccceeeEEEecccccHHH-HHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 11 11112222112222222 22222222211111223344566665 688888876553 5689999999
Q ss_pred ccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 754 GNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 754 ~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
.||++||+.||+|||| +|+.+.+++.||+|+.+++.
T Consensus 178 ~NDi~ml~~ag~~vav-~na~~~~k~~A~~v~~~~~~ 213 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKEYG 213 (230)
T ss_dssp GGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSCHH
T ss_pred ccHHHHHHHCCeEEEE-CCCCHHHHHhCCEEECCCCc
Confidence 9999999999999999 89999999999999986543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.33 E-value=2.5e-12 Score=133.71 Aligned_cols=177 Identities=11% Similarity=0.137 Sum_probs=110.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC---CCCCeEEEecC--------CCHHHHHHHHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---EPKGQLLSIDG--------KTEDEVCRSLERV 679 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~ 679 (944)
...+.+.++++|++++++| +++++|||+...+..+..+.+.... ..+|.++...+ -..+.... +...
T Consensus 17 ~~~i~~~~~~al~~l~~~~-~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i~~~~i~~~~~~~-i~~~ 94 (267)
T d1nf2a_ 17 NLEISEKDRRNIEKLSRKC-YVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKD-IIEY 94 (267)
T ss_dssp TSCCCHHHHHHHHHHTTTS-EEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHH-HHHH
T ss_pred cCccCHHHHHHHHHHHcCC-EEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccccccccCCCHHHHHH-HHHH
Confidence 3468889999999998755 7999999999999999888765331 11122222211 11111211 1111
Q ss_pred HHHhhcc----------------------------------------cCCCCcEEEEEcchhHHHHHHHHHHHHHh-hhh
Q 002275 680 LLTMRIT----------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE-LAI 718 (944)
Q Consensus 680 ~~~~~~~----------------------------------------~~~~~~~~lv~~~~~~~~~~~~~~~~~~~-~~~ 718 (944)
....... ........+..+...++...+.+.+.+.. +..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~ 174 (267)
T d1nf2a_ 95 IKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKV 174 (267)
T ss_dssp HGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEE
T ss_pred HHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccHHHHHHHHHHHHHhhCCcEEE
Confidence 1110000 00001111222233333444444444433 222
Q ss_pred ccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 719 LSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 719 ~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
......+.+++|. +|+..++.+.+. ...|++||||.||++||+.||+|||| +|+.+++++.||+|+.+++.
T Consensus 175 ~~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~-~na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 175 FKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp EEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCTTT
T ss_pred EEeecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCCCCc
Confidence 3334556788997 699988877653 46799999999999999999999999 89999999999999986654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.31 E-value=1.2e-12 Score=135.47 Aligned_cols=67 Identities=30% Similarity=0.446 Sum_probs=57.8
Q ss_pred eEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 723 AICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 723 ~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
..+.++.|. +|+..++.|.+. .+++++||||.||++||+.||.|||| +|+.+++++.||+|+.+++.
T Consensus 175 ~~~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~na~~~lk~~A~~vt~~~~~ 247 (260)
T d2rbka1 175 PAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDE 247 (260)
T ss_dssp TTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGG
T ss_pred CcEEEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-CCCCHHHHHhCCEEeCCCCc
Confidence 345778887 699988887653 57899999999999999999999999 99999999999999887654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.30 E-value=2.2e-12 Score=135.28 Aligned_cols=173 Identities=14% Similarity=0.137 Sum_probs=106.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC---C-------------CCCeEEEecCCCHHHHHHHH
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---E-------------PKGQLLSIDGKTEDEVCRSL 676 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~---~-------------~~~~~~~~~~~~~~~~~~~~ 676 (944)
++.+.++++|++|+++|++++++|||+...+..++.++++... . ..+................+
T Consensus 28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (283)
T d2b30a1 28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELI 107 (283)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEEcCCCcEeeecccCHHHHHHHH
Confidence 5888999999999999999999999999999988876653211 0 00111111222222222222
Q ss_pred HHHHHHhhccc------------------------------------------CCCCcEEEEEcchhHHHHHHHHHHHHH
Q 002275 677 ERVLLTMRITT------------------------------------------SEPKDVAFVVDGWALEIALKHYRKAFT 714 (944)
Q Consensus 677 ~~~~~~~~~~~------------------------------------------~~~~~~~lv~~~~~~~~~~~~~~~~~~ 714 (944)
..... ..... .......+..+....+...+.+.+.+.
T Consensus 108 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (283)
T d2b30a1 108 SYLVE-KNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFK 186 (283)
T ss_dssp HHHHH-TTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHST
T ss_pred HHHHh-hcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhcccceEEEEecCHHHHHHHHHHHHHHhc
Confidence 22111 10000 000111112223344444444444332
Q ss_pred hh-hhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeecc
Q 002275 715 EL-AILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (944)
Q Consensus 715 ~~-~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~ 787 (944)
.. ........+.++.|. +|+..++.+.+. .+.|++||||.||++||+.||+|||| +|+.+++++.||+|+.+
T Consensus 187 ~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~-~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 187 NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPV 265 (283)
T ss_dssp TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred ccceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe-CCCCHHHHHhCCEEECC
Confidence 21 111222335677776 588877777653 46899999999999999999999999 99999999999999964
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.30 E-value=2.5e-12 Score=129.85 Aligned_cols=176 Identities=15% Similarity=0.147 Sum_probs=108.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC--CCCeEEEecCCC------HHHHHHHHHHHHHH
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSIDGKT------EDEVCRSLERVLLT 682 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~ 682 (944)
+.++.+++.+++++|++.|++++++|||+...+..++...|+..+- .+|..+...+.. .+............
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 4567889999999999999999999999999999999988875430 011111111111 01111111111110
Q ss_pred hhc-----ccCCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhc----CCeEEEec
Q 002275 683 MRI-----TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIG 751 (944)
Q Consensus 683 ~~~-----~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v~~iG 751 (944)
... .........+..+....+...+.... ..........+.++.|. +|+..++.+.+. .+.|+++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~G 174 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAES---RGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIG 174 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHT---TTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhh---cCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeec
Confidence 000 00111222333333333333222111 11111222335567776 699888877653 46799999
Q ss_pred CCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccc
Q 002275 752 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 752 Dg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
||.||++||+.||+|||| +|+.+.+++.||+|+...+.
