BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002278
(943 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 167/278 (60%), Gaps = 10/278 (3%)
Query: 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLR-EFETELETIGSIRHR 672
+++N S K I+G G VYK L + +AVK+L + +F+TE+E I HR
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHR 95
Query: 673 NIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHG-PSKKVKLDWETRLKIAVGAAQGLAYL 731
N++ L G+ ++P LL Y YM NGS+ L P + LDW R +IA+G+A+GLAYL
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 155
Query: 732 HHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA 791
H C+P+IIHRDVK++NIL+DE F+A + DFG+A+ + H V GTIG+I PEY
Sbjct: 156 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYL 215
Query: 792 HTSRLNEKSDVYSFGIVLLEILTGKKAVD-----NESNLHQLIMSKA--DDNTVMEAVDP 844
T + +EK+DV+ +G++LLE++TG++A D N+ ++ L K + + VD
Sbjct: 216 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 275
Query: 845 EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
++ D V + Q+ALLCT+ P ERP M EV R
Sbjct: 276 DLQGNYKD-EEVEQLIQVALLCTQSSPMERPKMSEVVR 312
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 165/278 (59%), Gaps = 10/278 (3%)
Query: 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLR-EFETELETIGSIRHR 672
+++N K I+G G VYK L + +AVK+L + +F+TE+E I HR
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87
Query: 673 NIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHG-PSKKVKLDWETRLKIAVGAAQGLAYL 731
N++ L G+ ++P LL Y YM NGS+ L P + LDW R +IA+G+A+GLAYL
Sbjct: 88 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 147
Query: 732 HHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA 791
H C+P+IIHRDVK++NIL+DE F+A + DFG+A+ + H V G IG+I PEY
Sbjct: 148 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYL 207
Query: 792 HTSRLNEKSDVYSFGIVLLEILTGKKAVD-----NESNLHQLIMSKA--DDNTVMEAVDP 844
T + +EK+DV+ +G++LLE++TG++A D N+ ++ L K + + VD
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267
Query: 845 EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
++ D V + Q+ALLCT+ P ERP M EV R
Sbjct: 268 DLQGNYKD-EEVEQLIQVALLCTQSSPMERPKMSEVVR 304
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 200/384 (52%), Gaps = 35/384 (9%)
Query: 63 NLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQL 122
NL+ +D N + IP +G+C +L H+++S N L GD +IS +L+ LN+ +NQ
Sbjct: 198 NLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 123 TGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWN-EVLQYLGLRGNALTGMLSPDMCQL 181
GPIP + +L+ L LA N+ TGEIP + + L L L GN G + P
Sbjct: 257 VGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 314
Query: 182 TGLWYFDVRGNNLTGTIP-DSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
+ L + NN +G +P D++ ++LD+S+N+ +GE+P ++
Sbjct: 315 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL-------------- 360
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGK-----LYLHGNKLTGPIPP 295
L +L LDLS N GPI P NL K LYL N TG IPP
Sbjct: 361 --------TNLSASLLTLDLSSNNFSGPILP---NLCQNPKNTLQELYLQNNGFTGKIPP 409
Query: 296 ELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFN 355
L N S+L L L N L GTIP+ LG L +L +L L N LEG IP + L
Sbjct: 410 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 469
Query: 356 VHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPA 415
+ N L+G IPS N +L +++LS N G++P +GR+ NL L LS N+FSG++PA
Sbjct: 470 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 529
Query: 416 SIGDLEHLLTLNLSRNHLNGLLPA 439
+GD L+ L+L+ N NG +PA
Sbjct: 530 ELGDCRSLIWLDLNTNLFNGTIPA 553
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 225/454 (49%), Gaps = 52/454 (11%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEI-GNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKN 119
L++LQ + NK TG+IPD + G C +L ++LS N YG +P LE L L +
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 120 NQLTGPIP-STLTQIPNLKTLDLARNQLTGEIPR-LIYWNEVLQYLGLRGNALTGMLSPD 177
N +G +P TL ++ LK LDL+ N+ +GE+P L + L L L N +G + P+
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 178 MCQ--LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFL-QVATL 234
+CQ L ++ N TG IP ++ NC+ L +S+N ++G IP ++G L ++ L
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 235 SLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIP 294
L N L G+IP+ + ++ L L L N+L G IP L N + + L N+LTG IP
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 295 PELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNI---SSCTAL 351
+G + L+ L+L NN G IPAELG L L+L N G IP + S A
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA 564
Query: 352 N---------------QFNVHG---------------NRLS-------------GAIPSS 368
N + HG NRLS G +
Sbjct: 565 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 624
Query: 369 FRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNL 428
F N GS+ +L++S N G +P E+G + L L+L N+ SGS+P +GDL L L+L
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 684
Query: 429 SRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIP 462
S N L+G +P L + ID+S N LSG IP
Sbjct: 685 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 210/414 (50%), Gaps = 18/414 (4%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIG-----NCGSLVHIELSDNSLYGDIPFSISKLKQLEFL 115
L +L+ +D N ++G + +G CG L H+ +S N + GD+ +S+ LEFL
Sbjct: 147 LNSLEVLDLSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFL 202
Query: 116 NLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLS 175
++ +N + IP L L+ LD++ N+L+G+ R I L+ L + N G +
Sbjct: 203 DVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Query: 176 PDMCQLTGLWYFDVRGNNLTGTIPDSI-GNCTSFEILDISYNQITGEIPYNIGFLQVATL 234
P L L Y + N TG IPD + G C + LD+S N G +P G +
Sbjct: 262 P--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 319
Query: 235 SLQG-NKLTGKIP-EVIGLMQALAVLDLSENELVGPIPPILGNLSYTG-KLYLHGNKLTG 291
N +G++P + + M+ L VLDLS NE G +P L NLS + L L N +G
Sbjct: 320 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 379
Query: 292 PIPPELGNMSK--LSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCT 349
PI P L K L L LQNN G IP L +L L+L+ N L G IP ++ S +
Sbjct: 380 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 439
Query: 350 ALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNF 409
L + N L G IP + +L L L N+ G++P+ L NL+ + LS N
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 499
Query: 410 SGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPA 463
+G +P IG LE+L L LS N +G +PAE G+ RS+ +D++ N +G+IPA
Sbjct: 500 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 216/439 (49%), Gaps = 45/439 (10%)
Query: 64 LQSIDFQGNKLTGQIPD--EIGNCGSLVHIELSDNSLYGDIPFSIS---KLKQLEFLNLK 118
L S+D N L+G + +G+C L + +S N+L D P +S KL LE L+L
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLS 156
Query: 119 NNQLTGP--IPSTLTQ-IPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNAL-TGML 174
N ++G + L+ LK L ++ N+++G++ N L++L + N TG+
Sbjct: 157 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVN--LEFLDVSSNNFSTGI- 213
Query: 175 SPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATL 234
P + + L + D+ GN L+G +I CT ++L+IS NQ G IP + + L
Sbjct: 214 -PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP-LPLKSLQYL 271
Query: 235 SLQGNKLTGKIPEVI-GLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPI 293
SL NK TG+IP+ + G L LDLS N G +PP G+ S L L N +G +
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 294 PPE-LGNMSKLSYLQLQNNQLVGTIPAELGKLE-QLFELNLADNNLEGPI---------- 341
P + L M L L L N+ G +P L L L L+L+ NN GPI
Sbjct: 332 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 391
Query: 342 ----------------PHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNF 385
P +S+C+ L ++ N LSG IPSS +L L L L N
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 451
Query: 386 KGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLR 445
+G++P EL + L+TL L N+ +G +P+ + + +L ++LS N L G +P G L
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 511
Query: 446 SIQTIDMSFNQLSGSIPAE 464
++ + +S N SG+IPAE
Sbjct: 512 NLAILKLSNNSFSGNIPAE 530
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 136/307 (44%), Gaps = 48/307 (15%)
Query: 52 GEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQ 111
G I S+G L L+ + N L G+IP E+ +L + L N L G+IP +S
Sbjct: 429 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 488
Query: 112 LEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALT 171
L +++L NN+LTG IP + ++ NL L L+ N +G IP + L +L L N
Sbjct: 489 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 548
Query: 172 GMLSPDMCQLTG------------------------------LWYFDVRGNNLT------ 195
G + M + +G L + +R L
Sbjct: 549 GTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 608
Query: 196 ----------GTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQ-VATLSLQGNKLTGK 244
G + N S LD+SYN ++G IP IG + + L+L N ++G
Sbjct: 609 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 668
Query: 245 IPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLS 304
IP+ +G ++ L +LDLS N+L G IP + L+ ++ L N L+GPI PE+G
Sbjct: 669 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETFP 727
Query: 305 YLQLQNN 311
+ NN
Sbjct: 728 PAKFLNN 734
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%)
Query: 51 GGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLK 110
GG SP+ + ++ +D N L+G IP EIG+ L + L N + G IP + L+
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 677
Query: 111 QLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRL 153
L L+L +N+L G IP ++ + L +DL+ N L+G IP +
Sbjct: 678 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 200/384 (52%), Gaps = 35/384 (9%)
Query: 63 NLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQL 122
NL+ +D N + IP +G+C +L H+++S N L GD +IS +L+ LN+ +NQ
Sbjct: 201 NLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 123 TGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWN-EVLQYLGLRGNALTGMLSPDMCQL 181
GPIP + +L+ L LA N+ TGEIP + + L L L GN G + P
Sbjct: 260 VGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317
Query: 182 TGLWYFDVRGNNLTGTIP-DSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
+ L + NN +G +P D++ ++LD+S+N+ +GE+P ++
Sbjct: 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL-------------- 363
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGK-----LYLHGNKLTGPIPP 295
L +L LDLS N GPI P NL K LYL N TG IPP
Sbjct: 364 --------TNLSASLLTLDLSSNNFSGPILP---NLCQNPKNTLQELYLQNNGFTGKIPP 412
Query: 296 ELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFN 355
L N S+L L L N L GTIP+ LG L +L +L L N LEG IP + L
Sbjct: 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472
Query: 356 VHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPA 415
+ N L+G IPS N +L +++LS N G++P +GR+ NL L LS N+FSG++PA
Sbjct: 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Query: 416 SIGDLEHLLTLNLSRNHLNGLLPA 439
+GD L+ L+L+ N NG +PA
Sbjct: 533 ELGDCRSLIWLDLNTNLFNGTIPA 556
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 225/454 (49%), Gaps = 52/454 (11%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEI-GNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKN 119
L++LQ + NK TG+IPD + G C +L ++LS N YG +P LE L L +
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 120 NQLTGPIP-STLTQIPNLKTLDLARNQLTGEIPR-LIYWNEVLQYLGLRGNALTGMLSPD 177
N +G +P TL ++ LK LDL+ N+ +GE+P L + L L L N +G + P+
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 178 MCQ--LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFL-QVATL 234
+CQ L ++ N TG IP ++ NC+ L +S+N ++G IP ++G L ++ L
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 235 SLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIP 294
L N L G+IP+ + ++ L L L N+L G IP L N + + L N+LTG IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 295 PELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNI---SSCTAL 351
+G + L+ L+L NN G IPAELG L L+L N G IP + S A
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA 567
Query: 352 N---------------QFNVHG---------------NRLS-------------GAIPSS 368
N + HG NRLS G +
Sbjct: 568 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627
Query: 369 FRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNL 428
F N GS+ +L++S N G +P E+G + L L+L N+ SGS+P +GDL L L+L
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 687
Query: 429 SRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIP 462
S N L+G +P L + ID+S N LSG IP
Sbjct: 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 210/414 (50%), Gaps = 18/414 (4%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIG-----NCGSLVHIELSDNSLYGDIPFSISKLKQLEFL 115
L +L+ +D N ++G + +G CG L H+ +S N + GD+ +S+ LEFL
Sbjct: 150 LNSLEVLDLSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFL 205
Query: 116 NLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLS 175
++ +N + IP L L+ LD++ N+L+G+ R I L+ L + N G +
Sbjct: 206 DVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Query: 176 PDMCQLTGLWYFDVRGNNLTGTIPDSI-GNCTSFEILDISYNQITGEIPYNIGFLQVATL 234
P L L Y + N TG IPD + G C + LD+S N G +P G +
Sbjct: 265 P--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 322
Query: 235 SLQG-NKLTGKIP-EVIGLMQALAVLDLSENELVGPIPPILGNLSYTG-KLYLHGNKLTG 291
N +G++P + + M+ L VLDLS NE G +P L NLS + L L N +G
Sbjct: 323 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382
Query: 292 PIPPELGNMSK--LSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCT 349
PI P L K L L LQNN G IP L +L L+L+ N L G IP ++ S +
Sbjct: 383 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442
Query: 350 ALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNF 409
L + N L G IP + +L L L N+ G++P+ L NL+ + LS N
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 502
Query: 410 SGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPA 463
+G +P IG LE+L L LS N +G +PAE G+ RS+ +D++ N +G+IPA
Sbjct: 503 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 216/439 (49%), Gaps = 45/439 (10%)
Query: 64 LQSIDFQGNKLTGQIPD--EIGNCGSLVHIELSDNSLYGDIPFSIS---KLKQLEFLNLK 118
L S+D N L+G + +G+C L + +S N+L D P +S KL LE L+L
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLS 159
Query: 119 NNQLTGP--IPSTLTQ-IPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNAL-TGML 174
N ++G + L+ LK L ++ N+++G++ N L++L + N TG+
Sbjct: 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVN--LEFLDVSSNNFSTGI- 216
Query: 175 SPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATL 234
P + + L + D+ GN L+G +I CT ++L+IS NQ G IP + + L
Sbjct: 217 -PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP-LPLKSLQYL 274
Query: 235 SLQGNKLTGKIPEVI-GLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPI 293
SL NK TG+IP+ + G L LDLS N G +PP G+ S L L N +G +
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 294 PPE-LGNMSKLSYLQLQNNQLVGTIPAELGKLE-QLFELNLADNNLEGPI---------- 341
P + L M L L L N+ G +P L L L L+L+ NN GPI
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 342 ----------------PHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNF 385
P +S+C+ L ++ N LSG IPSS +L L L L N
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 386 KGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLR 445
+G++P EL + L+TL L N+ +G +P+ + + +L ++LS N L G +P G L
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514
Query: 446 SIQTIDMSFNQLSGSIPAE 464
++ + +S N SG+IPAE
Sbjct: 515 NLAILKLSNNSFSGNIPAE 533
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 136/307 (44%), Gaps = 48/307 (15%)
Query: 52 GEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQ 111
G I S+G L L+ + N L G+IP E+ +L + L N L G+IP +S
Sbjct: 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 491
Query: 112 LEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALT 171
L +++L NN+LTG IP + ++ NL L L+ N +G IP + L +L L N
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 551
Query: 172 GMLSPDMCQLTG------------------------------LWYFDVRGNNLT------ 195
G + M + +G L + +R L
Sbjct: 552 GTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 611
Query: 196 ----------GTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQ-VATLSLQGNKLTGK 244
G + N S LD+SYN ++G IP IG + + L+L N ++G
Sbjct: 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 671
Query: 245 IPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLS 304
IP+ +G ++ L +LDLS N+L G IP + L+ ++ L N L+GPI PE+G
Sbjct: 672 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETFP 730
Query: 305 YLQLQNN 311
+ NN
Sbjct: 731 PAKFLNN 737
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%)
Query: 51 GGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLK 110
GG SP+ + ++ +D N L+G IP EIG+ L + L N + G IP + L+
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680
Query: 111 QLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRL 153
L L+L +N+L G IP ++ + L +DL+ N L+G IP +
Sbjct: 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 157/278 (56%), Gaps = 11/278 (3%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
D+ +T N K+++G+G VYK L++ +A+K+ + + EFETE+ET+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGL 728
RH ++VSL G+ +L Y YM NG+L L+G + + WE RL+I +GAA+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYID 787
YLH IIHRDVKS NIL+DENF ++DFGI+ + H V GT+GYID
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 788 PEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV-----DNESNLHQLIMSKADDNTVMEAV 842
PEY RL EKSDVYSFG+VL E+L + A+ NL + + ++ + + V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
DP ++ + ++RK A+ C +RP+M +V
Sbjct: 270 DPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 157/278 (56%), Gaps = 11/278 (3%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
D+ +T N K+++G+G VYK L++ +A+K+ + + EFETE+ET+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGL 728
RH ++VSL G+ +L Y YM NG+L L+G + + WE RL+I +GAA+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYID 787
YLH IIHRDVKS NIL+DENF ++DFGI+ + H V GT+GYID
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 788 PEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNE-----SNLHQLIMSKADDNTVMEAV 842
PEY RL EKSDVYSFG+VL E+L + A+ NL + + ++ + + V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
DP ++ + ++RK A+ C +RP+M +V
Sbjct: 270 DPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 151/297 (50%), Gaps = 22/297 (7%)
Query: 602 DMAIHTFD--DIMRSTENLSEKYI------VGYGASSTVYKCALKNSRPIAVKKLYNQYP 653
D H+F ++ T N E+ I +G G VYK + N+ +AVKKL
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVD 67
Query: 654 HNLRE----FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKK 709
E F+ E++ + +H N+V L G++ L Y YM NGSL D L
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
L W R KIA GAA G+ +LH + + IHRD+KS+NIL+DE F A +SDFG+AR
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 770 T-AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
A + ++GT Y+ PE A + KSD+YSFG+VLLEI+TG AVD E QL
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQL 242
Query: 829 IMSKADDNTVMEAVDPEV---SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
++ ++ E + + D ++V + +A C ++RP +++V +
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 150/297 (50%), Gaps = 22/297 (7%)
Query: 602 DMAIHTFD--DIMRSTENLSEKYI------VGYGASSTVYKCALKNSRPIAVKKLYNQYP 653
D H+F ++ T N E+ I +G G VYK + N+ +AVKKL
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVD 67
Query: 654 HNLRE----FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKK 709
E F+ E++ + +H N+V L G++ L Y YM NGSL D L
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
L W R KIA GAA G+ +LH + + IHRD+KS+NIL+DE F A +SDFG+AR
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 770 T-AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
A ++GT Y+ PE A + KSD+YSFG+VLLEI+TG AVD E QL
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQL 242
Query: 829 IMSKADDNTVMEAVDPEV---SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
++ ++ E + + D ++V + +A C ++RP +++V +
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 150/297 (50%), Gaps = 22/297 (7%)
Query: 602 DMAIHTFD--DIMRSTENLSEKYI------VGYGASSTVYKCALKNSRPIAVKKLYNQYP 653
D H+F ++ T N E+ I +G G VYK + N+ +AVKKL
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVD 61
Query: 654 HNLRE----FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKK 709
E F+ E++ + +H N+V L G++ L Y YM NGSL D L
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
L W R KIA GAA G+ +LH + + IHRD+KS+NIL+DE F A +SDFG+AR
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 770 T-AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
A ++GT Y+ PE A + KSD+YSFG+VLLEI+TG AVD E QL
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQL 236
Query: 829 IMSKADDNTVMEAVDPEV---SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
++ ++ E + + D ++V + +A C ++RP +++V +
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 607 TFDDIMRSTENLSEKYI------VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE-- 658
+F ++ T N E+ I G G VYK + N+ +AVKKL E
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELK 65
Query: 659 --FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWET 716
F+ E++ +H N+V L G++ L Y Y NGSL D L L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 717 RLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT-AMPHA 775
R KIA GAA G+ +LH + + IHRD+KS+NIL+DE F A +SDFG+AR A
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADD 835
+ ++GT Y PE A + KSD+YSFG+VLLEI+TG AVD E QL++ ++
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEE 240
Query: 836 NTVMEAVDPEV---SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
E + D ++V + +A C ++RP +++V +
Sbjct: 241 IEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 7/207 (3%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLR--EFETELETIG 667
DI N+ EK +G G+ TV++ S +AVK L Q H R EF E+ +
Sbjct: 33 DIPWCDLNIKEK--IGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 668 SIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQG 727
+RH NIV G P + +Y+ GSL+ LLH + +LD RL +A A+G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYID 787
+ YLH+ NP I+HRD+KS N+L+D+ + + DFG++R + S GT ++
Sbjct: 150 MNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF-LXSKXAAGTPEWMA 207
Query: 788 PEYAHTSRLNEKSDVYSFGIVLLEILT 814
PE NEKSDVYSFG++L E+ T
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 117/219 (53%), Gaps = 17/219 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLR--EFETELETIG 667
DI N+ EK +G G+ TV++ S +AVK L Q H R EF E+ +
Sbjct: 33 DIPWCDLNIKEK--IGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 668 SIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQG 727
+RH NIV G P + +Y+ GSL+ LLH + +LD RL +A A+G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV-----LGT 782
+ YLH+ NP I+HR++KS N+L+D+ + + DFG++R ASTF+ GT
Sbjct: 150 MNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGT 202
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDN 821
++ PE NEKSDVYSFG++L E+ T ++ N
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 26/220 (11%)
Query: 268 PIPPILGNLSYTGKLYLHG-NKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ 326
PIP L NL Y LY+ G N L GPIPP + +++L YL + + + G IP L +++
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 327 LFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSL-TYLNLSRNNF 385
L L+ + N L G +P +ISS L GNR+SGAIP S+ + L T + +SRN
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 386 KGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRN-------------H 432
GK+P +NL +DLS N G G ++ ++L++N +
Sbjct: 187 TGKIPPTFAN-LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKN 245
Query: 433 LNGL----------LPAEFGNLRSIQTIDMSFNQLSGSIP 462
LNGL LP L+ + ++++SFN L G IP
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 102 IPFSISKLKQLEFLNLKN-NQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVL 160
IP S++ L L FL + N L GPIP + ++ L L + ++G IP + + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 161 QYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITG 220
L NAL+G L P + L L GN ++G IPDS G SF L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG---SFSKL--------- 175
Query: 221 EIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTG 280
++++ N+LTGKIP + LA +DLS N L G + G+ T
Sbjct: 176 ----------FTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQ 224
Query: 281 KLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGP 340
K++L N L + ++G L+ L L+NN++ GT+P L +L+ L LN++ NNL G
Sbjct: 225 KIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 341 IPH 343
IP
Sbjct: 284 IPQ 286
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 20/282 (7%)
Query: 1 MAIKASFSNLANVLLDWDDVHNSDFC--SWRGVFCDXXXXXXXXXXXXXXXXG-GEISPS 57
+ IK N L W + +D C +W GV CD + P
Sbjct: 12 LQIKKDLGN-PTTLSSW--LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPI 68
Query: 58 IGDLRNLQSIDFQG----NKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLE 113
L NL ++F N L G IP I L ++ ++ ++ G IP +S++K L
Sbjct: 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128
Query: 114 FLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLI-YWNEVLQYLGLRGNALTG 172
L+ N L+G +P +++ +PNL + N+++G IP ++++ + + N LTG
Sbjct: 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188
Query: 173 MLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVA 232
+ P L L + D+ N L G G+ + + + ++ N + +++G + ++
Sbjct: 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA----FDLGKVGLS 243
Query: 233 T----LSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIP 270
L L+ N++ G +P+ + ++ L L++S N L G IP
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+VG GA V K + ++ +A+K++ ++ + F EL + + H NIV L+G L
Sbjct: 16 VVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P L +Y GSL+++LHG + + +QG+AYLH +IHR
Sbjct: 73 NPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 743 DVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
D+K N+L+ + DFG A I T M T G+ ++ PE S +EK D
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTACDIQTHM----TNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 802 VYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQ 861
V+S+GI+L E++T +K D IM + T + + +
Sbjct: 187 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK----------NLPKPIES 236
Query: 862 LALLCTKRYPSERPTMQEVAR 882
L C + PS+RP+M+E+ +
Sbjct: 237 LMTRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+VG GA V K + ++ +A+K++ ++ + F EL + + H NIV L+G L
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P L +Y GSL+++LHG + + +QG+AYLH +IHR
Sbjct: 72 NPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 743 DVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
D+K N+L+ + DFG A I T M T G+ ++ PE S +EK D
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTACDIQTHM----TNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 802 VYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQ 861
V+S+GI+L E++T +K D IM + T + + +
Sbjct: 186 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK----------NLPKPIES 235
Query: 862 LALLCTKRYPSERPTMQEVAR 882
L C + PS+RP+M+E+ +
Sbjct: 236 LMTRCWSKDPSQRPSMEEIVK 256
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 131/270 (48%), Gaps = 24/270 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + + K + + + IA A+G+ YLH IIHRD
Sbjct: 80 PQLAIV-TQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + ++ P++S V + ++
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQII-----EMVGRGSLSPDLSK--VRSNCPKRM 246
Query: 860 FQLALLCTKRYPSERPT-------MQEVAR 882
+L C K+ ERP+ ++E+AR
Sbjct: 247 KRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ N +A+K + + + +F E E + + H +V L+G L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
L +++M +G L D L +++ ET L + + +G+AYL C +IHRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVY 803
+ + N L+ EN +SDFG+ R + +ST + + PE SR + KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 804 SFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
SFG+++ E+ + GK +N SN + D +T P ++ T V +Q+
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSEVV----EDISTGFRLYKPRLASTHV--------YQI 236
Query: 863 ALLCTKRYPSERPTMQEVAR 882
C K P +RP + R
Sbjct: 237 MNHCWKERPEDRPAFSRLLR 256
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ N +A+K + + + +F E E + + H +V L+G L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
L +++M +G L D L +++ ET L + + +G+AYL C +IHRD
Sbjct: 72 QAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVY 803
+ + N L+ EN +SDFG+ R + +ST + + PE SR + KSDV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 804 SFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
SFG+++ E+ + GK +N SN + D +T P ++ T V +Q+
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSEVV----EDISTGFRLYKPRLASTHV--------YQI 234
Query: 863 ALLCTKRYPSERPTMQEVAR 882
C K P +RP + R
Sbjct: 235 MNHCWKERPEDRPAFSRLLR 254
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ N +A+K + + + +F E E + + H +V L+G L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
L +++M +G L D L +++ ET L + + +G+AYL C +IHRD
Sbjct: 94 QAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVY 803
+ + N L+ EN +SDFG+ R + +ST + + PE SR + KSDV+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 804 SFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
SFG+++ E+ + GK +N SN + D +T P ++ T V +Q+
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSEVV----EDISTGFRLYKPRLASTHV--------YQI 256
Query: 863 ALLCTKRYPSERPTMQEVAR 882
C K P +RP + R
Sbjct: 257 MNHCWKERPEDRPAFSRLLR 276
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 24/270 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+ +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + + K + + + IA A+G+ YLH IIHRD
Sbjct: 92 PQLAIV-TQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 744 VKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + ++ P++S V + ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQII-----EMVGRGSLSPDLSK--VRSNCPKRM 258
Query: 860 FQLALLCTKRYPSERPT-------MQEVAR 882
+L C K+ ERP+ ++E+AR
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 131/270 (48%), Gaps = 24/270 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + + K + + + IA A+G+ YLH IIHRD
Sbjct: 92 PQLAIV-TQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 744 VKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + ++ P++S V + ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQII-----EMVGRGSLSPDLSK--VRSNCPKRM 258
Query: 860 FQLALLCTKRYPSERPT-------MQEVAR 882
+L C K+ ERP+ ++E+AR
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ N +A+K + + + +F E E + + H +V L+G L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
L +++M +G L D L +++ ET L + + +G+AYL C +IHRD
Sbjct: 77 QAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVY 803
+ + N L+ EN +SDFG+ R + +ST + + PE SR + KSDV+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 804 SFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
SFG+++ E+ + GK +N SN + D +T P ++ T V +Q+
Sbjct: 192 SFGVLMWEVFSEGKIPYENRSNSEVV----EDISTGFRLYKPRLASTHV--------YQI 239
Query: 863 ALLCTKRYPSERPTMQEVAR 882
C + P +RP + R
Sbjct: 240 MNHCWRERPEDRPAFSRLLR 259
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 93.6 bits (231), Expect = 4e-19, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 116/228 (50%), Gaps = 24/228 (10%)
Query: 612 MRSTENLSEKY----IVGYGASSTVYKCA-LKNSRPIAVKKLYNQY---PHNLREFETEL 663
M + +LS++Y I+G+G S V+ L++ R +AVK L P F E
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 664 ETIGSIRHRNIVSLH--GYALSPYGNL--LFYDYMVNGSLWDLLH--GPSKKVKLDWETR 717
+ ++ H IV+++ G A +P G L + +Y+ +L D++H GP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRA 118
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA-- 775
+++ A Q L + H + IIHRDVK +NILI + DFGIAR I +
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
+ V+GT Y+ PE A ++ +SDVYS G VL E+LTG+ +S
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+ +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 76 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 243
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 244 -RLMAECLKKKRDERPLFPQI 263
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 93.2 bits (230), Expect = 7e-19, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 24/228 (10%)
Query: 612 MRSTENLSEKY----IVGYGASSTVYKCA-LKNSRPIAVKKLYNQY---PHNLREFETEL 663
M + +LS++Y I+G+G S V+ L++ R +AVK L P F E
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 664 ETIGSIRHRNIVSLH--GYALSPYGNL--LFYDYMVNGSLWDLLH--GPSKKVKLDWETR 717
+ ++ H IV+++ G A +P G L + +Y+ +L D++H GP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRA 118
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS- 776
+++ A Q L + H + IIHRDVK +NI+I + DFGIAR I + +
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 777 -TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
V+GT Y+ PE A ++ +SDVYS G VL E+LTG+ +S
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 93.2 bits (230), Expect = 7e-19, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 24/228 (10%)
Query: 612 MRSTENLSEKY----IVGYGASSTVYKCA-LKNSRPIAVKKLYNQY---PHNLREFETEL 663
M + +LS++Y I+G+G S V+ L++ R +AVK L P F E
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 664 ETIGSIRHRNIVSLH--GYALSPYGNL--LFYDYMVNGSLWDLLH--GPSKKVKLDWETR 717
+ ++ H IV+++ G A +P G L + +Y+ +L D++H GP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRA 118
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS- 776
+++ A Q L + H + IIHRDVK +NI+I + DFGIAR I + +
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 777 -TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
V+GT Y+ PE A ++ +SDVYS G VL E+LTG+ +S
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 76 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 243
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 244 -RLMAECLKKKRDERPLFPQI 263
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 104 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 271
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 272 -RLMAECLKKKRDERPLFPQI 291
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 81 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 248
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 249 -RLMAECLKKKRDERPLFPQI 268
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 78 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 131
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 245
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 246 -RLMAECLKKKRDERPLFPQI 265
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 81 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 248
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 249 -RLMAECLKKKRDERPLFPQI 268
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 103 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 156
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 270
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 271 -RLMAECLKKKRDERPLFPQI 290
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 19/260 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ N +A+K + + + +F E E + + H +V L+G L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
L ++M +G L D L +++ ET L + + +G+AYL C +IHRD
Sbjct: 75 QAPICLVTEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVY 803
+ + N L+ EN +SDFG+ R + +ST + + PE SR + KSDV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 804 SFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
SFG+++ E+ + GK +N SN + D +T P ++ T V +Q+
Sbjct: 190 SFGVLMWEVFSEGKIPYENRSNSEVV----EDISTGFRLYKPRLASTHV--------YQI 237
Query: 863 ALLCTKRYPSERPTMQEVAR 882
C + P +RP + R
Sbjct: 238 MNHCWRERPEDRPAFSRLLR 257
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 618 LSEKYIV----GYGASSTVY--KCALKNSRPIAVKKLY---NQYPHNLREFETELETIGS 668
++E+Y + G G STVY + + N + +A+K ++ + L+ FE E+
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLL--HGPSKKVKLDWETRLKIAVGAAQ 726
+ H+NIVS+ L +Y+ +L + + HGP L +T +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-----LSVDTAINFTNQILD 122
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
G+ + H + RI+HRD+K NILID N + DFGIA+ + + VLGT+ Y
Sbjct: 123 GIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
PE A +E +D+YS GIVL E+L G+ + E+
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 76 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 744 VKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 243
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 244 -RLMAECLKKKRDERPLFPQI 263
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G + V+ +AVK L Q + F E + +
Sbjct: 9 EVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 65
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 66 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 123
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A A I + PE
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 233
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 234 NCPE-----ELYQLMRLCWKERPEDRPTF 257
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 19/260 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ N +A+K + + + +F E E + + H +V L+G L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
L +++M +G L D L +++ ET L + + +G+AYL +IHRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRD 128
Query: 744 VKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVY 803
+ + N L+ EN +SDFG+ R + +ST + + PE SR + KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 804 SFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
SFG+++ E+ + GK +N SN + D +T P ++ T V +Q+
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSEVV----EDISTGFRLYKPRLASTHV--------YQI 236
Query: 863 ALLCTKRYPSERPTMQEVAR 882
C K P +RP + R
Sbjct: 237 MNHCWKERPEDRPAFSRLLR 256
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 104 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 744 VKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 271
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 272 -RLMAECLKKKRDERPLFPQI 291
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + + P L+ F+ E+ + RH NI+ GY+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
P ++ + SL+ LH + K + + IA AQG+ YLH IIHRD
Sbjct: 96 PQLAIV-TQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 149
Query: 744 VKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE---K 799
+KS+NI + E+ + DFG+A + H + G+I ++ PE N +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859
SDVY+FGIVL E++TG+ N +N Q+I + P++S + K
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----YLSPDLSKVRSNCPKAMK- 263
Query: 860 FQLALLCTKRYPSERPTMQEV 880
+L C K+ ERP ++
Sbjct: 264 -RLMAECLKKKRDERPLFPQI 283
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 24/228 (10%)
Query: 612 MRSTENLSEKY----IVGYGASSTVYKCA-LKNSRPIAVKKLYNQY---PHNLREFETEL 663
M + +LS++Y I+G+G S V+ L+ R +AVK L P F E
Sbjct: 21 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREA 80
Query: 664 ETIGSIRHRNIVSLH--GYALSPYGNL--LFYDYMVNGSLWDLLH--GPSKKVKLDWETR 717
+ ++ H IV+++ G A +P G L + +Y+ +L D++H GP + +
Sbjct: 81 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRA 135
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS- 776
+++ A Q L + H + IIHRDVK +NI+I + DFGIAR I + +
Sbjct: 136 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 777 -TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
V+GT Y+ PE A ++ +SDVYS G VL E+LTG+ +S
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 240
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 24/228 (10%)
Query: 612 MRSTENLSEKY----IVGYGASSTVYKCA-LKNSRPIAVKKLYNQY---PHNLREFETEL 663
M + +LS++Y I+G+G S V+ L+ R +AVK L P F E
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 664 ETIGSIRHRNIVSLH--GYALSPYGNL--LFYDYMVNGSLWDLLH--GPSKKVKLDWETR 717
+ ++ H IV+++ G A +P G L + +Y+ +L D++H GP + +
Sbjct: 64 QNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRA 118
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS- 776
+++ A Q L + H + IIHRDVK +NI+I + DFGIAR I + +
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 777 -TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
V+GT Y+ PE A ++ +SDVYS G VL E+LTG+ +S
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 24/228 (10%)
Query: 612 MRSTENLSEKY----IVGYGASSTVYKCA-LKNSRPIAVKKLYNQY---PHNLREFETEL 663
M + +LS++Y I+G+G S V+ L+ R +AVK L P F E
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 664 ETIGSIRHRNIVSLH--GYALSPYGNL--LFYDYMVNGSLWDLLH--GPSKKVKLDWETR 717
+ ++ H IV+++ G A +P G L + +Y+ +L D++H GP + +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRA 118
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS- 776
+++ A Q L + H + IIHRDVK +NI+I + DFGIAR I + +
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 777 -TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
V+GT Y+ PE A ++ +SDVYS G VL E+LTG+ +S
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 28/273 (10%)
Query: 618 LSEKYIVGYGASSTVYKCALKNSR-----PIAVKKLYNQYPHNLR-EFETELETIGSIRH 671
++ + ++G G VYK LK S P+A+K L Y R +F E +G H
Sbjct: 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 672 RNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYL 731
NI+ L G ++ +YM NG+L L K + + + G A G+ YL
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 732 HHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG---TIGYIDP 788
N +HRD+ + NIL++ N +SDFG++R + P A+ G I + P
Sbjct: 164 ---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD-PEATYTTSGGKIPIRWTAP 219
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847
E + SDV+SFGIV+ E++T G++ SN H+++ + D + +D +
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKAINDGFRLPTPMDCPSA 278
Query: 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ +QL + C ++ + RP ++
Sbjct: 279 I-----------YQLMMQCWQQERARRPKFADI 300
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 240
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + +A A G+AY+
Sbjct: 241 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 298
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 299 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 356 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESLHDL 413
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 414 MC---------QCWRKEPEERPTFE 429
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 323
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + +A A G+AY+
Sbjct: 324 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 381
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 382 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + D
Sbjct: 439 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESLHD- 495
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
L C ++ P ERPT +
Sbjct: 496 --------LMCQCWRKEPEERPTFE 512
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 240
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + +A A G+AY+
Sbjct: 241 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 298
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 299 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 356 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESLHDL 413
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 414 MC---------QCWRKEPEERPTFE 429
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 18 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 74
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 75 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 132
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 133 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 242
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 243 NCPE-----ELYQLMRLCWKERPEDRPTF 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 17 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 73
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 74 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 131
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 132 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 241
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 242 NCPE-----ELYQLMRLCWKERPEDRPTF 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 71
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 72 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 129
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 239
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 240 NCPE-----ELYQLMRLCWKERPEDRPTF 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 240
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + +A A G+AY+
Sbjct: 241 LVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 298
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 299 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 356 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESLHDL 413
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 414 MCQ---------CWRKEPEERPTFE 429
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 65
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 66 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 123
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 233
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 234 NCPE-----ELYQLMRLCWKERPEDRPTF 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 10 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 66
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 67 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 124
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 125 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 234
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 235 NCPE-----ELYQLMRLCWKERPEDRPTF 258
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 11 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 67
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 68 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 125
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 126 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 235
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 236 NCPE-----ELYQLMRLCWKERPEDRPTF 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P N+ F E + + +RH
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMSPEAFLQEAQVMKKLRHEK 241
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 242 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 299
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+ R I A I + PE A
Sbjct: 300 ---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALY 356
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 357 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESLHDL 414
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 415 MCQ---------CWRKDPEERPTFE 430
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 65
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 66 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 123
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 233
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 234 NCPE-----ELYQLMRLCWKERPEDRPTF 257
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 25/265 (9%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G+ TVYK + + K+ + P + F E+ + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 684 PYGNLLFYDYMVNGS-LWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
NL GS L+ LH ++ K + IA AQG+ YLH IIHR
Sbjct: 104 --DNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 743 DVKSSNILIDENFDAHLSDFGIA----RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
D+KS+NI + E + DFG+A R + T G++ ++ PE N
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPEVIRMQDNNP 213
Query: 799 ---KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+SDVYS+GIVL E++TG+ + +N Q+I P++S +
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG-----YASPDLSKLYKNCPK 268
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K +L C K+ ERP ++
Sbjct: 269 AMK--RLVADCVKKVKEERPLFPQI 291
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 19 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 75
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 76 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 133
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 134 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 243
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 244 NCPE-----ELYQLMRLCWKERPEDRPTF 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 65
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 66 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 123
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 233
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 234 NCPE-----ELYQLMRLCWKERPEDRPTF 257
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 4 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 60
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 61 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 118
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 119 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 228
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 229 NCPE-----ELYQLMRLCWKERPEDRPTF 252
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 71
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 72 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 129
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 239
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 240 NCPE-----ELYQLMRLCWKERPEDRPTF 263
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 64
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + +A A G+AY+
Sbjct: 65 LVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 122
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 123 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 179
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 180 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 237
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 238 MC---------QCWRKEPEERPTFE 253
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 14 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 70
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 71 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 128
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 129 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 238
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 239 NCPE-----ELYQLMRLCWKERPEDRPTF 262
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 133 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 187
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 188 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 120 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 174
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 109 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 163
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 164 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 105 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 159
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 612 MRSTENLSEKYI-----VGYGASSTVYKCALK-----NSRPIAVKKLYNQYPHNLREFET 661
MR E+++ +G G +V C +AVKKL + +LR+FE
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 662 ELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E+E + S++H NIV G Y+ L +Y+ GSL D L K ++D L+
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQ 118
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+G+ YL R IHRD+ + NIL++ + DFG+ + +P
Sbjct: 119 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 120 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 174
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 102 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 156
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 157 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 107 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 161
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 162 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 106 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 160
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 161 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 67
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + +A A G+AY+
Sbjct: 68 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 125
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 126 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 182
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 183 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 240
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 241 MC---------QCWRKEPEERPTFE 256
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 101 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 155
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 156 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 108 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 162
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 163 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 100 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 154
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 155 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L ++++ D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 105 DYLQAHAERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 159
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 102 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 156
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.9 bits (211), Expect = 9e-17, Method: Composition-based stats.