T Consensus 175 Ds~nD~~m~~~a~~~vav-~na~~~~k~~ad~v~~~~~~ 212 (225)
T d1l6ra_ 175 DSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYSYG 212 (225)
T ss_dssp CSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCCTT
T ss_pred CCcchHHHHHHCCeEEEE-CCCcHHHHHhCCEEECCCCc
Confidence 999999999999999999 89999999999999987654
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.30 E-value=1.2e-13 Score=155.19 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=63.7
Q ss_pred ccccccCCCceeeeccc-cccccchHHHHHHHhhHHHHHHHHHHHHhhcccccccc-----cccchhhhHHHHHHHHHHH
Q 002275 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN-----PASTWGPLIFIFAVSATKE 84 (944)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~fl~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~i~~~~~ 84 (944)
++|+++||+|+++.++. ++| +.+++||++|++++++++++++++....... .+...+.+++++++++.++
T Consensus 30 ~~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i~ 105 (472)
T d1wpga4 30 KRHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 105 (472)
T ss_dssp HHHHHHSCCSSCCCCCCCCHH----HHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccchhHhHhhhhhheeeeeeeEE
Confidence 47999999999999774 555 8999999999999888988888875432211 1122244556667788999
Q ss_pred HHHHHHHhhhhHHhc
Q 002275 85 AWDDYNRYLSDKKAN 99 (944)
Q Consensus 85 ~~~~~~~~~~~~~~~ 99 (944)
++||+++.++...+.
T Consensus 106 ~~qe~~a~~~~~~l~ 120 (472)
T d1wpga4 106 VWQERNAENAIEALK 120 (472)
T ss_dssp HHHHHSCCCHHHHHG
T ss_pred eEEechHHHHHHHHh
Confidence 999999887765553
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.19 E-value=7e-12 Score=128.07 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=40.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~ 655 (944)
.+...+.++++|++|+++|++++++|||+...+..+.+.+++..+
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~ 59 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETP 59 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccccc
Confidence 456678899999999999999999999999999999999987543
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=1.2e-10 Score=117.64 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=39.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
..+.+.++++|++|+++|++++++|||+...+..+..++++.
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 458899999999999999999999999999999999999874
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.10 E-value=1.6e-10 Score=109.90 Aligned_cols=98 Identities=14% Similarity=0.080 Sum_probs=79.7
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCcEEEEEcc
Q 002275 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (944)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~ 699 (944)
.+|+.|++.|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 37999999999999999999999999999887621
Q ss_pred hhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHH----HhhcCCeEEEecCCccchhhhhhcCeeEEecccchH
Q 002275 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL----LKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (944)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~----l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (944)
.+. ...+|...++. ++-..++|+++||+.||++||+.|++|+|| +|+.+
T Consensus 74 ------------------------~~~--~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap-~nA~~ 126 (177)
T d1k1ea_ 74 ------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPI 126 (177)
T ss_dssp ------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCH
T ss_pred ------------------------ccc--ccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc-CCccH
Confidence 111 22345544444 333468899999999999999999999999 99999
Q ss_pred HHhhhCcEeecccc
Q 002275 776 QAARAADYSIGKFR 789 (944)
Q Consensus 776 ~~k~~Ad~v~~~~~ 789 (944)
.+++.||+|+.+..
T Consensus 127 ~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 127 YVKNAVDHVLSTHG 140 (177)
T ss_dssp HHHTTSSEECSSCT
T ss_pred HHHHhCCEEeCCCC
Confidence 99999999998643
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=3.6e-10 Score=112.71 Aligned_cols=129 Identities=22% Similarity=0.353 Sum_probs=91.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCC-eEE-EecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKG-QLL-SIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
+++|++.+.|+.||++|++++++||.....+.++++.+|+.....-. .+. ..+|..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~---------------------- 139 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEY---------------------- 139 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCE----------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcc----------------------
Confidence 47899999999999999999999999999999999999985321000 000 000000
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc--CCeEEEecCCccchhhhhhcCeeEE
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKADIGVG 768 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~vgIa 768 (944)
++.. ... ....+..|..+++.++.. .+.++++|||.||++|++.||++||
T Consensus 140 -------~g~~------------------~~~---p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va 191 (217)
T d1nnla_ 140 -------AGFD------------------ETQ---PTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIG 191 (217)
T ss_dssp -------EEEC------------------TTS---GGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEE
T ss_pred -------ccce------------------eee---eeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEE
Confidence 0000 000 002345699999988753 4679999999999999999999999
Q ss_pred ecccc-hHHHhhhCcEeeccccch
Q 002275 769 ISGRE-GLQAARAADYSIGKFRFL 791 (944)
Q Consensus 769 m~gn~-~~~~k~~Ad~v~~~~~~l 791 (944)
+.++. ...+++.||+++.++..+
T Consensus 192 ~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 192 FGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp ECSSCCCHHHHHHCSEEESCGGGG
T ss_pred ECCCHHHHHHHHhCCCEeCCHHHh
Confidence 95443 345667899999886654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.02 E-value=4.3e-10 Score=114.61 Aligned_cols=168 Identities=14% Similarity=0.186 Sum_probs=100.4
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCC----CCCeEEEecCCCHHHHHHHH---------HHHHHHh
Q 002275 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTEDEVCRSL---------ERVLLTM 683 (944)
Q Consensus 617 ~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 683 (944)
+..+++.++++.|+.++++|||+...+..+.+.+++..++ .+|..+.............+ .......
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 3455677788999999999999999999999999986542 12222322222211111111 1111111
Q ss_pred hc------ccCCCCcEEEEEcchhHHHHHHHHHHHHHhhh----hccceeEEEEeChh--hHHHHHHHHhhc----CCeE
Q 002275 684 RI------TTSEPKDVAFVVDGWALEIALKHYRKAFTELA----ILSRTAICCRVTPS--QKAQLVELLKSC----DYRT 747 (944)
Q Consensus 684 ~~------~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~p~--~K~~iv~~l~~~----~~~v 747 (944)
.. .....................+...+...... .........++.|. +|+..++.+.+. .++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 10 00112223333332332333333333332211 11111224567776 699988888764 3679
Q ss_pred EEecCCccchhhhhhcCeeEEecccchHHHhhhCcEee
Q 002275 748 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (944)
Q Consensus 748 ~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~ 785 (944)
+++|||.||++||+.||.||+| +|+.+++++.||.+.