Identities = 77/265 (29%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + IRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKIRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
++ R T L E+ +G G V+ +AVK L Q + F E + +
Sbjct: 5 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 61
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H+ +V L+ ++ + +YM NGSL D L PS +KL L +A A+G+A
Sbjct: 62 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMA 119
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHR+++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 120 FIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L EI+T G+ +N ++ + M V P+
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRM--VRPD--- 229
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C + + +QL LC K P +RPT
Sbjct: 230 NCPE-----ELYQLMRLCWKERPEDRPTF 253
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +Y+ GSL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L K ++D L+ +G+ YL R IHR++ + NIL++ +
Sbjct: 103 DYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIG 157
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P + G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 158 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 131/277 (47%), Gaps = 28/277 (10%)
Query: 623 IVGYGASSTVYK--CALKNSRPIAVKKL-YNQYPHNLREFETELETIGSIRHRNIVSLHG 679
++G GA++ V CA K + +A+K++ + ++ E E++ + H NIVS +
Sbjct: 17 VIGSGATAVVQAAYCAPKKEK-VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLH-----GPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
+ L + GS+ D++ G K LD T I +GL YLH +
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM-----PHASTFVLGTIGYIDPE 789
IHRDVK+ NIL+ E+ ++DFG++ + T TFV GT ++ PE
Sbjct: 136 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPE 191
Query: 790 YAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME--AVDPEV 846
R + K+D++SFGI +E+ TG + L+++ +D +E D E+
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM 251
Query: 847 SVTCVDLSAVRKTFQLAL-LCTKRYPSERPTMQEVAR 882
L K+F+ + LC ++ P +RPT E+ R
Sbjct: 252 ------LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 63
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 64 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 121
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 122 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 179 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 236
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 237 MC---------QCWRKDPEERPTFE 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 65
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 66 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 123
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 124 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 180
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 181 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 238
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 239 MC---------QCWRKDPEERPTFE 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 71
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + ++ A G+AY+
Sbjct: 72 LVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER 129
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 130 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 186
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 187 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 244
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 245 MC---------QCWRKEPEERPTFE 260
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 131/277 (47%), Gaps = 28/277 (10%)
Query: 623 IVGYGASSTVYK--CALKNSRPIAVKKL-YNQYPHNLREFETELETIGSIRHRNIVSLHG 679
++G GA++ V CA K + +A+K++ + ++ E E++ + H NIVS +
Sbjct: 22 VIGSGATAVVQAAYCAPKKEK-VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLH-----GPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
+ L + GS+ D++ G K LD T I +GL YLH +
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA-----MPHASTFVLGTIGYIDPE 789
IHRDVK+ NIL+ E+ ++DFG++ + T TFV GT ++ PE
Sbjct: 141 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPE 196
Query: 790 YAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA--VDPEV 846
R + K+D++SFGI +E+ TG + L+++ +D +E D E+
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM 256
Query: 847 SVTCVDLSAVRKTFQLAL-LCTKRYPSERPTMQEVAR 882
L K+F+ + LC ++ P +RPT E+ R
Sbjct: 257 ------LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 71
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G + K L + ++ A G+AY+
Sbjct: 72 LVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER 129
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 130 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALY 186
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 187 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 244
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 245 MC---------QCWRKEPEERPTFE 260
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 23/258 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRNIVSLHGYA 681
+G G V+ + +A+K L P + F E + + ++H +V L+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYA-V 72
Query: 682 LSPYGNLLFYDYMVNGSLWDLLH-GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740
+S + +YM GSL D L G + +KL + +A A G+AY+ I
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP--NLVDMAAQVAAGMAYIERM---NYI 127
Query: 741 HRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKS 800
HRD++S+NIL+ ++DFG+AR I A I + PE A R KS
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 801 DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860
DV+SFGI+L E++T + + ++ V+E V+ + C +
Sbjct: 188 DVWSFGILLTELVTKGR----------VPYPGMNNREVLEQVERGYRMPCPQDCPI-SLH 236
Query: 861 QLALLCTKRYPSERPTMQ 878
+L + C K+ P ERPT +
Sbjct: 237 ELMIHCWKKDPEERPTFE 254
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM GSL D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD+ ++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHG--YALSPYGNLLFYDYMVNGSLW 700
+AVKKL + +LR+FE E+E + S++H NIV G Y+ L +++ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
+ L K ++D L+ +G+ YL R IHRD+ + NIL++ +
Sbjct: 105 EYLQ--KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 159
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+ + +P G I + PE S+ + SDV+SFG+VL E+ T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 624 VGYGASSTVYKCALKNSRP------IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSL 677
+G GA V+ N P +AVK L + ++F+ E E + +++H +IV
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 678 HGYALSPYGNLLFYDYMVNGSLWDLL--HGPSKKVKLDWETR-----------LKIAVGA 724
+G ++ ++YM +G L L HGP + +D + R L IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTI 783
A G+ YL + +HRD+ + N L+ N + DFG++R + T + I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAV 842
++ PE + +SDV+SFG++L EI T GK+ SN ++ V+E
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECITQGRVLER- 256
Query: 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
P V ++ + + L C +R P +R ++E+ +
Sbjct: 257 -PRV--------CPKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.2 bits (204), Expect = 6e-16, Method: Composition-based stats.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM G L D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 24/215 (11%)
Query: 624 VGYGASSTVYKCAL-KNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNIV 675
+G G V+K L K+ +A+K L + +EF+ E+ + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L+G +P + +++ G L+ L + +K W +L++ + A G+ Y+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIALGIEYMQNQ- 141
Query: 736 NPRIIHRDVKSSNILI---DENFD--AHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
NP I+HRD++S NI + DEN A ++DFG+++ H+ + +LG ++ PE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPET 197
Query: 791 --AHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
A EK+D YSF ++L ILTG+ D S
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 21/265 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL--REFETELETIGSIRHRN 673
E+L + +G G V+ + +A+K L P + F E + + +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEK 74
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+V L+ +S + +YM G L D L G K L + +A A G+AY+
Sbjct: 75 LVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD++++NIL+ EN ++DFG+AR I A I + PE A
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853
R KSDV+SFGI+L E LT K V +++ ++ + + M PE + DL
Sbjct: 190 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDL 247
Query: 854 SAVRKTFQLALLCTKRYPSERPTMQ 878
C ++ P ERPT +
Sbjct: 248 MC---------QCWRKDPEERPTFE 263
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 34/295 (11%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRP------IAVKKLYNQYPHNLR 657
A+ TF ++ N+ K +G GA V+ N P +AVK L + + +
Sbjct: 2 AMDTFVQHIKR-HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK 60
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLL--HGPSK------- 708
+F E E + +++H +IV +G + ++ ++YM +G L L HGP
Sbjct: 61 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN 120
Query: 709 -KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767
+L L IA A G+ YL + +HRD+ + N L+ EN + DFG++R
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD 177
Query: 768 I-PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNL 825
+ T + I ++ PE + +SDV+S G+VL EI T GK+ SN
Sbjct: 178 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN- 236
Query: 826 HQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
N V+E + + V + ++ ++L L C +R P R ++ +
Sbjct: 237 ----------NEVIECIT-QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 624 VGYGASSTVYKCAL-KNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNIV 675
+G G V+K L K+ +A+K L + +EF+ E+ + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L+G +P + +++ G L+ L + +K W +L++ + A G+ Y+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIALGIEYMQNQ- 141
Query: 736 NPRIIHRDVKSSNILI---DENFD--AHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
NP I+HRD++S NI + DEN A ++DFG ++ H+ + +LG ++ PE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPET 197
Query: 791 --AHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
A EK+D YSF ++L ILTG+ D S
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG+AR + A T
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 29/234 (12%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKL-------YNQYPHNLREFETELETIGSI 669
L+ + I+G G VY+ A +AVK +Q N+R+ E + +
Sbjct: 8 ELTLEEIIGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIENVRQ---EAKLFAML 63
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H NI++L G L L ++ G L +L G K++ D + AV A+G+
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG--KRIPPD--ILVNWAVQIARGMN 119
Query: 730 YLHHDCNPRIIHRDVKSSNILI---DENFD-----AHLSDFGIARCIPTAMPHASTFVLG 781
YLH + IIHRD+KSSNILI EN D ++DFG+AR ++ G
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA---G 176
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK---KAVDNESNLHQLIMSK 832
++ PE S ++ SDV+S+G++L E+LTG+ + +D + + + M+K
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 152 MLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 23 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L K D + +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR------KHDAQFTVI 135
Query: 720 IAVGAAQGLAY-LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
VG +G+A + + + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 779 VLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADD 835
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------- 244
Query: 836 NTVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 245 QDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 288
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 621 KYIVGYGASSTVYKCALKNSRP------IAVKKLYNQYPHNLREFETELETIGSIRHRNI 674
K+ +G GA V+ N P +AVK L ++F+ E E + ++H++I
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 675 VSLHGYALSPYGNLLFYDYMVNGSLWDLL--HGPSKKVKLDWE----------TRLKIAV 722
V G L+ ++YM +G L L HGP K+ E L +A
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLG 781
A G+ YL +HRD+ + N L+ + + DFG++R I T +
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL-IMSKADDNTVM 839
I ++ PE + +SDV+SFG+VL EI T GK+ SN + +++ +
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 282
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A PEV + + C +R P +R ++++V
Sbjct: 283 RACPPEV-------------YAIMRGCWQREPQQRHSIKDV 310
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L K D + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR------KHDAQFTVI 118
Query: 720 IAVGAAQGLAY-LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
VG +G+A + + + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 779 VLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADD 835
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------- 227
Query: 836 NTVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 228 QDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 271
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 624 VGYGASSTVYKCAL-KNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNIV 675
+G G V+K L K+ +A+K L + +EF+ E+ + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L+G +P + +++ G L+ L + +K W +L++ + A G+ Y+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIALGIEYMQNQ- 141
Query: 736 NPRIIHRDVKSSNILI---DENFD--AHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
NP I+HRD++S NI + DEN A ++DF +++ H+ + +LG ++ PE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPET 197
Query: 791 --AHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
A EK+D YSF ++L ILTG+ D S
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG+ R + A T
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 33 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 149
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 150 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 255
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 256 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 298
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ +YM NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 20/256 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ NS +AVK L +++ F E + +++H +V L+
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 684 PYGNLLFYDYMVNGSLWDLLHGPSK-KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM GSL D L KV L + + A+G+AY+ IHR
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERK---NYIHR 134
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D++++N+L+ E+ ++DFG+AR I A I + PE + KSDV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 803 YSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQ 861
+SFGI+L EI+T GK +N +M+ M V+ C D + +
Sbjct: 195 WSFGILLYEIVTYGKIPYPGRTNAD--VMTALSQGYRMPRVE-----NCPD-----ELYD 242
Query: 862 LALLCTKRYPSERPTM 877
+ +C K ERPT
Sbjct: 243 IMKMCWKEKAEERPTF 258
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 606 HTFDDIMRSTENLSEKY---------IVGYGASSTVYKCALK----NSRPIAVKKLYNQY 652
HT+++ R+ + + + I+G G S V L+ P+A+K L Y
Sbjct: 30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY 89
Query: 653 -PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVK 711
R+F +E +G H NI+ L G ++ +YM NGSL L +
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
Query: 712 LDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771
+ + VGA G+ YL + +HRD+ + N+L+D N +SDFG++R +
Sbjct: 150 IMQLVGMLRGVGA--GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 772 MPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
A T G I + PE + SDV+SFG+V+ E+L G++ N +N +
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RD 262
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
++S ++ + A + QL L C + ++RP ++
Sbjct: 263 VISSVEEGYRLPA----------PMGCPHALHQLMLDCWHKDRAQRPRFSQI 304
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 606 HTFDDIMRSTENLSEKY---------IVGYGASSTVYKCALK----NSRPIAVKKLYNQY 652
HT+++ R+ + + + I+G G S V L+ P+A+K L Y
Sbjct: 30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY 89
Query: 653 -PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVK 711
R+F +E +G H NI+ L G ++ +YM NGSL L +
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
Query: 712 LDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771
+ + VGA G+ YL + +HRD+ + N+L+D N +SDFG++R +
Sbjct: 150 IMQLVGMLRGVGA--GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 772 MPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
A T G I + PE + SDV+SFG+V+ E+L G++ N +N +
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RD 262
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
++S ++ + A + QL L C + ++RP ++
Sbjct: 263 VISSVEEGYRLPA----------PMGCPHALHQLMLDCWHKDRAQRPRFSQI 304
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 131
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEXIEGRXH 188
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 235
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 236 EGARDLISRLLKHNPSQRPXLREV 259
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G ++ L K K D + A L+Y H +
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALSYCH---S 131
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 188
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 235
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREV 259
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 20/269 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
+I R + L +K +G G V+ NS +AVK L +++ F E + ++
Sbjct: 8 EIPRESIKLVKK--LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTL 64
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H +V L+ + ++M GSL D L + K+ + + A+G+A
Sbjct: 65 QHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKS-DEGGKVLLPKLIDFSAQIAEGMA 123
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
Y+ IHRD++++N+L+ E+ ++DFG+AR I A I + PE
Sbjct: 124 YIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KS+V+SFGI+L EI+T GK +N +MS M ++
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD--VMSALSQGYRMPRME----- 233
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTM 877
C D + + + +C K ERPT
Sbjct: 234 NCPD-----ELYDIMKMCWKEKAEERPTF 257
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ + M NGSL L K D + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR------KHDAQFTVI 147
Query: 720 IAVGAAQGLAY-LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
VG +G+A + + + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 779 VLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADD 835
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------- 256
Query: 836 NTVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 257 QDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 30/286 (10%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ + M NGSL L K D + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR------KHDAQFTVI 118
Query: 720 IAVGAAQGLAY-LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
VG +G+A + + + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 779 VLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADD 835
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------- 227
Query: 836 NTVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 228 QDVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 271
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 601 MDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREF 659
MD + +D +++ K+ +G G VY+ K S +AVK L + + EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E + I+H N+V L G + ++M G+L D L +++ +++ L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+A + + YL IHRD+ + N L+ EN ++DFG++R + A
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839
I + PE ++ + KSDV++FG++L EI T + +L Q + + + M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRM 236
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
E PE K ++L C + PS+RP+ E+
Sbjct: 237 ER--PE--------GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 98
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 152
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 209
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 256
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 257 EGARDLISRLLKHNPSQRPMLREV 280
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 621 KYIVGYGASSTVYKCALKNSRP------IAVKKLYNQYPHNLREFETELETIGSIRHRNI 674
K+ +G GA V+ N P +AVK L ++F+ E E + ++H++I
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 675 VSLHGYALSPYGNLLFYDYMVNGSLWDLL--HGPSKKV----------KLDWETRLKIAV 722
V G L+ ++YM +G L L HGP K+ L L +A
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLG 781
A G+ YL +HRD+ + N L+ + + DFG++R I T +
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL-IMSKADDNTVM 839
I ++ PE + +SDV+SFG+VL EI T GK+ SN + +++ +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 259
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A PEV + + C +R P +R ++++V
Sbjct: 260 RACPPEV-------------YAIMRGCWQREPQQRHSIKDV 287
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 621 KYIVGYGASSTVYKCALKNSRP------IAVKKLYNQYPHNLREFETELETIGSIRHRNI 674
K+ +G GA V+ N P +AVK L ++F+ E E + ++H++I
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 675 VSLHGYALSPYGNLLFYDYMVNGSLWDLL--HGPSKKV----------KLDWETRLKIAV 722
V G L+ ++YM +G L L HGP K+ L L +A
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLG 781
A G+ YL +HRD+ + N L+ + + DFG++R I T +
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL-IMSKADDNTVM 839
I ++ PE + +SDV+SFG+VL EI T GK+ SN + +++ +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 253
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A PEV + + C +R P +R ++++V
Sbjct: 254 RACPPEV-------------YAIMRGCWQREPQQRHSIKDV 281
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 76
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 130
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 187
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 234
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 235 EGARDLISRLLKHNPSQRPMLREV 258
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 601 MDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREF 659
MD + +D +++ K+ +G G VY+ K S +AVK L + + EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E + I+H N+V L G + ++M G+L D L +++ +++ L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+A + + YL IHRD+ + N L+ EN ++DFG++R + A
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839
I + PE ++ + KSDV++FG++L EI T + +L Q + + + M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRM 236
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
E PE K ++L C + PS+RP+ E+
Sbjct: 237 ER--PE--------GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 28/285 (9%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTV----YKCALKNSRPIAVKKLYNQYPHN-LREF 659
+H F + +T N+S +VG G V K K +A+K L Y R+F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E +G H NI+ L G ++ + M NGSL L + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI--QLVG 151
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ G A G+ YL + +HRD+ + NILI+ N +SDFG++R + A T
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 780 LGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
G I + PE + SDV+S+GIVL E+++ G++ SN
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----------Q 257
Query: 837 TVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AVD + +D A +QL L C ++ + RP +++
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 601 MDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREF 659
MD + +D +++ K+ +G G VY+ K S +AVK L + + EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E + I+H N+V L G + ++M G+L D L +++ +++ L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+A + + YL IHRD+ + N L+ EN ++DFG++R + A
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839
I + PE ++ + KSDV++FG++L EI T + +L Q + + + M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRM 236
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
E PE K ++L C + PS+RP+ E+
Sbjct: 237 ER--PE--------GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 601 MDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREF 659
MD + +D +++ K+ +G G VY+ K S +AVK L + + EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E + I+H N+V L G + ++M G+L D L +++ +++ L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+A + + YL IHRD+ + N L+ EN ++DFG++R + A
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839
I + PE ++ + KSDV++FG++L EI T + +L Q + + + M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRM 236
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
E PE K ++L C + PS+RP+ E+
Sbjct: 237 ER--PE--------GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 129
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 186
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 233
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 131
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 188
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 235
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREV 259
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 32/290 (11%)
Query: 602 DMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK----NSRPIAVKKLYNQYPHN-L 656
+ A+H F + ++ E+ ++G G V LK P+A+K L Y
Sbjct: 9 NQAVHEFAKEIEASCITIER-VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR 67
Query: 657 REFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWET 716
R+F E +G H NI+ L G ++ +YM NGSL L K D +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK------KNDGQF 121
Query: 717 RLKIAVGAAQGL-AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775
+ VG +G+ A + + + +HRD+ + NILI+ N +SDFG++R + P A
Sbjct: 122 TVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEA 180
Query: 776 STFVLG---TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMS 831
+ G I + PE + SDV+S+GIV+ E+++ G++ +N
Sbjct: 181 AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN------- 233
Query: 832 KADDNTVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++AV+ + + +D A +QL L C ++ + RP E+
Sbjct: 234 ----QDVIKAVEEGYRLPSPMDCPAA--LYQLMLDCWQKERNSRPKFDEI 277
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 89
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 143
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 200
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 247
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 248 EGARDLISRLLKHNPSQRPMLREV 271
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 18/224 (8%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETR 717
EF E +T+ + H +V +G Y + +Y+ NG L + L K L+
Sbjct: 49 EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQL 106
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777
L++ +G+A+L + + IHRD+ + N L+D + +SDFG+ R + +S
Sbjct: 107 LEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163
Query: 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836
+ + PE H + + KSDV++FGI++ E+ + GK D +N ++++ + +
Sbjct: 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-SEVVLKVSQGH 222
Query: 837 TVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ P ++ + +Q+ C P +RPT Q++
Sbjct: 223 RLYR---PHLASDTI--------YQIMYSCWHELPEKRPTFQQL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 71
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 125
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 182
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 229
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 230 EGARDLISRLLKHNPSQRPMLREV 253
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 73
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 127
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMH 184
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 231
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREV 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 111/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G ++ L K K D + A L+Y H +
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALSYCH---S 131
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ + GT+ Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGTLDYLPPEMIEGRMH 188
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 235
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREV 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 129
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ A + GT+ Y+ PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---LCGTLDYLPPEMIEGRMH 186
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 233
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 17/281 (6%)
Query: 601 MDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREF 659
MD + +D +++ K+ +G G VY+ K S +AVK L + + EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEF 61
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E + I+H N+V L G + ++M G+L D L +++ ++ L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLY 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+A + + YL IHRD+ + N L+ EN ++DFG++R + A
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839
I + PE ++ + KSDV++FG++L EI T + +L Q + + + M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRM 236
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
E PE K ++L C + PS+RP+ E+
Sbjct: 237 ER--PE--------GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 129
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 186
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 233
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 131
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMH 188
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 235
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREV 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 114/264 (43%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY KNS+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
++IHRD+K N+L+ + ++DFG + P++ A + GT+ Y+ PE
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---LCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQDTYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 73
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 127
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPPEMIEGRMH 184
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 231
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREV 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ A + GT+ Y+ PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---LCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 129
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 238
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 239 PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVNGSLW 700
+AVK+L + P R+F+ E++ + ++ IV G + P L +Y+ +G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L + +LD L + +G+ YL + R +HRD+ + NIL++ ++
Sbjct: 103 DFLQ--RHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIA 157
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+A+ +P + G I + PE + + +SDV+SFG+VL E+ T
Sbjct: 158 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVNGSLW 700
+AVK+L + P R+F+ E++ + ++ IV G + P L +Y+ +G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L + +LD L + +G+ YL + R +HRD+ + NIL++ ++
Sbjct: 115 DFLQ--RHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIA 169
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+A+ +P + G I + PE + + +SDV+SFG+VL E+ T
Sbjct: 170 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K + I A+K L+ H LR E+E +RH NI+
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 69
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 123
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 180
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 227
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 228 EGARDLISRLLKHNPSQRPMLREV 251
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 126
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ + GT+ Y+ PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIEGRMH 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 230
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREV 254
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 74
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 128
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ + GT+ Y+ PE
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIEGRMH 185
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 232
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 233 EGARDLISRLLKHNPSQRPMLREV 256
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 129
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + +++FG + P++ T + GT+ Y+ PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 186
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 233
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 129
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 238
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 239 PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 74
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 128
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + +++FG + P++ T + GT+ Y+ PE
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 185
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 232
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 233 EGARDLISRLLKHNPSQRPMLREV 256
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 130
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 239
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 85
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 141
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 250
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 251 PEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 129
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ + GT+ Y+ PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIEGRMH 186
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 233
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 128
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 237
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 132
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 241
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 242 PEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 128
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 237
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 130
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 239
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ +++ L +A + + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE--- 130
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 239
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 98
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 152
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ + GT+ Y+ PE
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIEGRMH 209
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 256
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 257 EGARDLISRLLKHNPSQRPMLREV 280
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 40/281 (14%)
Query: 609 DDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLY---NQYPHNLREFETELE 664
DD + +L E +G+G+ VY ++NS +A+KK+ Q ++ E+
Sbjct: 50 DDPEKLFSDLRE---IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV-- 722
+ +RH N + G L + L +Y + GS DLL K ++ ++IA
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQ-----EVEIAAVT 160
Query: 723 -GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG 781
GA QGLAYLH + +IHRDVK+ NIL+ E L DFG A + M A+ FV G
Sbjct: 161 HGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA----SIMAPANXFV-G 212
Query: 782 TIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838
T ++ PE + + K DV+S GI +E+ K + N + + L +++
Sbjct: 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 272
Query: 839 MEAVD-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQ 878
+++ E VD C ++ P +RPT +
Sbjct: 273 LQSGHWSEYFRNFVD------------SCLQKIPQDRPTSE 301
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQY------PHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 73
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCH---S 127
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ + GT+ Y+ PE
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPEMIEGRMH 184
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 231
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREV 255
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K K D + A L+Y H +
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCH---S 129
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ + ++DFG + P++ + GT+ Y+ PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIEGRMH 186
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
+EK D++S G++ E L GK E+N +Q + V T D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRIS----------RVEFTFPDF-VT 233
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
L K PS+RP ++EV
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREV 257
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ ++ L +A + + YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE--- 128
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 237
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ ++ L +A + + YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE--- 128
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 237
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWD 701
+AVK + N + F E + +RH N+V L G + G L + +YM GSL D
Sbjct: 47 VAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L + V L + LK ++ + + YL + +HRD+ + N+L+ E+ A +SD
Sbjct: 105 YLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 160
Query: 762 FGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
FG+ + +ST G + + PE + + KSDV+SFGI+L EI +
Sbjct: 161 FGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 25/269 (9%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ ++ L +A + + YL
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE--- 126
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 796 LNEKSDVYSFGIVLLEILTGKKA----VDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851
+ KSDV++FG++L EI T + +D S +++L+ + + ME PE
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDP-SQVYELL----EKDYRMER--PE------ 233
Query: 852 DLSAVRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 234 --GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNLLFYDYMVNGSLW 700
+AVK+L + P R+F+ E++ + ++ IV G + P L +Y+ +G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
D L + +LD L + +G+ YL + R +HRD+ + NIL++ ++
Sbjct: 102 DFLQ--RHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIA 156
Query: 761 DFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+A+ +P + G I + PE + + +SDV+SFG+VL E+ T
Sbjct: 157 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ ++ L +A + + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE--- 128
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 237
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ ++ L +A + + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE--- 128
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855
+ KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE--------GC 237
Query: 856 VRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 156/340 (45%), Gaps = 26/340 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL I+F N+LT P + N LV I +++N + P ++ L L L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQ 180
Q+T P L + NL L+L+ N ++ +I L LQ L N +T L P +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTS-LQQLSFSSNQVTD-LKP-LAN 171
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
LT L D+ N ++ + T+ E L + NQI+ P I + LSL GN+
Sbjct: 172 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI-LTNLDELSLNGNQ 228
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNM 300
L K + + L LDL+ N++ P L L+ +L L N+++ P L +
Sbjct: 229 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 282
Query: 301 SKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNR 360
+ L+ L+L NQL P + L+ L L L NN+ P +SS T L + + N+
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 338
Query: 361 LSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINL 399
+S SS NL ++ +L+ N P L RI L
Sbjct: 339 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQL 376
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 30/187 (16%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
++ L +LQ + F N++T P + N +L +++S N + DI ++KL LE L
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 201
Query: 117 LKNNQLTGPIP--------------------STLTQIPNLKTLDLARNQLTGEIPRLIYW 156
NNQ++ P TL + NL LDLA NQ++ P +
Sbjct: 202 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 259
Query: 157 NEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
L L L N ++ + SP + LT L ++ N L P I N + L + +N
Sbjct: 260 LTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 315
Query: 217 QITGEIP 223
I+ P
Sbjct: 316 NISDISP 322
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 21/272 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
+I R + L +K +G G V+ +AVK + ++ F E + ++
Sbjct: 11 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTL 67
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H +V LH ++ + ++M GSL D L + K + + A+G+A
Sbjct: 68 QHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKS-DEGSKQPLPKLIDFSAQIAEGMA 125
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 126 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 182
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L+EI+T G+ SN ++ + M PE
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPR--PE--- 235
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ + + + + C K P ERPT + +
Sbjct: 236 -----NCPEELYNIMMRCWKNRPEERPTFEYI 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWD 701
+AVK + N + F E + +RH N+V L G + G L + +YM GSL D
Sbjct: 32 VAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L + V L + LK ++ + + YL + +HRD+ + N+L+ E+ A +SD
Sbjct: 90 YLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 145
Query: 762 FGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
FG+ + +ST G + + PE + + KSDV+SFGI+L EI +
Sbjct: 146 FGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 156/340 (45%), Gaps = 26/340 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL I+F N+LT P + N LV I +++N + P ++ L L L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQ 180
Q+T P L + NL L+L+ N ++ +I L LQ L N +T L P +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTS-LQQLNFSSNQVTD-LKP-LAN 171
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
LT L D+ N ++ + T+ E L + NQI+ P I + LSL GN+
Sbjct: 172 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI-LTNLDELSLNGNQ 228
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNM 300
L K + + L LDL+ N++ P L L+ +L L N+++ P L +
Sbjct: 229 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 282
Query: 301 SKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNR 360
+ L+ L+L NQL P + L+ L L L NN+ P +SS T L + + N+
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 338
Query: 361 LSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINL 399
+S SS NL ++ +L+ N P L RI L
Sbjct: 339 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQL 376
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 30/187 (16%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
++ L +LQ ++F N++T P + N +L +++S N + DI ++KL LE L
Sbjct: 146 ALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 201
Query: 117 LKNNQLTGPIP--------------------STLTQIPNLKTLDLARNQLTGEIPRLIYW 156
NNQ++ P TL + NL LDLA NQ++ P +
Sbjct: 202 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 259
Query: 157 NEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
L L L N ++ + SP + LT L ++ N L P I N + L + +N
Sbjct: 260 LTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 315
Query: 217 QITGEIP 223
I+ P
Sbjct: 316 NISDISP 322
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 40/281 (14%)
Query: 609 DDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLY---NQYPHNLREFETELE 664
DD + +L E +G+G+ VY ++NS +A+KK+ Q ++ E+
Sbjct: 11 DDPEKLFSDLRE---IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 67
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV-- 722
+ +RH N + G L + L +Y + GS DLL K ++ ++IA
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQ-----EVEIAAVT 121
Query: 723 -GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG 781
GA QGLAYLH + +IHRDVK+ NIL+ E L DFG A + M A+ FV G
Sbjct: 122 HGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA----SIMAPANXFV-G 173
Query: 782 TIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838
T ++ PE + + K DV+S GI +E+ K + N + + L +++
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 233
Query: 839 MEAVD-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQ 878
+++ E VD C ++ P +RPT +
Sbjct: 234 LQSGHWSEYFRNFVD------------SCLQKIPQDRPTSE 262
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 29/252 (11%)
Query: 643 IAVKKLYNQYPHN-LREFETELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVNGSL 699
+AVK L + N + + + E+E + ++ H NIV G GN L +++ +GSL
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 100
Query: 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759
+ L P K K++ + +LK AV +G+ YL + + +HRD+ + N+L++ +
Sbjct: 101 KEYL--PKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKI 155
Query: 760 SDFGIARCIPTAMPHASTF--VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817
DFG+ + I T + + + PE S+ SDV+SFG+ L E+LT
Sbjct: 156 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT--- 212
Query: 818 AVDNESNLHQLIMSKADD-----------NTVMEAVDPEVSVTCVDLSAVRKTFQLALLC 866
D++S+ L + NT+ E C D + +QL C
Sbjct: 213 YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD-----EVYQLMRKC 267
Query: 867 TKRYPSERPTMQ 878
+ PS R + Q
Sbjct: 268 WEFQPSNRTSFQ 279
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 25/269 (9%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ ++ L +A + + YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE--- 126
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 796 LNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851
+ KSDV++FG++L EI ++ +D S +++L+ + + ME PE
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGID-PSQVYELL----EKDYRMER--PE------ 233
Query: 852 DLSAVRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 234 --GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNI 674
E L+ +G G++ V K++ + +AVKK+ + E+ + H N+
Sbjct: 45 EYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNV 104
Query: 675 VSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
V ++ L + +++ G+L D++ +++ E + + + L+YLH
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIATVCLSVLRALSYLH-- 158
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTS 794
N +IHRD+KS +IL+ + LSDFG + +P V GT ++ PE
Sbjct: 159 -NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRL 216
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854
+ D++S GI+++E++ G+ NE L + + +++ P V S
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-------RRIRDSLPPRVKDLHKVSS 269
Query: 855 AVRKTFQLALLCTKRYPSERPTMQEV 880
+R L L+ R PS+R T QE+
Sbjct: 270 VLRGFLDLMLV---REPSQRATAQEL 292
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 29/252 (11%)
Query: 643 IAVKKLYNQYPHN-LREFETELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVNGSL 699
+AVK L + N + + + E+E + ++ H NIV G GN L +++ +GSL
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 112
Query: 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759
+ L P K K++ + +LK AV +G+ YL + + +HRD+ + N+L++ +
Sbjct: 113 KEYL--PKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKI 167
Query: 760 SDFGIARCIPTAMPHASTF--VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817
DFG+ + I T + + + PE S+ SDV+SFG+ L E+LT
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT--- 224
Query: 818 AVDNESNLHQLIMSKADD-----------NTVMEAVDPEVSVTCVDLSAVRKTFQLALLC 866
D++S+ L + NT+ E C D + +QL C
Sbjct: 225 YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD-----EVYQLMRKC 279
Query: 867 TKRYPSERPTMQ 878
+ PS R + Q
Sbjct: 280 WEFQPSNRTSFQ 291
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWD 701
+AVK + N + F E + +RH N+V L G + G L + +YM GSL D
Sbjct: 219 VAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L + V L + LK ++ + + YL + +HRD+ + N+L+ E+ A +SD
Sbjct: 277 YLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 332
Query: 762 FGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
FG+ + +ST G + + PE + + KSDV+SFGI+L EI +
Sbjct: 333 FGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWD 701
+AVK + N + F E + +RH N+V L G + G L + +YM GSL D
Sbjct: 38 VAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L + V L + LK ++ + + YL + +HRD+ + N+L+ E+ A +SD
Sbjct: 96 YLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 151
Query: 762 FGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
FG+ + +ST G + + PE + + KSDV+SFGI+L EI +
Sbjct: 152 FGLTK------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 21/272 (7%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
+I R + L +K +G G V+ +AVK + ++ F E + ++
Sbjct: 184 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTL 240
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H +V LH ++ + ++M GSL D L + K + + A+G+A
Sbjct: 241 QHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKS-DEGSKQPLPKLIDFSAQIAEGMA 298
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR I A I + PE
Sbjct: 299 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 355
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L+EI+T G+ SN ++ + M PE
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPR--PE--- 408
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
C + + + + + C K P ERPT + +
Sbjct: 409 NCPE-----ELYNIMMRCWKNRPEERPTFEYI 435
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAV-KKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G K + + + V K+L R F E++ + + H N++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 682 LSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
+Y+ G+L ++ S + W R+ A A G+AYLH + IIH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIK--SMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF-------------VLGTIGYIDP 788
RD+ S N L+ EN + ++DFG+AR + V+G ++ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEIL 813
E + +EK DV+SFGIVL EI+
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 155/340 (45%), Gaps = 26/340 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL I+F N+LT P + N LV I +++N + P ++ L L L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQ 180
Q+T P L + NL L+L+ N ++ +I L LQ L N +T L P +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTS-LQQLSFSSNQVTD-LKP-LAN 171
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
LT L D+ N ++ + T+ E L + NQI+ P I + LSL GN+
Sbjct: 172 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI-LTNLDELSLNGNQ 228
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNM 300
L K + + L LDL+ N++ P L L+ +L L N+++ P L +
Sbjct: 229 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 282
Query: 301 SKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNR 360
+ L+ L+L NQL P + L+ L L L NN+ P +SS T L + N+
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNK 338
Query: 361 LSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINL 399
+S SS NL ++ +L+ N P L RI L
Sbjct: 339 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQL 376
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 30/187 (16%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
++ L +LQ + F N++T P + N +L +++S N + DI ++KL LE L
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 201
Query: 117 LKNNQLTGPIP--------------------STLTQIPNLKTLDLARNQLTGEIPRLIYW 156
NNQ++ P TL + NL LDLA NQ++ P +
Sbjct: 202 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 259
Query: 157 NEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
L L L N ++ + SP + LT L ++ N L P I N + L + +N
Sbjct: 260 LTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 315
Query: 217 QITGEIP 223
I+ P
Sbjct: 316 NISDISP 322
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 16/180 (8%)
Query: 643 IAVKKLYNQYPHN-LREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K L + Y R+F +E +G H N++ L G ++ ++M NGSL
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 702 LLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
L G ++L + + G A G+ YL D N +HRD+ + NIL++ N
Sbjct: 124 FLRQNDGQFTVIQL-----VGMLRGIAAGMKYLA-DMN--YVHRDLAARNILVNSNLVCK 175
Query: 759 LSDFGIARCIP--TAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+SDFG++R + T+ P ++ + G I + PE + SDV+S+GIV+ E+++
Sbjct: 176 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLH-GPSKKVKLDWETRL 718
+ E+ + + +G L + +Y+ GS DLL GP + ++ T L
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI--ATML 126
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
K + +GL YLH + + IHRD+K++N+L+ E D L+DFG+A + +TF
Sbjct: 127 KEIL---KGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 180
Query: 779 VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838
V GT ++ PE S + K+D++S GI +E+ G+ S++H + V
Sbjct: 181 V-GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP---NSDMHPM--------RV 228
Query: 839 MEAVDPEVSVTCV-DLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ + T V D + K F A C + PS RPT +E+ +
Sbjct: 229 LFLIPKNNPPTLVGDFTKSFKEFIDA--CLNKDPSFRPTAKELLK 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY + S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR---EVEIQSHLRHPNILR 76
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K + D + A L+Y H +
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYCH---S 130
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ N + ++DFG + P++ T + GT+ Y+ PE
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMH 187
Query: 797 NEKSDVYSFGIVLLEILTG 815
+EK D++S G++ E L G
Sbjct: 188 DEKVDLWSLGVLCYEFLVG 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 30/287 (10%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK----NSRPIAVKKLYNQYPHN-LRE 658
A+H F + ++ E+ ++G G V LK +A+K L Y R+
Sbjct: 32 AVHQFAKELDASCIKIER-VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD 90
Query: 659 FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRL 718
F E +G H N+V L G ++ ++M NG+L L K D + +
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR------KHDGQFTV 144
Query: 719 KIAVGAAQGLAY-LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777
VG +G+A + + + +HRD+ + NIL++ N +SDFG++R I T
Sbjct: 145 IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 778 FVLGTI--GYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKAD 834
G I + PE + SDV+S+GIV+ E+++ G++ + SN
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---------- 254
Query: 835 DNTVMEAVDPEVSVTC-VDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
V++A++ + +D A QL L C ++ +ERP +++
Sbjct: 255 -QDVIKAIEEGYRLPAPMDCPA--GLHQLMLDCWQKERAERPKFEQI 298
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 25/269 (9%)
Query: 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+++ K+ +G G VY+ K S +AVK L + + EF E + I+H N+V
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
L G + ++M G+L D L +++ ++ L +A + + YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE--- 126
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
IHRD+ + N L+ EN ++DFG++R + A I + PE ++
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 796 LNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851
+ KSDV++FG++L EI ++ +D S +++L+ + + ME PE
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGID-PSQVYELL----EKDYRMER--PE------ 233
Query: 852 DLSAVRKTFQLALLCTKRYPSERPTMQEV 880
K ++L C + PS+RP+ E+
Sbjct: 234 --GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 17/274 (6%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETI 666
+D +++ K+ +G G VY+ K S +AVK L + + EF E +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVM 267
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
I+H N+V L G + ++M G+L D L +++ +++ L +A +
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISS 326
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
+ YL IHR++ + N L+ EN ++DFG++R + A I +
Sbjct: 327 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 383
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846
PE ++ + KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER--PE- 439
Query: 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
C + K ++L C + PS+RP+ E+
Sbjct: 440 --GCPE-----KVYELMRACWQWNPSDRPSFAEI 466
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 71 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 185 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 239
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 19/258 (7%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G++ V K+S R +AVK + + E+ + +H N+V ++ L
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +++ G+L D++ +V+L+ E + Q LAYLH +IHR
Sbjct: 113 VGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHR 165
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS +IL+ + LSDFG I +P V GT ++ PE S + D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDI 224
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
+S GI+++E++ G+ ++S + M + D+ P +S V + F
Sbjct: 225 WSLGIMVIEMVDGEPPYFSDSPVQA--MKRLRDSP------PPKLKNSHKVSPVLRDFLE 276
Query: 863 ALLCTKRYPSERPTMQEV 880
+L R P ER T QE+
Sbjct: 277 RMLV--RDPQERATAQEL 292
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 643 IAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K L Y R+F +E +G H NI+ L G ++ +YM NGSL
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 702 LLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
L G ++L + + G G+ YL + +HRD+ + NIL++ N
Sbjct: 99 FLRKNDGRFTVIQL-----VGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCK 150
Query: 759 LSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-G 815
+SDFG++R + A T G I + PE + SDV+S+GIV+ E+++ G
Sbjct: 151 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 210
Query: 816 KKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP 875
++ + SN +I + + + +D +++ QL L C ++ S+RP
Sbjct: 211 ERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIAL-----------HQLMLDCWQKERSDRP 258
Query: 876 TMQEV 880
++
Sbjct: 259 KFGQI 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 643 IAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K L Y R+F +E +G H NI+ L G ++ +YM NGSL
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 702 LLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
L G ++L + + G G+ YL + +HRD+ + NIL++ N
Sbjct: 105 FLRKNDGRFTVIQL-----VGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCK 156
Query: 759 LSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-G 815
+SDFG++R + A T G I + PE + SDV+S+GIV+ E+++ G
Sbjct: 157 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 216
Query: 816 KKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP 875
++ + SN +I + + + +D +++ QL L C ++ S+RP
Sbjct: 217 ERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIAL-----------HQLMLDCWQKERSDRP 264
Query: 876 TMQEV 880
++
Sbjct: 265 KFGQI 269
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 17/274 (6%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETI 666
+D +++ K+ +G G VY+ K S +AVK L + + EF E +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVM 309
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
I+H N+V L G + ++M G+L D L +++ +++ L +A +
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISS 368
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
+ YL IHR++ + N L+ EN ++DFG++R + A I +
Sbjct: 369 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 425
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846
PE ++ + KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRME--RPE- 481
Query: 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
C + K ++L C + PS+RP+ E+
Sbjct: 482 --GCPE-----KVYELMRACWQWNPSDRPSFAEI 508
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN---LLFYDYMVNGSL 699
+AVK+L + P R+F+ E++ + ++ IV G + P G L +Y+ +G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP-GRPELRLVMEYLPSGCL 97
Query: 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759
D L + +LD L + +G+ YL + R +HRD+ + NIL++ +
Sbjct: 98 RDFLQ--RHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKI 152
Query: 760 SDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+DFG+A+ +P G I + PE + + +SDV+SFG+VL E+ T
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 623 IVGYGASSTVYKCALK----NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSL 677
++G G V + LK +A+K L Y REF +E +G H NI+ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 678 HGYALSPYGNLLFYDYMVNGSLWDLLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
G + ++ ++M NG+L L G ++L + + G A G+ YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYLAEM 137
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP--TAMPHASTFVLGT--IGYIDPEY 790
+HRD+ + NIL++ N +SDFG++R + ++ P ++ + G I + PE
Sbjct: 138 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 791 AHTSRLNEKSDVYSFGIVLLEILT 814
+ SD +S+GIV+ E+++
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 9 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 177
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 9 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 177
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 29/246 (11%)
Query: 643 IAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K L Y R+F +E +G H NI+ L G ++ +YM NGSL
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 702 LLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
L G ++L + + G G+ YL + +HRD+ + NIL++ N
Sbjct: 120 FLRKNDGRFTVIQL-----VGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCK 171
Query: 759 LSDFGIARCIPTAMPHASTFVLG---TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT- 814
+SDFG++R + P A+ G I + PE + SDV+S+GIV+ E+++
Sbjct: 172 VSDFGMSRVLEDD-PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 230
Query: 815 GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSER 874
G++ + SN +I + + + +D +++ QL L C ++ S+R
Sbjct: 231 GERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIAL-----------HQLMLDCWQKERSDR 278
Query: 875 PTMQEV 880
P ++
Sbjct: 279 PKFGQI 284
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 28 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 196
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
+ + +SD++S G+ L+E+ G+ + + S
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGSGS 226
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 36 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 204
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 9 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 177
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 33/231 (14%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWDLLHGPS-----KKVK 711
E E+ + +++H NIV + + G+L + DY G L+ ++ +
Sbjct: 69 ESRREVAVLANMKHPNIVQ-YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 712 LDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771
LDW ++ +A L H + +I+HRD+KS NI + ++ L DFGIAR + +
Sbjct: 128 LDWFVQICLA---------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178
Query: 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMS 831
+ A +GT Y+ PE N KSD+++ G VL E+ T K A + S + L++
Sbjct: 179 VELARA-CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-MKNLVLK 236
Query: 832 KADDNTVMEAVDPEVSV-TCVDL-SAVRKTFQLALLCTKRYPSERPTMQEV 880
++ P VS+ DL S V + F KR P +RP++ +
Sbjct: 237 ------IISGSFPPVSLHYSYDLRSLVSQLF-------KRNPRDRPSVNSI 274
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 9 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 177
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 623 IVGYGASSTVYKCALK----NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSL 677
++G G V + LK +A+K L Y REF +E +G H NI+ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 678 HGYALSPYGNLLFYDYMVNGSLWDLLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
G + ++ ++M NG+L L G ++L + + G A G+ YL
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYLAEM 135
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP--TAMPHASTFVLGT--IGYIDPEY 790
+HRD+ + NIL++ N +SDFG++R + ++ P ++ + G I + PE
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 791 AHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESN 824
+ SD +S+GIV+ E+++ G++ + SN
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 17/274 (6%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETI 666
+D +++ K+ +G G VY+ K S +AVK L + + EF E +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVM 270
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
I+H N+V L G + ++M G+L D L +++ ++ L +A +
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISS 329
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
+ YL IHR++ + N L+ EN ++DFG++R + A I +
Sbjct: 330 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 386
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846
PE ++ + KSDV++FG++L EI T + +L Q + + + ME PE
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRME--RPE- 442
Query: 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
C + K ++L C + PS+RP+ E+
Sbjct: 443 --GCPE-----KVYELMRACWQWNPSDRPSFAEI 469
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 9 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+ PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYMSPERLQG 177
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 36/231 (15%)
Query: 612 MRSTENLSEKYIVGYGASSTVYKC--ALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
+R + E ++G GA V K AL +SR A+KK+ L +E+ + S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKI-RHTEEKLSTILSEVMLLASL 59
Query: 670 RHRNIVSLHGYALS-----------PYGNLLF--YDYMVNGSLWDLLHGPSKKVKLDWET 716
H+ +V + L + LF +Y NG+L+DL+H + + D
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 717 RLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA----- 771
RL + + L+Y+H IIHRD+K NI IDE+ + + DFG+A+ + +
Sbjct: 120 RLFRQI--LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 772 -----MPHAS---TFVLGTIGYIDPEYAH-TSRLNEKSDVYSFGIVLLEIL 813
+P +S T +GT Y+ E T NEK D+YS GI+ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLH-GPSKKVKLDWETRLKIAVGAAQGLAYLH 732
+ +G L + +Y+ GS DLL GP LD I +GL YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 141
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+ + IHRD+K++N+L+ E+ + L+DFG+A + +TFV GT ++ PE
Sbjct: 142 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 197
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852
S + K+D++S GI +E+ G+ + L + ++ +E +
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------N 247
Query: 853 LSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
S K F A C + PS RPT +E+ +
Sbjct: 248 YSKPLKEFVEA--CLNKEPSFRPTAKELLK 275
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 157/340 (46%), Gaps = 27/340 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL I+F N+LT P + N LV I +++N + P ++ L L L L NN
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQ 180
Q+T P L + NL L+L+ N ++ +I L LQ L GN +T L P +
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTS-LQQLSF-GNQVTD-LKP-LAN 175
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
LT L D+ N ++ + T+ E L + NQI+ P I + LSL GN+
Sbjct: 176 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI-LTNLDELSLNGNQ 232
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNM 300
L K + + L LDL+ N++ P L L+ +L L N+++ P L +
Sbjct: 233 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286
Query: 301 SKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNR 360
+ L+ L+L NQL P + L+ L L L NN+ P +SS T L + + N+
Sbjct: 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 342
Query: 361 LSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINL 399
+S SS NL ++ +L+ N P L RI L
Sbjct: 343 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQL 380
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
++ L +LQ + F GN++T P + N +L +++S N + DI ++KL LE L
Sbjct: 151 ALSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 205
Query: 117 LKNNQLTGPIP--------------------STLTQIPNLKTLDLARNQLTGEIPRLIYW 156
NNQ++ P TL + NL LDLA NQ++ P +
Sbjct: 206 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 263
Query: 157 NEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
L L L N ++ + SP + LT L ++ N L P I N + L + +N
Sbjct: 264 LTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 319
Query: 217 QITGEIP 223
I+ P
Sbjct: 320 NISDISP 326
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 157/340 (46%), Gaps = 27/340 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL I+F N+LT P + N LV I +++N + P ++ L L L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQ 180
Q+T P L + NL L+L+ N ++ +I L LQ L GN +T L P +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTS-LQQLNF-GNQVTD-LKP-LAN 170
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
LT L D+ N ++ + T+ E L + NQI+ P I + LSL GN+
Sbjct: 171 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI-LTNLDELSLNGNQ 227
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNM 300
L K + + L LDL+ N++ P L L+ +L L N+++ P L +
Sbjct: 228 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 281
Query: 301 SKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNR 360
+ L+ L+L NQL P + L+ L L L NN+ P +SS T L + + N+
Sbjct: 282 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 337
Query: 361 LSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINL 399
+S SS NL ++ +L+ N P L RI L
Sbjct: 338 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQL 375
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
++ L +LQ ++F GN++T P + N +L +++S N + DI ++KL LE L
Sbjct: 146 ALSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 200
Query: 117 LKNNQLTGPIP--------------------STLTQIPNLKTLDLARNQLTGEIPRLIYW 156
NNQ++ P TL + NL LDLA NQ++ P +
Sbjct: 201 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 258
Query: 157 NEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
L L L N ++ + SP + LT L ++ N L P I N + L + +N
Sbjct: 259 LTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 314
Query: 217 QITGEIP 223
I+ P
Sbjct: 315 NISDISP 321
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLH-GPSKKVKLDWETRLKIAVGAAQGLAYLH 732
+ +G L + +Y+ GS DLL GP LD I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 121
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+ + IHRD+K++N+L+ E+ + L+DFG+A + +TFV GT ++ PE
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 177
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852
S + K+D++S GI +E+ G+ + L + ++ +E +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------N 227
Query: 853 LSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
S K F A C + PS RPT +E+ +
Sbjct: 228 YSKPLKEFVEA--CLNKEPSFRPTAKELLK 255
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 24/288 (8%)
Query: 597 VILHMDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHN 655
V+LH + D + + E+L +G G V+ L+ ++ +AVK P +
Sbjct: 98 VVLHRAVPK---DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD 154
Query: 656 LR-EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
L+ +F E + H NIV L G + + + G L ++++
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV-- 212
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774
+T L++ AA G+ YL C IHRD+ + N L+ E +SDFG++R +
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXA 269
Query: 775 ASTFVLGT-IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSK 832
AS + + + PE + R + +SDV+SFGI+L E + G N SN
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-------- 321
Query: 833 ADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
E V+ + C +L F+L C P +RP+ +
Sbjct: 322 ---QQTREFVEKGGRLPCPELCP-DAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY + S+ I A+K L+ H LR E+E +RH NI+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR---EVEIQSHLRHPNILR 76
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+GY L +Y G+++ L K + D + A L+Y H +
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYCH---S 130
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
R+IHRD+K N+L+ N + ++DFG + P++ + GT+ Y+ PE
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPEMIEGRMH 187
Query: 797 NEKSDVYSFGIVLLEILTG 815
+EK D++S G++ E L G
Sbjct: 188 DEKVDLWSLGVLCYEFLVG 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRN 673
E +SE +G G V+K + K S + +KL + P + EL+ +
Sbjct: 12 EKISE---LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
IV +G S + ++M GSL +L K ++ + K+++ +GL YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+I+HRDVK SNIL++ + L DFG++ + M A+ FV GT Y+ PE
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM--ANEFV-GTRSYMSPERLQG 180
Query: 794 SRLNEKSDVYSFGIVLLEILTGK 816
+ + +SD++S G+ L+E+ G+
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 643 IAVKKLYNQYPHN-LREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K L + Y R+F +E +G H N++ L G ++ ++M NGSL
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 702 LLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
L G ++L + + G A G+ YL D N +HR + + NIL++ N
Sbjct: 98 FLRQNDGQFTVIQL-----VGMLRGIAAGMKYL-ADMN--YVHRALAARNILVNSNLVCK 149
Query: 759 LSDFGIARCIP--TAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+SDFG++R + T+ P ++ + G I + PE + SDV+S+GIV+ E+++
Sbjct: 150 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 156/340 (45%), Gaps = 27/340 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL I+F N+LT P + N LV I +++N + P ++ L L L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQ 180
Q+T P L + NL L+L+ N ++ +I L LQ L GN +T L P +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTS-LQQLNF-GNQVTD-LKP-LAN 170
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
LT L D+ N ++ + T+ E L + NQI+ P I + LSL GN+
Sbjct: 171 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI-LTNLDELSLNGNQ 227
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNM 300
L K + + L LDL+ N++ P L L+ +L L N+++ P L +
Sbjct: 228 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 281
Query: 301 SKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNR 360
+ L+ L+L NQL P + L+ L L L NN+ P +SS T L + N+
Sbjct: 282 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNK 337
Query: 361 LSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINL 399
+S SS NL ++ +L+ N P L RI L
Sbjct: 338 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQL 375
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
++ L +LQ ++F GN++T P + N +L +++S N + DI ++KL LE L
Sbjct: 146 ALSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 200
Query: 117 LKNNQLTGPIP--------------------STLTQIPNLKTLDLARNQLTGEIPRLIYW 156
NNQ++ P TL + NL LDLA NQ++ P +
Sbjct: 201 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 258
Query: 157 NEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
L L L N ++ + SP + LT L ++ N L P I N + L + +N
Sbjct: 259 LTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 314
Query: 217 QITGEIP 223
I+ P
Sbjct: 315 NISDISP 321
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 24/288 (8%)
Query: 597 VILHMDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHN 655
V+LH + D + + E+L +G G V+ L+ ++ +AVK P +
Sbjct: 98 VVLHRAVPK---DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD 154
Query: 656 LR-EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
L+ +F E + H NIV L G + + + G L ++++
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV-- 212
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774
+T L++ AA G+ YL C IHRD+ + N L+ E +SDFG++R +
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269
Query: 775 ASTFVLGT-IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSK 832
AS + + + PE + R + +SDV+SFGI+L E + G N SN
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-------- 321
Query: 833 ADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
E V+ + C +L F+L C P +RP+ +
Sbjct: 322 ---QQTREFVEKGGRLPCPELCP-DAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETI 666
DD R +E +G G V K + S I +KL + P + EL+ +
Sbjct: 16 DDFERISE-------LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL 68
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
IV +G S + ++M GSL +L + ++ E K+++ +
Sbjct: 69 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIPEEILGKVSIAVLR 125
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
GLAYL +I+HRDVK SNIL++ + L DFG++ + +M A++FV GT Y+
Sbjct: 126 GLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFV-GTRSYM 180
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
PE + + +SD++S G+ L+E+ G+
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 622 YIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFE---TELETIGSIRHRNIVSLH 678
Y +G G+ K K+ I V K + E + +E+ + ++H NIV +
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 679 GYALSPYGNLLF--YDYMVNGSLWDLL-HGPSKKVKLDWETRLKIAVGAAQGLAYLHH-- 733
+ L+ +Y G L ++ G ++ LD E L++ L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
D ++HRD+K +N+ +D + L DFG+AR + A TFV GT Y+ PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNR 190
Query: 794 SRLNEKSDVYSFGIVLLEI 812
NEKSD++S G +L E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 156/340 (45%), Gaps = 27/340 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL I+F N+LT P + N LV I +++N + P ++ L L L L NN
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQ 180
Q+T P L + NL L+L+ N ++ +I L LQ L GN +T L P +
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTIS-DISALSGLTS-LQQLSF-GNQVTD-LKP-LAN 174
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK 240
LT L D+ N ++ + T+ E L + NQI+ P I + LSL GN+
Sbjct: 175 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGI-LTNLDELSLNGNQ 231
Query: 241 LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNM 300
L K + + L LDL+ N++ P L L+ +L L N+++ P L +
Sbjct: 232 L--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 285
Query: 301 SKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNR 360
+ L+ L+L NQL P + L+ L L L NN+ P +SS T L + N+
Sbjct: 286 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNK 341
Query: 361 LSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINL 399
+S SS NL ++ +L+ N P L RI L
Sbjct: 342 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQL 379
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
++ L +LQ + F GN++T P + N +L +++S N + DI ++KL LE L
Sbjct: 150 ALSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 204
Query: 117 LKNNQLTGPIP--------------------STLTQIPNLKTLDLARNQLTGEIPRLIYW 156
NNQ++ P TL + NL LDLA NQ++ P +
Sbjct: 205 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSG 262
Query: 157 NEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
L L L N ++ + SP + LT L ++ N L P I N + L + +N
Sbjct: 263 LTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 318
Query: 217 QITGEIP 223
I+ P
Sbjct: 319 NISDISP 325
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNSR-----PIAVKKLYNQY-PHNLREFETELE 664
I++ TE L ++G GA TVYK P+A+K L P EF E
Sbjct: 11 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ H ++V L G LSP L+ M +G L + +H K + + L V
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQLV-TQLMPHGCLLEYVH--EHKDNIGSQLLLNWCVQI 126
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTI 783
A+G+ YL R++HRD+ + N+L+ ++DFG+AR + + + I
Sbjct: 127 AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 183
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
++ E H + +SDV+S+G+ + E++T G K D
Sbjct: 184 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 21/281 (7%)
Query: 602 DMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFE 660
++ + D +++ K+ +G G VY K S +AVK L + + EF
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFL 76
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKI 720
E + I+H N+V L G + +YM G+L D L +++ ++ L +
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYM 135
Query: 721 AVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL 780
A + + YL IHRD+ + N L+ EN ++DFG++R + A
Sbjct: 136 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAK 192
Query: 781 GTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL--IMSKADDNTV 838
I + PE + + KSDV++FG++L EI T + +L Q+ ++ K
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ 252
Query: 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQE 879
E P+V ++L C K P++RP+ E
Sbjct: 253 PEGCPPKV-------------YELMRACWKWSPADRPSFAE 280
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNSR-----PIAVKKLYNQY-PHNLREFETELE 664
I++ TE L ++G GA TVYK P+A+K L P EF E
Sbjct: 34 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 92
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ H ++V L G LSP L+ M +G L + +H K + + L V
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQLV-TQLMPHGCLLEYVH--EHKDNIGSQLLLNWCVQI 149
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTI 783
A+G+ YL R++HRD+ + N+L+ ++DFG+AR + + + I
Sbjct: 150 AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 206
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
++ E H + +SDV+S+G+ + E++T G K D
Sbjct: 207 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 624 VGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GAS TVY + + +A++++ Q E+ + ++ NIV+ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +Y+ GSL D++ + +D + Q L +LH + ++IHR
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS NIL+ + L+DFG I ST V GT ++ PE K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860
+S GI+ +E++ G+ NE+ L L + N E +PE LSA+ + F
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIAT--NGTPELQNPE------KLSAIFRDF 249
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V+ + + +AVK + + ETE+ +RH NI+ +
Sbjct: 45 IGKGRYGEVWMGKWRGEK-VAVKVFFTTEEASWFR-ETEIYQTVLMRHENILGFIAADIK 102
Query: 684 PYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
G+ L DY NGSL+D L K LD ++ LK+A + GL +LH +
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS---TFVLGTIGYIDPEYA 791
P I HRD+KS NIL+ +N ++D G+A + +GT Y+ PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 792 HTSRLNEK-------SDVYSFGIVLLEI 812
S LN +D+YSFG++L E+
Sbjct: 219 DES-LNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 132
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---P 769
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 133 ---DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 187 XXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLH-GPSKKVKLDWETRLKIAVGAAQGLAYLH 732
+ +G L + +Y+ GS DLL GP LD I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 121
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+ + IHRD+K++N+L+ E+ + L+DFG+A + + FV GT ++ PE
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIK 177
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852
S + K+D++S GI +E+ G+ + L + ++ +E +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------N 227
Query: 853 LSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
S K F A C + PS RPT +E+ +
Sbjct: 228 YSKPLKEFVEA--CLNKEPSFRPTAKELLK 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLH-GPSKKVKLDWETRLKIAVGAAQGLAYLH 732
+ +G L + +Y+ GS DLL GP LD I +GL YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 136
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+ + IHRD+K++N+L+ E+ + L+DFG+A + + FV GT ++ PE
Sbjct: 137 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIK 192
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852
S + K+D++S GI +E+ G+ + L + ++ +E +
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----------N 242
Query: 853 LSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
S K F A C + PS RPT +E+ +
Sbjct: 243 YSKPLKEFVEA--CLNKEPSFRPTAKELLK 270
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 36/231 (15%)
Query: 612 MRSTENLSEKYIVGYGASSTVYKC--ALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
+R + E ++G GA V K AL +SR A+KK+ L +E+ + S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKI-RHTEEKLSTILSEVMLLASL 59
Query: 670 RHRNIVSLHGYALS-----------PYGNLLF--YDYMVNGSLWDLLHGPSKKVKLDWET 716
H+ +V + L + LF +Y N +L+DL+H + + D
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 717 RLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA----- 771
RL + + L+Y+H IIHRD+K NI IDE+ + + DFG+A+ + +
Sbjct: 120 RLFRQI--LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 772 -----MPHAS---TFVLGTIGYIDPEYAH-TSRLNEKSDVYSFGIVLLEIL 813
+P +S T +GT Y+ E T NEK D+YS GI+ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 31/272 (11%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
+I R + L +K +G G V+ +AVK + ++ F E + ++
Sbjct: 178 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTL 234
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H +V LH ++ + ++M GSL D L + K + + A+G+A
Sbjct: 235 QHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKS-DEGSKQPLPKLIDFSAQIAEGMA 292
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE 789
++ IHRD++++NIL+ + ++DFG+AR + P I + PE
Sbjct: 293 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR-VGAKFP---------IKWTAPE 339
Query: 790 YAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
+ KSDV+SFGI+L+EI+T G+ SN V+ A++ +
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------VIRALERGYRM 388
Query: 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ + + + + + C K P ERPT + +
Sbjct: 389 PRPE-NCPEELYNIMMRCWKNRPEERPTFEYI 419
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 623 IVGYGASSTVY---KCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVS 676
++G G+ V+ K + ++R + K+ + +R+ + E + + + H IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 677 LHGYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
LH YA G L L D++ G L+ L SK+V E A L +LH
Sbjct: 91 LH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLH--- 143
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
+ II+RD+K NIL+DE L+DFG+++ A +F GT+ Y+ PE +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRG 202
Query: 796 LNEKSDVYSFGIVLLEILTG 815
+ +D +SFG+++ E+LTG
Sbjct: 203 HTQSADWWSFGVLMFEMLTG 222
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKK 709
+ +F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 92 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 151
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI- 768
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 152 ------DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 202
Query: 769 --PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 203 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 152
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---P 769
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 153 ---DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 206
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 207 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 623 IVGYGASSTVY---KCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVS 676
++G G+ V+ K + ++R + K+ + +R+ + E + + + H IV
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 677 LHGYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
LH YA G L L D++ G L+ L SK+V E A L +LH
Sbjct: 92 LH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLH--- 144
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
+ II+RD+K NIL+DE L+DFG+++ A +F GT+ Y+ PE +
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRG 203
Query: 796 LNEKSDVYSFGIVLLEILTG 815
+ +D +SFG+++ E+LTG
Sbjct: 204 HTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 623 IVGYGASSTVY---KCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVS 676
++G G+ V+ K + ++R + K+ + +R+ + E + + + H IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 677 LHGYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
LH YA G L L D++ G L+ L SK+V E A L +LH
Sbjct: 91 LH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLH--- 143
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
+ II+RD+K NIL+DE L+DFG+++ A +F GT+ Y+ PE +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRG 202
Query: 796 LNEKSDVYSFGIVLLEILTG 815
+ +D +SFG+++ E+LTG
Sbjct: 203 HTQSADWWSFGVLMFEMLTG 222
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 125
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---P 769
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 126 ---DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 179
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 180 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRL 718
+ E + + + H +V LH YA G L L D++ G L+ L SK+V E
Sbjct: 78 KMERDILADVNHPFVVKLH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVK 133
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
A GL +LH + II+RD+K NIL+DE L+DFG+++ A +F
Sbjct: 134 FYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 779 VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
GT+ Y+ PE + + +D +S+G+++ E+LTG
Sbjct: 191 C-GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 133
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---P 769
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 134 ---DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKK 709
+ +F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 71 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI- 768
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 131 ------DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181
Query: 769 --PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 182 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 132
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---P 769
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 133 ---DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 187 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 133
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---P 769
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 134 ---DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKK 709
+ +F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 72 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 131
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI- 768
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 132 ------DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 182
Query: 769 --PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 183 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 45/289 (15%)
Query: 624 VGYGASSTVYKCALKNSRP------IAVKKLYNQYPHNLR-EFETELETIGSIRHRNIVS 676
+G GA V++ P +AVK L + +++ +F+ E + + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL-----DWETR-------------- 717
L G L ++YM G L + L S D TR
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 718 --LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH- 774
L IA A G+AYL + +HRD+ + N L+ EN ++DFG++R I +A +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKA 833
A I ++ PE +R +SDV+++G+VL EI + G + + H+ ++
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA--HEEVIYYV 289
Query: 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
D ++ PE + + + L LC + P++RP+ + R
Sbjct: 290 RDGNILAC--PE--------NCPLELYNLMRLCWSKLPADRPSFCSIHR 328
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 622 YIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFE---TELETIGSIRHRNIVSLH 678
Y +G G+ K K+ I V K + E + +E+ + ++H NIV +
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 679 GYALSPYGNLLF--YDYMVNGSLWDLL-HGPSKKVKLDWETRLKIAVGAAQGLAYLHH-- 733
+ L+ +Y G L ++ G ++ LD E L++ L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
D ++HRD+K +N+ +D + L DFG+AR + A FV GT Y+ PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNR 190
Query: 794 SRLNEKSDVYSFGIVLLEI 812
NEKSD++S G +L E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 669 IRHRNIVSLHGYALSPYG-NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQG 727
+ H N+++L G L P G + YM +G L + P + + + + + A+G
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARG 136
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-----TAMPHASTFVLGT 782
+ YL + +HRD+ + N ++DE+F ++DFG+AR I + H +
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--P 191
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ + E T R KSDV+SFG++L E+LT
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKK 709
+ +F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 69 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 128
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI- 768
+ + A+G+ YL + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 129 ------DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179
Query: 769 --PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G++ V +++S + +AVKK+ + E+ + +H N+V ++ L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +++ G+L D++ +++ E + + Q L+ LH +IHR
Sbjct: 142 VGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 194
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS +IL+ + LSDFG + +P V GT ++ PE + D+
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 253
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIM 830
+S GI+++E++ G+ NE L + M
Sbjct: 254 WSLGIMVIEMVDGEPPYFNEPPLKAMKM 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 24/262 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGSIRHRNIVSLH 678
+G G + ++ + +++ + K+ + PH + E+ S+ H+++V H
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
G+ + + SL +L +K + E R + G YLH + R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 137
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
+IHRD+K N+ ++E+ + + DFG+A + T + GT YI PE +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 799 KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858
+ DV+S G ++ +L GK + + K ++ ++ + ++P V S ++K
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINP------VAASLIQK 250
Query: 859 TFQLALLCTKRYPSERPTMQEV 880
Q P+ RPT+ E+
Sbjct: 251 MLQTD-------PTARPTINEL 265
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 639 NSRPIAVKKLYNQYPHNLREFE---TELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695
N R A+K L + L++ E E + + H I+ + G + DY+
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89
Query: 696 NGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI 751
G L+ LL P+ K A L YLH + II+RD+K NIL+
Sbjct: 90 GGELFSLLRKSQRFPNPVAKF-------YAAEVCLALEYLH---SKDIIYRDLKPENILL 139
Query: 752 DENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLE 811
D+N ++DFG A+ +P + + GT YI PE T N+ D +SFGI++ E
Sbjct: 140 DKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 195
Query: 812 ILTG 815
+L G
Sbjct: 196 MLAG 199
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G++ V +++S + +AVKK+ + E+ + +H N+V ++ L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +++ G+L D++ +++ E + + Q L+ LH +IHR
Sbjct: 97 VGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 149
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS +IL+ + LSDFG + +P V GT ++ PE + D+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 208
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
+S GI+++E++ G+ NE L + M +
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 24/262 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGSIRHRNIVSLH 678
+G G + ++ + +++ + K+ + PH + E+ S+ H+++V H
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
G+ + + SL +L +K + E R + G YLH + R
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 137
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
+IHRD+K N+ ++E+ + + DFG+A + T + GT YI PE +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 799 KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858
+ DV+S G ++ +L GK + + K ++ ++ + ++P V S ++K
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINP------VAASLIQK 250
Query: 859 TFQLALLCTKRYPSERPTMQEV 880
Q P+ RPT+ E+
Sbjct: 251 MLQTD-------PTARPTINEL 265
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 624 VGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GAS TVY + + +A++++ Q E+ + ++ NIV+ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +Y+ GSL D++ + +D + Q L +LH + ++IHR
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS NIL+ + L+DFG I S V GT ++ PE K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860
+S GI+ +E++ G+ NE+ L L + N E +PE LSA+ + F
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIAT--NGTPELQNPE------KLSAIFRDF 249
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G++ V +++S + +AVKK+ + E+ + +H N+V ++ L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +++ G+L D++ +++ E + + Q L+ LH +IHR
Sbjct: 99 VGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 151
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS +IL+ + LSDFG + +P V GT ++ PE + D+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 210
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIM 830
+S GI+++E++ G+ NE L + M
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKM 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 624 VGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GAS TVY + + +A++++ Q E+ + ++ NIV+ L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +Y+ GSL D++ + +D + Q L +LH + ++IHR
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 141
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
++KS NIL+ + L+DFG I ST V GT ++ PE K D+
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860
+S GI+ +E++ G+ NE+ L L + N E +PE LSA+ + F
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENPLRALYLIAT--NGTPELQNPE------KLSAIFRDF 250
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 624 VGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GAS TVY + + +A++++ Q E+ + ++ NIV+ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +Y+ GSL D++ + +D + Q L +LH + ++IHR
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS NIL+ + L+DFG I S V GT ++ PE K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860
+S GI+ +E++ G+ NE+ L L + N E +PE LSA+ + F
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIAT--NGTPELQNPE------KLSAIFRDF 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 624 VGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GAS TVY + + +A++++ Q E+ + ++ NIV+ L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +Y+ GSL D++ + +D + Q L +LH + ++IHR
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 141
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS NIL+ + L+DFG I S V GT ++ PE K D+
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860
+S GI+ +E++ G+ NE+ L L + N E +PE LSA+ + F
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENPLRALYLIAT--NGTPELQNPE------KLSAIFRDF 250
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G++ V +++S + +AVKK+ + E+ + +H N+V ++ L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +++ G+L D++ +++ E + + Q L+ LH +IHR
Sbjct: 219 VGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 271
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS +IL+ + LSDFG + +P V GT ++ PE + D+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 330
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIM 830
+S GI+++E++ G+ NE L + M
Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKM 358
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G++ V +++S + +AVKK+ + E+ + +H N+V ++ L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +++ G+L D++ +++ E + + Q L+ LH +IHR
Sbjct: 88 VGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 140
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS +IL+ + LSDFG + +P V GT ++ PE + D+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 199
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
+S GI+++E++ G+ NE L + M +
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 20/228 (8%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
PH + E+ S+ H+++V HG+ + + SL +L +K
Sbjct: 62 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALT 119
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
+ E R + G YLH + R+IHRD+K N+ ++E+ + + DFG+A +
Sbjct: 120 EPEARYYLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 175
Query: 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
T + GT YI PE + + DV+S G ++ +L GK + + K
Sbjct: 176 ERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 234
Query: 833 ADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
++ ++ + ++P V S ++K Q P+ RPT+ E+
Sbjct: 235 KNEYSIPKHINP------VAASLIQKMLQTD-------PTARPTINEL 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G++ V +++S + +AVKK+ + E+ + +H N+V ++ L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +++ G+L D++ +++ E + + Q L+ LH +IHR
Sbjct: 92 VGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 144
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+KS +IL+ + LSDFG + +P V GT ++ PE + D+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 203
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
+S GI+++E++ G+ NE L + M +
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 233
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 622 YIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFE---TELETIGSIRHRNIVSLH 678
Y +G G+ K K+ I V K + E + +E+ + ++H NIV +
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 679 GYALSPYGNLLF--YDYMVNGSLWDLL-HGPSKKVKLDWETRLKIAVGAAQGLAYLHH-- 733
+ L+ +Y G L ++ G ++ LD E L++ L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
D ++HRD+K +N+ +D + L DFG+AR + A FV GT Y+ PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNR 190
Query: 794 SRLNEKSDVYSFGIVLLEI 812
NEKSD++S G +L E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 20/260 (7%)
Query: 620 EKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLH 678
++ ++G G VY L N IA+K++ + + E+ ++H+NIV
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 679 GYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNP 737
G + S G + +F + + GSL LL +K + +T +GL YLH +
Sbjct: 72 G-SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 127
Query: 738 RIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTS-- 794
+I+HRD+K N+LI+ +SDFG ++ + P TF GT+ Y+ PE
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPR 186
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854
+ +D++S G ++E+ TGK E Q M K M V PE+ + +S
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAMFKVG----MFKVHPEIPES---MS 238
Query: 855 AVRKTFQLALLCTKRYPSER 874
A K F L C + P +R
Sbjct: 239 AEAKAF--ILKCFEPDPDKR 256
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYN-QYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA VYK K + +A K+ + + L ++ E++ + S H NIV L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL---- 100
Query: 683 SPYGNLLFYDYMVNGSLWDLLH----GPSKKVKLDWE---TRLKIAVGAAQGLAYLHHDC 735
+ +Y+ +LW L+ G V L+ E T +I V Q L L++
Sbjct: 101 ----DAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE--YAHT 793
+ +IIHRD+K+ NIL + D L+DFG++ + +F+ GT ++ PE T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCET 211
Query: 794 SR---LNEKSDVYSFGIVLLEI 812
S+ + K+DV+S GI L+E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 11/240 (4%)
Query: 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGS 668
R+ + +G G + Y+ +++ + K+ + PH + TE+ S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ + ++V HG+ + + SL +L H K V + E R QG+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAV-TEPEARY-FMRQTIQGV 155
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDP 788
YLH N R+IHRD+K N+ ++++ D + DFG+A I T + GT YI P
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
E + + D++S G +L +L GK + I K ++ +V ++P S
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA 271
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYN-QYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA VYK K + +A K+ + + L ++ E++ + S H NIV L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL---- 100
Query: 683 SPYGNLLFYDYMVNGSLWDLLH----GPSKKVKLDWE---TRLKIAVGAAQGLAYLHHDC 735
+ +Y+ +LW L+ G V L+ E T +I V Q L L++
Sbjct: 101 ----DAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE--YAHT 793
+ +IIHRD+K+ NIL + D L+DFG++ + +F+ GT ++ PE T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCET 211
Query: 794 SR---LNEKSDVYSFGIVLLEI 812
S+ + K+DV+S GI L+E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 20/260 (7%)
Query: 620 EKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLH 678
++ ++G G VY L N IA+K++ + + E+ ++H+NIV
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 679 GYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNP 737
G + S G + +F + + GSL LL +K + +T +GL YLH +
Sbjct: 86 G-SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 141
Query: 738 RIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTS-- 794
+I+HRD+K N+LI+ +SDFG ++ + P TF GT+ Y+ PE
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPR 200
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854
+ +D++S G ++E+ TGK E Q M K M V PE+ + +S
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAMFKVG----MFKVHPEIPES---MS 252
Query: 855 AVRKTFQLALLCTKRYPSER 874
A K F L C + P +R
Sbjct: 253 AEAKAF--ILKCFEPDPDKR 270
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P + +F E+ + S+ HRN++ L+G L+P ++ + GSL D L L
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLL 114
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
T + AV A+G+ YL + R IHRD+ + N+L+ + DFG+ R +P
Sbjct: 115 G--TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
Query: 773 PHASTFVLGT-----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H +V+ + PE T + SD + FG+ L E+ T
Sbjct: 170 DH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKK 709
+ +F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 133 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 192
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
+ + A+G+ +L + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 193 ------DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243
Query: 770 TA---MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 131
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA- 771
+ + A+G+ +L + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 132 ---DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Query: 772 --MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 186 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 134
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---P 769
+ + A+G+ +L + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 135 ---DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE 188
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 189 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 138
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA- 771
+ + A+G+ +L + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 139 ---DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 192
Query: 772 --MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 193 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKK 709
+ +F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 75 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 134
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
+ + A+G+ +L + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 135 ------DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 185
Query: 770 TA---MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 186 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKKVKL 712
+F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--- 133
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA- 771
+ + A+G+ +L + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 134 ---DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 772 --MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 188 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGN-LLFYDYMVNGSLWDLL----HGPSKK 709
+ +F TE + H N++SL G L G+ L+ YM +G L + + H P+ K
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
+ + A+G+ +L + + +HRD+ + N ++DE F ++DFG+AR +
Sbjct: 134 ------DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
Query: 770 TA---MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H T + ++ E T + KSDV+SFG++L E++T
Sbjct: 185 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYA 681
+G G+ +VYK K + I K Q P +L+E E+ + ++V +G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK---QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 682 LSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
+ +Y GS+ D++ +K + D I +GL YLH R IH
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLHF---MRKIH 148
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
RD+K+ NIL++ A L+DFG+A + M + V+GT ++ PE N +D
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX-VIGTPFWMAPEVIQEIGYNCVAD 207
Query: 802 VYSFGIVLLEILTGK 816
++S GI +E+ GK
Sbjct: 208 IWSLGITAIEMAEGK 222
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P + +F E+ + S+ HRN++ L+G L+P ++ + GSL D L L
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLL 114
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
T + AV A+G+ YL + R IHRD+ + N+L+ + DFG+ R +P
Sbjct: 115 G--TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
Query: 773 PHASTFVLGT-----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H +V+ + PE T + SD + FG+ L E+ T
Sbjct: 170 DH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P + +F E+ + S+ HRN++ L+G L+P ++ + GSL D L L
Sbjct: 62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLL 120
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
T + AV A+G+ YL + R IHRD+ + N+L+ + DFG+ R +P
Sbjct: 121 G--TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 773 PHASTFVLGT-----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H +V+ + PE T + SD + FG+ L E+ T
Sbjct: 176 DH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 24/262 (9%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYN--QYPHNLREFETELETIGSIRHRNIVSLHGYA 681
+G G+ VYK +++ + K+ + + + + + E+ + I G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 682 LSPYGNLLFYDYMVNGSLWDLLH-GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740
L + +Y+ GS DLL GP ++ + I +GL YLH + R I
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----ATILREILKGLDYLHSE---RKI 138
Query: 741 HRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKS 800
HRD+K++N+L+ E D L+DFG+A + + FV GT ++ PE S + K+
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKA 197
Query: 801 DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860
D++S GI +E+ G+ S+LH + V+ + P+ S ++ +
Sbjct: 198 DIWSLGITAIELAKGEPP---NSDLHPM--------RVLFLI-PKNSPPTLEGQHSKPFK 245
Query: 861 QLALLCTKRYPSERPTMQEVAR 882
+ C + P RPT +E+ +
Sbjct: 246 EFVEACLNKDPRFRPTAKELLK 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P + +F E+ + S+ HRN++ L+G L+P ++ + GSL D L L
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLL 110
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
T + AV A+G+ YL + R IHRD+ + N+L+ + DFG+ R +P
Sbjct: 111 G--TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 773 PHASTFVLGT-----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H +V+ + PE T + SD + FG+ L E+ T
Sbjct: 166 DH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P + +F E+ + S+ HRN++ L+G L+P ++ + GSL D L L
Sbjct: 62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLL 120
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
T + AV A+G+ YL + R IHRD+ + N+L+ + DFG+ R +P
Sbjct: 121 G--TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 773 PHASTFVLGTI--GYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H + + PE T + SD + FG+ L E+ T
Sbjct: 176 DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYN-QYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA VYK K + +A K+ + + L ++ E++ + S H NIV L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL---- 100
Query: 683 SPYGNLLFYDYMVNGSLWDLLH----GPSKKVKLDWE---TRLKIAVGAAQGLAYLHHDC 735
+ +Y+ +LW L+ G V L+ E T +I V Q L L++
Sbjct: 101 ----DAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE--YAHT 793
+ +IIHRD+K+ NIL + D L+DFG++ + F+ GT ++ PE T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCET 211
Query: 794 SR---LNEKSDVYSFGIVLLEI 812
S+ + K+DV+S GI L+E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P + +F E+ + S+ HRN++ L+G L+P ++ + GSL D L L
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLL 110
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
T + AV A+G+ YL + R IHRD+ + N+L+ + DFG+ R +P
Sbjct: 111 G--TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 773 PHASTFVLGT-----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H +V+ + PE T + SD + FG+ L E+ T
Sbjct: 166 DH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 36/231 (15%)
Query: 612 MRSTENLSEKYIVGYGASSTVYKC--ALKNSRPIAVKKLYNQYPHNLREFETELETIGSI 669
+R + E ++G GA V K AL +SR A+KK+ L +E+ + S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKI-RHTEEKLSTILSEVXLLASL 59
Query: 670 RHRNIVSLHGYALS-----------PYGNLLF--YDYMVNGSLWDLLHGPSKKVKLDWET 716
H+ +V + L + LF +Y N +L+DL+H + + D
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 717 RLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA----- 771
RL + + L+Y+H IIHR++K NI IDE+ + + DFG+A+ + +
Sbjct: 120 RLFRQI--LEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 772 -----MPHAS---TFVLGTIGYIDPEYAH-TSRLNEKSDVYSFGIVLLEIL 813
+P +S T +GT Y+ E T NEK D YS GI+ E +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P + +F E+ + S+ HRN++ L+G L+P ++ + GSL D L L
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLL 110
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
T + AV A+G+ YL + R IHRD+ + N+L+ + DFG+ R +P
Sbjct: 111 G--TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 773 PHASTFVLGTI--GYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
H + + PE T + SD + FG+ L E+ T
Sbjct: 166 DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGSIRHRNIVSLH 678
+G G + ++ + +++ + K+ + PH + E+ S+ H+++V H
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
G+ + + SL +L +K + E R + G YLH + R
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 161
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
+IHRD+K N+ ++E+ + + DFG+A + + GT YI PE +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 799 KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858
+ DV+S G ++ +L GK + + K ++ ++ + ++P V S ++K
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINP------VAASLIQK 274
Query: 859 TFQLALLCTKRYPSERPTMQEV 880
Q P+ RPT+ E+
Sbjct: 275 MLQTD-------PTARPTINEL 289
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
PH + E+ S+ H+++V HG+ + + SL +L +K
Sbjct: 56 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALT 113
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
+ E R + G YLH + R+IHRD+K N+ ++E+ + + DFG+A +
Sbjct: 114 EPEARYYLR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169
Query: 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
+ GT YI PE + + DV+S G ++ +L GK + + K
Sbjct: 170 ERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 228
Query: 833 ADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
++ ++ + ++P V S ++K Q P+ RPT+ E+
Sbjct: 229 KNEYSIPKHINP------VAASLIQKMLQTD-------PTARPTINEL 263
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
I G V+K L N +AVK Q + + E E+ + ++H N++ A
Sbjct: 22 IKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQF--IAA 77
Query: 683 SPYGN------LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC- 735
G+ L + GSL D L G + W +A ++GL+YLH D
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 736 -------NPRIIHRDVKSSNILIDENFDAHLSDFGIA-RCIPTAMPHASTFVLGTIGYID 787
P I HRD KS N+L+ + A L+DFG+A R P P + +GT Y+
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 788 PEYAHTSRLNEKS-----DVYSFGIVLLEILTGKKAVD 820
PE + ++ D+Y+ G+VL E+++ KA D
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGSIRHRNIVSLH 678
+G G + ++ + +++ + K+ + PH + E+ S+ H+++V H
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
G+ + + SL +L +K + E R + G YLH + R
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 159
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
+IHRD+K N+ ++E+ + + DFG+A + + GT YI PE +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 218
Query: 799 KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858
+ DV+S G ++ +L GK + + K ++ ++ + ++P V S ++K
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINP------VAASLIQK 272
Query: 859 TFQLALLCTKRYPSERPTMQEV 880
Q P+ RPT+ E+
Sbjct: 273 MLQTD-------PTARPTINEL 287
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGS 668
R+ + +G G + Y+ +++ + K+ + PH + TE+ S
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ + ++V HG+ + + SL +L H K V + E R QG+
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVT-EPEARY-FMRQTIQGV 139
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDP 788
YLH N R+IHRD+K N+ ++++ D + DFG+A I + GT YI P
Sbjct: 140 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD-LCGTPNYIAP 195
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
E + + D++S G +L +L GK + I K ++ +V ++P S
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA 255
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE----FETELETIGSIRHRNIVSLH 678
++G GA V LKN+ + K+ N++ R F E + + + + I +LH
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 679 GYALSPYGNL-LFYDYMVNGSLWDLLHG-----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
YA NL L DY V G L LL P + + + + IA+ + L Y
Sbjct: 141 -YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF-YLAEMVIAIDSVHQLHY-- 196
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+HRD+K NIL+D N L+DFG + S+ +GT YI PE
Sbjct: 197 -------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 793 T-----SRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
R + D +S G+ + E+L G+ ES
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKK-LYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA VYK K + +A K + + L ++ E+E + + H IV L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 76
Query: 683 SPYGNLLFYDYMVNGSLWDLLH----GPSKKVKLDWE---TRLKIAVGAAQGLAYLHHDC 735
Y +G LW ++ G + L+ + T +I V Q L L+
Sbjct: 77 ----------YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
+ RIIHRD+K+ N+L+ D L+DFG++ + +F+ GT ++ PE
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCET 185
Query: 796 LNE-----KSDVYSFGIVLLEI 812
+ + K+D++S GI L+E+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGS 668
R+ + +G G + Y+ +++ + K+ + PH + TE+ S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ + ++V HG+ + + SL +L H K V + E R QG+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAV-TEPEARY-FMRQTIQGV 155
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDP 788
YLH N R+IHRD+K N+ ++++ D + DFG+A I + GT YI P
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX-LCGTPNYIAP 211
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
E + + D++S G +L +L GK + I K ++ +V ++P S
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKK-LYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA VYK K + +A K + + L ++ E+E + + H IV L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 84
Query: 683 SPYGNLLFYDYMVNGSLWDLLH----GPSKKVKLDWE---TRLKIAVGAAQGLAYLHHDC 735
Y +G LW ++ G + L+ + T +I V Q L L+
Sbjct: 85 ----------YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
+ RIIHRD+K+ N+L+ D L+DFG++ + +F+ GT ++ PE
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCET 193
Query: 796 LNE-----KSDVYSFGIVLLEI 812
+ + K+D++S GI L+E+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEM 215
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVK--------KLYNQYPHNLREFETELETI 666
EN K I+G G SS V +C K + AVK + LRE L+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE--ATLKEV 74
Query: 667 GSIR----HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
+R H NI+ L + L +D M G L+D L ++KV L + KI
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMR 131
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT 782
+ + LH I+HRD+K NIL+D++ + L+DFG + + S V GT
Sbjct: 132 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGT 186
Query: 783 IGYIDPEYAHTSR------LNEKSDVYSFGIVLLEILTG 815
Y+ PE S ++ D++S G+++ +L G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ----YPHNLREFETELETIGS 668
R+ + +G G + Y+ +++ + K+ + PH + TE+ S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ + ++V HG+ + + SL +L H K V + E R QG+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAV-TEPEARY-FMRQTIQGV 155
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDP 788
YLH N R+IHRD+K N+ ++++ D + DFG+A I + GT YI P
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD-LCGTPNYIAP 211
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
E + + D++S G +L +L GK + I K ++ +V ++P S
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA 271
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V YG Y A+K + ++ + EF E + + ++ H +V L+G
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM NG L + L + + + L++ + + YL + + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+ + N L+++ +SDFG++R + +S + + PE S+ + KSD+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
++FG+++ EI + L ++ + ++ E + + + L A K + +
Sbjct: 205 WAFGVLMWEIYS----------LGKMPYERFTNSETAEHIAQGLRLYRPHL-ASEKVYTI 253
Query: 863 ALLCTKRYPSERPTMQ 878
C ERPT +
Sbjct: 254 MYSCWHEKADERPTFK 269
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+ G V+K L N +AVK Q + + E E+ ++ ++H NI+ G
Sbjct: 31 VKARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIG--A 86
Query: 683 SPYGNLLFYD------YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC- 735
G + D + GSL D L K + W IA A+GLAYLH D
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 736 ------NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF-VLGTIGYIDP 788
P I HRD+KS N+L+ N A ++DFG+A T +GT Y+ P
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 789 EYAHTSRLNEKS-----DVYSFGIVLLEILTGKKAVD 820
E + ++ D+Y+ G+VL E+ + A D
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 42/216 (19%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
VG G V++ L + +AVK +++ ETE+ +RH NI+ ++
Sbjct: 16 VGKGRYGEVWR-GLWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 684 PYGN----LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
+ L Y +GSL+D L ++ L+ L++AV AA GLA+LH +
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV-------LGTIGYID 787
P I HRD KS N+L+ N ++D G+A S ++ +GT Y+
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLA----VMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 788 PEYAHTSRLNEK-----------SDVYSFGIVLLEI 812
PE L+E+ +D+++FG+VL EI
Sbjct: 186 PEV-----LDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 612 MRSTENLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNL--REFETELETIGS 668
M ENL +VG G+ V KC K++ R +A+KK + + E++ +
Sbjct: 24 MEKYENLG---LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+RH N+V+L L ++++ + L DL P+ LD++ K G+
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGI 137
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDP 788
+ H + IIHRD+K NIL+ ++ L DFG AR + A + T Y P
Sbjct: 138 GFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAP 193
Query: 789 E-YAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
E + + DV++ G ++ E+ G+ +S++ QL
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 46/282 (16%)
Query: 623 IVGYGASSTVYKCALKNS--RPIAVKKLYNQYPH--NLREFETELETIGSIRHR-NIVSL 677
++G G V K +K R A K +Y + R+F ELE + + H NI++L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 678 HGYALSPYGNL-LFYDYMVNGSLWDLLH-------------GPSKKVKLDWETRLKIAVG 723
G A G L L +Y +G+L D L S L + L A
Sbjct: 82 LG-ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
A+G+ YL + IHRD+ + NIL+ EN+ A ++DFG++R +V T+
Sbjct: 141 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTM 190
Query: 784 GYIDPEYAHTSRLN-----EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838
G + + LN SDV+S+G++L EI++ +L +
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKL 244
Query: 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ E + C D + + L C + P ERP+ ++
Sbjct: 245 PQGYRLEKPLNCDD-----EVYDLMRQCWREKPYERPSFAQI 281
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVK--------KLYNQYPHNLREFETELETI 666