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav-~na~~~lk~~a~~~~ 218 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWG 218 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHC
T ss_pred EEEcCCCCCHHHHhhCCcEEEe-CCCCHHHHHHhhccc
Confidence 9999999999999999999999 999999999888443
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.99 E-value=1.1e-09 Score=122.30 Aligned_cols=135 Identities=14% Similarity=0.149 Sum_probs=109.3
Q ss_pred hhhhhhhhhhhhHHhhhhHHHHHHHHHHHHHhhhccccccchhhhHHHHhhhhhhhhhHhhhhccCCCChhhhhcCCccc
Q 002275 798 HGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQIL 877 (944)
Q Consensus 798 ~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~y 877 (944)
.||.++.|+++.+.|.+..|+...+..++..++. ..+++++.|++|+|++++.+|++++++| |+++++|++||+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~e--p~d~~iM~~~Pr- 300 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFN--PPDLDIMDRPPR- 300 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTC--CCCSGGGGSCCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcC--CCchhhhcCCCC-
Confidence 5999999999999999998887666555554433 3467999999999999999999999988 699999999995
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHHHHHhhhhhhhcccCc------------------------------chhhhhHHH
Q 002275 878 FYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKS------------------------------EMEEVSMVA 927 (944)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~ 927 (944)
++++.+++..++..++.++++.++..+...++.+.+... .....+|++
T Consensus 301 --~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~ 378 (472)
T d1wpga4 301 --SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMA 378 (472)
T ss_dssp --CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHH
T ss_pred --CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHH
Confidence 788899999999999888888888776666555433110 123567999
Q ss_pred HHHHHHHHHHhhh
Q 002275 928 LSGCIWLQAFVVA 940 (944)
Q Consensus 928 f~~~~~~~~~~~~ 940 (944)
|++++++|+|+.+
T Consensus 379 F~~lv~~q~~~~~ 391 (472)
T d1wpga4 379 LSVLVTIEMCNAL 391 (472)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.76 E-value=4.3e-09 Score=105.55 Aligned_cols=69 Identities=10% Similarity=0.191 Sum_probs=52.9
Q ss_pred ceeEEEEeChh--hHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEecccchHHHhhhCcEeeccccchhH
Q 002275 721 RTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 721 ~~~v~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~k~~Ad~v~~~~~~l~~ 793 (944)
+...+.+++|. +|+..++.|... ..+++|||+.||++||+.|+.|+|| +++. .+..|++.+.+.+....
T Consensus 146 ~~~~~idi~p~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av-~~g~--~~~~A~~~~~~~~ev~~ 216 (229)
T d1u02a_ 146 YGKMIIELRVPGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTI-KVGE--GETHAKFHVADYIEMRK 216 (229)
T ss_dssp ECSSEEEEECTTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEE-EESS--SCCCCSEEESSHHHHHH
T ss_pred eeceEEEEecCCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEE-EeCC--CCccCeEEcCCHHHHHH
Confidence 34457899998 699999999875 5789999999999999999777766 3332 23578999887555433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.74 E-value=1.2e-08 Score=100.33 Aligned_cols=126 Identities=22% Similarity=0.218 Sum_probs=85.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
+..+.....++.+ +.+.+.++.|+.............++...... ......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~l~~~~-------------------------- 119 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc--eeeeec--------------------------
Confidence 4556666666655 57899999999988888888888876432110 000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
...........+..+...++.++...++|+|||||.||++||+.||+|||| ++
T Consensus 120 --------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na 172 (206)
T d1rkua_ 120 --------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA 172 (206)
T ss_dssp --------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC
T ss_pred --------------------------ccccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CC
Confidence 001122223344456678888888899999999999999999999999999 55
Q ss_pred chHHHhh-hCcEeec-cccchhHHH
Q 002275 773 EGLQAAR-AADYSIG-KFRFLKRLI 795 (944)
Q Consensus 773 ~~~~~k~-~Ad~v~~-~~~~l~~l~ 795 (944)
. +++++ ++|+++. +++.+...+
T Consensus 173 ~-~~v~~~~~~~~~~~~~~d~~~~~ 196 (206)
T d1rkua_ 173 P-ENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp C-HHHHHHCTTSCEECSHHHHHHHH
T ss_pred C-HHHHHhCCCceeecCHHHHHHHH
Confidence 4 55555 7899875 444455443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.71 E-value=2.6e-08 Score=98.08 Aligned_cols=124 Identities=20% Similarity=0.190 Sum_probs=85.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
..++.+++.+.++.++..|..++++||.....+.......+....-.. ......
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------------ 126 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKD------------------------ 126 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEET------------------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccc------------------------
Confidence 357889999999999999999999999999888888887765321000 000000
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeC--hhhHHH----HHHHHhhcCCeEEEecCCccchhhhhhcC
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~----iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (944)
........... +..|.. +.+.++...+.++++|||.||++|++.||
T Consensus 127 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag 178 (210)
T d1j97a_ 127 ----------------------------GKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAG 178 (210)
T ss_dssp ----------------------------TEEEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCS
T ss_pred ----------------------------ccccccccccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCC
Confidence 00011111111 122333 33344444678999999999999999999
Q ss_pred eeEEecccchHHHhhhCcEeeccccc
Q 002275 765 IGVGISGREGLQAARAADYSIGKFRF 790 (944)
Q Consensus 765 vgIam~gn~~~~~k~~Ad~v~~~~~~ 790 (944)
+|||| |+.+.+++.||+|+.+++.
T Consensus 179 ~~va~--na~~~lk~~Ad~vi~~~d~ 202 (210)
T d1j97a_ 179 LKIAF--CAKPILKEKADICIEKRDL 202 (210)
T ss_dssp EEEEE--SCCHHHHTTCSEEECSSCG
T ss_pred CCEEE--CCCHHHHHhCCEEEcCCCH
Confidence 99999 5677899999999986553
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=2.6e-09 Score=108.18 Aligned_cols=64 Identities=17% Similarity=0.188 Sum_probs=54.2
Q ss_pred eeEEEEeChh--hHHHHHHHHhhc-CCeEEEecCC----ccchhhhhhcC-eeEEecccchHHHhhhCcEeec
Q 002275 722 TAICCRVTPS--QKAQLVELLKSC-DYRTLAIGDG----GNDVRMIQKAD-IGVGISGREGLQAARAADYSIG 786 (944)
Q Consensus 722 ~~v~~~~~p~--~K~~iv~~l~~~-~~~v~~iGDg----~ND~~ml~~A~-vgIam~gn~~~~~k~~Ad~v~~ 786 (944)
...+.+++|. +|+..++.|.+. .++|++|||+ .||++||+.|+ .|+|| +|+.+.+|..+|++++
T Consensus 173 ~~~~lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av-~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 173 GMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFP 244 (244)
T ss_dssp SSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCT
T ss_pred cCccceecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc-CCHHHHHHHHHHhcCC
Confidence 3456788887 599999999764 6789999995 59999999998 79999 9999999999998753
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.57 E-value=3.8e-08 Score=98.40 Aligned_cols=134 Identities=14% Similarity=0.135 Sum_probs=91.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
+++|++.+.++.|+++|++++++||-....+..+.+++|+...-.... ....+...