EN K I+G G SS V +C K + AVK + LRE L+ +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE--ATLKEV 61
Query: 667 GSIR----HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
+R H NI+ L + L +D M G L+D L ++KV L + KI
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMR 118
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT 782
+ + LH I+HRD+K NIL+D++ + L+DFG + + V GT
Sbjct: 119 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGT 173
Query: 783 IGYIDPEYAHTSR------LNEKSDVYSFGIVLLEILTG 815
Y+ PE S ++ D++S G+++ +L G
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 46/282 (16%)
Query: 623 IVGYGASSTVYKCALKNS--RPIAVKKLYNQYP--HNLREFETELETIGSIRHR-NIVSL 677
++G G V K +K R A K +Y + R+F ELE + + H NI++L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 678 HGYALSPYGNL-LFYDYMVNGSLWDLLH-------------GPSKKVKLDWETRLKIAVG 723
G A G L L +Y +G+L D L S L + L A
Sbjct: 92 LG-ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
A+G+ YL + IHRD+ + NIL+ EN+ A ++DFG++R +V T+
Sbjct: 151 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTM 200
Query: 784 GYIDPEYAHTSRLN-----EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838
G + + LN SDV+S+G++L EI++ +L +
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKL 254
Query: 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ E + C D + + L C + P ERP+ ++
Sbjct: 255 PQGYRLEKPLNCDD-----EVYDLMRQCWREKPYERPSFAQI 291
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V YG Y A+K + ++ + EF E + + ++ H +V L+G
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM NG L + L + + + L++ + + YL + + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+ + N L+++ +SDFG++R + +S + + PE S+ + KSD+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
++FG+++ EI + L ++ + ++ E + + + L A K + +
Sbjct: 205 WAFGVLMWEIYS----------LGKMPYERFTNSETAEHIAQGLRLYRPHL-ASEKVYTI 253
Query: 863 ALLCTKRYPSERPTMQ 878
C ERPT +
Sbjct: 254 MYSCWHEKADERPTFK 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 627 GASSTVYKCALKNSRPIAVKKLYN-QYPHNLREFETELETIGSIRHRNIVSLHGYALSPY 685
G VYK K + +A K+ + + L ++ E++ + S H NIV L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL-------- 72
Query: 686 GNLLFYDYMVNGSLWDLLH----GPSKKVKLDWE---TRLKIAVGAAQGLAYLHHDCNPR 738
+ +Y+ +LW L+ G V L+ E T +I V Q L L++ + +
Sbjct: 73 LDAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGI-ARCIPTAMPHASTFVLGTIGYIDPE--YAHTSR 795
IIHRD+K+ NIL + D L+DFG+ A+ T + +F+ GT ++ PE TS+
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVMCETSK 187
Query: 796 ---LNEKSDVYSFGIVLLEI 812
+ K+DV+S GI L+E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 621 KYIVGYGASSTVYKCALKNS-RPIAVK-------KLYNQYPHNLREF-ETELETIGSIR- 670
K ++G G SS V +C + + AVK +L + +RE E + +
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG 158
Query: 671 HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAY 730
H +I++L S L +D M G L+D L ++KV L + I + +++
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEAVSF 215
Query: 731 LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
LH + I+HRD+K NIL+D+N LSDFG + + + GT GY+ PE
Sbjct: 216 LHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG--EKLRELCGTPGYLAPEI 270
Query: 791 AHTSR------LNEKSDVYSFGIVLLEILTG 815
S ++ D+++ G++L +L G
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V YG Y A+K + ++ + EF E + + ++ H +V L+G
Sbjct: 24 VVKYGKWRGQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM NG L + L + + + L++ + + YL + + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+ + N L+++ +SDFG++R + +S + + PE S+ + KSD+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 803 YSFGIVLLEILT-GKKAVDNESN 824
++FG+++ EI + GK + +N
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTN 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 127
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 128 FLQ--VRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 182
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 183 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 176/432 (40%), Gaps = 64/432 (14%)
Query: 82 IGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDL 141
+ +C L + D D+P +I+ LNL +NQL P+ T+ L LD
Sbjct: 8 VADCSHLKLTHIPD-----DLPSNIT------VLNLTHNQLRRLPPTNFTRYSQLAILDA 56
Query: 142 ARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDS 201
N ++ P L +L+ L L+ N L+ + T L D+ N++ +
Sbjct: 57 GFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNP 116
Query: 202 IGNCTSFEILDISYNQITG-EIPYNIGFLQVATLSLQGNKLTGKIPEVIGLM--QALAVL 258
N + LD+S+N ++ ++ + + L L NK+ E + + +L L
Sbjct: 117 FKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKL 176
Query: 259 DLSENELVGPIPPILGNLSYTGKLY--LHGN-----KLTGPIPPELGNMSKLSYLQLQNN 311
DLS N L P G GKL+ L N LT + EL N S + L L NN
Sbjct: 177 DLSSNPLKEFSP---GCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTS-IQNLSLANN 232
Query: 312 QLVGTIPAELG--KLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSF 369
QL+ T + K L +L+L+ NNL + S +L ++ N + P SF
Sbjct: 233 QLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSF 292
Query: 370 RNLGSLTYLNLSRNNFKGKVPTELGRIIN---------LDTLDLSVNN--------FSGS 412
L +L YL+L R K V I+ L+ L++ NN F+G
Sbjct: 293 YGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGL 352
Query: 413 VP------------------ASIGDLEH--LLTLNLSRNHLNGLLPAEFGNLRSIQTIDM 452
V + L H LLTLNL++NH++ + F L ++ +D+
Sbjct: 353 VSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDL 412
Query: 453 SFNQLSGSIPAE 464
N++ + +
Sbjct: 413 GLNEIEQKLSGQ 424
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 172/432 (39%), Gaps = 85/432 (19%)
Query: 53 EISP----SIGDLRNLQSIDFQGN-KLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSIS 107
E SP +IG L L + Q N LT ++ E+ N S+ ++ L++N L + S
Sbjct: 185 EFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNT-SIQNLSLANNQLLATSESTFS 243
Query: 108 KLK--QLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGL 165
LK L L+L N L + + +P+L+ L L N + PR Y L+YL L
Sbjct: 244 GLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSL 303
Query: 166 RGNALTGMLS----PDMCQLTGLW-----YFDVRGNNLTGTIPDSIGNCTSFEILDISYN 216
+ +S P++ + W Y ++ NN+ T ++ S + L +S
Sbjct: 304 KRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKT 363
Query: 217 QITGEIPYNIGFLQVA-----TLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPP 271
+ + N F+ +A TL+L N ++ + L +LDL NE I
Sbjct: 364 FTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNE----IEQ 419
Query: 272 ILGNLSYTG-----KLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ 326
L + G ++YL NK YLQL + +P+ L++
Sbjct: 420 KLSGQEWRGLRNIFEIYLSYNK----------------YLQLSTSSF-ALVPS----LQR 458
Query: 327 LFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFK 386
L +A N++ IS PS FR L +LT L+LS NN
Sbjct: 459 LMLRRVALKNVD------IS-------------------PSPFRPLRNLTILDLSNNNIA 493
Query: 387 GKVPTELGRIINLDTLDLSVNNFS--------GSVPASIGDLEHLLTLNLSRNHLNGLLP 438
L + NL+ LD NN + G + L HL LNL N L+ +
Sbjct: 494 NINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPV 553
Query: 439 AEFGNLRSIQTI 450
F NL +++I
Sbjct: 554 GVFKNLFELKSI 565
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 104
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 105 FLQ--VRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 159
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 160 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVK--------KLYNQYPHNLREFETELETI 666
EN K I+G G SS V +C K + AVK + LRE L+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE--ATLKEV 74
Query: 667 GSIR----HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
+R H NI+ L + L +D M G L+D L ++KV L + KI
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMR 131
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT 782
+ + LH I+HRD+K NIL+D++ + L+DFG + + V GT
Sbjct: 132 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGT 186
Query: 783 IGYIDPEYAHTSR------LNEKSDVYSFGIVLLEILTG 815
Y+ PE S ++ D++S G+++ +L G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V YG Y A+K + ++ + EF E + + ++ H +V L+G
Sbjct: 23 VVKYGKWRGQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM NG L + L + + + L++ + + YL + + +HR
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+ + N L+++ +SDFG++R + +S + + PE S+ + KSD+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 803 YSFGIVLLEILT-GKKAVDNESN 824
++FG+++ EI + GK + +N
Sbjct: 189 WAFGVLMWEIYSLGKMPYERFTN 211
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYA 681
+VG G VYK + +A K+ + E + E+ + HRNI + +G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 682 LS--PYGN----LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+ P G L ++ GS+ DL+ +K L E I +GL++LH
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSHLHQH- 148
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR 795
++IHRD+K N+L+ EN + L DFG++ + + +TF+ GT ++ PE
Sbjct: 149 --KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDE 205
Query: 796 -----LNEKSDVYSFGIVLLEILTG 815
+ KSD++S GI +E+ G
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 99
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 100 FLQ--VRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 155 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V YG Y A+K + ++ + EF E + + ++ H +V L+G
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM NG L + L + + + L++ + + YL + + +HR
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+ + N L+++ +SDFG++R + +S + + PE S+ + KSD+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 803 YSFGIVLLEILT-GKKAVDNESN 824
++FG+++ EI + GK + +N
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTN 207
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 99
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 100 FLQ--VRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 155 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 101
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 102 FLQ--VRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 156
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 157 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 102
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 103 FLQ--VRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 157
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 158 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 96
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 97 FLQ--VRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 151
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 152 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 99
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 100 FLQ--VRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 155 FGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V++ + +AVK +++ E E+ +RH NI+
Sbjct: 50 IGKGRFGEVWRGKWRGEE-VAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107
Query: 684 PYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
G L DY +GSL+D L+ + V E +K+A+ A GLA+LH +
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA---MPHASTFVLGTIGYIDPEYA 791
P I HRD+KS NIL+ +N ++D G+A +A + A +GT Y+ PE
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 792 HTSRLN-------EKSDVYSFGIVLLEI 812
S +N +++D+Y+ G+V EI
Sbjct: 224 DDS-INMKHFESFKRADIYAMGLVFWEI 250
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+NL ++G G VYK +L + RP+AVK N E + + + H NI
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIA 70
Query: 676 SL-----HGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAY 730
A LL +Y NGSL L + DW + ++A +GLAY
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAY 126
Query: 731 LHHDC------NPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-------PTAMPHAST 777
LH + P I HRD+ S N+L+ + +SDFG++ + P +A+
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 778 FVLGTIGYIDPEYAHTS---RLNEKS----DVYSFGIVLLEIL 813
+GTI Y+ PE + R E + D+Y+ G++ EI
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V YG Y A+K + ++ + EF E + + ++ H +V L+G
Sbjct: 30 VVKYGKWRGQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM NG L + L + + + L++ + + YL + + +HR
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+ + N L+++ +SDFG++R + +S + + PE S+ + KSD+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQL 862
++FG+++ EI + L ++ + ++ E + + + L A K + +
Sbjct: 196 WAFGVLMWEIYS----------LGKMPYERFTNSETAEHIAQGLRLYRPHL-ASEKVYTI 244
Query: 863 ALLCTKRYPSERPTMQ 878
C ERPT +
Sbjct: 245 MYSCWHEKADERPTFK 260
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V YG Y A+K + ++ + EF E + + ++ H +V L+G
Sbjct: 24 VVKYGKWRGQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+ +YM NG L + L + + + L++ + + YL + + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
D+ + N L+++ +SDFG++R + +S + + PE S+ + KSD+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 803 YSFGIVLLEILT-GKKAVDNESN 824
++FG+++ EI + GK + +N
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTN 212
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K + + A K + + + R E E E+ + IRH NI++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L + + G+ YLH +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLH---S 147
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
RI H D+K NI L+D+N L DFGIA I + F GT ++ PE +
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--GTPEFVAPEIVN 205
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 206 YEPLGLEADMWSIGVITYILLSG 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K + + A K + + + R E E E+ + IRH NI++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L + + G+ YLH +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLH---S 133
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
RI H D+K NI L+D+N L DFGIA I + F GT ++ PE +
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--GTPEFVAPEIVN 191
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V++ + +AVK +++ E E+ +RH NI+
Sbjct: 37 IGKGRFGEVWRGKWRGE-EVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 94
Query: 684 PYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
G L DY +GSL+D L+ + V E +K+A+ A GLA+LH +
Sbjct: 95 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA---MPHASTFVLGTIGYIDPEYA 791
P I HRD+KS NIL+ +N ++D G+A +A + A +GT Y+ PE
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 792 HTSRLN-------EKSDVYSFGIVLLEI 812
S +N +++D+Y+ G+V EI
Sbjct: 211 DDS-INMKHFESFKRADIYAMGLVFWEI 237
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNAM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCA---LKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 26 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 194
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V++ + +AVK +++ E E+ +RH NI+
Sbjct: 17 IGKGRFGEVWRGKWRGE-EVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 74
Query: 684 PYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
G L DY +GSL+D L+ + V E +K+A+ A GLA+LH +
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA---MPHASTFVLGTIGYIDPEYA 791
P I HRD+KS NIL+ +N ++D G+A +A + A +GT Y+ PE
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 792 HTSRLN-------EKSDVYSFGIVLLEI 812
S +N +++D+Y+ G+V EI
Sbjct: 191 DDS-INMKHFESFKRADIYAMGLVFWEI 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 47/268 (17%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+AVK L N P LR+ +E + + H +++ L+G LL +Y GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 702 LLHGPSKKV--------------KLDWETRLKIAVG--------AAQGLAYLHHDCNPRI 739
L S+KV LD + +G +QG+ YL ++
Sbjct: 116 FLR-ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKL 171
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE- 798
+HRD+ + NIL+ E +SDFG++R + ++V + G I ++ L +
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVY----EEDSYVKRSQGRIPVKWMAIESLFDH 227
Query: 799 ----KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854
+SDV+SFG++L EI+T N + I + N + E C +
Sbjct: 228 IYTTQSDVWSFGVLLWEIVT------LGGNPYPGIPPERLFNLLKTGHRMERPDNCSE-- 279
Query: 855 AVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ ++L L C K+ P +RP ++++
Sbjct: 280 ---EMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 26/244 (10%)
Query: 600 HMDMAIHTF--DDIMRSTENLSEKYI----VGYGASSTVYKCAL---KNSRPIAVKKL-- 648
HM TF ++ ++ + E+Y VG GA +V CA K +AVKKL
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSV--CAAFDTKTGHRVAVKKLSR 77
Query: 649 -YNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD--YMVNGSLWDLLHG 705
+ H R + EL + ++H N++ L +P +L ++ Y+V + L+
Sbjct: 78 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNN 135
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
K KL + + +GL Y+H + IIHRD+K SN+ ++E+ + + DFG+A
Sbjct: 136 IVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 766 RCIPTAMPHASTFVLGTIGYIDPEYA-HTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN 824
R M T + T Y PE + N+ D++S G ++ E+LTG+ +
Sbjct: 193 RHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 825 LHQL 828
+ QL
Sbjct: 249 IDQL 252
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K + + A K + + + R E E E+ + IRH NI++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L + + G+ YLH +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLH---S 126
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
RI H D+K NI L+D+N L DFGIA I + F GT ++ PE +
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--GTPEFVAPEIVN 184
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 185 YEPLGLEADMWSIGVITYILLSG 207
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 26/244 (10%)
Query: 600 HMDMAIHTF--DDIMRSTENLSEKYI----VGYGASSTVYKCAL---KNSRPIAVKKL-- 648
HM TF ++ ++ + E+Y VG GA +V CA K +AVKKL
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSV--CAAFDTKTGHRVAVKKLSR 76
Query: 649 -YNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD--YMVNGSLWDLLHG 705
+ H R + EL + ++H N++ L +P +L ++ Y+V + L+
Sbjct: 77 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNN 134
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
K KL + + +GL Y+H + IIHRD+K SN+ ++E+ + + DFG+A
Sbjct: 135 IVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 766 RCIPTAMPHASTFVLGTIGYIDPEYA-HTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN 824
R M T + T Y PE + N+ D++S G ++ E+LTG+ +
Sbjct: 192 RHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 825 LHQL 828
+ QL
Sbjct: 248 IDQL 251
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K S I A+K L+ H LR E+E + H NI+
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRR---EIEIQAHLHHPNILR 87
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+ Y L +Y G L+ L K D + I A L Y H
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYCH---G 141
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
++IHRD+K N+L+ + ++DFG + P+ + GT+ Y+ PE
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR---RKTMCGTLDYLPPEMIEGRMH 198
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESN 824
NEK D++ G++ E+L G ++ S+
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASH 226
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V++ + +AVK +++ E E+ +RH NI+
Sbjct: 14 IGKGRFGEVWRGKWRGE-EVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 71
Query: 684 PYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
G L DY +GSL+D L+ + V E +K+A+ A GLA+LH +
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA---MPHASTFVLGTIGYIDPEYA 791
P I HRD+KS NIL+ +N ++D G+A +A + A +GT Y+ PE
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 792 HTSRLN-------EKSDVYSFGIVLLEI 812
S +N +++D+Y+ G+V EI
Sbjct: 188 DDS-INMKHFESFKRADIYAMGLVFWEI 214
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 26/244 (10%)
Query: 600 HMDMAIHTF--DDIMRSTENLSEKYI----VGYGASSTVYKCALKNSRP---IAVKKL-- 648
HM TF ++ ++ + E+Y VG GA +V CA +++ +AVKKL
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSV--CAAFDTKTGLRVAVKKLSR 77
Query: 649 -YNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD--YMVNGSLWDLLHG 705
+ H R + EL + ++H N++ L +P +L ++ Y+V + L+
Sbjct: 78 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNN 135
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
K KL + + +GL Y+H + IIHRD+K SN+ ++E+ + + DFG+A
Sbjct: 136 IVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 766 RCIPTAMPHASTFVLGTIGYIDPEYA-HTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN 824
R M T + T Y PE + N+ D++S G ++ E+LTG+ +
Sbjct: 193 RHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 825 LHQL 828
+ QL
Sbjct: 249 IDQL 252
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V++ + +AVK +++ E E+ +RH NI+
Sbjct: 12 IGKGRFGEVWRGKWRGE-EVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 69
Query: 684 PYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
G L DY +GSL+D L+ + V E +K+A+ A GLA+LH +
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA---MPHASTFVLGTIGYIDPEYA 791
P I HRD+KS NIL+ +N ++D G+A +A + A +GT Y+ PE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 792 HTSRLN-------EKSDVYSFGIVLLEI 812
S +N +++D+Y+ G+V EI
Sbjct: 186 DDS-INMKHFESFKRADIYAMGLVFWEI 212
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 26/244 (10%)
Query: 600 HMDMAIHTF--DDIMRSTENLSEKYI----VGYGASSTVYKCALKNSRP---IAVKKL-- 648
HM TF ++ ++ + E+Y VG GA +V CA +++ +AVKKL
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSV--CAAFDTKTGLRVAVKKLSR 76
Query: 649 -YNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD--YMVNGSLWDLLHG 705
+ H R + EL + ++H N++ L +P +L ++ Y+V + L+
Sbjct: 77 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNN 134
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
K KL + + +GL Y+H + IIHRD+K SN+ ++E+ + + DFG+A
Sbjct: 135 IVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 766 RCIPTAMPHASTFVLGTIGYIDPEYA-HTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN 824
R M T + T Y PE + N+ D++S G ++ E+LTG+ +
Sbjct: 192 RHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 825 LHQL 828
+ QL
Sbjct: 248 IDQL 251
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
+G G V++ + +AVK +++ E E+ +RH NI+
Sbjct: 11 IGKGRFGEVWRGKWRGE-EVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 684 PYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
G L DY +GSL+D L+ + V E +K+A+ A GLA+LH +
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA---MPHASTFVLGTIGYIDPEYA 791
P I HRD+KS NIL+ +N ++D G+A +A + A +GT Y+ PE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 792 HTSRLN-------EKSDVYSFGIVLLEI 812
S +N +++D+Y+ G+V EI
Sbjct: 185 DDS-INMKHFESFKRADIYAMGLVFWEI 211
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAPEIMLNWM 205
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 479
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ N L D
Sbjct: 480 FLQ--VRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 534
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAPEIMLNWM 205
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAPEIMLNWM 205
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCAL---KNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 41 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 97
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 98 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 153
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 209
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 42 VGSGAYGSV--CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 98
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 99 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 210
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCA---LKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 40 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 96
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 97 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 152
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 208
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGXVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 35 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 203
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 42 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 98
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 99 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 210
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 53 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 109
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 110 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 221
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 255
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 42 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 98
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 99 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 210
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 46/282 (16%)
Query: 623 IVGYGASSTVYKCALKNS--RPIAVKKLYNQYPH--NLREFETELETIGSIRHR-NIVSL 677
++G G V K +K R A K +Y + R+F ELE + + H NI++L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 678 HGYALSPYGNL-LFYDYMVNGSLWDLLH-------------GPSKKVKLDWETRLKIAVG 723
G A G L L +Y +G+L D L S L + L A
Sbjct: 89 LG-ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
A+G+ YL + IHR++ + NIL+ EN+ A ++DFG++R +V T+
Sbjct: 148 VARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTM 197
Query: 784 GYIDPEYAHTSRLN-----EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838
G + + LN SDV+S+G++L EI++ +L +
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKL 251
Query: 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ E + C D + + L C + P ERP+ ++
Sbjct: 252 PQGYRLEKPLNCDD-----EVYDLMRQCWREKPYERPSFAQI 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLYNQYPHN---LREFETELETIGSIRHRNIVSLH 678
++G G+ + VY+ ++ +A+K + + + ++ + E++ ++H +I+ L+
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
Y L + NG + L K + + G+ YLH +
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI--ITGMLYLH---SHG 132
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYIDPEYAHTSRLN 797
I+HRD+ SN+L+ N + ++DFG+A + MPH + L GT YI PE A S
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNYISPEIATRSAHG 190
Query: 798 EKSDVYSFGIVLLEILTGKKAVDNES 823
+SDV+S G + +L G+ D ++
Sbjct: 191 LESDVWSLGCMFYTLLIGRPPFDTDT 216
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 200
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCA---LKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 26 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 194
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 35 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 203
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 29 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 85
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 86 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 141
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 197
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 200
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 205
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSR---PIAVKKLYNQYPHNL--REFETELETIGSIRHRNIVSLH 678
VG GA V C+ + R +A+KKLY + L + EL + +RH N++ L
Sbjct: 33 VGSGAYGAV--CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 679 GYALSPYGNLL-FYD-YMVNGSLWDLLHGPSKKVKLDWETRLKIAV-GAAQGLAYLHHDC 735
+P L F D Y+V + L K KL E R++ V +GL Y+H
Sbjct: 91 D-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG-EDRIQFLVYQMLKGLRYIH--- 145
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
IIHRD+K N+ ++E+ + + DFG+AR + M T Y PE +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVILNWM 201
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
R + D++S G ++ E++TGK +L QL
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 36 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 92
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 93 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 204
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 35 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 203
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 41 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 97
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 98 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 153
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 209
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 28 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 84
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 85 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 140
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 196
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 27 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 83
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 84 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 195
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 229
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
YG+ + Y L+ +AVKKL + H R + EL + ++H N++ L
Sbjct: 40 AYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD-V 95
Query: 682 LSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739
+P ++ + Y+V + L+ K L E + +GL Y+H + I
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SAGI 152
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE----YAHTSR 795
IHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE + H
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPEIMLNWMH--- 205
Query: 796 LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV---DPEV 846
N+ D++S G ++ E+L GK + QL +ME V PEV
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQL-------KRIMEVVGTPSPEV 252
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 27 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 83
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 84 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 195
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 200
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 26 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 194
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 200
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
+G GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 35 IGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 203
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCAL---KNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M + FV T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFV-ATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
VG G V++ + + +AVK +++ ETEL +RH NI+ ++
Sbjct: 45 VGKGRYGEVWRGSWQGEN-VAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 684 PYGN----LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
+ L Y GSL+D L + LD + L+I + A GLA+LH +
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL--------GTIGYI 786
P I HRD+KS NIL+ +N ++D G+A M ST L GT Y+
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 787 DPEY-AHTSRLN-----EKSDVYSFGIVLLEILTGKKAVDN 821
PE T +++ ++ D+++FG+VL E+ ++ V N
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 252
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 641 RPIAVKKLYNQYPHNL-REFETELETIGSI-RHRNIVSLHGYALSPYGNLL-FYDYMVNG 697
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 698 SLWDLLHG------PSKKVKLDW---ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSN 748
+L L P K + D+ E + + A+G+ +L + + IHRD+ + N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 749 ILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSF 805
IL+ E + DFG+AR I P + + + ++ PE +SDV+SF
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSF 232
Query: 806 GIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAVRKTFQL 862
G++L EI + + + + + + T M A D PE+ T +D
Sbjct: 233 GVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLD---------- 282
Query: 863 ALLCTKRYPSERPTMQEV 880
C PS+RPT E+
Sbjct: 283 ---CWHGEPSQRPTFSEL 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 20/213 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE----FETELETIGSIRHRNIVSLH 678
++G GA V +KN+ I K+ N++ R F E + + + + I +LH
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 679 GYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIA--VGAAQGLAYLHHDC 735
YA +L L DY V G L LL K+ D R I V A + LH+
Sbjct: 141 -YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM-ARFYIGEMVLAIDSIHQLHY-- 196
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT-- 793
+HRD+K N+L+D N L+DFG + S+ +GT YI PE
Sbjct: 197 ----VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 794 ---SRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
+ + D +S G+ + E+L G+ ES
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCAL---KNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M + FV T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFV-ATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 36 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 92
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 93 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 204
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 20/213 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE----FETELETIGSIRHRNIVSLH 678
++G GA V +KN+ I K+ N++ R F E + + + + I +LH
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 679 GYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIA--VGAAQGLAYLHHDC 735
YA +L L DY V G L LL K+ D R I V A + LH+
Sbjct: 157 -YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM-ARFYIGEMVLAIDSIHQLHY-- 212
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT-- 793
+HRD+K N+L+D N L+DFG + S+ +GT YI PE
Sbjct: 213 ----VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 794 ---SRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
+ + D +S G+ + E+L G+ ES
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCA---LKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 26 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M + FV T Y PE +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFV-ATRWYRAPEIMLNWM 194
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 624 VGYGASSTVYKCA-LKNSRPIAVKK--LYNQYPHNLR-EFETELETIGSIRHRNIVSLHG 679
+G G S VY+ A L + P+A+KK +++ R + E++ + + H N++ +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 680 YALSPYGNLLFYDYMVNGSLWDLL-HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
+ + + G L ++ H +K + T K V L ++H + R
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRR 156
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
++HRD+K +N+ I L D G+ R + A + V GT Y+ PE H + N
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 215
Query: 799 KSDVYSFGIVLLEI 812
KSD++S G +L E+
Sbjct: 216 KSDIWSLGCLLYEM 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCAL---KNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 36 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 92
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 93 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 204
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
VG G V++ + + +AVK +++ ETEL +RH NI+ ++
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 684 PYGN----LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
+ L Y GSL+D L + LD + L+I + A GLA+LH +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL--------GTIGYI 786
P I HRD+KS NIL+ +N ++D G+A M ST L GT Y+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 787 DPEY-AHTSRLN-----EKSDVYSFGIVLLEILTGKKAVDN 821
PE T +++ ++ D+++FG+VL E+ ++ V N
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 630 STVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689
+T YK K + ++L + ++R E E+ + +RH +I+ L+ +P ++
Sbjct: 28 ATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLYDVITTPTDIVM 86
Query: 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNI 749
+Y G L+D + K++ D R + A + Y H +I+HRD+K N+
Sbjct: 87 VIEY-AGGELFDYI-VEKKRMTEDEGRRFFQQIICA--IEYCHRH---KIVHRDLKPENL 139
Query: 750 LIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEK------SDVY 803
L+D+N + ++DFG++ + F+ + G P YA +N K DV+
Sbjct: 140 LLDDNLNVKIADFGLSNIMTDG-----NFLKTSCG--SPNYAAPEVINGKLYAGPEVDVW 192
Query: 804 SFGIVLLEILTGKKAVDNE 822
S GIVL +L G+ D+E
Sbjct: 193 SCGIVLYVMLVGRLPFDDE 211
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 36 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 92
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 93 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 204
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS 683
VG G V++ + + +AVK +++ ETEL +RH NI+ ++
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 684 PYGN----LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---- 735
+ L Y GSL+D L + LD + L+I + A GLA+LH +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 736 -NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL--------GTIGYI 786
P I HRD+KS NIL+ +N ++D G+A M ST L GT Y+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 787 DPEY-AHTSRLN-----EKSDVYSFGIVLLEILTGKKAVDN 821
PE T +++ ++ D+++FG+VL E+ ++ V N
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 23/231 (9%)
Query: 610 DIMRSTENLSEKYI----VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNL--REFETE 662
D+ ++ L + Y+ VG GA +V K S +A+KKL + + + E
Sbjct: 14 DVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRE 73
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIA 721
L + ++H N++ L +P +L FYD+ + +K E +
Sbjct: 74 LLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 722 VGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG 781
+GL Y+H + ++HRD+K N+ ++E+ + + DFG+AR M T +
Sbjct: 133 YQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM----TGYVV 185
Query: 782 TIGYIDPE----YAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
T Y PE + H N+ D++S G ++ E+LTGK + L QL
Sbjct: 186 TRWYRAPEVILSWMH---YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 99
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ L D
Sbjct: 100 FLQ--VRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGD 154
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 155 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+ R M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
YG+ + Y L+ +AVKKL + H R + EL + ++H N++ L
Sbjct: 32 AYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD-V 87
Query: 682 LSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739
+P ++ + Y+V + L+ K L E + +GL Y+H + I
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGI 144
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTSRLNE 798
IHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE + N+
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLARQADEEM----TGYVATRWYRAPEIMLNWMHYNQ 200
Query: 799 KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV---DPEV 846
D++S G ++ E+L GK + QL +ME V PEV
Sbjct: 201 TVDIWSVGCIMAELLQGKALFPGSDYIDQL-------KRIMEVVGTPSPEV 244
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+AVK L N P LR+ +E + + H +++ L+G LL +Y GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 702 LLHGPSKKV--------------KLDWETRLKIAVG--------AAQGLAYLHHDCNPRI 739
L S+KV LD + +G +QG+ YL ++
Sbjct: 116 FLR-ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKL 171
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE- 798
+HRD+ + NIL+ E +SDFG++R + + V + G I ++ L +
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVY----EEDSXVKRSQGRIPVKWMAIESLFDH 227
Query: 799 ----KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854
+SDV+SFG++L EI+T N + I + N + E C +
Sbjct: 228 IYTTQSDVWSFGVLLWEIVT------LGGNPYPGIPPERLFNLLKTGHRMERPDNCSE-- 279
Query: 855 AVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ ++L L C K+ P +RP ++++
Sbjct: 280 ---EMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 31/292 (10%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK---NSRP---IAVKKLYNQYPHNLR- 657
++ D+ + E ++ +G G+ VY+ K P +A+K + R
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ F+L +C + P RP+ E+
Sbjct: 244 -------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 283
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K ++ I A+K L+ H LR E+E +RH NI+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILR 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
++ Y L ++ G L+ L K + D + A L Y H
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYCHER-- 133
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
++IHRD+K N+L+ + ++DFG + P+ + GT+ Y+ PE
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---MCGTLDYLPPEMIEGKTH 189
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESN 824
+EK D++ G++ E L G D+ S+
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K ++ I A+K L+ H LR E+E +RH NI+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILR 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
++ Y L ++ G L+ L K + D + A L Y H
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYCHER-- 133
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
++IHRD+K N+L+ + ++DFG + P+ + GT+ Y+ PE
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---MCGTLDYLPPEMIEGKTH 189
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESN 824
+EK D++ G++ E L G D+ S+
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 624 VGYGASSTVYKCALKNSRPI-AVKKLYNQ------YPHNLREFETELETIGSIRHRNIVS 676
+G G VY K ++ I A+K L+ H LR E+E +RH NI+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILR 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
++ Y L ++ G L+ L K + D + A L Y H
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYCHER-- 134
Query: 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL 796
++IHRD+K N+L+ + ++DFG + P+ + GT+ Y+ PE
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---MCGTLDYLPPEMIEGKTH 190
Query: 797 NEKSDVYSFGIVLLEILTGKKAVDNESN 824
+EK D++ G++ E L G D+ S+
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P +L++ E+ + + H NIV L + L +Y G ++D L + +
Sbjct: 52 PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK 111
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
+ ++ + V A Q Y H RI+HRD+K+ N+L+D + + ++DFG + T
Sbjct: 112 EARSKFRQIVSAVQ---YCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEF-TVG 164
Query: 773 PHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
TF G+ Y PE + + + DV+S G++L +++G D + NL +L
Sbjct: 165 GKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKEL 219
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 26/244 (10%)
Query: 600 HMDMAIHTF--DDIMRSTENLSEKYI----VGYGASSTVYKCAL---KNSRPIAVKKL-- 648
HM TF ++ ++ + E+Y VG GA +V CA K +AVKKL
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSV--CAAFDTKTGHRVAVKKLSR 77
Query: 649 -YNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD--YMVNGSLWDLLHG 705
+ H R + EL + ++H N++ L +P +L ++ Y+V + L+
Sbjct: 78 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNN 135
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
K KL + + +GL Y+H + IIHRD+K SN+ ++E+ + + DFG+A
Sbjct: 136 IVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 766 RCIPTAMPHASTFVLGTIGYIDPEYA-HTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN 824
R M + T Y PE + N+ D++S G ++ E+LTG+ +
Sbjct: 193 RHTDDEM----XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 825 LHQL 828
+ QL
Sbjct: 249 IDQL 252
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL----KNSR-PIAVKKLY-NQYPHNLREFETELE 664
I++ TE L + ++G GA TVYK +N + P+A+K L N P +E E
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ + + L G L+ L+ M G L D H + +L + L +
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQLV-TQLMPYGCLLD--HVRENRGRLGSQDLLNWCMQI 128
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC--IPTAMPHASTFVLGT 782
A+G++YL + R++HRD+ + N+L+ ++DFG+AR I HA +
Sbjct: 129 AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV-P 184
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E R +SDV+S+G+ + E++T G K D
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 641 RPIAVKKLYNQYPHNL-REFETELETIGSI-RHRNIVSLHGYALSPYGNLL-FYDYMVNG 697
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 698 SLWDLLHG------PSKKVKLDW---ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSN 748
+L L P K + D+ E + + A+G+ +L + + IHRD+ + N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 749 ILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSF 805
IL+ E + DFG+AR I P + + + ++ PE +SDV+SF
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSF 232
Query: 806 GIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAVRKTFQL 862
G++L EI + + + + + + T M A D PE+ T +D
Sbjct: 233 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 282
Query: 863 ALLCTKRYPSERPTMQEV 880
C PS+RPT E+
Sbjct: 283 ---CWHGEPSQRPTFSEL 297
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
YG+ + Y L+ +AVKKL + H R + EL + ++H N++ L
Sbjct: 40 AYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD-V 95
Query: 682 LSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739
+P ++ + Y+V + L+ K L E + +GL Y+H + I
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGI 152
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTSRLNE 798
IHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE + N+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPEIMLNWMHYNQ 208
Query: 799 KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV---DPEV 846
D++S G ++ E+L GK + QL +ME V PEV
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQL-------KRIMEVVGTPSPEV 252
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 47/281 (16%)
Query: 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLH 678
E G G V K A+K + A + +EL+ + + +H NIV+L
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---------WETR--LKIAVGAAQG 727
G L+ +Y G L + L S+ ++ D TR L + AQG
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQG 176
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT----I 783
+A+L + IHRDV + N+L+ A + DFG+AR I M ++ V G +
Sbjct: 177 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSNYIVKGNARLPV 230
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIMSKADDNTVM 839
++ PE +SDV+S+GI+L EI L + S ++L+ K
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV--KDGYQMAQ 288
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A P + + + C P+ RPT Q++
Sbjct: 289 PAFAP------------KNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 41/297 (13%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK---NSRP---IAVKKLYNQYPHNLR- 657
++ D+ + E ++ +G G+ VY+ K P +A+K + R
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLH------------G 705
EF E + ++V L G L+ + M G L L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
P K+ +++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+
Sbjct: 134 PPSLSKM-----IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 766 RCI-PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNES 823
R I T L + ++ PE SDV+SFG+VL EI T ++ S
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
Query: 824 NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
N L VME + C D+ F+L +C + P RP+ E+
Sbjct: 246 NEQVL-------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 290
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + D+G+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA+S VY+C K + +P A+K L + TE+ + + H NI+ L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P L + + G L+D + + D +K + + +AYLH + I+HR
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL---EAVAYLHENG---IVHR 172
Query: 743 DVKSSNILIDE---NFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+K N+L + ++DFG+++ + + + V GT GY PE +
Sbjct: 173 DLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYCAPEILRGCAYGPE 230
Query: 800 SDVYSFGIVLLEILTG 815
D++S GI+ +L G
Sbjct: 231 VDMWSVGIITYILLCG 246
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 31/292 (10%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK---NSRP---IAVKKLYNQYPHNLR- 657
++ D+ + E ++ +G G+ VY+ K P +A+K + R
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 272
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ F+L +C + P RP+ E+
Sbjct: 273 -------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 312
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 47/281 (16%)
Query: 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLH 678
E G G V K A+K + A + +EL+ + + +H NIV+L
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---------WETR--LKIAVGAAQG 727
G L+ +Y G L + L S+ ++ D TR L + AQG
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG 176
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT----I 783
+A+L + IHRDV + N+L+ A + DFG+AR I M ++ V G +
Sbjct: 177 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSNYIVKGNARLPV 230
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIMSKADDNTVM 839
++ PE +SDV+S+GI+L EI L + S ++L+ K
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV--KDGYQMAQ 288
Query: 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A P + + + C P+ RPT Q++
Sbjct: 289 PAFAP------------KNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 41/297 (13%)
Query: 605 IHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK---NSRP---IAVKKLYNQYPHNLR- 657
++ D+ + E ++ +G G+ VY+ K P +A+K + R
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLH------------G 705
EF E + ++V L G L+ + M G L L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
P K+ +++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+
Sbjct: 134 PPSLSKM-----IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 766 RCI-PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNES 823
R I T L + ++ PE SDV+SFG+VL EI T ++ S
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
Query: 824 NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
N L VME + C D+ F+L +C + P RP+ E+
Sbjct: 246 NEQVL-------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 290
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVNGSL 699
+AVK L + P + ++ E++ + ++ H +I+ G L +Y+ GSL
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759
D L P + L L A +G+AYLH IHRD+ + N+L+D + +
Sbjct: 123 RDYL--PRHSIGL--AQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKI 175
Query: 760 SDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+A+ +P G + + PE + SDV+SFG+ L E+LT
Sbjct: 176 GDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 10/218 (4%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKL-YNQYPHNLREFETELETI 666
+D++++ E L E G G + C + +A+K + N +L +TE+E +
Sbjct: 5 YDELLKYYE-LHETIGTG-GFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
++RH++I L+ + + +Y G L+D + S+ + ETR+ +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI--ISQDRLSEEETRV-VFRQIVS 119
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
+AY+H + HRD+K N+L DE L DFG+ + G++ Y
Sbjct: 120 AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 787 DPEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823
PE S L ++DV+S GI+L ++ G D+++
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN 214
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 53 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 109
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 110 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M + T Y PE +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----XGYVATRWYRAPEIMLNWM 221
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 255
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCA---LKNSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSL 677
VG GA +V C+ +K+ IAVKKL + H R + EL + ++H N++ L
Sbjct: 59 VGSGAYGSV--CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 115
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 116 LD-VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 171
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DFG+AR M T + T Y PE +
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 227
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N D++S G ++ E+LTG+ +++QL
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQL 261
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 27/233 (11%)
Query: 610 DIMRSTENLSEKYI----VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNL--REFETE 662
D+ ++ L + Y+ VG GA +V K S +A+KKL + + + E
Sbjct: 32 DVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRE 91
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLL-FYDY-----MVNGSLWDLLHGPSKKVKLDWET 716
L + ++H N++ L +P +L FYD+ + L ++ + K+ +
Sbjct: 92 LLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-- 148
Query: 717 RLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776
+ +GL Y+H + ++HRD+K N+ ++E+ + + DFG+AR M
Sbjct: 149 ---LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM---- 198
Query: 777 TFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
T + T Y PE + N+ D++S G ++ E+LTGK + L QL
Sbjct: 199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 251
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+A+K N ++RE F E T+ H +IV L G ++ + + G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 479
Query: 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761
L +K LD + + A + LAYL + R +HRD+ + N+L+ L D
Sbjct: 480 FLQ--VRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGD 534
Query: 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
FG++R + + + ++ I ++ PE + R SDV+ FG+ + EIL
Sbjct: 535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVS 676
+ S I+G G VY C ++ + K ++ +++ ET ++ R ++S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-----LALNERIMLS 244
Query: 677 LHGYALSPYGNLLFYDYMVNGSL---WDLLHGPSKKVKLDWE---TRLKIAVGAAQGLAY 730
L P+ + Y + L DL++G L + + AA+ +
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 731 LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
L H N +++RD+K +NIL+DE+ +SD G+A PHAS +GT GY+ PE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEV 361
Query: 791 AHTS-RLNEKSDVYSFGIVLLEILTG 815
+ +D +S G +L ++L G
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVS 676
+ S I+G G VY C ++ + K ++ +++ ET ++ R ++S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-----LALNERIMLS 244
Query: 677 LHGYALSPYGNLLFYDYMVNGSL---WDLLHGPSKKVKLDWE---TRLKIAVGAAQGLAY 730
L P+ + Y + L DL++G L + + AA+ +
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 731 LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
L H N +++RD+K +NIL+DE+ +SD G+A PHAS +GT GY+ PE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEV 361
Query: 791 AHTS-RLNEKSDVYSFGIVLLEILTG 815
+ +D +S G +L ++L G
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVS 676
+ S I+G G VY C ++ + K ++ +++ ET ++ R ++S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-----LALNERIMLS 244
Query: 677 LHGYALSPYGNLLFYDYMVNGSL---WDLLHGPSKKVKLDWE---TRLKIAVGAAQGLAY 730
L P+ + Y + L DL++G L + + AA+ +
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 731 LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
L H N +++RD+K +NIL+DE+ +SD G+A PHAS +GT GY+ PE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEV 361
Query: 791 AHTS-RLNEKSDVYSFGIVLLEILTG 815
+ +D +S G +L ++L G
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYP----HNLREFETELETIGSIRHRNIVSLHG 679
+G G+ V +++ + K N+ + +R EL+ + + H +V+L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739
+ D ++ G DL + + V ET L YL N RI
Sbjct: 83 SFQDEEDMFMVVDLLLGG---DLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRI 136
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR---L 796
IHRD+K NIL+DE+ H++DF IA +P T + GT Y+ PE + +
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--QITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 797 NEKSDVYSFGIVLLEILTGKK 817
+ D +S G+ E+L G++
Sbjct: 195 SFAVDWWSLGVTAYELLRGRR 215
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVS 676
+ S I+G G VY C ++ + K ++ +++ ET ++ R ++S
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-----LALNERIMLS 243
Query: 677 LHGYALSPYGNLLFYDYMVNGSL---WDLLHGPSKKVKLDWE---TRLKIAVGAAQGLAY 730
L P+ + Y + L DL++G L + + AA+ +
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 731 LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
L H N +++RD+K +NIL+DE+ +SD G+A PHAS +GT GY+ PE
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEV 360
Query: 791 AHTS-RLNEKSDVYSFGIVLLEILTG 815
+ +D +S G +L ++L G
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 643 IAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGN---LLFYDYMVNGS 698
+AVK L P + ++ E++ + ++ H +I+ G G L +Y+ GS
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGS 104
Query: 699 LWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
L D L P + L L A +G+AYLH + IHR++ + N+L+D +
Sbjct: 105 LRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVK 157
Query: 759 LSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ DFG+A+ +P + G + + PE + SDV+SFG+ L E+LT
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHG- 679
+G GA V + + +A+KK+ N + N + EL+ + +H NI+++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 680 -YALSPYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
PYG + D M L ++H L E +GL Y+H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMH-- 176
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV---LGTIGYIDPEYA 791
+ ++IHRD+K SN+L++EN + + DFG+AR + T+ F+ + T Y PE
Sbjct: 177 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 792 HT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
+ + D++S G + E+L ++ ++ +HQL
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL 273
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 47/268 (17%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701
+AVK L N P LR+ +E + + H +++ L+G LL +Y GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 702 LLHGPSKKV--------------KLDWETRLKIAVG--------AAQGLAYLHHDCNPRI 739
L S+KV LD + +G +QG+ YL +
Sbjct: 116 FLR-ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSL 171
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL--- 796
+HRD+ + NIL+ E +SDFG++R + + V + G I ++ L
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVY----EEDSXVKRSQGRIPVKWMAIESLFDH 227
Query: 797 --NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854
+SDV+SFG++L EI+T N + I + N + E C +
Sbjct: 228 IYTTQSDVWSFGVLLWEIVT------LGGNPYPGIPPERLFNLLKTGHRMERPDNCSE-- 279
Query: 855 AVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ ++L L C K+ P +RP ++++
Sbjct: 280 ---EMYRLMLQCWKQEPDKRPVFADISK 304
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ F+L +C + P RP+ E+
Sbjct: 245 -------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 284
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 641 RPIAVKKLYNQYPHNL-REFETELETIGSIRHR-NIVSLHGYALSPYGNLL-FYDYMVNG 697
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++ G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 698 SLWDLLHG------PSK-----KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKS 746
+L L P K K L E + + A+G+ +L + + IHRD+ +
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAA 176
Query: 747 SNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVY 803
NIL+ E + DFG+AR I P + + + ++ PE +SDV+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVW 234
Query: 804 SFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAVRKTF 860
SFG++L EI + + + + + + T M A D PE+ T +D
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-------- 286
Query: 861 QLALLCTKRYPSERPTMQEV 880
C PS+RPT E+
Sbjct: 287 -----CWHGEPSQRPTFSEL 301
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 113/280 (40%), Gaps = 49/280 (17%)
Query: 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLH 678
E G G V K A+K + A + +EL+ + + +H NIV+L
Sbjct: 56 EATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLL 108
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETR----------LKIAVGAAQGL 728
G L+ +Y G DLL+ +K + D + L + AQG+
Sbjct: 109 GACTHGGPVLVITEYCCYG---DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT----IG 784
A+L + IHRDV + N+L+ A + DFG+AR I M ++ V G +
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSNYIVKGNARLPVK 219
Query: 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIMSKADDNTVME 840
++ PE +SDV+S+GI+L EI L + S ++L+ K
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV--KDGYQMAQP 277
Query: 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A P + + + C P+ RPT Q++
Sbjct: 278 AFAP------------KNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 611 IMRSTENLSEKYIV----GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREF---ETEL 663
+M ++ S+ Y V G GA S V +C K + K+ N + R+F E E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 664 ETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
++H NIV LH + L +D + G L++ + + D ++ +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL- 138
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTFVL 780
+ +AY H + I+HR++K N+L+ L+DFG+A I A
Sbjct: 139 --ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFA 191
Query: 781 GTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
GT GY+ PE ++ D+++ G++L +L G
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVS----LH 678
YG S+ Y K +A+KK+ + + H T E++ + RH N++ L
Sbjct: 55 AYGMVSSAYDHVRKTR--VAIKKI-SPFEHQTYCQRTLREIQILLRFRHENVIGIRDILR 111
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
L ++ ++ L+ LL K +L + +GL Y+H +
Sbjct: 112 ASTLEAMRDVYIVQDLMETDLYKLL----KSQQLSNDHICYFLYQILRGLKYIH---SAN 164
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRL 796
++HRD+K SN+LI+ D + DFG+AR H T + T Y PE S+
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 797 NEKS-DVYSFGIVLLEILTGKKAVDNESNLHQL 828
KS D++S G +L E+L+ + + L QL
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHG- 679
+G GA V + + +A+KK+ N + N + EL+ + +H NI+++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 680 -YALSPYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
PYG + D M L ++H L E +GL Y+H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMH-- 175
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV---LGTIGYIDPEYA 791
+ ++IHRD+K SN+L++EN + + DFG+AR + T+ F+ + T Y PE
Sbjct: 176 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 792 HT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
+ + D++S G + E+L ++ ++ +HQL
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL 272
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P N+++ E+ + H N+V +G+ LF +Y G L+D + +
Sbjct: 48 PENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP 104
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TA 771
D + + G+ YLH I HRD+K N+L+DE + +SDFG+A
Sbjct: 105 DAQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 772 MPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
+ GT+ Y+ PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 623 IVGYGA-SSTVYKCALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ S+TV L SR A+K L N+ P+ RE + + + H
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 92
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P N+++ E+ + H N+V +G+ LF +Y G L+D + +
Sbjct: 49 PENIKK---EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP 105
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TA 771
D + + G+ YLH I HRD+K N+L+DE + +SDFG+A
Sbjct: 106 DAQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 772 MPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
+ GT+ Y+ PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLG 781
A+G+ +L + + IHRD+ + NIL+ EN + DFG+AR I P + T +
Sbjct: 209 ARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL-- 263
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA 841
+ ++ PE + KSDV+S+G++L EI + + + + S+ + M A
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRA 323
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
PE S + +Q+ L C R P ERP E+
Sbjct: 324 --PEYSTP--------EIYQIMLDCWHRDPKERPRFAEL 352
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 37/204 (18%)
Query: 632 VYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLF 690
V K A+K + A +K +L + +E+E + I +H+NI++L G +
Sbjct: 101 VTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153
Query: 691 YDYMVNGSLWDLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+Y G+L + L H P ++ L + + A A+G+ YL
Sbjct: 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---A 208
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEY 790
+ + IHRD+ + N+L+ E+ ++DFG+AR I H + T G ++ PE
Sbjct: 209 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEA 264
Query: 791 AHTSRLNEKSDVYSFGIVLLEILT 814
+SDV+SFG++L EI T
Sbjct: 265 LFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P N+++ E+ + H N+V +G+ LF +Y G L+D + +
Sbjct: 48 PENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP 104
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TA 771
D + + G+ YLH I HRD+K N+L+DE + +SDFG+A
Sbjct: 105 DAQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 772 MPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESN 824
+ GT+ Y+ PE + E DV+S GIVL +L G+ D S+
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P N+++ E+ + H N+V +G+ LF +Y G L+D + +
Sbjct: 49 PENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP 105
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TA 771
D + + G+ YLH I HRD+K N+L+DE + +SDFG+A
Sbjct: 106 DAQRFFHQLMA---GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 772 MPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESN 824
+ GT+ Y+ PE + E DV+S GIVL +L G+ D S+
Sbjct: 160 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + FG+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 618 LSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET---ELETIGSIR 670
+E+Y ++G G+ V KC + ++ K+ N+ ++ T E+E + +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 671 HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAY 730
H NI+ L + + G L+D + K+ + +I G+ Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGITY 136
Query: 731 LHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCIP--TAMPHASTFVLGTIGY 785
+H I+HRD+K NIL+ +++ D + DFG++ C T M +GT Y
Sbjct: 137 MH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----IGTAYY 189
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
I PE + +EK DV+S G++L +L+G
Sbjct: 190 IAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
KIAV + L +LH + +IHRDVK SN+LI+ + DFGI+ + ++ A T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV--AKTI 212
Query: 779 VLGTIGYIDPEYAHTSRLNE-----KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKA 833
G Y+ PE + LN+ KSD++S GI ++E+ + D+ Q +
Sbjct: 213 DAGCKPYMAPERIN-PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---- 267
Query: 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
V+E P++ V T Q C K+ ERPT E+ +
Sbjct: 268 --KQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELMQ 310
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 94
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI--PTAMPHASTFVLGTIGYIDPEY 790
IIHRD+K NIL++E+ ++DFG A+ + + A++FV GT Y+ PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPEL 205
Query: 791 AHTSRLNEKSDVYSFGIVLLEILTG 815
++ SD+++ G ++ +++ G
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 643 IAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGN---LLFYDYMVNGS 698
+AVK L P + ++ E++ + ++ H +I+ G G L +Y+ GS
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGS 104
Query: 699 LWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
L D L P + L L A +G+AYLH IHR++ + N+L+D +
Sbjct: 105 LRDYL--PRHSIGL--AQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVK 157
Query: 759 LSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ DFG+A+ +P + G + + PE + SDV+SFG+ L E+LT
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQ 215
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALK----NSRP--IAVKKLYNQY-PHNLREFETELETIGSIRHRNIVS 676
+G+GA VY+ + + P +AVK L Y + +F E I H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKS 746
NL F +NG DL++ K D A GL +LH + I++RD+K
Sbjct: 92 NLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKL 146
Query: 747 SNILIDENFDAHLSDFGIARCIPTAMPHAST-FVLGTIGYIDPEYAHTSRLNEKSDVYSF 805
NIL+D++ ++DFG+ C + A T GT YI PE + N D +SF
Sbjct: 147 DNILLDKDGHIKIADFGM--CKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSF 204
Query: 806 GIVLLEILTGKKAV---DNESNLHQLIMS 831
G++L E+L G+ D E H + M
Sbjct: 205 GVLLYEMLIGQSPFHGQDEEELFHSIRMD 233
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCA---LKNSRPIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA K +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + DF +AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 241
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ F+L +C + P RP+ E+
Sbjct: 242 -------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 281
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ F+L +C + P RP+ E+
Sbjct: 238 -------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 277
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ F+L +C + P RP+ E+
Sbjct: 244 -------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ F+L +C + P RP+ E+
Sbjct: 245 -------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYA--LSPYGNLLFYDYMVNGSL 699
+AVK L LR ++ E+E + ++ H +IV G L +Y+ GSL
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759
D L P V L L A +G+AYLH IHR + + N+L+D + +
Sbjct: 100 RDYL--PRHCVGL--AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKI 152
Query: 760 SDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+A+ +P + G + + PE + SDV+SFG+ L E+LT
Sbjct: 153 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 643 IAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYA--LSPYGNLLFYDYMVNGSL 699
+AVK L LR ++ E+E + ++ H +IV G L +Y+ GSL
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759
D L P V L L A +G+AYLH IHR + + N+L+D + +
Sbjct: 101 RDYL--PRHCVGL--AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKI 153
Query: 760 SDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
DFG+A+ +P + G + + PE + SDV+SFG+ L E+LT
Sbjct: 154 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 639 NSRPIAVKKLYNQYPHNL-REFETELETIGSIRHR-NIVSLHGYALSPYGNLL-FYDYMV 695
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++
Sbjct: 57 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 116
Query: 696 NGSLWDLLHG------PSK------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRD 743
G+L L P K K L E + + A+G+ +L + + IHRD
Sbjct: 117 FGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 173
Query: 744 VKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKS 800
+ + NIL+ E + DFG+AR I P + + + ++ PE +S
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQS 231
Query: 801 DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAVR 857
DV+SFG++L EI + + + + + + T M A D PE+
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM----------- 280
Query: 858 KTFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 281 --YQTMLDCWHGEPSQRPTFSEL 301
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 94
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 41/264 (15%)
Query: 638 KNSRPIAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696
+ ++ +A+K L ++ LRE F E ++H N+V L G + + Y +
Sbjct: 37 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 96
Query: 697 GSLWDLL--HGPSKKVKLDWETR-----------LKIAVGAAQGLAYL--HHDCNPRIIH 741
G L + L P V + R + + A G+ YL HH ++H
Sbjct: 97 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVH 151
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT----IGYIDPEYAHTSRLN 797
+D+ + N+L+ + + +SD G+ R + A + +LG I ++ PE + +
Sbjct: 152 KDLATRNVLVYDKLNVKISDLGLFREVYAADYYK---LLGNSLLPIRWMAPEAIMYGKFS 208
Query: 798 EKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
SD++S+G+VL E+ + G + SN V+E + + C D
Sbjct: 209 IDSDIWSYGVVLWEVFSYGLQPYCGYSN-----------QDVVEMIRNRQVLPCPD-DCP 256
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+ L + C +PS RP +++
Sbjct: 257 AWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 37/204 (18%)
Query: 632 VYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLF 690
V K A+K + A +K +L + +E+E + I +H+NI++L G +
Sbjct: 60 VTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 112
Query: 691 YDYMVNGSLWDLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+Y G+L + L H P ++ L + + A A+G+ YL
Sbjct: 113 VEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---A 167
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEY 790
+ + IHRD+ + N+L+ E+ ++DFG+AR I H + T G ++ PE
Sbjct: 168 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEA 223
Query: 791 AHTSRLNEKSDVYSFGIVLLEILT 814
+SDV+SFG++L EI T
Sbjct: 224 LFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700
+AVK L + +L + +E+E + I +H+NI++L G + +Y G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 701 DLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVK 745
+ L H P ++ L + + A A+G+ YL + + IHRD+
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 746 SSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEYAHTSRLNEKS 800
+ N+L+ E+ ++DFG+AR I H + T G ++ PE +S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 801 DVYSFGIVLLEILT 814
DV+SFG++L EI T
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 116
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 117 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 214
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 37/204 (18%)
Query: 632 VYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLF 690
V K A+K + A +K +L + +E+E + I +H+NI++L G +
Sbjct: 52 VTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 104
Query: 691 YDYMVNGSLWDLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+Y G+L + L H P ++ L + + A A+G+ YL
Sbjct: 105 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---A 159
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEY 790
+ + IHRD+ + N+L+ E+ ++DFG+AR I H + T G ++ PE
Sbjct: 160 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEA 215
Query: 791 AHTSRLNEKSDVYSFGIVLLEILT 814
+SDV+SFG++L EI T
Sbjct: 216 LFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700
+AVK L + +L + +E+E + I +H+NI++L G + +Y G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 701 DLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVK 745
+ L H P ++ L + + A A+G+ YL + + IHRD+
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 162
Query: 746 SSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEYAHTSRLNEKS 800
+ N+L+ E+ ++DFG+AR I H + T G ++ PE +S
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 801 DVYSFGIVLLEILT 814
DV+SFG++L EI T
Sbjct: 219 DVWSFGVLLWEIFT 232
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 41/264 (15%)
Query: 638 KNSRPIAVKKLYNQYPHNLRE-FETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696
+ ++ +A+K L ++ LRE F E ++H N+V L G + + Y +
Sbjct: 54 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113
Query: 697 GSLWDLL--HGPSKKVKLDWETR-----------LKIAVGAAQGLAYL--HHDCNPRIIH 741
G L + L P V + R + + A G+ YL HH ++H
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVH 168
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT----IGYIDPEYAHTSRLN 797
+D+ + N+L+ + + +SD G+ R + A + +LG I ++ PE + +
Sbjct: 169 KDLATRNVLVYDKLNVKISDLGLFREVYAADYYK---LLGNSLLPIRWMAPEAIMYGKFS 225
Query: 798 EKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856
SD++S+G+VL E+ + G + SN V+E + + C D
Sbjct: 226 IDSDIWSYGVVLWEVFSYGLQPYCGYSN-----------QDVVEMIRNRQVLPCPD-DCP 273
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+ L + C +PS RP +++
Sbjct: 274 AWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 28/240 (11%)
Query: 643 IAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVNGSLW 700
+ V K+ + R+F E + H N++ + G SP L +M GSL+
Sbjct: 38 VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLY 97
Query: 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760
++LH + V +D +K A+ A+G+A+L H P I + S +++IDE+ A +S
Sbjct: 98 NVLHEGTNFV-VDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARIS 155
Query: 761 --DFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKA 818
D + P M +A +V PE T+R +D++SF ++L E++T +
Sbjct: 156 MADVKFSFQSPGRM-YAPAWVAPEALQKKPE--DTNR--RSADMWSFAVLLWELVTREVP 210
Query: 819 VDNESNLHQLIMSKADDN---TVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP 875
+ SN+ ++ M A + T+ + P VS +L +C P++RP
Sbjct: 211 FADLSNM-EIGMKVALEGLRPTIPPGISPHVS-------------KLMKICMNEDPAKRP 256
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700
+AVK L + +L + +E+E + I +H+NI++L G + +Y G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 701 DLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVK 745
+ L H P ++ L + + A A+G+ YL + + IHRD+
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 746 SSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEYAHTSRLNEKS 800
+ N+L+ E+ ++DFG+AR I H + T G ++ PE +S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 801 DVYSFGIVLLEILT 814
DV+SFG++L EI T
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 653 PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKL 712
P +L++ E+ + + H NIV L + L +Y G ++D L + +
Sbjct: 55 PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK 114
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
+ ++ + V A Q Y H RI+HRD+K+ N+L+D + + ++DFG + T
Sbjct: 115 EARSKFRQIVSAVQ---YCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEF-TVG 167
Query: 773 PHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
F G Y PE + + + DV+S G++L +++G D + NL +L
Sbjct: 168 GKLDAFC-GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKEL 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + D G+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 113/280 (40%), Gaps = 49/280 (17%)
Query: 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLH 678
E G G V K A+K + A + +EL+ + + +H NIV+L
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETR----------LKIAVGAAQGL 728
G L+ +Y G DLL+ +K + D + L + AQG+
Sbjct: 117 GACTHGGPVLVITEYCCYG---DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT----IG 784
A+L + IHRDV + N+L+ A + DFG+AR I M ++ V G +
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSNYIVKGNARLPVK 227
Query: 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIMSKADDNTVME 840
++ PE +SDV+S+GI+L EI L + S ++L+ K
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV--KDGYQMAQP 285
Query: 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A P + + + C P+ RPT Q++
Sbjct: 286 AFAP------------KNIYSIMQACWALEPTHRPTFQQI 313
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700
+AVK L + +L + +E+E + I +H+NI++L G + +Y G+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 701 DLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVK 745
+ L H P ++ L + + A A+G+ YL + + IHRD+
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 170
Query: 746 SSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEYAHTSRLNEKS 800
+ N+L+ E+ ++DFG+AR I H + T G ++ PE +S
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 801 DVYSFGIVLLEILT 814
DV+SFG++L EI T
Sbjct: 227 DVWSFGVLLWEIFT 240
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 639 NSRPIAVKKLYNQYPHNL-REFETELETIGSIRHR-NIVSLHGYALSPYGNLL-FYDYMV 695
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++
Sbjct: 58 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 696 NGSLWDLLHG------PSKKVKLDW-------ETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L L P K+ D E + + A+G+ +L + + IHR
Sbjct: 118 FGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 174
Query: 743 DVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+ + NIL+ E + DFG+AR I P + + + ++ PE +
Sbjct: 175 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 232
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAV 856
SDV+SFG++L EI + + + + + + T M A D PE+
Sbjct: 233 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------- 282
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 283 ---YQTMLDCWHGEPSQRPTFSEL 303
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 643 IAVKKLY-NQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700
+AVK L + +L + +E+E + I +H+NI++L G + +Y G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 701 DLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVK 745
+ L H P ++ L + + A A+G+ YL + + IHRD+
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 746 SSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYS 804
+ N+L+ E+ ++DFG+AR I +T + ++ PE +SDV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 805 FGIVLLEILT 814
FG++L EI T
Sbjct: 238 FGVLLWEIFT 247
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESN 824
PE + E DV+S GIVL +L G+ D S+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 37/204 (18%)
Query: 632 VYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLF 690
V K A+K + A +K +L + +E+E + I +H+NI++L G +
Sbjct: 49 VTKVAVKMLKSDATEK-------DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 101
Query: 691 YDYMVNGSLWDLL---------------HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+Y G+L + L H P ++ L + + A A+G+ YL
Sbjct: 102 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKDLVSCAYQVARGMEYL---A 156
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG-----YIDPEY 790
+ + IHRD+ + N+L+ E+ ++DFG+AR I H + T G ++ PE
Sbjct: 157 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEA 212
Query: 791 AHTSRLNEKSDVYSFGIVLLEILT 814
+SDV+SFG++L EI T
Sbjct: 213 LFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + D G+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 669 IRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
+ H N+V +G+ LF +Y G L+D + + D + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-TAMPHASTFVLGTIGYID 787
YLH I HRD+K N+L+DE + +SDFG+A + GT+ Y+
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 788 PEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827
PE + E DV+S GIVL +L G+ D S+ Q
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLY-----NQYPHNLREFETE 662
F +M + L + VG G VYK R +A+K++ P E
Sbjct: 16 FQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---E 69
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK--- 719
+ + + H NIVSL S L +++M DL KKV + +T L+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK----DL-----KKVLDENKTGLQDSQ 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
I + Q L + H RI+HRD+K N+LI+ + L+DFG+AR + + T
Sbjct: 121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHE 179
Query: 780 LGTIGYIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGK 816
+ T+ Y P+ S+ S D++S G + E++TGK
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 639 NSRPIAVKKLYNQYPHNL-REFETELETIGSI-RHRNIVSLHGYALSPYGNLL-FYDYMV 695
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 696 NGSLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L L P K K L E + + A+G+ +L + + IHR
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 172
Query: 743 DVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+ + NIL+ E + DFG+AR I P + + + ++ PE +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQ 230
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAV 856
SDV+SFG++L EI + + + + + + T M A D PE+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------- 280
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 281 ---YQTMLDCWHGEPSQRPTFSEL 301
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 639 NSRPIAVKKLYNQYPHNL-REFETELETIGSIRHR-NIVSLHGYALSPYGNLL-FYDYMV 695
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++
Sbjct: 93 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 152
Query: 696 NGSLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L L P K K L E + + A+G+ +L + + IHR
Sbjct: 153 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 209
Query: 743 DVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+ + NIL+ E + DFG+AR I P + + + ++ PE +
Sbjct: 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 267
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAV 856
SDV+SFG++L EI + + + + + + T M A D PE+
Sbjct: 268 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------- 317
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 318 ---YQTMLDCWHGEPSQRPTFSEL 338
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVSLHGY 680
+G GA S V +C K K+ N + R+ E E ++H NIV LH
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 681 ALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740
+ L +D + G L++ + V ++ + + Q L ++H I+
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDI------VAREYYSEADASHCIHQILESVNHIHQHDIV 152
Query: 741 HRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTF-VLGTIGYIDPEYAHTSRL 796
HRD+K N+L+ L+DFG+A I + F GT GY+ PE
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 797 NEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMSKADD--NTVMEAVDPEVS 847
+ D+++ G++L +L G +++ L+Q I + A D + + V PE
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 265
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 99
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 155 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 23/211 (10%)
Query: 616 ENLSEKYIVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIG 667
E+ I+G G+ STV L SR A+K L N+ P+ RE + +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMS 87
Query: 668 SIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-A 725
+ H V L+ + L F Y NG L + +K+ ET +
Sbjct: 88 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 142
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIG 784
L YLH IIHRD+K NIL++E+ ++DFG A+ + P + + +GT
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y+ PE + SD+++ G ++ +++ G
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 40/262 (15%)
Query: 641 RPIAVKKLYNQYPHNL-REFETELETIGSIRHR-NIVSLHGYALSPYGNLL-FYDYMVNG 697
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 698 SLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDV 744
+L L P K K L E + + A+G+ +L + + IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 745 KSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
+ NIL+ E + DFG+AR I P + + + ++ PE +SD
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSD 223
Query: 802 VYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAVRK 858
V+SFG++L EI + + + + + + T M A D PE+
Sbjct: 224 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------ 271
Query: 859 TFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 272 -YQTMLDCWHGEPSQRPTFSEL 292
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLR 657
A+ I + TE L + ++G G TV+K P+ +K + ++ + +
Sbjct: 2 AMKVLARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 60
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWET 716
+ IGS+ H +IV L G L P +L L Y+ GSL D H + L +
Sbjct: 61 AVTDHMLAIGSLDHAHIVRLLG--LCPGSSLQLVTQYLPLGSLLD--HVRQHRGALGPQL 116
Query: 717 RLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776
L V A+G+ YL ++HR++ + N+L+ ++DFG+A +P P
Sbjct: 117 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP---PDDK 170
Query: 777 TFVLGT----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ I ++ E H + +SDV+S+G+ + E++T
Sbjct: 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 95
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 96 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI--PTAMPHASTFVLGTIGYIDPEY 790
IIHRD+K NIL++E+ ++DFG A+ + + A++FV GT Y+ PE
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPEL 206
Query: 791 AHTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTA-MPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
D+ + N+L+ EN ++DFG+AR I +T + ++ PE +SD
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSD 241
Query: 802 VYSFGIVLLEILT 814
V+SFG+++ EI T
Sbjct: 242 VWSFGVLMWEIFT 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 639 NSRPIAVKKLYNQYPHNL-REFETELETIGSI-RHRNIVSLHGYALSPYGNLL-FYDYMV 695
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 696 NGSLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L L P K K L E + + A+G+ +L + + IHR
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 172
Query: 743 DVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+ + NIL+ E + DFG+AR I P + + + ++ PE +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQ 230
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAV 856
SDV+SFG++L EI + + + + + + T M A D PE+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------- 280
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 281 ---YQTMLDCWHGEPSQRPTFSEL 301
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 95
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 96 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLY-----NQYPHNLREFETE 662
F +M + L + VG G VYK R +A+K++ P E
Sbjct: 16 FQGLMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---E 69
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK--- 719
+ + + H NIVSL S L +++M DL KKV + +T L+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK----DL-----KKVLDENKTGLQDSQ 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
I + Q L + H RI+HRD+K N+LI+ + L+DFG+AR + + T
Sbjct: 121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHE 179
Query: 780 LGTIGYIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGK 816
+ T+ Y P+ S+ S D++S G + E++TGK
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 94
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 23/211 (10%)
Query: 616 ENLSEKYIVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIG 667
E+ I+G G+ STV L SR A+K L N+ P+ RE + +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMS 90
Query: 668 SIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-A 725
+ H V L+ + L F Y NG L + +K+ ET +
Sbjct: 91 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIV 145
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIG 784
L YLH IIHRD+K NIL++E+ ++DFG A+ + P + + +GT
Sbjct: 146 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y+ PE + SD+++ G ++ +++ G
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 94
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKVVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G+++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 92
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 34/237 (14%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLH------------G 705
EF E + ++V L G L+ + M G L L
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765
P K+ +++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+
Sbjct: 124 PPSLSKM-----IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 175
Query: 766 RCI-PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNES 823
R I T L + ++ PE SDV+SFG+VL EI T ++ S
Sbjct: 176 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 235
Query: 824 NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
N L VME + C D+ F+L +C + P RP+ E+
Sbjct: 236 NEQVL-------RFVMEGGLLDKPDNCPDM-----LFELMRMCWQYNPKMRPSFLEI 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 94
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKS 746
NL F +NG DL++ K D A GL +LH + I++RD+K
Sbjct: 93 NLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKL 147
Query: 747 SNILIDENFDAHLSDFGIARCIPTAMPHAST-FVLGTIGYIDPEYAHTSRLNEKSDVYSF 805
NIL+D++ ++DFG+ C + A T GT YI PE + N D +SF
Sbjct: 148 DNILLDKDGHIKIADFGM--CKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSF 205
Query: 806 GIVLLEILTGKKAV---DNESNLHQLIMS 831
G++L E+L G+ D E H + M
Sbjct: 206 GVLLYEMLIGQSPFHGQDEEELFHSIRMD 234
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTA-MPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
D+ + N+L+ EN ++DFG+AR I +T + ++ PE +SD
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSD 241
Query: 802 VYSFGIVLLEILT 814
V+SFG+++ EI T
Sbjct: 242 VWSFGVLMWEIFT 254
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + +I+HRD+K N+LI++ L DFG+AR + S+ V+ T+ Y
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWY 174
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
P+ SR S D++S G +L E++TGK ++ QL + T E++ P
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234
Query: 845 EVS 847
V+
Sbjct: 235 SVT 237
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 92
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 40/262 (15%)
Query: 641 RPIAVKKLYNQYPHNL-REFETELETIGSIRHR-NIVSLHGYALSPYGNLL-FYDYMVNG 697
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 698 SLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDV 744
+L L P K K L E + + A+G+ +L + + IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 745 KSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
+ NIL+ E + DFG+AR I P + + + ++ PE +SD
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSD 223
Query: 802 VYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAVRK 858
V+SFG++L EI + + + + + + T M A D PE+
Sbjct: 224 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------ 271
Query: 859 TFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 272 -YQTMLDCWHGEPSQRPTFSEL 292
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 613 RSTENLSEKYIVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELE 664
+ E+ I+G G+ STV L SR A+K L N+ P+ RE +
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RD 61
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H V L+ + L F Y NG L + +K+ ET +
Sbjct: 62 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA 116
Query: 724 A-AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLG 781
L YLH IIHRD+K NIL++E+ ++DFG A+ + P + + +G
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
T Y+ PE + SD+++ G ++ +++ G
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 613 RSTENLSEKYIVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELE 664
+ E+ I+G G+ STV L SR A+K L N+ P+ RE +
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RD 62
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H V L+ + L F Y NG L + +K+ ET +
Sbjct: 63 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA 117
Query: 724 A-AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLG 781
L YLH IIHRD+K NIL++E+ ++DFG A+ + P + + +G
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
T Y+ PE + SD+++ G ++ +++ G
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 49/283 (17%)
Query: 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLH 678
E G G V K A+K + A + +EL+ + + +H NIV+L
Sbjct: 64 EATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLL-----------HGPSKKVKLDWETR--LKIAVGAA 725
G L+ +Y G L + L + PS + +R L + A
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVA 176
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--- 782
QG+A+L + IHRDV + N+L+ A + DFG+AR I M ++ V G
Sbjct: 177 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSNYIVKGNARL 230
Query: 783 -IGYIDPEYAHTSRLNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIMSKADDNT 837
+ ++ PE +SDV+S+GI+L EI L + S ++L+ K
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV--KDGYQM 288
Query: 838 VMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
A P + + + C P+ RPT Q++
Sbjct: 289 AQPAFAP------------KNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 613 RSTENLSEKYIVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELE 664
+ E+ I+G G+ STV L SR A+K L N+ P+ RE +
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RD 60
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H V L+ + L F Y NG L + +K+ ET +
Sbjct: 61 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA 115
Query: 724 A-AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLG 781
L YLH IIHRD+K NIL++E+ ++DFG A+ + P + + +G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
T Y+ PE + SD+++ G ++ +++ G
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 624 VGYGASSTVYKCALKNSRP---IAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
VG GA +V CA +++ +AVKKL + H R + EL + ++H N++ L
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 678 HGYALSPYGNLLFYD--YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
+P +L ++ Y+V + L+ K KL + + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA-HTS 794
+ IIHRD+K SN+ ++E+ + + D G+AR M T + T Y PE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM----TGYVATRWYRAPEIMLNWM 198
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
N+ D++S G ++ E+LTG+ ++ QL
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 613 RSTENLSEKYIVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELE 664
+ E+ I+G G+ STV L SR A+K L N+ P+ RE +
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RD 59
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H V L+ + L F Y NG L + +K+ ET +
Sbjct: 60 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTA 114
Query: 724 A-AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLG 781
L YLH IIHRD+K NIL++E+ ++DFG A+ + P + + +G
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
T Y+ PE + SD+++ G ++ +++ G
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
GL LH + RI++RD+K NIL+D++ +SD G+A +P +GT+GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYM 352
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG-------KKAVDNESNLHQLIMSKADDNTVM 839
PE R D ++ G +L E++ G KK + E + +L+ ++ +
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVKEVPEEYS-- 409
Query: 840 EAVDPEVSVTCVDL 853
E P+ C L
Sbjct: 410 ERFSPQARSLCSQL 423
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
GL LH + RI++RD+K NIL+D++ +SD G+A +P +GT+GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYM 352
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG-------KKAVDNESNLHQLIMSKADDNTVM 839
PE R D ++ G +L E++ G KK + E + +L+ ++ +
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVKEVPEEYS-- 409
Query: 840 EAVDPEVSVTCVDL 853
E P+ C L
Sbjct: 410 ERFSPQARSLCSQL 423
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 92
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + + RH NI+ ++
Sbjct: 37 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLAFRHENIIGINDIIR 93
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 94 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 150
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 151 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 210
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 211 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 76
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 77 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 132 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + R E E E+ + + H N+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH---T 133
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D+N L DFG+A I + + F GT ++ PE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + R E E E+ + + H N+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH---T 133
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D+N L DFG+A I + + F GT ++ PE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 240
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 91
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 92 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYA 791
IIHRD+K NIL++E+ ++DFG A+ + P + + +GT Y+ PE
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 639 NSRPIAVKKLYNQYPHNL-REFETELETIGSI-RHRNIVSLHGYALSPYGNLL-FYDYMV 695
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 696 NGSLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L L P K K L E + + A+G+ +L + + IHR
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 172
Query: 743 DVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+ + NIL+ E + DFG+AR I P + + + ++ PE +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 230
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAV 856
SDV+SFG++L EI + + + + + + T M A D PE+
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------- 280
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 281 ---YQTMLDCWHGEPSQRPTFSEL 301
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + R E E E+ + + H N+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH---T 133
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D+N L DFG+A I + + F GT ++ PE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
Query: 643 IAVKKLYNQYPHNLR---EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699
+AVK L Q +L + E++ + RH +I+ L+ +P + +Y+ G L
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759
+D + K +LD + ++ G+ Y H ++HRD+K N+L+D + +A +
Sbjct: 104 FDYI---CKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKI 157
Query: 760 SDFGIARCIPTAMPHASTFVLGTIG---YIDPEYAHTSRL--NEKSDVYSFGIVLLEILT 814
+DFG++ M F+ + G Y PE + RL + D++S G++L +L
Sbjct: 158 ADFGLSN-----MMSDGEFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLC 211
Query: 815 GKKAVDNE 822
G D++
Sbjct: 212 GTLPFDDD 219
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 623 IVGYGASSTVYKC-ALKNSRPIAVKKLY-------NQYPHNLREFETELETIGSIRHRNI 674
I+G G+ STV L SR A+K L N+ P+ RE + + + H
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRE----RDVMSRLDHPFF 91
Query: 675 VSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA-AQGLAYLH 732
V L+ + L F Y NG L + +K+ ET + L YLH
Sbjct: 92 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI--PTAMPHASTFVLGTIGYIDPEY 790
IIHRD+K NIL++E+ ++DFG A+ + + A++FV GT Y+ PE
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPEL 202
Query: 791 AHTSRLNEKSDVYSFGIVLLEILTG 815
+ SD+++ G ++ +++ G
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 639 NSRPIAVKKLYNQYPHNL-REFETELETIGSI-RHRNIVSLHGYALSPYGNLL-FYDYMV 695
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++
Sbjct: 47 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK 106
Query: 696 NGSLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L L P K K L E + + A+G+ +L + + IHR
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 163
Query: 743 DVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+ + NIL+ E + DFG+AR I P + + + ++ PE +
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQ 221
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAV 856
SDV+SFG++L EI + + + + + + T M A D PE+
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM---------- 271
Query: 857 RKTFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 272 ---YQTMLDCWHGEPSQRPTFSEL 292
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 617 NLSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET---ELETIGSI 669
+E+Y ++G G+ V KC + ++ K+ N+ ++ T E+E + +
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
H NI+ L + + G L+D + K+ + +I G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGIT 135
Query: 730 YLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
Y+H I+HRD+K NIL+ +++ D + DFG++ C +GT YI
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYI 190
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + +EK DV+S G++L +L+G
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSG 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + R E E E+ + + H N+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH---T 133
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D+N L DFG+A I + + F GT ++ PE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 617 NLSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET---ELETIGSI 669
+E+Y ++G G+ V KC + ++ K+ N+ ++ T E+E + +
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
H NI+ L + + G L+D + K+ + +I G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGIT 135
Query: 730 YLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
Y+H I+HRD+K NIL+ +++ D + DFG++ C +GT YI
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYI 190
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + +EK DV+S G++L +L+G
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSG 218
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 182 DLAARNVLVTENNVMRIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 240
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + R E E E+ + + H N+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH---T 133
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D+N L DFG+A I + + F GT ++ PE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + +T G + ++ PE +S
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKNT-TNGRLPVKWMAPEALFDRVYTHQS 240
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 173
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 174 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 232
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 233 DVWSFGVLMWEIFT 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 65 KEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 240
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 54 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 170
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 171 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 229
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 230 DVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 168
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 169 DLTARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 227
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 228 DVWSFGVLMWEIFT 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 43 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 99
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 100 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 156
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 157 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 216
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 217 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 245
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 35 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 91
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 148
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 149 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 39 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYXQRTLREIKILLRFRHENIIGINDIIR 95
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 152
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 153 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREF---ETELETIGSIRH 671
++N K +G GA S V +C K + K+ N + R+F E E ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 672 RNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYL 731
NIV LH + L +D + G L++ + + D ++ + + +AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYC 121
Query: 732 HHDCNPRIIHRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDP 788
H + I+HR++K N+L+ L+DFG+A I A GT GY+ P
Sbjct: 122 HSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 176
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILTG 815
E ++ D+++ G++L +L G
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 40/262 (15%)
Query: 641 RPIAVKKLYNQYPHNL-REFETELETIGSIRHR-NIVSLHGYALSPYGNLL-FYDYMVNG 697
R +AVK L H+ R +EL+ + I H N+V+L G P G L+ ++ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 698 SLWDLLHG------PSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDV 744
+L L P K K L E + + A+G+ +L + + IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 745 KSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
+ NIL+ E + DFG+AR I P + + + ++ PE +SD
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSD 223
Query: 802 VYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD---PEVSVTCVDLSAVRK 858
V+SFG++L EI + + + + + + T M A D PE+
Sbjct: 224 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------ 271
Query: 859 TFQLALLCTKRYPSERPTMQEV 880
+Q L C PS+RPT E+
Sbjct: 272 -YQTMLDCWHGEPSQRPTFSEL 292
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREF---ETELETIGSI 669
+ ++N K +G GA S V +C K + K+ N + R+F E E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H NIV LH + L +D + G L++ + + D ++ + + +A
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIA 119
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYI 786
Y H + I+HR++K N+L+ L+DFG+A I A GT GY+
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE ++ D+++ G++L +L G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREF---ETELETIGSI 669
+ ++N K +G GA S V +C K + K+ N + R+F E E +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H NIV LH + L +D + G L++ + + D ++ + + +A
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIA 118
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYI 786
Y H + I+HR++K N+L+ L+DFG+A I A GT GY+
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE ++ D+++ G++L +L G
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 24/232 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N ++ E+F + DFG+ R I
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ +L +C + P RP+ E+
Sbjct: 236 -------RFVMEGGLLDKPDNCPDM-----LLELMRMCWQYNPKMRPSFLEI 275
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 37 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 93
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 94 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 150
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 151 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 210
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 211 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + + RH NI+ ++
Sbjct: 37 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLAFRHENIIGINDIIR 93
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 94 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 150
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 151 DLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 210
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 211 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + +Y
Sbjct: 111 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 227
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + + G + ++ PE +S
Sbjct: 228 DLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 287 DVWSFGVLMWEIFT 300
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 611 IMRSTENLSEKY----IVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFET---E 662
+ ST S++Y ++G G+ V C K + AVK + + + E+ E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
++ + + H NI+ L+ + L + G L+D + + ++D +I
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 133
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLS--DFGIARCIPTAMPHASTFV 779
G+ Y+H + +I+HRD+K N+L++ ++ DA++ DFG++ +
Sbjct: 134 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 188
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
+GT YI PE H + +EK DV+S G++L +L+G
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
KI + + L +L N +IIHRD+K SNIL+D + + L DFGI+ + ++ A T
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI--AKTR 184
Query: 779 VLGTIGYIDPEYAHTSRLNE----KSDVYSFGIVLLEILTGK 816
G Y+ PE S + +SDV+S GI L E+ TG+
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 611 IMRSTENLSEKY----IVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFET---E 662
+ ST S++Y ++G G+ V C K + AVK + + + E+ E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
++ + + H NI+ L+ + L + G L+D + + ++D +I
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 157
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLS--DFGIARCIPTAMPHASTFV 779
G+ Y+H + +I+HRD+K N+L++ ++ DA++ DFG++ +
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 212
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
+GT YI PE H + +EK DV+S G++L +L+G
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 247
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 55 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 111
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 112 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 168
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 169 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 228
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 229 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 611 IMRSTENLSEKY----IVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFET---E 662
+ ST S++Y ++G G+ V C K + AVK + + + E+ E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
++ + + H NI+ L+ + L + G L+D + + ++D +I
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 156
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLS--DFGIARCIPTAMPHASTFV 779
G+ Y+H + +I+HRD+K N+L++ ++ DA++ DFG++ +
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 211
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
+GT YI PE H + +EK DV+S G++L +L+G
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 246
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G G+ S KC K S + AVK + + N ++ T L+ H NIV LH
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFH 76
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK-IAVGAAQGLAYLHHDCNPRIIH 741
L + + G L++ + KK K ET I ++++H + ++H
Sbjct: 77 DQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMH---DVGVVH 129
Query: 742 RDVKSSNILI---DENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
RD+K N+L ++N + + DFG AR P T T+ Y PE + + +E
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDE 188
Query: 799 KSDVYSFGIVLLEILTGK 816
D++S G++L +L+G+
Sbjct: 189 SCDLWSLGVILYTMLSGQ 206
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 35 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 91
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 148
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 149 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 35 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 91
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 148
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 149 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + R E E E+ + + H NI++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH---T 133
Query: 737 PRIIHRDVKSSNI-LIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D+N L DFG+A I + + F GT ++ PE +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIVN 191
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I + TE L + ++G G TV+K P+ +K + ++ + + +
Sbjct: 27 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 665 TIGSIRHRNIVSLHGYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
IGS+ H +IV L G L P +L L Y+ GSL D H + L + L V
Sbjct: 86 AIGSLDHAHIVRLLG--LCPGSSLQLVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQ 141
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT- 782
A+G+ YL ++HR++ + N+L+ ++DFG+A +P P +
Sbjct: 142 IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP---PDDKQLLYSEA 195
Query: 783 ---IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
I ++ E H + +SDV+S+G+ + E++T
Sbjct: 196 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 24 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 77
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 78 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 136
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 137 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TR 191
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 192 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 135 MLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF--MMTPYVVTR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 76 LMKXVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 135 MLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF--MMTPYVVTR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 15 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 68
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 69 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 127
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 128 MLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF--MMTPYVVTR 182
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 35 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 91
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 148
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 149 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 23 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 76
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 77 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 136 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 190
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 114/290 (39%), Gaps = 56/290 (19%)
Query: 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLH 678
E G G V K A+K + A + +EL+ + + +H NIV+L
Sbjct: 49 EATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLL 101
Query: 679 GYALSPYGNLLFYDYMVNGSLWDLLH-------GPS-----------KKVKLDWETR--L 718
G L+ +Y G L + L GPS K+ E R L
Sbjct: 102 GACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLL 161
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
+ AQG+A+L + IHRDV + N+L+ A + DFG+AR I M ++
Sbjct: 162 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSNYI 215
Query: 779 VLGT----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEI----LTGKKAVDNESNLHQLIM 830
V G + ++ PE +SDV+S+GI+L EI L + S ++L+
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV- 274
Query: 831 SKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
K A P + + + C P+ RPT Q++
Sbjct: 275 -KDGYQMAQPAFAP------------KNIYSIMQACWALEPTHRPTFQQI 311
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 641 RPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGS 698
R +AVK + P +L++ E+ + + H NIV L + L +Y G
Sbjct: 41 REVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGE 100
Query: 699 LWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758
++D L + + + + + V A Q Y H I+HRD+K+ N+L+D + +
Sbjct: 101 VFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKY---IVHRDLKAENLLLDGDMNIK 154
Query: 759 LSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKK 817
++DFG + T TF G+ Y PE + + + DV+S G++L +++G
Sbjct: 155 IADFGFSNEF-TVGNKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 818 AVDNESNLHQL 828
D + NL +L
Sbjct: 213 PFDGQ-NLKEL 222
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI+ L G + +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 240
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 33 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 89
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 90 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 146
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 147 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 206
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 207 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKVVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 55 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 111
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 112 APTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 168
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 169 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 228
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 229 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 35 AYGMVCSAYDNV--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 91
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 92 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 148
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 149 DLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 208
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 209 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I + H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 40 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 96
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 97 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 153
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 154 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 213
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 214 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 39 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 95
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 152
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 153 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 41 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 97
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 98 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 154
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 155 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 214
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 215 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 243
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 32 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 88
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 89 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 145
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 146 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 205
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 206 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 234
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 39 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 95
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 152
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 33 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 89
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 90 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 146
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 147 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 206
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 207 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I + H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 666 IGSIRHRNIVSLHGYALSPYGNLLFY-DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ +++H +V LH ++ L F DY+ G L+ H ++ L+ R A
Sbjct: 93 LKNVKHPFLVGLH-FSFQTADKLYFVLDYINGGELF--YHLQRERCFLEPRARF-YAAEI 148
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIG 784
A L YLH + I++RD+K NIL+D L+DFG+ + STF GT
Sbjct: 149 ASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC-GTPE 204
Query: 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y+ PE H + D + G VL E+L G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTV---YKCALKNSRPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V Y L+ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKVVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G+++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 282 LYLHGNKLTGPIPPELGNMSKLSYLQLQNN-QLVGTIPAELGKLEQLFELNLADNNLEGP 340
L+LH N L ++ L L L +N QL PA L +L L+L L+
Sbjct: 61 LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQEL 120
Query: 341 IPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGR-IINL 399
P AL + N L +FR+LG+LT+L L N VP R + +L
Sbjct: 121 GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSL 179
Query: 400 DTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFN 455
D L L N + P + DL L+TL L N+L+ L LR++Q + ++ N
Sbjct: 180 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
Query: 65 QSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN-QLT 123
Q I GN+++ C +L + L N L + + L LE L+L +N QL
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 124 GPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTG 183
P+T + L TL L R L P L LQYL L+ NAL + L
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 154
Query: 184 LWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFL-QVATLSLQGNKLT 242
L + + GN ++ + S + L + N++ P+ L ++ TL L N L+
Sbjct: 155 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
Query: 243 GKIPEVIGLMQALAVLDLSENELV 266
E + ++AL L L++N V
Sbjct: 215 ALPTEALAPLRALQYLRLNDNPWV 238
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 2/154 (1%)
Query: 208 FEILDISYN-QITGEIPYNI-GFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENEL 265
E LD+S N Q+ P G ++ TL L L P + + AL L L +N L
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141
Query: 266 VGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLE 325
+L L+LHGN+++ + L L L N++ P L
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201
Query: 326 QLFELNLADNNLEGPIPHNISSCTALNQFNVHGN 359
+L L L NNL ++ AL ++ N
Sbjct: 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 33.1 bits (74), Expect = 0.82, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 56/154 (36%), Gaps = 25/154 (16%)
Query: 255 LAVLDLSEN-ELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQL 313
L LDLS+N +L P L L+L L P ++ L YL LQ+N L
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141
Query: 314 VGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLG 373
L L L L N + +L++ +H NR++ P +FR+LG
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201