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~-~~~~~~~~----------------------- 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNH-ASFDNDYI----------------------- 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEE-EECSSSBC-----------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeee-EEEeCCcc-----------------------
Confidence 478999999999999999999999999999999999888643210000 00000000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEeccc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (944)
...+. ...........|..|..+++.++..++.|+++||+.||++|++.||+++|+ +.
T Consensus 131 ---~~~~~------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~-~~ 188 (226)
T d2feaa1 131 ---HIDWP------------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-DY 188 (226)
T ss_dssp ---EEECT------------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-HH
T ss_pred ---eeccc------------------cccccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEe-cc
Confidence 00000 000111223456678999999998899999999999999999999999999 66
Q ss_pred chHHHhh-hCcE-eeccccchh
Q 002275 773 EGLQAAR-AADY-SIGKFRFLK 792 (944)
Q Consensus 773 ~~~~~k~-~Ad~-v~~~~~~l~ 792 (944)
..+.+.+ ..++ ...+++.+.
T Consensus 189 ~~~~~~~~~~~~~~~~d~~~i~ 210 (226)
T d2feaa1 189 LLNECREQNLNHLPYQDFYEIR 210 (226)
T ss_dssp HHHHHHHTTCCEECCSSHHHHH
T ss_pred hHHHHHHcCCCeeecCCHHHHH
Confidence 6665655 3343 334555443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.25 E-value=9.9e-08 Score=96.14 Aligned_cols=58 Identities=21% Similarity=0.320 Sum_probs=44.5
Q ss_pred EEEEeChh--hHHHHHHHHhhc-CCeEEEecC----CccchhhhhhcC-eeEEecccchHHHhhhCcE
Q 002275 724 ICCRVTPS--QKAQLVELLKSC-DYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADY 783 (944)
Q Consensus 724 v~~~~~p~--~K~~iv~~l~~~-~~~v~~iGD----g~ND~~ml~~A~-vgIam~gn~~~~~k~~Ad~ 783 (944)
.+.++.|. +|+..++.|... .++|++||| |.||++||+.|+ .|+++ +| .+++++.++.
T Consensus 175 ~~lei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v-~~-~~~~~~~~~~ 240 (243)
T d2amya1 175 ISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TA-PEDTRRICEL 240 (243)
T ss_dssp TEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SS-HHHHHHHHHH
T ss_pred ccceeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEe-CC-HHHHHHHHHH
Confidence 46788887 599988888653 578999999 789999999998 57776 44 6778876654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.54 E-value=5.5e-05 Score=74.24 Aligned_cols=125 Identities=20% Similarity=0.238 Sum_probs=85.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.|++.+.++.|++.|+++.++||.+...+..+.+.+|+...-.. ++....
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~--~~~~~~------------------------- 146 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--MLGGQS------------------------- 146 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTT-------------------------
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccc--cccccc-------------------------
Confidence 35689999999999999999999999999999999999998533111 000000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEEec
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGIS 770 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam~ 770 (944)
.....-.|.--..+.+.++...+.+++|||+.+|+.+-+.||+ .|.+.
T Consensus 147 -------------------------------~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~ 195 (224)
T d2hsza1 147 -------------------------------LPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT 195 (224)
T ss_dssp -------------------------------SSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred -------------------------------cccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence 0000001223345556666667889999999999999999997 45552
Q ss_pred -c-cchHHHhh-hCcEeeccccchhHH
Q 002275 771 -G-REGLQAAR-AADYSIGKFRFLKRL 794 (944)
Q Consensus 771 -g-n~~~~~k~-~Ad~v~~~~~~l~~l 794 (944)
| +......+ .+|+++.+.+.+..+
T Consensus 196 ~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 196 YGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp SSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 1 22222333 589999988777654
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.52 E-value=8.7e-05 Score=72.53 Aligned_cols=122 Identities=12% Similarity=0.082 Sum_probs=83.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.++++.|+++|+++.++||.+...+..+.+..|+...-.. ++..+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~--i~~~~~-------------------------- 139 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA--LASAEK-------------------------- 139 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEECTT--------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccc--cccccc--------------------------
Confidence 4569999999999999999999999999999999999998432111 111000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Eecc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~g 771 (944)
. ....-.|.-=..+++.++-..+++++|||+.+|+.|-+.+|+.. ++.+
T Consensus 140 -----------------------------~-~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~ 189 (218)
T d1te2a_ 140 -----------------------------L-PYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPA 189 (218)
T ss_dssp -----------------------------S-SCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred -----------------------------c-ccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECC
Confidence 0 00000122234566666666788999999999999999999754 4422
Q ss_pred c-chHHH-hhhCcEeeccccchh
Q 002275 772 R-EGLQA-ARAADYSIGKFRFLK 792 (944)
Q Consensus 772 n-~~~~~-k~~Ad~v~~~~~~l~ 792 (944)
. ...+. ...||+++.++..+.
T Consensus 190 ~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 190 PEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp TTTTTCGGGGGSSEECSCGGGCC
T ss_pred CCCccchhhcCCCEEECChhhCC
Confidence 2 11122 236899998887653
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.42 E-value=0.00015 Score=71.41 Aligned_cols=121 Identities=17% Similarity=0.175 Sum_probs=81.5
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~G-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++-|++.++++.|++.| +++.++||.+...+....+..|+...-+. ++..+..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~------------------------ 144 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADDA------------------------ 144 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTTC------------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc--ccccccc------------------------
Confidence 45689999999999987 89999999999999999999998654221 1100000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhH----HHHHHHHhh---cCCeEEEecCCccchhhhhhcC
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKS---CDYRTLAIGDGGNDVRMIQKAD 764 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K----~~iv~~l~~---~~~~v~~iGDg~ND~~ml~~A~ 764 (944)
..++.+ ...++.+.. ..+.+++|||+.+|+.|-+.||
T Consensus 145 ------------------------------------~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG 188 (228)
T d2hcfa1 145 ------------------------------------LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELD 188 (228)
T ss_dssp ------------------------------------SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTT
T ss_pred ------------------------------------ccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcC
Confidence 011111 122333322 3468999999999999999999
Q ss_pred eeE-Ee-cccc-hHHHhh-hCcEeeccccchhHHH
Q 002275 765 IGV-GI-SGRE-GLQAAR-AADYSIGKFRFLKRLI 795 (944)
Q Consensus 765 vgI-am-~gn~-~~~~k~-~Ad~v~~~~~~l~~l~ 795 (944)
+.. ++ .|.. .++..+ .||+++.++..+..++
T Consensus 189 ~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 189 ARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223 (228)
T ss_dssp CEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred CEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence 652 33 1443 333344 6899999988877664
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.28 E-value=0.00058 Score=68.90 Aligned_cols=43 Identities=12% Similarity=0.268 Sum_probs=40.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~ 655 (944)
++|+++++.++.|++.|+++.++||--...+.++++++|+..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ 177 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS 177 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCcc
Confidence 4899999999999999999999999999999999999998654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.0015 Score=61.24 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=43.4
Q ss_pred HHHHHHHhhcCCeEEEecCCccchhhhhhcCee--EEe-cccchH-HHhhhCcEeeccccchhHH
Q 002275 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGI-SGREGL-QAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg--Iam-~gn~~~-~~k~~Ad~v~~~~~~l~~l 794 (944)
..+++.++...+.++||||..+|+.+=+.|+++ +.+ +|.... .....||+|+.+...+..+
T Consensus 115 ~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 115 LSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp HHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred cchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 455566665667899999999999999999985 333 233322 3334699999987776654
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.98 E-value=0.00063 Score=65.61 Aligned_cols=117 Identities=17% Similarity=0.138 Sum_probs=81.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++.+++.+.++.++..| ++.++|+.+...+..+...+|+...-+
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd---------------------------------- 127 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD---------------------------------- 127 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----------------------------------
Confidence 467899999999999775 899999999999999999999853321
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhH----HHHHHHHhhcCCeEEEecCCccchhhhhhcCe-e
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-G 766 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-g 766 (944)
..+.++-.+..| ..+++.++-..+.+++|||+.+|+.+-+.||+ .
T Consensus 128 ------------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~ 177 (210)
T d2ah5a1 128 ------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177 (210)
T ss_dssp ------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred ------------------------------ccccccccccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeE
Confidence 111111122223 33444444456789999999999999999998 4
Q ss_pred EEec-c-cchHHHhh-hCcEeeccccchhH
Q 002275 767 VGIS-G-REGLQAAR-AADYSIGKFRFLKR 793 (944)
Q Consensus 767 Iam~-g-n~~~~~k~-~Ad~v~~~~~~l~~ 793 (944)
|++. | ...++..+ .+|+++.+...+..
T Consensus 178 i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 178 LAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 5552 2 23344444 48999888666543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.98 E-value=0.00047 Score=69.06 Aligned_cols=126 Identities=21% Similarity=0.215 Sum_probs=83.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.+++.++++.|+++|+++.++||.+...+..+.+..|+...... .++
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d-~~~------------------------------ 147 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-FLV------------------------------ 147 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-CCB------------------------------
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc-ccc------------------------------
Confidence 6889999999999999999999999999999888888877432111 000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc-CCeEEEecCCccchhhhhhcCee-EEe-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIG-VGI- 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vg-Iam- 769 (944)
.++ ......-.|..=..+++.+... .+.+++|||+.+|+.+=+.||+- |++
T Consensus 148 -----~~d---------------------~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~ 201 (257)
T d1swva_ 148 -----TPD---------------------DVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI 201 (257)
T ss_dssp -----CGG---------------------GSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC
T ss_pred -----ccc---------------------cccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc
Confidence 000 0000011233345566666653 47899999999999999999974 444
Q ss_pred cccc-----hH-------------------HHhh-hCcEeeccccchhHHH
Q 002275 770 SGRE-----GL-------------------QAAR-AADYSIGKFRFLKRLI 795 (944)
Q Consensus 770 ~gn~-----~~-------------------~~k~-~Ad~v~~~~~~l~~l~ 795 (944)
+|.. .+ .... -||||+.+...+..++
T Consensus 202 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii 252 (257)
T d1swva_ 202 LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM 252 (257)
T ss_dssp TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHH
Confidence 2321 00 0111 2899999988776654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.82 E-value=0.0012 Score=63.14 Aligned_cols=117 Identities=18% Similarity=0.176 Sum_probs=75.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.++++.|+++|+++.++|+... .+..+.+..|+...-+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~----------------------------------- 125 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT----------------------------------- 125 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE-----------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc-----------------------------------
Confidence 5679999999999999999999999765 4566777888743200
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE-Eecc
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~g 771 (944)
.++... ......-.|+--..+++.++-..+.+++|||+.+|+.+-+.+|+.. ++ .
T Consensus 126 --~i~~s~---------------------~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v-~ 181 (204)
T d2go7a1 126 --EILTSQ---------------------SGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 181 (204)
T ss_dssp --EEECGG---------------------GCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred --cccccc---------------------cccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEE-c
Confidence 000000 0000000222334566666666789999999999999999999853 45 3
Q ss_pred cchHHHhhhCcEeeccccchhH
Q 002275 772 REGLQAARAADYSIGKFRFLKR 793 (944)
Q Consensus 772 n~~~~~k~~Ad~v~~~~~~l~~ 793 (944)
... ..+|+.+.+...+..
T Consensus 182 ~~~----~~~~~~~~~~~dl~~ 199 (204)
T d2go7a1 182 EST----YEGNHRIQALADISR 199 (204)
T ss_dssp CCS----CTTEEECSSTTHHHH
T ss_pred CCC----CCcCeecCCHHHHHH
Confidence 321 246666665554443
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.78 E-value=0.00036 Score=62.21 Aligned_cols=105 Identities=20% Similarity=0.273 Sum_probs=73.1
Q ss_pred cCCccHHHHHHHHHhCCeEEEeecCcEEEEEECCeEEEEEEEEeecCCCCCCeeEEEEEecCCCcEEEEecCchhhcccc
Q 002275 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533 (944)
Q Consensus 454 ~~~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~ 533 (944)
+.||..+|++++|++.+........ +.-....+|....+...+.+ +| ..+..|++..+...
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~g~~~----~g--~~v~~G~~~~~~~~ 89 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERDVQ-------------SLHATFVPFTAQSRMSGINI----DN--RMIRKGSVDAIRRH 89 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCCTT-------------TTTCEEEEEETTTTEEEEEE----TT--EEEEEECHHHHHHH
T ss_pred CCchHHHHHHHHHHHhcCCCccccc-------------cccccccccccccceEEEEE----CC--EEEEecHHHHHHHH
Confidence 6899999999999876532211100 11112345555555444433 23 35677999877665
Q ss_pred ccc--CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhccceEeeEeccc
Q 002275 534 AHA--GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIE 611 (944)
Q Consensus 534 ~~~--~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~ 611 (944)
+.. ...+.++.+.++++..+|.+++.+| .|.+++|++++.