Query: 374 ------------------------SLTYLNLSRN 383
+L YL L+ N
Sbjct: 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 282 LYLHGNKLTGPIPPELGNMSKLSYLQLQNN-QLVGTIPAELGKLEQLFELNLADNNLEGP 340
L+LH N L ++ L L L +N QL PA L +L L+L L+
Sbjct: 60 LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQEL 119
Query: 341 IPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGR-IINL 399
P AL + N L +FR+LG+LT+L L N VP R + +L
Sbjct: 120 GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSL 178
Query: 400 DTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFN 455
D L L N + P + DL L+TL L N+L+ L LR++Q + ++ N
Sbjct: 179 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
Query: 65 QSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN-QLT 123
Q I GN+++ C +L + L N L + + L LE L+L +N QL
Sbjct: 34 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 93
Query: 124 GPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTG 183
P+T + L TL L R L P L LQYL L+ NAL + L
Sbjct: 94 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 153
Query: 184 LWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFL-QVATLSLQGNKLT 242
L + + GN ++ + S + L + N++ P+ L ++ TL L N L+
Sbjct: 154 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 213
Query: 243 GKIPEVIGLMQALAVLDLSENELV 266
E + ++AL L L++N V
Sbjct: 214 ALPTEALAPLRALQYLRLNDNPWV 237
Score = 35.0 bits (79), Expect = 0.21, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 2/154 (1%)
Query: 208 FEILDISYN-QITGEIPYNI-GFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENEL 265
E LD+S N Q+ P G ++ TL L L P + + AL L L +N L
Sbjct: 81 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 140
Query: 266 VGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLE 325
+L L+LHGN+++ + L L L N++ P L
Sbjct: 141 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 200
Query: 326 QLFELNLADNNLEGPIPHNISSCTALNQFNVHGN 359
+L L L NNL ++ AL ++ N
Sbjct: 201 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 33.1 bits (74), Expect = 0.83, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 56/154 (36%), Gaps = 25/154 (16%)
Query: 255 LAVLDLSEN-ELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQL 313
L LDLS+N +L P L L+L L P ++ L YL LQ+N L
Sbjct: 81 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 140
Query: 314 VGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLG 373
L L L L N + +L++ +H NR++ P +FR+LG
Sbjct: 141 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 200
Query: 374 ------------------------SLTYLNLSRN 383
+L YL L+ N
Sbjct: 201 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 47/295 (15%)
Query: 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSL 677
+SEK I+GYG+S TV RP+AVK++ + ++ E +L T S H N++
Sbjct: 18 VSEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLT-ESDDHPNVIR- 73
Query: 678 HGYALSPYGNLLFYDY--MVNGSLWDLLHGPS---KKVKLDWETR-LKIAVGAAQGLAYL 731
Y S + Y + N +L DL+ + + +KL E + + A G+A+L
Sbjct: 74 --YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 732 HHDCNPRIIHRDVKSSNILID-------------ENFDAHLSDFGIARCIPTAMPHASTF 778
H + +IIHRD+K NIL+ EN +SDFG+ + + + T
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 779 V---LGTIGYIDPEYAHTS-------RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
+ GT G+ PE S RL D++S G V IL+ K H
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK--------HPF 240
Query: 829 IMSKADDNTVMEAVDPEVSVTCV-DLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ ++ ++ + + C+ D S + + L P +RPT +V R
Sbjct: 241 GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 60 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 113
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 114 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 173 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 227
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 16/232 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQ-YPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA V++C K + + V K N YP + + E+ + + H +++LH
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
Y +L +++ G L+D + ++ K+ + A +GL ++H I+H
Sbjct: 119 DKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHL 173
Query: 743 DVKSSNILIDENFDAHLS--DFGIARCI-PTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+K NI+ + + + DFG+A + P + +T T + PE +
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFY 230
Query: 800 SDVYSFGIVLLEILTGKKAVDNESNLHQLI-MSKAD---DNTVMEAVDPEVS 847
+D+++ G++ +L+G E +L L + + D D +V PE
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 282
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKVVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
Y PE E D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 76 LMKXVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLD 713
+F E I H+NIV G +L + + M G L L PS+ L
Sbjct: 96 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 155
Query: 714 WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPT 770
L +A A G YL + IHRD+ + N L+ A + DFG+AR I
Sbjct: 156 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 212
Query: 771 AMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
A + + + ++ PE K+D +SFG++L EI +
Sbjct: 213 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 23 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 76
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 77 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 136 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 190
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 611 IMRSTENLSEKY----IVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFET---E 662
+ ST S++Y ++G G+ V C K + AVK + + + E+ E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
++ + + H NI+ L+ + L + G L+D + + ++D +I
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 139
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLS--DFGIARCIPTAMPHASTFV 779
G+ Y+H + +I+HRD+K N+L++ ++ DA++ DFG++ +
Sbjct: 140 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 194
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
+GT YI PE H + +EK DV+S G++L +L+G
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 229
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 240
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 23 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 76
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 77 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 136 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 190
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 15 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 68
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 69 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 127
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 128 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 182
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 16 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 70 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 129 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 183
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 39 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 95
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---SANVLHR 152
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H T + T Y PE S+ KS
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 212
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 76 LMKXVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 16 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 70 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 129 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 183
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIA 721
E++ + RH NI+ ++ +P + Y+V + L+ K L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 722 VGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--TFV 779
+GL Y+H + ++HRD+K SN+L++ D + DFG+AR H T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 780 LGTIGYIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQL 828
+ T Y PE S+ KS D++S G +L E+L+ + + L QL
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 21/194 (10%)
Query: 638 KNSRPIAVKKLYNQYPH-NLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695
K + +AVK L + +L + +E+E + I +H+NI++L G + Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 696 NGSLWDLLHG---PSKKVKLD----------WETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
G+L + L P + D ++ + A+G+ YL + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT--IGYIDPEYAHTSRLNEKS 800
D+ + N+L+ EN ++DFG+AR I + T G + ++ PE +S
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEALFDRVYTHQS 240
Query: 801 DVYSFGIVLLEILT 814
DV+SFG+++ EI T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 21 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 74
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 75 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 133
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 134 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 188
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 189 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 623 IVGYGASSTVYKCALKN----SRPIAVK--KLYNQYPHNLREFETELETIGSIRHRNIVS 676
I+G G +V + LK S +AVK KL N + EF +E + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 677 LHGYALS--------PYGNLLFYDY--MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
L G + P L F Y + L+ L K + L +T LK V A
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTLLKFMVDIAL 158
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT-IGY 785
G+ YL N +HRD+ + N ++ ++ ++DFG+++ I + + + + +
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
I E KSDV++FG+ + EI T
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 661 TELETIGSIRHRN-IVSLHGYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRL 718
TE + + IR +V+LH YA L L DY+ G L+ L S++ + E +
Sbjct: 107 TERQVLEHIRQSPFLVTLH-YAFQTETKLHLILDYINGGELFTHL---SQRERFT-EHEV 161
Query: 719 KIAVGA-AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777
+I VG L +LH II+RD+K NIL+D N L+DFG+++ +
Sbjct: 162 QIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 218
Query: 778 FVLGTIGYIDPEYAH--TSRLNEKSDVYSFGIVLLEILTGKK--AVDNESN 824
GTI Y+ P+ S ++ D +S G+++ E+LTG VD E N
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 269
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 60 VLKRYQNLKP---IGSGAQGIV--CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELV 113
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+SL +P L F D + L D +++LD E +
Sbjct: 114 LMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ T + T
Sbjct: 173 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTR 227
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLD 713
+F E I H+NIV G +L + + M G L L PS+ L
Sbjct: 86 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 145
Query: 714 WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPT 770
L +A A G YL + IHRD+ + N L+ A + DFG+AR I
Sbjct: 146 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 202
Query: 771 AMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
A + + + ++ PE K+D +SFG++L EI +
Sbjct: 203 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPAFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTA-MPHASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + ++ P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLD 713
+F E I H+NIV G +L + + M G L L PS+ L
Sbjct: 106 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 165
Query: 714 WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPT 770
L +A A G YL + IHRD+ + N L+ A + DFG+AR I
Sbjct: 166 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 222
Query: 771 AMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
A + + + ++ PE K+D +SFG++L EI +
Sbjct: 223 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+AR I A + + + ++ P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 643 IAVKKLYNQYPHNLR---EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699
+AVK L Q +L + + E++ + RH +I+ L+ +P + +Y+ G L
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 700 WDLL--HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDA 757
+D + HG ++++ RL + +A + H ++HRD+K N+L+D + +A
Sbjct: 99 FDYICKHGRVEEME---ARRLFQQILSAVDYCHRH-----MVVHRDLKPENVLLDAHMNA 150
Query: 758 HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL--NEKSDVYSFGIVLLEILTG 815
++DFG++ + ++ G+ Y PE + RL + D++S G++L +L G
Sbjct: 151 KIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCG 207
Query: 816 KKAVDNE 822
D+E
Sbjct: 208 TLPFDDE 214
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 39 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 95
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 96 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 152
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF--VLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H + T Y PE S+ KS
Sbjct: 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKS 212
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 213 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+GL +LH +C I+HRD+K NIL+ L+DFG+AR M A T V+ T+ Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALTPVVVTLWY 185
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
PE S D++S G + E+ K S QL
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYAL 682
YG + Y N +A+KK+ + + H T E++ + RH NI+ ++
Sbjct: 40 AYGMVCSAYDNL--NKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 96
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
+P + Y+V + L+ K L + +GL Y+H + ++HR
Sbjct: 97 APTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHR 153
Query: 743 DVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF--VLGTIGYIDPEYAHTSRLNEKS 800
D+K SN+L++ D + DFG+AR H + T Y PE S+ KS
Sbjct: 154 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKS 213
Query: 801 -DVYSFGIVLLEILTGKKAVDNESNLHQL 828
D++S G +L E+L+ + + L QL
Sbjct: 214 IDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 24/232 (10%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M G L L +++ +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+++A A G+AYL+ + + +HRD+ + N + E+F + DFG+ R I
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828
T L + ++ PE SDV+SFG+VL EI T ++ SN L
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VME + C D+ +L +C + P RP+ E+
Sbjct: 238 -------RFVMEGGLLDKPDNCPDM-----LLELMRMCWQYNPKMRPSFLEI 277
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+GL +LH + R++HRD+K NIL+ + L+DFG+AR M A T V+ T+ Y
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWY 185
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
PE S D++S G + E+ K S++ QL
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 616 ENLSEKYIVGYGA-----SSTVYKCALKN-SRPIAVKKLYNQYPHNLRE-FETELETIGS 668
ENL ++G GA ++T Y + S +AVK L + + RE +EL+ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 669 I-RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-------------- 713
+ H NIV+L G L ++Y G L + L +K D
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 714 ------WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767
+E L A A+G+ +L +HRD+ + N+L+ + DFG+AR
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 768 IPTAMPHASTFVLGT----IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
I M ++ V G + ++ PE KSDV+S+GI+L EI +
Sbjct: 222 I---MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
KIAV + L +LH + +IHRDVK SN+LI+ + DFGI+ + + A
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV--AKDI 168
Query: 779 VLGTIGYIDPEYAHTSRLNE-----KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKA 833
G Y+ PE + LN+ KSD++S GI ++E+ + D+ Q +
Sbjct: 169 DAGCKPYMAPERIN-PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---- 223
Query: 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
V+E P++ V T Q C K+ ERPT E+ +
Sbjct: 224 --KQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELMQ 266
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 611 IMRSTENLSEKY----IVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFET---E 662
+ ST S++Y ++G G+ V C K + AVK + + + E+ E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 663 LETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722
++ + + H NI L+ + L + G L+D + + ++D +I
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 133
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLS--DFGIARCIPTAMPHASTFV 779
G+ Y H + +I+HRD+K N+L++ ++ DA++ DFG++ +
Sbjct: 134 QVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK-- 188
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
+GT YI PE H + +EK DV+S G++L +L+G
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 643 IAVKKLYNQYPHNLR---EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699
+AVK L Q +L + + E++ + RH +I+ L+ +P + +Y+ G L
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 700 WDLL--HGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDA 757
+D + HG ++++ RL + +A + H ++HRD+K N+L+D + +A
Sbjct: 99 FDYICKHGRVEEME---ARRLFQQILSAVDYCHRH-----MVVHRDLKPENVLLDAHMNA 150
Query: 758 HLSDFGIARCIPTAMPHASTFVLGTIG---YIDPEYAHTSRL--NEKSDVYSFGIVLLEI 812
++DFG++ M F+ + G Y PE + RL + D++S G++L +
Sbjct: 151 KIADFGLSN-----MMSDGEFLRDSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYAL 204
Query: 813 LTGKKAVDNE 822
L G D+E
Sbjct: 205 LCGTLPFDDE 214
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 43/291 (14%)
Query: 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSL 677
+SEK I+GYG+S TV RP+AVK++ + ++ E +L T S H N++
Sbjct: 36 VSEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLT-ESDDHPNVIR- 91
Query: 678 HGYALSPYGNLLFYDY--MVNGSLWDLLHGPS---KKVKLDWETR-LKIAVGAAQGLAYL 731
Y S + Y + N +L DL+ + + +KL E + + A G+A+L
Sbjct: 92 --YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 732 HHDCNPRIIHRDVKSSNILID-------------ENFDAHLSDFGIARCIPTAMPHASTF 778
H + +IIHRD+K NIL+ EN +SDFG+ + + +
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 779 V---LGTIGYIDPEYAHTS---RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
+ GT G+ PE S RL D++S G V IL+ K H
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK--------HPFGDKY 258
Query: 833 ADDNTVMEAVDPEVSVTCV-DLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ ++ ++ + + C+ D S + + L P +RPT +V R
Sbjct: 259 SRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+GL +LH + R++HRD+K NIL+ + L+DFG+AR M A T V+ T+ Y
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWY 185
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
PE S D++S G + E+ K S++ QL
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+GL +LH + R++HRD+K NIL+ + L+DFG+AR M A T V+ T+ Y
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWY 185
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
PE S D++S G + E+ K S++ QL
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 300 MSKLSYLQLQNNQLVGTIP-AELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNV-H 357
++ L+ L+L +N+L TIP L +L EL L +N +E + + +L + ++
Sbjct: 111 LANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGE 169
Query: 358 GNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASI 417
RLS +F L +L YLNL+ N + ++P L +I LD LDLS N+ S P S
Sbjct: 170 LKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSF 227
Query: 418 GDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLS 458
L HL L + ++ + + F NL+S+ I+++ N L+
Sbjct: 228 QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 113/297 (38%), Gaps = 55/297 (18%)
Query: 51 GGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLK 110
+ PS+ N S K ++PD I L + L +N + S L+
Sbjct: 31 SAQTCPSVCSCSNQFSKVICVRKNLREVPDGISTNTRL--LNLHENQIQIIKVNSFKHLR 88
Query: 111 QLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPR--LIYWNEVLQYLGLRGN 168
LE L L N + + NL TL+L N+LT IP +Y ++ L+ L LR N
Sbjct: 89 HLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSK-LKELWLRNN 146
Query: 169 ALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGF 228
+ + S ++ L D+ I + +FE L N+ +
Sbjct: 147 PIESIPSYAFNRIPSLRRLDLGELKRLSYISEG-----AFEGLS------------NLRY 189
Query: 229 LQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNK 288
L +A +L+ +IP + L++ L LDLS GN
Sbjct: 190 LNLAMCNLR------EIPNLTPLIK-LDELDLS------------------------GNH 218
Query: 289 LTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNI 345
L+ P + L L + +Q+ L+ L E+NLA NNL +PH++
Sbjct: 219 LSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNSR-PIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 187 FDVRGNNLTGTI-PDSIGNCTSFEILDISYNQITGEIPYNIGFL-QVATLSLQGNKLT-- 242
F V G + + P I + F LD S N +T + N G L ++ TL LQ N+L
Sbjct: 307 FTVSGTRMVHMLCPSKI---SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKEL 363
Query: 243 GKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLY---LHGNKLTGPI----PP 295
KI E+ M++L LD+S+N + G+ S+T L + N LT I PP
Sbjct: 364 SKIAEMTTQMKSLQQLDISQNSV--SYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPP 421
Query: 296 ELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNI-SSCTALNQF 354
++ L L +N+ + +IP ++ KLE L ELN+A N L+ +P I T+L +
Sbjct: 422 ------RIKVLDLHSNK-IKSIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKI 473
Query: 355 NVHGNRLSGAIP 366
+H N + P
Sbjct: 474 WLHTNPWDCSCP 485
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 72/180 (40%), Gaps = 8/180 (4%)
Query: 286 GNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLE--GPIPH 343
G ++ + P +S +L NN L T+ G L +L L L N L+ I
Sbjct: 311 GTRMVHMLCP--SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAE 368
Query: 344 NISSCTALNQFNVHGNRLS-GAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTL 402
+ +L Q ++ N +S SL LN+S N + L I + L
Sbjct: 369 MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKV--L 426
Query: 403 DLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIP 462
DL N S+P + LE L LN++ N L + F L S+Q I + N S P
Sbjct: 427 DLHSNKI-KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 63 NLQSIDFQGNKLTGQI-PDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQ 121
N+++ G ++ + P +I +H++ S+N L + + L +LE L L+ NQ
Sbjct: 303 NIKNFTVSGTRMVHMLCPSKIS---PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ 359
Query: 122 LT--GPIPSTLTQIPNLKTLDLARNQLT-GEIPRLIYWNEVLQYLGLRGNALTGMLSPDM 178
L I TQ+ +L+ LD+++N ++ E W + L L + N LT +
Sbjct: 360 LKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF--R 417
Query: 179 CQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITG 220
C + D+ N + +IP + + + L+++ NQ+
Sbjct: 418 CLPPRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKS 458
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Query: 317 IPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLT 376
+P +L + + LN++ N + +I S + L + NR+ S F+ L
Sbjct: 15 VPKDLSQKTTI--LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72
Query: 377 YLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSG-SVPASIGDLEHLLTLNLSRNHL-- 433
YL+LS N V +NL LDLS N F + G++ L L LS HL
Sbjct: 73 YLDLSHNKL---VKISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129
Query: 434 NGLLPAEFGNLRSI 447
+ +LP N+ +
Sbjct: 130 SSVLPIAHLNISKV 143
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 29/191 (15%)
Query: 107 SKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLT--GEIPRLIYWNEVLQYLG 164
SK+ L+ NN LT + + L+TL L NQL +I + + LQ L
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 165 LRGNALTGMLSPDMCQLT-GLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIP 223
+ N+++ C T L ++ N LT D+I C +P
Sbjct: 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT----DTIFRC----------------LP 420
Query: 224 YNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLY 283
++ L L NK+ IP+ + ++AL L+++ N+L I L+ K++
Sbjct: 421 P-----RIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIW 474
Query: 284 LHGNKLTGPIP 294
LH N P
Sbjct: 475 LHTNPWDCSCP 485
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 190 RGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFL-QVATLSLQGNKLTGKIPEV 248
R N +P + T+ IL+IS N I+ +I L ++ L + N++ V
Sbjct: 7 RSKNGLIHVPKDLSQKTT--ILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISV 64
Query: 249 IGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTG-PIPPELGNMSKLSYLQ 307
Q L LDLS N+LV NL + L L N PI E GNMS+L +L
Sbjct: 65 FKFNQELEYLDLSHNKLVKISCHPTVNLKH---LDLSFNAFDALPICKEFGNMSQLKFLG 121
Query: 308 LQNNQL 313
L L
Sbjct: 122 LSTTHL 127
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 16 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 70 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 129 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 183
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 43/291 (14%)
Query: 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSL 677
+SEK I+GYG+S TV RP+AVK++ + ++ E +L T S H N++
Sbjct: 36 VSEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLT-ESDDHPNVIR- 91
Query: 678 HGYALSPYGNLLFYDY--MVNGSLWDLLHGPS---KKVKLDWETR-LKIAVGAAQGLAYL 731
Y S + Y + N +L DL+ + + +KL E + + A G+A+L
Sbjct: 92 --YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 732 HHDCNPRIIHRDVKSSNILID-------------ENFDAHLSDFGIARCIPTAMPHASTF 778
H + +IIHRD+K NIL+ EN +SDFG+ + + +
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 779 V---LGTIGYIDPEYAHTS---RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
+ GT G+ PE S RL D++S G V IL+ K H
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK--------HPFGDKY 258
Query: 833 ADDNTVMEAVDPEVSVTCV-DLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ ++ ++ + + C+ D S + + L P +RPT +V R
Sbjct: 259 SRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 282 LYLHGNKLTGPIPPELGNMSKLSYLQLQNN-QLVGTIPAELGKLEQLFELNLADNNLEGP 340
L+LH N L G ++ L L L +N QL P L L L+L L+
Sbjct: 60 LWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQEL 119
Query: 341 IPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGR-IINL 399
P AL + N L ++FR+LG+LT+L L N VP R + +L
Sbjct: 120 GPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIP-SVPEHAFRGLHSL 178
Query: 400 DTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAE-FGNLRSIQTIDMSFN 455
D L L N+ + P + DL L+TL L N+L+ +LPAE LRS+Q + ++ N
Sbjct: 179 DRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLNDN 234
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 281 KLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADN-NLEG 339
+++LHGN+++ + L+ L L +N L G A L L +L+L+DN L
Sbjct: 35 RIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRV 94
Query: 340 PIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINL 399
P L+ ++ L P FR L +L YL L NN + + NL
Sbjct: 95 VDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNL 154
Query: 400 DTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSG 459
L L N + L L L L +NH+ + P F +L + T+ + N LS
Sbjct: 155 THLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS- 213
Query: 460 SIPAE 464
+PAE
Sbjct: 214 MLPAE 218
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 65 QSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN-QLT 123
Q I GN+++ +C +L + L N+L G + + L LE L+L +N QL
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 124 GPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTG 183
P+T + +L TL L R L P L LQYL L+ N L + L
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGN 153
Query: 184 LWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFL-QVATLSLQGNKLT 242
L + + GN + + S + L + N + P+ L ++ TL L N L+
Sbjct: 154 LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
Query: 243 GKIPEVIGLMQALAVLDLSENELV 266
EV+ +++L L L++N V
Sbjct: 214 MLPAEVLVPLRSLQYLRLNDNPWV 237
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 2/164 (1%)
Query: 231 VATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPI-PPILGNLSYTGKLYLHGNKL 289
+ L L N L G + L LDLS+N + + P L + L+L L
Sbjct: 57 LTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGL 116
Query: 290 TGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCT 349
P ++ L YL LQ+N L L L L L N + H
Sbjct: 117 QELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLH 176
Query: 350 ALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTEL 393
+L++ +H N ++ P +FR+LG L L L NN +P E+
Sbjct: 177 SLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEV 219
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 60/160 (37%), Gaps = 5/160 (3%)
Query: 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYN-QITGEIPYNI-GFLQVATLSLQG 238
LT LW + N L G + T E LD+S N Q+ P G + TL L
Sbjct: 57 LTILW---LHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDR 113
Query: 239 NKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELG 298
L P + + AL L L +N L +L L+LHGN++
Sbjct: 114 CGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFR 173
Query: 299 NMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLE 338
+ L L L N + P L +L L L NNL
Sbjct: 174 GLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
+L++ E+ + + H NIV L + L +Y G ++D L + + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774
+ + V A Q Y H I+HRD+K+ N+L+D + + ++DFG + T
Sbjct: 116 RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNK 168
Query: 775 ASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
TF G+ Y PE + + + DV+S G++L +++G D + NL +L
Sbjct: 169 LDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKEL 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI---------PTAMPHASTFVLGTIGYIDPE 789
+IHRD+K SN+LI+ N D + DFG+AR I PT T + T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 790 YAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM 830
TS + + DV+S G +L E+ + HQL++
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI---------PTAMPHASTFVLGTIGYIDPE 789
+IHRD+K SN+LI+ N D + DFG+AR I PT T + T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 790 YAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM 830
TS + + DV+S G +L E+ + HQL++
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 23/226 (10%)
Query: 623 IVGYGASSTVYKCALKNSRPI----AVKKLYNQYPHNLREFETELETIGSI-RHRNIVSL 677
++G G+ + V LK + I VKK ++ +TE H +V L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 678 HGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNP 737
H L F VNG DL+ ++ KL E + + L YLH
Sbjct: 119 HS-CFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG-- 173
Query: 738 RIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLN 797
II+RD+K N+L+D L+D+G+ + STF GT YI PE
Sbjct: 174 -IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC-GTPNYIAPEILRGEDYG 231
Query: 798 EKSDVYSFGIVLLEILTGKKAVD-----------NESNLHQLIMSK 832
D ++ G+++ E++ G+ D E L Q+I+ K
Sbjct: 232 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 277
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 27 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 80
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 81 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 139
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 140 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TR 194
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 22/230 (9%)
Query: 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPI-AVKKLYNQYPHNL-----REFETEL 663
D+ + + +G G +TVYK KN+ I A+KK+ + R E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 664 ETIGSIRHRNIVSLHGYALSPYGNL----LFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
+ + + H NI+ L L +G+ L +D+M L ++ S + L
Sbjct: 64 KLLQELSHPNIIGL----LDAFGHKSNISLVFDFM-ETDLEVIIKDNS--LVLTPSHIKA 116
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ QGL YLH I+HRD+K +N+L+DEN L+DFG+A+ + A
Sbjct: 117 YMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQ 172
Query: 780 LGTIGYIDPEYAHTSRL-NEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
+ T Y PE +R+ D+++ G +L E+L + +S+L QL
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
+L++ E+ + + H NIV L + L +Y G ++D L + + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774
+ + V A Q Y H I+HRD+K+ N+L+D + + ++DFG + T
Sbjct: 116 RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNK 168
Query: 775 ASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
TF G+ Y PE + + + DV+S G++L +++G D + NL +L
Sbjct: 169 LDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKEL 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 130
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 186
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 129
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 185
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
+L++ E+ + + H NIV L + L +Y G ++D L + + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774
+ + V A Q Y H I+HRD+K+ N+L+D + + ++DFG + T
Sbjct: 116 RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNK 168
Query: 775 ASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
TF G+ Y PE + + + DV+S G++L +++G D + NL +L
Sbjct: 169 LDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKEL 221
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 131
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 189
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 190 YEPLGLEADMWSIGVITYILLSG 212
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 128
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 184
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCALKNS---RPIAVKKL---YNQYPHNLREFETELE 664
+++ +NL +G GA V CA ++ R +A+KKL + H R + EL
Sbjct: 22 VLKRYQNLKP---IGSGAQGIV--CAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELV 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLL-FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVG 723
+ + H+NI+ L +P +L F D + L D +++LD E +
Sbjct: 76 LMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 724 AAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
G+ +LH + IIHRD+K SNI++ + + DFG+AR T+ V T
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TR 189
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
Y PE E D++S G ++ E++ K
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 126
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 182
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 131
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 189
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 190 YEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 127
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 183
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E E+ + I+H NIV+L SP L + G L+D + + D T ++
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCIPTAMPHAS 776
+ A + YLH I+HRD+K N+L DE +SDFG+++
Sbjct: 128 QVLDA---VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVM 179
Query: 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMSKAD 834
+ GT GY+ PE ++ D +S G++ +L G +N+S L + I+ KA+
Sbjct: 180 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL-KAE 238
Query: 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
D D+S K F L+ ++ P++R T ++ AR
Sbjct: 239 YEFDSPYWD--------DISDSAKDFIRNLM--EKDPNKRYTCEQAAR 276
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVR--EHKDNIGSQYLLNWCVQI 127
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 183
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 639 NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGS 698
N+ I++K Y+ +F+ EL+ I I++ ++ G + + Y+YM N S
Sbjct: 77 NNDKISIKSKYD-------DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS 129
Query: 699 LWDLLHGPSKKVKLDWETRLKIAVGAAQ--------GLAYLHHDCNPRIIHRDVKSSNIL 750
+ L LD I + + +Y+H++ N I HRDVK SNIL
Sbjct: 130 I---LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNIL 184
Query: 751 IDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE-YAHTSRLN-EKSDVYSFGIV 808
+D+N LSDFG + + S GT ++ PE +++ S N K D++S GI
Sbjct: 185 MDKNGRVKLSDFGESEYMVDKKIKGSR---GTYEFMPPEFFSNESSYNGAKVDIWSLGIC 241
Query: 809 L 809
L
Sbjct: 242 L 242
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 600 HMDMAIHTFDDIMRSTENLSEKYI----VGYGASSTVYKCALKNSR---PIAVKKL---Y 649
HMD ++ + ST + ++Y +G GA V CA ++ +AVKKL +
Sbjct: 3 HMDSQFYSVQ-VADSTFTVLKRYQQLKPIGSGAQGIV--CAAFDTVLGINVAVKKLSRPF 59
Query: 650 NQYPHNLREFETELETIGSIRHRNIVSLHGY-----ALSPYGNLLFYDYMVNGSLWDLLH 704
H R + EL + + H+NI+SL L + ++ +++ +L ++H
Sbjct: 60 QNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH 118
Query: 705 GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764
++LD E + G+ +LH + IIHRD+K SNI++ + + DFG+
Sbjct: 119 -----MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 170
Query: 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
AR T V T Y PE E D++S G ++ E++ G
Sbjct: 171 ARTASTNFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 624 VGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLRE-----FETELETIGSIRHRNIVS 676
+G+GA VY+ + + P ++ P E F E I H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLH 732
G +L + + M G L L PS+ L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 733 HDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDP 788
+ IHRD+ + N L+ A + DFG+A+ I A + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 789 EYAHTSRLNEKSDVYSFGIVLLEILT 814
E K+D +SFG++L EI +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+GL +LH +C I+HRD+K NIL+ L+DFG+AR M A V T+ Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWY 177
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
PE S D++S G + E+ K S QL
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 126/295 (42%), Gaps = 47/295 (15%)
Query: 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSL 677
+SEK I+GYG+S TV RP+AVK++ + ++ E +L T S H N++
Sbjct: 18 VSEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLT-ESDDHPNVIR- 73
Query: 678 HGYALSPYGNLLFYDY--MVNGSLWDLLHGPS---KKVKLDWETR-LKIAVGAAQGLAYL 731
Y S + Y + N +L DL+ + + +KL E + + A G+A+L
Sbjct: 74 --YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 732 HHDCNPRIIHRDVKSSNILID-------------ENFDAHLSDFGIARCIPTAMPHASTF 778
H + +IIHRD+K NIL+ EN +SDFG+ + + +
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 779 V---LGTIGYIDPEYAHTS-------RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
+ GT G+ PE S RL D++S G V IL+ K H
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK--------HPF 240
Query: 829 IMSKADDNTVMEAVDPEVSVTCV-DLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ ++ ++ + + C+ D S + + L P +RPT +V R
Sbjct: 241 GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 151
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 152 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 207
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVSLHGY 680
+G GA S V +C + K+ N + R+ E E ++H NIV LH
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 681 ALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740
+ L +D + G L++ + V ++ + + Q L + H ++
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI------VAREYYSEADASHCIQQILEAVLHCHQMGVV 125
Query: 741 HRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTF-VLGTIGYIDPEYAHTSRL 796
HRD+K N+L+ L+DFG+A I + F GT GY+ PE
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMSKADD--NTVMEAVDPEVS 847
+ D+++ G++L +L G +++ L+Q I + A D + + V PE
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLR------EFETELETIGSIRHRNIVS 676
+G G + V KC K++ A K + + + R + E E+ + I+H N+++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
LH + +L + + G L+D L ++K L E + G+ YLH +
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 737 PRIIHRDVKSSNI-LIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+I H D+K NI L+D N + DFG+A I + F GT ++ PE +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVN 190
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
L ++D++S G++ +L+G
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 123
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 124 AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 179
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 133
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 189
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 126
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 182
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 129
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 185
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 129
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 185
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 25/227 (11%)
Query: 623 IVGYGASSTVYKCALKNSRPI----AVKKLYNQYPHNLREFETELETI-GSIRHRNIVSL 677
++G G+ + V LK + I VKK ++ +TE + H +V L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 678 HGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNP 737
H L F VNG DL+ ++ KL E + + L YLH
Sbjct: 72 HS-CFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG-- 126
Query: 738 RIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYIDPEYAHTSRL 796
II+RD+K N+L+D L+D+G+ C P +T GT YI PE
Sbjct: 127 -IIYRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAVD-----------NESNLHQLIMSK 832
D ++ G+++ E++ G+ D E L Q+I+ K
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 230
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPHNLR 657
+++ D+ S E ++ +G G+ VY+ ++ +AVK + R
Sbjct: 5 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 658 -EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD--- 713
EF E + ++V L G L+ + M +G L L + + +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 714 ----WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI- 768
+ +++A A G+AYL+ + +HRD+ + N ++ +F + DFG+ R I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
T L + ++ PE SD++SFG+VL EI +
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLI-TQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 126
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 182
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 129
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 185
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 128
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 184
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 25/227 (11%)
Query: 623 IVGYGASSTVYKCALKNSRPI----AVKKLYNQYPHNLREFETELETIGSI-RHRNIVSL 677
++G G+ + V LK + I VKK ++ +TE H +V L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 678 HGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNP 737
H L F VNG DL+ ++ KL E + + L YLH
Sbjct: 76 HS-CFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG-- 130
Query: 738 RIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYIDPEYAHTSRL 796
II+RD+K N+L+D L+D+G+ C P +T GT YI PE
Sbjct: 131 -IIYRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 797 NEKSDVYSFGIVLLEILTGKKAVD-----------NESNLHQLIMSK 832
D ++ G+++ E++ G+ D E L Q+I+ K
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 25/227 (11%)
Query: 623 IVGYGASSTVYKCALKNSRPI----AVKKLYNQYPHNLREFETELETIGSI-RHRNIVSL 677
++G G+ + V LK + I VKK ++ +TE H +V L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 678 HGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNP 737
H L F VNG DL+ ++ KL E + + L YLH
Sbjct: 87 HS-CFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG-- 141
Query: 738 RIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYIDPEYAHTSRL 796
II+RD+K N+L+D L+D+G+ C P +T GT YI PE
Sbjct: 142 -IIYRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 797 NEKSDVYSFGIVLLEILTGKKAVD-----------NESNLHQLIMSK 832
D ++ G+++ E++ G+ D E L Q+I+ K
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 245
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYA 681
+G G VYK A+KK+ + T E+ + ++H NIV L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 682 LSPYGNLLFYDYMVN--GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739
+ +L ++++ L D+ G + V T + G+AY H + R+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCH---DRRV 121
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
+HRD+K N+LI+ + ++DFG+AR + T + T+ Y P+ S+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 800 S-DVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ D++S G + E++ G S QL+
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPHNLR-EFET 661
D+ S E ++ +G G+ VY+ ++ +AVK + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-------W 714
E + ++V L G L+ + M +G L L + + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMP 773
+ +++A A G+AYL+ + +HRD+ + N ++ +F + DFG+ R I TA
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY 186
Query: 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
L + ++ PE SD++SFG+VL EI +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 132
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 133 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 188
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETI 666
F+D+ + E+ ++G GA + V C L S+ AVK + Q H E+E +
Sbjct: 10 FEDVYQLQED-----VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML 64
Query: 667 GSIR-HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA 725
+ HRN++ L + L ++ M GS+ +H K+ + + A
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVA 121
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIAR-------CIPTAMPHA 775
L +LH N I HRD+K NIL + + + DFG+ C P + P
Sbjct: 122 SALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 776 STFVLGTIGYIDPEYA-----HTSRLNEKSDVYSFGIVLLEILTG 815
T G+ Y+ PE S +++ D++S G++L +L+G
Sbjct: 179 LT-PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYA 681
+G G VYK A+KK+ + T E+ + ++H NIV L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 682 LSPYGNLLFYDYMVN--GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739
+ +L ++++ L D+ G + V T + G+AY H + R+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCH---DRRV 121
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
+HRD+K N+LI+ + ++DFG+AR + + V+ T+ Y P+ S+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 800 S-DVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ D++S G + E++ G S QL+
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEADQLM 211
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVR--EHKDNIGSQYLLNWCVQI 126
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 182
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFET--ELETIGSIRHRNIVSLHGYA 681
+G G VYK A+KK+ + T E+ + ++H NIV L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 682 LSPYGNLLFYDYMVN--GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739
+ +L ++++ L D+ G + V T + G+AY H + R+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESV-----TAKSFLLQLLNGIAYCH---DRRV 121
Query: 740 IHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
+HRD+K N+LI+ + ++DFG+AR + + V+ T+ Y P+ S+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 800 S-DVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ D++S G + E++ G S QL+
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 136
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 137 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 192
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 23/201 (11%)
Query: 624 VGYGASSTVYKCALKNSR-PIAVKKLYNQYPHNLREFETE-LETIGSIRHRNIVSLHGYA 681
VG G+ V++ K + AVKK+ L F E L + IV L+G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 682 LS-PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA-QGLAYLHHDCNPRI 739
P+ N+ F + + GSL L+ K++ E R +G A +GL YLH RI
Sbjct: 120 REGPWVNI-FMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEYLH---TRRI 171
Query: 740 IHRDVKSSNILIDENFD-AHLSDFGIARCI-PTAMPHA---STFVLGTIGYIDPEYAHTS 794
+H DVK+ N+L+ + A L DFG A C+ P + + ++ GT ++ PE
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 795 RLNEKSDVYSFGIVLLEILTG 815
+ K D++S ++L +L G
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 23/201 (11%)
Query: 624 VGYGASSTVYKCALKNSR-PIAVKKLYNQYPHNLREFETE-LETIGSIRHRNIVSLHGYA 681
VG G+ V++ K + AVKK+ L F E L + IV L+G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 682 LS-PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA-QGLAYLHHDCNPRI 739
P+ N+ F + + GSL L+ K++ E R +G A +GL YLH RI
Sbjct: 136 REGPWVNI-FMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEYLH---TRRI 187
Query: 740 IHRDVKSSNILIDENFD-AHLSDFGIARCI-PTAMPHA---STFVLGTIGYIDPEYAHTS 794
+H DVK+ N+L+ + A L DFG A C+ P + + ++ GT ++ PE
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 795 RLNEKSDVYSFGIVLLEILTG 815
+ K D++S ++L +L G
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNG 268
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA-RCIPTAMPHAST 777
K+ V + L YL +IHRDVK SNIL+DE L DFGI+ R + S
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 778 FVLGTIG--YIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK 816
+ IDP + ++DV+S GI L+E+ TG+
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI---------PTAMPHASTFVLGTIGYIDPE 789
+IHRD+K SN+LI+ N D + DFG+AR I PT + T Y PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 790 YAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM 830
TS + + DV+S G +L E+ + HQL++
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLG 781
A+G+ +L + + IHRD+ + NIL+ E + DFG+AR I P + +
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 255
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA 841
+ ++ PE +SDV+SFG++L EI + + + + + + T M A
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 315
Query: 842 VD---PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE+ +Q L C PS+RPT E+
Sbjct: 316 PDYTTPEM-------------YQTMLDCWHGEPSQRPTFSEL 344
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 120
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 121 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 176
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLG 781
A+G+ +L + + IHRD+ + NIL+ E + DFG+AR I P + +
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 257
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA 841
+ ++ PE +SDV+SFG++L EI + + + + + + T M A
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 317
Query: 842 VD---PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE+ +Q L C PS+RPT E+
Sbjct: 318 PDYTTPEM-------------YQTMLDCWHGEPSQRPTFSEL 346
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 26/209 (12%)
Query: 624 VGYGASSTVYKCALKN---SRPIAV-------KKLYNQYPHNLREFE----TELETIGSI 669
+G GA V C KN + I V K Y+ N+ +F E+ + S+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
H NI+ L L ++ G L++ + K + D +K + G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS---GIC 160
Query: 730 YLHHDCNPRIIHRDVKSSNILIDEN---FDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
YLH I+HRD+K NIL++ + + DFG++ LGT YI
Sbjct: 161 YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR--LGTAYYI 215
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + NEK DV+S G+++ +L G
Sbjct: 216 APE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLG 781
A+G+ +L + + IHRD+ + NIL+ E + DFG+AR I P + +
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 264
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA 841
+ ++ PE +SDV+SFG++L EI + + + + + + T M A
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 324
Query: 842 VD---PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE+ +Q L C PS+RPT E+
Sbjct: 325 PDYTTPEM-------------YQTMLDCWHGEPSQRPTFSEL 353
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 128
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG A+ + HA +
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 184
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 128
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG A+ + HA +
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 184
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLG 781
A+G+ +L + + IHRD+ + NIL+ E + DFG+AR I P + +
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 262
Query: 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA 841
+ ++ PE +SDV+SFG++L EI + + + + + + T M A
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 322
Query: 842 VD---PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE+ +Q L C PS+RPT E+
Sbjct: 323 PDYTTPEM-------------YQTMLDCWHGEPSQRPTFSEL 351
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVSLHGY 680
+G GA S V +C + K+ N + R+ E E ++H NIV LH
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 681 ALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740
+ L +D + G L++ + V ++ + + Q L + H ++
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDI------VAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 741 HRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTF-VLGTIGYIDPEYAHTSRL 796
HRD+K N+L+ L+DFG+A I + F GT GY+ PE
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 797 NEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMSKADD--NTVMEAVDPEVS 847
+ D+++ G++L +L G +++ L+Q I + A D + + V PE
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 256
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKI-AVGAAQGLAYLHHDCNPRIIHRDVKS 746
L F VNG DL+ K + D E R + A L +LH + II+RD+K
Sbjct: 99 LFFVMEFVNGG--DLMFHIQKSRRFD-EARARFYAAEIISALMFLH---DKGIIYRDLKL 152
Query: 747 SNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFG 806
N+L+D L+DFG+ + +TF GT YI PE D ++ G
Sbjct: 153 DNVLLDHEGHCKLADFGMCKEGICNGVTTATFC-GTPDYIAPEILQEMLYGPAVDWWAMG 211
Query: 807 IVLLEILTGKK--AVDNESNLHQLIMS 831
++L E+L G +NE +L + I++
Sbjct: 212 VLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+GL +LH +C I+HRD+K NIL+ L+DFG+AR M A V+ T+ Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALDPVVVTLWY 177
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
PE S D++S G + E+ K S QL
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPHNLR-EFET 661
D+ S E ++ +G G+ VY+ ++ +AVK + R EF
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 66
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-------W 714
E + ++V L G L+ + M +G L L + + +
Sbjct: 67 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 126
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMP 773
+ +++A A G+AYL+ + +HRD+ + N ++ +F + DFG+ R I T
Sbjct: 127 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 183
Query: 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
L + ++ PE SD++SFG+VL EI +
Sbjct: 184 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPHNLR-EFET 661
D+ S E ++ +G G+ VY+ ++ +AVK + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-------W 714
E + ++V L G L+ + M +G L L + + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMP 773
+ +++A A G+AYL+ + +HRD+ + N ++ +F + DFG+ R I T
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
L + ++ PE SD++SFG+VL EI +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 130
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG A+ + HA +
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 186
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 631 TVYKCALKNSRPIAVKKLYNQYPHNLREFETE-LETIGSIRHRNIVSLHGYALS-PYGNL 688
T ++CA+K R L F E L + IV L+G P+ N+
Sbjct: 96 TGFQCAVKKVR--------------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 141
Query: 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA-QGLAYLHHDCNPRIIHRDVKSS 747
F + + GSL L+ K++ E R +G A +GL YLH RI+H DVK+
Sbjct: 142 -FMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKAD 193
Query: 748 NILIDENFD-AHLSDFGIARCI-PTAMPHA---STFVLGTIGYIDPEYAHTSRLNEKSDV 802
N+L+ + A L DFG A C+ P + + ++ GT ++ PE + K D+
Sbjct: 194 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 253
Query: 803 YSFGIVLLEILTG 815
+S ++L +L G
Sbjct: 254 WSSCCMMLHMLNG 266
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 43/228 (18%)
Query: 612 MRSTENLSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIG 667
+R + +E Y ++G GA V K S+ + KL +++ E ++
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKF-----EMIKRSDSAF 121
Query: 668 SIRHRNIVSLHGYALSPYGNLLF------------YDYMVNGSLWDLLHG---PSKKVKL 712
R+I++ +A SP+ LF +YM G L +L+ P K K
Sbjct: 122 FWEERDIMA---FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF 178
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA-RCIPTA 771
+ + +A+ A + +IHRDVK N+L+D++ L+DFG + T
Sbjct: 179 -YTAEVVLALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 228
Query: 772 MPHASTFVLGTIGYIDPEYAHTS----RLNEKSDVYSFGIVLLEILTG 815
M H T V GT YI PE + + D +S G+ L E+L G
Sbjct: 229 MVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLL--HGPSKKVKL 712
+L++ E+ + + H NIV L + L +Y G ++D L HG K+
Sbjct: 49 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-- 106
Query: 713 DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772
+ + + V A Q Y H I+HRD+K+ N+L+D + + ++DFG + T
Sbjct: 107 EARAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFG 159
Query: 773 PHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
TF G+ Y PE + + + DV+S G++L +++G D + NL +L
Sbjct: 160 NKLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKEL 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
+L++ E+ + + H NIV L + L +Y G ++D L + + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR-------- 766
+ + V A Q Y H I+HRD+K+ N+L+D + + ++DFG +
Sbjct: 116 RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 767 -CIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNL 825
A P+A+ + Y PE DV+S G++L +++G D + NL
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPE----------VDVWSLGVILYTLVSGSLPFDGQ-NL 218
Query: 826 HQL 828
+L
Sbjct: 219 KEL 221
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
+L++ E+ + + H NIV L + L +Y G ++D L + + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774
+ + V A Q Y H I+HRD+K+ N+L+D + + ++DFG + T
Sbjct: 116 RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNK 168
Query: 775 ASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
F G+ Y PE + + + DV+S G++L +++G D + NL +L
Sbjct: 169 LDEFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKEL 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+GL +LH +C I+HRD+K NIL+ L+DFG+AR M A V+ T+ Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALFPVVVTLWY 177
Query: 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
PE S D++S G + E+ K S QL
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 176
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 845 EVS 847
V+
Sbjct: 237 GVT 239
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 115 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 170
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 845 EVS 847
V+
Sbjct: 231 GVT 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 176
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 845 EVS 847
V+
Sbjct: 237 GVT 239
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 133
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG A+ + HA +
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 189
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 19/235 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVSLHGY 680
+G GA S V +C + K+ N + R+ E E ++H NIV LH
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 681 ALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740
+ L +D + G L++ + V ++ + + Q L ++H I+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI------VAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 741 HRDVKSSNILI---DENFDAHLSDFGIARCIPTAMPHASTF-VLGTIGYIDPEYAHTSRL 796
HRD+K N+L+ + L+DFG+A I + F GT GY+ PE
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMSKADD--NTVMEAVDPEVS 847
+ D+++ G++L +L G +++ L+Q I + A D + + V PE
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 168
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 845 EVS 847
V+
Sbjct: 229 GVT 231
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 168
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 845 EVS 847
V+
Sbjct: 229 GVT 231
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETEL 663
I+ D+ E+ ++G GA V K++R + KL +++ E
Sbjct: 57 TINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF-----EMIKRS 111
Query: 664 ETIGSIRHRNIVSLHGYALSPYGNLLFY------------DYMVNGSLWDLLHG---PSK 708
++ R+I++ +A SP+ LFY +YM G L +L+ P K
Sbjct: 112 DSAFFWEERDIMA---FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 168
Query: 709 KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA-RC 767
+ + + +A+ A + + IHRDVK N+L+D++ L+DFG +
Sbjct: 169 WARF-YTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKM 218
Query: 768 IPTAMPHASTFVLGTIGYIDPEYAHTS----RLNEKSDVYSFGIVLLEILTG 815
M T V GT YI PE + + D +S G+ L E+L G
Sbjct: 219 NKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 168
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 845 EVS 847
V+
Sbjct: 229 GVT 231
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++ GA TVYK K P+A+K+L P +E E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 133
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 189
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 33/246 (13%)
Query: 603 MAIHTFDDIMRSTENLSEKYI----VGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLR 657
M IH FD L +Y+ +G G + V+ + + +A+KK+ P +++
Sbjct: 2 MNIHGFD--------LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK 53
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD----------YMVNGSL-WDLLHGP 706
E++ I + H NIV + L P G+ L D Y+V + DL +
Sbjct: 54 HALREIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL 112
Query: 707 SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLSDFGIA 765
+ L+ RL +GL Y+H + ++HRD+K +N+ I+ E+ + DFG+A
Sbjct: 113 EQGPLLEEHARL-FMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Query: 766 RCIPTAMPHASTFVLGTIG--YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNE 822
R + H G + Y P + K+ D+++ G + E+LTGK
Sbjct: 169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228
Query: 823 SNLHQL 828
L Q+
Sbjct: 229 HELEQM 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETEL 663
I+ D+ E+ ++G GA V K++R + KL +++ E
Sbjct: 62 TINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF-----EMIKRS 116
Query: 664 ETIGSIRHRNIVSLHGYALSPYGNLLFY------------DYMVNGSLWDLLHG---PSK 708
++ R+I++ +A SP+ LFY +YM G L +L+ P K
Sbjct: 117 DSAFFWEERDIMA---FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 173
Query: 709 KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA-RC 767
+ + + +A+ A + + IHRDVK N+L+D++ L+DFG +
Sbjct: 174 WARF-YTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKM 223