T Consensus 90 ~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va--------------------------------------~d~~~~G~i~l~ 131 (136)
T d2a29a1 90 VEANGGHFPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALK 131 (136)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHTTSEEEEEE--------------------------------------ETTEEEEEEEEE
T ss_pred HHHcCCCCcHHHHHHHHHHHHCCCeEEEEE--------------------------------------ECCEEEEEEEEE
Confidence 532 3456788899999999999999999 678999999999
Q ss_pred cccC
Q 002275 612 DRLQ 615 (944)
Q Consensus 612 d~lr 615 (944)
|+++
T Consensus 132 D~iK 135 (136)
T d2a29a1 132 DIVK 135 (136)
T ss_dssp ESSC
T ss_pred eecC
Confidence 9986
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.77 E-value=0.00052 Score=66.14 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=79.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.+.++.|++ ++++.++|+.....+..+.+..|+...-.
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~----------------------------------- 125 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 125 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccccc-----------------------------------
Confidence 466999999999974 79999999999999999998888743210
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe--c
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--S 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam--~ 770 (944)
.+..+.. . ....-.|.--..+++.++-..+++++|||+.+|+.+=+.||+.... .
T Consensus 126 --~i~~~~~--------------------~-~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~ 182 (207)
T d2hdoa1 126 --VTISADD--------------------T-PKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVW 182 (207)
T ss_dssp --EEECGGG--------------------S-SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGG
T ss_pred --ccccccc--------------------c-ccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEec
Confidence 0000000 0 0000022333556666665567899999999999999999998654 2
Q ss_pred ccchHHHhhhCcEeeccccch
Q 002275 771 GREGLQAARAADYSIGKFRFL 791 (944)
Q Consensus 771 gn~~~~~k~~Ad~v~~~~~~l 791 (944)
|.....-...+|+++.+...+
T Consensus 183 g~~~~~~~~~~~~~i~~l~dl 203 (207)
T d2hdoa1 183 GMDPNADHQKVAHRFQKPLDI 203 (207)
T ss_dssp GCCTTGGGSCCSEEESSGGGG
T ss_pred CCCChhHhhhcCcEeCCHHHH
Confidence 333333334678887665444
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0012 Score=65.16 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=80.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
.-.+.|++.+++++|+++|+++.++|+.+..........+|+....... ....+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~-~~~~d------------------------- 178 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV-DGHFD------------------------- 178 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC-SEEEC-------------------------
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhc-ceeec-------------------------
Confidence 3456899999999999999999999999998888888888864321100 00000
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEEe-
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI- 769 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam- 769 (944)
......-.|.-=..+++.++-..+++++|||..+|+.+=+.||+....
T Consensus 179 -------------------------------~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v 227 (253)
T d1zs9a1 179 -------------------------------TKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV 227 (253)
T ss_dssp -------------------------------GGGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred -------------------------------cccccCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 000000012222345666666678999999999999999999986544
Q ss_pred --cccchH-HHhhhCcEeeccccc
Q 002275 770 --SGREGL-QAARAADYSIGKFRF 790 (944)
Q Consensus 770 --~gn~~~-~~k~~Ad~v~~~~~~ 790 (944)
.|+... +....++.++.+++.
T Consensus 228 ~r~g~~~~~~~~~~~~~~i~sl~E 251 (253)
T d1zs9a1 228 VRPGNAGLTDDEKTYYSLITSFSE 251 (253)
T ss_dssp CCTTCCCCCHHHHHHSCEESSGGG
T ss_pred eCCCCCCCchhhcCCCcEECChHH
Confidence 234332 223467777777544
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.68 E-value=0.0021 Score=62.77 Aligned_cols=121 Identities=11% Similarity=0.066 Sum_probs=79.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.++++.|+ +|++++++|+..........+.+|+...-+. ++.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~--i~~----------------------------- 147 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDS--ITT----------------------------- 147 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEE-----------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccc--ccc-----------------------------
Confidence 46799999999997 5899999999988888888888887432110 100
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhcCCeEEEecCC-ccchhhhhhcCeeEE-
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVG- 768 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIa- 768 (944)
... . . ..-| +-=..+++.++-...++++|||+ .+|+.+=+.||+...
T Consensus 148 ------s~~--------------~---~------~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~ 198 (230)
T d1x42a1 148 ------SEE--------------A---G------FFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSIL 198 (230)
T ss_dssp ------HHH--------------H---T------BCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEE
T ss_pred ------ccc--------------c---c------ccchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEE
Confidence 000 0 0 0012 11234555665566789999998 689999898988642
Q ss_pred ec-ccchHHHhhhCcEeeccccchhHH
Q 002275 769 IS-GREGLQAARAADYSIGKFRFLKRL 794 (944)
Q Consensus 769 m~-gn~~~~~k~~Ad~v~~~~~~l~~l 794 (944)
+. +.........+|+++.+.+.+..+
T Consensus 199 v~~~~~~~~~~~~~d~~i~~l~el~~~ 225 (230)
T d1x42a1 199 LDRKGEKREFWDKCDFIVSDLREVIKI 225 (230)
T ss_dssp ECTTSCCGGGGGGSSEEESSTTHHHHH
T ss_pred ECCCCCCcccccCCCEEECCHHHHHHH
Confidence 31 223333445789999998777554
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.58 E-value=0.0013 Score=65.45 Aligned_cols=38 Identities=13% Similarity=0.196 Sum_probs=31.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~ 650 (944)
..-+++.++|++|+++|++++++|+++..+...+++.+
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 33478899999999999999999998877777776653
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.0041 Score=61.57 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=38.6
Q ss_pred HHHHHHhhcCCeEEEecCCc-cchhhhhhcCe-eEEe-cccchH-HHh---hhCcEeeccccch
Q 002275 735 QLVELLKSCDYRTLAIGDGG-NDVRMIQKADI-GVGI-SGREGL-QAA---RAADYSIGKFRFL 791 (944)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~v-gIam-~gn~~~-~~k---~~Ad~v~~~~~~l 791 (944)
.+++.++-..++++||||+. +|+.|-+.||+ +|.+ +|.... +.. ..+|+++.+...|
T Consensus 184 ~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 184 AALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred hhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence 45666665677899999996 59999999997 4544 232222 222 2359999886654
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.26 E-value=0.0022 Score=58.97 Aligned_cols=90 Identities=11% Similarity=0.026 Sum_probs=62.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh-hhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQ-NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
++.|++.++++.|+++|+++.++|+.+. ..+....+..++....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~----------------------------------- 90 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF----------------------------------- 90 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc-----------------------------------
Confidence 5789999999999999999999997654 3445555555542111
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChh--hHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeE
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (944)
..+...-.|. .-..+++.++-..+.+++|||+..|+.+-+.||+-.
T Consensus 91 ------------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 91 ------------------------------IQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp ------------------------------SEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ------------------------------eeeecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 1111111232 233455666666789999999999999999998854
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.14 E-value=0.0014 Score=59.17 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=28.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (944)
++++.|++.+.++.|+++|++++++|||+..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~ 64 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESG 64 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHH
Confidence 5788999999999999999999999999853
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.06 E-value=0.015 Score=57.68 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=41.7
Q ss_pred HHHHHHHhhcCCeEEEecCCc-cchhhhhhcCe-eEEe-cccc-hHHHhh---hCcEeeccccchhHH
Q 002275 734 AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADI-GVGI-SGRE-GLQAAR---AADYSIGKFRFLKRL 794 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~v-gIam-~gn~-~~~~k~---~Ad~v~~~~~~l~~l 794 (944)
..+++.++-..++++||||+. +|+.+-+.||+ +|.+ +|.. ..++.. .+|+++.+...+..+
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 345566665678999999995 69999999997 5655 2322 223332 359999987666554
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.76 E-value=0.008 Score=59.10 Aligned_cols=124 Identities=19% Similarity=0.164 Sum_probs=78.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
++.|++.++++.|+ .|++++++|+.+........+.+|+...-+. ++.
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--i~~----------------------------- 156 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDA--IVI----------------------------- 156 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE--EEE-----------------------------
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccc--ccc-----------------------------
Confidence 36689999999998 5899999999998888888888887433111 100
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCc-cchhhhhhcCee-EEec
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG-VGIS 770 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vg-Iam~ 770 (944)
+.. .. ...-.|+-=..+++.++-..+++++|||.. +|+.+=+.||+. +...
T Consensus 157 ------s~~--------------------~~-~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~ 209 (247)
T d2gfha1 157 ------GGE--------------------QK-EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWI 209 (247)
T ss_dssp ------GGG--------------------SS-SCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEE
T ss_pred ------ccc--------------------cc-cchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEE
Confidence 000 00 000011111345555555567899999995 899999999996 5331
Q ss_pred -ccc-h-HHHhhhCcEeeccccchhHHH
Q 002275 771 -GRE-G-LQAARAADYSIGKFRFLKRLI 795 (944)
Q Consensus 771 -gn~-~-~~~k~~Ad~v~~~~~~l~~l~ 795 (944)
+.+ . ......+|+++.+...+..++
T Consensus 210 ~~~~~~~~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 210 NKSGRVPLTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp CTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred CCCCCCcccccCCCCEEECCHHHHHHHH
Confidence 111 1 112235799998877766654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.45 E-value=0.015 Score=55.45 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEEe
Q 002275 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (944)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (944)
++++.+.-..+.++||||..+|+.+=+.||+ +|.+
T Consensus 137 ~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v 172 (209)
T d2o2xa1 137 EAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWL 172 (209)
T ss_dssp HHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred HhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEE
Confidence 4455555556789999999999999999998 4555
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.42 E-value=0.016 Score=54.11 Aligned_cols=40 Identities=15% Similarity=0.343 Sum_probs=33.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~ 653 (944)
++.+++++.++.|++.|++++++|+.+... ....+.+++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 567999999999999999999999976644 4567777763
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.33 E-value=0.011 Score=56.86 Aligned_cols=123 Identities=13% Similarity=0.138 Sum_probs=81.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
..+.+++.++++.+++.|+++.++|+-............++...-+. ++...
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~--~~~s~-------------------------- 143 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVD-------------------------- 143 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESG--------------------------
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccc--eeeee--------------------------
Confidence 35678999999999999999999999998888888887776433111 10000
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCeeEE-e-
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I- 769 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m- 769 (944)
. .....-.|.-=..+++.++-..+++++|||+.+|+.+=+.||+-.. +
T Consensus 144 ---------~---------------------~~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~ 193 (220)
T d1zrna_ 144 ---------P---------------------VQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWIN 193 (220)
T ss_dssp ---------G---------------------GTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred ---------e---------------------eeccccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEc
Confidence 0 0000001222234566666667889999999999999999998754 3
Q ss_pred -cccchHHHhhhCcEeeccccchh
Q 002275 770 -SGREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 770 -~gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
.+....+....+|+++.+...+.
T Consensus 194 r~~~~~~~~~~~~d~~i~~l~el~ 217 (220)
T d1zrna_ 194 RTGNVFEEMGQTPDWEVTSLRAVV 217 (220)
T ss_dssp TTCCCCCSSSCCCSEEESSHHHHH
T ss_pred CCCCCcccccCCCCEEECCHHHHH
Confidence 12233333446899887755443
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.07 E-value=0.012 Score=55.12 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=31.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCCC
Q 002275 614 LQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFI 653 (944)
Q Consensus 614 lr~~~~~aI~~l~~~Gi~v~i~TGd~~~----~a~~ia~~~gi~ 653 (944)
+.+++++.++.++++|++|+.+|||... ++..+.+.+|+-
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p 130 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP 130 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCC
Confidence 4568999999999999999999999743 445555667763
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.87 E-value=0.041 Score=54.09 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=39.6
Q ss_pred HHHHHHHhhcCCeEEEecCCcc-chhhhhhcCe-eEEe-cccc-hHHHhhh---CcEeeccccc
Q 002275 734 AQLVELLKSCDYRTLAIGDGGN-DVRMIQKADI-GVGI-SGRE-GLQAARA---ADYSIGKFRF 790 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~N-D~~ml~~A~v-gIam-~gn~-~~~~k~~---Ad~v~~~~~~ 790 (944)
..+++.++...++++||||+.+ |+.+=+.||+ +|.+ +|.. .+++... .|+++.+...
T Consensus 187 ~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e 250 (253)
T d1wvia_ 187 NKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAE 250 (253)
T ss_dssp HHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGG
T ss_pred eehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence 4566666666789999999976 9999999999 6776 2322 2233332 4999887554
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.79 E-value=0.016 Score=55.62 Aligned_cols=116 Identities=11% Similarity=0.147 Sum_probs=73.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCC
Q 002275 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (944)
Q Consensus 611 ~d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (944)
..++-|++.+.++.|++.|+++.++|+... +....+..|+...-.. ++
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~--i~---------------------------- 136 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA--IA---------------------------- 136 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE--EC----------------------------
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccc--cc----------------------------
Confidence 356789999999999999999999999754 5667777777433110 00
Q ss_pred CcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEEe
Q 002275 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (944)
Q Consensus 691 ~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (944)
.+. ......=.|+-=..+++.++...+++++|||+.+|+.+-+.||+ +|++
T Consensus 137 -------~~~---------------------~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v 188 (221)
T d1o08a_ 137 -------DPA---------------------EVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV 188 (221)
T ss_dssp -------CTT---------------------TSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred -------ccc---------------------cccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEE
Confidence 000 00000001222234555555567789999999999999999997 4566
Q ss_pred cccchHHHhhhCcEeecccc
Q 002275 770 SGREGLQAARAADYSIGKFR 789 (944)
Q Consensus 770 ~gn~~~~~k~~Ad~v~~~~~ 789 (944)
+... -...++.++.+..