Query: 768 IPTAMPHASTFVLGTIGYIDPEYAHTS----RLNEKSDVYSFGIVLLEILTG 815
M T V GT YI PE + + D +S G+ L E+L G
Sbjct: 224 NKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 623 IVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G GA S V+ + + A+K + E E+ + I+H NIV+L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 682 LSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
S L + G L+D + + D ++ + A + YLH + I+H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK---YLHEN---GIVH 129
Query: 742 RDVKSSNILI---DENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
RD+K N+L +EN ++DFG+++ + + GT GY+ PE ++
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC---GTPGYVAPEVLAQKPYSK 186
Query: 799 KSDVYSFGIVLLEILTG 815
D +S G++ +L G
Sbjct: 187 AVDCWSIGVITYILLCG 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 711 KLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770
KLD L++ +G+ Y+H + ++IHRD+K SNI + + + DFG+ +
Sbjct: 132 KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM 830
T GT+ Y+ PE + ++ D+Y+ G++L E+L S
Sbjct: 189 --DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF----F 242
Query: 831 SKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ D + + D + KT LL K P +RP E+ R
Sbjct: 243 TDLRDGIISDIFDKK-----------EKTLLQKLLSKK--PEDRPNTSEILR 281
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETEL 663
I+ D+ E+ ++G GA V K++R + KL +++ E
Sbjct: 62 TINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF-----EMIKRS 116
Query: 664 ETIGSIRHRNIVSLHGYALSPYGNLLFY------------DYMVNGSLWDLLHG---PSK 708
++ R+I++ +A SP+ LFY +YM G L +L+ P K
Sbjct: 117 DSAFFWEERDIMA---FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 173
Query: 709 KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA-RC 767
+ + + +A+ A + + IHRDVK N+L+D++ L+DFG +
Sbjct: 174 WARF-YTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKM 223
Query: 768 IPTAMPHASTFVLGTIGYIDPEYAHTS----RLNEKSDVYSFGIVLLEILTG 815
M T V GT YI PE + + D +S G+ L E+L G
Sbjct: 224 NKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 126
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG A+ + HA +
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 182
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 168
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 845 EVS 847
V+
Sbjct: 229 GVT 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 631 TVYKCALKNSRPIAVKKLYNQYPHNLREFETE-LETIGSIRHRNIVSLHGYALS-PYGNL 688
T ++CA+K R L F E L + IV L+G P+ N+
Sbjct: 117 TGFQCAVKKVR--------------LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNI 162
Query: 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA-QGLAYLHHDCNPRIIHRDVKSS 747
F + + GSL L+ K+ E R +G A +GL YLH + RI+H DVK+
Sbjct: 163 -FMELLEGGSLGQLV----KEQGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVKAD 214
Query: 748 NILI-DENFDAHLSDFGIARCI-PTAMPHA---STFVLGTIGYIDPEYAHTSRLNEKSDV 802
N+L+ + A L DFG A C+ P + + ++ GT ++ PE + K DV
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDV 274
Query: 803 YSFGIVLLEILTG 815
+S ++L +L G
Sbjct: 275 WSSCCMMLHMLNG 287
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+K+L P +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 128
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG A+ + HA +
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 184
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 19/235 (8%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE---FETELETIGSIRHRNIVSLHGY 680
+G GA S V +C + K+ N + R+ E E ++H NIV LH
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 681 ALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740
+ L +D + G L++ + V ++ + + Q L ++H I+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI------VAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 741 HRDVKSSNILI---DENFDAHLSDFGIARCIPTAMPHASTF-VLGTIGYIDPEYAHTSRL 796
HRD+K N+L+ + L+DFG+A I + F GT GY+ PE
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 797 NEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMSKADD--NTVMEAVDPEVS 847
+ D+++ G++L +L G +++ L+Q I + A D + + V PE
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKS 746
L F VNG DL++ + K + A + GL +LH II+RD+K
Sbjct: 94 RLYFVMEYVNGG--DLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH---KRGIIYRDLKL 148
Query: 747 SNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYIDPEYAHTSRLNEKSDVYSF 805
N+++D ++DFG+ C M +T GT YI PE + D +++
Sbjct: 149 DNVMLDSEGHIKIADFGM--CKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAY 206
Query: 806 GIVLLEILTGKKAVD--NESNLHQLIMS 831
G++L E+L G+ D +E L Q IM
Sbjct: 207 GVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 118 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 173
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 845 EVS 847
V+
Sbjct: 234 GVT 236
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 719 KIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778
KIAV + L +LH + +IHRDVK SN+LI+ DFGI+ + + A
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDV--AKDI 195
Query: 779 VLGTIGYIDPEYAHTSRLNE-----KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKA 833
G Y PE + LN+ KSD++S GI +E+ + D+ Q +
Sbjct: 196 DAGCKPYXAPERIN-PELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQL---- 250
Query: 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
V+E P++ V T Q C K+ ERPT E+ +
Sbjct: 251 --KQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELXQ 293
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA---------RCI 768
L I + A+ + +LH + ++HRD+K SNI + + DFG+ + +
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 769 PTAMPHASTFV--LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813
T MP +T +GT Y+ PE H + + K D++S G++L E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGY 680
+G G+ V+KC +++ + +A+KK P + E+ + ++H N+V+L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 681 ALSPYGNLLFYDYMVNGSLWDLLHG----PSKKVK-LDWETRLKIAVGAAQGLAYLH-HD 734
L ++Y + L +L P VK + W+T Q + + H H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCHKHN 122
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPE-YAHT 793
C IHRDVK NILI ++ L DFG AR + + V T Y PE
Sbjct: 123 C----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGD 177
Query: 794 SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK 832
++ DV++ G V E+L+G +S++ QL + +
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 643 IAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHG-----YALSPYG-NLLFYDYMV 695
+A+K+ + P N + E++ + + H N+VS L+P LL +Y
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 102
Query: 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID--- 752
G L L+ L + + L YLH + RIIHRD+K NI++
Sbjct: 103 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGP 159
Query: 753 ENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEI 812
+ + D G A+ + T +GT+ Y+ PE + D +SFG + E
Sbjct: 160 QRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 217
Query: 813 LTG 815
+TG
Sbjct: 218 ITG 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 613 RSTENLSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE--FETELETI 666
+ E++ + Y ++G GA S V K ++ + K + +E E E+ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
I+H NIV+L S L + G L+D + + D +RL V A
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDA- 128
Query: 727 GLAYLHHDCNPRIIHRDVKSSNIL---IDENFDAHLSDFGIARC-IPTAMPHASTFVLGT 782
+ YLH + I+HRD+K N+L +DE+ +SDFG+++ P ++ + GT
Sbjct: 129 -VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GT 181
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIM 830
GY+ PE ++ D +S G++ +L G +N++ L + I+
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 11/165 (6%)
Query: 658 EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD---- 713
EF E + ++V L G L+ + M +G L L + + +
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 714 ---WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-P 769
+ +++A A G+AYL+ + +HRD+ + N ++ +F + DFG+ R I
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
T L + ++ PE SD++SFG+VL EI +
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 643 IAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHG-----YALSPYG-NLLFYDYMV 695
+A+K+ + P N + E++ + + H N+VS L+P LL +Y
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 101
Query: 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID--- 752
G L L+ L + + L YLH + RIIHRD+K NI++
Sbjct: 102 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGP 158
Query: 753 ENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEI 812
+ + D G A+ + T +GT+ Y+ PE + D +SFG + E
Sbjct: 159 QRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 216
Query: 813 LTG 815
+TG
Sbjct: 217 ITG 219
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 30/193 (15%)
Query: 631 TVYKCALKNSRPIAVKKLYNQYPHNLREFETE-LETIGSIRHRNIVSLHGYALS-PYGNL 688
T ++CA+K R L F E L + IV L+G P+ N+
Sbjct: 98 TGFQCAVKKVR--------------LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNI 143
Query: 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA-QGLAYLHHDCNPRIIHRDVKSS 747
F + + GSL L+ K+ E R +G A +GL YLH + RI+H DVK+
Sbjct: 144 -FMELLEGGSLGQLV----KEQGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVKAD 195
Query: 748 NILI-DENFDAHLSDFGIARCI-PTAMPH---ASTFVLGTIGYIDPEYAHTSRLNEKSDV 802
N+L+ + A L DFG A C+ P + ++ GT ++ PE + K DV
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDV 255
Query: 803 YSFGIVLLEILTG 815
+S ++L +L G
Sbjct: 256 WSSCCMMLHMLNG 268
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 612 MRSTENLSEKYIVGYGASSTVYKCALKNSRPI-AVKKLY-----NQYPHN-LREFETELE 664
M+ E L + +G G TV+K + + I A+K++ P + LRE +
Sbjct: 1 MQKYEKLEK---IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE----IC 53
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG--SLWDLLHGPSKKVKLDWETRLKIAV 722
+ ++H+NIV LH S L +++ +D +G LD E
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG-----DLDPEIVKSFLF 108
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT 782
+GL + H + ++HRD+K N+LI+ N + L+DFG+AR + S V+ T
Sbjct: 109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-T 164
Query: 783 IGYIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAV 819
+ Y P+ ++L S D++S G + E+ + +
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 62/294 (21%), Positives = 119/294 (40%), Gaps = 46/294 (15%)
Query: 606 HTFDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELE 664
HT D R + E ++G G V+K + + + +K++ +N + E E++
Sbjct: 3 HTVDK--RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVK 56
Query: 665 TIGSIRHRNIVSLHG----YALSPYGN------------LLFYDYMVNGSLWDLLHGPSK 708
+ + H NIV +G + P + + ++ G+L + +
Sbjct: 57 ALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRR 115
Query: 709 KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768
KLD L++ +G+ Y+H + ++I+RD+K SNI + + + DFG+ +
Sbjct: 116 GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
+ GT+ Y+ PE + ++ D+Y+ G++L E+L S
Sbjct: 173 KNDGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF--- 227
Query: 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ D + + D + KT LL K P +RP E+ R
Sbjct: 228 -FTDLRDGIISDIFDKK-----------EKTLLQKLLSKK--PEDRPNTSEILR 267
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++ GA TVYK K P+A+K+L P +E E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 133
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 189
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 279 TGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGK-LEQLFELNLADNNL 337
T KL L NKL+ ++KL L L +N+L T+PA + K L+ L L + DN L
Sbjct: 39 TKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKL 97
Query: 338 EGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRII 397
+ L + + N+L P F +L LTYL+L N + ++
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 398 NLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFN 455
+L L L N + L L TL L N L + F +L ++ + + N
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 211 LDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIP 270
+D S ++T IP NI L LQ NKL+ + + L +L L++N+L
Sbjct: 21 VDCSSKKLTA-IPSNIPA-DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78
Query: 271 PILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFEL 330
I L L++ NKL + L+ L+L NQL P L +L L
Sbjct: 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYL 138
Query: 331 NLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVP 390
+L N L+ T+L + ++ N+L +F L L L L N K +VP
Sbjct: 139 SLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVP 197
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 135 NLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNL 194
N ++D + +LT IP I + + L L+ N L+ + S +LT L + N L
Sbjct: 17 NKNSVDCSSKKLTA-IPSNIPADT--KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL 73
Query: 195 TGTIPDSI-GNCTSFEILDISYNQITGEIPYNI--GFLQVATLSLQGNKLTGKIPEVIGL 251
T+P I + E L ++ N++ +P + + +A L L N+L P V
Sbjct: 74 Q-TLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS 131
Query: 252 MQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNN 311
+ L L L NEL + L+ +L L+ N+L +++L L+L NN
Sbjct: 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191
Query: 312 QLVGTIPAELGKLEQLFELNLADN 335
QL LE+L L L +N
Sbjct: 192 QLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 2/155 (1%)
Query: 65 QSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISK-LKQLEFLNLKNNQLT 123
+ +D Q NKL+ L + L+DN L +P I K LK LE L + +N+L
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQ 98
Query: 124 GPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTG 183
Q+ NL L L RNQL PR+ L YL L N L + +LT
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS 158
Query: 184 LWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQI 218
L + N L + T + L + NQ+
Sbjct: 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 341 IPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLD 400
IP NI + T + ++ N+LS +F L L L L+ N + + NL+
Sbjct: 31 IPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88
Query: 401 TLDLSVNNFSGSVPASIGD-LEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSG 459
TL ++ N ++P + D L +L L L RN L L P F +L + + + +N+L
Sbjct: 89 TLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ- 146
Query: 460 SIP 462
S+P
Sbjct: 147 SLP 149
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 306 LQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNI-SSCTALNQFNVHGNRLSGA 364
L LQ+N+L +L +L L L DN L+ +P I L V N+L
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 365 IPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGD-LEHL 423
F L +L L L RN K P + L L L N S+P + D L L
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSL 159
Query: 424 LTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLS 458
L L N L + F L ++T+ + NQL
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 6/142 (4%)
Query: 317 IPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLT 376
IPA+ KL+ L N L T L ++ N+L F+ L +L
Sbjct: 35 IPADTKKLD------LQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88
Query: 377 YLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGL 436
L ++ N + +++NL L L N P L L L+L N L L
Sbjct: 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL 148
Query: 437 LPAEFGNLRSIQTIDMSFNQLS 458
F L S++ + + NQL
Sbjct: 149 PKGVFDKLTSLKELRLYNNQLK 170
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 9/128 (7%)
Query: 61 LRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNN 120
L NL + N+L P + L ++ L N L KL L+ L L NN
Sbjct: 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN 167
Query: 121 QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWN-EVLQYLGLRGNALTGMLSPDMC 179
QL ++ LKTL L NQL +P + + E L+ L L+ N P C
Sbjct: 168 QLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN-------PWDC 219
Query: 180 QLTGLWYF 187
G+ Y
Sbjct: 220 TCNGIIYM 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPHNLR-EFET 661
D+ S E ++ +G G+ VY+ ++ +AVK + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-------W 714
E + ++V L G L+ + M +G L L + + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMP 773
+ +++A A G+AYL+ + +HRD+ + N ++ +F + DFG+ R I T
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
L + ++ PE SD++SFG+VL EI +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++G GA TVYK K P+A+ +L P +E E
Sbjct: 45 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 160
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 161 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 216
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 655 NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDW 714
+L++ E+ + H NIV L + L +Y G ++D L + + +
Sbjct: 56 SLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA 115
Query: 715 ETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR-------- 766
+ + V A Q Y H I+HRD+K+ N+L+D + + ++DFG +
Sbjct: 116 RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL 169
Query: 767 -CIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNL 825
A P+A+ + Y PE DV+S G++L +++G D + NL
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPE----------VDVWSLGVILYTLVSGSLPFDGQ-NL 218
Query: 826 HQL 828
+L
Sbjct: 219 KEL 221
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIA 721
E+ + + H NI+ L+ + L + G L+D + K ++D +K
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 722 VGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDA--HLSDFGIARCIPTAMPHASTF 778
+ G+ YLH I+HRD+K N+L++ + DA + DFG++
Sbjct: 146 LS---GVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER- 198
Query: 779 VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
LGT YI PE + +EK DV+S G++L +L G
Sbjct: 199 -LGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAG 233
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)
Query: 611 IMRSTENLSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELE 664
I++ TE + ++ GA TVYK K P+A+K+L P +E E
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGA 724
+ S+ + ++ L G L+ L+ M G L D + K + + L V
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQI 126
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP--HASTFVLGT 782
A+G+ YL + R++HRD+ + N+L+ ++DFG+A+ + HA +
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 182
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVD 820
I ++ E +SDV+S+G+ + E++T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 741 HRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKS 800
HRDVK NIL+ + A+L DFGIA +GT+ Y PE S ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 801 DVYSFGIVLLEILTG 815
D+Y+ VL E LTG
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
TE + + RH + +L YA + L F +Y G L+ H ++V + R
Sbjct: 54 TESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARF- 109
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
L YLH + +++RD+K N+++D++ ++DFG+ + + TF
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
GT Y+ PE + D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGL++ H + R++HRD+K N+LI+ L+DFG+AR + T + T+ Y
Sbjct: 114 QGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 180/434 (41%), Gaps = 43/434 (9%)
Query: 58 IGDLRNLQSIDFQGNKLTG-QIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
IG L+ L+ ++ N + ++P+ N +L H++LS N + + L Q+ LN
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179
Query: 117 LKNNQLTGPI----PSTLTQIP--------NLKTLDLARNQLTG----EIPRLI---YWN 157
L + P+ P +I N +L++ + + G E+ RL+ + N
Sbjct: 180 LSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 239
Query: 158 EVLQYLGLRGNALTGMLSPDMCQLT----GLWYFDVRGNNLTGTIPDSIGNCTSFEILDI 213
E +AL G+ C LT L Y D +++ + + N +SF ++ +
Sbjct: 240 EG-NLEKFDKSALEGL-----CNLTIEEFRLAYLDYYLDDIIDLF-NCLTNVSSFSLVSV 292
Query: 214 SYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPI- 272
+ ++ + YN G+ + ++ + G+ P + +++L L + N+ +
Sbjct: 293 TIERV-KDFSYNFGWQHLELVNCK----FGQFPTLK--LKSLKRLTFTSNKGGNAFSEVD 345
Query: 273 LGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNL 332
L +L + L +G G + L YL L N ++ T+ + LEQL L+
Sbjct: 346 LPSLEFLD-LSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDF 403
Query: 333 ADNNLEGPIPHNIS-SCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGK-VP 390
+NL+ ++ S L ++ A F L SL L ++ N+F+ +P
Sbjct: 404 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 463
Query: 391 TELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTI 450
+ NL LDLS P + L L LN+S N+ L + L S+Q +
Sbjct: 464 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 523
Query: 451 DMSFNQLSGSIPAE 464
D S N + S E
Sbjct: 524 DYSLNHIMTSKKQE 537
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 179/453 (39%), Gaps = 81/453 (17%)
Query: 58 IGDLRNLQSIDFQGNKLTG-QIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
IG L+ L+ ++ N + ++P+ N +L H++LS N + + L Q+ LN
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 203
Query: 117 LKNNQLTGPI----PSTLTQIP--------NLKTLDLARNQLTG----EIPRLI---YWN 157
L + P+ P +I N +L++ + + G E+ RL+ + N
Sbjct: 204 LSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 263
Query: 158 EVLQYLGLRGNALTGMLSPDMCQLT----GLWYFDVRGNNLTGTIP--DSIGNCTSFEIL 211
E +AL G+ C LT L Y D L G I + + N +SF ++
Sbjct: 264 EG-NLEKFDKSALEGL-----CNLTIEEFRLAYLDYY---LDGIIDLFNCLTNVSSFSLV 314
Query: 212 DISYNQITGEIPYNIG----------FLQVATLSLQG--------NKLTGKIPEVIGLMQ 253
++ ++ + YN G F Q TL L+ NK EV +
Sbjct: 315 SVTIERVK-DFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD--LP 371
Query: 254 ALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQL 313
+L LDLS N LS+ G + G +S L YL L N +
Sbjct: 372 SLEFLDLSRN-----------GLSFKG----------CCSQSDFGTIS-LKYLDLSFNGV 409
Query: 314 VGTIPAELGKLEQLFELNLADNNLEGPIPHNIS-SCTALNQFNVHGNRLSGAIPSSFRNL 372
+ T+ + LEQL L+ +NL+ ++ S L ++ A F L
Sbjct: 410 I-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 468
Query: 373 GSLTYLNLSRNNFKGK-VPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRN 431
SL L ++ N+F+ +P + NL LDLS P + L L LN+S N
Sbjct: 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528
Query: 432 HLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAE 464
+ L + L S+Q +D S N + S E
Sbjct: 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 561
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETI 666
F+D+ + E+ ++G GA + V C L S+ AVK + Q H E+E +
Sbjct: 10 FEDVYQLQED-----VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML 64
Query: 667 GSIR-HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA 725
+ HRN++ L + L ++ M GS+ +H K+ + + A
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVA 121
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILID---ENFDAHLSDFGIAR-------CIPTAMPHA 775
L +LH N I HRD+K NIL + + + DF + C P + P
Sbjct: 122 SALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 776 STFVLGTIGYIDPEYA-----HTSRLNEKSDVYSFGIVLLEILTG 815
T G+ Y+ PE S +++ D++S G++L +L+G
Sbjct: 179 LT-PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 845 EVS 847
V+
Sbjct: 233 GVT 235
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
TE + + RH + +L YA + L F +Y G L+ H ++V + R
Sbjct: 54 TESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARF- 109
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
L YLH + +++RD+K N+++D++ ++DFG+ + + TF
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
GT Y+ PE + D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 117 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 845 EVS 847
V+
Sbjct: 233 GVT 235
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 845 EVS 847
V+
Sbjct: 233 GVT 235
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 118 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 173
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 845 EVS 847
V+
Sbjct: 234 GVT 236
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 614 STENLSEKYIVGYGASSTVYKCALKNSRP----IAVKKLYNQYP-HNLREFETELETIGS 668
+ E++ I+G G VY+ N + +AVK N +F +E + +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 669 IRHRNIVSLHG----------YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRL 718
+ H +IV L G L PYG L Y SL L T +
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL-------------TLV 128
Query: 719 KIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777
++ + +AYL +C +HRD+ NIL+ L DFG++R I + ++
Sbjct: 129 LYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817
I ++ PE + R SDV+ F + + EIL+ K
Sbjct: 185 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 224
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
TE + + RH + +L YA + L F +Y G L+ H ++V + R
Sbjct: 57 TESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARF- 112
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
L YLH + +++RD+K N+++D++ ++DFG+ + + TF
Sbjct: 113 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 169
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
GT Y+ PE + D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 170 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 221
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 115 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 845 EVS 847
V+
Sbjct: 231 GVT 233
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 115 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 845 EVS 847
V+
Sbjct: 231 GVT 233
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 116 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 171
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 845 EVS 847
V+
Sbjct: 232 GVT 234
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 845 EVS 847
V+
Sbjct: 233 GVT 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 845 EVS 847
V+
Sbjct: 233 GVT 235
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 116 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 171
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 845 EVS 847
V+
Sbjct: 232 GVT 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
++G G+ V++ L S +A+KK+ + R EL+ + ++H N+V L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVL----QDKRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 683 S--PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWET-RLKIAVGAAQ---GLAYLHHDCN 736
S + +F + ++ + KL L I + Q LAY+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG- 161
Query: 737 PRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH-TS 794
I HRD+K N+L+D L DFG A+ + P+ S + + Y PE +
Sbjct: 162 --ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRYYRAPELIFGAT 217
Query: 795 RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
D++S G V+ E++ G+ ES + QL+
Sbjct: 218 NYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 614 STENLSEKYIVGYGASSTVYKCALKNSRP----IAVKKLYNQYP-HNLREFETELETIGS 668
+ E++ I+G G VY+ N + +AVK N +F +E + +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 669 IRHRNIVSLHG----------YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRL 718
+ H +IV L G L PYG L Y SL L T +
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL-------------TLV 116
Query: 719 KIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777
++ + +AYL +C +HRD+ NIL+ L DFG++R I + ++
Sbjct: 117 LYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817
I ++ PE + R SDV+ F + + EIL+ K
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 116 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 171
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 845 EVS 847
V+
Sbjct: 232 GVT 234
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 116 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 171
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 845 EVS 847
V+
Sbjct: 232 GVT 234
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 115 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 845 EVS 847
V+
Sbjct: 231 GVT 233
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQ-----YP-HNLREFE 660
F D + E L++ +G G V+K K + +A+KK+ + +P LRE
Sbjct: 13 FCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE-- 67
Query: 661 TELETIGSIRHRNIVSL---HGYALSPYGN-----LLFYDYM---VNGSLWDLLHGPSKK 709
++ + ++H N+V+L SPY L +D+ + G L ++L
Sbjct: 68 --IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------ 119
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
VK ++ GL Y+H + +I+HRD+K++N+LI + L+DFG+AR
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 770 TA---MPHASTFVLGTIGYIDPEYAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNL 825
A P+ + T+ Y PE R D++ G ++ E+ T + +
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
Query: 826 HQLIM 830
HQL +
Sbjct: 237 HQLAL 241
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 189/431 (43%), Gaps = 66/431 (15%)
Query: 58 IGDLRNLQSIDFQGNKLTG-QIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
IG L+ L+ ++ N + ++P+ N +L H++LS N + + L Q+ LN
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179
Query: 117 LKNNQLTGPI----PSTLTQIP--------NLKTLDLARNQLTG----EIPRLI---YWN 157
L + P+ P +I N +L++ + + G E+ RL+ + N
Sbjct: 180 LSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 239
Query: 158 EVLQYLGLRGNALTGMLSPDMCQLT----GLWYFDVRGNNLTGTIPDSIGNCTSFEILDI 213
E +AL G+ C LT L Y D +++ + + N +SF ++ +
Sbjct: 240 EG-NLEKFDKSALEGL-----CNLTIEEFRLAYLDYYLDDIIDLF-NCLTNVSSFSLVSV 292
Query: 214 SYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPI- 272
+ ++ + YN G+ + ++ + G+ P + +++L L + N+ +
Sbjct: 293 TIERVK-DFSYNFGWQHLELVNCK----FGQFPTLK--LKSLKRLTFTSNKGGNAFSEVD 345
Query: 273 LGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNL 332
L +L + L +G G + L YL L N ++ T+ + LEQL L+
Sbjct: 346 LPSLEFL-DLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDF 403
Query: 333 ADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTE 392
+NL+ +++F+V F +L +L YL++S + +
Sbjct: 404 QHSNLK-----------QMSEFSV------------FLSLRNLIYLDISHTHTRVAFNGI 440
Query: 393 LGRIINLDTLDLSVNNFSGS-VPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTID 451
+ +L+ L ++ N+F + +P +L +L L+LS+ L L P F +L S+Q ++
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 452 MSFNQLSGSIP 462
M+ NQL S+P
Sbjct: 501 MASNQLK-SVP 510
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 61 LRNLQSIDFQGNKLTGQ-IPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKN 119
L +L+ + GN +PD +L ++LS L P + + L L+ LN+ +
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 120 NQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVL 160
NQL ++ +L+ + L N PR+ Y + L
Sbjct: 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 544
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVY-KCALKNSRPIAVKKLYNQYPHNLREFETELETI 666
F+D+ + T L +G GA + V +L+N + AVK + Q H+ E+ET+
Sbjct: 10 FEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL 64
Query: 667 GSIR-HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA 725
+ ++NI+ L + L ++ + GS +L K+ + ++ A
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVA 121
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFD---AHLSDFGIA-------RCIPTAMPHA 775
L +LH I HRD+K NIL + + DF + C P P
Sbjct: 122 AALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 776 STFVLGTIGYIDPEYA-----HTSRLNEKSDVYSFGIVLLEILTG 815
+T G+ Y+ PE + +++ D++S G+VL +L+G
Sbjct: 179 TT-PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 613 RSTENLSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE--FETELETI 666
+ E++ + Y ++G GA S V K ++ + K + +E E E+ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
I+H NIV+L S L + G L+D + + D +RL V A
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDA- 128
Query: 727 GLAYLHHDCNPRIIHRDVKSSNIL---IDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
+ YLH + I+HRD+K N+L +DE+ +SDFG+++ ++ GT
Sbjct: 129 -VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTP 182
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMS 831
GY+ PE ++ D +S G++ +L G +N++ L + I+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 845 EVS 847
V+
Sbjct: 229 GVT 231
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 614 STENLSEKYIVGYGASSTVYKCALKNSRP----IAVKKLYNQYP-HNLREFETELETIGS 668
+ E++ I+G G VY+ N + +AVK N +F +E + +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 669 IRHRNIVSLHG----------YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRL 718
+ H +IV L G L PYG L Y SL L T +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL-------------TLV 112
Query: 719 KIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777
++ + +AYL +C +HRD+ NIL+ L DFG++R I + ++
Sbjct: 113 LYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817
I ++ PE + R SDV+ F + + EIL+ K
Sbjct: 169 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQ-----YP-HNLREFE 660
F D + E L++ +G G V+K K + +A+KK+ + +P LRE
Sbjct: 13 FCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE-- 67
Query: 661 TELETIGSIRHRNIVSLHGYA---LSPYGNLLFYDYMVNGSLWDLLHG--PSKKVKLDWE 715
++ + ++H N+V+L SPY Y+V L G + VK
Sbjct: 68 --IKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 716 TRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA---M 772
++ GL Y+H + +I+HRD+K++N+LI + L+DFG+AR A
Sbjct: 126 EIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 773 PHASTFVLGTIGYIDPEYAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM 830
P+ + T+ Y PE R D++ G ++ E+ T + + HQL +
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 845 EVS 847
V+
Sbjct: 229 GVT 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 845 EVS 847
V+
Sbjct: 233 GVT 235
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 115 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 845 EVS 847
V+
Sbjct: 231 GVT 233
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
QGLA+ H + R++HRD+K N+LI+ L+DFG+AR + V+ T+ Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 786 IDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844
PE + + D++S G + E++T + +S + QL T E V P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 845 EVS 847
V+
Sbjct: 230 GVT 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 38/261 (14%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQ-----YP-HNLREFE 660
F D + E L++ +G G V+K K + +A+KK+ + +P LRE
Sbjct: 13 FCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE-- 67
Query: 661 TELETIGSIRHRNIVSLHGYA---LSPYGNL-----LFYDYM---VNGSLWDLLHGPSKK 709
++ + ++H N+V+L SPY L +D+ + G L ++L
Sbjct: 68 --IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------ 119
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
VK ++ GL Y+H + +I+HRD+K++N+LI + L+DFG+AR
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 770 TA---MPHASTFVLGTIGYIDPEYAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNL 825
A P+ + T+ Y PE R D++ G ++ E+ T + +
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
Query: 826 HQLIMSKADDNTVMEAVDPEV 846
HQL + ++ V P V
Sbjct: 237 HQLALISQLCGSITPEVWPNV 257
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 14/197 (7%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQY-----PHNLREFETELETIGSIRHRNIVSLHG 679
GYG V K N+ I K+ + + + E + ++H IV L
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI- 87
Query: 680 YALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
YA G L L +Y+ G L+ L ++ +T + L +LH
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLHQKG--- 141
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNE 798
II+RD+K NI+++ L+DFG+ + TF GTI Y+ PE S N
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC-GTIEYMAPEILMRSGHNR 200
Query: 799 KSDVYSFGIVLLEILTG 815
D +S G ++ ++LTG
Sbjct: 201 AVDWWSLGALMYDMLTG 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 620 EKYI----VGYGASSTVYKCALK-NSRPIAVKKLYNQYPHN-----LREFETELETIGSI 669
E YI +G G +TVYK K +A+K++ ++ +RE + + +
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIRE----VSLLKDL 57
Query: 670 RHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLA 729
+H NIV+LH + L ++Y+ + L L + + +L +GLA
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKL-FLFQLLRGLA 114
Query: 730 YLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC--IPTAMPHASTFVLGTIGYID 787
Y H +++HRD+K N+LI+E + L+DFG+AR IPT T+ Y
Sbjct: 115 YCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV---TLWYRP 168
Query: 788 PE-YAHTSRLNEKSDVYSFGIVLLEILTGK 816
P+ ++ + + D++ G + E+ TG+
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 31/293 (10%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPHNLR 657
+++ D+ S E ++ +G G+ VY+ ++ +AVK + R
Sbjct: 6 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 65
Query: 658 -EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD--- 713
EF E + ++V L G L+ + M +G L L + + +
Sbjct: 66 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 125
Query: 714 ----WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI- 768
+ +++A A G+AYL+ + +HR++ + N ++ +F + DFG+ R I
Sbjct: 126 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
Query: 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQ 827
T L + ++ PE SD++SFG+VL EI + ++ SN +
Sbjct: 183 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--E 240
Query: 828 LIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
++ D ++ D C + + L +C + P+ RPT E+
Sbjct: 241 QVLKFVMDGGYLDQPD-----NCPE-----RVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 83 YSSGEKKDVVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 196
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 31/293 (10%)
Query: 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPHNLR 657
+++ D+ S E ++ +G G+ VY+ ++ +AVK + R
Sbjct: 5 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 658 -EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD--- 713
EF E + ++V L G L+ + M +G L L + + +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 714 ----WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI- 768
+ +++A A G+AYL+ + +HR++ + N ++ +F + DFG+ R I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQ 827
T L + ++ PE SD++SFG+VL EI + ++ SN +
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--E 239
Query: 828 LIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
++ D ++ D C + + L +C + P+ RPT E+
Sbjct: 240 QVLKFVMDGGYLDQPD-----NCPE-----RVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 84 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 140
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 141 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 197
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 196
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 196
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 613 RSTENLSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE--FETELETI 666
+ E++ + Y ++G GA S V K ++ + K + +E E E+ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
I+H NIV+L S L + G L+D + + D +RL V A
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDA- 128
Query: 727 GLAYLHHDCNPRIIHRDVKSSNIL---IDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
+ YLH + I+HRD+K N+L +DE+ +SDFG+++ ++ GT
Sbjct: 129 -VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTP 182
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMS 831
GY+ PE ++ D +S G++ +L G +N++ L + I+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 87 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 143
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 144 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 200
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 624 VGYGASSTVYKCALKNSR---PIAVKKL---YNQYPHNLREFETELETIGSIRHRNIVSL 677
+G GA V CA ++ +AVKKL + H R + EL + + H+NI+SL
Sbjct: 32 IGSGAQGIV--CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISL 88
Query: 678 HGY-----ALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLH 732
L + ++ +++ +L ++H ++LD E + G+ +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 733 HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+ IIHRD+K SNI++ + + DFG+AR T V T Y PE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPEVIL 198
Query: 793 TSRLNEKSDVYSFGIVLLEILTG 815
D++S G ++ E++ G
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKG 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 114/261 (43%), Gaps = 38/261 (14%)
Query: 608 FDDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQ-----YP-HNLREFE 660
F D + E L++ +G G V+K K + +A+KK+ + +P LRE
Sbjct: 12 FCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE-- 66
Query: 661 TELETIGSIRHRNIVSLHGYA---LSPYGN-----LLFYDYM---VNGSLWDLLHGPSKK 709
++ + ++H N+V+L SPY L +D+ + G L ++L
Sbjct: 67 --IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------ 118
Query: 710 VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769
VK ++ GL Y+H + +I+HRD+K++N+LI + L+DFG+AR
Sbjct: 119 VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175
Query: 770 TA---MPHASTFVLGTIGYIDPEYAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNL 825
A P+ + T+ Y PE R D++ G ++ E+ T + +
Sbjct: 176 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 235
Query: 826 HQLIMSKADDNTVMEAVDPEV 846
HQL + ++ V P V
Sbjct: 236 HQLALISQLCGSITPEVWPNV 256
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 196
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 613 RSTENLSEKY----IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE--FETELETI 666
+ E++ + Y ++G GA S V K ++ + K + +E E E+ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
I+H NIV+L S L + G L+D + + D +RL V A
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-ASRLIFQVLDA- 128
Query: 727 GLAYLHHDCNPRIIHRDVKSSNIL---IDENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
+ YLH + I+HRD+K N+L +DE+ +SDFG+++ ++ GT
Sbjct: 129 -VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTP 182
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMS 831
GY+ PE ++ D +S G++ +L G +N++ L + I+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 95 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 151
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 152 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 208
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 95 DNSLYGDIPFSISK-LKQLEFLNLKNNQLTGPI---PSTLTQIPNLKTLDLARNQL---- 146
+NS +P S S+ LK LEFL+L N + + P+L+TL L++N L
Sbjct: 318 ENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQ 377
Query: 147 -TGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNC 205
TGEI + + L L + N M PD CQ W +R NL+ T + C
Sbjct: 378 KTGEILLTL---KNLTSLDISRNTFHPM--PDSCQ----WPEKMRFLNLSSTGIRVVKTC 428
Query: 206 --TSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSEN 263
+ E+LD+S N + +++ ++ L + NKL +P+ L L V+ +S N
Sbjct: 429 IPQTLEVLDVSNNNLDS---FSLFLPRLQELYISRNKL-KTLPDA-SLFPVLLVMKISRN 483
Query: 264 ELVGPIPPILGNLSYTGKLYLHGNKLTGPIP 294
+L I L+ K++LH N P
Sbjct: 484 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 59 GDLR---NLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFL 115
GDLR NLQ + + +++ D + GSL H++LSDN L L L++L
Sbjct: 44 GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYL 103
Query: 116 NLKNN--QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIY 155
NL N Q G + S + NL+TL + + EI R+ +
Sbjct: 104 NLMGNPYQTLG-VTSLFPNLTNLQTLRIGNVETFSEIRRIDF 144
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 102 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 215
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDA 757
+L D ++G + + L I + A+ + +LH + ++HRD+K SNI +
Sbjct: 101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVV 157
Query: 758 HLSDFGIA---------RCIPTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKSDVYSFG 806
+ DFG+ + + T MP + T +GT Y+ PE H + + K D++S G
Sbjct: 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLG 217
Query: 807 IVLLEIL 813
++L E+L
Sbjct: 218 LILFELL 224
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 91 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 204
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 96 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 152
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 153 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 209
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIA 721
E+ + + H NI+ L+ + L + G L+D + K ++D +K
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 113
Query: 722 VGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDA--HLSDFGIARCIPTAMPHASTF 778
+ G YLH I+HRD+K N+L++ ++ DA + DFG++
Sbjct: 114 LS---GTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER- 166
Query: 779 VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
LGT YI PE + +EK DV+S G++L +L G
Sbjct: 167 -LGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCG 201
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+ ++ ++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 676 SLHGYALSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
L + S Y NL+ DY+ H K L + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYID 787
AY+H I HRD+K N+L+D + L DFG A+ + P+ S + + Y
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 224
Query: 788 PEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
PE + DV+S G VL E+L G+ +S + QL+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 25/249 (10%)
Query: 613 RSTENLSEKYIVGYGASSTVYKCAL------KNSRPIAVKKLYNQYPHNLREFETELETI 666
R TE +G GA S V +C + I KKL + + ++ E E
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR---DHQKLEREARIC 64
Query: 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ 726
++H NIV LH + L +D + G L++ + V ++ + + Q
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI------VAREYYSEADASHCIQQ 118
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTF-VLGT 782
L + H ++HR++K N+L+ L+DFG+A I + F GT
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGT 176
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV--DNESNLHQLIMSKADD--NTV 838
GY+ PE + D+++ G++L +L G +++ L+Q I + A D +
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE 236
Query: 839 MEAVDPEVS 847
+ V PE
Sbjct: 237 WDTVTPEAK 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 20/223 (8%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+ ++ ++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 81
Query: 676 SLHGYALSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
L + S Y NL+ DY+ H K L + L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYID 787
AY+H + I HRD+K N+L+D + L DFG A+ + P+ S + + Y
Sbjct: 141 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 195
Query: 788 PEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
PE + DV+S G VL E+L G+ +S + QL+
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 238
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV L +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 95 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 208
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+ ++ ++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 112
Query: 676 SLHGYALSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
L + S Y NL+ DY+ H K L + L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYID 787
AY+H I HRD+K N+L+D + L DFG A+ + P+ S + + Y
Sbjct: 172 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 226
Query: 788 PEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
PE + DV+S G VL E+L G+ +S + QL+
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+ ++ ++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 676 SLHGYALSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
L + S Y NL+ DY+ H K L + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYID 787
AY+H I HRD+K N+L+D + L DFG A+ + P+ S + + Y
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 224
Query: 788 PEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
PE + DV+S G VL E+L G+ +S + QL+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 612 MRSTENLSEKYIVGYGASSTVYKCALKNSRPI-AVKKLY-----NQYPHN-LREFETELE 664
M+ E L + +G G TV+K + + I A+K++ P + LRE +
Sbjct: 1 MQKYEKLEK---IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE----IC 53
Query: 665 TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG--SLWDLLHGPSKKVKLDWETRLKIAV 722
+ ++H+NIV LH S L +++ +D +G LD E
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG-----DLDPEIVKSFLF 108
Query: 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT 782
+GL + H + ++HRD+K N+LI+ N + L++FG+AR + S V+ T
Sbjct: 109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-T 164
Query: 783 IGYIDPEYAHTSRLNEKS-DVYSFGIVLLEI 812
+ Y P+ ++L S D++S G + E+
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+ ++ ++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 114
Query: 676 SLHGYALSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
L + S Y NL+ DY+ H K L + L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYID 787
AY+H I HRD+K N+L+D + L DFG A+ + P+ S + + Y
Sbjct: 174 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 228
Query: 788 PEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
PE + DV+S G VL E+L G+ +S + QL+
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 20/223 (8%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+ ++ ++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 155
Query: 676 SLHGYALSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
L + S Y NL+ DY+ H K L + L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYID 787
AY+H I HRD+K N+L+D + L DFG A+ + P+ S + + Y
Sbjct: 215 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 269
Query: 788 PEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
PE + DV+S G VL E+L G+ +S + QL+
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 20/223 (8%)
Query: 617 NLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
+ ++ ++G G+ VY+ L +S +A+KK+ + R EL+ + + H NIV
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 104
Query: 676 SLHGYALSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728
L + S Y NL+ DY+ H K L + L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 729 AYLHHDCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYID 787
AY+H + I HRD+K N+L+D + L DFG A+ + P+ S + + Y
Sbjct: 164 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 218
Query: 788 PEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
PE + DV+S G VL E+L G+ +S + QL+
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIA 721
E+ + + H NI+ L+ + L + G L+D + K ++D +K
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 722 VGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDA--HLSDFGIARCIPTAMPHASTF 778
+ G YLH I+HRD+K N+L++ ++ DA + DFG++
Sbjct: 131 LS---GTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER- 183
Query: 779 VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838
LGT YI PE + +EK DV+S G++L +L G +++ Q I+ + +
Sbjct: 184 -LGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTD--QEILKRVEKGKF 239
Query: 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
+ DP D + QL L PS+R + +E
Sbjct: 240 --SFDPPDWTQVSDEAK-----QLVKLMLTYEPSKRISAEEA 274
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ RE L+ + + H NIV L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAA-QGLAYLHH 733
S Y NL+ DY V +++ + S+ + +K+ + + LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVL-DY-VPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 734 DCNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIF 195
Query: 793 -TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 16/198 (8%)
Query: 625 GYGASSTVYKCALKNSRPIAVKKLYNQY-----PHNLREFETELETIGSIRHRNIVSLHG 679
GYG V K N+ I K+ + + + E + ++H IV L
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI- 87
Query: 680 YALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR 738
YA G L L +Y+ G L+ L ++ +T + L +LH
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLHQKG--- 141
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYIDPEYAHTSRLN 797
II+RD+K NI+++ L+DFG+ C + T GTI Y+ PE S N
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGL--CKESIHDGTVTHXFCGTIEYMAPEILMRSGHN 199
Query: 798 EKSDVYSFGIVLLEILTG 815
D +S G ++ ++LTG
Sbjct: 200 RAVDWWSLGALMYDMLTG 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 43/246 (17%)
Query: 624 VGYGASSTVYK------------CALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRH 671
+G G+ TVYK C L++ + ++ + F+ E E + ++H
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER---------QRFKEEAEXLKGLQH 84
Query: 672 RNIVSLHGYALSPYGN----LLFYDYMVNGSLWDLLHG---PSKKVKLDWETRLKIAVGA 724
NIV + S +L + +G+L L KV W ++
Sbjct: 85 PNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------ 138
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLSDFGIARCIPTAMPHASTFVLGTI 783
+GL +LH P IIHRD+K NI I + D G+A + A V+GT
Sbjct: 139 LKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA---VIGTP 194
Query: 784 GYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGK---KAVDNESNLHQLIMSKADDNTVME 840
+ PE + + +E DVY+FG LE T + N + +++ + S + +
Sbjct: 195 EFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDK 253
Query: 841 AVDPEV 846
PEV
Sbjct: 254 VAIPEV 259
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E E+ + +RH +I+ L+ S ++ +Y N L+D + K + + +
Sbjct: 56 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ 114
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ A + Y H +I+HRD+K N+L+DE+ + ++DFG++ + F+
Sbjct: 115 QIISAVE---YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFL 163
Query: 780 LGTIGYIDPEYAHTSRLNEK------SDVYSFGIVLLEILTGKKAVDNES 823
+ G P YA ++ K DV+S G++L +L + D+ES
Sbjct: 164 KTSCG--SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E E+ + +RH +I+ L+ S ++ +Y N L+D + K + + +
Sbjct: 62 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ A + Y H +I+HRD+K N+L+DE+ + ++DFG++ + F+
Sbjct: 121 QIISAVE---YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFL 169
Query: 780 LGTIGYIDPEYAHTSRLNEK------SDVYSFGIVLLEILTGKKAVDNES 823
+ G P YA ++ K DV+S G++L +L + D+ES
Sbjct: 170 KTSCG--SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ RE L+ + + H NIV L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 196
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V A+ Y + I K ++ H L TE + + RH + +L Y+
Sbjct: 169 LVKEKATGRYYAMKILKKEVIVAK---DEVAHTL----TENRVLQNSRHPFLTALK-YSF 220
Query: 683 SPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
+ L F +Y G L H ++V + R L YLH + N +++
Sbjct: 221 QTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHSEKN--VVY 275
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
RD+K N+++D++ ++DFG+ + TF GT Y+ PE + D
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVD 334
Query: 802 VYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
+ G+V+ E++ G+ N+ + L +LI+
Sbjct: 335 WWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 365
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E E+ + +RH +I+ L+ S ++ +Y N L+D + K + + +
Sbjct: 52 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ 110
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ A + Y H +I+HRD+K N+L+DE+ + ++DFG++ + F+
Sbjct: 111 QIISAVE---YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFL 159
Query: 780 LGTIGYIDPEYAHTSRLNEK------SDVYSFGIVLLEILTGKKAVDNES 823
+ G P YA ++ K DV+S G++L +L + D+ES
Sbjct: 160 KTSCG--SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 95 DNSLYGDIPFSISK-LKQLEFLNLKNNQLTGPI---PSTLTQIPNLKTLDLARNQL---- 146
+NS +P S S+ LK LEFL+L N + + P+L+TL L++N L
Sbjct: 344 ENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQ 403
Query: 147 -TGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNC 205
TGEI + + L L + N M PD CQ W +R NL+ T + C
Sbjct: 404 KTGEILLTL---KNLTSLDISRNTFHPM--PDSCQ----WPEKMRFLNLSSTGIRVVKTC 454
Query: 206 T--SFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSEN 263
+ E+LD+S N + +++ ++ L + NKL +P+ L L V+ ++ N
Sbjct: 455 IPQTLEVLDVSNNNLDS---FSLFLPRLQELYISRNKL-KTLPDA-SLFPVLLVMKIASN 509
Query: 264 ELVGPIPPILGNLSYTGKLYLHGNKLTGPIP 294
+L I L+ K++LH N P
Sbjct: 510 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 540
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 59 GDLR---NLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFL 115
GDLR NLQ + + +++ D + GSL H++LSDN L L L++L
Sbjct: 70 GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYL 129
Query: 116 NLKNN--QLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIY 155
NL N Q G + S + NL+TL + + EI R+ +
Sbjct: 130 NLMGNPYQTLG-VTSLFPNLTNLQTLRIGNVETFSEIRRIDF 170
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 78/192 (40%), Gaps = 31/192 (16%)
Query: 273 LGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNL 332
L N+ Y L L GNKL L ++ L+YL L NQL KL L EL L
Sbjct: 62 LPNVRY---LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 333 ADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTE 392
+N L+ +P + F L +LTYLNL+ N +
Sbjct: 117 VENQLQS-LPDGV-----------------------FDKLTNLTYLNLAHNQLQSLPKGV 152
Query: 393 LGRIINLDTLDLSVNNFSGSVPASIGD-LEHLLTLNLSRNHLNGLLPAEFGNLRSIQTID 451
++ NL LDLS N S+P + D L L L L +N L + F L S+Q I
Sbjct: 153 FDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 211
Query: 452 MSFNQLSGSIPA 463
+ N + P
Sbjct: 212 LHDNPWDCTCPG 223
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 78/191 (40%), Gaps = 11/191 (5%)
Query: 231 VATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLT 290
V L+L GNKL + + L L L+ N+L + L+ +L L N+L
Sbjct: 65 VRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ 122
Query: 291 GPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNI-SSCT 349
++ L+YL L +NQL KL L EL+L+ N L+ +P + T
Sbjct: 123 SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLT 181
Query: 350 ALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNF 409
L ++ N+L F L SL Y+ L N + P + L +N
Sbjct: 182 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKH 234
Query: 410 SGSVPASIGDL 420
SG V S G +
Sbjct: 235 SGVVRNSAGSV 245
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 57 SIGDLRNLQSIDFQGNKLTG---QIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLE 113
++ +L NL + GN+L + D++ N LV +E SL + KL L
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGV---FDKLTNLT 136
Query: 114 FLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLR--GNALT 171
+LNL +NQL ++ NL LDL+ NQL +P ++ +++ Q LR N L
Sbjct: 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVF-DKLTQLKDLRLYQNQLK 194
Query: 172 GMLSPDMCQLTGLWYFDVRGNNLTGTIP 199
+ +LT L Y + N T P
Sbjct: 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Query: 106 ISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEV-LQYLG 164
I L + +L L N+L S L ++ NL L L NQL +P ++ L+ L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELV 115
Query: 165 LRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPY 224
L N L + +LT L Y ++ N L T+ LD+SYNQ+ +P
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPE 174
Query: 225 NI--GFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSEN 263
+ Q+ L L N+L V + +L + L +N
Sbjct: 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
TE + + RH + +L YA + L F +Y G L+ H ++V + R
Sbjct: 59 TESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARF- 114
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
L YLH + +++RD+K N+++D++ ++DFG+ + + F
Sbjct: 115 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 171
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
GT Y+ PE + D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 172 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
TE + + RH + +L YA + L F +Y G L+ H ++V + R
Sbjct: 54 TESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARF- 109
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
L YLH + +++RD+K N+++D++ ++DFG+ + + F
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
GT Y+ PE + D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 618 LSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVS 676
+S+ I+G G V+KC +A K + + + E + E+ + + H N++
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCN 736
L+ S +L +Y+ G L+D + S + T L + Q + H
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNL-----TELDTILFMKQICEGIRHMHQ 205
Query: 737 PRIIHRDVKSSNILIDENFDA---HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
I+H D+K NIL N DA + DFG+AR F GT ++ PE +
Sbjct: 206 MYILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVNF--GTPEFLAPEVVNY 262
Query: 794 SRLNEKSDVYSFGIVLLEILTG 815
++ +D++S G++ +L+G
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
E E+ + +RH +I+ L+ S ++ +Y N L+D + K + + +
Sbjct: 61 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ 119
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
+ A + Y H +I+HRD+K N+L+DE+ + ++DFG++ + F+
Sbjct: 120 QIISAVE---YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-----NFL 168
Query: 780 LGTIGYIDPEYAHTSRLNEK------SDVYSFGIVLLEILTGKKAVDNES 823
+ G P YA ++ K DV+S G++L +L + D+ES
Sbjct: 169 KTSCG--SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 623 IVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681
++G G+ VY+ L +S +A+KK+ RE L+ + + H NIV L +
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 682 LSP-------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
S Y NL+ DY+ H K L + LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVL-DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 735 CNPRIIHRDVKSSNILIDENFDA-HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH- 792
+ I HRD+K N+L+D + L DFG A+ + P+ S + + Y PE
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 196
Query: 793 TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829
+ DV+S G VL E+L G+ +S + QL+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V A+ Y + I K ++ H L TE + + RH + +L Y+
Sbjct: 166 LVKEKATGRYYAMKILKKEVIVAK---DEVAHTL----TENRVLQNSRHPFLTALK-YSF 217
Query: 683 SPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
+ L F +Y G L H ++V + R L YLH + N +++
Sbjct: 218 QTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHSEKN--VVY 272
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSD 801
RD+K N+++D++ ++DFG+ + TF GT Y+ PE + D
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVD 331
Query: 802 VYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
+ G+V+ E++ G+ N+ + L +LI+
Sbjct: 332 WWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
TE + + RH + +L YA + L F +Y G L+ H ++V + R
Sbjct: 54 TESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARF- 109
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
L YLH + +++RD+K N+++D++ ++DFG+ + + F
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
GT Y+ PE + D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 661 TELETIGSIRHRNIVSLHGYALSPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