T Consensus 189 -~~~~--~~~~~~~~~~~~~ 205 (221)
T d1o08a_ 189 -GRPE--DLGDDIVIVPDTS 205 (221)
T ss_dssp -SCHH--HHCSSSEEESSGG
T ss_pred -CChh--hcccccEEcCCcc
Confidence 4322 2334666665543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.70 E-value=0.024 Score=51.29 Aligned_cols=27 Identities=30% Similarity=0.470 Sum_probs=24.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDK 639 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (944)
++-|++.++|+.|+++|++++++|..+
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred eECccHHHHHHHHHHcCCceeeecccc
Confidence 457899999999999999999999764
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.59 E-value=0.12 Score=48.14 Aligned_cols=158 Identities=15% Similarity=0.116 Sum_probs=80.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEe----c-CCCHHHHHHHHHHHHHHhhccc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI----D-GKTEDEVCRSLERVLLTMRITT 687 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~ 687 (944)
.+-|++.++++.+++. ....++|--=..-+.++|..+|+- +.+.+- + -....+....+-........
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp-----~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d-- 152 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR-----GELHGTEVDFDSIAVPEGLREELLSIIDVIAS-- 152 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC-----SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHH--
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC-----ceeecccccccccCCChHHHHHHHHHhhhccC--
Confidence 3569999999999877 555566555555678899999983 112111 1 01111112211111111100
Q ss_pred CCCCcEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhc--CCeEEEecCCccchhhhhhc--
Q 002275 688 SEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKA-- 763 (944)
Q Consensus 688 ~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A-- 763 (944)
.+++.+......+......-....+... +--..|..+++..... -...+++||+..|.+||+.|
T Consensus 153 ---------~~~eel~e~~d~~f~~~e~~~i~e~Vk~---VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~ 220 (308)
T d1y8aa1 153 ---------LSGEELFRKLDELFSRSEVRKIVESVKA---VGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARG 220 (308)
T ss_dssp ---------CCHHHHHHHHHHHHHSHHHHHHHHTCBC---CCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHH
T ss_pred ---------ccHHHHHHHHHHHhccchHhhHHhhhcc---cCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhc
Confidence 0112222222211111100000111100 0123466666654432 23459999999999999987
Q ss_pred --CeeEEecccchHHHhhhCcEeeccccchh
Q 002275 764 --DIGVGISGREGLQAARAADYSIGKFRFLK 792 (944)
Q Consensus 764 --~vgIam~gn~~~~~k~~Ad~v~~~~~~l~ 792 (944)
|++||. |+..-+.+.||+.+.+-+...
T Consensus 221 ~gGlaIsF--NGN~Yal~eA~VaiiS~~~~a 249 (308)
T d1y8aa1 221 LGGVAIAF--NGNEYALKHADVVIISPTAMS 249 (308)
T ss_dssp TTCEEEEE--SCCHHHHTTCSEEEECSSTHH
T ss_pred CCCeeEEe--cCccccccccceEEeccchhH
Confidence 445555 444558889999987766543
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.26 E-value=0.27 Score=46.45 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=78.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCCc
Q 002275 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (944)
Q Consensus 613 ~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (944)
.+.+++.+.+++|+ .+..++|+.....+......+|+...-... +..
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-~~~----------------------------- 131 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPH-IYS----------------------------- 131 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTC-EEE-----------------------------
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccccee-ecc-----------------------------
Confidence 56788888887775 456789999999999999999985442210 000
Q ss_pred EEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeCh--hhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee-EEe
Q 002275 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGI 769 (944)
Q Consensus 693 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam 769 (944)
+... . .....| +-=..+.+.++-..+.+++|||+.+|+.+=+.||+- |++
T Consensus 132 ------~~~~-------------------~--~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v 184 (222)
T d2fdra1 132 ------AKDL-------------------G--ADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184 (222)
T ss_dssp ------HHHH-------------------C--TTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred ------cccc-------------------c--ccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0000 0 000122 222445666665678899999999999999999974 455
Q ss_pred cccc------hHHHhh-hCcEeeccccchhHHH
Q 002275 770 SGRE------GLQAAR-AADYSIGKFRFLKRLI 795 (944)
Q Consensus 770 ~gn~------~~~~k~-~Ad~v~~~~~~l~~l~ 795 (944)
.+.. .....+ -||+++.+.+.+..++
T Consensus 185 ~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 185 TGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred ccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 2211 122333 4999999988876553
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.03 E-value=0.076 Score=50.48 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=30.3
Q ss_pred hHHHHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEEe
Q 002275 732 QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (944)
Q Consensus 732 ~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (944)
--..+++.++-..+++++|||..+|+.+=+.||+ +|.+
T Consensus 162 ~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V 200 (222)
T d1cr6a1 162 IYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV 200 (222)
T ss_dssp HHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEEC
T ss_pred HHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEE
Confidence 3445667777677889999999999999999997 4555
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.69 E-value=0.056 Score=51.34 Aligned_cols=36 Identities=14% Similarity=0.251 Sum_probs=28.8
Q ss_pred HHHHHHHhhcCCeEEEecCCccchhhhhhcCe-eEEe
Q 002275 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (944)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (944)
..+++.++...+++++|||...|+.+-+.+|+ +|.+
T Consensus 166 ~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v 202 (225)
T d1zd3a1 166 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 202 (225)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEE
Confidence 34566666566789999999999999999999 5666
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| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=88.75 E-value=0.39 Score=45.99 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=62.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCCCCCCCCeEEEecCCCHHHHHHHHHHHHHHhhcccCCCC
Q 002275 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (944)
Q Consensus 612 d~lr~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (944)
.++-+++.+++++|+ |+++.++|+.+...+.......|+...-+. ++
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~--v~----------------------------- 138 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VI----------------------------- 138 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EE-----------------------------
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccc--cc-----------------------------
Confidence 466788999999885 789999999999888888888876433211 10
Q ss_pred cEEEEEcchhHHHHHHHHHHHHHhhhhccceeEEEEeChhhHHHHHHHHhhcCCeEEEecCCccchhhhhhcCee
Q 002275 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (944)
Q Consensus 692 ~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (944)
.+... -...=.|+-=..+++.++-..+++++|||+.+|+.+=+.||+.
T Consensus 139 ------~s~~~---------------------~~~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 139 ------SVDAK---------------------RVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp ------EGGGG---------------------TCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred ------ccccc---------------------cccCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 00000 0000012222345666666677899999999999998999865
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