TE + + RH + +L YA + L F +Y G L+ H ++V + R
Sbjct: 54 TESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARF- 109
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779
L YLH + +++RD+K N+++D++ ++DFG+ + + F
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
GT Y+ PE + D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 167 -GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785
+G+ YLH+ +IIHRD+K SN+L+ E+ ++DFG++ + S V GT +
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAF 203
Query: 786 IDPEYAHTSRL---NEKSDVYSFGIVLLEILTGKKAVDNES--NLHQLIMSKA 833
+ PE +R + DV++ G+ L + G+ +E LH I S+A
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQA 256
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 67/178 (37%), Gaps = 7/178 (3%)
Query: 243 GKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSK 302
G+ G+ LDL N L + L+ +LYL GNKL ++
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77
Query: 303 LSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLS 362
L+YL L NQL KL QL EL L N L+ T L ++ N+L
Sbjct: 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137
Query: 363 GAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDL 420
F L SL Y+ L N + P + L +N SG V S G +
Sbjct: 138 SVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNSAGSV 188
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Query: 315 GTIPAELGKLEQLFELNLADNNLEGPIPHNI-SSCTALNQFNVHGNRLSGAIPSSFRNLG 373
G G Q L+L N+L+ +P+ + T+L Q + GN+L F L
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76
Query: 374 SLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGD-LEHLLTLNLSRNH 432
SLTYLNLS N + ++ L L L+ N S+P + D L L L L +N
Sbjct: 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQ 135
Query: 433 LNGLLPAEFGNLRSIQTIDMSFNQLSGSIPA 463
L + F L S+Q I + N + P
Sbjct: 136 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 60 DLRNLQSIDFQGNKLTGQIPDEIGN-CGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLK 118
+L +L + GNKL +P+ + N SL ++ LS N L KL QL+ L L
Sbjct: 50 ELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108
Query: 119 NNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWN-EVLQYLGLRGNALTGMLSPD 177
NQL ++ LK L L +NQL +P ++ LQY+ L N P
Sbjct: 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDN-------PW 160
Query: 178 MCQLTGLWYFDVRGNNLTGTIPDSIGN 204
C G+ Y N +G + +S G+
Sbjct: 161 DCTCPGIRYLSEWINKHSGVVRNSAGS 187
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 162 YLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGN-CTSFEILDISYNQITG 220
YL L N+L + + +LT L + GN L ++P+ + N TS L++S NQ+
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ- 89
Query: 221 EIPYNI--GFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSY 278
+P + Q+ L+L N+L V + L L L +N+L + L+
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149
Query: 279 TGKLYLHGNKLTGPIP 294
++LH N P
Sbjct: 150 LQYIWLHDNPWDCTCP 165
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%)
Query: 231 VATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLT 290
+ L L GNKL V + +L L+LS N+L + L+ +L L+ N+L
Sbjct: 54 LTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ 113
Query: 291 GPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIP 342
+++L L+L NQL +L L + L DN + P
Sbjct: 114 SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 6/149 (4%)
Query: 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV 675
E L ++G G VY I + + L+ F+ E+ RH N+V
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC 735
G +SP + +L+ ++ K+ LD +IA +G+ YLH
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVR--DAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 736 NPRIIHRDVKSSNILIDENFDAHLSDFGI 764
I+H+D+KS N+ D N ++DFG+
Sbjct: 151 ---ILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 281 KLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGP 340
+LYL GN+ T +P EL N L+ + L NN++ + QL L L+ N L
Sbjct: 35 ELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 93
Query: 341 IPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRN 383
P +L ++HGN +S +F +L +L++L + N
Sbjct: 94 PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 346 SSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLS 405
+ CT L+ N+ +P +T L L N F VP EL +L +DLS
Sbjct: 6 TECTCLDTVVRCSNKGLKVLPKGIPR--DVTELYLDGNQFT-LVPKELSNYKHLTLIDLS 62
Query: 406 VNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLS 458
N S S ++ LLTL LS N L + P F L+S++ + + N +S
Sbjct: 63 NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 115
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 62 RNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQ 121
R++ + GN+ T +P E+ N L I+LS+N + S S + QL L L N+
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 122 LTGPIPSTLTQIPNLKTLDLARNQLT 147
L P T + +L+ L L N ++
Sbjct: 90 LRCIPPRTFDGLKSLRLLSLHGNDIS 115
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 95 DNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLI 154
D + + +P +S K L ++L NN+++ + + + L TL L+ N+L PR
Sbjct: 39 DGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 98
Query: 155 YWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNL 194
+ L+ L L GN ++ + L+ L + + N L
Sbjct: 99 DGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%)
Query: 334 DNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTEL 393
D N +P +S+ L ++ NR+S SF N+ L L LS N + P
Sbjct: 39 DGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTF 98
Query: 394 GRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHL 433
+ +L L L N+ S + DL L L + N L
Sbjct: 99 DGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 278 YTGKLYLHGNKLTGPIPPE--LGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADN 335
+T +L L+ N+L G I + G + L L+L+ NQL G P + EL L +N
Sbjct: 30 HTTELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88
Query: 336 NLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNF 385
++ L N++ N++S +P SF +L SLT LNL+ N F
Sbjct: 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 221 EIPYNIGFLQVATLSLQGNKLTGKIPE--VIGLMQALAVLDLSENELVGPIPPILGNLSY 278
EIP +I L L L N+L G+I + G + L L+L N+L G P S+
Sbjct: 22 EIPRDIP-LHTTELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH 79
Query: 279 TGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADN 335
+L L NK+ + +L L L +NQ+ +P L L LNLA N
Sbjct: 80 IQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 332 LADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPT 391
++ + L G +PH L + + N+L+G P++F + L L N K
Sbjct: 44 ISSDGLFGRLPH-------LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 392 ELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLN 434
+ L TL+L N S +P S L L +LNL+ N N
Sbjct: 97 MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 387 GKVPTELGRIINLDTLDLSVN-NFSGSVPAS--IGDLEHLLTLNLSRNHLNGLLPAEFGN 443
G+ E+ R I L T +L +N N G + + G L HL+ L L RN L G+ P F
Sbjct: 17 GRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG 76
Query: 444 LRSIQTIDMSFNQL 457
IQ + + N++
Sbjct: 77 ASHIQELQLGENKI 90
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 84 NCGSLVHIELSDNSLYG----DIPFSISKLKQLEFLNLKNNQLTGPIPST--LTQIPNLK 137
+C ++ H E + G +IP I L E L L +N+L G I S ++P+L
Sbjct: 1 DCPAMCHCEGTTVDCTGRGLKEIPRDIP-LHTTELL-LNDNEL-GRISSDGLFGRLPHLV 57
Query: 138 TLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGT 197
L+L RNQLTG P +Q L L N + + + L L ++ N ++
Sbjct: 58 KLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCV 117
Query: 198 IPDSIGNCTSFEILDISYN 216
+P S + S L+++ N
Sbjct: 118 MPGSFEHLNSLTSLNLASN 136
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 149 EIPRLI--YWNEVLQYLGLRGNALTGMLSPD--MCQLTGLWYFDVRGNNLTGTIPDSIGN 204
EIPR I + E+L L N L G +S D +L L +++ N LTG P++
Sbjct: 22 EIPRDIPLHTTELL----LNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG 76
Query: 205 CTSFEILDISYNQITGEIPYN--IGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSE 262
+ + L + N+I EI +G Q+ TL+L N+++ +P + +L L+L+
Sbjct: 77 ASHIQELQLGENKIK-EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLAS 135
Query: 263 N 263
N
Sbjct: 136 N 136
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 27/229 (11%)
Query: 606 HTFDDIMRSTENLSEKYIVGYGASSTVYKCALKNSR----PIAVKKLYNQY--PHNLREF 659
+D++ + + ++G G +V + LK +AVK L ++ EF
Sbjct: 13 EKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEF 72
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGN------LLFYDYMVNGSLWDLLHGP---SKKV 710
E + H ++ L G +L ++ +M +G L L
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 711 KLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770
L +T ++ V A G+ YL + IHRD+ + N ++ E+ ++DFG++R I +
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 771 AMPHASTFVLGTIGYIDPEYAHTSRLNE-----KSDVYSFGIVLLEILT 814
+ G + ++ L + SDV++FG+ + EI+T
Sbjct: 190 ----GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
GL +LH II+RD+K N+L+D++ + +SD G+A + + GT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFM 356
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGK-------KAVDNESNLHQLIMSKA 833
PE + D ++ G+ L E++ + + V+N+ L Q ++ +A
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-ELKQRVLEQA 409
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
GL +LH II+RD+K N+L+D++ + +SD G+A + + GT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFM 356
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGK-------KAVDNESNLHQLIMSKA 833
PE + D ++ G+ L E++ + + V+N+ L Q ++ +A
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-ELKQRVLEQA 409
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
GL +LH II+RD+K N+L+D++ + +SD G+A + + GT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFM 356
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGK-------KAVDNESNLHQLIMSKA 833
PE + D ++ G+ L E++ + + V+N+ L Q ++ +A
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-ELKQRVLEQA 409
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYI 786
GL +LH II+RD+K N+L+D++ + +SD G+A + + GT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFM 356
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTGK-------KAVDNESNLHQLIMSKA 833
PE + D ++ G+ L E++ + + V+N+ L Q ++ +A
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-ELKQRVLEQA 409
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKS 746
L F VNG DL++ + + + A A GL +L + II+RD+K
Sbjct: 95 RLYFVMEYVNGG--DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKL 149
Query: 747 SNILIDENFDAHLSDFGIARCIPTAMPHAST-FVLGTIGYIDPEYAHTSRLNEKSDVYSF 805
N+++D ++DFG+ C +T GT YI PE + D ++F
Sbjct: 150 DNVMLDSEGHIKIADFGM--CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 806 GIVLLEILTGKKAV--DNESNLHQLIMS 831
G++L E+L G+ ++E L Q IM
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 80 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 131
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +GT+ Y+ PE +S
Sbjct: 132 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 246
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 247 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 274
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGTIG 784
G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T +
Sbjct: 481 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ PE + + + KSDV+SFG+++ E +
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 727 GLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGTIG 784
G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T +
Sbjct: 482 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ PE + + + KSDV+SFG+++ E +
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 5/219 (2%)
Query: 250 GLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLT--GPIPPELGNMSKLSYLQ 307
G+ + L+L N+L + L+ KL L N L+ G + L YL
Sbjct: 25 GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84
Query: 308 LQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNIS-SCTALNQFNVHGNRLSGAIP 366
L N ++ T+ + LEQL L+ +NL+ ++ S L ++ A
Sbjct: 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 143
Query: 367 SSFRNLGSLTYLNLSRNNFKGK-VPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLT 425
F L SL L ++ N+F+ +P + NL LDLS P + L L
Sbjct: 144 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 203
Query: 426 LNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAE 464
LN+S N+ L + L S+Q +D S N + S E
Sbjct: 204 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 242
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 91/233 (39%), Gaps = 15/233 (6%)
Query: 163 LGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLT--GTIPDSIGNCTSFEILDISYNQITG 220
L L N L + +LT L + N L+ G S TS + LD+S+N +
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 92
Query: 221 EIPYNIGFLQVATLSLQGNKLTGKIPEVIGL-MQALAVLDLSENELVGPIPPILGNLSYT 279
+G Q+ L Q + L + L ++ L LD+S I LS
Sbjct: 93 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 152
Query: 280 GKLYLHGNKLTGPIPPEL-GNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLE 338
L + GN P++ + L++L L QL P L L LN++ NN
Sbjct: 153 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212
Query: 339 G--PIPHNISSCTALNQFNVHGNRLSGAIPSSFRNL----GSLTYLNLSRNNF 385
P+ LN V L+ + S + L SL +LNL++N+F
Sbjct: 213 SLDTFPYK-----CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 96 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 147
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +GT+ Y+ PE +S
Sbjct: 148 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 262
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 263 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 290
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 76 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 127
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +GT+ Y+ PE +S
Sbjct: 128 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 242
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 243 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 270
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHN------LREFETELETIGSIRHRNIVS 676
+G GA V+K + + +AVKK+++ + ++ RE E G H NIV+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG---HENIVN 73
Query: 677 LHGY--ALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
L A + L +DYM LH + L+ + + + + YLH
Sbjct: 74 LLNVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLH-- 126
Query: 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARC----------IPTAMPHAS-------- 776
+ ++HRD+K SNIL++ ++DFG++R IP ++ +
Sbjct: 127 -SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 777 --TFVLGTIGYIDPE-YAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQL 828
T + T Y PE +++ + D++S G +L EIL GK S ++QL
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 26/210 (12%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE----FETELETIGSIRHRNIVSLH 678
++G GA S V +K + + K+ N++ R F E + + + R I LH
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 679 GYALSPYGNL-LFYDYMVNGSLWDLLHGPSKKVKLD----WETRLKIAVGAAQGLAYLHH 733
+A L L +Y V G L LL +++ + + + +A+ + L Y
Sbjct: 128 -FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY--- 183
Query: 734 DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT 793
+HRD+K NIL+D L+DFG + S +GT Y+ PE
Sbjct: 184 ------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 794 -------SRLNEKSDVYSFGIVLLEILTGK 816
+ D ++ G+ E+ G+
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKS 746
L F VNG DL++ + + + A A GL +L + II+RD+K
Sbjct: 416 RLYFVMEYVNGG--DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKL 470
Query: 747 SNILIDENFDAHLSDFGIARCIPTAMPHAST-FVLGTIGYIDPEYAHTSRLNEKSDVYSF 805
N+++D ++DFG+ C +T GT YI PE + D ++F
Sbjct: 471 DNVMLDSEGHIKIADFGM--CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 806 GIVLLEILTGKKAV--DNESNLHQLIMS 831
G++L E+L G+ ++E L Q IM
Sbjct: 529 GVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 306 LQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAI 365
L LQ ++ QL EL+L +L+G +P + L + + N
Sbjct: 256 LNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLC 314
Query: 366 PSSFRNLGSLTYLNLSRNNFKGKVPTELG---RIINLDTLDLSVNNFSGSVPASI--GDL 420
S N SLT+L + R N K K+ +G ++ NL TLDLS N+ S S+ +L
Sbjct: 315 QISAANFPSLTHLYI-RGNVK-KLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNL 372
Query: 421 EHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIP 462
HL TLNLS N GL F ++ +D++F +L + P
Sbjct: 373 SHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAP 414
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 89/227 (39%), Gaps = 31/227 (13%)
Query: 207 SFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELV 266
+FE DI I+ + + + V +L+LQ ++ + L LDL+ L
Sbjct: 231 TFE--DIDDEDISSAMLKGLCEMSVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLK 288
Query: 267 GPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ 326
G +P + L+ KL L N N L++L ++ N V + +G LE+
Sbjct: 289 G-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGN--VKKLHLGVGCLEK 345
Query: 327 LFEL---NLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRN 383
L L +L+ N++E S C +L +NL L LNLS N
Sbjct: 346 LGNLQTLDLSHNDIEA------SDCCSL----------------QLKNLSHLQTLNLSHN 383
Query: 384 NFKGKVPTELGRIINLDTLDLSVNNFSGSVPAS-IGDLEHLLTLNLS 429
G L+ LDL+ + P S +L L LNL+
Sbjct: 384 EPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLT 430
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 30/210 (14%)
Query: 86 GSLVHIELSDNSLYGD--IPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLAR 143
G+L ++LS N + + L L+ LNL +N+ G + P L+ LDLA
Sbjct: 347 GNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAF 406
Query: 144 NQLTGEIPRLIYWN-EVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLT-GTIPDS 201
+L P+ + N LQ L L L + L L + +++GN+ GTI +
Sbjct: 407 TRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKT 466
Query: 202 --IGNCTSFEIL------------------------DISYNQITGEIPYNIGFLQVATLS 235
+ S E+L D+S+N +T + ++ L+ L+
Sbjct: 467 NLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGIYLN 526
Query: 236 LQGNKLTGKIPEVIGLMQALAVLDLSENEL 265
L N + P ++ ++ + ++LS N L
Sbjct: 527 LAANSINIISPRLLPILSQQSTINLSHNPL 556
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 163/422 (38%), Gaps = 41/422 (9%)
Query: 62 RNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELS--------------DNSLYGDIPFSIS 107
RNL+ +DFQ N + +++ + +++ L+ D++++ + F +
Sbjct: 150 RNLKVLDFQNNAIHYISREDMRSLEQAINLSLNFNGNNVKGIELGAFDSTIFQSLNFGGT 209
Query: 108 KLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRG 167
+ F L+N+ T I + D++ L G + + L L+
Sbjct: 210 PNLSVIFNGLQNSTTQSLWLGTFEDIDD---EDISSAMLKGLCEMSV------ESLNLQE 260
Query: 168 NALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIG 227
+ + + S T L D+ +L G +P + + L +S N +
Sbjct: 261 HRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAA 319
Query: 228 -FLQVATLSLQGNKLTGKIPEVIGLMQALA---VLDLSENELVGP--IPPILGNLSYTGK 281
F + L ++GN K+ +G ++ L LDLS N++ L NLS+
Sbjct: 320 NFPSLTHLYIRGN--VKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQT 377
Query: 282 LYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIP-AELGKLEQLFELNLADNNLEGP 340
L L N+ G +L L L +L P + L L LNL L+
Sbjct: 378 LNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTS 437
Query: 341 IPHNISSCTALNQFNVHGNRLS-GAIPSS--FRNLGSLTYLNLSRNNFKGKVPTELGRII 397
H ++ L N+ GN G I + + +GSL L LS +
Sbjct: 438 NQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLG 497
Query: 398 NLDTLDLSVNNFSGSVPASIGDLEHL--LTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFN 455
+ +DLS N+ + SI L HL + LNL+ N +N + P L TI++S N
Sbjct: 498 KMSHVDLSHNSLTCD---SIDSLSHLKGIYLNLAANSINIISPRLLPILSQQSTINLSHN 554
Query: 456 QL 457
L
Sbjct: 555 PL 556
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA V++ + + A K + + + E++T+ +RH +V+LH
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
++ Y++M G L++ + K+ D ++ +GL ++H + +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN---NYVHL 279
Query: 743 DVKSSNILIDENFDAHLS--DFGI-ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+K NI+ L DFG+ A P +T GT + PE A +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 336
Query: 800 SDVYSFGIVLLEILTG 815
+D++S G++ +L+G
Sbjct: 337 TDMWSVGVLSYILLSG 352
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 96 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 147
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +GT+ Y+ PE +S
Sbjct: 148 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 262
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 263 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 290
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V A+ Y + I K ++ H L TE + + RH + +L Y+
Sbjct: 26 LVKEKATGRYYAMKILKKEVIVAK---DEVAHTL----TENRVLQNSRHPFLTALK-YSF 77
Query: 683 SPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
+ L F +Y G L+ H ++V + R L YLH + N +++
Sbjct: 78 QTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARF-YGAEIVSALDYLHSEKN--VVY 132
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF--VLGTIGYIDPEYAHTSRLNEK 799
RD+K N+++D++ ++DFG+ + + +T GT Y+ PE +
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 800 SDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 190 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V A+ Y + I K ++ H L TE + + RH + +L Y+
Sbjct: 28 LVKEKATGRYYAMKILKKEVIVAK---DEVAHTL----TENRVLQNSRHPFLTALK-YSF 79
Query: 683 SPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
+ L F +Y G L+ H ++V + R L YLH + N +++
Sbjct: 80 QTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARF-YGAEIVSALDYLHSEKN--VVY 134
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF--VLGTIGYIDPEYAHTSRLNEK 799
RD+K N+++D++ ++DFG+ + + +T GT Y+ PE +
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 800 SDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 192 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 224
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+V A+ Y + I K ++ H L TE + + RH + +L Y+
Sbjct: 27 LVKEKATGRYYAMKILKKEVIVAK---DEVAHTL----TENRVLQNSRHPFLTALK-YSF 78
Query: 683 SPYGNLLF-YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIH 741
+ L F +Y G L+ H ++V + R L YLH + N +++
Sbjct: 79 QTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARF-YGAEIVSALDYLHSEKN--VVY 133
Query: 742 RDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF--VLGTIGYIDPEYAHTSRLNEK 799
RD+K N+++D++ ++DFG+ + + +T GT Y+ PE +
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 800 SDVYSFGIVLLEILTGKKAVDNESN--LHQLIM 830
D + G+V+ E++ G+ N+ + L +LI+
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 223
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 124 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 175
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +GT+ Y+ PE +S
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 290
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 291 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 318
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 624 VGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL 682
+G GA V++ + + A K + + + E++T+ +RH +V+LH
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 683 SPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHR 742
++ Y++M G L++ + K+ D ++ +GL ++H + +H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN---NYVHL 173
Query: 743 DVKSSNILIDENFDAHLS--DFGI-ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEK 799
D+K NI+ L DFG+ A P +T GT + PE A +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 230
Query: 800 SDVYSFGIVLLEILTG 815
+D++S G++ +L+G
Sbjct: 231 TDMWSVGVLSYILLSG 246
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 24/247 (9%)
Query: 639 NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVN 696
N + V K+ + R+F E + H N++ + G SP L +
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPY 93
Query: 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD 756
GSL+++LH + V +D +K A+ A+G A+L H P I + S ++ IDE+
Sbjct: 94 GSLYNVLHEGTNFV-VDQSQAVKFALDXARGXAFL-HTLEPLIPRHALNSRSVXIDEDXT 151
Query: 757 AHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
A +S + + +A +V PE T+R +D +SF ++L E++T
Sbjct: 152 ARISXADVKFSFQSPGRXYAPAWVAPEALQKKPE--DTNR--RSADXWSFAVLLWELVTR 207
Query: 816 KKAVDNESN--LHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSE 873
+ + SN + + + T+ + P VS +L +C P++
Sbjct: 208 EVPFADLSNXEIGXKVALEGLRPTIPPGISPHVS-------------KLXKICXNEDPAK 254
Query: 874 RPTMQEV 880
RP +
Sbjct: 255 RPKFDXI 261
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 77 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 128
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +GT+ Y+ PE +S
Sbjct: 129 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 188 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 243
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 244 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 271
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 174
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 225
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 226 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 42/236 (17%)
Query: 636 ALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN----LLFY 691
L + A+K++ + E + E + H NI+ L Y L G L
Sbjct: 50 GLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109
Query: 692 DYMVNGSLWDLLHGPSKKVKLDWETR-LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNIL 750
+ G+LW+ + K E + L + +G +GL +H HRD+K +NIL
Sbjct: 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNIL 166
Query: 751 IDENFDAHLSDFGIARCIPTAMPHASTFVLG---------------TIGYIDPEYAHTSR 795
+ + L D G +M A V G TI Y PE
Sbjct: 167 LGDEGQPVLMDLG-------SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219
Query: 796 ---LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848
++E++DV+S G VL ++ G+ D ++ K D +V AV ++S+
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPYD-------MVFQKGD--SVALAVQNQLSI 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 621 KYIVGYGASSTVYKCALKNS---RPI-AVKKLYNQYPHNLREFETELETIGSIRHRNIVS 676
K +G GA V+ ++S R I + K +Q P + + E E+E + S+ H NI+
Sbjct: 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP--MEQIEAEIEVLKSLDHPNIIK 84
Query: 677 LHGYALSPYGNLLFYDYMVNGS--LWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD 734
+ Y N+ G L ++ ++ L ++ LAY H
Sbjct: 85 IFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 735 CNPRIIHRDVKSSNILIDE---NFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYA 791
+ ++H+D+K NIL + + + DFG+A + ST GT Y+ PE
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS--DEHSTNAAGTALYMAPE-V 197
Query: 792 HTSRLNEKSDVYSFGIVLLEILTG 815
+ K D++S G+V+ +LTG
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 78 IPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLK 137
+ E+ +C L ++ D D+P +I+ LNL +NQL + T+ L
Sbjct: 14 VSHEVADCSHLKLTQVPD-----DLPTNIT------VLNLTHNQLRRLPAANFTRYSQLT 62
Query: 138 TLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGT 197
+LD+ N ++ P L +L+ L L+ N L+ + T L + N++
Sbjct: 63 SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 122
Query: 198 IPDSIGNCTSFEILDISYNQITG-EIPYNIGFLQVATLSLQGNKLTGKIPEVIGLM--QA 254
+ + LD+S+N ++ ++ + + L L NK+ E + + +
Sbjct: 123 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSS 182
Query: 255 LAVLDLSENELVGPIPPILGNLSYTGKLYLH----GNKLTGPIPPELGNMSKLSYLQLQN 310
L L+LS N++ P + L+L+ G LT + EL N S + L L N
Sbjct: 183 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTS-IRNLSLSN 241
Query: 311 NQLVGTIPAE-LG-KLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSS 368
+QL T LG K L L+L+ NNL + + L F + N + S
Sbjct: 242 SQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 301
Query: 369 FRNLGSLTYLNLSRNNFKGKV 389
L ++ YLNL R+ K +
Sbjct: 302 LHGLFNVRYLNLKRSFTKQSI 322
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 158/380 (41%), Gaps = 56/380 (14%)
Query: 105 SISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEI-----PRL----IY 155
S + L QLE+ L+ N + +L + N++ L+L R+ I P++
Sbjct: 277 SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQ 336
Query: 156 WNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISY 215
W + L++L + N + G+ S L L Y + N+ T S
Sbjct: 337 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL-SNSFT------------------SL 377
Query: 216 NQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENE----LVGPIPP 271
+T E ++ + L+L NK++ + + L VLDL NE L G
Sbjct: 378 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 437
Query: 272 ILGN-----LSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ 326
L N LSY L L N + P L + L + L+N V + P+ L
Sbjct: 438 GLENIFEIYLSYNKYLQLTRNSFA--LVPSLQRL-MLRRVALKN---VDSSPSPFQPLRN 491
Query: 327 LFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLS--------GAIPSSFRNLGSLTYL 378
L L+L++NN+ + L ++ N L+ G + L L L
Sbjct: 492 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 551
Query: 379 NLSRNNFKGKVPTELGR-IINLDTLDLSVNNFSGSVPASIGDLE-HLLTLNLSRNHLNGL 436
NL N F ++P E+ + + L +DL +NN ++PAS+ + + L +LNL +N + +
Sbjct: 552 NLESNGF-DEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQKNLITSV 609
Query: 437 LPAEFG-NLRSIQTIDMSFN 455
FG R++ +DM FN
Sbjct: 610 EKKVFGPAFRNLTELDMRFN 629
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 122/300 (40%), Gaps = 36/300 (12%)
Query: 104 FSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARN-----QLTGEIPRLIYWNE 158
FS LK LE LN+++N + G + T + NLK L L+ + LT E + +
Sbjct: 333 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET-FVSLAHS 391
Query: 159 VLQYLGLRGNALTGMLSPDMCQLTGLWYFDVR----GNNLTGTIPDSIGNCTSFEILDIS 214
L L L N ++ + S L L D+ G LTG + N FEI +S
Sbjct: 392 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI--FEIY-LS 448
Query: 215 YN---QITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPP 271
YN Q+T + LQ L K P ++ L +LDLS N +
Sbjct: 449 YNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 508
Query: 272 ILGNLSYTGKLYLHGNKLT---------GPIPPELGNMSKLSYLQLQNNQLVGTIPAELG 322
+L L L L N L GPI L +S L L L++N IP E+
Sbjct: 509 MLEGLEKLEILDLQHNNLARLWKHANPGGPI-YFLKGLSHLHILNLESNGF-DEIPVEVF 566
Query: 323 KLEQLFELNLAD------NNLEGPIPHNISSCTALN-QFNVHGNRLSGAIPSSFRNLGSL 375
K LFEL + D N L + +N S +LN Q N+ + +FRNL L
Sbjct: 567 K--DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 624
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 201
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 252
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 253 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 279
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 226
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 277
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 278 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 304
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 124 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 175
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +GT+ Y+ PE +S
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 290
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 291 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 318
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 206
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 257
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 258 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 207
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 258
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 259 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 207
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 258
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 259 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 285
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 221
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 272
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 273 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 299
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 78 IPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLK 137
+ E+ +C L ++ D D+P +I+ LNL +NQL + T+ L
Sbjct: 9 VSHEVADCSHLKLTQVPD-----DLPTNIT------VLNLTHNQLRRLPAANFTRYSQLT 57
Query: 138 TLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGT 197
+LD+ N ++ P L +L+ L L+ N L+ + T L + N++
Sbjct: 58 SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 117
Query: 198 IPDSIGNCTSFEILDISYNQITG-EIPYNIGFLQVATLSLQGNKLTGKIPEVIGLM--QA 254
+ + LD+S+N ++ ++ + + L L NK+ E + + +
Sbjct: 118 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSS 177
Query: 255 LAVLDLSENELVGPIPPILGNLSYTGKLYLH----GNKLTGPIPPELGNMSKLSYLQLQN 310
L L+LS N++ P + L+L+ G LT + EL N S + L L N
Sbjct: 178 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTS-IRNLSLSN 236
Query: 311 NQLVGTIPAE-LG-KLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSS 368
+QL T LG K L L+L+ NNL + + L F + N + S
Sbjct: 237 SQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 296
Query: 369 FRNLGSLTYLNLSRNNFKGKV 389
L ++ YLNL R+ K +
Sbjct: 297 LHGLFNVRYLNLKRSFTKQSI 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 158/380 (41%), Gaps = 56/380 (14%)
Query: 105 SISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEI-----PRL----IY 155
S + L QLE+ L+ N + +L + N++ L+L R+ I P++
Sbjct: 272 SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQ 331
Query: 156 WNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISY 215
W + L++L + N + G+ S L L Y + N+ T S
Sbjct: 332 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL-SNSFT------------------SL 372
Query: 216 NQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENE----LVGPIPP 271
+T E ++ + L+L NK++ + + L VLDL NE L G
Sbjct: 373 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 432
Query: 272 ILGN-----LSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ 326
L N LSY L L N + P L + L + L+N V + P+ L
Sbjct: 433 GLENIFEIYLSYNKYLQLTRNSFA--LVPSLQRL-MLRRVALKN---VDSSPSPFQPLRN 486
Query: 327 LFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLS--------GAIPSSFRNLGSLTYL 378
L L+L++NN+ + L ++ N L+ G + L L L
Sbjct: 487 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 546
Query: 379 NLSRNNFKGKVPTELGR-IINLDTLDLSVNNFSGSVPASIGDLE-HLLTLNLSRNHLNGL 436
NL N F ++P E+ + + L +DL +NN ++PAS+ + + L +LNL +N + +
Sbjct: 547 NLESNGF-DEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQKNLITSV 604
Query: 437 LPAEFG-NLRSIQTIDMSFN 455
FG R++ +DM FN
Sbjct: 605 EKKVFGPAFRNLTELDMRFN 624
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 122/300 (40%), Gaps = 36/300 (12%)
Query: 104 FSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARN-----QLTGEIPRLIYWNE 158
FS LK LE LN+++N + G + T + NLK L L+ + LT E + +
Sbjct: 328 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET-FVSLAHS 386
Query: 159 VLQYLGLRGNALTGMLSPDMCQLTGLWYFDVR----GNNLTGTIPDSIGNCTSFEILDIS 214
L L L N ++ + S L L D+ G LTG + N FEI +S
Sbjct: 387 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI--FEIY-LS 443
Query: 215 YN---QITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPP 271
YN Q+T + LQ L K P ++ L +LDLS N +
Sbjct: 444 YNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 503
Query: 272 ILGNLSYTGKLYLHGNKLT---------GPIPPELGNMSKLSYLQLQNNQLVGTIPAELG 322
+L L L L N L GPI L +S L L L++N IP E+
Sbjct: 504 MLEGLEKLEILDLQHNNLARLWKHANPGGPI-YFLKGLSHLHILNLESNGF-DEIPVEVF 561
Query: 323 KLEQLFELNLAD------NNLEGPIPHNISSCTALN-QFNVHGNRLSGAIPSSFRNLGSL 375
K LFEL + D N L + +N S +LN Q N+ + +FRNL L
Sbjct: 562 K--DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 619
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 194
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 245
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 246 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 193
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 244
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 245 ---RVSXECQ---------HLIRWCLALRPSDRPTFEEI 271
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 179
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 230
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 231 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 257
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 78 IPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLK 137
+ E+ +C L ++ D D+P +I+ LNL +NQL + T+ L
Sbjct: 4 VSHEVADCSHLKLTQVPD-----DLPTNIT------VLNLTHNQLRRLPAANFTRYSQLT 52
Query: 138 TLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGT 197
+LD+ N ++ P L +L+ L L+ N L+ + T L + N++
Sbjct: 53 SLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 112
Query: 198 IPDSIGNCTSFEILDISYNQITG-EIPYNIGFLQVATLSLQGNKLTGKIPEVIGLM--QA 254
+ + LD+S+N ++ ++ + + L L NK+ E + + +
Sbjct: 113 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSS 172
Query: 255 LAVLDLSENELVGPIPPILGNLSYTGKLYLH----GNKLTGPIPPELGNMSKLSYLQLQN 310
L L+LS N++ P + L+L+ G LT + EL N S + L L N
Sbjct: 173 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTS-IRNLSLSN 231
Query: 311 NQLVGTIPAE-LG-KLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSS 368
+QL T LG K L L+L+ NNL + + L F + N + S
Sbjct: 232 SQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 291
Query: 369 FRNLGSLTYLNLSRNNFKGKV 389
L ++ YLNL R+ K +
Sbjct: 292 LHGLFNVRYLNLKRSFTKQSI 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 158/380 (41%), Gaps = 56/380 (14%)
Query: 105 SISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEI-----PRL----IY 155
S + L QLE+ L+ N + +L + N++ L+L R+ I P++
Sbjct: 267 SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQ 326
Query: 156 WNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISY 215
W + L++L + N + G+ S L L Y + N+ T S
Sbjct: 327 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSL-SNSFT------------------SL 367
Query: 216 NQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENE----LVGPIPP 271
+T E ++ + L+L NK++ + + L VLDL NE L G
Sbjct: 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 427
Query: 272 ILGN-----LSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ 326
L N LSY L L N + P L + L + L+N V + P+ L
Sbjct: 428 GLENIFEIYLSYNKYLQLTRNSFA--LVPSLQRL-MLRRVALKN---VDSSPSPFQPLRN 481
Query: 327 LFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLS--------GAIPSSFRNLGSLTYL 378
L L+L++NN+ + L ++ N L+ G + L L L
Sbjct: 482 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541
Query: 379 NLSRNNFKGKVPTELGR-IINLDTLDLSVNNFSGSVPASIGDLE-HLLTLNLSRNHLNGL 436
NL N F ++P E+ + + L +DL +NN ++PAS+ + + L +LNL +N + +
Sbjct: 542 NLESNGF-DEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQKNLITSV 599
Query: 437 LPAEFG-NLRSIQTIDMSFN 455
FG R++ +DM FN
Sbjct: 600 EKKVFGPAFRNLTELDMRFN 619
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 122/300 (40%), Gaps = 36/300 (12%)
Query: 104 FSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARN-----QLTGEIPRLIYWNE 158
FS LK LE LN+++N + G + T + NLK L L+ + LT E + +
Sbjct: 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET-FVSLAHS 381
Query: 159 VLQYLGLRGNALTGMLSPDMCQLTGLWYFDVR----GNNLTGTIPDSIGNCTSFEILDIS 214
L L L N ++ + S L L D+ G LTG + N FEI +S
Sbjct: 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI--FEIY-LS 438
Query: 215 YN---QITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPP 271
YN Q+T + LQ L K P ++ L +LDLS N +
Sbjct: 439 YNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 498
Query: 272 ILGNLSYTGKLYLHGNKLT---------GPIPPELGNMSKLSYLQLQNNQLVGTIPAELG 322
+L L L L N L GPI L +S L L L++N IP E+
Sbjct: 499 MLEGLEKLEILDLQHNNLARLWKHANPGGPI-YFLKGLSHLHILNLESNGF-DEIPVEVF 556
Query: 323 KLEQLFELNLAD------NNLEGPIPHNISSCTALN-QFNVHGNRLSGAIPSSFRNLGSL 375
K LFEL + D N L + +N S +LN Q N+ + +FRNL L
Sbjct: 557 K--DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 174
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 225
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 226 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 221
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 272
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 273 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 299
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 194
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 245
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 246 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 272
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 174
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 225
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 226 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 252
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 193
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 244
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 245 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 271
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 177
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 228
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 229 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 255
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 213
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 264
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 265 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 206
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 257
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 258 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 206
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 257
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 258 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 284
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 178
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 229
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 230 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 179
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 230
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 231 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 257
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 207
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 258
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 259 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 285
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 179
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 230
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 231 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 257
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 207
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ--------- 258
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 259 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 285
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 206
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 257
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 258 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 284
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 178
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 229
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 230 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 256
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + A T+ L GT Y+
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWTLCGTPEYL 226
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 668 SIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQG 727
S+RH NIV L+P + +Y G L++ + + + + + + G
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS---G 128
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS--DFGIARCIPTAMPHASTFVLGTIGY 785
++Y H + +I HRD+K N L+D + L DFG ++ + + +GT Y
Sbjct: 129 VSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTVGTPAY 183
Query: 786 IDPEYAHTSRLNEK-SDVYSFGIVLLEILTG 815
I PE + K +DV+S G+ L +L G
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 221
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 272
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C PS+RPT +E+
Sbjct: 273 ---RVSSECQ---------HLIRWCLALRPSDRPTFEEI 299
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T
Sbjct: 115 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 172 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 207
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T
Sbjct: 127 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T
Sbjct: 137 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T
Sbjct: 137 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T
Sbjct: 117 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T
Sbjct: 121 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH--ASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + A T
Sbjct: 135 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 192 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 227
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 211 LDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIP 270
L++ NQIT P ++ L L GN L K I +Q++ LDL+ ++ P
Sbjct: 74 LELKDNQITDLTPLK-NLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQITDVTP 130
Query: 271 PILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFEL 330
L LS LYL N++T P L ++ L YL + NNQ+ P L L +L L
Sbjct: 131 --LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTP--LANLSKLTTL 184
Query: 331 NLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLS 381
DN + P ++S L + ++ N++S P NL +L + L+
Sbjct: 185 RADDNKISDISP--LASLPNLIEVHLKDNQISDVSP--LANLSNLFIVTLT 231
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 88 LVHIELSDNSLYGDIPF-SISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQL 146
L+ +EL DN + P +++K+ +LE L N L S + + ++KTLDL Q+
Sbjct: 71 LIGLELKDNQITDLTPLKNLTKITELE---LSGNPLKNV--SAIAGLQSIKTLDLTSTQI 125
Query: 147 TGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCT 206
T P N LQ L L N +T + SP + LT L Y + N + P + N +
Sbjct: 126 TDVTPLAGLSN--LQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNNQVNDLTP--LANLS 179
Query: 207 SFEILDISYNQITGEIP 223
L N+I+ P
Sbjct: 180 KLTTLRADDNKISDISP 196
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LIDE ++DFG A+ + T+ L GT Y+
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 192
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH 733
+++LH + +L +Y G ++ L P + +++ +G+ YLH
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLC-LPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 734 DCNPRIIHRDVKSSNILIDENF---DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEY 790
+ I+H D+K NIL+ + D + DFG++R I A ++GT Y+ PE
Sbjct: 150 N---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE--IMGTPEYLAPEI 204
Query: 791 AHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN 824
+ + +D+++ GI+ +LT E N
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT--AMPHASTFVLGT 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + A T
Sbjct: 121 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + KSDV+SFG+++ E + G+K
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
ETE+E + + H I+ + + + + M G L+D + G + + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCI-PTAMPHA 775
+ A Q YLH + IIHRD+K N+L+ +E+ ++DFG ++ + T++
Sbjct: 122 QMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 776 STFVLGTIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTG 815
+ GT Y+ PE T+ N D +S G++L L+G
Sbjct: 176 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
ETE+E + + H I+ + + + + M G L+D + G + + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCI-PTAMPHA 775
+ A Q YLH + IIHRD+K N+L+ +E+ ++DFG ++ + T++
Sbjct: 122 QMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 776 STFVLGTIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTG 815
+ GT Y+ PE T+ N D +S G++L L+G
Sbjct: 176 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
ETE+E + + H I+ + + + + M G L+D + G + + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCI-PTAMPHA 775
+ A Q YLH + IIHRD+K N+L+ +E+ ++DFG ++ + T++
Sbjct: 122 QMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 776 STFVLGTIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTG 815
+ GT Y+ PE T+ N D +S G++L L+G
Sbjct: 176 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG--- 781
A+G+A+L + IHRD+ + NIL+ + DFG+AR I + S +V+
Sbjct: 178 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHI----KNDSNYVVKGNA 230
Query: 782 --TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL----TGKKAVDNESNLHQLIMSKADD 835
+ ++ PE +SDV+S+GI L E+ + + +S +++I
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG--- 287
Query: 836 NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ PE A + + + C P +RPT +++ +
Sbjct: 288 ---FRMLSPE--------HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG--- 781
A+G+A+L + IHRD+ + NIL+ + DFG+AR I + S +V+
Sbjct: 171 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNA 223
Query: 782 --TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ ++ PE +SDV+S+GI L E+ +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
ETE+E + + H I+ + + + + M G L+D + G + + +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCI-PTAMPHA 775
+ A Q YLH + IIHRD+K N+L+ +E+ ++DFG ++ + T++
Sbjct: 121 QMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 174
Query: 776 STFVLGTIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTG 815
+ GT Y+ PE T+ N D +S G++L L+G
Sbjct: 175 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
ETE+E + + H I+ + + + + M G L+D + G + + +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 720 IAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCI-PTAMPHA 775
+ A Q YLH + IIHRD+K N+L+ +E+ ++DFG ++ + T++
Sbjct: 128 QMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 181
Query: 776 STFVLGTIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTG 815
+ GT Y+ PE T+ N D +S G++L L+G
Sbjct: 182 ---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 46/279 (16%)
Query: 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LREFETELETIGSIRHRN--IVSLHG 679
+G G SS V++ + + A+K + + N L + E+ + ++ + I+ L+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLD-WETRLKIAVGAAQGLAYLHHDCNPR 738
Y ++ + Y M G++ DL KK +D WE R + + +H
Sbjct: 124 YEIT---DQYIYMVMECGNI-DLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHG--- 175
Query: 739 IIHRDVKSSNILIDENFDAHLSDFGIARCI-PTAMPHASTFVLGTIGYIDPEYAH---TS 794
I+H D+K +N LI + L DFGIA + P +G + Y+ PE +S
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 795 RLN--------EKSDVYSFGIVLLEILTGK----KAVDNESNLHQLIMSKADDNTVMEAV 842
R N KSDV+S G +L + GK + ++ S LH +I D N +E
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII----DPNHEIEFP 290
Query: 843 D-PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
D PE DL V K C KR P +R ++ E+
Sbjct: 291 DIPE-----KDLQDVLKC------CLKRDPKQRISIPEL 318
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 28/159 (17%)
Query: 726 QGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAMPHASTFVLGTIG 784
Q L + H N ++HRD+K NILID N + L DFG + + T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRV 194
Query: 785 YIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEA 841
Y PE+ R + +S V+S GI+L +++ G +++ + Q+ +
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ--------- 245
Query: 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEV 880
VS C L C P +RPT +E+
Sbjct: 246 ---RVSXECQ---------HLIRWCLALRPXDRPTFEEI 272
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG--- 781
A+G+A+L + IHRD+ + NIL+ + DFG+AR I + S +V+
Sbjct: 178 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNA 230
Query: 782 --TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ ++ PE +SDV+S+GI L E+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
ETE+E + + H I+ + + + + M G L+D + G +K++K E K
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG-NKRLK---EATCK 256
Query: 720 IAV-GAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCI-PTAMPH 774
+ + YLH + IIHRD+K N+L+ +E+ ++DFG ++ + T++
Sbjct: 257 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 313
Query: 775 ASTFVLGTIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTG 815
+ GT Y+ PE T+ N D +S G++L L+G
Sbjct: 314 T---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG--- 781
A+G+A+L + IHRD+ + NIL+ + DFG+AR I + S +V+
Sbjct: 173 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNA 225
Query: 782 --TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814
+ ++ PE +SDV+S+GI L E+ +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 660 ETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLK 719
ETE+E + + H I+ + + + + M G L+D + G +K++K E K
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG-NKRLK---EATCK 242
Query: 720 IAV-GAAQGLAYLHHDCNPRIIHRDVKSSNILI---DENFDAHLSDFGIARCI-PTAMPH 774
+ + YLH + IIHRD+K N+L+ +E+ ++DFG ++ + T++
Sbjct: 243 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
Query: 775 ASTFVLGTIGYIDPEY---AHTSRLNEKSDVYSFGIVLLEILTG 815
+ GT Y+ PE T+ N D +S G++L L+G
Sbjct: 300 T---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYL 206
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 662 ELETIGSIRHRNIVSLHGYALSPYGN--LLFYDYMVNGSLWDLL--HGPSKK----VKLD 713
E+ + ++H N++SL LS L +DY LW ++ H SK V+L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLP 126
Query: 714 WETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI----DENFDAHLSDFGIARCIP 769
+ G+ YLH + ++HRD+K +NIL+ E ++D G AR
Sbjct: 127 RGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 770 TAMPHASTF--VLGTIGYIDPEYAHTSRLNEKS-DVYSFGIVLLEILTGK 816
+ + + V+ T Y PE +R K+ D+++ G + E+LT +
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 30/167 (17%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG--- 781
A+G+A+L + IHRD+ + NIL+ + DFG+AR I + S +V+
Sbjct: 155 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI----KNDSNYVVKGNA 207
Query: 782 --TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKA----VDNESNLHQLIMSKADD 835
+ ++ PE +SDV+S+GI L E+ + + + +S +++I
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG--- 264
Query: 836 NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVAR 882
+ PE A + + + C P +RPT +++ +
Sbjct: 265 ---FRMLSPE--------HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 725 AQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGT-- 782
+ G+ YL +HRD+ + N+L+ A +SDFG+++ + + + G
Sbjct: 120 SMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 176
Query: 783 IGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKK 817
+ + PE + + + +SDV+S+G+ + E L+ G+K
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 212
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 140 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYL 191
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 668 SIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQG 727
S+RH NIV L+P + +Y G L++ + + + + + + G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 127
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHL--SDFGIARCIPTAMPHASTFVLGTIGY 785
++Y H ++ HRD+K N L+D + L +DFG ++ + + +GT Y
Sbjct: 128 VSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA--SVLHSQPKSAVGTPAY 182
Query: 786 IDPEYAHTSRLNEK-SDVYSFGIVLLEILTG 815
I PE + K +DV+S G+ L +L G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 54/287 (18%)
Query: 195 TGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQA 254
TGT + +C++ I + E+P +I + L+LQ N + + ++
Sbjct: 2 TGTSCPAACSCSNQASRVICTRRELAEVPASIP-VNTRYLNLQENSIQVIRTDTFKHLRH 60
Query: 255 LAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLV 314
L +L LS+N + L L L N+LT +SKL L L+NN +
Sbjct: 61 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNP-I 119
Query: 315 GTIPA------------ELGKLEQL-------FE-------LNLADNNLEGPIPHNISSC 348
+IP+ +LG+L++L FE LNL NL+ IP N+++
Sbjct: 120 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKD-IP-NLTAL 177
Query: 349 TALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNN 408
L + + GNRL P SF+ L SL L L +V T I + D
Sbjct: 178 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWL----MHAQVAT-----IERNAFD----- 223
Query: 409 FSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFN 455
DL+ L LNLS N+L L F L ++ + ++ N
Sbjct: 224 ----------DLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 17/171 (9%)
Query: 57 SIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLN 116
+ LR+L+ + N + SL +EL DN L + L +L L
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELW 113
Query: 117 LKNNQLTGPIPS-TLTQIPNLKTLDLARNQLTGEIPRLIYWNEV-------LQYLGLRGN 168
L+NN + IPS ++P+L+ LDL GE+ RL Y +E L+YL L
Sbjct: 114 LRNNPIES-IPSYAFNRVPSLRRLDL------GELKRLEYISEAAFEGLVNLRYLNLGMC 166
Query: 169 ALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQIT 219
L + P++ L L ++ GN L P S TS L + + Q+
Sbjct: 167 NLKDI--PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 215
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 49/256 (19%)
Query: 90 HIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGE 149
++ L +NS+ + L+ LE L L N + +P+L TL+L N+LT
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 98
Query: 150 IPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFE 209
+ + L+ L LR N + + S ++ L D +G E
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD-------------LGELKRLE 145
Query: 210 ILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPI 269
IS G + N+ +L + +L+ IP + L++ L L+LS
Sbjct: 146 Y--ISEAAFEGLV--NLRYLNLGMCNLKD------IPNLTALVR-LEELELS-------- 186
Query: 270 PPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFE 329
GN+L P ++ L L L + Q+ L+ L E
Sbjct: 187 ----------------GNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEE 230
Query: 330 LNLADNNLEGPIPHNI 345
LNL+ NNL +PH++
Sbjct: 231 LNLSHNNLMS-LPHDL 245
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 206
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 206
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 200
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLXGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 668 SIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQG 727
S+RH NIV L+P + +Y G L++ + + + + + + G
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 127
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS--DFGIARCIPTAMPHASTFVLGTIGY 785
++Y H ++ HRD+K N L+D + L DFG ++ + + +GT Y
Sbjct: 128 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTVGTPAY 182
Query: 786 IDPEYAHTSRLNEK-SDVYSFGIVLLEILTG 815
I PE + K +DV+S G+ L +L G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL-GTIGYI 786
YLH + +I+RD+K N+LID+ ++DFG A+ + T+ L GT Y+
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYL 205
Query: 787 DPEYAHTSRLNEKSDVYSFGIVLLEILTG 815
PE + N+ D ++ G+++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 668 SIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQG 727
S+RH NIV L+P + +Y G L++ + + + + + + G
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---G 126
Query: 728 LAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS--DFGIARCIPTAMPHASTFVLGTIGY 785
++Y H ++ HRD+K N L+D + L DFG ++ + + +GT Y
Sbjct: 127 VSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS--SVLHSQPKSTVGTPAY 181
Query: 786 IDPEYAHTSRLNEK-SDVYSFGIVLLEILTG 815
I PE + K +DV+S G+ L +L G
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
Query: 306 LQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAI 365
L LQ+ L A L +L LNL N L+ T L + N+L+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 366 PSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGD-LEHLL 424
F +L L L L N K R+ L L L+ N S+PA D L +L
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQ 158
Query: 425 TLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGS 460
TL+LS N L + F L +QTI + NQ S
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 227 GFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHG 286
G ++ L+L N+L V + L L L+ N+L + +L+ KLYL G
Sbjct: 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116
Query: 287 NKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPH 343
N+L ++KL L+L NQL KL L L+L+ N L+ +PH
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH 172
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 279 TGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLE 338
T KL L L ++KL++L L NQL L +L L LA+N L
Sbjct: 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL- 95
Query: 339 GPIPHNI-SSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRII 397
+P + T L++ + GN+L F L L L L+ N + ++
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155
Query: 398 NLDTLDLSVNNFSGSVPASIGD-LEHLLTLNLSRNHLN 434
NL TL LS N SVP D L L T+ L N +
Sbjct: 156 NLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFD 192
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 109 LKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWN-EVLQYLGLRG 167
L +L +LNL NQL + L TL LA NQL +P ++ + L L L G
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 168 NALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPY--- 224
N L + S +LT L + N L + T+ + L +S NQ+ +P+
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAF 175
Query: 225 -NIGFLQVATLSLQGNKLTGKIPEVIGLMQ 253
+G LQ T++L GN+ E++ L Q
Sbjct: 176 DRLGKLQ--TITLFGNQFDCSRCEILYLSQ 203
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%)
Query: 252 MQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNN 311
+ L L+L N+L + +L+ G L L N+L ++++L L L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 312 QLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRN 371
QL +L +L EL L N L+ T L ++ N+L +F
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDR 177
Query: 372 LGSLTYLNLSRNNF 385
LG L + L N F
Sbjct: 178 LGKLQTITLFGNQF 191
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,358,170
Number of Sequences: 62578
Number of extensions: 1014015
Number of successful extensions: 5217
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 2190
Number of HSP's gapped (non-prelim): 1688
length of query: 943
length of database: 14,973,337
effective HSP length: 108
effective length of query: 835
effective length of database: 8,214,913
effective search space: 6859452355
effective search space used: 6859452355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)